-- dump date 20140620_013345 -- class Genbank::CDS -- table cds_note -- id note NP_742171.1 identified by match to PFAM protein family HMM PF02195 NP_742172.1 similar to GB:V00540, GB:J00212, GB:M12350, GB:M28586, GB:M10201, SP:P01568, SP:P05014, PID:184655, PID:306905, PID:306906, PID:306912, PID:32717, PID:32725, PID:758078, and PID:825603; identified by sequence similarity NP_742173.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA NP_742174.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs NP_742175.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE NP_742176.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria NP_742177.1 similar to GB:L11566, SP:Q07020, PID:337493, GB:L11566, SP:Q07020, and PID:337493; identified by sequence similarity NP_742178.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates NP_742179.1 in Escherichia coli transcription of this gene is enhanced by polyamines NP_742180.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. NP_742181.1 binds the polymerase to DNA and acts as a sliding clamp NP_742182.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA NP_742183.1 negatively supercoils closed circular double-stranded DNA NP_742184.1 similar to GP:11071900; identified by sequence similarity NP_742194.1 identified by match to PFAM protein family HMM PF02418 NP_742196.1 similar to SP:P13512; identified by sequence similarity NP_742198.1 similar to GP:12484570; identified by sequence similarity NP_742199.1 identified by match to TIGR protein family HMM TIGR01387 NP_742200.1 identified by match to TIGR protein family HMM TIGR01386 NP_742203.1 identified by match to PFAM protein family HMM PF02366 NP_742204.1 identified by match to PFAM protein family HMM PF00535 NP_742205.1 similar to SP:Q06206, GB:Z21940, and PID:287738; identified by sequence similarity NP_742206.1 identified by match to PFAM protein family HMM PF03466 NP_742207.1 similar to GB:X63597, GB:M22616, SP:P14410, PID:338090, and PID:36645; identified by sequence similarity NP_742211.1 similar to GB:U13922, PID:549844, GB:J04456, GB:M57678, GB:D28452, GB:X15256, GB:X14829, GB:S44881, SP:P05163, SP:P09382, PID:184228, PID:23239, PID:307122, and PID:34343; identified by sequence similarity NP_742212.1 similar to GP:12484570; identified by sequence similarity NP_742213.1 identified by match to PFAM protein family HMM PF04295 NP_742214.1 identified by match to TIGR protein family HMM TIGR01730 NP_742215.1 similar to SP:P13509; identified by sequence similarity NP_742216.1 similar to GP:2645844; identified by sequence similarity NP_742217.1 identified by match to TIGR protein family HMM TIGR01387 NP_742220.1 similar to GP:15074850; identified by sequence similarity NP_742221.1 identified by match to PFAM protein family HMM PF02954 NP_742222.1 identified by match to PFAM protein family HMM PF00753 NP_742223.1 similar to GP:9948381; identified by sequence similarity NP_742224.1 similar to GP:9949599, and GP:9949599; identified by sequence similarity NP_742225.1 identified by match to PFAM protein family HMM PF03466 NP_742226.1 identified by match to PFAM protein family HMM PF00732 NP_742227.1 identified by match to PFAM protein family HMM PF00083 NP_742228.1 similar to GP:11120074; identified by sequence similarity NP_742229.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate NP_742230.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_742231.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_742232.1 similar to SP:P05100; identified by sequence similarity NP_742233.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA NP_742234.1 similar to GP:9945834; identified by sequence similarity NP_742235.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain NP_742236.1 identified by match to PFAM protein family HMM PF01189 NP_742237.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth NP_742238.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) NP_742239.1 similar to GP:9945840, GB:L29642, and PID:461402; identified by sequence similarity NP_742240.1 identified by match to TIGR protein family HMM TIGR00057 NP_742242.1 identified by match to TIGR protein family HMM TIGR01751 NP_742243.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis NP_742244.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate NP_742245.1 identified by match to PFAM protein family HMM PF04235 NP_742246.1 similar to GP:9945850; identified by sequence similarity NP_742247.1 similar to SP:O69787; identified by sequence similarity NP_742249.1 identified by match to PFAM protein family HMM PF03466 NP_742250.1 similar to GP:9948196; identified by sequence similarity NP_742251.1 similar to SP:P56739; identified by sequence similarity NP_742252.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis NP_742253.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate NP_742254.1 similar to GB:X13589, GB:Y07508, GB:M22246, GB:S85356, GB:M74714, GB:J04127, GB:M30795, GB:M30796, GB:M30797, GB:M30798, GB:M30799, GB:M30800, GB:M30801, GB:M30802, GB:M30803, GB:M30804, GB:M18856, GB:M28420, GB:S58866, GB:S85075, GB:S52793, GB:M32245, GB:X55983, GB:D14473, GB:S67206, GB:L21982, GB:S52789, SP:P11511, GB:X13589, GB:Y07508, GB:M22246, GB:S85356, GB:M74714, GB:J04127, GB:M30795, GB:M30796, GB:M30797, GB:M30798, GB:M30799, GB:M30800, GB:M30801, GB:M30802, GB:M30803, GB:M30804, GB:M18856, GB:M28420, GB:S58866, GB:S85075, GB:S52793, GB:M32245, GB:X55983, GB:D14473, GB:S67206, GB:L21982, GB:S52789, and SP:P11511; identified by sequence similarity NP_742255.1 similar to GB:L05186, GB:L13616, SP:Q05397, PID:439875, GB:L05186, GB:L13616, SP:Q05397, and PID:439875; identified by sequence similarity NP_742256.1 similar to GP:9945859; identified by sequence similarity NP_742257.1 similar to GP:9945860; identified by sequence similarity NP_742258.1 identified by match to PFAM protein family HMM PF00296 NP_742259.1 similar to SP:P23929; identified by sequence similarity NP_742263.1 similar to GP:9945887; identified by sequence similarity NP_742264.1 identified by match to TIGR protein family HMM TIGR01454 NP_742265.1 similar to GP:9945890; identified by sequence similarity NP_742266.1 similar to GB:X51956, GB:M22349, GB:X13120, GB:X14327, SP:P06733, SP:P09104, SP:P13929, SP:Q05524, PID:1732416, PID:182116, PID:182118, PID:31165, PID:693933, PID:930063, and PID:930101; identified by sequence similarity NP_742267.1 similar to GP:9945892, and GP:9945892; identified by sequence similarity NP_742268.1 similar to GB:U20657, and SP:Q13107; identified by sequence similarity NP_742269.1 identified by match to PFAM protein family HMM PF04055 NP_742270.1 identified by match to PFAM protein family HMM PF00484 NP_742271.1 identified by match to PFAM protein family HMM PF04172 NP_742272.1 similar to GP:9945931; identified by sequence similarity NP_742273.1 identified by match to PFAM protein family HMM PF00034 NP_742274.1 identified by match to TIGR protein family HMM TIGR00780 NP_742275.1 involved in the insertion of copper into subunit I of cytochrome C oxidase NP_742276.1 identified by match to PFAM protein family HMM PF04238 NP_742278.1 similar to GP:9945938; identified by sequence similarity NP_742279.1 similar to GP:9945939; identified by sequence similarity NP_742280.1 converts protoheme IX and farnesyl diphosphate to heme O NP_742281.1 identified by match to PFAM protein family HMM PF00578 NP_742282.1 identified by match to PFAM protein family HMM PF03180 NP_742283.1 identified by match to TIGR protein family HMM TIGR01726 NP_742284.1 part of the metNIQ transport system for methionine NP_742285.1 Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide NP_742286.1 similar to GP:9951837; identified by sequence similarity NP_742287.1 identified by match to PFAM protein family HMM PF01032 NP_742288.1 identified by match to TIGR protein family HMM TIGR00968 NP_742289.1 similar to GP:9951834; identified by sequence similarity NP_742290.1 similar to SP:P18840, PID:145279, GB:U00096, PID:1742878, and PID:1788065; identified by sequence similarity NP_742291.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine NP_742293.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair NP_742294.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential NP_742295.1 similar to GP:9951825; identified by sequence similarity NP_742296.1 similar to GB:M25322, GB:M60218, GB:M60219, GB:M60222, GB:M60223, GB:M60224, GB:M60225, GB:M60226, GB:M60227, GB:M60228, GB:M60229, GB:M60230, GB:M60231, GB:M60232, GB:M60233, GB:M60234, GB:M60235, SP:P16109, PID:183389, and PID:183391; identified by sequence similarity NP_742297.1 similar to GP:2707768; identified by sequence similarity NP_742298.1 identified by match to PFAM protein family HMM PF03372 NP_742299.1 identified by match to PFAM protein family HMM PF04156 NP_742300.1 identified by match to PFAM protein family HMM PF01510 NP_742301.1 identified by match to PFAM protein family HMM PF00563 NP_742302.1 identified by match to PFAM protein family HMM PF00512 NP_742303.1 similar to GB:X12966, GB:X14813, GB:X65140, SP:P09110, PID:1340140, PID:23874, PID:23876, PID:825617, GB:X12966, GB:X14813, GB:X65140, SP:P09110, PID:1340140, PID:23874, PID:23876, and PID:825617; identified by sequence similarity NP_742304.1 similar to GB:M18731, and PID:182949; identified by sequence similarity NP_742306.1 similar to GP:9950084; identified by sequence similarity NP_742307.1 carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system NP_742308.1 identified by match to PFAM protein family HMM PF04291 NP_742309.1 identified by match to PFAM protein family HMM PF03550 NP_742310.1 identified by match to TIGR protein family HMM TIGR00996 NP_742311.1 identified by match to TIGR protein family HMM TIGR00968 NP_742312.1 identified by match to PFAM protein family HMM PF02405 NP_742313.1 similar to GP:9951810; identified by sequence similarity NP_742314.1 identified by match to PFAM protein family HMM PF00675 NP_742315.1 identified by match to PFAM protein family HMM PF04284 NP_742316.1 identified by match to PFAM protein family HMM PF03741 NP_742317.1 identified by match to PFAM protein family HMM PF03600 NP_742319.1 similar to GP:9951796; identified by sequence similarity NP_742321.1 similar to GP:9951794; identified by sequence similarity NP_742322.1 similar to GP:9951793; identified by sequence similarity NP_742324.1 similar to GP:3249555; identified by sequence similarity NP_742325.1 similar to GB:L15189, GB:L11066, GB:D17027, GB:D17196, SP:P38646, and PID:292059; identified by sequence similarity NP_742326.1 identified by match to PFAM protein family HMM PF03466 NP_742327.1 identified by match to PFAM protein family HMM PF00441 NP_742328.1 identified by match to PFAM protein family HMM PF02515 NP_742329.1 similar to GB:M13295, GB:M13296, GB:M13297, GB:M13298, GB:M13299, SP:P03999, PID:180685, and PID:2138076; identified by sequence similarity NP_742330.1 similar to GP:9948517; identified by sequence similarity NP_742332.1 similar to GP:9947202; identified by sequence similarity NP_742334.1 identified by match to PFAM protein family HMM PF00563 NP_742335.1 identified by match to TIGR protein family HMM TIGR00998 NP_742336.1 identified by match to TIGR protein family HMM TIGR00968 NP_742337.1 similar to GP:7741585, and GP:7741585; identified by sequence similarity NP_742338.1 similar to SP:P10088; identified by sequence similarity NP_742339.1 identified by match to PFAM protein family HMM PF04069 NP_742340.1 identified by match to PFAM protein family HMM PF00005 NP_742341.1 similar to SP:P75851; identified by sequence similarity NP_742342.1 similar to GP:6642785; identified by sequence similarity NP_742343.1 similar to GB:L19657, GB:Y00525, PID:459864, and SP:P21484; identified by sequence similarity NP_742344.1 identified by match to PFAM protein family HMM PF03551 NP_742346.1 similar to GB:M23114, GB:M23116, GB:M23278, GB:M23115, SP:P16614, SP:P16615, PID:306850, PID:306851, and PID:567108; identified by sequence similarity NP_742347.1 identified by match to TIGR protein family HMM TIGR01730 NP_742348.1 identified by match to PFAM protein family HMM PF02321 NP_742349.1 identified by match to PFAM protein family HMM PF03675 NP_742352.1 similar to GP:3980387; identified by sequence similarity NP_742353.1 catalyzes the formation of arginine from (N-L-arginino)succinate NP_742354.1 similar to GB:U09067, PID:483876, PID:553456, GB:U09067, PID:483876, and PID:553456; identified by sequence similarity NP_742355.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis NP_742356.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane NP_742357.1 similar to GB:M55406, SP:Q02505, and PID:553594; identified by sequence similarity NP_742358.1 similar to GB:J03191, SP:P07737, and PID:190386; identified by sequence similarity NP_742359.1 similar to GB:L07648, GB:S78470, SP:P50539, PID:506627, and PID:976225; identified by sequence similarity NP_742360.1 binds specifically to the major sigma factor sigma 70; active in stationary phase NP_742361.1 similar to SP:P30417; identified by sequence similarity NP_742363.1 similar to GB:X15183, GB:M27024, GB:X07270, GB:M30626, SP:P07900, SP:P08238, PID:1620017, PID:1620018, PID:184419, PID:32486, PID:32488, and PID:703087; identified by sequence similarity NP_742364.1 similar to GB:D42053, PID:577309, GB:D42053, and PID:577309; identified by sequence similarity NP_742365.1 similar to GB:Y00486, GB:M16446, SP:P07741, PID:178867, and PID:28819; identified by sequence similarity NP_742366.1 identified by match to PFAM protein family HMM PF03596 NP_742367.1 identified by match to PFAM protein family HMM PF01810 NP_742368.1 identified by match to PFAM protein family HMM PF01145 NP_742369.1 identified by match to PFAM protein family HMM PF01957 NP_742370.1 similar to GP:5596803; identified by sequence similarity NP_742371.1 identified by match to PFAM protein family HMM PF00571 NP_742372.1 similar to GP:436965, and GP:14585845; identified by sequence similarity NP_742373.1 similar to GP:9948330; identified by sequence similarity NP_742374.1 identified by match to PFAM protein family HMM PF02910 NP_742375.1 identified by match to PFAM protein family HMM PF00037 NP_742376.1 identified by match to TIGR protein family HMM TIGR01729 NP_742377.1 identified by match to PFAM protein family HMM PF00528 NP_742378.1 identified by match to PFAM protein family HMM PF00005 NP_742379.1 similar to SP:P34945; identified by sequence similarity NP_742381.1 catalyzes the formation of succinate from succinate semialdehyde; NADP dependent NP_742382.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate NP_742383.1 identified by match to PFAM protein family HMM PF00072 NP_742384.1 identified by match to PFAM protein family HMM PF00990 NP_742385.1 identified by match to PFAM protein family HMM PF00487 NP_742386.1 identified by match to PFAM protein family HMM PF00990 NP_742387.1 similar to GB:L14542, SP:Q07444, and PID:292361; identified by sequence similarity NP_742388.1 identified by match to TIGR protein family HMM TIGR00960 NP_742389.1 identified by match to PFAM protein family HMM PF03180 NP_742390.1 identified by match to TIGR protein family HMM TIGR01409 NP_742391.1 identified by match to PFAM protein family HMM PF00441 NP_742392.1 similar to SP:P54998; identified by sequence similarity NP_742393.1 similar to GB:M57732, SP:P20823, PID:1708747, and PID:184265; identified by sequence similarity NP_742394.1 similar to SP:Q02470, and PID:149582; identified by sequence similarity NP_742395.1 similar to SP:P34880; identified by sequence similarity NP_742396.1 similar to GB:X74794, SP:P33991, and PID:940536; identified by sequence similarity NP_742397.1 identified by match to TIGR protein family HMM TIGR00842 NP_742398.1 catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers NP_742399.1 similar to GB:X14482, SP:P11796, PID:19693, PID:411152, and PID:411889; identified by sequence similarity NP_742400.1 Part of the ABC transporter complex tauABC involved in taurine import NP_742401.1 similar to SP:Q47537; identified by sequence similarity NP_742402.1 similar to GB:D14812, and PID:285969; identified by sequence similarity NP_742403.1 similar to GP:3420603, and GP:3420603; identified by sequence similarity NP_742404.1 similar to SP:O85762, and SP:O85762; identified by sequence similarity NP_742405.1 similar to GP:3420605; identified by sequence similarity NP_742406.1 catalyzes the release of sulfite from alkanesulfonates NP_742407.1 similar to GP:3420607; identified by sequence similarity NP_742408.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease NP_742409.1 similar to GP:3420609, and GP:3420609; identified by sequence similarity NP_742410.1 similar to GP:9946138; identified by sequence similarity NP_742411.1 involved in the first step of glutathione biosynthesis NP_742412.1 similar to GP:9951508; identified by sequence similarity NP_742413.1 identified by match to PFAM protein family HMM PF00575 NP_742414.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation NP_742415.1 identified by match to PFAM protein family HMM PF02518 NP_742416.1 similar to GB:X57130, and PID:296288; identified by sequence similarity NP_742418.1 identified by match to PFAM protein family HMM PF01479 NP_742419.1 identified by match to PFAM protein family HMM PF01569 NP_742420.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers NP_742421.1 identified by match to PFAM protein family HMM PF03061 NP_742423.1 similar to SP:P07658; identified by sequence similarity NP_742424.1 similar to GB:X60787, GB:S41456, SP:Q01167, PID:1388160, and PID:33854; identified by sequence similarity NP_742425.1 identified by match to PFAM protein family HMM PF01476 NP_742426.1 identified by match to PFAM protein family HMM PF00702 NP_742427.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose NP_742428.1 similar to SP:P22255; identified by sequence similarity NP_742429.1 similar to GB:Z22971, GB:Z22969, GB:Z22968, PID:312148, GB:Z22971, GB:Z22969, GB:Z22968, and PID:312148; identified by sequence similarity NP_742430.1 identified by match to PFAM protein family HMM PF00072 NP_742431.1 similar to GP:9951467; identified by sequence similarity NP_742432.1 similar to GP:3135676; identified by sequence similarity NP_742433.1 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis NP_742434.1 similar to GP:5712714, and GP:5712714; identified by sequence similarity NP_742435.1 similar to GP:9948840, GB:U00020, and PID:467105; identified by sequence similarity NP_742436.1 similar to SP:P35646, GB:Z12609, and PID:41331; identified by sequence similarity NP_742437.1 identified by match to PFAM protein family HMM PF02518 NP_742438.1 similar to GB:L10328, SP:P26218, PID:290568, GB:L10328, SP:P26218, and PID:290568; identified by sequence similarity NP_742439.1 similar to SP:P48632; identified by sequence similarity NP_742440.1 similar to GP:9946035, and GP:9946035; identified by sequence similarity NP_742441.1 identified by match to PFAM protein family HMM PF01381 NP_742442.1 similar to GP:6960288; identified by sequence similarity NP_742443.1 similar to GP:6960297; identified by sequence similarity NP_742447.1 similar to GP:2668597; identified by sequence similarity NP_742448.1 similar to GB:L03840, GB:M59373, SP:P22455, PID:182571, PID:186621, and PID:31372; identified by sequence similarity NP_742449.1 identified by match to PFAM protein family HMM PF00497 NP_742450.1 similar to GP:9951453; identified by sequence similarity NP_742451.1 similar to GB:X53331, GB:X07362, GB:M55270, GB:M58549, SP:P08493, PID:187591, PID:187593, PID:34614, and PID:34618; identified by sequence similarity NP_742453.1 similar to GB:M63959, GB:U06976, SP:P30533, PID:1235526, PID:177874, and PID:463882; identified by sequence similarity NP_742455.1 similar to GB:X74567, SP:P42214, SP:P42501, PID:397405, and PID:455023; identified by sequence similarity NP_742456.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis NP_742457.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide NP_742459.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide NP_742460.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase NP_742461.1 identified by match to PFAM protein family HMM PF03603 NP_742462.1 identified by match to TIGR protein family HMM TIGR01183 NP_742463.1 identified by match to PFAM protein family HMM PF04069 NP_742464.1 similar to SP:P42630; identified by sequence similarity NP_742465.1 identified by match to PFAM protein family HMM PF00165 NP_742467.1 identified by match to PFAM protein family HMM PF02051 NP_742469.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA NP_742470.1 similar to GP:9951711, and GP:9951711; identified by sequence similarity NP_742471.1 identified by match to PFAM protein family HMM PF04069 NP_742472.1 identified by match to PFAM protein family HMM PF00165 NP_742474.1 similar to GB:M86752, SP:P31948, and PID:184565; identified by sequence similarity NP_742475.1 identified by match to PFAM protein family HMM PF01244 NP_742477.1 identified by match to TIGR protein family HMM TIGR01317 NP_742478.1 identified by match to PFAM protein family HMM PF02754 NP_742479.1 identified by match to PFAM protein family HMM PF00766 NP_742480.1 identified by match to PFAM protein family HMM PF01012 NP_742481.1 similar to GP:2950328; identified by sequence similarity NP_742482.1 identified by match to PFAM protein family HMM PF00355 NP_742483.1 similar to GP:9951737; identified by sequence similarity NP_742484.1 similar to GP:9947573; identified by sequence similarity NP_742487.1 identified by match to PFAM protein family HMM PF00672 NP_742488.1 similar to GP:2865134, and GP:2865134; identified by sequence similarity NP_742489.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate NP_742490.1 similar to SP:P40875; identified by sequence similarity NP_742491.1 similar to GP:9951744, GB:U11053, GB:U17298, GB:L36130, SP:P41145, PID:532060, PID:595933, PID:596070, PID:598185, and PID:722618; identified by sequence similarity NP_742492.1 similar to GB:U11053, GB:U17298, GB:L36130, SP:P41145, PID:532060, PID:595933, PID:596070, PID:598185, and PID:722618; identified by sequence similarity NP_742493.1 similar to GB:U11053, GB:U17298, GB:L36130, SP:P41145, PID:532060, PID:595933, PID:596070, PID:598185, and PID:722618; identified by sequence similarity NP_742494.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine NP_742495.1 similar to SP:P46154, GB:X64318, GB:U26173, GB:S79880, PID:1237118, and PID:30956; identified by sequence similarity NP_742499.1 identified by match to TIGR protein family HMM TIGR00530 NP_742500.1 similar to GP:9946323, and GP:9946323; identified by sequence similarity NP_742501.1 similar to GB:X66899, GB:X72990, GB:X72991, GB:X72992, GB:X72993, GB:X72994, GB:X72995, GB:X72996, GB:X72997, GB:X72998, GB:X72999, GB:X73000, GB:X73001, GB:X73002, GB:X73003, GB:X73004, SP:Q01844, PID:1572086, PID:1666068, PID:31280, and PID:825654; identified by sequence similarity NP_742502.1 identified by match to TIGR protein family HMM TIGR01262 NP_742503.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress NP_742504.1 identified by match to PFAM protein family HMM PF00990 NP_742505.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA NP_742506.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC NP_742507.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme NP_742508.1 similar to GB:M19116, PID:142133, GB:X04500, GB:M15330, GB:K02770, GB:M54933, GB:X02532, GB:X56087, GB:X52431, GB:M15840, SP:P01584, PID:186288, PID:307043, PID:307045, PID:312408, PID:33790, PID:35663, and PID:386816; identified by sequence similarity NP_742509.1 similar to GB:L13203, SP:Q12951, PID:1911185, and PID:563168; identified by sequence similarity NP_742510.1 identified by match to PFAM protein family HMM PF00534 NP_742511.1 similar to GP:4210950; identified by sequence similarity NP_742513.1 similar to GP:4323000; identified by sequence similarity NP_742516.1 identified by match to PFAM protein family HMM PF03929 NP_742517.1 similar to GB:M31516, GB:M30142, SP:P08174, and PID:181476; identified by sequence similarity NP_742519.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in P. aeruginosa this sigma factor regulates the production of the ferrichrome outer membrane receptor FiuA. NP_742520.1 identified by match to TIGR protein family HMM TIGR00573 NP_742521.1 similar to GB:K00431, SP:P02929, PID:148023, PID:902383, PID:902392, PID:902401, PID:902410, PID:902419, PID:902428, PID:902437, PID:902446, PID:902455, PID:902464, PID:902473, PID:902482, GB:U00096, PID:1742041, and PID:1787505; identified by sequence similarity NP_742522.1 similar to GB:X74448, and SP:P43448; identified by sequence similarity NP_742523.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA NP_742524.1 identified by match to PFAM protein family HMM PF01842 NP_742525.1 similar to SP:P27844, GB:X74448, and SP:P43448; identified by sequence similarity NP_742526.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages NP_742527.1 identified by match to PFAM protein family HMM PF02573 NP_742528.1 similar to GP:5921548, and GP:5921548; identified by sequence similarity NP_742529.1 similar to GB:L05091, GB:U58682, SP:P25112, PID:1518637, and PID:337403; identified by sequence similarity NP_742530.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine NP_742531.1 identified by match to TIGR protein family HMM TIGR01738 NP_742532.1 similar to GB:M57707, GB:M38258, SP:P13631, SP:P22932, PID:190868, PID:190872, and PID:306887; identified by sequence similarity NP_742533.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium NP_742534.1 similar to GP:9946369, and GP:9946369; identified by sequence similarity NP_742535.1 identified by match to PFAM protein family HMM PF00441 NP_742536.1 identified by match to PFAM protein family HMM PF00990 NP_742537.1 identified by match to PFAM protein family HMM PF00441 NP_742538.1 identified by match to PFAM protein family HMM PF03466 NP_742539.1 similar to SP:P18335; identified by sequence similarity NP_742540.1 similar to SP:Q05067, and PID:289135; identified by sequence similarity NP_742542.1 identified by match to TIGR protein family HMM TIGR01738 NP_742543.1 similar to GB:L19999, GB:L19955, GB:X84654, GB:L15346, GB:U72196, SP:P50224, SP:P50225, SP:P50226, PID:1314740, PID:1575788, PID:179042, PID:1907312, PID:306455, PID:307343, PID:488285, PID:495487, PID:553649, PID:671534, PID:671642, PID:736379, PID:758595, PID:758597, PID:847763, PID:881503, and PID:881505; identified by sequence similarity NP_742544.1 with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone NP_742545.1 Required in the synthesis of PPQ, but its exact function is unknown NP_742546.1 possibly involved in transport of pyrroloquinoline quinone transport NP_742547.1 Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme NP_742548.1 similar to GB:U09073, GB:U09074, PID:483888, PID:483890, PID:483904, GB:U09073, GB:U09074, PID:483888, PID:483890, and PID:483904; identified by sequence similarity NP_742549.1 similar to GB:X51518, SP:P15107, and PID:65259; identified by sequence similarity NP_742550.1 similar to GP:7209214, GB:M27389, PID:2218046, PID:292791, and PID:975615; identified by sequence similarity NP_742551.1 similar to GB:X64062, SP:Q00637, PID:1335657, and PID:409457; identified by sequence similarity NP_742552.1 similar to GP:6009396; identified by sequence similarity NP_742553.1 identified by match to PFAM protein family HMM PF03466 NP_742554.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria NP_742555.1 synthesizes RNA primers at the replication forks NP_742556.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA NP_742557.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity NP_742558.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX NP_742559.1 similar to SP:P31055; identified by sequence similarity NP_742560.1 similar to SP:O66550; identified by sequence similarity NP_742561.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases NP_742562.1 identified by match to PFAM protein family HMM PF04293 NP_742563.1 identified by match to PFAM protein family HMM PF04285 NP_742565.1 belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine NP_742566.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP NP_742567.1 protein associated with Co2+ and Mg2+ efflux NP_742568.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin NP_742569.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) NP_742570.1 similar to GB:J03278, GB:M30493, SP:P09619, PID:189730, PID:189732, PID:2107947, and PID:532593; identified by sequence similarity NP_742571.1 similar to GP:4545243, and GP:4545243; identified by sequence similarity NP_742572.1 similar to GP:4545244; identified by sequence similarity NP_742573.1 similar to GB:L10126, GB:L31848, SP:P36896, PID:338215, PID:555934, PID:576681, PID:576682, and PID:576683; identified by sequence similarity NP_742574.1 identified by match to PFAM protein family HMM PF00070 NP_742575.1 identified by match to TIGR protein family HMM TIGR00229 NP_742576.1 similar to GB:X64624, SP:Q01851, PID:35915, PID:508494, and PID:602106; identified by sequence similarity NP_742577.1 identified by match to TIGR protein family HMM TIGR00968 NP_742578.1 identified by match to PFAM protein family HMM PF01547 NP_742579.1 identified by match to TIGR protein family HMM TIGR01581 NP_742580.1 identified by match to TIGR protein family HMM TIGR01095 NP_742581.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate NP_742582.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate NP_742583.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine NP_742584.1 similar to GB:L19158, GB:D26443, GB:U03504, GB:Z31713, SP:P43003, PID:487339, PID:607113, PID:825504, and PID:825663; identified by sequence similarity NP_742586.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity NP_742587.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate NP_742588.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water NP_742589.1 identified by match to PFAM protein family HMM PF03099 NP_742590.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons NP_742591.1 similar to GB:L32172, PID:476013, GB:L32172, and PID:476013; identified by sequence similarity NP_742592.1 similar to GB:L37080, SP:P49326, PID:559046, PID:623242, GB:L37080, SP:P49326, PID:559046, and PID:623242; identified by sequence similarity NP_742593.1 identified by match to PFAM protein family HMM PF03232 NP_742594.1 identified by match to PFAM protein family HMM PF01230 NP_742595.1 identified by match to PFAM protein family HMM PF00106 NP_742596.1 identified by match to PFAM protein family HMM PF03060 NP_742597.1 identified by match to PFAM protein family HMM PF03653 NP_742598.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate NP_742599.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors NP_742600.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling NP_742601.1 identified by match to PFAM protein family HMM PF04225 NP_742602.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) NP_742603.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon NP_742604.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP NP_742606.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu NP_742607.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force NP_742608.1 Modulates Rho-dependent transcription termination NP_742609.1 binds directly to 23S ribosomal RNA NP_742610.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA NP_742611.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit NP_742612.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors NP_742613.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme NP_742614.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter NP_742615.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance NP_742616.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit NP_742617.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene NP_742618.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu NP_742619.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex NP_742620.2 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin NP_742621.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA NP_742622.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel NP_742623.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation NP_742624.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA NP_742625.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center NP_742626.2 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation NP_742627.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e NP_742628.2 one of the stabilizing components for the large ribosomal subunit NP_742629.1 primary binding protein; helps mediate assembly; involved in translation fidelity NP_742630.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase NP_742631.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel NP_742632.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 NP_742633.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif NP_742634.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit NP_742635.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance NP_742636.1 binds 5S rRNA along with protein L5 and L25 NP_742637.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance NP_742638.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 NP_742639.1 late assembly protein NP_742640.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase NP_742641.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif NP_742642.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA NP_742643.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 NP_742644.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination NP_742645.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme NP_742646.1 is a component of the macrolide binding site in the peptidyl transferase center NP_742647.1 similar to GB:M63346, SP:P24754, GB:M63347, PID:146987, PID:146995, GB:U03100, GB:D14705, GB:L22080, GB:D13866, SP:P35221, PID:1172426, PID:347316, PID:404105, and PID:433411; identified by sequence similarity NP_742648.1 similar to SP:P28017, GB:X62377, and PID:39657; identified by sequence similarity NP_742649.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate NP_742650.1 identified by match to PFAM protein family HMM PF03605 NP_742651.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA NP_742652.1 identified by match to PFAM protein family HMM PF00155 NP_742653.1 similar to SP:P46490, GB:X54107, and PID:48759; identified by sequence similarity NP_742654.1 similar to GB:M20879, GB:M20881, GB:M22437, GB:M93700, GB:M93704, GB:M33664, SP:P11462, SP:P11463, SP:P11464, PID:180239, PID:183482, PID:190591, PID:190624, PID:190636, PID:190645, PID:190653, PID:306791, PID:306796, PID:306797, PID:306798, PID:553624, PID:603453, and PID:904281; identified by sequence similarity NP_742655.1 similar to GB:M61832, GB:M61831, SP:P23526, PID:178277, and PID:178279; identified by sequence similarity NP_742656.1 similar to GB:D14664, PID:285953, GB:L17326, and PID:306325; identified by sequence similarity NP_742657.1 similar to GB:L16783, PID:1778838, PID:1842253, PID:1842255, and PID:292331; identified by sequence similarity NP_742658.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis NP_742659.1 similar to GB:X71125, GB:X67731, SP:Q16769, PID:296949, and PID:525241; identified by sequence similarity NP_742660.1 similar to GB:L08424, SP:P50553, and PID:306460; identified by sequence similarity NP_742661.1 identified by match to PFAM protein family HMM PF01235 NP_742662.1 identified by match to PFAM protein family HMM PF01381 NP_742664.1 identified by match to TIGR protein family HMM TIGR01214 NP_742665.1 identified by match to TIGR protein family HMM TIGR01746 NP_742666.1 identified by match to PFAM protein family HMM PF03551 NP_742667.1 identified by match to PFAM protein family HMM PF04087 NP_742668.1 identified by match to PFAM protein family HMM PF03922 NP_742670.1 identified by match to PFAM protein family HMM PF03824 NP_742671.1 identified by match to TIGR protein family HMM TIGR00960 NP_742674.1 identified by match to PFAM protein family HMM PF00085 NP_742676.2 similar to GP:9950254; identified by sequence similarity NP_742677.1 similar to GB:L08176, GB:L31582, GB:L31583, GB:L31584, GB:L31581, SP:P32248, PID:183485, PID:468316, and PID:468320; identified by sequence similarity NP_742678.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine NP_742679.2 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis NP_742680.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not NP_742681.1 Regulates rRNA biosynthesis by transcriptional antitermination NP_742682.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP NP_742683.1 similar to GP:9950246, and GP:9950246; identified by sequence similarity NP_742684.1 identified by match to PFAM protein family HMM PF00497 NP_742685.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate NP_742686.1 similar to GP:9950242; identified by sequence similarity NP_742687.1 similar to GP:4063695; identified by sequence similarity NP_742688.1 identified by match to PFAM protein family HMM PF00593 NP_742689.1 similar to GP:7741879; identified by sequence similarity NP_742690.2 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate NP_742691.1 similar to GB:M92934, GB:X78947, GB:S56201, SP:P29279, PID:1514570, PID:180924, PID:474934, and PID:984956; identified by sequence similarity NP_742692.1 catalyzes the bidirectional exonucleolytic cleavage of DNA NP_742693.1 DHBP synthase; functions during riboflavin biosynthesis NP_742694.1 identified by match to TIGR protein family HMM TIGR00073 NP_742695.1 identified by match to PFAM protein family HMM PF00326 NP_742696.1 identified by match to PFAM protein family HMM PF00672 NP_742697.1 similar to GB:X64838, SP:P30622, PID:35999, GB:X64838, SP:P30622, and PID:35999; identified by sequence similarity NP_742698.1 similar to GB:M29874, GB:M29873, SP:P20813, and PID:181294; identified by sequence similarity NP_742699.1 identified by match to PFAM protein family HMM PF03794 NP_742700.1 similar to GB:M59081, SP:P30144, PID:141992, GB:M59081, SP:P30144, and PID:141992; identified by sequence similarity NP_742701.1 catalyzes the hydrolysis of pyrophosphate to phosphate NP_742703.1 similar to GP:9950224; identified by sequence similarity NP_742704.1 identified by match to TIGR protein family HMM TIGR01575 NP_742705.1 catalyzes the formation of acetaldehyde from ethanolamine NP_742706.1 identified by match to PFAM protein family HMM PF03475 NP_742707.1 similar to GP:9950217, GB:Z15005, SP:Q02224, and PID:29865; identified by sequence similarity NP_742708.1 identified by match to TIGR protein family HMM TIGR01722 NP_742709.1 similar to GP:9950215; identified by sequence similarity NP_742710.1 identified by match to PFAM protein family HMM PF01225 NP_742711.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate NP_742712.1 similar to GP:9950211; identified by sequence similarity NP_742713.1 identified by match to PFAM protein family HMM PF01118 NP_742714.1 identified by match to PFAM protein family HMM PF02493 NP_742715.1 similar to GB:M10058, SP:P07306, PID:179079, GB:M10058, SP:P07306, and PID:179079; identified by sequence similarity NP_742716.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA NP_742717.1 similar to GB:M30448, SP:P13862, PID:181155, PID:29965, PID:29967, PID:29969, GB:M30448, SP:P13862, PID:181155, PID:29965, PID:29967, and PID:29969; identified by sequence similarity NP_742718.1 similar to GB:Z19585, SP:P35443, PID:311626, GB:Z19585, SP:P35443, and PID:311626; identified by sequence similarity NP_742719.1 similar to GB:M57763, SP:P26438, PID:178989, GB:M57763, SP:P26438, and PID:178989; identified by sequence similarity NP_742720.1 similar to GP:3688510, GB:S46950, SP:P29274, GB:U20231, PID:1117998, PID:177892, and PID:400452; identified by sequence similarity NP_742721.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_742722.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_742723.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis NP_742724.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm NP_742725.1 similar to GP:8307682; identified by sequence similarity NP_742726.1 identified by match to PFAM protein family HMM PF00990 NP_742728.1 similar to SP:Q9X7Q6; identified by sequence similarity NP_742729.1 involved in start site selection during the initiation of translation NP_742730.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis NP_742732.1 identified by match to PFAM protein family HMM PF04235 NP_742733.1 similar to SP:P10345, PID:41572, GB:U00096, PID:1651370, PID:1787030, SP:P10345, PID:41572, GB:U00096, PID:1651370, and PID:1787030; identified by sequence similarity NP_742734.1 similar to GP:9946353, and GP:9946353; identified by sequence similarity NP_742735.1 penicillin-insensitive transglycosylase/transpeptidase NP_742737.1 identified by match to PFAM protein family HMM PF00072 NP_742739.1 identified by match to TIGR protein family HMM TIGR01690 NP_742743.1 identified by match to PFAM protein family HMM PF01575 NP_742744.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_742745.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation NP_742746.1 similar to GP:9945995; identified by sequence similarity NP_742747.1 identified by match to PFAM protein family HMM PF00672 NP_742748.1 identified by match to PFAM protein family HMM PF00376 NP_742749.1 similar to GP:9950104; identified by sequence similarity NP_742750.1 similar to GP:9949730; identified by sequence similarity NP_742751.1 identified by match to PFAM protein family HMM PF00403 NP_742752.1 identified by match to TIGR protein family HMM TIGR00880 NP_742753.1 identified by match to PFAM protein family HMM PF01022 NP_742754.1 catalyzes the formation of inosine from adenosine NP_742755.1 similar to GP:15140986; identified by sequence similarity NP_742756.1 identified by match to TIGR protein family HMM TIGR00257 NP_742757.1 similar to GP:9945999; identified by sequence similarity NP_742758.1 identified by match to PFAM protein family HMM PF03466 NP_742759.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate NP_742760.1 similar to SP:P28810; identified by sequence similarity NP_742761.1 similar to SP:P76272; identified by sequence similarity NP_742762.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase NP_742763.1 identified by match to PFAM protein family HMM PF03023 NP_742764.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities NP_742765.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme NP_742766.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis NP_742767.1 similar to SP:P22563, GB:L08666, SP:P45880, PID:190200, and PID:190201; identified by sequence similarity NP_742768.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway NP_742769.1 identified by match to TIGR protein family HMM TIGR01708 NP_742773.1 identified by match to PFAM protein family HMM PF00114 NP_742774.1 similar to GP:9950792; identified by sequence similarity NP_742775.1 similar to GP:10567370; identified by sequence similarity NP_742776.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide NP_742777.1 similar to GP:3644003, GB:J03910, GB:S68954, SP:P02795, SP:P04731, SP:P04732, SP:P04733, SP:P07438, SP:P13640, SP:P25713, SP:P80294, SP:P80295, SP:P80296, PID:188713, PID:517349, and PID:914851; identified by sequence similarity NP_742778.1 similar to GB:M93015, SP:P29916, and PID:150623; identified by sequence similarity NP_742779.1 similar to GB:M93015, SP:P29916, and PID:150623; identified by sequence similarity NP_742780.1 similar to GB:M93015, SP:P29916, and PID:150623; identified by sequence similarity NP_742781.1 similar to SP:P21175, GB:U10860, SP:P49915, and PID:595410; identified by sequence similarity NP_742782.1 similar to GB:M74011, SP:Q01244, PID:155552, GB:M74011, SP:Q01244, and PID:155552; identified by sequence similarity NP_742783.1 similar to GP:5924036; identified by sequence similarity NP_742784.1 similar to GB:X77722, PID:1147572, PID:488364, PID:994725, PID:994726, PID:995295, and PID:995297; identified by sequence similarity NP_742785.1 identified by match to PFAM protein family HMM PF02578 NP_742786.1 identified by match to PFAM protein family HMM PF02861 NP_742787.1 similar to GP:9664855, and SP:P00393; identified by sequence similarity NP_742791.1 similar to GP:3169572, and GP:9950773; identified by sequence similarity NP_742792.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis NP_742793.1 similar to GB:M18461, GB:S60788, PID:1552514, PID:339016, PID:575274, PID:930052, GB:M18461, GB:S60788, PID:1552514, PID:339016, PID:575274, and PID:930052; identified by sequence similarity NP_742794.1 similar to GB:L06139, SP:Q02763, PID:292824, GB:L06139, SP:Q02763, and PID:292824; identified by sequence similarity NP_742795.1 similar to GB:M34046, GB:M61886, GB:J04129, SP:P09466, GB:M34046, GB:M61886, GB:J04129, and SP:P09466; identified by sequence similarity NP_742796.1 similar to GP:4323583, GB:L01112, SP:P45375, PID:145016, and PID:1247706; identified by sequence similarity NP_742797.1 similar to SP:Q48770; identified by sequence similarity NP_742798.1 similar to GP:11641376; identified by sequence similarity NP_742799.1 similar to GP:8037784; identified by sequence similarity NP_742801.1 identified by match to PFAM protein family HMM PF00005 NP_742803.1 identified by match to PFAM protein family HMM PF02588 NP_742809.1 similar to GP:15075854; identified by sequence similarity NP_742810.1 identified by match to PFAM protein family HMM PF00293 NP_742811.1 similar to GP:14270229; identified by sequence similarity NP_742812.1 identified by match to TIGR protein family HMM TIGR01575 NP_742813.1 identified by match to PFAM protein family HMM PF03600 NP_742815.1 Catalyzes the reversible oxidation of malate to oxaloacetate NP_742816.1 similar to GP:2708665; identified by sequence similarity NP_742817.1 identified by match to TIGR protein family HMM TIGR01726 NP_742818.1 identified by match to PFAM protein family HMM PF00497 NP_742819.1 similar to GB:U02081, and PID:548082; identified by sequence similarity NP_742820.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine NP_742821.1 similar to SP:P13971, GB:X05813, and PID:42644; identified by sequence similarity NP_742822.1 similar to SP:P24734; identified by sequence similarity NP_742823.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine NP_742824.1 similar to GP:6224605; identified by sequence similarity NP_742825.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine NP_742826.1 similar to SP:P32724, GB:X58406, PID:581361, PID:2094830, and GB:AL123456; identified by sequence similarity NP_742827.1 identified by match to TIGR protein family HMM TIGR00004 NP_742828.1 identified by match to PFAM protein family HMM PF00196 NP_742829.1 similar to GB:L06139, SP:Q02763, and PID:292824; identified by sequence similarity NP_742830.1 similar to GB:L01694, SP:Q03113, and PID:182994; identified by sequence similarity NP_742831.1 similar to SP:P15109, and PID:151431; identified by sequence similarity NP_742832.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate NP_742833.1 similar to GP:9950851; identified by sequence similarity NP_742835.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence NP_742836.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer NP_742837.1 identified by match to PFAM protein family HMM PF01272 NP_742841.1 identified by match to TIGR protein family HMM TIGR00764 NP_742843.1 identified by match to PFAM protein family HMM PF03350 NP_742845.1 similar to SP:P39311; identified by sequence similarity NP_742847.1 similar to GB:L19182, and PID:307151; identified by sequence similarity NP_742848.1 similar to GP:5712726, GB:L05568, SP:P31645, PID:2149095, PID:291820, and PID:36433; identified by sequence similarity NP_742849.2 similar to GP:5712722, GB:X03072, SP:P04628, and PID:33936; identified by sequence similarity NP_742850.1 involved in the peptidyltransferase reaction during translation NP_742851.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication NP_742852.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis NP_742853.1 similar to GB:J04970, SP:P14384, and PID:179932; identified by sequence similarity NP_742855.1 identified by match to PFAM protein family HMM PF04288 NP_742858.1 identified by match to PFAM protein family HMM PF00583 NP_742859.1 identified by match to PFAM protein family HMM PF03466 NP_742860.1 identified by match to PFAM protein family HMM PF01810 NP_742862.1 similar to GB:X64063, SP:P28765, and PID:1335662; identified by sequence similarity NP_742863.1 identified by match to PFAM protein family HMM PF03619 NP_742864.1 similar to GB:L06139, SP:Q02763, and PID:292824; identified by sequence similarity NP_742866.1 similar to SP:Q92383, SP:P37446, GB:X76901, and PID:436881; identified by sequence similarity NP_742867.1 identified by match to PFAM protein family HMM PF01035 NP_742868.1 identified by match to PFAM protein family HMM PF03528 NP_742869.1 similar to SP:P19841, GB:X54690, and PID:45698; identified by sequence similarity NP_742870.1 identified by match to TIGR protein family HMM TIGR00800 NP_742872.1 similar to GB:M17219, SP:P04898, SP:P04899, SP:P08754, and PID:386747; identified by sequence similarity NP_742873.1 identified by match to PFAM protein family HMM PF03976 NP_742874.1 similar to GP:7742003; identified by sequence similarity NP_742875.1 similar to SP:P28607, PID:38694, SP:P28607, and PID:38694; identified by sequence similarity NP_742876.1 identified by match to PFAM protein family HMM PF02321 NP_742877.1 identified by match to TIGR protein family HMM TIGR01730 NP_742878.1 identified by match to PFAM protein family HMM PF03631 NP_742879.1 identified by match to PFAM protein family HMM PF04138 NP_742880.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 NP_742881.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation NP_742882.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response NP_742883.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP NP_742884.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis NP_742885.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein NP_742886.1 identified by match to PFAM protein family HMM PF00515 NP_742887.1 similar to GP:5051798; identified by sequence similarity NP_742888.1 identified by match to TIGR protein family HMM TIGR00888 NP_742889.1 identified by match to PFAM protein family HMM PF00391 NP_742890.1 similar to GB:L28041, GB:X85789, PID:407374, PID:476745, and PID:757815; identified by sequence similarity NP_742891.1 similar to GP:4158183, and GP:4158183; identified by sequence similarity NP_742892.1 similar to SP:P35879; identified by sequence similarity NP_742893.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins NP_742894.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 NP_742895.1 similar to GP:9950919, GB:L34170, GB:L13852, SP:P41226, and PID:986881; identified by sequence similarity NP_742896.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase NP_742897.1 converts L-glutamate to D-glutamate, a component of peptidoglycan NP_742899.1 identified by match to PFAM protein family HMM PF00106 NP_742900.1 similar to GB:X56494, GB:M23725, GB:M26252, SP:P14618, SP:P14786, GB:X56494, GB:M23725, GB:M26252, SP:P14618, and SP:P14786; identified by sequence similarity NP_742901.1 identified by match to PFAM protein family HMM PF00376 NP_742903.1 identified by match to PFAM protein family HMM PF01593 NP_742904.1 identified by match to TIGR protein family HMM TIGR01746 NP_742905.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic NP_742906.1 identified by match to PFAM protein family HMM PF00860 NP_742907.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate NP_742908.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively NP_742911.1 similar to GP:9950895; identified by sequence similarity NP_742912.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate NP_742917.1 identified by match to PFAM protein family HMM PF01553 NP_742919.1 similar to GP:9950887; identified by sequence similarity NP_742920.1 identified by match to PFAM protein family HMM PF01435 NP_742921.1 identified by match to PFAM protein family HMM PF01169 NP_742922.1 identified by match to PFAM protein family HMM PF03602 NP_742923.1 Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor NP_742924.1 activates fatty acids by binding to coenzyme A NP_742926.1 similar to GP:9950108; identified by sequence similarity NP_742928.1 similar to GP:9950105; identified by sequence similarity NP_742929.1 identified by match to PFAM protein family HMM PF00072 NP_742930.1 similar to GP:9947604; identified by sequence similarity NP_742932.1 toxin of the ChpB-ChpS toxin-antitoxin system NP_742933.1 identified by match to PFAM protein family HMM PF00753 NP_742934.1 identified by match to PFAM protein family HMM PF00691 NP_742935.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate NP_742936.1 similar to GB:D14657, and PID:285939; identified by sequence similarity NP_742937.1 similar to GB:D90277, GB:L00692, GB:M22433, GB:L00693, GB:D90278, SP:P40198, PID:219537, and PID:553220; identified by sequence similarity NP_742938.1 identified by match to PFAM protein family HMM PF00255 NP_742939.1 identified by match to PFAM protein family HMM PF00534 NP_742940.1 identified by match to TIGR protein family HMM TIGR00229 NP_742946.1 role in sulfur assimilation NP_742947.1 similar to SP:P09625; identified by sequence similarity NP_742948.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide NP_742950.1 similar to GP:4079828, GB:K02765, SP:P01024, PID:179665, and PID:181130; identified by sequence similarity NP_742952.1 identified by match to TIGR protein family HMM TIGR00010 NP_742953.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism NP_742954.1 similar to SP:P23388; identified by sequence similarity NP_742955.1 similar to GB:L20852, and PID:306772; identified by sequence similarity NP_742956.1 similar to GB:J04213, GB:L34219, SP:P12271, PID:190854, and PID:598229; identified by sequence similarity NP_742959.1 identified by match to PFAM protein family HMM PF00990 NP_742960.1 similar to GP:9945994; identified by sequence similarity NP_742961.1 identified by match to PFAM protein family HMM PF03692 NP_742963.1 similar to GP:5361003; identified by sequence similarity NP_742964.1 similar to GP:9947867; identified by sequence similarity NP_742965.1 identified by match to PFAM protein family HMM PF00664 NP_742966.1 identified by match to PFAM protein family HMM PF02321 NP_742967.1 similar to GP:7741985; identified by sequence similarity NP_742968.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon NP_742969.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine NP_742970.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein NP_742973.1 similar to SP:Q9WWR1, GB:M27504, GB:Z15111, GB:S56813, GB:X68060, GB:Z15115, GB:D17023, SP:Q02880, PID:1354507, PID:2088635, PID:288565, PID:288567, PID:339810, PID:37231, and PID:38325; identified by sequence similarity NP_742974.1 similar to SP:Q9WWR2; identified by sequence similarity NP_742975.1 similar to SP:Q9WWR3, GB:M38083, GB:M59199, GB:M62783, SP:P17050, PID:1513067, PID:178248, and PID:189055; identified by sequence similarity NP_742976.1 similar to SP:Q9WWR4, GB:X66403, SP:Q04844, and PID:560153; identified by sequence similarity NP_742977.1 converts protoheme IX and farnesyl diphosphate to heme O NP_742978.1 identified by match to TIGR protein family HMM TIGR01141 NP_742980.1 identified by match to PFAM protein family HMM PF03692 NP_742981.1 identified by match to PFAM protein family HMM PF00583 NP_742982.1 similar to GB:M86752, SP:P31948, PID:184565, GB:M86752, SP:P31948, and PID:184565; identified by sequence similarity NP_742983.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA NP_742984.1 catalyzes the formation of selenophosphate from selenide and ATP NP_742985.1 similar to GP:9949442, GB:L02932, GB:Y07619, SP:Q07869, PID:1514595, PID:1526972, and PID:307341; identified by sequence similarity NP_742986.1 similar to GB:M83670, SP:P22748, PID:179791, and PID:409726; identified by sequence similarity NP_742987.1 similar to SP:P16683; identified by sequence similarity NP_742988.1 identified by match to TIGR protein family HMM TIGR01726 NP_742989.1 similar to GP:8037798, SP:P32109, GB:U15124, and PID:563996; identified by sequence similarity NP_742990.1 identified by match to PFAM protein family HMM PF01381 NP_742991.1 identified by match to TIGR protein family HMM TIGR01575 NP_742992.1 identified by match to PFAM protein family HMM PF01087 NP_742993.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step NP_742994.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) NP_742995.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex NP_742996.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane NP_742997.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF NP_742998.1 similar to GP:9949993; identified by sequence similarity NP_742999.1 similar to GB:X56692, GB:M11725, GB:M11880, GB:M35163, SP:P02741, PID:181066, PID:181068, PID:181073, and PID:30213; identified by sequence similarity NP_743000.1 identified by match to PFAM protein family HMM PF00588 NP_743001.1 identified by match to PFAM protein family HMM PF00132 NP_743002.1 identified by match to PFAM protein family HMM PF02082 NP_743003.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis NP_743004.1 identified by match to PFAM protein family HMM PF01592 NP_743005.1 similar to GB:D90244, PID:216809, GB:D90244, and PID:216809; identified by sequence similarity NP_743006.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins NP_743007.1 involved in the maturation of iron-sulfur cluster-containing proteins NP_743008.1 similar to SP:P44428; identified by sequence similarity NP_743009.1 similar to SP:Q03047, and SP:Q03047; identified by sequence similarity NP_743010.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate NP_743011.1 identified by match to PFAM protein family HMM PF04055 NP_743012.1 identified by match to PFAM protein family HMM PF00515 NP_743013.1 identified by match to PFAM protein family HMM PF01381 NP_743014.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis NP_743015.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG NP_743016.1 similar to GP:9949974; identified by sequence similarity NP_743017.1 identified by match to PFAM protein family HMM PF01011 NP_743018.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains NP_743019.1 catalyzes the transfer of an amino moiety NP_743020.1 identified by match to PFAM protein family HMM PF00795 NP_743021.1 similar to SP:P38039, SP:P16169, GB:X51944, and PID:457801; identified by sequence similarity NP_743022.1 identified by match to PFAM protein family HMM PF00593 NP_743023.1 identified by match to PFAM protein family HMM PF03171 NP_743025.1 similar to SP:P06118, PID:38731, and PID:38756; identified by sequence similarity NP_743026.1 identified by match to PFAM protein family HMM PF00776 NP_743027.1 similar to GP:9947237; identified by sequence similarity NP_743028.1 similar to GB:Z24721, PID:1147590, PID:394739, and PID:404251; identified by sequence similarity NP_743029.1 identified by match to TIGR protein family HMM TIGR00968 NP_743030.1 identified by match to PFAM protein family HMM PF04306 NP_743031.1 identified by match to PFAM protein family HMM PF04069 NP_743032.1 identified by match to TIGR protein family HMM TIGR01726 NP_743033.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein NP_743034.1 identified by match to PFAM protein family HMM PF01547 NP_743036.1 similar to GP:9949563; identified by sequence similarity NP_743037.1 identified by match to PFAM protein family HMM PF00165 NP_743039.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides NP_743040.1 identified by match to TIGR protein family HMM TIGR01727 NP_743041.1 identified by match to PFAM protein family HMM PF04172 NP_743042.1 identified by match to TIGR protein family HMM TIGR01726 NP_743043.1 similar to GB:L11353, GB:Z22664, GB:X72655, SP:P35240, PID:292292, PID:312043, and PID:825719; identified by sequence similarity NP_743044.1 identified by match to PFAM protein family HMM PF03573 NP_743045.1 identified by match to PFAM protein family HMM PF00496 NP_743046.1 identified by match to PFAM protein family HMM PF00496 NP_743048.1 identified by match to PFAM protein family HMM PF04093 NP_743049.1 identified by match to PFAM protein family HMM PF00072 NP_743052.1 similar to GP:9950566; identified by sequence similarity NP_743053.1 identified by match to PFAM protein family HMM PF00614 NP_743054.1 identified by match to TIGR protein family HMM TIGR01737 NP_743055.1 similar to GP:15075332; identified by sequence similarity NP_743056.1 similar to GB:M81461, SP:P27028, SP:P27195, GB:X63674, PID:148698, GB:M81461, SP:P27028, SP:P27195, GB:X63674, and PID:148698; identified by sequence similarity NP_743057.1 similar to GB:D10980, SP:P27028, SP:P27195, GB:X63674, PID:216707, and PID:456523; identified by sequence similarity NP_743058.1 similar to GP:9950558, and SP:P00923; identified by sequence similarity NP_743060.1 similar to GP:9950556; identified by sequence similarity NP_743061.1 similar to GP:9950612; identified by sequence similarity NP_743062.1 similar to GB:M98830, SP:P25520, GB:X59940, PID:146073, PID:42026, GB:U00096, PID:1651627, PID:1651636, PID:1787488, PID:1805513, GB:M98830, SP:P25520, GB:X59940, PID:146073, PID:42026, GB:U00096, PID:1651627, PID:1651636, PID:1787488, and PID:1805513; identified by sequence similarity NP_743063.1 similar to GP:13892069, GB:M84993, SP:P26462, GB:X52093, and PID:154021; identified by sequence similarity NP_743064.1 similar to GB:D21144, PID:415277, PID:882432, SP:P52037, PID:2160242, PID:2367175, GB:D21144, PID:415277, PID:882432, SP:P52037, PID:2160242, and PID:2367175; identified by sequence similarity NP_743067.1 MexW; inner membrane protein; member of RND (resistance, nodulation, and division) family; involved in resistance to fluoroquinolones, tetracycline, chloramphenicol, erythromycin, ethidium bromide, and acriflavine; functions along with MexV and OprM NP_743068.1 identified by match to TIGR protein family HMM TIGR01730 NP_743069.1 similar to GP:9950602; identified by sequence similarity NP_743074.1 similar to GP:9950599; identified by sequence similarity NP_743075.1 identified by match to PFAM protein family HMM PF00990 NP_743076.1 similar to GP:1498060, SP:P04741, GB:X03923, GB:Z37500, PID:537154, PID:581086, PID:732682, GB:U00096, PID:1790768, and PID:1816486; identified by sequence similarity NP_743077.1 identified by match to PFAM protein family HMM PF01810 NP_743078.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport NP_743079.1 identified by match to TIGR protein family HMM TIGR01746 NP_743080.1 similar to GP:9950588, and GP:9950588; identified by sequence similarity NP_743081.1 similar to GP:6049283, and GP:6049283; identified by sequence similarity NP_743082.1 similar to GB:M63573, GB:M60857, GB:M60457, SP:P23284, PID:181250, PID:181335, and PID:337999; identified by sequence similarity NP_743084.1 identified by match to TIGR protein family HMM TIGR00530 NP_743085.1 similar to GP:9950577; identified by sequence similarity NP_743086.1 similar to GP:9950576; identified by sequence similarity NP_743087.1 similar to GB:M68878, SP:Q00853, and PID:144879; identified by sequence similarity NP_743088.1 similar to GB:J05272, SP:P20839, and PID:307067; identified by sequence similarity NP_743089.1 similar to GB:U22314, PID:1621501, PID:606944, and PID:606948; identified by sequence similarity NP_743090.1 similar to GP:4887206; identified by sequence similarity NP_743091.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_743092.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_743093.2 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain NP_743094.2 functions in MreBCD complex in some organisms NP_743095.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall NP_743096.1 identified by match to PFAM protein family HMM PF04093 NP_743097.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell NP_743098.1 similar to GB:M14058, SP:P00736, PID:179644, and PID:29539; identified by sequence similarity NP_743099.1 similar to GP:9950713; identified by sequence similarity NP_743100.1 identified by match to PFAM protein family HMM PF00795 NP_743101.1 similar to GB:M22995, GB:X12533, SP:P10113, PID:35859, PID:412180, and PID:511856; identified by sequence similarity NP_743102.1 similar to GP:9950710; identified by sequence similarity NP_743103.1 similar to GB:V00566, GB:J00299, GB:M29386, GB:D00411, SP:P01236, GB:U75583, PID:1620399, PID:1658518, PID:190354, PID:190356, PID:220018, PID:34211, PID:531101, and PID:531103; identified by sequence similarity NP_743104.1 similar to GB:X78425, and PID:467806; identified by sequence similarity NP_743105.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle NP_743106.1 similar to GP:4704563; identified by sequence similarity NP_743107.1 similar to GP:4581922, SP:P28017, GB:X62377, and PID:39657; identified by sequence similarity NP_743108.1 identified by match to PFAM protein family HMM PF03591 NP_743109.1 similar to GP:4138365; identified by sequence similarity NP_743110.1 similar to GP:4138364; identified by sequence similarity NP_743111.1 similar to GB:X63575, PID:2193884, GB:X06325, SP:P09002, and PID:1333690; identified by sequence similarity NP_743112.1 similar to PIR:S06713, GB:L10126, GB:L31848, SP:P36896, PID:338215, PID:555934, PID:576681, PID:576682, and PID:576683; identified by sequence similarity NP_743113.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen NP_743114.1 identified by match to TIGR protein family HMM TIGR00968 NP_743115.1 identified by match to PFAM protein family HMM PF03968 NP_743117.1 identified by match to TIGR protein family HMM TIGR01662 NP_743118.1 identified by match to PFAM protein family HMM PF01380 NP_743119.1 similar to GP:4336798, and GP:4336798; identified by sequence similarity NP_743120.1 similar to GP:4336799, and GP:4336799; identified by sequence similarity NP_743121.1 similar to GP:4336800, and GP:4336800; identified by sequence similarity NP_743122.1 similar to GP:4336801, and GP:4336801; identified by sequence similarity NP_743123.1 similar to GP:4336802, and GP:4336802; identified by sequence similarity NP_743124.1 similar to GP:4336803, and GP:4336803; identified by sequence similarity NP_743125.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active NP_743126.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ NP_743127.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer NP_743128.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis NP_743129.1 identified by match to PFAM protein family HMM PF01676 NP_743130.1 similar to GP:2961083; identified by sequence similarity NP_743131.1 similar to GP:2961082; identified by sequence similarity NP_743132.1 identified by match to PFAM protein family HMM PF02136 NP_743133.1 similar to GB:L05096, and PID:337413; identified by sequence similarity NP_743134.1 similar to SP:P33920; identified by sequence similarity NP_743135.1 identified by match to PFAM protein family HMM PF04067 NP_743136.1 similar to GP:14028719; identified by sequence similarity NP_743137.1 similar to SP:P75782; identified by sequence similarity NP_743138.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain NP_743140.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB NP_743141.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides NP_743143.1 similar to GP:9950003; identified by sequence similarity NP_743144.1 similar to GB:J04168, GB:M61827, SP:P16150, PID:180126, PID:307124, PID:338231, and PID:36456; identified by sequence similarity NP_743145.1 similar to GP:9950001; identified by sequence similarity NP_743146.1 similar to SP:P31667, PID:606346, GB:U00096, and PID:1789816; identified by sequence similarity NP_743147.1 similar to SP:O49849; identified by sequence similarity NP_743148.1 similar to SP:P42630; identified by sequence similarity NP_743149.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine NP_743150.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor NP_743151.1 identified by match to PFAM protein family HMM PF04173 NP_743154.1 similar to GP:15140382; identified by sequence similarity NP_743155.2 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription NP_743156.1 identified by match to PFAM protein family HMM PF04066 NP_743157.1 identified by match to PFAM protein family HMM PF03616 NP_743158.1 identified by match to PFAM protein family HMM PF00989 NP_743160.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP NP_743161.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway NP_743162.1 catalyzes the degradation of arginine to citruline and ammonia NP_743163.1 similar to GB:Z21958, GB:M25668, GB:L12563, GB:U01828, SP:P11137, GB:U32995, GB:U34059, GB:U34061, GB:U34064, GB:U34065, GB:U34069, GB:U34060, GB:U34062, GB:U34063, GB:U34066, PID:1850617, PID:187381, and PID:409875; identified by sequence similarity NP_743164.1 similar to GB:Z21958, GB:M25668, GB:L12563, GB:U01828, SP:P11137, GB:U32995, GB:U34059, GB:U34061, GB:U34064, GB:U34065, GB:U34069, GB:U34060, GB:U34062, GB:U34063, GB:U34066, PID:1850617, PID:187381, and PID:409875; identified by sequence similarity NP_743165.1 similar to GB:M15660, SP:P12256, and PID:143306; identified by sequence similarity NP_743166.1 similar to GP:3091146, and GP:8163798; identified by sequence similarity NP_743167.1 similar to GP:4838477; identified by sequence similarity NP_743170.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate NP_743171.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate NP_743172.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate NP_743173.1 similar to GB:L10328, SP:P26218, PID:290568, GB:L10328, SP:P26218, and PID:290568; identified by sequence similarity NP_743174.1 identified by match to PFAM protein family HMM PF02518 NP_743175.1 similar to GB:M95678, SP:Q00722, PID:190040, GB:M95678, SP:Q00722, and PID:190040; identified by sequence similarity NP_743176.1 identified by match to PFAM protein family HMM PF01547 NP_743177.1 similar to GP:4090539, and GP:4090539; identified by sequence similarity NP_743178.1 identified by match to TIGR protein family HMM TIGR01095 NP_743179.1 identified by match to TIGR protein family HMM TIGR01187 NP_743180.1 similar to GB:M26683, GB:X60001, GB:S71513, GB:X14768, GB:M37719, GB:M24545, GB:M30816, GB:M31625, GB:M31626, GB:M28223, GB:M28224, GB:M28225, GB:M28226, GB:D26087, SP:P13500, GB:M26683, GB:X60001, GB:S71513, GB:X14768, GB:M37719, GB:M24545, GB:M30816, GB:M31625, GB:M31626, GB:M28223, GB:M28224, GB:M28225, GB:M28226, GB:D26087, and SP:P13500; identified by sequence similarity NP_743181.1 similar to GP:9949303; identified by sequence similarity NP_743182.2 Represses the expression of the zwf, eda, glp and gap NP_743183.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate NP_743184.1 catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone NP_743185.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate NP_743186.1 similar to SP:P42455; identified by sequence similarity NP_743187.1 similar to GP:9949959; identified by sequence similarity NP_743188.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides NP_743189.1 identified by match to PFAM protein family HMM PF03466 NP_743190.1 identified by match to PFAM protein family HMM PF01925 NP_743191.1 similar to GP:8894736; identified by sequence similarity NP_743192.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate NP_743193.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway NP_743194.1 identified by match to PFAM protein family HMM PF00884 NP_743195.1 similar to GP:4580028, and GP:4580028; identified by sequence similarity NP_743196.1 similar to GP:4580029, and GP:4580029; identified by sequence similarity NP_743197.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function NP_743198.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis NP_743199.1 similar to GP:9949932; identified by sequence similarity NP_743200.1 similar to GB:M95623, GB:X04217, GB:X04808, GB:D10608, GB:D12722, SP:P08397, PID:292385, PID:292386, PID:35305, PID:35307, and PID:35309; identified by sequence similarity NP_743201.1 similar to GB:M95623, GB:X04217, GB:X04808, GB:D10608, GB:D12722, SP:P08397, PID:292385, PID:292386, PID:35305, PID:35307, and PID:35309; identified by sequence similarity NP_743202.1 similar to GB:M95623, GB:X04217, GB:X04808, GB:D10608, GB:D12722, SP:P08397, PID:292385, PID:292386, PID:35305, PID:35307, and PID:35309; identified by sequence similarity NP_743203.1 similar to GP:3978485, GB:L20861, SP:P41221, and PID:348918; identified by sequence similarity NP_743204.1 similar to GB:X13589, GB:Y07508, GB:M22246, GB:S85356, GB:M74714, GB:J04127, GB:M30795, GB:M30796, GB:M30797, GB:M30798, GB:M30799, GB:M30800, GB:M30801, GB:M30802, GB:M30803, GB:M30804, GB:M18856, GB:M28420, GB:S58866, GB:S85075, GB:S52793, GB:M32245, GB:X55983, GB:D14473, GB:S67206, GB:L21982, GB:S52789, and SP:P11511; identified by sequence similarity NP_743206.1 similar to GB:M32793, SP:P15977, PID:146715, PID:606351, GB:U00096, PID:1789821, GB:M32793, SP:P15977, PID:146715, PID:606351, GB:U00096, and PID:1789821; identified by sequence similarity NP_743207.1 similar to GB:M62400, SP:P24046, PID:182911, GB:M62400, SP:P24046, and PID:182911; identified by sequence similarity NP_743208.1 identified by match to TIGR protein family HMM TIGR01420 NP_743209.1 similar to GB:M61856, GB:X56452, GB:L16869, GB:L16870, GB:L16871, GB:L16872, GB:L16873, GB:L16874, GB:L16875, GB:L16876, SP:P33260, PID:181300, PID:306327, PID:433672, GB:M61856, GB:X56452, GB:L16869, GB:L16870, GB:L16871, GB:L16872, GB:L16873, GB:L16874, GB:L16875, GB:L16876, SP:P33260, PID:181300, PID:306327, and PID:433672; identified by sequence similarity NP_743210.1 similar to GP:3297910, and GP:3297910; identified by sequence similarity NP_743211.1 similar to GP:3293033, and GP:3293033; identified by sequence similarity NP_743212.1 similar to GP:3293034, and GP:3293034; identified by sequence similarity NP_743213.1 similar to GP:3293035, and GP:3293035; identified by sequence similarity NP_743214.1 similar to GP:3293036; identified by sequence similarity NP_743215.1 similar to GP:3293037, and GP:3293037; identified by sequence similarity NP_743216.1 similar to GP:3293038, and GP:3293038; identified by sequence similarity NP_743217.1 similar to GP:11127894, GB:D10483, SP:P08203, GB:M15263, GB:M62646, GB:X56048, PID:145306, PID:147317, PID:216481, PID:40939, GB:U00096, and PID:1786247; identified by sequence similarity NP_743218.1 similar to GP:9968714, GB:K01316, SP:P01857, SP:P01859, SP:P01860, SP:P01861, PID:184759, PID:185291, PID:2414492, PID:2414494, PID:567112, PID:577056, and PID:683576; identified by sequence similarity NP_743219.1 identified by match to PFAM protein family HMM PF00912 NP_743220.1 identified by match to TIGR protein family HMM TIGR00913 NP_743221.1 similar to SP:P35646, GB:Z12609, and PID:41331; identified by sequence similarity NP_743222.1 similar to GB:M76979, GB:M90439, GB:U29953, SP:P36955, PID:1144299, and PID:1732049; identified by sequence similarity NP_743223.1 identified by match to TIGR protein family HMM TIGR00586 NP_743224.1 similar to GB:X59618, SP:P31350, and PID:36155; identified by sequence similarity NP_743225.1 identified by match to TIGR protein family HMM TIGR01738 NP_743227.1 identified by match to PFAM protein family HMM PF00072 NP_743228.1 identified by match to PFAM protein family HMM PF02518 NP_743229.1 similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, and PID:553171; identified by sequence similarity NP_743230.1 similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, and PID:553171; identified by sequence similarity NP_743231.1 identified by match to TIGR protein family HMM TIGR01726 NP_743232.1 similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, and PID:553171; identified by sequence similarity NP_743233.1 identified by match to PFAM protein family HMM PF00560 NP_743234.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane NP_743235.1 similar to GP:3358093, SP:P33178, SP:P00457, and PID:142057; identified by sequence similarity NP_743236.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP NP_743237.1 similar to GP:3299802, and GP:3299802; identified by sequence similarity NP_743238.1 similar to GB:U14003, SP:P09743, GB:M60917, PID:147309, PID:537224, GB:U00096, and PID:1790844; identified by sequence similarity NP_743239.1 identified by match to TIGR protein family HMM TIGR00968 NP_743240.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation NP_743241.1 identified by match to PFAM protein family HMM PF00384 NP_743242.1 identified by match to TIGR protein family HMM TIGR00365 NP_743243.1 similar to GB:X69292, GB:S67240, SP:P35749, PID:2104553, PID:2352947, and PID:36507; identified by sequence similarity NP_743244.1 similar to GB:S45627, GB:S45629, GB:S45636, GB:S45637, GB:S45639, GB:S45640, GB:S45635, GB:M16594, GB:X65726, GB:X65727, GB:X65728, GB:X65729, GB:X65730, GB:X65731, GB:X65732, SP:P08263, SP:P09210, PID:306811, PID:825605, and PID:825606; identified by sequence similarity NP_743245.1 identified by match to PFAM protein family HMM PF00578 NP_743246.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) NP_743247.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis NP_743248.1 identified by match to PFAM protein family HMM PF00691 NP_743249.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming NP_743251.1 similar to GB:M28825, GB:M22080, GB:M22163, GB:M22164, GB:M22165, GB:M22166, GB:M22167, GB:X79309, GB:X79308, GB:M27735, GB:M14663, SP:P06126, PID:180046, PID:530884, GB:M28825, GB:M22080, GB:M22163, GB:M22164, GB:M22165, GB:M22166, GB:M22167, GB:X79309, GB:X79308, GB:M27735, GB:M14663, SP:P06126, PID:180046, and PID:530884; identified by sequence similarity NP_743252.1 similar to GP:9949642; identified by sequence similarity NP_743253.1 identified by match to PFAM protein family HMM PF00730 NP_743254.1 identified by match to PFAM protein family HMM PF02508 NP_743255.1 identified by match to PFAM protein family HMM PF04205 NP_743256.1 identified by match to PFAM protein family HMM PF03116 NP_743257.1 similar to GB:X54107, and PID:48759; identified by sequence similarity NP_743258.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content NP_743259.1 similar to SP:P45135; identified by sequence similarity NP_743260.1 similar to GP:13625473, GB:M84993, SP:P26462, GB:X52093, and PID:154021; identified by sequence similarity NP_743261.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis NP_743263.1 identified by match to PFAM protein family HMM PF00149 NP_743264.1 similar to GB:X56013, and PID:42450; identified by sequence similarity NP_743266.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA NP_743267.1 similar to GP:15075932; identified by sequence similarity NP_743269.1 identified by match to PFAM protein family HMM PF01804 NP_743270.1 identified by match to PFAM protein family HMM PF00155 NP_743271.1 identified by match to PFAM protein family HMM PF00132 NP_743272.1 identified by match to PFAM protein family HMM PF01411 NP_743273.1 similar to GP:9947836; identified by sequence similarity NP_743274.1 similar to GP:9858119; identified by sequence similarity NP_743275.1 similar to GP:9946947; identified by sequence similarity NP_743277.1 similar to GB:M14107, GB:M10133, SP:P08716, SP:P10089, GB:M81823, PID:146380, PID:146383, and PID:150683; identified by sequence similarity NP_743279.1 similar to SP:Q01624, and PID:46680; identified by sequence similarity NP_743280.1 identified by match to PFAM protein family HMM PF02810 NP_743281.1 identified by match to PFAM protein family HMM PF00126 NP_743282.1 identified by match to PFAM protein family HMM PF00691 NP_743283.1 identified by match to PFAM protein family HMM PF00691 NP_743286.1 helicase involved in DNA repair and perhaps also replication NP_743287.1 similar to GB:X00734, SP:P04350, SP:P05217, SP:P07437, PID:35959, PID:496887, and PID:897763; identified by sequence similarity NP_743288.1 similar to GB:X07881, SP:P02812, SP:P04281, PID:296669, GB:U09060, GB:U09061, PID:483862, PID:483864, PID:520411, PID:553383, PID:553384, PID:563395, PID:563399, PID:563411, PID:563415, PID:563424, PID:563426, PID:563428, PID:563430, PID:563434, PID:563446, PID:563466, PID:563475, PID:563479, PID:563483, PID:563485, PID:609461, PID:836630, PID:860982, PID:940525, PID:951285, and PID:976302; identified by sequence similarity NP_743289.1 identified by match to PFAM protein family HMM PF00691 NP_743290.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate NP_743292.1 similar to GP:5758657; identified by sequence similarity NP_743293.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH NP_743294.1 similar to GP:6723233; identified by sequence similarity NP_743295.1 identified by match to TIGR protein family HMM TIGR00136 NP_743297.1 similar to GP:8571415, and GP:8571415; identified by sequence similarity NP_743298.1 identified by match to TIGR protein family HMM TIGR00968 NP_743299.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine NP_743300.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine NP_743301.1 similar to GB:M30515, GB:M63599, GB:M20009, GB:X17290, GB:X17288, GB:X17369, GB:X17289, GB:M13577, GB:M30047, GB:M30516, GB:L18865, GB:L18866, GB:X17286, GB:X17287, SP:P02686, PID:187403, and PID:307161; identified by sequence similarity NP_743302.1 similar to GB:Z11566, GB:J04991, GB:X53305, GB:M31303, GB:D28428, GB:X94912, SP:P16949, PID:1246757, PID:189388, PID:189426, PID:35595, and PID:57870; identified by sequence similarity NP_743304.1 identified by match to TIGR protein family HMM TIGR01505 NP_743305.1 identified by match to PFAM protein family HMM PF00990 NP_743306.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA NP_743311.1 similar to GP:9949434; identified by sequence similarity NP_743313.1 identified by match to TIGR protein family HMM TIGR01730 NP_743315.1 identified by match to PFAM protein family HMM PF00563 NP_743316.1 similar to GP:7242806, GB:X59244, GB:X52358, SP:P17038, SP:P17040, SP:P28160, PID:184450, PID:38032, PID:930090, and PID:930092; identified by sequence similarity NP_743317.1 identified by match to PFAM protein family HMM PF01226 NP_743318.1 catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis NP_743319.1 identified by match to PFAM protein family HMM PF03631 NP_743320.1 similar to GP:10174241; identified by sequence similarity NP_743321.1 similar to GB:J04208, GB:L08114, GB:L33842, SP:P12268, PID:1702964, PID:292240, PID:307066, and PID:602458; identified by sequence similarity NP_743322.1 similar to GB:X04588, GB:J00312, GB:M12128, SP:P12324, PID:37424, and PID:553799; identified by sequence similarity NP_743323.1 identified by match to PFAM protein family HMM PF00970 NP_743324.1 similar to GP:3169721; identified by sequence similarity NP_743325.1 similar to GP:14523095; identified by sequence similarity NP_743326.1 identified by match to PFAM protein family HMM PF03450 NP_743327.1 similar to GP:2224837, GB:L20121, GB:L20122, GB:Z23115, SP:Q07817, PID:510901, and PID:623237; identified by sequence similarity NP_743328.2 similar to GP:15140814, SP:P25060, GB:X56183, and PID:45442; identified by sequence similarity NP_743329.1 similar to GP:10173315; identified by sequence similarity NP_743330.1 similar to GP:7414553, and GP:15073038; identified by sequence similarity NP_743331.1 similar to GP:5420005, and GP:15160260; identified by sequence similarity NP_743333.1 similar to GP:5091482; identified by sequence similarity NP_743337.1 Catalyzes the rate-limiting step in dNTP synthesis NP_743338.1 similar to GP:6689151; identified by sequence similarity NP_743339.1 Catalyzes the rate-limiting step in dNTP synthesis NP_743341.1 similar to GP:9947080, and GP:9947080; identified by sequence similarity NP_743342.1 identified by match to PFAM protein family HMM PF02518 NP_743343.1 similar to GB:M12272, GB:X04299, GB:X04350, GB:M37068, SP:P00325, SP:P00326, SP:P07327, PID:178148, PID:28404, PID:598143, and PID:825622; identified by sequence similarity NP_743344.1 identified by match to PFAM protein family HMM PF01738 NP_743346.1 similar to GB:X12387, SP:P05184, SP:P08684, SP:P20815, PID:181354, PID:181372, PID:181374, PID:219963, PID:35911, and PID:510086; identified by sequence similarity NP_743347.1 similar to GP:9947105, and GP:9947105; identified by sequence similarity NP_743348.1 involved in the transport of C4-dicarboxylates across the membrane NP_743349.1 identified by match to TIGR protein family HMM TIGR00104 NP_743351.1 identified by match to PFAM protein family HMM PF01479 NP_743352.1 similar to GP:9947377; identified by sequence similarity NP_743357.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit NP_743358.1 similar to GB:J04144, GB:A00914, SP:P12821, SP:P22966, PID:14653, and PID:178286; identified by sequence similarity NP_743360.1 similar to SP:P30016; identified by sequence similarity NP_743362.1 identified by match to PFAM protein family HMM PF03706 NP_743363.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function NP_743365.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) NP_743366.1 identified by match to PFAM protein family HMM PF03573 NP_743367.1 similar to GP:15154966; identified by sequence similarity NP_743368.1 similar to GP:9946867; identified by sequence similarity NP_743369.1 similar to GP:9946868; identified by sequence similarity NP_743370.1 identified by match to PFAM protein family HMM PF00210 NP_743372.1 similar to GP:7799507; identified by sequence similarity NP_743373.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes NP_743374.1 identified by match to TIGR protein family HMM TIGR01033 NP_743375.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity NP_743376.1 plays an essential role in ATP-dependent branch migration of the Holliday junction NP_743377.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration NP_743378.1 similar to GP:5514775, and GP:5514775; identified by sequence similarity NP_743379.1 similar to GP:5514776, and GP:5514776; identified by sequence similarity NP_743380.1 similar to GP:5514777, and GP:5514777; identified by sequence similarity NP_743381.1 similar to GP:5514778, and GP:5514778; identified by sequence similarity NP_743382.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA NP_743383.1 similar to GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, PID:553291, GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, PID:553291, GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, PID:553291, GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, and PID:553291; identified by sequence similarity NP_743384.1 similar to GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, PID:553291, GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, and PID:553291; identified by sequence similarity NP_743385.1 similar to GP:5514780; identified by sequence similarity NP_743386.1 similar to GP:5514781; identified by sequence similarity NP_743387.1 identified by match to PFAM protein family HMM PF01545 NP_743388.1 identified by match to PFAM protein family HMM PF00672 NP_743389.1 identified by match to PFAM protein family HMM PF00324 NP_743390.1 similar to GB:Z14982, GB:X62598, GB:X66401, GB:U17496, GB:U17497, GB:U32863, SP:P28062, PID:1045469, PID:1045471, PID:1054747, PID:38482, PID:596140, PID:596142, GB:Z14982, GB:X62598, GB:X66401, GB:U17496, GB:U17497, GB:U32863, SP:P28062, PID:1045469, PID:1045471, PID:1054747, PID:38482, PID:596140, and PID:596142; identified by sequence similarity NP_743391.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate NP_743392.1 identified by match to PFAM protein family HMM PF01435 NP_743393.1 similar to GP:9946916; identified by sequence similarity NP_743394.1 similar to SP:P10131, and PID:44218; identified by sequence similarity NP_743395.1 identified by match to PFAM protein family HMM PF00578 NP_743396.1 similar to SP:P23483; identified by sequence similarity NP_743397.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis NP_743398.1 similar to GP:9946921; identified by sequence similarity NP_743399.1 similar to GP:9946922; identified by sequence similarity NP_743400.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase NP_743401.1 similar to GP:9108007; identified by sequence similarity NP_743406.1 similar to GP:10179993; identified by sequence similarity NP_743408.1 similar to SP:P37639, PID:466653, GB:U00096, and PID:1789933; identified by sequence similarity NP_743409.1 similar to GB:Y00486, GB:M16446, SP:P07741, PID:178867, and PID:28819; identified by sequence similarity NP_743410.1 similar to GP:4323583, GB:L01112, SP:P45375, PID:145016, and PID:1247706; identified by sequence similarity NP_743411.2 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate NP_743412.1 similar to GB:L01112, SP:P45375, PID:145016, and PID:1247706; identified by sequence similarity NP_743413.1 similar to GB:L20868, GB:D23660, GB:T11045, GB:X73974, SP:P36578, PID:432359, and PID:560476; identified by sequence similarity NP_743414.1 similar to GP:6049281, and GP:6049281; identified by sequence similarity NP_743415.1 identified by match to TIGR protein family HMM TIGR00136 NP_743416.1 identified by match to TIGR protein family HMM TIGR01722 NP_743417.1 similar to GB:X13543, and GB:X13541; identified by sequence similarity NP_743418.1 identified by match to PFAM protein family HMM PF02567 NP_743419.1 identified by match to PFAM protein family HMM PF03600 NP_743420.1 similar to GP:6723233; identified by sequence similarity NP_743421.1 Involved in the metabolism of aromatic amino acids NP_743422.1 identified by match to PFAM protein family HMM PF03466 NP_743423.1 similar to GB:X12556, SP:P10911, PID:30482, and PID:825688; identified by sequence similarity NP_743424.1 similar to GB:L03558, GB:U46692, SP:P04080, PID:1235678, PID:291927, and GB:L13434; identified by sequence similarity NP_743425.1 similar to GB:M23114, GB:M23116, GB:M23278, GB:M23115, SP:P16614, SP:P16615, PID:306850, PID:306851, and PID:567108; identified by sequence similarity NP_743426.1 similar to GB:L08239, and PID:950412; identified by sequence similarity NP_743428.1 SohA; PrlF; involved in protein secretion; when overproduced or mutated, it induces growth defect and increased export of a reporter protein; a PrlF mutation induces the activity of the Lon protease, and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation NP_743429.1 identified by match to PFAM protein family HMM PF00582 NP_743430.1 identified by match to PFAM protein family HMM PF03466 NP_743431.1 similar to GP:7677418; identified by sequence similarity NP_743432.1 similar to GP:7677417; identified by sequence similarity NP_743433.1 identified by match to PFAM protein family HMM PF02321 NP_743434.1 identified by match to PFAM protein family HMM PF02254 NP_743435.1 similar to GP:9950061; identified by sequence similarity NP_743437.1 identified by match to PFAM protein family HMM PF00483 NP_743438.1 similar to GB:M26665, GB:M18372, GB:L05514, SP:P15515, SP:P15516, PID:179466, PID:184058, PID:292146, GB:M26665, GB:M18372, GB:L05514, SP:P15515, SP:P15516, PID:179466, PID:184058, and PID:292146; identified by sequence similarity NP_743439.1 similar to GP:2920569, GB:U08277, GB:U08276, GB:U25638, GB:M63506, GB:U58978, SP:P01911, SP:P01912, SP:P04229, SP:P13758, SP:P13760, PID:1373011, PID:2231538, PID:386938, PID:490048, PID:533431, PID:533433, PID:533464, PID:540444, PID:540448, PID:540450, PID:553341, PID:553342, PID:553345, PID:553577, PID:553578, PID:553580, PID:553583, PID:553585, PID:602463, PID:602465, PID:688440, PID:703086, PID:825607, PID:841154, PID:841156, PID:847881, PID:847947, PID:860984, PID:862604, PID:902552, PID:929629, PID:929993, PID:971165, and PID:987615; identified by sequence similarity NP_743440.1 similar to GB:U08277, GB:U08276, GB:U25638, GB:M63506, GB:U58978, SP:P01911, SP:P01912, SP:P04229, SP:P13758, SP:P13760, PID:1373011, PID:2231538, PID:386938, PID:490048, PID:533431, PID:533433, PID:533464, PID:540444, PID:540448, PID:540450, PID:553341, PID:553342, PID:553345, PID:553577, PID:553578, PID:553580, PID:553583, PID:553585, PID:602463, PID:602465, PID:688440, PID:703086, PID:825607, PID:841154, PID:841156, PID:847881, PID:847947, PID:860984, PID:862604, PID:902552, PID:929629, PID:929993, PID:971165, PID:987615, GB:U08277, GB:U08276, GB:U25638, GB:M63506, GB:U58978, SP:P01911, SP:P01912, SP:P04229, SP:P13758, SP:P13760, PID:1373011, PID:2231538, PID:386938, PID:490048, PID:533431, PID:533433, PID:533464, PID:540444, PID:540448, PID:540450, PID:553341, PID:553342, PID:553345, PID:553577, PID:553578, PID:553580, PID:553583, PID:553585, PID:602463, PID:602465, PID:688440, PID:703086, PID:825607, PID:841154, PID:841156, PID:847881, PID:847947, PID:860984, PID:862604, PID:902552, PID:929629, PID:92 NP_743441.1 Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export NP_743442.1 similar to GP:2920566; identified by sequence similarity NP_743443.1 similar to GB:M30515, GB:M63599, GB:M20009, GB:X17290, GB:X17288, GB:X17369, GB:X17289, GB:M13577, GB:M30047, GB:M30516, GB:L18865, GB:L18866, GB:X17286, GB:X17287, SP:P02686, PID:187403, PID:307161, GB:M30515, GB:M63599, GB:M20009, GB:X17290, GB:X17288, GB:X17369, GB:X17289, GB:M13577, GB:M30047, GB:M30516, GB:L18865, GB:L18866, GB:X17286, GB:X17287, SP:P02686, PID:187403, and PID:307161; identified by sequence similarity NP_743445.1 similar to GB:U00016, PID:466971, GB:U00016, and PID:466971; identified by sequence similarity NP_743446.1 similar to GB:X06144, SP:P20921, and PID:45919; identified by sequence similarity NP_743448.1 similar to GB:U00020, PID:467113, GB:U00020, and PID:467113; identified by sequence similarity NP_743449.1 identified by match to PFAM protein family HMM PF03883 NP_743450.1 identified by match to PFAM protein family HMM PF01522 NP_743451.1 identified by match to PFAM protein family HMM PF02562 NP_743452.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis NP_743453.1 similar to GB:J02971, GB:J03478, GB:X12706, GB:X04688, GB:X12705, SP:P05113, PID:288310, PID:29393, PID:33836, PID:386822, and PID:386823; identified by sequence similarity NP_743454.1 similar to SP:P30749; identified by sequence similarity NP_743455.2 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation NP_743456.1 similar to GB:M55406, SP:Q02505, PID:553594, GB:M55406, SP:Q02505, and PID:553594; identified by sequence similarity NP_743457.1 similar to GB:X17025, and PID:488750; identified by sequence similarity NP_743458.1 identified by match to TIGR protein family HMM TIGR01726 NP_743459.1 similar to GP:2961078; identified by sequence similarity NP_743460.1 identified by match to TIGR protein family HMM TIGR00968 NP_743461.1 identified by match to PFAM protein family HMM PF00595 NP_743462.1 identified by match to PFAM protein family HMM PF01784 NP_743463.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP NP_743464.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis NP_743465.1 similar to GP:1942132; identified by sequence similarity NP_743466.1 similar to SP:Q06583, GB:M31013, GB:D11393, SP:P35579, PID:1679804, PID:189036, and PID:553596; identified by sequence similarity NP_743467.1 similar to GB:M74578, PID:452832, and PID:455428; identified by sequence similarity NP_743468.1 catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine NP_743469.1 similar to GP:9950675; identified by sequence similarity NP_743470.1 similar to GP:9950674; identified by sequence similarity NP_743471.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_743472.1 identified by match to PFAM protein family HMM PF03969 NP_743473.1 identified by match to PFAM protein family HMM PF00165 NP_743474.1 identified by match to TIGR protein family HMM TIGR01293 NP_743475.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit NP_743476.1 forms a direct contact with the tRNA during translation NP_743477.1 identified by match to PFAM protein family HMM PF00355 NP_743478.1 similar to GB:M28826, GB:M22168, GB:M22169, GB:M22170, GB:M22171, GB:M22172, GB:M22173, GB:M14665, SP:P29016, PID:180050, PID:180056, and PID:180064; identified by sequence similarity NP_743479.1 similar to GP:9950662; identified by sequence similarity NP_743480.1 similar to GP:9864180; identified by sequence similarity NP_743481.1 similar to GB:S50157, GB:X60221, SP:P24539, and PID:509291; identified by sequence similarity NP_743483.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate NP_743484.1 identified by match to TIGR protein family HMM TIGR00252 NP_743486.1 identified by match to PFAM protein family HMM PF00590 NP_743487.1 MraZ; UPF0040; crystal structure shows similarity to AbrB NP_743488.1 similar to GP:9950652; identified by sequence similarity NP_743489.1 similar to GB:M11186, GB:M62611, SP:P01178, PID:189411, PID:386991, and PID:825699; identified by sequence similarity NP_743490.1 similar to GB:X65873, SP:P33176, PID:34083, GB:X74764, SP:Q16832, and PID:433338; identified by sequence similarity NP_743491.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate NP_743492.1 similar to GB:X64229, SP:P35659, and PID:30503; identified by sequence similarity NP_743493.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan NP_743494.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation NP_743495.1 identified by match to PFAM protein family HMM PF01098 NP_743496.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis NP_743497.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis NP_743498.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli NP_743499.1 identified by match to PFAM protein family HMM PF03799 NP_743500.1 similar to GP:2707899; identified by sequence similarity NP_743501.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function NP_743502.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis NP_743503.1 similar to GP:9950637; identified by sequence similarity NP_743504.2 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins NP_743505.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate NP_743506.1 similar to GP:15076291; identified by sequence similarity NP_743507.1 similar to GP:9950631; identified by sequence similarity NP_743508.1 identified by match to TIGR protein family HMM TIGR00636 NP_743509.1 identified by match to PFAM protein family HMM PF02518 NP_743510.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate NP_743511.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription NP_743512.1 identified by match to PFAM protein family HMM PF00924 NP_743513.1 similar to GP:1619595; identified by sequence similarity NP_743514.1 similar to SP:P25149, GB:X52480, PID:580865, PID:580945, and GB:AL009126; identified by sequence similarity NP_743515.1 identified by match to TIGR protein family HMM TIGR00589 NP_743516.1 similar to GP:9950620, and GP:9950620; identified by sequence similarity NP_743517.1 similar to GP:9950618; identified by sequence similarity NP_743518.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein NP_743519.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring NP_743520.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth NP_743521.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_743523.1 similar to GP:9950548; identified by sequence similarity NP_743524.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates NP_743525.1 similar to GP:9950539, GB:Z31695, and PID:469144; identified by sequence similarity NP_743526.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine NP_743527.1 identified by match to PFAM protein family HMM PF03706 NP_743528.1 similar to GP:9950535, and GP:9950535; identified by sequence similarity NP_743529.1 identified by match to PFAM protein family HMM PF00534 NP_743530.1 similar to GB:M90644, SP:P32001, PID:144139, GB:M90644, SP:P32001, and PID:144139; identified by sequence similarity NP_743531.1 identified by match to TIGR protein family HMM TIGR01428 NP_743532.1 identified by match to PFAM protein family HMM PF01384 NP_743533.1 similar to GP:9950512; identified by sequence similarity NP_743534.1 similar to GB:X15341, SP:P12074, PID:30153, GB:X15341, SP:P12074, and PID:30153; identified by sequence similarity NP_743535.1 similar to SP:Q51955, and SP:Q51955; identified by sequence similarity NP_743536.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA NP_743537.1 similar to GP:5091487, GB:U08275, GB:M74032, SP:P01911, SP:P01912, SP:P04229, SP:P13758, SP:P13759, SP:P13760, PID:1143290, PID:483934, PID:490048, PID:533429, PID:540448, PID:540450, PID:553341, PID:553342, PID:553345, PID:553577, PID:553580, PID:553581, PID:553583, PID:602463, PID:639905, PID:688440, PID:695363, PID:695364, PID:703086, PID:825462, PID:825607, PID:841152, PID:841154, PID:847881, PID:860984, PID:862604, PID:902552, PID:929629, PID:971165, PID:984933, PID:987658, and PID:995769; identified by sequence similarity NP_743538.1 Catalyzes the cycloisomerization of cis,cis-muconate NP_743539.1 similar to GP:5091485, and GP:2935027; identified by sequence similarity NP_743540.1 similar to GP:5091484, and GP:5091484; identified by sequence similarity NP_743541.1 similar to GP:5091483, and GP:5091483; identified by sequence similarity NP_743542.1 similar to GP:5091482, and GP:5091482; identified by sequence similarity NP_743543.1 similar to GP:5091481, and GP:5091481; identified by sequence similarity NP_743544.1 similar to GP:3319233, and GP:3319233; identified by sequence similarity NP_743545.1 similar to GP:5091480, and GP:5091480; identified by sequence similarity NP_743546.1 similar to GP:8163734, and GP:13183097; identified by sequence similarity NP_743547.1 similar to GP:6002943; identified by sequence similarity NP_743550.1 similar to GP:9945879; identified by sequence similarity NP_743551.1 identified by match to PFAM protein family HMM PF02254 NP_743552.1 identified by match to PFAM protein family HMM PF03466 NP_743553.1 similar to GB:M36340, GB:M84326, SP:P16587, SP:P32889, PID:178156, PID:178164, and PID:178983; identified by sequence similarity NP_743554.1 identified by match to PFAM protein family HMM PF00165 NP_743555.1 similar to GP:9948055; identified by sequence similarity NP_743557.1 similar to GP:10174898, and GP:15074361; identified by sequence similarity NP_743559.1 identified by match to PFAM protein family HMM PF00083 NP_743560.1 similar to GB:X14046, SP:P11049, and PID:29794; identified by sequence similarity NP_743561.1 similar to SP:P13633; identified by sequence similarity NP_743562.1 similar to GB:K03192, and PID:181322; identified by sequence similarity NP_743563.1 similar to GP:14024253, GB:U11702, and PID:510692; identified by sequence similarity NP_743566.1 identified by match to PFAM protein family HMM PF00916 NP_743567.1 similar to GP:3551793, and GP:3551793; identified by sequence similarity NP_743569.1 identified by match to PFAM protein family HMM PF00990 NP_743570.1 identified by match to PFAM protein family HMM PF00378 NP_743571.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine NP_743572.1 similar to GB:M94964, PID:531810, and SP:P45602; identified by sequence similarity NP_743573.1 similar to GP:3164104; identified by sequence similarity NP_743574.1 similar to GP:11128404; identified by sequence similarity NP_743575.1 similar to GP:11128403; identified by sequence similarity NP_743576.1 similar to GP:11128402; identified by sequence similarity NP_743577.1 similar to GP:9946642; identified by sequence similarity NP_743578.1 identified by match to PFAM protein family HMM PF00072 NP_743579.1 similar to GP:9946644, GP:9946644, and GP:11128400; identified by sequence similarity NP_743581.1 identified by match to PFAM protein family HMM PF01571 NP_743582.1 identified by match to PFAM protein family HMM PF03937 NP_743584.1 catalyzes the formation of oxaloacetate from L-aspartate NP_743585.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor regulates genes involved in alginate biosynthesis NP_743586.1 identified by match to PFAM protein family HMM PF03873 NP_743587.1 identified by match to PFAM protein family HMM PF03888 NP_743588.1 similar to GB:Z31695, PID:469144, GB:Z31695, and PID:469144; identified by sequence similarity NP_743589.1 binds to the ribosome on the universally-conserved alpha-sarcin loop NP_743590.1 similar to GB:L19182, PID:307151, GB:L19182, and PID:307151; identified by sequence similarity NP_743591.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity NP_743592.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome NP_743593.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA NP_743594.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) NP_743595.1 identified by match to TIGR protein family HMM TIGR01386 NP_743596.1 similar to GP:12484568; identified by sequence similarity NP_743598.1 identified by match to TIGR protein family HMM TIGR00452 NP_743599.1 identified by match to TIGR protein family HMM TIGR00740 NP_743600.1 similar to GP:9946667; identified by sequence similarity NP_743601.1 identified by match to PFAM protein family HMM PF00004 NP_743602.1 identified by match to PFAM protein family HMM PF01011 NP_743603.1 similar to GB:M26683, GB:X60001, GB:S71513, GB:X14768, GB:M37719, GB:M24545, GB:M30816, GB:M31625, GB:M31626, GB:M28223, GB:M28224, GB:M28225, GB:M28226, GB:D26087, SP:P13500, GB:M26683, GB:X60001, GB:S71513, GB:X14768, GB:M37719, GB:M24545, GB:M30816, GB:M31625, GB:M31626, GB:M28223, GB:M28224, GB:M28225, GB:M28226, GB:D26087, and SP:P13500; identified by sequence similarity NP_743604.1 identified by match to PFAM protein family HMM PF00593 NP_743606.1 similar to GP:4726002; identified by sequence similarity NP_743607.1 similar to GP:7741588, and GP:7741588; identified by sequence similarity NP_743608.1 similar to GB:J02677, SP:P05102, and PID:148949; identified by sequence similarity NP_743609.1 identified by match to PFAM protein family HMM PF03734 NP_743610.1 identified by match to PFAM protein family HMM PF00293 NP_743611.1 identified by match to PFAM protein family HMM PF00293 NP_743612.1 similar to GB:J00124, GB:X59475, GB:M28646, SP:P02533, and PID:386848; identified by sequence similarity NP_743613.1 similar to GP:9949921; identified by sequence similarity NP_743614.1 identified by match to PFAM protein family HMM PF02592 NP_743615.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis NP_743616.1 identified by match to PFAM protein family HMM PF03605 NP_743617.1 identified by match to PFAM protein family HMM PF03471 NP_743618.1 similar to GP:9949915; identified by sequence similarity NP_743619.1 identified by match to PFAM protein family HMM PF00448 NP_743620.2 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity NP_743621.1 Essential for efficient processing of 16S rRNA NP_743622.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA NP_743623.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site NP_743624.1 identified by match to PFAM protein family HMM PF01662 NP_743625.1 identified by match to PFAM protein family HMM PF04290 NP_743626.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs NP_743627.1 similar to GP:3135321, GB:Z11559, GB:M58510, SP:P21399, PID:33963, and PID:896473; identified by sequence similarity NP_743628.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine NP_743629.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine NP_743631.1 similar to GP:9948826; identified by sequence similarity NP_743633.1 identified by match to PFAM protein family HMM PF02515 NP_743634.1 similar to GP:9949892; identified by sequence similarity NP_743635.1 similar to GB:D00173, GB:S46963, SP:P11712, SP:P11713, SP:P33259, SP:P33261, PID:181362, PID:181364, PID:181366, and PID:219571; identified by sequence similarity NP_743636.1 similar to GP:6049281; identified by sequence similarity NP_743637.1 similar to GP:3603326; identified by sequence similarity NP_743638.1 similar to GP:3603340, and GP:3603340; identified by sequence similarity NP_743639.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation NP_743640.1 similar to SP:P37640, PID:466657, GB:U00096, and PID:1789937; identified by sequence similarity NP_743641.1 similar to SP:P37640, PID:466657, GB:U00096, and PID:1789937; identified by sequence similarity NP_743642.1 identified by match to TIGR protein family HMM TIGR00968 NP_743644.1 similar to SP:P37081, GB:X66059, and PID:43941; identified by sequence similarity NP_743645.1 similar to GP:9949877; identified by sequence similarity NP_743646.1 identified by match to PFAM protein family HMM PF00672 NP_743647.1 identified by match to PFAM protein family HMM PF01584 NP_743648.1 identified by match to PFAM protein family HMM PF00515 NP_743649.1 identified by match to PFAM protein family HMM PF01584 NP_743650.1 identified by match to PFAM protein family HMM PF00072 NP_743651.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins NP_743652.1 identified by match to PFAM protein family HMM PF00990 NP_743653.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 NP_743654.1 identified by match to PFAM protein family HMM PF00440 NP_743655.1 similar to GP:9949863; identified by sequence similarity NP_743656.1 similar to GP:9949862; identified by sequence similarity NP_743657.1 identified by match to TIGR protein family HMM TIGR01738 NP_743659.1 similar to GP:9949856; identified by sequence similarity NP_743661.1 similar to GP:9949852; identified by sequence similarity NP_743662.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate NP_743663.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP NP_743664.1 similar to GP:9949849, and GP:9949849; identified by sequence similarity NP_743665.1 similar to GP:9949848; identified by sequence similarity NP_743666.1 similar to GP:9949847; identified by sequence similarity NP_743667.1 similar to SP:P37660, PID:466678, GB:U00096, and PID:1789961; identified by sequence similarity NP_743668.1 similar to GP:9949844; identified by sequence similarity NP_743670.1 similar to GP:9949843; identified by sequence similarity NP_743671.1 similar to GP:2950328; identified by sequence similarity NP_743672.1 identified by match to PFAM protein family HMM PF00440 NP_743673.1 identified by match to TIGR protein family HMM TIGR01730 NP_743674.1 identified by match to PFAM protein family HMM PF03599 NP_743675.1 similar to GP:9949838; identified by sequence similarity NP_743677.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA NP_743679.1 similar to SP:P08301, and PID:45470; identified by sequence similarity NP_743680.1 similar to GP:9947083, and GP:9947083; identified by sequence similarity NP_743681.1 identified by match to PFAM protein family HMM PF01209 NP_743682.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. NP_743683.1 similar to GP:3687658; identified by sequence similarity NP_743684.1 identified by match to PFAM protein family HMM PF00899 NP_743685.1 identified by match to PFAM protein family HMM PF02657 NP_743686.1 similar to GP:4520378, GB:M64855, GB:S71057, GB:M64856, GB:M64857, GB:X67171, GB:X93620, SP:P01594, SP:P01596, SP:P01597, SP:P01598, SP:P01600, SP:P01602, SP:P01606, SP:P01607, SP:P01608, SP:P01609, SP:P01611, SP:P04431, SP:P04432, SP:P80362, PID:185964, PID:185966, PID:185968, PID:470556, PID:470562, PID:470576, PID:470592, PID:470596, PID:470598, PID:470600, PID:470618, PID:483882, PID:483884, PID:483886, PID:483902, PID:506423, PID:561705, PID:563650, PID:567134, PID:567136, PID:567138, PID:567146, PID:567148, PID:567150, PID:567154, PID:567158, PID:567172, PID:575258, PID:587324, PID:587326, PID:587328, PID:587330, PID:587332, PID:587334, PID:598171, PID:619427, PID:619601, PID:619602, PID:619603, PID:619615, PID:619616, PID:619624, PID:632988, PID:642240, PID:642378, PID:663000, PID:663001, PID:722540, PID:732738, PID:732746, PID:736242, PID:736244, PID:758085, PID:758589, PID:758599, PID:758601, PID:762937, PID:790811, PID:791024, PID:791036, PID:860994, PID:861002, PID:896278, PID:940528, PID:940529 NP_743687.1 identified by match to TIGR protein family HMM TIGR00965 NP_743688.1 identified by match to TIGR protein family HMM TIGR01617 NP_743689.1 similar to GP:4520380, and GP:4520380; identified by sequence similarity NP_743690.1 similar to SP:P06524, GB:X02423, GB:X03933, GB:X16905, PID:154815, PID:39184, and PID:39186; identified by sequence similarity NP_743692.1 similar to GP:5823652, and GP:2570059; identified by sequence similarity NP_743695.1 similar to GP:2105134; identified by sequence similarity NP_743697.1 similar to GP:9949581; identified by sequence similarity NP_743698.1 similar to GP:4520381, and GP:4520381; identified by sequence similarity NP_743705.1 similar to GP:10432471, GB:U01100, PID:1220435, and PID:434023; identified by sequence similarity NP_743706.1 identified by match to PFAM protein family HMM PF00717 NP_743707.1 similar to GP:4539473; identified by sequence similarity NP_743708.1 similar to GP:8895171, and GP:8895171; identified by sequence similarity NP_743709.1 similar to GP:3294483, and SP:P07905; identified by sequence similarity NP_743710.1 similar to GP:6901638, and GP:6901638; identified by sequence similarity NP_743712.1 similar to GB:M15502, SP:P07954, PID:1545996, and PID:182794; identified by sequence similarity NP_743713.1 similar to GP:8895178, and GP:8895178; identified by sequence similarity NP_743715.1 similar to GB:X64057, SP:P28768, and PID:1364257; identified by sequence similarity NP_743716.1 similar to GP:6066815, GB:L04569, GB:M57971, GB:Z34811, GB:Z34812, GB:Z34821, GB:Z34822, GB:Z34809, GB:Z34810, GB:Z34813, GB:Z34814, GB:Z34815, GB:Z34816, GB:Z34817, GB:Z34818, GB:Z34819, GB:Z34820, GB:M57972, GB:M91370, GB:Z26294, GB:Z26295, PID:291895, PID:501073, PID:508183, PID:508185, PID:508187, PID:508189, PID:508191, PID:508193, PID:508195, PID:508197, PID:508199, PID:508201, PID:509048, PID:509068, PID:509168, PID:509178, PID:509341, and PID:509344; identified by sequence similarity NP_743718.1 similar to GP:6066821, and GP:6066821; identified by sequence similarity NP_743719.1 similar to GP:5059248, and GP:5059248; identified by sequence similarity NP_743720.1 similar to GP:5059249, and GP:13361062; identified by sequence similarity NP_743722.1 similar to GP:5059250, and GP:5059250; identified by sequence similarity NP_743723.1 similar to GP:6863115, SP:P17058, PID:46001, and PID:46126; identified by sequence similarity NP_743724.1 similar to GP:5059252, and GP:5059252; identified by sequence similarity NP_743727.1 similar to GP:6863120, and GP:6901597; identified by sequence similarity NP_743728.1 similar to GP:8895116, and GP:8895116; identified by sequence similarity NP_743729.1 similar to GP:8895117, and GP:8895117; identified by sequence similarity NP_743730.1 similar to GP:8895118, and GP:6863123; identified by sequence similarity NP_743731.1 similar to GP:6863124, and GP:8895119; identified by sequence similarity NP_743732.1 similar to GP:6863125, and GP:8895120; identified by sequence similarity NP_743733.1 similar to SP:P22704; identified by sequence similarity NP_743734.1 similar to GP:8895121, and GP:6863126; identified by sequence similarity NP_743735.1 similar to GP:8895124, and GP:8895124; identified by sequence similarity NP_743736.1 similar to GP:8895128, and GP:8895128; identified by sequence similarity NP_743737.1 similar to GP:8895123, and GP:8895123; identified by sequence similarity NP_743738.1 identified by match to PFAM protein family HMM PF02012 NP_743740.1 similar to GP:5453372; identified by sequence similarity NP_743742.1 similar to GP:9950930; identified by sequence similarity NP_743743.1 similar to GP:15076084; identified by sequence similarity NP_743744.1 identified by match to PFAM protein family HMM PF03977 NP_743745.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate NP_743746.1 Catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein NP_743747.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn NP_743748.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit NP_743749.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu NP_743750.1 Catalyzes the phosphorylation of UMP to UDP NP_743751.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs NP_743752.1 similar to GB:M88458, SP:P33947, and PID:31218; identified by sequence similarity NP_743753.1 identified by match to PFAM protein family HMM PF01148 NP_743754.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate NP_743755.1 identified by match to PFAM protein family HMM PF02163 NP_743756.1 identified by match to PFAM protein family HMM PF01103 NP_743757.1 identified by match to PFAM protein family HMM PF03938 NP_743758.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis NP_743759.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP NP_743760.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis NP_743761.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM NP_743762.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids NP_743763.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase NP_743764.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein NP_743765.1 similar to SP:P07603, GB:X02416, and PID:40831; identified by sequence similarity NP_743767.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer NP_743768.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis NP_743769.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis NP_743770.1 similar to GP:9949793; identified by sequence similarity NP_743771.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers NP_743772.1 identified by match to PFAM protein family HMM PF03466 NP_743773.1 identified by match to TIGR protein family HMM TIGR01751 NP_743774.1 identified by match to PFAM protein family HMM PF00756 NP_743775.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate NP_743776.1 catalyzes the modification of U13 in tRNA(Glu) NP_743777.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate NP_743778.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins NP_743779.1 similar to GP:7839531, and GP:7839531; identified by sequence similarity NP_743780.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses NP_743781.1 similar to GB:L01112, SP:P45375, PID:145016, and PID:1247706; identified by sequence similarity NP_743782.1 similar to GP:7243294, GB:M33146, SP:P21291, PID:181064, and PID:181071; identified by sequence similarity NP_743783.1 This protein performs the mismatch recognition step during the DNA repair process NP_743784.1 similar to GP:9946286; identified by sequence similarity NP_743785.1 similar to SP:P31667, PID:606346, GB:U00096, and PID:1789816; identified by sequence similarity NP_743786.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs NP_743787.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities NP_743788.1 similar to GP:9949773; identified by sequence similarity NP_743790.1 similar to GP:7579037, and GP:9949768; identified by sequence similarity NP_743791.1 similar to GP:7579038; identified by sequence similarity NP_743792.1 similar to GP:7579039, and GP:7579039; identified by sequence similarity NP_743793.1 similar to GP:7579040, and GP:9949759; identified by sequence similarity NP_743794.1 identified by match to PFAM protein family HMM PF03466 NP_743795.1 similar to SP:Q44532, GB:Z19054, SP:P35222, PID:38520, and PID:860988; identified by sequence similarity NP_743796.1 similar to GB:L16896, GB:M20677, SP:P10074, PID:1177229, PID:1177230, and PID:292935; identified by sequence similarity NP_743797.1 identified by match to PFAM protein family HMM PF03626 NP_743798.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs NP_743799.1 identified by match to PFAM protein family HMM PF03352 NP_743801.1 similar to GP:9946855, and GP:9946855; identified by sequence similarity NP_743802.1 similar to GP:9946856, and SP:P08692; identified by sequence similarity NP_743803.1 identified by match to PFAM protein family HMM PF00085 NP_743804.1 similar to GP:9946829; identified by sequence similarity NP_743806.1 Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes NP_743807.1 similar to GP:6273355, and GP:6273355; identified by sequence similarity NP_743808.1 identified by match to PFAM protein family HMM PF00072 NP_743809.1 identified by match to PFAM protein family HMM PF02518 NP_743810.1 similar to GP:7741879; identified by sequence similarity NP_743811.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide NP_743812.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S] NP_743813.1 identified by match to PFAM protein family HMM PF02824 NP_743814.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era NP_743816.1 similar to GB:M35128, GB:M35128, GB:X15263, GB:X52068, SP:P11229, PID:180535, PID:297406, PID:32318, PID:34451, GB:M35128, GB:M35128, GB:X15263, GB:X52068, SP:P11229, PID:180535, PID:297406, PID:32318, and PID:34451; identified by sequence similarity NP_743818.1 similar to GP:7212801; identified by sequence similarity NP_743820.1 similar to GP:9946848; identified by sequence similarity NP_743821.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate NP_743822.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis NP_743823.1 similar to GP:9946852; identified by sequence similarity NP_743824.1 identified by match to PFAM protein family HMM PF04087 NP_743825.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP NP_743826.1 identified by match to PFAM protein family HMM PF00877 NP_743827.1 identified by match to PFAM protein family HMM PF00877 NP_743829.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide NP_743830.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid NP_743831.1 similar to GB:U05040, and PID:460152; identified by sequence similarity NP_743832.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group NP_743833.1 cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase NP_743834.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation NP_743835.1 catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP NP_743836.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole NP_743837.1 similar to GB:L20469, GB:L35902, GB:L35903, GB:U25441, GB:U32499, SP:P35462, PID:579579, PID:806903, and PID:927342; identified by sequence similarity NP_743838.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole NP_743839.1 identified by match to PFAM protein family HMM PF00150 NP_743840.1 identified by match to PFAM protein family HMM PF03551 NP_743841.1 identified by match to TIGR protein family HMM TIGR00890 NP_743843.1 similar to SP:O08368; identified by sequence similarity NP_743845.1 identified by match to PFAM protein family HMM PF03466 NP_743846.1 similar to SP:P10384; identified by sequence similarity NP_743847.1 similar to GP:9947224, and GP:9947224; identified by sequence similarity NP_743848.1 similar to GP:9946697; identified by sequence similarity NP_743851.1 identified by match to PFAM protein family HMM PF02646 NP_743852.1 identified by match to PFAM protein family HMM PF03601 NP_743853.1 similar to GB:L09234, SP:P38607, and PID:291866; identified by sequence similarity NP_743854.1 similar to GP:8546897; identified by sequence similarity NP_743855.1 identified by match to PFAM protein family HMM PF00083 NP_743856.1 similar to GP:3738249; identified by sequence similarity NP_743857.1 identified by match to PFAM protein family HMM PF04241 NP_743858.1 identified by match to PFAM protein family HMM PF00893 NP_743859.1 Required for efficient pilin antigenic variation NP_743860.1 similar to GP:8347220, and GP:8347220; identified by sequence similarity NP_743862.1 similar to GB:M94539, SP:Q01064, PID:179891, GB:M95623, GB:X04217, GB:X04808, GB:D10608, GB:D12722, SP:P08397, PID:292385, PID:292386, PID:35305, PID:35307, and PID:35309; identified by sequence similarity NP_743863.1 similar to GB:M94539, SP:Q01064, PID:179891, GB:L20469, GB:L35902, GB:L35903, GB:U25441, GB:U32499, SP:P35462, PID:579579, PID:806903, and PID:927342; identified by sequence similarity NP_743864.1 similar to GP:6453875; identified by sequence similarity NP_743865.1 similar to GP:6469272; identified by sequence similarity NP_743866.1 identified by match to PFAM protein family HMM PF01557 NP_743867.1 similar to GB:Z11584, GB:Z11583, GB:Z14227, GB:Z14229, GB:Z14228, GB:Z11584, GB:Z11583, GB:Z14227, GB:Z14229, and GB:Z14228; identified by sequence similarity NP_743868.1 identified by match to PFAM protein family HMM PF00165 NP_743870.1 similar to GP:10442737, and GP:10442737; identified by sequence similarity NP_743871.1 similar to SP:P39311; identified by sequence similarity NP_743873.1 identified by match to PFAM protein family HMM PF01381 NP_743875.1 identified by match to PFAM protein family HMM PF00563 NP_743876.1 similar to GB:M26061, SP:P16499, and PID:2366987; identified by sequence similarity NP_743877.1 identified by match to TIGR protein family HMM TIGR01751 NP_743878.1 identified by match to TIGR protein family HMM TIGR01488 NP_743879.1 identified by match to TIGR protein family HMM TIGR00968 NP_743880.1 identified by match to TIGR protein family HMM TIGR01726 NP_743881.1 identified by match to TIGR protein family HMM TIGR01726 NP_743883.1 identified by match to TIGR protein family HMM TIGR00971 NP_743884.1 identified by match to PFAM protein family HMM PF00392 NP_743885.1 similar to GP:9951419; identified by sequence similarity NP_743887.1 catalyzes the removal of amino acids from the N termini of peptides NP_743888.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell NP_743889.1 similar to SP:P18197; identified by sequence similarity NP_743890.1 blocks the formation of polar Z-ring septums NP_743891.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA NP_743892.1 similar to GP:9949364; identified by sequence similarity NP_743894.1 similar to GP:9949360; identified by sequence similarity NP_743896.1 similar to GB:X78533, PID:468815, GB:X78533, and PID:468815; identified by sequence similarity NP_743897.1 identified by match to PFAM protein family HMM PF04069 NP_743898.1 similar to GP:9949357; identified by sequence similarity NP_743899.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake NP_743901.1 identified by match to TIGR protein family HMM TIGR01500 NP_743902.1 similar to GB:J03071, GB:A00501, GB:V00519, GB:M13438, GB:V00520, GB:J00148, GB:A12770, GB:A15072, GB:M14398, SP:P01241, SP:P01243, PID:183147, PID:183159, PID:490144, and PID:512406; identified by sequence similarity NP_743903.1 similar to GP:9949606; identified by sequence similarity NP_743905.1 identified by match to TIGR protein family HMM TIGR01575 NP_743906.1 similar to GP:9949601, GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, and PID:507429; identified by sequence similarity NP_743907.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules NP_743908.1 similar to GP:9949597; identified by sequence similarity NP_743909.1 similar to GB:L04572, SP:P28689, GB:L05381, PID:145787, PID:146393, GB:U00096, PID:1736484, and PID:1788147; identified by sequence similarity NP_743910.1 similar to GP:15021212; identified by sequence similarity NP_743911.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle NP_743912.1 similar to GP:5139534, and GP:5139534; identified by sequence similarity NP_743913.1 similar to GP:5139535, and SP:P15298; identified by sequence similarity NP_743914.1 identified by match to PFAM protein family HMM PF00581 NP_743915.1 similar to GP:9946756; identified by sequence similarity NP_743916.1 identified by match to PFAM protein family HMM PF04229 NP_743917.1 identified by match to PFAM protein family HMM PF00563 NP_743919.1 identified by match to TIGR protein family HMM TIGR01500 NP_743920.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate NP_743921.1 Involved in ubiquinone biosynthesis NP_743922.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway NP_743923.1 negatively supercoils closed circular double-stranded DNA NP_743924.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine NP_743925.1 identified by match to PFAM protein family HMM PF01817 NP_743926.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate and catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis NP_743927.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP NP_743928.2 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins NP_743929.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control NP_743931.1 similar to GP:3724326; identified by sequence similarity NP_743932.1 identified by match to PFAM protein family HMM PF01050 NP_743933.1 similar to GB:V00510, GB:J00123, GB:V00509, SP:P01210, PID:182099, and PID:31151; identified by sequence similarity NP_743934.1 similar to GB:M33819; identified by sequence similarity NP_743935.1 similar to GP:3142212, and GB:X53695; identified by sequence similarity NP_743936.1 similar to GP:7209347; identified by sequence similarity NP_743937.1 similar to GP:6759588, GB:J05252, SP:P16519, PID:189131, and PID:189652; identified by sequence similarity NP_743938.1 similar to GP:3832508; identified by sequence similarity NP_743939.1 similar to GB:D90276, and PID:219539; identified by sequence similarity NP_743940.1 identified by match to TIGR protein family HMM TIGR01746 NP_743941.1 identified by match to TIGR protein family HMM TIGR01746 NP_743942.1 identified by match to PFAM protein family HMM PF03693 NP_743945.1 identified by match to TIGR protein family HMM TIGR01454 NP_743946.1 identified by match to PFAM protein family HMM PF02348 NP_743947.1 similar to GB:U09063, and PID:483868; identified by sequence similarity NP_743948.1 identified by match to PFAM protein family HMM PF03490 NP_743949.1 identified by match to TIGR protein family HMM TIGR01556 NP_743950.1 identified by match to PFAM protein family HMM PF00427 NP_743952.1 similar to GP:4009448; identified by sequence similarity NP_743953.1 identified by match to PFAM protein family HMM PF02321 NP_743954.1 similar to GP:14090400; identified by sequence similarity NP_743955.1 identified by match to TIGR protein family HMM TIGR01746 NP_743956.1 similar to GP:6137218; identified by sequence similarity NP_743957.1 identified by match to PFAM protein family HMM PF00534 NP_743958.1 similar to GP:6690124, and GP:6690124; identified by sequence similarity NP_743959.1 similar to GP:10119921; identified by sequence similarity NP_743960.1 similar to GP:9949255, and GP:6690122; identified by sequence similarity NP_743961.1 similar to GB:M80254, SP:P30405, and PID:181274; identified by sequence similarity NP_743962.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis NP_743963.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family NP_743966.1 similar to SP:P27828; identified by sequence similarity NP_743968.1 identified by match to TIGR protein family HMM TIGR01259 NP_743969.1 similar to GP:9948973, and GP:9948973; identified by sequence similarity NP_743970.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase NP_743971.1 identified by match to TIGR protein family HMM TIGR01751 NP_743972.1 identified by match to TIGR protein family HMM TIGR01500 NP_743974.1 identified by match to PFAM protein family HMM PF00672 NP_743975.1 identified by match to TIGR protein family HMM TIGR00843 NP_743976.1 identified by match to PFAM protein family HMM PF00043 NP_743977.1 identified by match to PFAM protein family HMM PF02798 NP_743978.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer NP_743979.1 identified by match to PFAM protein family HMM PF01713 NP_743980.1 similar to GP:9947648, and GP:9947648; identified by sequence similarity NP_743981.1 similar to GP:8250600; identified by sequence similarity NP_743982.1 involved in methylation of ribosomal protein L3 NP_743984.1 identified by match to PFAM protein family HMM PF00561 NP_743985.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis NP_743986.1 similar to GP:9947654; identified by sequence similarity NP_743987.1 identified by match to PFAM protein family HMM PF03079 NP_743988.1 similar to GP:9948826, and GP:9948826; identified by sequence similarity NP_743989.1 identified by match to PFAM protein family HMM PF00023 NP_743991.1 similar to GB:J04809, SP:P00568, and PID:178322; identified by sequence similarity NP_743993.1 identified by match to PFAM protein family HMM PF04185 NP_743995.1 similar to GP:9947704; identified by sequence similarity NP_743996.1 identified by match to PFAM protein family HMM PF00034 NP_743997.1 identified by match to TIGR protein family HMM TIGR00888 NP_743998.1 identified by match to TIGR protein family HMM TIGR00383 NP_743999.1 similar to GB:J04982, GB:J03593, GB:J02966, SP:P05141, SP:P12235, PID:178659, PID:339725, PID:339920, GB:J04982, GB:J03593, GB:J02966, SP:P05141, SP:P12235, PID:178659, PID:339725, and PID:339920; identified by sequence similarity NP_744000.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA NP_744001.1 similar to GB:L01112, SP:P45375, PID:145016, and PID:1247706; identified by sequence similarity NP_744002.1 similar to GB:U10528, PID:505694, and SP:P50185; identified by sequence similarity NP_744005.1 similar to SP:P31127, GB:U00096, and PID:1787815; identified by sequence similarity NP_744007.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_744008.1 identified by match to PFAM protein family HMM PF03466 NP_744009.1 identified by match to TIGR protein family HMM TIGR01462 NP_744013.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA NP_744014.1 similar to SP:O68390; identified by sequence similarity NP_744015.1 similar to GP:9948936; identified by sequence similarity NP_744016.1 identified by match to PFAM protein family HMM PF03466 NP_744017.1 identified by match to PFAM protein family HMM PF01925 NP_744018.1 similar to GP:9948933; identified by sequence similarity NP_744019.1 similar to GP:9948932; identified by sequence similarity NP_744020.1 identified by match to PFAM protein family HMM PF01609 NP_744021.1 identified by match to PFAM protein family HMM PF01474 NP_744022.1 similar to GP:9948929; identified by sequence similarity NP_744023.1 identified by match to PFAM protein family HMM PF00271 NP_744024.1 identified by match to PFAM protein family HMM PF02900 NP_744025.1 catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide NP_744026.1 metalloprotease NP_744027.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor NP_744028.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress NP_744029.1 similar to GB:M94582, GB:M99412, GB:U11869, GB:U11874, GB:U11872, GB:U11873, GB:U11875, GB:U11876, GB:U11877, GB:U11878, GB:M73969, GB:U11866, GB:U11867, GB:U11868, GB:L19593, SP:P25025, PID:1109691, PID:186378, PID:511803, PID:559054, and PID:576679; identified by sequence similarity NP_744030.1 identified by match to PFAM protein family HMM PF02518 NP_744031.1 similar to GP:9948908, and GP:9948908; identified by sequence similarity NP_744032.1 identified by match to PFAM protein family HMM PF01590 NP_744033.1 similar to GP:9948905; identified by sequence similarity NP_744035.1 identified by match to PFAM protein family HMM PF03797 NP_744037.1 similar to GP:4928251, GB:D00726, SP:P22830, and PID:219656; identified by sequence similarity NP_744042.1 identified by match to TIGR protein family HMM TIGR01643 NP_744043.1 similar to SP:P42185; identified by sequence similarity NP_744044.1 identified by match to PFAM protein family HMM PF00577 NP_744045.1 identified by match to PFAM protein family HMM PF02753 NP_744046.1 identified by match to PFAM protein family HMM PF00419 NP_744048.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA NP_744049.1 identified by match to PFAM protein family HMM PF02798 NP_744050.1 identified by match to PFAM protein family HMM PF00005 NP_744051.1 identified by match to PFAM protein family HMM PF04306 NP_744052.1 identified by match to PFAM protein family HMM PF03772 NP_744053.1 identified by match to PFAM protein family HMM PF01618 NP_744054.1 similar to GP:5531414; identified by sequence similarity NP_744055.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate NP_744056.1 similar to GP:9949079; identified by sequence similarity NP_744057.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS NP_744058.1 identified by match to PFAM protein family HMM PF01451 NP_744059.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis NP_744060.1 similar to SP:P21513; identified by sequence similarity NP_744061.1 similar to GP:9949073; identified by sequence similarity NP_744062.1 identified by match to PFAM protein family HMM PF01343 NP_744063.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell NP_744064.1 similar to GP:9949070, and GP:9949070; identified by sequence similarity NP_744065.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not NP_744066.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY NP_744067.1 similar to SP:P25715; identified by sequence similarity NP_744068.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_744069.1 carries the fatty acid chain in fatty acid biosynthesis NP_744070.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP NP_744071.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate NP_744072.1 identified by match to TIGR protein family HMM TIGR00247 NP_744077.1 similar to GP:4526680; identified by sequence similarity NP_744078.1 similar to GP:6900907; identified by sequence similarity NP_744079.1 identified by match to PFAM protein family HMM PF00782 NP_744080.1 similar to GP:11691636; identified by sequence similarity NP_744081.1 similar to GP:3095052, GB:D10483, SP:P07652, PID:145848, PID:216510, PID:40864, and GB:U00096; identified by sequence similarity NP_744082.1 similar to SP:P52146; identified by sequence similarity NP_744083.1 similar to GB:L01087, SP:Q04759, PID:558099, and PID:558100; identified by sequence similarity NP_744084.1 similar to GP:9947311; identified by sequence similarity NP_744086.1 similar to GB:M73251, SP:P05518, SP:P10327, GB:X07518, GB:X13620, PID:142750, PID:40294, PID:40356, PID:490199, PID:1234884, PID:1234886, PID:1234888, PID:1247717, and PID:2298884; identified by sequence similarity NP_744088.1 similar to GP:10432486; identified by sequence similarity NP_744090.1 identified by match to PFAM protein family HMM PF00271 NP_744092.1 identified by match to PFAM protein family HMM PF04166 NP_744093.1 identified by match to PFAM protein family HMM PF00440 NP_744094.1 identified by match to PFAM protein family HMM PF03466 NP_744095.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine NP_744096.1 similar to GP:6650622; identified by sequence similarity NP_744097.1 similar to SP:P24186; identified by sequence similarity NP_744098.1 similar to GP:6580779; identified by sequence similarity NP_744099.1 similar to GB:L18881, GB:Z35446, GB:Z35447, GB:Z35448, GB:Z35450, GB:Z35454, SP:P48633, PID:408802, PID:516461, PID:516463, PID:516465, PID:516467, PID:516469, GB:L18881, GB:Z35446, GB:Z35447, GB:Z35448, GB:Z35450, GB:Z35454, SP:P48633, PID:408802, PID:516461, PID:516463, PID:516465, PID:516467, and PID:516469; identified by sequence similarity NP_744100.1 similar to GP:5578709; identified by sequence similarity NP_744101.1 similar to GP:5531409; identified by sequence similarity NP_744102.1 similar to GP:2588989; identified by sequence similarity NP_744103.1 similar to GB:U03057, SP:Q16658, PID:458028, and PID:497269; identified by sequence similarity NP_744104.1 similar to GP:5708244, and GP:7328280; identified by sequence similarity NP_744105.1 similar to GB:J03077, GB:J03015, GB:M86181, GB:M60255, GB:M60258, GB:X57107, GB:D00422, GB:M81355, GB:X57108, PID:1565257, PID:183231, PID:220064, PID:30235, PID:337756, PID:337760, PID:337762, PID:337765, and PID:337767; identified by sequence similarity NP_744106.1 similar to GP:3334787, and GP:3334787; identified by sequence similarity NP_744107.1 similar to GP:3746884; identified by sequence similarity NP_744109.1 similar to GP:8346965, and SP:Q52186; identified by sequence similarity NP_744113.1 identified by match to TIGR protein family HMM TIGR01199 NP_744114.1 identified by match to PFAM protein family HMM PF00589 NP_744116.1 similar to GP:1942708, SP:P37029, and PID:580773; identified by sequence similarity NP_744117.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA NP_744118.1 identified by match to PFAM protein family HMM PF01026 NP_744119.1 identified by match to PFAM protein family HMM PF00440 NP_744120.1 similar to GB:X64364, GB:L10240, GB:D45131, SP:P35613, PID:1209374, PID:1220307, PID:34449, PID:409357, and PID:633069; identified by sequence similarity NP_744123.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate NP_744125.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion NP_744126.1 identified by match to TIGR protein family HMM TIGR00880 NP_744127.1 identified by match to TIGR protein family HMM TIGR01730 NP_744128.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation NP_744129.1 identified by match to PFAM protein family HMM PF00440 NP_744130.1 identified by match to TIGR protein family HMM TIGR01738 NP_744131.1 identified by match to PFAM protein family HMM PF03061 NP_744132.1 similar to GP:9949242, GB:L13203, SP:Q12951, PID:1911185, and PID:563168; identified by sequence similarity NP_744133.1 similar to GP:9949238; identified by sequence similarity NP_744134.1 identified by match to TIGR protein family HMM TIGR00229 NP_744135.1 identified by match to PFAM protein family HMM PF03466 NP_744136.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate NP_744137.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D NP_744138.1 identified by match to PFAM protein family HMM PF02390 NP_744139.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis NP_744140.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde NP_744141.1 identified by match to PFAM protein family HMM PF01609 NP_744143.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde NP_744144.1 similar to GP:9949226, and GP:3237312; identified by sequence similarity NP_744145.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis NP_744146.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits NP_744147.1 similar to GB:X60957, GB:A16753, SP:P35590, PID:396815, PID:512414, and PID:512416; identified by sequence similarity NP_744149.1 similar to GB:M93311, GB:X89604, GB:S72043, SP:P02795, SP:P04731, SP:P04732, SP:P04733, SP:P07438, SP:P13640, SP:P25713, SP:P80295, SP:P80296, SP:P80297, PID:187547, PID:517351, and PID:914851; identified by sequence similarity NP_744150.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway NP_744151.1 catalyzes the conversion of O-succinylhomoserine into homocysteine NP_744152.1 similar to GB:M36718, GB:X81030, GB:M22596, GB:X13809, SP:P09086, PID:189363, PID:189367, PID:189413, PID:35129, PID:35132, PID:35165, and PID:727160; identified by sequence similarity NP_744153.1 similar to GP:8885520, and GP:8885520; identified by sequence similarity NP_744154.1 identified by match to PFAM protein family HMM PF00165 NP_744155.1 similar to GP:9949202; identified by sequence similarity NP_744157.1 similar to GB:D14445, SP:Q07411, and PID:286035; identified by sequence similarity NP_744158.1 similar to SP:P42593; identified by sequence similarity NP_744159.1 identified by match to TIGR protein family HMM TIGR01274 NP_744160.1 similar to SP:P08732; identified by sequence similarity NP_744162.1 catalyzes the phosphorylation of NAD to NADP NP_744163.1 identified by match to PFAM protein family HMM PF00149 NP_744164.1 similar to GP:9949195; identified by sequence similarity NP_744166.1 similar to GP:9949192; identified by sequence similarity NP_744167.1 similar to SP:P04825; identified by sequence similarity NP_744168.1 identified by match to PFAM protein family HMM PF02012 NP_744169.1 similar to GP:9949187, and GP:9949187; identified by sequence similarity NP_744171.1 similar to GP:9950416; identified by sequence similarity NP_744173.1 similar to GP:11177841; identified by sequence similarity NP_744174.1 similar to GB:X03833, GB:X02851, GB:M15329, GB:X56086, SP:P01583, PID:186278, PID:186280, PID:33786, PID:33795, PID:35661, and PID:755744; identified by sequence similarity NP_744175.1 similar to GB:L11329, GB:U23853, SP:Q05923, PID:292376, and PID:775212; identified by sequence similarity NP_744177.1 similar to GP:9949182; identified by sequence similarity NP_744178.1 identified by match to PFAM protein family HMM PF00515 NP_744179.1 identified by match to PFAM protein family HMM PF00092 NP_744181.1 identified by match to PFAM protein family HMM PF01882 NP_744182.1 identified by match to PFAM protein family HMM PF00004 NP_744184.1 identified by match to PFAM protein family HMM PF03631 NP_744185.1 similar to GP:7542441; identified by sequence similarity NP_744186.1 identified by match to TIGR protein family HMM TIGR00674 NP_744187.1 identified by match to TIGR protein family HMM TIGR01086 NP_744188.1 similar to GP:5881868; identified by sequence similarity NP_744189.1 similar to GP:5881869; identified by sequence similarity NP_744190.1 similar to GP:5881870; identified by sequence similarity NP_744191.1 similar to GP:3152946; identified by sequence similarity NP_744192.1 similar to GP:9950108; identified by sequence similarity NP_744193.1 similar to GP:9946236; identified by sequence similarity NP_744194.1 similar to GP:5441761, and GP:5441761; identified by sequence similarity NP_744195.1 identified by match to PFAM protein family HMM PF00753 NP_744196.1 identified by match to PFAM protein family HMM PF03466 NP_744197.1 identified by match to PFAM protein family HMM PF00725 NP_744198.1 similar to GP:9951491; identified by sequence similarity NP_744199.1 identified by match to PFAM protein family HMM PF03473 NP_744200.1 identified by match to PFAM protein family HMM PF03061 NP_744201.1 similar to GB:M34254, SP:P00313, PID:149775, GB:M34254, SP:P00313, and PID:149775; identified by sequence similarity NP_744202.1 identified by match to TIGR protein family HMM TIGR01509 NP_744204.1 similar to GB:X60036, GB:X77337, and SP:Q00325; identified by sequence similarity NP_744205.1 similar to SP:P38487, PID:500611, PID:840668, SP:P38487, PID:500611, and PID:840668; identified by sequence similarity NP_744206.1 similar to GB:J04543, SP:P20073, and PID:338244; identified by sequence similarity NP_744207.1 identified by match to PFAM protein family HMM PF03600 NP_744208.1 identified by match to PFAM protein family HMM PF03573 NP_744209.1 similar to GB:M60264, PID:144091, GB:M60264, and PID:144091; identified by sequence similarity NP_744210.1 similar to SP:P09888, PID:780269, SP:P09888, and PID:780269; identified by sequence similarity NP_744212.1 similar to GP:1070029, and GP:2950328; identified by sequence similarity NP_744214.1 similar to GB:U12892, and PID:530857; identified by sequence similarity NP_744215.1 identified by match to PFAM protein family HMM PF03970 NP_744216.1 similar to GP:10173529; identified by sequence similarity NP_744217.1 identified by match to PFAM protein family HMM PF04226 NP_744218.1 identified by match to TIGR protein family HMM TIGR01730 NP_744219.1 identified by match to PFAM protein family HMM PF02321 NP_744220.1 identified by match to PFAM protein family HMM PF00165 NP_744222.1 identified by match to PFAM protein family HMM PF00165 NP_744223.1 similar to GP:9947377; identified by sequence similarity NP_744224.1 similar to GP:3646369; identified by sequence similarity NP_744227.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding NP_744228.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase NP_744230.1 similar to GP:9949175, and GP:9949175; identified by sequence similarity NP_744231.1 similar to GP:9947748; identified by sequence similarity NP_744232.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_744233.1 similar to GP:5668607; identified by sequence similarity NP_744234.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity NP_744235.1 similar to GP:5668609, and GP:5668609; identified by sequence similarity NP_744236.1 similar to GP:5668603, and GP:5668603; identified by sequence similarity NP_744237.1 similar to GP:5668604, and GP:5668604; identified by sequence similarity NP_744238.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas fluorescens and P. aeruginosa regulates outer membrane protein OprF expression NP_744239.1 similar to GP:4580972, and GP:4580972; identified by sequence similarity NP_744240.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 NP_744241.1 similar to GP:9947763; identified by sequence similarity NP_744242.1 similar to GB:M19364, SP:P07316, PID:181099, and PID:181118; identified by sequence similarity NP_744243.1 similar to GB:U05040, and PID:460152; identified by sequence similarity NP_744244.1 similar to GB:U05040, and PID:460152; identified by sequence similarity NP_744245.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors NP_744246.2 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA NP_744247.1 identified by match to PFAM protein family HMM PF03580 NP_744248.1 identified by match to PFAM protein family HMM PF02113 NP_744249.1 similar to GP:9949151, and GP:9949151; identified by sequence similarity NP_744250.1 similar to GB:L07555, GB:Z30426, GB:Z30430, GB:Z30427, GB:Z30429, GB:Z30428, SP:Q07108, PID:291898, PID:397939, and PID:558352; identified by sequence similarity NP_744251.1 similar to GB:M28825, GB:M22080, GB:M22163, GB:M22164, GB:M22165, GB:M22166, GB:M22167, GB:X79309, GB:X79308, GB:M27735, GB:M14663, SP:P06126, PID:180046, and PID:530884; identified by sequence similarity NP_744252.1 dGTPase type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate NP_744253.1 similar to GP:9949147, and GP:9949147; identified by sequence similarity NP_744256.1 identified by match to PFAM protein family HMM PF00909 NP_744257.1 similar to GP:9949137; identified by sequence similarity NP_744258.1 similar to GP:7801292; identified by sequence similarity NP_744259.1 similar to GP:9946825; identified by sequence similarity NP_744260.1 similar to GP:9947522, GB:K01316, SP:P01857, SP:P01859, SP:P01860, SP:P01861, PID:184759, PID:185291, PID:2414492, PID:2414494, PID:567112, PID:577056, and PID:683576; identified by sequence similarity NP_744261.1 catalyzes the conversion of citrate to isocitrate NP_744262.1 similar to GP:9947524; identified by sequence similarity NP_744263.1 identified by match to PFAM protein family HMM PF01609 NP_744265.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs NP_744266.1 Required for the de novo synthesis of pyroxidine via the pdxA branch; catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate NP_744267.1 similar to GP:9947533; identified by sequence similarity NP_744268.1 identified by match to PFAM protein family HMM PF03631 NP_744269.1 identified by match to PFAM protein family HMM PF00672 NP_744271.1 similar to SP:P30746; identified by sequence similarity NP_744272.1 similar to GB:X02751, GB:L00043, GB:X53291, GB:X53292, GB:X05564, GB:X05565, GB:L00040, GB:L00041, GB:L00042, GB:M10055, GB:K03211, GB:M25898, GB:S68580, GB:X07440, GB:X61282, GB:X00645, SP:P01111, SP:P01112, PID:1335234, PID:1335235, PID:1335236, PID:1335287, PID:190927, PID:190938, PID:35092, PID:35103, PID:465130, PID:553520, PID:553633, PID:553635, PID:553638, PID:825697, and PID:929658; identified by sequence similarity NP_744273.1 identified by match to PFAM protein family HMM PF00534 NP_744274.2 cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role NP_744275.1 similar to GP:4007711, GB:L22647, SP:P34995, and PID:410209; identified by sequence similarity NP_744276.1 identified by match to PFAM protein family HMM PF02518 NP_744277.1 identified by match to PFAM protein family HMM PF00072 NP_744278.1 identified by match to PFAM protein family HMM PF03473 NP_744279.1 similar to SP:P03810; identified by sequence similarity NP_744280.1 similar to GB:L02321, SP:P46439, and PID:468260; identified by sequence similarity NP_744281.1 identified by match to PFAM protein family HMM PF00582 NP_744283.1 similar to GP:7741879; identified by sequence similarity NP_744285.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids NP_744286.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids NP_744287.1 similar to GP:9949114; identified by sequence similarity NP_744288.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity NP_744291.1 similar to GB:S45627, GB:S45629, GB:S45636, GB:S45637, GB:S45639, GB:S45640, GB:S45635, GB:M16594, GB:X65726, GB:X65727, GB:X65728, GB:X65729, GB:X65730, GB:X65731, GB:X65732, SP:P08263, SP:P09210, PID:306811, PID:825605, and PID:825606; identified by sequence similarity NP_744292.1 Represses a number of genes involved in the response to DNA damage NP_744293.1 identified by match to PFAM protein family HMM PF00440 NP_744294.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides NP_744295.1 identified by match to PFAM protein family HMM PF00271 NP_744297.1 identified by match to TIGR protein family HMM TIGR00643 NP_744298.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent NP_744299.1 similar to SP:P41780; identified by sequence similarity NP_744300.1 catalyzes the conversion of NADPH to NADH NP_744301.1 identified by match to PFAM protein family HMM PF03009 NP_744302.1 similar to GP:9949089, and GP:9949089; identified by sequence similarity NP_744303.1 similar to SP:P31733, and PID:38828; identified by sequence similarity NP_744304.1 similar to SP:P75957; identified by sequence similarity NP_744305.1 similar to SP:P31733, and PID:38828; identified by sequence similarity NP_744306.1 identified by match to TIGR protein family HMM TIGR01386 NP_744307.1 identified by match to TIGR protein family HMM TIGR01387 NP_744308.1 identified by match to PFAM protein family HMM PF00127 NP_744309.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis NP_744310.1 similar to GP:9948888; identified by sequence similarity NP_744311.1 similar to GP:9948886; identified by sequence similarity NP_744313.1 similar to GP:9948882; identified by sequence similarity NP_744314.1 identified by match to PFAM protein family HMM PF00072 NP_744315.1 identified by match to PFAM protein family HMM PF01740 NP_744317.1 Maintains the balance of metabolites in the pentose-phosphate pathway NP_744318.1 identified by match to PFAM protein family HMM PF01207 NP_744319.1 identified by match to PFAM protein family HMM PF01817 NP_744320.1 similar to GP:10176119; identified by sequence similarity NP_744322.1 similar to GB:J00230, SP:P01857, SP:P01859, SP:P01860, SP:P01861, PID:1335110, PID:1335112, PID:1335113, PID:184758, PID:567112, and PID:577056; identified by sequence similarity NP_744323.1 similar to GP:9950386, and GP:9950386; identified by sequence similarity NP_744324.1 similar to GB:L22081, SP:P37032, and PID:348945; identified by sequence similarity NP_744325.1 similar to GB:L17326, and PID:306325; identified by sequence similarity NP_744326.1 identified by match to PFAM protein family HMM PF01381 NP_744327.1 similar to SP:P28787, GB:X68129, and PID:45902; identified by sequence similarity NP_744328.1 similar to SP:P76038; identified by sequence similarity NP_744329.1 similar to GP:13194611; identified by sequence similarity NP_744330.1 identified by match to PFAM protein family HMM PF01381 NP_744331.1 similar to GP:9948644; identified by sequence similarity NP_744332.1 catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor NP_744333.1 similar to GP:3724144, and GP:3724144; identified by sequence similarity NP_744334.1 similar to GP:17743211; identified by sequence similarity NP_744335.1 similar to GP:3724147, and GP:3724147; identified by sequence similarity NP_744336.1 similar to SP:P03807; identified by sequence similarity NP_744337.1 similar to GB:M22404, PID:188866, GB:M22404, and PID:188866; identified by sequence similarity NP_744338.1 similar to GP:9947261; identified by sequence similarity NP_744339.1 similar to GP:9947967, and GP:9947967; identified by sequence similarity NP_744342.1 similar to GB:K00558, GB:S62639, SP:P04687, SP:P05215, PID:340019, PID:340021, and PID:37492; identified by sequence similarity NP_744343.1 identified by match to PFAM protein family HMM PF03466 NP_744344.1 identified by match to PFAM protein family HMM PF01547 NP_744345.2 catalyzes the formation of putrescine from agmatine NP_744348.1 identified by match to PFAM protein family HMM PF03969 NP_744349.1 similar to GB:M24428, GB:M24429, GB:M24430, GB:M24431, GB:M24432, GB:M24433, GB:M24434, GB:M24435, GB:M24436, GB:M24437, GB:M24438, GB:M24439, GB:X14174, GB:S76738, SP:P05186, PID:178462, PID:28738, GB:M24428, GB:M24429, GB:M24430, GB:M24431, GB:M24432, GB:M24433, GB:M24434, GB:M24435, GB:M24436, GB:M24437, GB:M24438, GB:M24439, GB:X14174, GB:S76738, SP:P05186, PID:178462, and PID:28738; identified by sequence similarity NP_744350.1 identified by match to TIGR protein family HMM TIGR01738 NP_744351.1 similar to GP:9948831; identified by sequence similarity NP_744352.1 similar to GP:9950973, and GP:9950973; identified by sequence similarity NP_744354.1 similar to GB:X12901, GB:A07400, GB:X04657, GB:A14103, SP:P09327, PID:1247443, PID:37843, PID:37845, PID:412172, and PID:579563; identified by sequence similarity NP_744355.1 identified by match to PFAM protein family HMM PF01136 NP_744356.1 identified by match to PFAM protein family HMM PF01594 NP_744357.1 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate NP_744358.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate NP_744359.1 identified by match to PFAM protein family HMM PF03466 NP_744360.1 identified by match to PFAM protein family HMM PF00165 NP_744361.1 identified by match to PFAM protein family HMM PF00560 NP_744362.1 similar to GP:13310126; identified by sequence similarity NP_744363.1 similar to GP:9948613, and GP:13310127; identified by sequence similarity NP_744364.1 similar to GP:13310128; identified by sequence similarity NP_744365.1 identified by match to PFAM protein family HMM PF02770 NP_744366.1 similar to SP:Q52995, and GP:13310130; identified by sequence similarity NP_744367.1 identified by match to PFAM protein family HMM PF01609 NP_744369.1 identified by match to PFAM protein family HMM PF01258 NP_744373.1 similar to GP:9947967, and GP:9947967; identified by sequence similarity NP_744374.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport NP_744375.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport NP_744376.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport NP_744377.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone NP_744378.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali NP_744379.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+ NP_744380.1 identified by match to PFAM protein family HMM PF00892 NP_744381.1 similar to GP:9947301; identified by sequence similarity NP_744382.1 similar to SP:P00778; identified by sequence similarity NP_744383.1 similar to GP:10178384; identified by sequence similarity NP_744384.1 identified by match to PFAM protein family HMM PF03992 NP_744385.1 identified by match to PFAM protein family HMM PF00326 NP_744386.1 identified by match to PFAM protein family HMM PF01366 NP_744387.1 identified by match to TIGR protein family HMM TIGR00500 NP_744388.1 similar to GB:L07597, and PID:292457; identified by sequence similarity NP_744389.1 similar to GB:Z25430, and PID:405739; identified by sequence similarity NP_744390.1 similar to GP:3758825; identified by sequence similarity NP_744391.1 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space NP_744392.1 similar to GP:3581840, and GP:3581840; identified by sequence similarity NP_744393.1 similar to SP:P35852, PID:308866, SP:P35852, and PID:308866; identified by sequence similarity NP_744394.1 identified by match to PFAM protein family HMM PF01381 NP_744395.1 similar to GP:9950041; identified by sequence similarity NP_744396.1 identified by match to TIGR protein family HMM TIGR00004 NP_744397.1 identified by match to TIGR protein family HMM TIGR00814 NP_744398.1 identified by match to PFAM protein family HMM PF02743 NP_744399.1 identified by match to PFAM protein family HMM PF03466 NP_744400.1 similar to GP:9948836; identified by sequence similarity NP_744401.1 identified by match to PFAM protein family HMM PF00463 NP_744402.1 identified by match to PFAM protein family HMM PF00392 NP_744403.1 identified by match to TIGR protein family HMM TIGR01199 NP_744404.1 involved in the transport of C4-dicarboxylates across the membrane NP_744405.1 identified by match to PFAM protein family HMM PF01381 NP_744406.1 similar to GP:4545127, and GP:4545127; identified by sequence similarity NP_744407.1 similar to GP:4545126; identified by sequence similarity NP_744408.1 identified by match to PFAM protein family HMM PF02954 NP_744409.1 similar to GB:D12589, SP:P30296, and PID:217073; identified by sequence similarity NP_744410.1 identified by match to TIGR protein family HMM TIGR00968 NP_744411.1 similar to GB:X15162, SP:P00475, GB:V00272, GB:Z19601, and PID:1789789; identified by sequence similarity NP_744412.1 similar to GP:9963816; identified by sequence similarity NP_744413.1 similar to GP:2828820; identified by sequence similarity NP_744414.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate NP_744415.1 similar to GB:M98835, SP:Q03314, and PID:152428; identified by sequence similarity NP_744416.1 similar to GP:6598999, and GP:6598999; identified by sequence similarity NP_744417.1 similar to SP:P29015, GB:X69109, PID:42740, GB:U00096, PID:1549275, PID:1742736, PID:1742746, PID:1787952, SP:P29015, GB:X69109, PID:42740, GB:U00096, PID:1549275, PID:1742736, PID:1742746, and PID:1787952; identified by sequence similarity NP_744418.1 similar to GP:6599001; identified by sequence similarity NP_744419.1 similar to GP:6599004, and GP:6573521; identified by sequence similarity NP_744422.1 similar to SP:P14899, and PID:2693; identified by sequence similarity NP_744425.1 similar to GP:6599017, SP:Q01960, GB:X66445, PID:39919, and GB:AL009126; identified by sequence similarity NP_744428.1 similar to SP:P06194, GB:X02604, PID:43773, SP:Q01960, GB:X66445, PID:39919, and GB:AL009126; identified by sequence similarity NP_744430.1 similar to GP:6599024; identified by sequence similarity NP_744431.1 similar to SP:P24323, GB:X57315, PID:1573319, SP:P24323, GB:X57315, and PID:1573319; identified by sequence similarity NP_744432.1 similar to SP:P32042; identified by sequence similarity NP_744433.1 similar to SP:P32042; identified by sequence similarity NP_744435.1 similar to GP:6599032; identified by sequence similarity NP_744436.1 similar to GP:6599033; identified by sequence similarity NP_744437.1 similar to GP:6599034; identified by sequence similarity NP_744438.1 similar to GP:7523534, and GP:7523534; identified by sequence similarity NP_744442.1 similar to SP:P06524, GB:X02423, GB:X03933, GB:X16905, PID:154815, PID:39184, PID:39186, SP:P06524, GB:X02423, GB:X03933, GB:X16905, PID:154815, PID:39184, and PID:39186; identified by sequence similarity NP_744444.1 similar to GP:5834745, GB:M32103, SP:P16644, and PID:153035; identified by sequence similarity NP_744446.1 similar to GP:6166382; identified by sequence similarity NP_744447.1 similar to GP:7292196; identified by sequence similarity NP_744448.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer NP_744449.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_744450.1 binds and unfolds substrates as part of the ClpXP protease NP_744451.1 identified by match to PFAM protein family HMM PF00004 NP_744452.1 similar to SP:P05384; identified by sequence similarity NP_744453.1 similar to SP:P17161, GB:X03147, and PID:43926; identified by sequence similarity NP_744454.1 similar to GP:9947608; identified by sequence similarity NP_744457.1 identified by match to PFAM protein family HMM PF02551 NP_744458.1 similar to GP:9948957, and GP:9948957; identified by sequence similarity NP_744459.1 similar to GP:9948956; identified by sequence similarity NP_744460.1 similar to SP:P27859; identified by sequence similarity NP_744461.1 identified by match to PFAM protein family HMM PF00497 NP_744462.1 identified by match to PFAM protein family HMM PF04173 NP_744463.1 similar to GP:9948948; identified by sequence similarity NP_744464.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus NP_744465.1 similar to GP:9948946; identified by sequence similarity NP_744466.1 identified by match to PFAM protein family HMM PF00005 NP_744467.1 identified by match to PFAM protein family HMM PF00657 NP_744468.1 similar to GP:9948943; identified by sequence similarity NP_744469.1 identified by match to PFAM protein family HMM PF03734 NP_744471.1 similar to GP:3201890, and SP:P11221; identified by sequence similarity NP_744472.1 similar to GP:9947727; identified by sequence similarity NP_744473.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive NP_744474.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate NP_744475.1 identified by match to PFAM protein family HMM PF00582 NP_744476.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation NP_744477.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite NP_744478.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine NP_744480.1 identified by match to PFAM protein family HMM PF04093 NP_744481.1 similar to GP:9947747; identified by sequence similarity NP_744482.1 identified by match to PFAM protein family HMM PF00392 NP_744483.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate NP_744484.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity NP_744485.1 Catalyzes the conversion of citrate to isocitrate NP_744486.1 identified by match to PFAM protein family HMM PF04303 NP_744487.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C NP_744488.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate NP_744490.1 similar to GB:L04569, GB:M57971, GB:Z34811, GB:Z34812, GB:Z34821, GB:Z34822, GB:Z34809, GB:Z34810, GB:Z34813, GB:Z34814, GB:Z34815, GB:Z34816, GB:Z34817, GB:Z34818, GB:Z34819, GB:Z34820, GB:M57972, GB:M91370, GB:Z26294, GB:Z26295, PID:291895, PID:501073, PID:508183, PID:508185, PID:508187, PID:508189, PID:508191, PID:508193, PID:508195, PID:508197, PID:508199, PID:508201, PID:509048, PID:509068, PID:509168, PID:509178, PID:509341, and PID:509344; identified by sequence similarity NP_744496.1 identified by match to TIGR protein family HMM TIGR01387 NP_744497.1 identified by match to PFAM protein family HMM PF02518 NP_744498.1 similar to GB:L11527, and PID:388363; identified by sequence similarity NP_744499.1 identified by match to PFAM protein family HMM PF03466 NP_744500.1 similar to SP:P33905, PID:1163213, and PID:154813; identified by sequence similarity NP_744501.1 similar to GP:9950782; identified by sequence similarity NP_744503.1 similar to GP:5052340; identified by sequence similarity NP_744504.1 similar to SP:P33786, and PID:48912; identified by sequence similarity NP_744505.1 similar to GP:6521382, and SP:Q9R6X3; identified by sequence similarity NP_744506.1 similar to GP:13649957; identified by sequence similarity NP_744507.1 similar to GP:13649956; identified by sequence similarity NP_744508.1 similar to GP:13649956; identified by sequence similarity NP_744509.1 similar to GP:13649957; identified by sequence similarity NP_744510.1 identified by match to PFAM protein family HMM PF00345 NP_744511.1 similar to GB:L10333, GB:L10334, GB:L10335, and PID:307311; identified by sequence similarity NP_744512.1 similar to GP:8895715, and GP:13649960; identified by sequence similarity NP_744513.1 identified by match to PFAM protein family HMM PF00246 NP_744514.1 identified by match to PFAM protein family HMM PF00165 NP_744515.1 similar to GB:X64171, GB:L13470, GB:M31218, SP:P05543, PID:338697, PID:37142, PID:405514, GB:X64063, SP:P28765, and PID:1335662; identified by sequence similarity NP_744516.1 similar to SP:P25156, GB:X59507, and PID:395159; identified by sequence similarity NP_744517.1 catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid NP_744518.1 identified by match to PFAM protein family HMM PF00560 NP_744520.1 similar to GB:M22453, GB:J03912, GB:J05253, SP:P10745, PID:186541, PID:307074, PID:307075, PID:33961, and PID:386835; identified by sequence similarity NP_744521.1 similar to GB:D13638, and PID:285981; identified by sequence similarity NP_744524.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity NP_744525.1 similar to GP:5257182, and GP:5257182; identified by sequence similarity NP_744526.1 similar to GP:5257179, and GP:5257179; identified by sequence similarity NP_744527.1 similar to GB:M68840, GB:X60819, SP:P21397, PID:187351, PID:187353, and PID:187355; identified by sequence similarity NP_744528.1 similar to GP:3298363, SP:P04127, GB:X02921, SP:P02972, SP:P04740, GB:M68060, and GB:X03391; identified by sequence similarity NP_744529.1 similar to GB:D13178, SP:Q08751, PID:398125, GB:D13178, SP:Q08751, and PID:398125; identified by sequence similarity NP_744531.1 similar to GB:M11189, SP:P04190, SP:P14488, and PID:142604; identified by sequence similarity NP_744532.1 identified by match to PFAM protein family HMM PF00165 NP_744534.1 identified by match to PFAM protein family HMM PF03591 NP_744537.1 similar to GB:M60854, SP:P17008, and PID:338447; identified by sequence similarity NP_744538.1 similar to GB:L09706, GB:L09707, GB:L09708, GB:X04481, GB:M15549, SP:P06681, PID:187765, PID:2347131, PID:298124, PID:34628, PID:467309, and PID:553209; identified by sequence similarity NP_744539.1 identified by match to PFAM protein family HMM PF03466 NP_744540.1 identified by match to PFAM protein family HMM PF04284 NP_744541.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C NP_744542.1 identified by match to PFAM protein family HMM PF00560 NP_744543.1 identified by match to PFAM protein family HMM PF00560 NP_744545.1 identified by match to PFAM protein family HMM PF00036 NP_744548.1 identified by match to PFAM protein family HMM PF04173 NP_744550.1 identified by match to PFAM protein family HMM PF02518 NP_744551.1 identified by match to PFAM protein family HMM PF00072 NP_744553.1 similar to GP:10175285, GB:M76125, GB:S65125, GB:X57019, GB:X66029, GB:X66030, SP:P30530, PID:37593, and PID:37595; identified by sequence similarity NP_744554.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate NP_744555.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis NP_744556.1 similar to SP:P13509; identified by sequence similarity NP_744557.1 identified by match to TIGR protein family HMM TIGR01730 NP_744558.1 identified by match to PFAM protein family HMM PF04295 NP_744559.1 similar to GP:8250606; identified by sequence similarity NP_744560.1 identified by match to TIGR protein family HMM TIGR01007 NP_744561.1 identified by match to PFAM protein family HMM PF00990 NP_744563.1 identified by match to TIGR protein family HMM TIGR01575 NP_744564.1 similar to GP:8217385, GB:M18461, GB:S60788, PID:1552514, PID:339016, PID:575274, and PID:930052; identified by sequence similarity NP_744565.1 similar to GP:8546927; identified by sequence similarity NP_744566.1 similar to GP:11071205; identified by sequence similarity NP_744567.1 similar to GP:9951108; identified by sequence similarity NP_744568.1 similar to GB:M13295, GB:M13296, GB:M13297, GB:M13298, GB:M13299, SP:P03999, PID:180685, and PID:2138076; identified by sequence similarity NP_744569.1 similar to GB:X00264, SP:P01229, SP:P01233, and PID:2292893; identified by sequence similarity NP_744570.1 similar to GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, and PID:458555; identified by sequence similarity NP_744572.1 similar to GP:9948949, and SP:P37025; identified by sequence similarity NP_744573.1 identified by match to PFAM protein family HMM PF00165 NP_744574.1 identified by match to TIGR protein family HMM TIGR01751 NP_744575.1 identified by match to PFAM protein family HMM PF03760 NP_744576.1 similar to GP:5777418; identified by sequence similarity NP_744577.1 identified by match to PFAM protein family HMM PF04241 NP_744578.1 identified by match to PFAM protein family HMM PF00165 NP_744579.1 similar to GP:9949718; identified by sequence similarity NP_744580.1 catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive NP_744582.1 similar to GP:10719750, and GP:10719750; identified by sequence similarity NP_744583.1 similar to SP:P39171; identified by sequence similarity NP_744584.1 identified by match to PFAM protein family HMM PF03466 NP_744585.1 identified by match to PFAM protein family HMM PF00441 NP_744586.1 identified by match to PFAM protein family HMM PF03741 NP_744587.1 similar to GP:3298355, and SP:P26427; identified by sequence similarity NP_744588.1 similar to SP:O82864, GB:J02708, SP:P05705, PID:146278, GB:U00096, PID:1789054, and PID:1800088; identified by sequence similarity NP_744590.1 similar to GP:9949595; identified by sequence similarity NP_744591.1 involved in the import of serine and threonine coupled with the import of sodium NP_744592.1 identified by match to PFAM protein family HMM PF03466 NP_744593.1 similar to GB:X14975, GB:M14666, SP:P15812, PID:180052, PID:296640, PID:496891, and PID:496893; identified by sequence similarity NP_744594.1 identified by match to PFAM protein family HMM PF01654 NP_744595.1 similar to GP:9948859; identified by sequence similarity NP_744596.1 identified by match to PFAM protein family HMM PF01593 NP_744598.1 similar to GP:10280523, and GP:10280523; identified by sequence similarity NP_744599.1 similar to GP:9948828, GB:M28826, GB:M22168, GB:M22169, GB:M22170, GB:M22171, GB:M22172, GB:M22173, GB:M14665, SP:P29016, PID:180050, PID:180056, and PID:180064; identified by sequence similarity NP_744601.1 similar to GP:2392795, and SP:P10182; identified by sequence similarity NP_744602.1 similar to GB:M26061, SP:P16499, and PID:2366987; identified by sequence similarity NP_744603.1 similar to GB:L08239, and PID:950412; identified by sequence similarity NP_744604.1 identified by match to PFAM protein family HMM PF02653 NP_744605.1 identified by match to TIGR protein family HMM TIGR01481 NP_744606.1 similar to GB:M77016, SP:P28289, and PID:339948; identified by sequence similarity NP_744607.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source NP_744608.1 identified by match to PFAM protein family HMM PF01156 NP_744610.1 similar to GP:9947968, and GP:9947968; identified by sequence similarity NP_744611.1 similar to GB:M84993, SP:P26462, GB:X52093, PID:154021, SP:P31667, PID:606346, GB:U00096, and PID:1789816; identified by sequence similarity NP_744613.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) NP_744614.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits NP_744615.2 identified by match to PFAM protein family HMM PF01632 NP_744616.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit NP_744617.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily NP_744618.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily NP_744619.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control NP_744620.1 identified by match to PFAM protein family HMM PF00376 NP_744622.1 similar to GP:8037803, and GP:8037803; identified by sequence similarity NP_744623.1 identified by match to PFAM protein family HMM PF00440 NP_744624.1 identified by match to TIGR protein family HMM TIGR01751 NP_744625.1 similar to GB:U09367, SP:P52737, and PID:487785; identified by sequence similarity NP_744626.1 similar to GB:U09367, SP:P52737, and PID:487785; identified by sequence similarity NP_744627.1 similar to GP:6648631; identified by sequence similarity NP_744628.1 similar to SP:P33383, and SP:P33383; identified by sequence similarity NP_744629.1 identified by match to PFAM protein family HMM PF02619 NP_744630.1 similar to GB:X64364, GB:L10240, GB:D45131, SP:P35613, PID:1209374, PID:1220307, PID:34449, PID:409357, PID:633069, GB:X06614, GB:S57794, SP:P10276, PID:1335286, PID:35874, PID:36157, and PID:825712; identified by sequence similarity NP_744631.1 similar to GP:6273649; identified by sequence similarity NP_744632.1 identified by match to PFAM protein family HMM PF01022 NP_744633.1 identified by match to PFAM protein family HMM PF00296 NP_744634.1 identified by match to PFAM protein family HMM PF00724 NP_744635.1 identified by match to TIGR protein family HMM TIGR01722 NP_744636.1 similar to GB:L04309, SP:Q07567, and PID:310375; identified by sequence similarity NP_744637.1 similar to GP:6049281, and GP:6049281; identified by sequence similarity NP_744638.1 similar to GP:11061573; identified by sequence similarity NP_744639.1 similar to GP:5002553; identified by sequence similarity NP_744640.1 similar to GP:4378173; identified by sequence similarity NP_744641.1 identified by match to TIGR protein family HMM TIGR00608 NP_744643.1 similar to GP:5823649, and GP:5823649; identified by sequence similarity NP_744646.1 identified by match to TIGR protein family HMM TIGR01552 NP_744649.1 similar to PIR:A42465; identified by sequence similarity NP_744650.1 identified by match to PFAM protein family HMM PF03466 NP_744651.1 similar to GP:10175111; identified by sequence similarity NP_744652.1 identified by match to PFAM protein family HMM PF01361 NP_744653.1 identified by match to PFAM protein family HMM PF00990 NP_744655.1 identified by match to PFAM protein family HMM PF00106 NP_744657.1 similar to GP:9187583; identified by sequence similarity NP_744659.1 similar to GB:X15786, SP:P07949, PID:36009, GB:X15786, SP:P07949, and PID:36009; identified by sequence similarity NP_744660.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer NP_744661.1 similar to GP:7573255, SP:P38487, PID:500611, and PID:840668; identified by sequence similarity NP_744662.1 similar to GP:7573254; identified by sequence similarity NP_744663.1 similar to GP:15074698; identified by sequence similarity NP_744664.1 similar to GP:7573253; identified by sequence similarity NP_744665.1 identified by match to PFAM protein family HMM PF03573 NP_744666.2 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway NP_744668.1 identified by match to PFAM protein family HMM PF01609 NP_744669.1 similar to GB:S61233, PID:385925, and GB:AE000666; identified by sequence similarity NP_744670.1 identified by match to PFAM protein family HMM PF02463 NP_744672.1 identified by match to PFAM protein family HMM PF04284 NP_744673.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol NP_744676.1 similar to GP:4902474; identified by sequence similarity NP_744678.1 identified by match to PFAM protein family HMM PF00389 NP_744679.1 similar to GP:9949236; identified by sequence similarity NP_744680.1 similar to SP:P25156, GB:X59507, and PID:395159; identified by sequence similarity NP_744681.1 identified by match to PFAM protein family HMM PF02798 NP_744684.1 similar to GP:9948229; identified by sequence similarity NP_744685.1 similar to GB:L08822, SP:P37947, PID:142836, and PID:1934840; identified by sequence similarity NP_744686.1 similar to GP:6642785; identified by sequence similarity NP_744687.1 identified by match to PFAM protein family HMM PF00155 NP_744688.1 identified by match to PFAM protein family HMM PF04172 NP_744690.1 similar to SP:P76145, SP:P02930, GB:X54049, PID:43101, PID:43107, PID:882565, GB:U00096, and PID:1789413; identified by sequence similarity NP_744692.1 identified by match to PFAM protein family HMM PF03466 NP_744693.1 identified by match to TIGR protein family HMM TIGR00880 NP_744694.1 identified by match to PFAM protein family HMM PF01593 NP_744695.1 identified by match to TIGR protein family HMM TIGR01033 NP_744696.1 identified by match to PFAM protein family HMM PF03466 NP_744697.1 similar to GP:4512701, SP:P10028, SP:P11904, GB:X04268, PID:43002, and PID:452844; identified by sequence similarity NP_744698.1 similar to GP:11071219; identified by sequence similarity NP_744699.1 similar to GB:M34065, SP:P30307, and PID:180176; identified by sequence similarity NP_744700.1 similar to GB:M94964, PID:531810, and SP:P45602; identified by sequence similarity NP_744701.1 similar to GP:6655031; identified by sequence similarity NP_744702.1 similar to GP:9946743; identified by sequence similarity NP_744703.1 similar to GP:6624217, and GP:6624217; identified by sequence similarity NP_744704.1 similar to GB:S71018, and SP:P45877; identified by sequence similarity NP_744705.1 similar to GP:4826416; identified by sequence similarity NP_744706.1 identified by match to PFAM protein family HMM PF00353 NP_744707.1 identified by match to PFAM protein family HMM PF00857 NP_744708.1 similar to GP:2052249; identified by sequence similarity NP_744709.1 similar to GP:5354199; identified by sequence similarity NP_744710.1 identified by match to PFAM protein family HMM PF00580 NP_744711.1 identified by match to PFAM protein family HMM PF00560 NP_744712.1 identified by match to TIGR protein family HMM TIGR01738 NP_744713.1 identified by match to TIGR protein family HMM TIGR00068 NP_744714.1 similar to GB:U10554, GB:U09210, PID:507744, and PID:769848; identified by sequence similarity NP_744715.1 similar to GP:6723233; identified by sequence similarity NP_744718.1 identified by match to PFAM protein family HMM PF00903 NP_744719.1 identified by match to PFAM protein family HMM PF03466 NP_744721.1 similar to GB:L02321, SP:P46439, and PID:468260; identified by sequence similarity NP_744722.1 similar to GP:17427611; identified by sequence similarity NP_744723.1 identified by match to PFAM protein family HMM PF02418 NP_744726.1 similar to GP:8163802, and GP:8163802; identified by sequence similarity NP_744727.1 similar to GB:X63763, and PID:47586; identified by sequence similarity NP_744728.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway. NP_744729.1 identified by match to TIGR protein family HMM TIGR01722 NP_744730.1 identified by match to PFAM protein family HMM PF03647 NP_744731.1 identified by match to PFAM protein family HMM PF00196 NP_744732.1 similar to SP:P32724, GB:X58406, PID:581361, PID:2094830, and GB:AL123456; identified by sequence similarity NP_744733.1 similar to GP:9946056; identified by sequence similarity NP_744734.1 similar to GB:M16038, SP:P07948, PID:307144, GB:M16038, SP:P07948, and PID:307144; identified by sequence similarity NP_744735.1 similar to GB:X58536, GB:M12679, GB:M26432, GB:M28171, GB:M84386, GB:U06487, GB:U07230, GB:D31817, GB:Z47377, GB:L54059, GB:X96582, GB:U60422, SP:P01889, SP:P04222, SP:P10321, SP:P30484, SP:P30499, SP:P30500, SP:P30501, SP:P30502, SP:P30503, SP:P30504, SP:P30505, SP:P30506, SP:P30507, SP:P30508, SP:P30509, SP:P30510, SP:Q07000, GB:Y09156, PID:1448997, PID:1561555, PID:1857768, PID:2245531, PID:2394348, PID:2394350, PID:32235, PID:386891, PID:472312, PID:474336, PID:488362, PID:495038, PID:495040, PID:505388, PID:520835, PID:531198, PID:553532, PID:553541, PID:555682, PID:557643, PID:576473, PID:576477, PID:576479, PID:599786, PID:599788, PID:642239, PID:669132, PID:695256, PID:695258, PID:825674, and PID:951150; identified by sequence similarity NP_744736.1 similar to GP:10173642, GB:X55150, GB:X55150, GB:L05407, GB:L05408, GB:L05409, GB:L05410, GB:L05411, GB:L05412, GB:L05413, GB:L05414, GB:L05415, GB:L05416, GB:L05417, GB:L05418, GB:L05419, GB:L05420, GB:L05421, GB:L05422, GB:L05424, GB:X66733, GB:M83327, GB:L05423, GB:S66400, GB:S66400, GB:S66400, GB:M59040, GB:M69215, GB:D28477, GB:M83324, GB:M83325, GB:M83326, GB:M83328, GB:X55938, GB:S72928, GB:X56794, GB:X62739, SP:P16070, SP:P22511, PID:950416, PID:950418, PID:950420, and PID:950422; identified by sequence similarity NP_744737.1 similar to GB:M20471, SP:P09496, PID:179397, GB:M20471, SP:P09496, and PID:179397; identified by sequence similarity NP_744738.1 similar to GB:M15881, SP:P07911, PID:340164, PID:340166, GB:M15881, SP:P07911, PID:340164, and PID:340166; identified by sequence similarity NP_744739.1 similar to GP:6714810; identified by sequence similarity NP_744740.1 identified by match to TIGR protein family HMM TIGR00960 NP_744741.1 identified by match to PFAM protein family HMM PF00440 NP_744743.1 identified by match to PFAM protein family HMM PF02743 NP_744744.1 proposed role in polysaccahride synthesis NP_744745.1 identified by match to PFAM protein family HMM PF01614 NP_744746.1 identified by match to PFAM protein family HMM PF02894 NP_744748.1 similar to GB:M13267, GB:X02317, GB:K00065, GB:X01662, GB:X01780, GB:X01781, GB:X01782, GB:X01783, GB:X01784, GB:X81859, GB:X95228, SP:P00441, PID:1237406, PID:1237407, PID:1335314, PID:1335315, PID:1335317, PID:1335318, PID:338276, PID:36535, PID:36542, and PID:939773; identified by sequence similarity NP_744749.1 similar to GP:9948269; identified by sequence similarity NP_744750.1 similar to GP:5912096, and GP:7023833; identified by sequence similarity NP_744751.1 similar to GP:9948269; identified by sequence similarity NP_744752.1 similar to GB:X57766, SP:P24347, PID:456257, and PID:987949; identified by sequence similarity NP_744753.1 similar to GP:6646870; identified by sequence similarity NP_744754.1 similar to GP:15158890; identified by sequence similarity NP_744758.1 similar to GP:2920640; identified by sequence similarity NP_744759.1 similar to GP:2920641; identified by sequence similarity NP_744763.1 identified by match to PFAM protein family HMM PF00498 NP_744767.1 identified by match to PFAM protein family HMM PF00595 NP_744768.1 similar to GP:2920642, and GP:2920642; identified by sequence similarity NP_744772.1 similar to GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, and PID:458555; identified by sequence similarity NP_744773.1 similar to GB:L10320, GB:D26054, GB:D26055, GB:D26056, GB:U47919, GB:U47918, SP:P09467, PID:1200520, PID:1200522, PID:178349, PID:182311, PID:439226, PID:439228, and PID:439230; identified by sequence similarity NP_744774.1 similar to GB:L10320, GB:D26054, GB:D26055, GB:D26056, GB:U47919, GB:U47918, SP:P09467, PID:1200520, PID:1200522, PID:178349, PID:182311, PID:439226, PID:439228, and PID:439230; identified by sequence similarity NP_744779.1 polymerizes uridine 5'-diphosphate glucose to cellulose; acts with BcsB, BcsZ and BcsC in cellulose biosynthesis NP_744780.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) NP_744781.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans NP_744782.1 cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA NP_744783.1 identified by match to PFAM protein family HMM PF00701 NP_744784.1 similar to GB:M23326, GB:X15261, GB:X13954, PID:1049195, PID:2358067, PID:312412, PID:37046, PID:37048, PID:37298, PID:37324, and PID:540457; identified by sequence similarity NP_744785.1 similar to SP:P37911, GB:X07469, SP:P08149, GB:M32091, GB:X07468, GB:X07470, GB:X59632, PID:150279, PID:44911, PID:44913, PID:44915, and PID:509155; identified by sequence similarity NP_744786.1 identified by match to PFAM protein family HMM PF00155 NP_744787.1 similar to GP:9947573; identified by sequence similarity NP_744789.1 similar to GB:X60459, SP:P17181, PID:1247459, PID:1247461, PID:1567383, PID:1567385, PID:306914, and PID:32672; identified by sequence similarity NP_744791.1 similar to GP:5738822; identified by sequence similarity NP_744792.1 identified by match to PFAM protein family HMM PF00582 NP_744793.1 similar to GP:9948229; identified by sequence similarity NP_744794.1 similar to GP:5916169, GB:U08997, GB:X66310, GB:X53144, GB:X53147, SP:P00367, SP:P49448, PID:31815, PID:478988, and PID:579924; identified by sequence similarity NP_744795.1 identified by match to PFAM protein family HMM PF03977 NP_744796.1 similar to GP:9478254; identified by sequence similarity NP_744797.1 similar to GP:3560014; identified by sequence similarity NP_744798.1 identified by match to PFAM protein family HMM PF01124 NP_744800.1 similar to GB:D90359, GB:M73442, GB:M73444, GB:X07024, SP:P21675, PID:29733, GB:L13385, GB:L13386, GB:L13387, SP:P43034, PID:1850956, PID:349824, PID:349826, PID:349828, GB:L13385, GB:L13386, GB:L13387, SP:P43034, PID:1850956, PID:349824, PID:349826, and PID:349828; identified by sequence similarity NP_744801.1 identified by match to PFAM protein family HMM PF00528 NP_744802.1 similar to GB:M20132, GB:L29496, GB:M20260, SP:P10275, PID:178628, PID:178872, PID:178882, PID:178892, PID:178894, PID:178906, PID:460281, GB:L13385, GB:L13386, GB:L13387, SP:P43034, PID:1850956, PID:349824, PID:349826, and PID:349828; identified by sequence similarity NP_744803.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation NP_744807.1 similar to GP:9947975; identified by sequence similarity NP_744808.1 identified by match to PFAM protein family HMM PF02518 NP_744809.1 similar to GB:M89651, GB:D16366, GB:L49169, SP:P53539, and PID:1082038; identified by sequence similarity NP_744811.1 similar to SP:P16542, GB:X16300, PID:47992, and PID:47978; identified by sequence similarity NP_744812.1 similar to GP:10173669; identified by sequence similarity NP_744813.1 similar to GB:X64062, SP:Q00637, PID:1335657, and PID:409457; identified by sequence similarity NP_744815.1 similar to GP:8671337; identified by sequence similarity NP_744816.1 similar to GP:8671336; identified by sequence similarity NP_744817.1 identified by match to PFAM protein family HMM PF00805 NP_744818.1 identified by match to PFAM protein family HMM PF01011 NP_744819.1 similar to GP:9947984; identified by sequence similarity NP_744820.1 identified by match to TIGR protein family HMM TIGR01096 NP_744822.1 identified by match to PFAM protein family HMM PF00753 NP_744823.1 identified by match to PFAM protein family HMM PF01011 NP_744824.1 identified by match to TIGR protein family HMM TIGR01722 NP_744825.1 with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone NP_744826.1 identified by match to PFAM protein family HMM PF00465 NP_744827.1 identified by match to PFAM protein family HMM PF02518 NP_744829.1 identified by match to PFAM protein family HMM PF00227 NP_744830.1 identified by match to PFAM protein family HMM PF01841 NP_744831.1 identified by match to PFAM protein family HMM PF04168 NP_744832.1 identified by match to PFAM protein family HMM PF04174 NP_744833.1 similar to GB:J03732, SP:P03813, PID:145322, PID:882733, PID:1128956, GB:U00096, and PID:1789205; identified by sequence similarity NP_744836.1 identified by match to PFAM protein family HMM PF02028 NP_744837.1 similar to GP:15140243; identified by sequence similarity NP_744838.1 identified by match to TIGR protein family HMM TIGR01722 NP_744839.1 similar to GB:X60036, GB:X77337, and SP:Q00325; identified by sequence similarity NP_744840.1 similar to GB:X59618, SP:P31350, and PID:36155; identified by sequence similarity NP_744841.1 identified by match to PFAM protein family HMM PF01613 NP_744842.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate NP_744844.1 similar to GP:5441879; identified by sequence similarity NP_744845.1 similar to SP:P12985, and PID:48337; identified by sequence similarity NP_744846.1 similar to GB:D13969, SP:P35227, PID:285933, GB:D13969, SP:P35227, and PID:285933; identified by sequence similarity NP_744847.1 identified by match to PFAM protein family HMM PF00083 NP_744848.1 similar to GB:M25667, GB:S66533, GB:S66534, GB:S66541, SP:P17677, and PID:182970; identified by sequence similarity NP_744851.1 identified by match to TIGR protein family HMM TIGR00633 NP_744853.1 identified by match to TIGR protein family HMM TIGR01734 NP_744854.1 similar to GP:9658555; identified by sequence similarity NP_744855.1 identified by match to TIGR protein family HMM TIGR01500 NP_744857.1 identified by match to TIGR protein family HMM TIGR01387 NP_744858.1 identified by match to PFAM protein family HMM PF00512 NP_744859.1 identified by match to PFAM protein family HMM PF03358 NP_744860.1 similar to GP:3095052, and GP:3095052; identified by sequence similarity NP_744861.1 similar to GP:3095051; identified by sequence similarity NP_744862.1 similar to GP:11691633; identified by sequence similarity NP_744866.1 identified by match to PFAM protein family HMM PF03794 NP_744867.1 similar to SP:P32687, PID:409796, GB:U00096, and PID:1790459; identified by sequence similarity NP_744869.1 identified by match to TIGR protein family HMM TIGR01382 NP_744870.1 identified by match to PFAM protein family HMM PF04239 NP_744871.1 similar to SP:P21158; identified by sequence similarity NP_744872.1 similar to GB:D00496, SP:P17166, PID:216760, GB:D00496, SP:P17166, and PID:216760; identified by sequence similarity NP_744873.1 identified by match to PFAM protein family HMM PF00042 NP_744876.1 identified by match to PFAM protein family HMM PF04244 NP_744878.1 identified by match to PFAM protein family HMM PF02353 NP_744880.1 identified by match to PFAM protein family HMM PF01593 NP_744881.1 identified by match to TIGR protein family HMM TIGR01500 NP_744883.1 similar to GB:L40411, SP:Q15652, and PID:703116; identified by sequence similarity NP_744884.1 identified by match to PFAM protein family HMM PF00376 NP_744885.1 similar to GB:X71874, SP:P40306, PID:406227, GB:X71874, SP:P40306, and PID:406227; identified by sequence similarity NP_744887.1 similar to GP:11061692; identified by sequence similarity NP_744888.1 similar to SP:P08330; identified by sequence similarity NP_744889.1 similar to SP:P03807; identified by sequence similarity NP_744890.1 similar to GP:9948360; identified by sequence similarity NP_744891.1 similar to GB:M68571, SP:P26979, and PID:154368; identified by sequence similarity NP_744892.1 similar to GP:6752325; identified by sequence similarity NP_744893.1 similar to GB:M58480, SP:P24695, and PID:154644; identified by sequence similarity NP_744894.1 similar to GP:9756928; identified by sequence similarity NP_744897.1 similar to SP:P22731; identified by sequence similarity NP_744898.1 similar to GP:9945994; identified by sequence similarity NP_744899.1 identified by match to PFAM protein family HMM PF00441 NP_744901.1 similar to GP:6714794; identified by sequence similarity NP_744902.1 similar to GB:L25415, PID:496154, and SP:P53662; identified by sequence similarity NP_744903.1 similar to GP:6714793; identified by sequence similarity NP_744904.1 similar to GP:6714794; identified by sequence similarity NP_744905.1 similar to GP:6714794; identified by sequence similarity NP_744906.1 identified by match to PFAM protein family HMM PF02770 NP_744908.1 identified by match to PFAM protein family HMM PF03358 NP_744909.1 similar to SP:P40402; identified by sequence similarity NP_744910.1 similar to GB:M68571, SP:P26979, PID:154368, GB:M68571, SP:P26979, and PID:154368; identified by sequence similarity NP_744911.1 similar to GP:6752325; identified by sequence similarity NP_744912.1 similar to GB:M58480, SP:P24695, and PID:154644; identified by sequence similarity NP_744913.1 similar to GP:9756928; identified by sequence similarity NP_744915.1 identified by match to TIGR protein family HMM TIGR01199 NP_744916.1 similar to GP:2582423; identified by sequence similarity NP_744918.1 similar to GP:9367460; identified by sequence similarity NP_744919.1 similar to GP:7188801; identified by sequence similarity NP_744920.1 similar to GB:U02081, and PID:548082; identified by sequence similarity NP_744921.1 identified by match to PFAM protein family HMM PF00550 NP_744922.1 similar to GB:X73124, SP:P39638, PID:414004, and GB:AL009126; identified by sequence similarity NP_744923.1 similar to GP:7209616; identified by sequence similarity NP_744924.1 similar to GP:2738156, GB:X73124, SP:P39638, PID:414004, and GB:AL009126; identified by sequence similarity NP_744925.1 identified by match to PFAM protein family HMM PF04198 NP_744926.1 similar to SP:P42588; identified by sequence similarity NP_744927.1 similar to GP:1502421, SP:P25921, and PID:150653; identified by sequence similarity NP_744928.1 identified by match to TIGR protein family HMM TIGR01500 NP_744931.1 identified by match to PFAM protein family HMM PF04276 NP_744932.1 similar to GP:6179679; identified by sequence similarity NP_744933.1 identified by match to PFAM protein family HMM PF03358 NP_744934.1 identified by match to PFAM protein family HMM PF02954 NP_744935.1 identified by match to PFAM protein family HMM PF01636 NP_744937.1 similar to GP:6683573; identified by sequence similarity NP_744938.1 identified by match to TIGR protein family HMM TIGR01500 NP_744939.1 activates fatty acids by binding to coenzyme A NP_744940.1 similar to GP:9949357; identified by sequence similarity NP_744941.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake NP_744942.1 similar to GP:6759577, GB:L29436, and PID:459909; identified by sequence similarity NP_744943.1 similar to GP:9802157; identified by sequence similarity NP_744944.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde NP_744945.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation NP_744946.1 identified by match to PFAM protein family HMM PF01988 NP_744947.1 similar to GB:U11552, GB:U09353, PID:1314483, PID:1513077, PID:520485, and PID:558082; identified by sequence similarity NP_744948.1 similar to GP:9454064, and GP:12698395; identified by sequence similarity NP_744949.1 similar to GB:Z36940, SP:P45491, and PID:535811; identified by sequence similarity NP_744950.1 similar to GP:5420026; identified by sequence similarity NP_744951.1 similar to GP:11035010; identified by sequence similarity NP_744952.1 identified by match to PFAM protein family HMM PF01494 NP_744954.1 similar to GB:X56958, SP:Q01485, PID:29491, GB:X56958, SP:Q01485, and PID:29491; identified by sequence similarity NP_744956.1 similar to GP:9949187, and GP:12698403; identified by sequence similarity NP_744957.1 identified by match to PFAM protein family HMM PF02012 NP_744958.1 similar to GP:11035010; identified by sequence similarity NP_744959.1 similar to GB:L09107, PID:152843, GB:U09891, and PID:497352; identified by sequence similarity NP_744960.1 similar to GB:M17589, GB:M24787, GB:M24788, GB:M24791, GB:M24789, GB:M18114, GB:M20912, GB:M20911, SP:P07101, PID:339681, PID:37127, PID:548155, PID:548156, and PID:556224; identified by sequence similarity NP_744961.1 similar to GB:U12892, PID:530857, GB:U12892, and PID:530857; identified by sequence similarity NP_744962.1 identified by match to PFAM protein family HMM PF04165 NP_744963.1 identified by match to PFAM protein family HMM PF02321 NP_744964.1 similar to GB:M17589, GB:M24787, GB:M24788, GB:M24791, GB:M24789, GB:M18114, GB:M20912, GB:M20911, SP:P07101, PID:339681, PID:37127, PID:548155, PID:548156, and PID:556224; identified by sequence similarity NP_744967.1 identified by match to PFAM protein family HMM PF00672 NP_744968.1 similar to GP:7228269; identified by sequence similarity NP_744969.1 similar to GP:6179516, GB:X06985, GB:M23041, GB:M23042, SP:P09601, PID:35173, and PID:557552; identified by sequence similarity NP_744970.1 similar to GP:7801208, and GP:3646369; identified by sequence similarity NP_744971.1 identified by match to TIGR protein family HMM TIGR01751 NP_744973.1 identified by match to PFAM protein family HMM PF00392 NP_744974.1 similar to GB:L34058, SP:P55290, PID:1381790, PID:1381792, PID:506408, GB:L34058, SP:P55290, PID:1381790, PID:1381792, and PID:506408; identified by sequence similarity NP_744975.1 similar to GP:1150421; identified by sequence similarity NP_744976.1 identified by match to PFAM protein family HMM PF03466 NP_744977.1 similar to GP:9948229; identified by sequence similarity NP_744978.1 similar to GP:10173103, GB:M25393, SP:P17706, and PID:804750; identified by sequence similarity NP_744979.1 identified by match to PFAM protein family HMM PF02615 NP_744980.1 similar to GP:5881930; identified by sequence similarity NP_744981.1 identified by match to TIGR protein family HMM TIGR00881 NP_744983.1 similar to GP:9947855; identified by sequence similarity NP_744984.1 similar to GP:9948733; identified by sequence similarity NP_744985.1 similar to GP:2625019; identified by sequence similarity NP_744986.1 similar to SP:Q09063, GB:J03241, GB:X14885, GB:X14886, GB:X14887, GB:X14888, GB:X14889, GB:X14890, GB:X14891, SP:P10600, PID:1200236, PID:339552, PID:37096, and PID:553517; identified by sequence similarity NP_744987.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter NP_744988.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active NP_744989.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits NP_744990.1 involved in the assembly of the urease metallocenter; possible nickel donor NP_744991.1 similar to GP:2340845, GB:L19521, and PID:310858; identified by sequence similarity NP_744992.1 similar to GB:D13635, PID:285983, GB:D13635, and PID:285983; identified by sequence similarity NP_744993.1 similar to GB:M27717, GB:M73716, GB:M73717, GB:M73718, GB:M73719, GB:M73720, GB:S40234, SP:P15088, PID:179934, and PID:187442; identified by sequence similarity NP_744995.1 similar to GP:9947291; identified by sequence similarity NP_744996.1 similar to GP:9947033, GB:J02694, GB:S56200, GB:M19508, GB:X15377, GB:M17170, GB:M17171, GB:M17172, GB:M17173, GB:M17174, GB:M17175, GB:M17176, SP:P05164, PID:188658, PID:188669, PID:189040, PID:2160397, PID:34719, PID:34722, PID:386956, and PID:412186; identified by sequence similarity NP_744997.1 similar to GP:9947949; identified by sequence similarity NP_744999.1 identified by match to PFAM protein family HMM PF03412 NP_745000.1 similar to GP:9947952; identified by sequence similarity NP_745003.1 identified by match to TIGR protein family HMM TIGR01526 NP_745004.1 similar to GP:9947956; identified by sequence similarity NP_745005.1 identified by match to PFAM protein family HMM PF00672 NP_745006.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell NP_745007.1 similar to GP:9947958; identified by sequence similarity NP_745008.1 similar to GP:9947997, and GP:9947997; identified by sequence similarity NP_745009.1 similar to GP:9947959; identified by sequence similarity NP_745010.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds NP_745011.1 identified by match to PFAM protein family HMM PF00070 NP_745012.1 identified by match to PFAM protein family HMM PF01381 NP_745013.1 identified by match to TIGR protein family HMM TIGR00137 NP_745014.1 similar to GB:D10570, GB:M83215, GB:S60998, SP:Q01196, PID:1932820, PID:530135, PID:557639, PID:608133, PID:966995, PID:966997, and PID:966999; identified by sequence similarity NP_745015.1 identified by match to TIGR protein family HMM TIGR01086 NP_745016.1 identified by match to PFAM protein family HMM PF00892 NP_745017.1 similar to SP:Q02470, PID:149582, SP:Q02470, and PID:149582; identified by sequence similarity NP_745020.1 similar to GB:L10338, GB:L16242, SP:Q07699, PID:307415, PID:450603, and PID:619592; identified by sequence similarity NP_745021.1 identified by match to TIGR protein family HMM TIGR00832 NP_745024.1 identified by match to PFAM protein family HMM PF00440 NP_745025.1 identified by match to PFAM protein family HMM PF00106 NP_745026.1 similar to SP:Q51948; identified by sequence similarity NP_745028.1 similar to GB:J02732, SP:P12047, PID:143366, and GB:AL009126; identified by sequence similarity NP_745029.1 identified by match to PFAM protein family HMM PF03600 NP_745030.1 similar to GP:10178909, and SP:P08732; identified by sequence similarity NP_745031.1 similar to GB:U07497, SP:P01621, SP:P04207, PID:470530, PID:470562, PID:470568, PID:470570, PID:470572, PID:470574, PID:470578, PID:470580, PID:470582, PID:470584, PID:470588, PID:470590, PID:553486, PID:560766, PID:619431, PID:619617, PID:619761, PID:619767, PID:619768, PID:619769, PID:681900, PID:722416, PID:722424, PID:722438, PID:722454, PID:722516, PID:722576, PID:722582, PID:722584, PID:860992, PID:860996, PID:860998, GB:U08839, GB:Z46797, SP:Q03405, PID:512464, PID:517198, and PID:533376; identified by sequence similarity NP_745032.1 similar to GP:8895713, and GP:8895713; identified by sequence similarity NP_745033.1 similar to GP:8895711, and GP:8895711; identified by sequence similarity NP_745034.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction NP_745035.1 identified by match to PFAM protein family HMM PF00583 NP_745036.1 identified by match to PFAM protein family HMM PF03561 NP_745037.1 similar to GP:9948600; identified by sequence similarity NP_745039.1 similar to SP:P27126, GB:M80599, PID:146654, PID:466767, GB:U00096, PID:1790059, SP:P27126, GB:M80599, PID:146654, PID:466767, GB:U00096, and PID:1790059; identified by sequence similarity NP_745045.1 similar to GB:X52138, GB:M36072, GB:X06705, GB:X61923, SP:P11518, PID:337495, PID:34203, PID:35512, and PID:36647; identified by sequence similarity NP_745046.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine NP_745047.1 identified by match to PFAM protein family HMM PF00160 NP_745048.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_745049.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA NP_745050.1 similar to GB:L31579, and PID:468364; identified by sequence similarity NP_745051.1 similar to GB:L31579, and PID:468364; identified by sequence similarity NP_745052.1 regulator of gab gene expression NP_745053.1 in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution NP_745054.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate NP_745055.1 similar to GB:X53331, GB:X07362, GB:M55270, GB:M58549, SP:P08493, PID:187591, PID:187593, PID:34614, and PID:34618; identified by sequence similarity NP_745056.1 identified by match to PFAM protein family HMM PF01163 NP_745057.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate NP_745058.1 similar to GP:1661219; identified by sequence similarity NP_745059.1 similar to GP:9946095; identified by sequence similarity NP_745060.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine NP_745062.1 similar to GP:6724082, and GP:6724082; identified by sequence similarity NP_745063.1 identified by match to PFAM protein family HMM PF03466 NP_745064.1 identified by match to PFAM protein family HMM PF03746 NP_745065.1 identified by match to TIGR protein family HMM TIGR00370 NP_745066.1 identified by match to PFAM protein family HMM PF02626 NP_745067.1 similar to GP:5918205, and GP:5918205; identified by sequence similarity NP_745068.1 similar to SP:P03805, GB:J01611, PID:145265, PID:41483, PID:536996, GB:U00096, PID:1790595, SP:P03805, GB:J01611, PID:145265, PID:41483, PID:536996, GB:U00096, and PID:1790595; identified by sequence similarity NP_745069.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate NP_745070.1 identified by match to PFAM protein family HMM PF00984 NP_745071.1 identified by match to PFAM protein family HMM PF02390 NP_745072.1 identified by match to PFAM protein family HMM PF02896 NP_745073.1 similar to GB:M80629, and PID:180492; identified by sequence similarity NP_745074.1 similar to GP:57225, and SP:P17324; identified by sequence similarity NP_745075.1 similar to GP:5459226, and GP:5459226; identified by sequence similarity NP_745076.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia NP_745077.1 YghU; B2989; one of eight glutathione transferases from E. coli NP_745078.1 identified by match to TIGR protein family HMM TIGR01738 NP_745079.1 identified by match to PFAM protein family HMM PF00083 NP_745080.1 similar to GP:9947963; identified by sequence similarity NP_745081.1 similar to GP:13361683, GB:D26350, and PID:450469; identified by sequence similarity NP_745082.1 similar to GP:9657729; identified by sequence similarity NP_745083.1 similar to GP:4469318, and GP:4469318; identified by sequence similarity NP_745084.1 similar to SP:P46147, GB:M34482, GB:X74929, GB:M77025, GB:M26324, GB:M26512, GB:X12882, GB:M26513, GB:X74981, SP:P05787, GB:U76549, PID:181400, PID:181573, PID:307083, PID:400416, PID:400418, and PID:553163; identified by sequence similarity NP_745085.1 similar to GP:9187583, and GP:9187583; identified by sequence similarity NP_745086.1 identified by match to PFAM protein family HMM PF00072 NP_745087.1 identified by match to PFAM protein family HMM PF03150 NP_745088.1 identified by match to PFAM protein family HMM PF02518 NP_745089.1 identified by match to PFAM protein family HMM PF02518 NP_745090.1 similar to GB:L04282, GB:U09851, PID:388319, and PID:495574; identified by sequence similarity NP_745092.1 identified by match to PFAM protein family HMM PF00155 NP_745093.1 identified by match to PFAM protein family HMM PF00892 NP_745094.1 similar to GP:9951720; identified by sequence similarity NP_745095.1 similar to GP:3293540; identified by sequence similarity NP_745096.1 similar to GP:9949718; identified by sequence similarity NP_745097.1 identified by match to TIGR protein family HMM TIGR01751 NP_745098.1 similar to SP:P28816, GB:J01830, PID:154849, GB:M69197, GB:X00442, GB:L29394, GB:K01763, GB:X00637, GB:X01793, GB:X01786, GB:X02206, GB:X01789, GB:X01791, GB:X00606, GB:M13908, GB:K00422, GB:M12387, GB:M10935, SP:P00737, SP:P00738, PID:1212947, PID:306880, and PID:758071; identified by sequence similarity NP_745099.1 similar to GB:L19084, SP:P33668, PID:304942, GB:U00096, PID:1773180, and PID:1786707; identified by sequence similarity NP_745100.1 similar to GB:X57130, and PID:296288; identified by sequence similarity NP_745101.1 identified by match to TIGR protein family HMM TIGR01575 NP_745102.1 similar to SP:P37687; identified by sequence similarity NP_745103.1 similar to GB:X78031, SP:Q11130, PID:516293, PID:520464, and PID:520525; identified by sequence similarity NP_745104.1 similar to GP:9106236; identified by sequence similarity NP_745105.1 identified by match to PFAM protein family HMM PF03466 NP_745106.1 similar to GP:6808410; identified by sequence similarity NP_745108.1 similar to GP:1495195, GB:U04735, SP:P48723, and PID:460148; identified by sequence similarity NP_745109.1 similar to GP:3805951, and GP:6625482; identified by sequence similarity NP_745111.1 similar to GP:7363298; identified by sequence similarity NP_745112.1 similar to SP:P18021, SP:P06615, GB:X04967, PID:144169, PID:147038, SP:P18021, SP:P06615, GB:X04967, PID:144169, and PID:147038; identified by sequence similarity NP_745113.1 similar to SP:P09123, PID:452398, GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, and PID:507429; identified by sequence similarity NP_745115.1 similar to GB:Z11584, GB:Z11583, GB:Z14227, GB:Z14229, GB:Z14228, GB:Z11584, GB:Z11583, GB:Z14227, GB:Z14229, and GB:Z14228; identified by sequence similarity NP_745117.1 similar to SP:P00556; identified by sequence similarity NP_745119.1 similar to GP:10880734, and GP:2645860; identified by sequence similarity NP_745120.1 similar to GP:5524528; identified by sequence similarity NP_745121.1 similar to GP:5524529; identified by sequence similarity NP_745124.1 similar to SP:P18539, PID:47224, SP:P18539, and PID:47224; identified by sequence similarity NP_745125.1 similar to GP:5524530; identified by sequence similarity NP_745126.1 similar to GP:5524531, and GP:5524531; identified by sequence similarity NP_745129.1 similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity NP_745130.1 similar to SP:P80064, and SP:P80064; identified by sequence similarity NP_745131.1 identified by match to PFAM protein family HMM PF03551 NP_745132.1 similar to GP:3293547; identified by sequence similarity NP_745133.1 identified by match to TIGR protein family HMM TIGR01500 NP_745134.1 identified by match to PFAM protein family HMM PF00376 NP_745136.1 identified by match to TIGR protein family HMM TIGR01382 NP_745138.1 identified by match to PFAM protein family HMM PF00724 NP_745139.1 similar to GP:10173629, GB:L28824, GB:S80267, SP:P43405, PID:479013, PID:496900, and PID:515871; identified by sequence similarity NP_745141.1 similar to GB:X56667, GB:X56668, SP:P22676, PID:29636, PID:695356, and PID:825634; identified by sequence similarity NP_745142.1 identified by match to TIGR protein family HMM TIGR00745 NP_745143.1 identified by match to PFAM protein family HMM PF00903 NP_745144.1 similar to SP:P37961, PID:396223, and PID:551717; identified by sequence similarity NP_745145.1 identified by match to PFAM protein family HMM PF02515 NP_745146.1 similar to GB:X57766, SP:P24347, PID:456257, and PID:987949; identified by sequence similarity NP_745147.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis NP_745150.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription NP_745152.1 similar to GB:M17087, GB:M54968, GB:M35504, GB:M34904, GB:M35505, GB:K03209, SP:P01112, SP:P01118, PID:1335026, PID:1335027, PID:180594, PID:186764, PID:190910, PID:553519, PID:553633, PID:553635, PID:553636, and PID:825697; identified by sequence similarity NP_745159.1 identified by match to PFAM protein family HMM PF00501 NP_745160.1 similar to GB:X53586, GB:S66196, GB:X59512, SP:P23229, PID:33942, PID:33944, GB:K01884, SP:P01124, and PID:179498; identified by sequence similarity NP_745161.1 similar to GP:7385145; identified by sequence similarity NP_745163.1 identified by match to PFAM protein family HMM PF00795 NP_745164.1 similar to SP:Q05528, GB:X62073, PID:48986, SP:Q05528, GB:X62073, and PID:48986; identified by sequence similarity NP_745165.1 identified by match to PFAM protein family HMM PF01810 NP_745166.1 identified by match to PFAM protein family HMM PF00165 NP_745167.1 identified by match to TIGR protein family HMM TIGR00949 NP_745168.1 identified by match to PFAM protein family HMM PF02518 NP_745169.1 identified by match to PFAM protein family HMM PF01810 NP_745170.1 similar to SP:Q01624, PID:46680, SP:Q01624, and PID:46680; identified by sequence similarity NP_745171.1 similar to GP:4063814; identified by sequence similarity NP_745173.1 identified by match to PFAM protein family HMM PF00145 NP_745175.1 similar to GB:M77836, SP:P32322, PID:189498, GB:M77836, SP:P32322, and PID:189498; identified by sequence similarity NP_745177.1 See PMID: 11069649; PRF04-like; similar to GB:L04569, GB:M57971, GB:Z34811, GB:Z34812, GB:Z34821, GB:Z34822, GB:Z34809, GB:Z34810, GB:Z34813, GB:Z34814, GB:Z34815, GB:Z34816, GB:Z34817, GB:Z34818, GB:Z34819, GB:Z34820, GB:M57972, GB:M91370, GB:Z26294, GB:Z26295, PID:291895, PID:501073, PID:508183, PID:508185, PID:508187, PID:508189, PID:508191, PID:508193, PID:508195, PID:508197, PID:508199, PID:508201, PID:509048, PID:509068, PID:509168, PID:509178, PID:509341, and PID:509344; identified by sequence similarity NP_745181.1 identified by match to PFAM protein family HMM PF01258 NP_745182.1 See PMID: 11069649; PRF06-like NP_745183.1 See PMID: 11069649; PRF07; similar to GP:5725184; identified by sequence similarity NP_745184.1 See PMID: 11069649; PRF09; similar to GP:9946488, GP:5725153, and GP:5725153; identified by sequence similarity NP_745186.1 similar to GP:6723244; identified by sequence similarity NP_745188.1 similar to GP:6723246; identified by sequence similarity NP_745189.1 identified by match to PFAM protein family HMM PF00574 NP_745190.1 similar to GP:311850; identified by sequence similarity NP_745191.1 similar to GP:6723249, GP:6723249, and GP:6723249; identified by sequence similarity NP_745193.1 similar to GP:6723251; identified by sequence similarity NP_745194.1 See PMID: 11069649; PRF10; identified by Glimmer2 NP_745195.1 See PMID: 11069649; PRF11; identified by match to TIGR protein family HMM TIGR01644 NP_745197.1 See PMID: 11069649; PRF12 NP_745198.1 See PMID: 11069649; PRF13; similar to GP:5725158; identified by sequence similarity NP_745199.1 See PMID: 11069649; PRF14; identified by match to TIGR protein family HMM TIGR01634 NP_745200.1 See PMID: 11069649; PRF15; similar to GB:X62539, PID:40033, SP:P02984, SP:P13477, GB:J01574, GB:X15856, GB:M31808, GB:X01162, GB:X02397, PID:144391, PID:144400, PID:41134, and PID:1333745; identified by sequence similarity NP_745203.1 See PMID: 11069649; PRF17; similar to GP:514392; identified by sequence similarity NP_745204.1 See PMID: 11069649; PRF18; similar to PIR:JC5192, SP:P07129, GB:X05793, and PID:580822; identified by sequence similarity NP_745205.1 See PMID: 11069649; PRF19; identified by Glimmer2 NP_745206.1 See PMID: 11069649; PRF20 NP_745207.1 See PMID: 11069649; PRF21 NP_745208.1 See PMID: 11069649; PRF22 NP_745209.1 See PMID: 11069649; PRF23; similar to GP:5725169; identified by sequence similarity NP_745210.1 See PMID: 11069649; PRF24; identified by match to PFAM protein family HMM PF00182 NP_745211.1 identified by match to PFAM protein family HMM PF01850 NP_745213.1 similar to GP:5107805; identified by sequence similarity NP_745214.1 similar to SP:P39159; identified by sequence similarity NP_745215.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase NP_745216.1 serine protease inhibitor, inhibits trypsin and other proteases NP_745217.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate NP_745218.1 similar to GP:9948006; identified by sequence similarity NP_745219.1 identified by match to PFAM protein family HMM PF02954 NP_745220.1 identified by match to PFAM protein family HMM PF03605 NP_745221.1 identified by match to PFAM protein family HMM PF00528 NP_745222.1 identified by match to PFAM protein family HMM PF00496 NP_745223.1 similar to SP:P39159; identified by sequence similarity NP_745224.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive NP_745225.1 similar to SP:P33990, GB:X73561, GB:X80766, PID:405608, PID:677871, SP:P33990, GB:X73561, GB:X80766, PID:405608, and PID:677871; identified by sequence similarity NP_745226.1 similar to GP:9951161; identified by sequence similarity NP_745227.1 similar to GP:9947711, and GP:9947711; identified by sequence similarity NP_745228.1 identified by match to PFAM protein family HMM PF00593 NP_745230.1 identified by match to PFAM protein family HMM PF00776 NP_745231.1 identified by match to PFAM protein family HMM PF03584 NP_745232.1 similar to GP:9945907; identified by sequence similarity NP_745234.1 identified by match to PFAM protein family HMM PF00691 NP_745239.1 identified by match to PFAM protein family HMM PF02861 NP_745242.1 similar to GP:2708664, and GP:9945912; identified by sequence similarity NP_745243.1 similar to GP:2708666, and GP:9948404; identified by sequence similarity NP_745244.1 similar to GP:2708667, and GP:9948403; identified by sequence similarity NP_745245.1 identified by match to PFAM protein family HMM PF03747 NP_745250.1 similar to GP:9945921; identified by sequence similarity NP_745251.1 similar to GP:9945920; identified by sequence similarity NP_745252.1 similar to GP:15130940; identified by sequence similarity NP_745256.1 similar to GP:3785998; identified by sequence similarity NP_745257.1 similar to GP:5824138, and GP:8037784; identified by sequence similarity NP_745258.1 similar to GP:5824139, and GP:8037785; identified by sequence similarity NP_745259.1 similar to SP:P12059, and GB:X52093; identified by sequence similarity NP_745260.1 Represses a number of genes involved in the response to DNA damage NP_745261.1 similar to GB:X07876, SP:P09544, PID:2337863, and PID:33971; identified by sequence similarity NP_745262.1 similar to GP:9946549, and GP:9946549; identified by sequence similarity NP_745263.2 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase. NP_745264.1 identified by match to PFAM protein family HMM PF00248 NP_745265.1 identified by match to PFAM protein family HMM PF03466 NP_745266.1 similar to SP:Q01103; identified by sequence similarity NP_745267.1 identified by match to PFAM protein family HMM PF01144 NP_745268.1 similar to SP:P17161, GB:X03147, and PID:43926; identified by sequence similarity NP_745269.1 identified by match to PFAM protein family HMM PF01381 NP_745270.1 similar to GP:10946230; identified by sequence similarity NP_745271.1 similar to GB:X78084, PID:459545, and SP:Q59835; identified by sequence similarity NP_745272.1 identified by match to TIGR protein family HMM TIGR01007 NP_745273.1 identified by match to TIGR protein family HMM TIGR01746 NP_745274.1 identified by match to PFAM protein family HMM PF01233 NP_745275.1 identified by match to PFAM protein family HMM PF03594 NP_745276.1 identified by match to PFAM protein family HMM PF04290 NP_745277.1 identified by match to PFAM protein family HMM PF00732 NP_745278.1 identified by match to PFAM protein family HMM PF00132 NP_745279.1 similar to GP:6688581; identified by sequence similarity NP_745280.1 similar to GB:M19399, SP:P11278, PID:155483, SP:P18353, PID:398536, and PID:1181551; identified by sequence similarity NP_745281.1 identified by match to PFAM protein family HMM PF00535 NP_745282.1 similar to GP:2961072, and GP:2961072; identified by sequence similarity NP_745283.1 similar to GB:L15409, GB:X96489, GB:U54612, SP:P40337, PID:1235543, PID:1293147, and PID:2282064; identified by sequence similarity NP_745284.1 identified by match to PFAM protein family HMM PF00535 NP_745285.1 similar to GB:M33562, SP:P19911, SP:P19912, PID:141906, PID:901867, GB:M83667, SP:P49716, and PID:189176; identified by sequence similarity NP_745286.1 identified by match to PFAM protein family HMM PF02397 NP_745287.1 similar to GB:L17326, PID:306325, GB:L17326, and PID:306325; identified by sequence similarity NP_745288.1 similar to SP:P42630; identified by sequence similarity NP_745289.1 similar to SP:P05788, PID:40343, SP:P05788, and PID:40343; identified by sequence similarity NP_745290.1 similar to GB:X65867, GB:S60710, SP:P30566, PID:28904, and PID:28905; identified by sequence similarity NP_745291.1 identified by match to PFAM protein family HMM PF02214 NP_745292.1 similar to GB:L23248, and PID:495933; identified by sequence similarity NP_745293.1 similar to SP:Q9ZFU7; identified by sequence similarity NP_745294.1 identified by match to PFAM protein family HMM PF00580 NP_745295.1 similar to SP:P37828, and PID:901847; identified by sequence similarity NP_745296.1 similar to GP:11127717, SP:P19213, PID:2160260, and PID:2160261; identified by sequence similarity NP_745299.1 identified by match to PFAM protein family HMM PF00593 NP_745300.1 similar to SP:P03807; identified by sequence similarity NP_745301.1 similar to GP:10567379; identified by sequence similarity NP_745303.1 similar to GP:7542435, and GP:7542435; identified by sequence similarity NP_745305.1 similar to GP:7542436, and GP:7542436; identified by sequence similarity NP_745306.1 similar to GP:7542437, and GP:7542437; identified by sequence similarity NP_745307.1 with BenAB catalyzes the formation of 2-hydro-1,2-dihydroxybenzoate from benzoate NP_745308.1 catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol NP_745309.1 similar to GP:7542440, and GP:7542440; identified by sequence similarity NP_745310.1 similar to GP:1008926, and GP:1008926; identified by sequence similarity NP_745311.1 similar to GP:7542441, and GP:7542441; identified by sequence similarity NP_745312.1 similar to GP:7542442, and GP:7542442; identified by sequence similarity NP_745313.1 similar to GP:7542443; identified by sequence similarity NP_745314.1 similar to GP:3169721; identified by sequence similarity NP_745315.1 similar to GB:Y00281, SP:P04843, and PID:36053; identified by sequence similarity NP_745316.1 similar to GB:L01112, SP:P45375, PID:145016, and PID:1247706; identified by sequence similarity NP_745317.1 FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide NP_745318.1 similar to GB:U09564, and PID:507213; identified by sequence similarity NP_745319.1 similar to GB:L19299, SP:P41131, PID:304015, GB:X59066, GB:X65460, GB:D28126, GB:D14710, SP:P25705, PID:28938, PID:34468, PID:559317, and PID:559325; identified by sequence similarity NP_745320.1 identified by match to TIGR protein family HMM TIGR00880 NP_745321.1 identified by match to PFAM protein family HMM PF02954 NP_745322.1 identified by match to TIGR protein family HMM TIGR00045 NP_745323.1 identified by match to PFAM protein family HMM PF03466 NP_745324.1 similar to GB:X63575, PID:2193884, GB:X63575, and PID:2193884; identified by sequence similarity NP_745325.1 similar to GP:5524530; identified by sequence similarity NP_745326.1 similar to GP:6759486; identified by sequence similarity NP_745327.1 identified by match to PFAM protein family HMM PF02630 NP_745329.1 similar to GB:X04654, GB:X04654, GB:X06817, GB:X07402, GB:M57928, GB:M57929, GB:M57930, GB:M57931, GB:M57932, GB:M57933, GB:M57934, GB:M57935, GB:M57936, GB:M57937, GB:M57939, GB:X06811, GB:X06812, GB:X06813, GB:X06814, GB:X06815, GB:X06816, GB:X06818, GB:X07403, GB:X84841, GB:X06819, SP:P08621, PID:337445, PID:602021, PID:602023, PID:602025, PID:602027, PID:602344, PID:683580, PID:825725, PID:825726, PID:825727, and SP:P13061; identified by sequence similarity NP_745330.1 similar to GB:X04654, GB:X04654, GB:X06817, GB:X07402, GB:M57928, GB:M57929, GB:M57930, GB:M57931, GB:M57932, GB:M57933, GB:M57934, GB:M57935, GB:M57936, GB:M57937, GB:M57939, GB:X06811, GB:X06812, GB:X06813, GB:X06814, GB:X06815, GB:X06816, GB:X06818, GB:X07403, GB:X84841, GB:X06819, SP:P08621, PID:337445, PID:602021, PID:602023, PID:602025, PID:602027, PID:602344, PID:683580, PID:825725, PID:825726, PID:825727, GB:X04654, GB:X04654, GB:X06817, GB:X07402, GB:M57928, GB:M57929, GB:M57930, GB:M57931, GB:M57932, GB:M57933, GB:M57934, GB:M57935, GB:M57936, GB:M57937, GB:M57939, GB:X06811, GB:X06812, GB:X06813, GB:X06814, GB:X06815, GB:X06816, GB:X06818, GB:X07403, GB:X84841, GB:X06819, SP:P08621, PID:337445, PID:602021, PID:602023, PID:602025, PID:602027, PID:602344, PID:683580, PID:825725, PID:825726, and PID:825727; identified by sequence similarity NP_745331.1 identified by match to PFAM protein family HMM PF03591 NP_745332.1 similar to GP:7619788; identified by sequence similarity NP_745333.1 similar to SP:P25524; identified by sequence similarity NP_745334.1 catalyzes the formation of L-proline from L-ornithine NP_745335.1 similar to GB:Z29635, SP:P46374, and PID:455002; identified by sequence similarity NP_745336.1 identified by match to PFAM protein family HMM PF02796 NP_745337.1 identified by match to PFAM protein family HMM PF03928 NP_745338.1 similar to GP:10175557; identified by sequence similarity NP_745339.1 similar to GB:D16469, GB:X87195, PID:495097, GB:D16469, GB:X87195, and PID:495097; identified by sequence similarity NP_745340.1 similar to GB:X79440, SP:Q16798, and PID:535012; identified by sequence similarity NP_745341.1 similar to GB:X54232, SP:P35052, and PID:31847; identified by sequence similarity NP_745342.1 identified by match to PFAM protein family HMM PF00355 NP_745343.1 similar to SP:P23262; identified by sequence similarity NP_745344.1 similar to GP:3184126, and GP:3184126; identified by sequence similarity NP_745345.1 identified by match to PFAM protein family HMM PF02012 NP_745346.1 similar to GP:9949187; identified by sequence similarity NP_745347.1 identified by match to PFAM protein family HMM PF04171 NP_745349.1 identified by match to TIGR protein family HMM TIGR01266 NP_745350.1 similar to GB:M31651, GB:M27542, GB:X16351, GB:X05403, GB:X05792, GB:X16349, GB:X16350, SP:P04278, SP:P14689, PID:1335305, PID:36452, and PID:825718; identified by sequence similarity NP_745351.1 similar to GP:6018312; identified by sequence similarity NP_745352.1 similar to GB:U04619, PID:439982, and PID:1399285; identified by sequence similarity NP_745353.1 similar to GB:L22971, PID:413755, and SP:P52200; identified by sequence similarity NP_745354.1 similar to GB:L10328, SP:P06128, GB:K01992, GB:M24254, PID:147256, PID:290576, GB:U00096, and PID:2367271; identified by sequence similarity NP_745355.1 identified by match to PFAM protein family HMM PF00005 NP_745356.1 similar to GP:5669522; identified by sequence similarity NP_745357.1 similar to GB:Z25795, SP:P39122, PID:397489, PID:2293137, and GB:AL009126; identified by sequence similarity NP_745358.1 similar to GP:13937484; identified by sequence similarity NP_745360.1 identified by match to PFAM protein family HMM PF04069 NP_745361.1 similar to SP:P37717, GB:X54676, PID:39288, SP:P37717, GB:X54676, and PID:39288; identified by sequence similarity NP_745362.1 similar to SP:O85764; identified by sequence similarity NP_745363.1 identified by match to TIGR protein family HMM TIGR01727 NP_745364.1 similar to GP:3170568; identified by sequence similarity NP_745365.1 similar to GP:3170567; identified by sequence similarity NP_745366.1 similar to GP:3170566; identified by sequence similarity NP_745367.1 similar to GP:9949570; identified by sequence similarity NP_745368.1 similar to GP:10173564; identified by sequence similarity NP_745369.1 identified by match to PFAM protein family HMM PF00441 NP_745370.1 identified by match to PFAM protein family HMM PF03466 NP_745371.1 identified by match to PFAM protein family HMM PF03466 NP_745372.1 similar to SP:P75853; identified by sequence similarity NP_745373.1 identified by match to TIGR protein family HMM TIGR01091 NP_745374.1 similar to GP:7635890, and GP:15139960; identified by sequence similarity NP_745375.1 identified by match to TIGR protein family HMM TIGR01575 NP_745376.1 identified by match to PFAM protein family HMM PF00325 NP_745377.1 identified by match to PFAM protein family HMM PF00011 NP_745378.1 similar to GB:X03349, PID:1197188, and PID:5673; identified by sequence similarity NP_745379.1 similar to GB:U00434, and PID:392549; identified by sequence similarity NP_745380.1 similar to SP:P03807; identified by sequence similarity NP_745381.1 similar to GB:D13173, PID:217113, and SP:P50032; identified by sequence similarity NP_745382.1 similar to GP:5524531, and GP:5524531; identified by sequence similarity NP_745383.1 similar to GP:3204406; identified by sequence similarity NP_745384.1 similar to GB:L08012, PID:311023, and SP:Q56592; identified by sequence similarity NP_745385.1 identified by match to PFAM protein family HMM PF00990 NP_745386.1 identified by match to TIGR protein family HMM TIGR01575 NP_745387.1 identified by match to PFAM protein family HMM PF02308 NP_745389.1 similar to GB:J04982, GB:J03593, GB:J02966, SP:P05141, SP:P12235, PID:178659, PID:339725, PID:339920, GB:J04982, GB:J03593, GB:J02966, SP:P05141, SP:P12235, PID:178659, PID:339725, and PID:339920; identified by sequence similarity NP_745390.1 identified by match to TIGR protein family HMM TIGR00841 NP_745391.1 identified by match to PFAM protein family HMM PF04261 NP_745392.1 similar to GB:L07807, GB:L07810, GB:L07808, GB:L07809, SP:Q05193, PID:181849, and PID:181851; identified by sequence similarity NP_745393.1 identified by match to PFAM protein family HMM PF04172 NP_745395.1 identified by match to TIGR protein family HMM TIGR00537 NP_745396.1 ATP-dependent carboxylate-amine ligase NP_745397.1 similar to SP:P80094; identified by sequence similarity NP_745398.1 identified by match to PFAM protein family HMM PF02735 NP_745399.1 similar to GB:M66160, SP:P26977, and PID:154288; identified by sequence similarity NP_745400.1 similar to GB:X75771, and PID:455422; identified by sequence similarity NP_745401.1 similar to GB:Z23140, SP:P43221, and PID:312981; identified by sequence similarity NP_745402.1 similar to GB:X80061, and PID:510823; identified by sequence similarity NP_745403.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA NP_745404.1 similar to GP:9947860; identified by sequence similarity NP_745405.1 similar to SP:P08002; identified by sequence similarity NP_745407.1 identified by match to PFAM protein family HMM PF00614 NP_745408.1 identified by match to PFAM protein family HMM PF03372 NP_745409.1 identified by match to PFAM protein family HMM PF01904 NP_745410.1 identified by match to PFAM protein family HMM PF00574 NP_745411.1 identified by match to TIGR protein family HMM TIGR00127 NP_745413.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA NP_745414.1 similar to GP:3253207, and GP:3253207; identified by sequence similarity NP_745415.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake NP_745417.1 similar to GP:3253205, and GP:3253205; identified by sequence similarity NP_745418.1 similar to GP:3253204, and GP:3253204; identified by sequence similarity NP_745419.1 similar to GP:3253203, and GP:3253203; identified by sequence similarity NP_745420.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation NP_745421.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA NP_745422.1 similar to GB:M24493, SP:P00362, PID:142952, GB:M24493, SP:P00362, PID:142952, SP:P11886, GB:X14913, and PID:45506; identified by sequence similarity NP_745423.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA NP_745424.1 similar to GP:11072188, and GP:10635044; identified by sequence similarity NP_745425.1 converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation NP_745426.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA NP_745427.1 similar to GP:3253197, and GP:3253197; identified by sequence similarity NP_745428.1 similar to GP:3253209, and GP:3253209; identified by sequence similarity NP_745429.1 similar to GP:3253210, and GP:3253210; identified by sequence similarity NP_745430.1 similar to GP:3253196; identified by sequence similarity NP_745431.1 similar to SP:P03807; identified by sequence similarity NP_745432.1 identified by match to PFAM protein family HMM PF00583 NP_745433.1 identified by match to PFAM protein family HMM PF00582 NP_745434.1 identified by match to PFAM protein family HMM PF00753 NP_745436.1 similar to GP:3413418; identified by sequence similarity NP_745437.1 identified by match to PFAM protein family HMM PF00582 NP_745438.1 identified by match to PFAM protein family HMM PF04143 NP_745439.1 identified by match to PFAM protein family HMM PF03675 NP_745441.1 similar to GP:9948158; identified by sequence similarity NP_745442.1 identified by match to PFAM protein family HMM PF02321 NP_745443.1 identified by match to PFAM protein family HMM PF00440 NP_745444.1 identified by match to TIGR protein family HMM TIGR01740 NP_745445.1 identified by match to PFAM protein family HMM PF00873 NP_745446.2 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP. NP_745447.1 identified by match to TIGR protein family HMM TIGR00880 NP_745448.1 identified by match to PFAM protein family HMM PF03741 NP_745449.1 similar to GP:6714754; identified by sequence similarity NP_745451.1 similar to GP:6425609; identified by sequence similarity NP_745452.1 identified by match to PFAM protein family HMM PF03450 NP_745453.1 similar to GP:2463459; identified by sequence similarity NP_745454.1 similar to GB:U03100, GB:D14705, GB:L22080, GB:D13866, SP:P35221, PID:1172426, PID:347316, PID:404105, PID:433411, GB:Y00281, SP:P04843, and PID:36053; identified by sequence similarity NP_745455.1 similar to GP:13568405; identified by sequence similarity NP_745456.1 similar to GB:M34254, SP:P00309, PID:149776, GB:M34254, SP:P00309, and PID:149776; identified by sequence similarity NP_745457.1 identified by match to PFAM protein family HMM PF00011 NP_745459.1 identified by match to PFAM protein family HMM PF02861 NP_745460.1 similar to GP:9756948; identified by sequence similarity NP_745462.1 similar to GP:6759486; identified by sequence similarity NP_745465.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate NP_745466.1 similar to GB:X59303, GB:X91861, SP:P26640, and PID:31545; identified by sequence similarity NP_745467.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis NP_745468.1 identified by match to PFAM protein family HMM PF00593 NP_745469.1 similar to GB:L10982, GB:L10982, PID:432188, GB:L10982, GB:L10982, and PID:432188; identified by sequence similarity NP_745470.1 similar to GP:15162288; identified by sequence similarity NP_745471.1 similar to GP:3288609; identified by sequence similarity NP_745472.1 identified by match to PFAM protein family HMM PF00593 NP_745474.1 similar to GP:9951825; identified by sequence similarity NP_745475.1 similar to GP:9949956; identified by sequence similarity NP_745477.1 similar to GP:9946290, and GP:9946290; identified by sequence similarity NP_745478.1 similar to GB:M86697, PID:150672, GB:M86697, and PID:150672; identified by sequence similarity NP_745480.1 identified by match to PFAM protein family HMM PF00593 NP_745481.1 Inhibits transcription at high concentrations of nickel NP_745482.1 similar to GB:L01694, SP:Q03113, PID:182994, GB:L01694, SP:Q03113, and PID:182994; identified by sequence similarity NP_745483.1 with NikACDE is involved in nickel transport into the cell NP_745484.1 with NikABDE is involved in nickel transport into the cell NP_745485.1 with NikABCE is involved in nickel transport into the cell NP_745486.1 with NikABCD is involved with nickel transport into the cell NP_745488.1 identified by match to PFAM protein family HMM PF00990 NP_745489.1 similar to GP:3097809, and SP:P77589; identified by sequence similarity NP_745492.1 similar to SP:P51691, GB:Z32517, GB:U03505, and PID:488752; identified by sequence similarity NP_745493.1 similar to GB:X04968, PID:42405, GB:X04968, and PID:42405; identified by sequence similarity NP_745494.1 identified by match to PFAM protein family HMM PF00441 NP_745495.1 similar to GP:6273623, and GP:6273623; identified by sequence similarity NP_745496.1 catalyzes the conversion of ferulic acid to feruloyl-CoA NP_745497.1 similar to GP:3116018, GB:D17462, SP:P43438, and PID:487281; identified by sequence similarity NP_745498.1 catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA NP_745499.1 similar to GP:6740921, and GP:6740921; identified by sequence similarity NP_745500.1 similar to GB:U00006, SP:P02408, GB:V00339, PID:396324, PID:42816, GB:U00096, PID:1790417, GB:U00006, SP:P02408, GB:V00339, PID:396324, PID:42816, GB:U00096, and PID:1790417; identified by sequence similarity NP_745501.1 similar to GP:7294449; identified by sequence similarity NP_745502.1 similar to GP:6224605; identified by sequence similarity NP_745503.1 similar to SP:P23030, GB:X54523, and PID:45524; identified by sequence similarity NP_745504.1 similar to GP:6521382; identified by sequence similarity NP_745505.1 catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis NP_745506.1 identified by match to PFAM protein family HMM PF03466 NP_745507.1 similar to GP:7379781; identified by sequence similarity NP_745508.1 similar to GP:4808411; identified by sequence similarity NP_745509.1 similar to GP:6498264, and GP:9947058; identified by sequence similarity NP_745510.1 similar to GP:6468420; identified by sequence similarity NP_745511.1 identified by match to PFAM protein family HMM PF02518 NP_745512.1 similar to GB:M17783, SP:P07093, PID:183064, PID:412157, GB:L34155, SP:Q16787, PID:1149513, and PID:551597; identified by sequence similarity NP_745513.1 identified by match to PFAM protein family HMM PF01103 NP_745515.1 similar to GB:M28826, GB:M22168, GB:M22169, GB:M22170, GB:M22171, GB:M22172, GB:M22173, GB:M14665, SP:P29016, PID:180050, PID:180056, and PID:180064; identified by sequence similarity NP_745516.1 similar to SP:P37666; identified by sequence similarity NP_745517.1 identified by match to TIGR protein family HMM TIGR00881 NP_745518.1 similar to GP:9948289, GP:9948289, GB:X74614, SP:Q14990, and PID:474426; identified by sequence similarity NP_745520.1 similar to GP:3282331; identified by sequence similarity NP_745521.1 similar to GP:6723233; identified by sequence similarity NP_745522.1 similar to GP:5532314; identified by sequence similarity NP_745523.1 similar to GP:2584862, and GP:2584862; identified by sequence similarity NP_745524.1 identified by match to TIGR protein family HMM TIGR01409 NP_745526.1 similar to GP:2920640; identified by sequence similarity NP_745528.1 identified by match to PFAM protein family HMM PF04211 NP_745530.1 similar to GP:3253207; identified by sequence similarity NP_745531.1 similar to GB:L34058, SP:P55290, PID:1381790, PID:1381792, and PID:506408; identified by sequence similarity NP_745532.1 similar to GB:J00124, GB:X59475, GB:M28646, SP:P02533, and PID:386848; identified by sequence similarity NP_745533.1 identified by match to PFAM protein family HMM PF02515 NP_745534.1 similar to GP:3426048, GB:M63959, GB:U06976, SP:P30533, PID:1235526, PID:177874, and PID:463882; identified by sequence similarity NP_745535.1 identified by match to PFAM protein family HMM PF03466 NP_745538.1 similar to GB:Z34974, GB:X79293, PID:1770488, PID:535015, PID:550115, SP:Q04222, and PID:141982; identified by sequence similarity NP_745539.1 similar to GP:6759911, GB:J05175, SP:P16442, PID:1783208, PID:1783212, PID:1783214, PID:1783218, PID:1783226, PID:2352626, PID:340078, and PID:992596; identified by sequence similarity NP_745542.1 similar to GP:9948463, and GP:9948463; identified by sequence similarity NP_745543.1 identified by match to PFAM protein family HMM PF00561 NP_745544.1 similar to GP:9948339; identified by sequence similarity NP_745545.1 identified by match to TIGR protein family HMM TIGR01575 NP_745547.1 similar to GB:M60484, GB:X12656, GB:J03805, SP:P05323, SP:P11082, PID:178438, PID:190226, and PID:35581; identified by sequence similarity NP_745548.1 similar to GB:M16237, GB:M16243, GB:M16244, GB:M16245, GB:K03212, GB:K03213, GB:K03214, GB:K03215, GB:K03216, GB:K03217, GB:K03218, GB:X04000, GB:X03996, GB:X03998, GB:X03995, GB:X02647, GB:X03999, GB:X03997, SP:P12931, PID:1848077, and PID:338460; identified by sequence similarity NP_745549.1 similar to GP:9947837, and GP:9947837; identified by sequence similarity NP_745550.1 similar to GB:M28825, GB:M22080, GB:M22163, GB:M22164, GB:M22165, GB:M22166, GB:M22167, GB:X79309, GB:X79308, GB:M27735, GB:M14663, SP:P06126, PID:180046, and PID:530884; identified by sequence similarity NP_745551.1 similar to GB:L07555, GB:Z30426, GB:Z30430, GB:Z30427, GB:Z30429, GB:Z30428, SP:Q07108, PID:291898, PID:397939, and PID:558352; identified by sequence similarity NP_745552.1 similar to GB:Z15114, SP:P05129, and PID:35497; identified by sequence similarity NP_745553.1 identified by match to PFAM protein family HMM PF00356 NP_745554.1 identified by match to TIGR protein family HMM TIGR00041 NP_745555.1 similar to SP:Q9Z670; identified by sequence similarity NP_745556.1 similar to GP:9800237; identified by sequence similarity NP_745557.1 similar to GB:X06182, GB:S68472, GB:X65959, GB:X69301, GB:X69302, GB:X69303, GB:X69304, GB:X69305, GB:X69306, GB:X69307, GB:X69308, GB:X69309, GB:X69310, GB:X69311, GB:X69312, GB:X69313, GB:X69314, GB:X69315, GB:X69316, GB:X72595, GB:X72599, SP:P10721, PID:34087, and PID:825686; identified by sequence similarity NP_745558.1 similar to GB:L10393, SP:P08048, SP:P17010, and PID:340436; identified by sequence similarity NP_745559.1 identified by match to PFAM protein family HMM PF00512 NP_745560.1 similar to GP:4680732, and GP:4680732; identified by sequence similarity NP_745561.1 similar to GP:4680731, and GP:4680731; identified by sequence similarity NP_745562.1 similar to GP:4680733, and GP:17430616; identified by sequence similarity NP_745563.1 similar to GB:X73158, and PID:506943; identified by sequence similarity NP_745564.1 similar to GB:X73158, and PID:506943; identified by sequence similarity NP_745565.1 similar to GB:X16050, SP:P12986, and PID:48339; identified by sequence similarity NP_745566.1 identified by match to PFAM protein family HMM PF00515 NP_745567.1 similar to GP:5052340; identified by sequence similarity NP_745568.1 similar to GP:4376185; identified by sequence similarity NP_745569.1 identified by match to TIGR protein family HMM TIGR01382 NP_745570.1 similar to GP:9950000; identified by sequence similarity NP_745571.1 similar to GB:M34065, SP:P30307, PID:180176, GB:M34065, SP:P30307, and PID:180176; identified by sequence similarity NP_745573.1 identified by match to PFAM protein family HMM PF00563 NP_745574.1 similar to SP:P27844; identified by sequence similarity NP_745575.1 identified by match to PFAM protein family HMM PF04290 NP_745576.1 identified by match to PFAM protein family HMM PF01810 NP_745577.1 similar to GP:7619749; identified by sequence similarity NP_745581.1 identified by match to TIGR protein family HMM TIGR01722 NP_745582.1 identified by match to PFAM protein family HMM PF00903 NP_745584.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway NP_745585.1 similar to GP:5230850, and GP:9948836; identified by sequence similarity NP_745586.1 similar to GB:M11717, GB:M24743, SP:P08107, PID:188488, PID:188490, PID:188530, PID:32481, PID:32483, PID:386785, PID:639910, GB:M11717, GB:M24743, SP:P08107, PID:188488, PID:188490, PID:188530, PID:32481, PID:32483, PID:386785, and PID:639910; identified by sequence similarity NP_745589.1 similar to SP:P28787, GB:X68129, PID:45902, SP:P28787, GB:X68129, and PID:45902; identified by sequence similarity NP_745590.1 similar to GB:U09422, and PID:532545; identified by sequence similarity NP_745591.1 similar to GB:M57730, GB:D17034, SP:P20827, and PID:179321; identified by sequence similarity NP_745592.1 similar to GB:X16453, SP:P13367, and PID:581343; identified by sequence similarity NP_745593.1 identified by match to TIGR protein family HMM TIGR01730 NP_745594.1 identified by match to PFAM protein family HMM PF00873 NP_745595.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis NP_745596.1 activates fatty acids by binding to coenzyme A NP_745599.1 identified by match to PFAM protein family HMM PF04055 NP_745601.1 identified by match to TIGR protein family HMM TIGR01722 NP_745604.1 similar to GB:D14037, and PID:436034; identified by sequence similarity NP_745605.1 identified by match to PFAM protein family HMM PF02954 NP_745609.1 similar to GB:X64058, SP:P28762, GB:X64058, and SP:P28762; identified by sequence similarity NP_745610.1 similar to SP:O54292, GB:X64058, and SP:P28762; identified by sequence similarity NP_745611.1 chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex NP_745613.1 similar to GP:5442041, and GP:17430939; identified by sequence similarity NP_745614.1 identified by match to TIGR protein family HMM TIGR01710 NP_745615.1 similar to GB:L27670, GB:L27671, GB:S78852, GB:S78853, PID:511641, and PID:511643; identified by sequence similarity NP_745620.1 similar to GB:U08434, and PID:487441; identified by sequence similarity NP_745621.1 identified by match to PFAM protein family HMM PF00072 NP_745622.1 similar to SP:P17161, GB:X03147, and PID:43926; identified by sequence similarity NP_745623.1 similar to GP:4704216; identified by sequence similarity NP_745624.1 identified by match to PFAM protein family HMM PF02630 NP_745625.1 identified by match to PFAM protein family HMM PF02630 NP_745626.1 identified by match to PFAM protein family HMM PF01087 NP_745627.1 similar to GB:M60922, PID:793910, GB:M60922, and PID:793910; identified by sequence similarity NP_745628.1 similar to GP:2228238, and GP:11138233; identified by sequence similarity NP_745629.1 similar to SP:P45857; identified by sequence similarity NP_745630.1 similar to GP:9945991; identified by sequence similarity NP_745632.1 similar to GP:1813343, and GP:10173995; identified by sequence similarity NP_745633.1 similar to GB:J03732, SP:P03813, PID:145322, PID:882733, PID:1128956, GB:U00096, PID:1789205, GB:J03732, SP:P03813, PID:145322, PID:882733, PID:1128956, GB:U00096, and PID:1789205; identified by sequence similarity NP_745634.1 similar to SP:P76104; identified by sequence similarity NP_745635.1 similar to GB:X66899, GB:X72990, GB:X72991, GB:X72992, GB:X72993, GB:X72994, GB:X72995, GB:X72996, GB:X72997, GB:X72998, GB:X72999, GB:X73000, GB:X73001, GB:X73002, GB:X73003, GB:X73004, SP:Q01844, PID:1572086, PID:1666068, PID:31280, and PID:825654; identified by sequence similarity NP_745636.1 similar to GP:2773259, and GP:2773259; identified by sequence similarity NP_745637.1 similar to GP:4928612, and GP:4928612; identified by sequence similarity NP_745638.1 similar to GP:3414883, and GP:6009427; identified by sequence similarity NP_745639.1 similar to GP:7741879; identified by sequence similarity NP_745640.1 identified by match to TIGR protein family HMM TIGR01199 NP_745641.1 similar to GP:9947840, and GP:9947840; identified by sequence similarity NP_745642.1 similar to GP:9949037; identified by sequence similarity NP_745643.1 similar to SP:P26239; identified by sequence similarity NP_745644.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism NP_745645.1 similar to SP:P29937; identified by sequence similarity NP_745646.1 identified by match to PFAM protein family HMM PF00903 NP_745648.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids NP_745649.1 similar to GP:9948970, and GP:9948970; identified by sequence similarity NP_745650.1 identified by match to PFAM protein family HMM PF03466 NP_745651.1 similar to GB:L04303, GB:L16991, SP:P23919, and PID:291900; identified by sequence similarity NP_745652.1 similar to GP:2665710, GB:J00269, GB:L42575, GB:L42576, GB:L42577, GB:L42578, GB:L42579, GB:L42580, GB:L42581, GB:L42582, GB:L42583, GB:J00269, GB:L42603, GB:L42604, GB:L42605, GB:L42606, GB:L42607, GB:L42608, GB:L42609, GB:L42610, GB:L42602, SP:P02538, SP:P04259, SP:P48666, SP:P48667, SP:P48668, SP:P48669, PID:1335192, PID:34069, PID:386847, PID:908779, PID:908790, PID:908801, PID:908803, PID:908805, and PID:914833; identified by sequence similarity NP_745653.1 similar to GP:8218179; identified by sequence similarity NP_745655.1 similar to GB:L10126, GB:L31848, SP:P36896, PID:338215, PID:555934, PID:576681, PID:576682, PID:576683, GB:L10126, GB:L31848, SP:P36896, PID:338215, PID:555934, PID:576681, PID:576682, and PID:576683; identified by sequence similarity NP_745657.1 similar to GP:9947023; identified by sequence similarity NP_745658.1 identified by match to PFAM protein family HMM PF00892 NP_745659.1 similar to GP:10175707, GB:M77142, and SP:P31483; identified by sequence similarity NP_745662.1 similar to GP:9950776, and GP:9950776; identified by sequence similarity NP_745663.1 identified by match to PFAM protein family HMM PF00165 NP_745664.1 identified by match to PFAM protein family HMM PF00440 NP_745665.1 similar to GP:3420605; identified by sequence similarity NP_745667.1 similar to GP:9947061, and GP:9947061; identified by sequence similarity NP_745668.1 similar to GP:9947542; identified by sequence similarity NP_745669.1 similar to GP:3128284; identified by sequence similarity NP_745670.1 catalyzes the formation of L-proline from L-ornithine NP_745671.1 identified by match to PFAM protein family HMM PF03466 NP_745672.1 similar to GB:X62083, GB:M80613, SP:P25440, PID:1370115, PID:182769, PID:2181873, PID:2181875, PID:31472, and PID:577293; identified by sequence similarity NP_745674.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate NP_745675.1 similar to GP:6682325, and GP:6682325; identified by sequence similarity NP_745676.1 identified by match to PFAM protein family HMM PF00376 NP_745677.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA NP_745678.1 similar to GP:5508829; identified by sequence similarity NP_745679.1 similar to GP:9948025, and GP:9948025; identified by sequence similarity NP_745680.1 similar to GB:X69699, SP:Q06710, PID:307321, and PID:553607; identified by sequence similarity NP_745681.1 identified by match to PFAM protein family HMM PF00392 NP_745682.1 similar to GP:4376185; identified by sequence similarity NP_745683.1 similar to GP:5052340; identified by sequence similarity NP_745684.1 identified by match to TIGR protein family HMM TIGR01500 NP_745685.1 similar to GB:M80629, and PID:180492; identified by sequence similarity NP_745686.1 identified by match to TIGR protein family HMM TIGR01730 NP_745687.1 identified by match to PFAM protein family HMM PF03551 NP_745688.1 identified by match to PFAM protein family HMM PF00072 NP_745689.1 identified by match to PFAM protein family HMM PF02518 NP_745690.1 activates fatty acids by binding to coenzyme A NP_745691.1 identified by match to PFAM protein family HMM PF00441 NP_745692.1 similar to GP:9948429; identified by sequence similarity NP_745693.1 identified by match to PFAM protein family HMM PF04172 NP_745694.1 identified by match to PFAM protein family HMM PF00672 NP_745695.1 identified by match to PFAM protein family HMM PF04069 NP_745696.1 identified by match to TIGR protein family HMM TIGR01183 NP_745697.1 identified by match to PFAM protein family HMM PF03466 NP_745698.1 similar to GP:9951798; identified by sequence similarity NP_745700.1 similar to GP:9947059, and GP:9947059; identified by sequence similarity NP_745701.1 similar to GP:9951713; identified by sequence similarity NP_745702.1 similar to SP:P27847; identified by sequence similarity NP_745703.1 identified by match to PFAM protein family HMM PF00083 NP_745704.1 similar to GP:3169721; identified by sequence similarity NP_745705.1 similar to GB:S73775, SP:P31415, GB:S73775, and SP:P31415; identified by sequence similarity NP_745706.1 similar to SP:Q9XD78; identified by sequence similarity NP_745707.1 similar to GB:M26683, GB:X60001, GB:S71513, GB:X14768, GB:M37719, GB:M24545, GB:M30816, GB:M31625, GB:M31626, GB:M28223, GB:M28224, GB:M28225, GB:M28226, GB:D26087, and SP:P13500; identified by sequence similarity NP_745708.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine NP_745709.1 identified by match to TIGR protein family HMM TIGR01662 NP_745710.1 identified by match to PFAM protein family HMM PF00070 NP_745711.1 similar to GB:U05875, GB:U05877, GB:X88209, SP:P38484, PID:1669506, PID:463550, and PID:463552; identified by sequence similarity NP_745712.1 identified by match to PFAM protein family HMM PF00593 NP_745713.1 similar to GB:L06139, SP:Q02763, and PID:292824; identified by sequence similarity NP_745714.1 identified by match to PFAM protein family HMM PF00776 NP_745715.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate NP_745716.1 similar to GB:L12006, SP:Q05596, PID:154435, GB:L12006, SP:Q05596, and PID:154435; identified by sequence similarity NP_745718.1 similar to GP:9947703; identified by sequence similarity NP_745719.1 identified by match to PFAM protein family HMM PF02321 NP_745720.1 identified by match to TIGR protein family HMM TIGR00915 NP_745721.1 identified by match to TIGR protein family HMM TIGR01730 NP_745722.1 similar to GP:6723233; identified by sequence similarity NP_745723.1 similar to SP:P57669; identified by sequence similarity NP_745724.1 similar to GP:474915; identified by sequence similarity NP_745725.1 similar to GB:X57766, SP:P24347, PID:456257, and PID:987949; identified by sequence similarity NP_745726.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate NP_745727.1 identified by match to PFAM protein family HMM PF02615 NP_745728.1 identified by match to PFAM protein family HMM PF01418 NP_745729.1 identified by match to PFAM protein family HMM PF00497 NP_745730.1 identified by match to TIGR protein family HMM TIGR01726 NP_745731.1 similar to GB:X52425, SP:P24394, and PID:33834; identified by sequence similarity NP_745732.1 identified by match to PFAM protein family HMM PF01266 NP_745733.1 similar to GP:2961079; identified by sequence similarity NP_745734.1 similar to SP:P76038; identified by sequence similarity NP_745735.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate NP_745736.1 similar to SP:P31457, GB:M11953, GB:L10120, GB:X61441, PID:2218035, PID:2275585, PID:292779, PID:338868, PID:37450, PID:553696, PID:553702, PID:975610, and PID:975611; identified by sequence similarity NP_745737.1 similar to GB:L07044, PID:975881, and PID:975883; identified by sequence similarity NP_745738.1 identified by match to TIGR protein family HMM TIGR01722 NP_745739.1 similar to GP:10174453; identified by sequence similarity NP_745741.1 identified by match to PFAM protein family HMM PF03466 NP_745742.1 identified by match to TIGR protein family HMM TIGR01751 NP_745743.1 identified by match to PFAM protein family HMM PF04143 NP_745744.1 identified by match to PFAM protein family HMM PF03466 NP_745748.1 similar to GP:5712714; identified by sequence similarity NP_745749.1 similar to GP:9948458, GB:U10362, and PID:505652; identified by sequence similarity NP_745750.1 identified by match to PFAM protein family HMM PF01127 NP_745756.1 identified by match to TIGR protein family HMM TIGR00702 NP_745757.1 similar to GB:U09367, SP:P52737, and PID:487785; identified by sequence similarity NP_745758.1 similar to GB:U09367, SP:P52737, and PID:487785; identified by sequence similarity NP_745759.1 similar to GB:J03464, GB:Y00724, GB:X55525, GB:X03892, GB:J00114, GB:K02568, GB:M21353, GB:M21671, GB:M28985, GB:K02046, GB:M22816, GB:S98904, GB:M64229, GB:M22817, GB:M35391, GB:M21189, GB:K01078, GB:M31886, GB:S41101, GB:S59218, GB:S59211, GB:V00503, GB:X02488, SP:P08123, PID:1418930, PID:179596, PID:179603, PID:179634, PID:180394, PID:180882, PID:189685, PID:190305, PID:2078468, PID:2388555, PID:30023, PID:30102, PID:553606, and PID:825646; identified by sequence similarity NP_745760.1 identified by match to TIGR protein family HMM TIGR01096 NP_745761.1 identified by match to PFAM protein family HMM PF01810 NP_745762.1 similar to GP:9949921; identified by sequence similarity NP_745764.1 similar to GP:4584486; identified by sequence similarity NP_745765.1 similar to GP:9948797, and GP:9948797; identified by sequence similarity NP_745766.1 similar to GP:2645844; identified by sequence similarity NP_745767.1 similar to GP:9950361; identified by sequence similarity NP_745768.1 similar to GP:6580639; identified by sequence similarity NP_745769.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis NP_745770.1 identified by match to PFAM protein family HMM PF00583 NP_745771.1 similar to GP:9948362, and GP:5823450; identified by sequence similarity NP_745772.1 similar to GP:5823449; identified by sequence similarity NP_745773.1 similar to GP:5823448; identified by sequence similarity NP_745774.1 similar to GP:5823447; identified by sequence similarity NP_745775.1 identified by match to TIGR protein family HMM TIGR00778 NP_745776.1 identified by match to PFAM protein family HMM PF00165 NP_745777.1 identified by match to PFAM protein family HMM PF02133 NP_745779.1 identified by match to PFAM protein family HMM PF01613 NP_745780.1 similar to SP:P24376, GB:X55648, and PID:43525; identified by sequence similarity NP_745781.1 similar to GP:2935027; identified by sequence similarity NP_745782.1 identified by match to TIGR protein family HMM TIGR01722 NP_745783.1 similar to GP:3059199; identified by sequence similarity NP_745784.1 identified by match to PFAM protein family HMM PF02627 NP_745785.1 similar to GB:M13923, SP:P06185, GB:X52093, and PID:154256; identified by sequence similarity NP_745786.1 identified by match to TIGR protein family HMM TIGR00586 NP_745787.1 identified by match to PFAM protein family HMM PF02518 NP_745788.1 similar to GB:M31308, SP:P15922, and PID:148447; identified by sequence similarity NP_745789.1 similar to GP:4585594; identified by sequence similarity NP_745790.1 similar to GP:3980226; identified by sequence similarity NP_745791.1 identified by match to PFAM protein family HMM PF04171 NP_745792.1 Appears to be in an operon of genes involved in the import and degradation of an aromatic compound.; identified by match to PFAM protein family HMM PF03573 NP_745793.1 similar to GP:9885815; identified by sequence similarity NP_745794.1 similar to GP:7542440; identified by sequence similarity NP_745795.1 identified by match to PFAM protein family HMM PF00165 NP_745796.1 similar to GB:X57351, GB:X02490, SP:Q01628, SP:Q01629, and PID:23396; identified by sequence similarity NP_745797.1 identified by match to PFAM protein family HMM PF03601 NP_745798.1 similar to GP:9950318; identified by sequence similarity NP_745799.1 similar to GB:X67697, SP:Q08648, and PID:395921; identified by sequence similarity NP_745800.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome NP_745801.1 identified by match to PFAM protein family HMM PF00165 NP_745802.1 similar to GP:9716209; identified by sequence similarity NP_745803.1 similar to GB:L08895, SP:Q06413, PID:292290, GB:L08895, SP:Q06413, and PID:292290; identified by sequence similarity NP_745804.1 similar to GP:12620402; identified by sequence similarity NP_745805.1 similar to GP:3646369; identified by sequence similarity NP_745806.1 identified by match to PFAM protein family HMM PF00892 NP_745807.1 identified by match to TIGR protein family HMM TIGR01293 NP_745808.1 similar to GP:14022500, SP:P24075, GB:X59956, and PID:48924; identified by sequence similarity NP_745812.1 identified by match to PFAM protein family HMM PF00589 NP_745814.1 identified by match to PFAM protein family HMM PF02463 NP_745815.1 identified by match to PFAM protein family HMM PF00580 NP_745822.1 similar to SP:Q05528, GB:X62073, PID:48986, SP:Q05528, GB:X62073, and PID:48986; identified by sequence similarity NP_745824.1 similar to SP:P17224, GB:X52284, PID:42514, SP:P22879, SP:P12834, PID:154521, and PID:48022; identified by sequence similarity NP_745830.1 identified by match to PFAM protein family HMM PF04097 NP_745832.1 identified by match to PFAM protein family HMM PF01118 NP_745839.1 similar to GP:7635977, and GP:6752313; identified by sequence similarity NP_745844.1 identified by match to PFAM protein family HMM PF00990 NP_745845.1 similar to GP:10173711, and GP:10173711; identified by sequence similarity NP_745846.1 similar to GB:D16827, SP:P35346, PID:431095, PID:487684, GB:D16827, SP:P35346, PID:431095, and PID:487684; identified by sequence similarity NP_745847.1 similar to GP:2647940, and GP:2647940; identified by sequence similarity NP_745848.1 similar to GP:1633162, and GP:1633162; identified by sequence similarity NP_745849.1 similar to GB:X06233, GB:M21064, GB:A12031, GB:A12029, SP:P06702, PID:34771, PID:386958, PID:490104, PID:490108, PID:516621, GB:X06233, GB:M21064, GB:A12031, GB:A12029, SP:P06702, PID:34771, PID:386958, PID:490104, PID:490108, and PID:516621; identified by sequence similarity NP_745850.1 identified by match to PFAM protein family HMM PF00196 NP_745851.1 similar to SP:P32724, GB:X58406, PID:581361, PID:2094830, and GB:AL123456; identified by sequence similarity NP_745852.1 similar to GP:9947357; identified by sequence similarity NP_745853.1 identified by match to PFAM protein family HMM PF02525 NP_745854.1 similar to GB:M31520, GB:U12202, SP:P16632, PID:337506, PID:517221, and PID:517222; identified by sequence similarity NP_745855.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer NP_745856.1 similar to GP:5514636; identified by sequence similarity NP_745857.1 identified by match to PFAM protein family HMM PF02770 NP_745858.1 identified by match to PFAM protein family HMM PF00378 NP_745859.1 identified by match to TIGR protein family HMM TIGR00913 NP_745860.1 similar to GP:9951266; identified by sequence similarity NP_745861.1 similar to GP:9950221; identified by sequence similarity NP_745862.1 similar to GP:9951267; identified by sequence similarity NP_745863.1 identified by match to PFAM protein family HMM PF00440 NP_745864.1 identified by match to PFAM protein family HMM PF00378 NP_745865.1 similar to GB:L24392, PID:402917, and SP:P52670; identified by sequence similarity NP_745866.1 similar to GP:5508818, and GP:5508818; identified by sequence similarity NP_745867.1 similar to GB:L24392, PID:402917, and SP:P52670; identified by sequence similarity NP_745868.1 similar to GP:2765429, and GB:X55141; identified by sequence similarity NP_745869.1 similar to SP:O54037, and SP:O54037; identified by sequence similarity NP_745870.1 similar to GP:6646872, and GP:6646872; identified by sequence similarity NP_745871.1 identified by match to TIGR protein family HMM TIGR00895 NP_745872.1 identified by match to PFAM protein family HMM PF00905 NP_745873.1 identified by match to PFAM protein family HMM PF02798 NP_745874.1 similar to GP:9951794; identified by sequence similarity NP_745875.1 similar to GB:X53463, SP:P18283, and PID:579930; identified by sequence similarity NP_745876.1 similar to SP:P32718, PID:396419, GB:U00096, and PID:1790522; identified by sequence similarity NP_745877.1 similar to SP:P52073, GB:X53463, SP:P18283, and PID:579930; identified by sequence similarity NP_745878.1 similar to SP:P52074, GB:X53463, SP:P18283, and PID:579930; identified by sequence similarity NP_745879.1 similar to GB:X75346, GB:U12779, SP:P49137, and PID:530090; identified by sequence similarity NP_745881.1 identified by match to PFAM protein family HMM PF00392 NP_745882.1 similar to GB:J03459, GB:J02959, SP:P09960, PID:307130, PID:307131, and PID:976396; identified by sequence similarity NP_745883.1 similar to GP:9948615; identified by sequence similarity NP_745884.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA NP_745885.1 similar to GP:10176425; identified by sequence similarity NP_745886.1 identified by match to PFAM protein family HMM PF00440 NP_745887.1 similar to GP:3758881, and GP:3758881; identified by sequence similarity NP_745888.1 similar to GP:5566398; identified by sequence similarity NP_745889.1 similar to GB:K02567, GB:M13792, GB:K00509, GB:X02199, GB:S57810, GB:X02189, GB:X02190, GB:X02191, GB:X02192, GB:X02193, GB:X02194, GB:X02195, GB:X02196, GB:X02197, GB:X02198, SP:P00813, PID:1197210, GB:K02567, GB:M13792, GB:K00509, GB:X02199, GB:S57810, GB:X02189, GB:X02190, GB:X02191, GB:X02192, GB:X02193, GB:X02194, GB:X02195, GB:X02196, GB:X02197, GB:X02198, SP:P00813, and PID:1197210; identified by sequence similarity NP_745890.1 similar to GB:J03459, GB:J02959, SP:P09960, PID:307130, PID:307131, PID:976396, GB:J03459, GB:J02959, SP:P09960, PID:307130, PID:307131, and PID:976396; identified by sequence similarity NP_745891.1 similar to GP:8246822; identified by sequence similarity NP_745892.1 similar to GP:7019233; identified by sequence similarity NP_745893.1 catalyzes the formation of precorrin 6x from precorrin 5 NP_745894.1 similar to GP:3253207; identified by sequence similarity NP_745896.1 similar to GB:Z14955, GB:Z14954, GB:Z29574, GB:Z29575, SP:Q02223, PID:1930146, PID:29408, PID:33807, PID:471245, and PID:499189; identified by sequence similarity NP_745897.1 similar to GP:9949033, and GP:9949033; identified by sequence similarity NP_745898.2 catalyzes the conversion of shikimate to 3-dehydroshikimate NP_745902.1 identified by match to PFAM protein family HMM PF00717 NP_745905.1 similar to GP:217024, and SP:P40854; identified by sequence similarity NP_745906.1 similar to GP:6960247, and SP:P27844; identified by sequence similarity NP_745907.1 similar to GP:6468417; identified by sequence similarity NP_745908.1 similar to SP:P22008; identified by sequence similarity NP_745909.1 similar to GP:882732; identified by sequence similarity NP_745911.1 similar to GB:X04106, SP:P04632, PID:179909, PID:1905903, and PID:35328; identified by sequence similarity NP_745912.1 identified by match to PFAM protein family HMM PF00550 NP_745913.1 similar to GP:5748808, GB:U09069, PID:483880, PID:563395, PID:563401, PID:563407, PID:563409, PID:563420, PID:563432, PID:563436, PID:563440, PID:563442, PID:609461, and PID:836630; identified by sequence similarity NP_745914.1 similar to GP:2624947; identified by sequence similarity NP_745916.1 similar to GB:X79782, SP:P01701, SP:P06316, SP:P06888, PID:473562, PID:497342, PID:497381, PID:506429, PID:507343, PID:517347, PID:553499, PID:575231, PID:587368, PID:619436, PID:619437, and PID:758087; identified by sequence similarity NP_745917.1 identified by match to TIGR protein family HMM TIGR00747 NP_745918.1 similar to SP:O30409, and GP:3510629; identified by sequence similarity NP_745919.1 similar to GP:10175834, and GP:9947140; identified by sequence similarity NP_745920.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate NP_745921.1 identified by match to PFAM protein family HMM PF00589 NP_745922.1 similar to GP:9187576; identified by sequence similarity NP_745923.1 similar to GP:5059119; identified by sequence similarity NP_745924.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7 NP_745926.1 similar to GP:9948427, GB:X15144, SP:P26998, and PID:1340162; identified by sequence similarity NP_745927.1 identified by match to PFAM protein family HMM PF03929 NP_745931.1 identified by match to PFAM protein family HMM PF01297 NP_745932.1 identified by match to PFAM protein family HMM PF00005 NP_745933.1 identified by match to PFAM protein family HMM PF00950 NP_745934.1 identified by match to PFAM protein family HMM PF01297 NP_745935.1 identified by match to PFAM protein family HMM PF02167 NP_745936.1 identified by match to PFAM protein family HMM PF00857 NP_745937.1 identified by match to TIGR protein family HMM TIGR01738 NP_745938.1 similar to GP:9948456; identified by sequence similarity NP_745941.1 similar to GP:9947128; identified by sequence similarity NP_745943.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis NP_745944.1 similar to GP:6689865; identified by sequence similarity NP_745945.1 similar to GB:X14967, SP:P15008, PID:43551, and PID:2425181; identified by sequence similarity NP_745946.1 similar to GB:X14967, SP:P15008, PID:43551, and PID:2425181; identified by sequence similarity NP_745947.1 identified by match to TIGR protein family HMM TIGR01187 NP_745948.1 identified by match to PFAM protein family HMM PF01449 NP_745949.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense NP_745950.1 similar to GB:L01112, SP:P45375, PID:145016, and PID:1247706; identified by sequence similarity NP_745951.1 identified by match to TIGR protein family HMM TIGR01099 NP_745952.1 identified by match to PFAM protein family HMM PF00034 NP_745953.1 identified by match to PFAM protein family HMM PF00034 NP_745957.1 similar to GP:9950413; identified by sequence similarity NP_745958.1 identified by match to TIGR protein family HMM TIGR01256 NP_745959.1 similar to GB:L07738, GB:Z19603, SP:Q06432, PID:306473, and PID:450530; identified by sequence similarity NP_745960.1 similar to GP:9947850; identified by sequence similarity NP_745961.1 identified by match to PFAM protein family HMM PF01028 NP_745962.1 affects carbohydrate metabolism; has regulatory role in many processes NP_745963.1 similar to GP:3236110; identified by sequence similarity NP_745964.1 identified by match to TIGR protein family HMM TIGR01189 NP_745965.1 identified by match to PFAM protein family HMM PF02518 NP_745967.1 similar to SP:P25919, and PID:152706; identified by sequence similarity NP_745969.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs NP_745971.1 similar to GP:1841790; identified by sequence similarity NP_745972.1 identified by match to TIGR protein family HMM TIGR01746 NP_745974.1 identified by match to PFAM protein family HMM PF03576 NP_745975.1 identified by match to PFAM protein family HMM PF01547 NP_745976.1 similar to GP:9949754; identified by sequence similarity NP_745977.1 identified by match to PFAM protein family HMM PF00196 NP_745979.1 similar to GB:U12789, SP:P54868, PID:555833, and PID:619877; identified by sequence similarity NP_745984.1 similar to GP:8895133, SP:P37750, GB:U03041, GB:U09876, PID:508245, and PID:510256; identified by sequence similarity NP_745988.1 similar to GP:9309376; identified by sequence similarity NP_745989.1 similar to SP:Q9T1V1, and SP:P09947; identified by sequence similarity NP_745990.1 similar to SP:P44240, GB:L10972, and PID:425440; identified by sequence similarity NP_745991.1 similar to SP:Q9T1V3, SP:Q9T1V3, and SP:P44239; identified by sequence similarity NP_745992.1 similar to SP:Q9T1V4; identified by sequence similarity NP_745993.1 similar to SP:P22183, GB:M35034, GB:X55034, PID:147817, PID:40847, GB:U00096, PID:1786267, SP:P22183, GB:M35034, GB:X55034, PID:147817, PID:40847, GB:U00096, and PID:1786267; identified by sequence similarity NP_745994.1 similar to PIR:A64127, and SP:P71389; identified by sequence similarity NP_745995.1 similar to GP:15212238; identified by sequence similarity NP_745996.1 similar to GP:2852350; identified by sequence similarity NP_745997.1 similar to GB:L10971, GB:L10971, PID:425438, GB:L10971, GB:L10971, and PID:425438; identified by sequence similarity NP_745998.1 similar to GB:L01112, SP:P45375, PID:145016, and PID:1247706; identified by sequence similarity NP_745999.1 similar to GB:Z23169, PID:313353, GB:L10971, GB:L10971, PID:425438, GB:L10971, GB:L10971, and PID:425438; identified by sequence similarity NP_746000.1 similar to GP:1834290, and SP:P44232; identified by sequence similarity NP_746003.1 identified by match to TIGR protein family HMM TIGR01725 NP_746004.1 identified by match to TIGR protein family HMM TIGR01563 NP_746007.1 identified by match to TIGR protein family HMM TIGR01554 NP_746008.1 similar to GP:6723229, and GP:6723247; identified by sequence similarity NP_746009.1 similar to GP:6739661, SP:P17058, PID:46001, and PID:46126; identified by sequence similarity NP_746011.1 similar to GP:3128374, and GP:6739656; identified by sequence similarity NP_746012.1 similar to GP:6066822; identified by sequence similarity NP_746013.1 similar to GP:6901612, GB:L24552, SP:P41102, and PID:404082; identified by sequence similarity NP_746014.1 similar to GP:6066815, GB:L04569, GB:M57971, GB:Z34811, GB:Z34812, GB:Z34821, GB:Z34822, GB:Z34809, GB:Z34810, GB:Z34813, GB:Z34814, GB:Z34815, GB:Z34816, GB:Z34817, GB:Z34818, GB:Z34819, GB:Z34820, GB:M57972, GB:M91370, GB:Z26294, GB:Z26295, PID:291895, PID:501073, PID:508183, PID:508185, PID:508187, PID:508189, PID:508191, PID:508193, PID:508195, PID:508197, PID:508199, PID:508201, PID:509048, PID:509068, PID:509168, PID:509178, PID:509341, and PID:509344; identified by sequence similarity NP_746019.1 similar to GB:M15502, SP:P07954, PID:1545996, and PID:182794; identified by sequence similarity NP_746021.1 similar to GP:6901638, and GP:6901638; identified by sequence similarity NP_746023.1 identified by match to TIGR protein family HMM TIGR00665 NP_746024.1 similar to GP:8895171, SP:Q02103, GB:X63438, and PID:40785; identified by sequence similarity NP_746025.1 similar to GB:D14539, GB:L04285, SP:Q03111, PID:182110, and PID:436042; identified by sequence similarity NP_746026.1 identified by match to PFAM protein family HMM PF01381 NP_746028.1 similar to SP:P45567; identified by sequence similarity NP_746029.1 similar to GP:3603326, and GP:3603326; identified by sequence similarity NP_746030.1 similar to GP:3603325, and GP:3603325; identified by sequence similarity NP_746035.1 identified by match to PFAM protein family HMM PF00196 NP_746042.1 similar to GP:9106848; identified by sequence similarity NP_746050.1 similar to GP:9107449; identified by sequence similarity NP_746052.1 SohB; periplasmic protein; member of the peptidase S49 family NP_746053.1 identified by match to TIGR protein family HMM TIGR00249 NP_746054.1 identified by match to PFAM protein family HMM PF02036 NP_746055.1 similar to GP:9947815; identified by sequence similarity NP_746056.1 identified by match to PFAM protein family HMM PF00106 NP_746058.1 similar to SP:P76426, SP:P18021, SP:P06615, GB:X04967, PID:144169, and PID:147038; identified by sequence similarity NP_746061.1 identified by match to PFAM protein family HMM PF03600 NP_746062.1 similar to GP:9105918, SP:P37828, and PID:901847; identified by sequence similarity NP_746063.1 similar to GP:6759580, and GP:6759580; identified by sequence similarity NP_746064.1 identified by match to PFAM protein family HMM PF03466 NP_746069.1 similar to GP:7542442, and GP:3253207; identified by sequence similarity NP_746070.1 identified by match to TIGR protein family HMM TIGR00893 NP_746071.1 similar to GB:X12671, GB:X79536, GB:X04347, GB:U00947, PID:296650, PID:36102, PID:37610, PID:496898, GB:X12671, GB:X79536, GB:X04347, GB:U00947, PID:296650, PID:36102, PID:37610, and PID:496898; identified by sequence similarity NP_746072.1 similar to GP:8570038, and GP:8570038; identified by sequence similarity NP_746073.1 similar to GP:9082330; identified by sequence similarity NP_746074.1 similar to GP:2271503, GB:D13318, GB:U13044, GB:X84366, SP:Q06546, PID:286027, and PID:531893; identified by sequence similarity NP_746075.1 similar to GB:L18881, GB:Z35446, GB:Z35447, GB:Z35448, GB:Z35450, GB:Z35454, SP:P48633, PID:408802, PID:516461, PID:516463, PID:516465, PID:516467, PID:516469, GB:L18881, GB:Z35446, GB:Z35447, GB:Z35448, GB:Z35450, GB:Z35454, SP:P48633, PID:408802, PID:516461, PID:516463, PID:516465, PID:516467, and PID:516469; identified by sequence similarity NP_746076.1 similar to GP:9947568; identified by sequence similarity NP_746077.1 similar to GB:U09367, SP:P52737, and PID:487785; identified by sequence similarity NP_746078.1 identified by match to PFAM protein family HMM PF00034 NP_746079.1 identified by match to PFAM protein family HMM PF00440 NP_746080.1 identified by match to PFAM protein family HMM PF00672 NP_746081.1 similar to SP:Q01103, GB:X17405, SP:P10915, PID:1151009, and PID:34378; identified by sequence similarity NP_746082.1 similar to SP:Q01104, GB:M82962, SP:Q16819, and PID:535475; identified by sequence similarity NP_746083.1 identified by match to PFAM protein family HMM PF03631 NP_746084.1 identified by match to TIGR protein family HMM TIGR01728 NP_746085.1 similar to GP:9951883; identified by sequence similarity NP_746086.1 similar to GP:9951882, and GP:9951882; identified by sequence similarity NP_746087.1 identified by match to PFAM protein family HMM PF02028 NP_746088.1 similar to GB:M57506, GB:M57502, SP:P22362, PID:184506, and PID:339729; identified by sequence similarity NP_746089.1 identified by match to PFAM protein family HMM PF00654 NP_746090.1 identified by match to PFAM protein family HMM PF00440 NP_746091.1 similar to GP:9438231; identified by sequence similarity NP_746092.1 similar to GP:4105683; identified by sequence similarity NP_746093.1 similar to GP:1742048; identified by sequence similarity NP_746094.1 similar to GP:3414883, and GP:6009427; identified by sequence similarity NP_746095.1 similar to GP:4928612, and GP:6009406; identified by sequence similarity NP_746096.1 similar to GP:2773259, and GP:2773259; identified by sequence similarity NP_746097.1 similar to GB:Z22595, PID:435521, and SP:P52090; identified by sequence similarity NP_746098.1 similar to GP:5566398; identified by sequence similarity NP_746099.1 similar to GP:9622952; identified by sequence similarity NP_746100.1 similar to GB:S45627, GB:S45629, GB:S45636, GB:S45637, GB:S45639, GB:S45640, GB:S45635, GB:M16594, GB:X65726, GB:X65727, GB:X65728, GB:X65729, GB:X65730, GB:X65731, GB:X65732, SP:P08263, SP:P09210, PID:306811, PID:825605, PID:825606, SP:P07176, PID:41360, PID:42257, GB:U00096, PID:1651333, and PID:1786962; identified by sequence similarity NP_746102.1 similar to SP:P80046, and PID:1478267; identified by sequence similarity NP_746104.1 similar to GP:6498264; identified by sequence similarity NP_746105.1 similar to GP:7636027, and GP:7636027; identified by sequence similarity NP_746106.1 identified by match to PFAM protein family HMM PF00857 NP_746109.1 similar to GP:2773259, and GP:2773259; identified by sequence similarity NP_746110.1 similar to GP:4928612; identified by sequence similarity NP_746111.1 similar to GP:3414883, and GP:6009427; identified by sequence similarity NP_746112.1 identified by match to PFAM protein family HMM PF00005 NP_746114.1 similar to SP:P12059, GB:X52093, SP:P12059, and GB:X52093; identified by sequence similarity NP_746115.1 similar to GP:5824139, and GP:8037785; identified by sequence similarity NP_746116.1 similar to GP:5824138, and GP:8037784; identified by sequence similarity NP_746117.1 similar to GP:9107449; identified by sequence similarity NP_746118.1 identified by match to PFAM protein family HMM PF02518 NP_746119.1 similar to GB:M62420, GB:J04056, GB:X88010, SP:P16152, PID:179978, and PID:181037; identified by sequence similarity NP_746120.1 identified by match to PFAM protein family HMM PF04178 NP_746122.1 identified by match to TIGR protein family HMM TIGR00801 NP_746123.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs NP_746124.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs NP_746125.1 identified by match to PFAM protein family HMM PF04077 NP_746126.1 similar to GP:9948673; identified by sequence similarity NP_746127.1 similar to GB:J05556, SP:P22894, and PID:180618; identified by sequence similarity NP_746128.1 identified by match to PFAM protein family HMM PF00043 NP_746129.1 similar to GB:X51730, GB:M15716, SP:P06401, PID:189935, and PID:35652; identified by sequence similarity NP_746130.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_746131.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling NP_746132.1 similar to GP:9948679; identified by sequence similarity NP_746133.1 participates with LolB in the incorporation of lipoprotein into the outer membrane NP_746134.1 similar to GP:4063380, GB:L07807, GB:L07810, GB:L07808, GB:L07809, SP:Q05193, PID:181849, and PID:181851; identified by sequence similarity NP_746135.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys NP_746136.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate NP_746137.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 NP_746138.1 similar to GB:J03490, SP:P09622, PID:1339989, PID:181575, and PID:307137; identified by sequence similarity NP_746139.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA NP_746140.1 identified by match to PFAM protein family HMM PF00313 NP_746141.1 identified by match to TIGR protein family HMM TIGR00183 NP_746142.1 identified by match to PFAM protein family HMM PF03971 NP_746143.1 similar to SP:P27506, and PID:43908; identified by sequence similarity NP_746144.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs NP_746145.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis NP_746146.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide NP_746148.1 identified by match to PFAM protein family HMM PF00583 NP_746149.1 decatenates replicating daughter chromosomes NP_746150.1 similar to GP:9951625; identified by sequence similarity NP_746151.1 similar to GB:U07989, SP:P01596, SP:P01602, SP:P01604, SP:P01834, PID:1335148, PID:1619960, PID:185945, PID:185947, PID:185949, PID:468243, PID:470602, PID:470608, PID:470612, PID:561696, PID:561705, PID:563650, PID:619427, PID:619601, PID:619602, PID:619613, PID:619615, PID:619616, PID:632988, PID:642582, PID:663000, PID:663001, PID:722576, PID:758085, PID:762937, PID:790811, PID:860994, PID:896278, GB:U07989, SP:P01596, SP:P01602, SP:P01604, SP:P01834, PID:1335148, PID:1619960, PID:185945, PID:185947, PID:185949, PID:468243, PID:470602, PID:470608, PID:470612, PID:561696, PID:561705, PID:563650, PID:619427, PID:619601, PID:619602, PID:619613, PID:619615, PID:619616, PID:632988, PID:642582, PID:663000, PID:663001, PID:722576, PID:758085, PID:762937, PID:790811, PID:860994, and PID:896278; identified by sequence similarity NP_746153.1 similar to GP:5824138, and GP:8572709; identified by sequence similarity NP_746154.1 similar to GP:8037785, and GP:8037785; identified by sequence similarity NP_746157.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates NP_746158.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA NP_746159.1 involved in regulation of intracellular pH under alkaline conditions NP_746161.1 similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity NP_746162.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide NP_746163.1 identified by match to PFAM protein family HMM PF03596 NP_746164.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain NP_746165.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines NP_746166.1 similar to GP:2565356; identified by sequence similarity NP_746167.1 similar to GP:6117873, and GP:6117873; identified by sequence similarity NP_746168.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate NP_746169.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate NP_746175.1 similar to GP:2920640; identified by sequence similarity NP_746176.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose NP_746177.1 identified by match to PFAM protein family HMM PF02922 NP_746178.1 similar to GB:X12597, GB:L13805, SP:P09429, PID:1435197, PID:32327, and PID:968888; identified by sequence similarity NP_746179.1 identified by match to PFAM protein family HMM PF00128 NP_746181.1 identified by match to PFAM protein family HMM PF02922 NP_746182.1 identified by match to PFAM protein family HMM PF03372 NP_746183.1 identified by match to TIGR protein family HMM TIGR01414 NP_746184.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain NP_746185.1 similar to GP:1536814; identified by sequence similarity NP_746186.1 identified by match to PFAM protein family HMM PF00128 NP_746189.1 activates fatty acids by binding to coenzyme A NP_746190.1 similar to SP:P18812; identified by sequence similarity NP_746191.1 similar to GP:10934059; identified by sequence similarity NP_746192.1 catalyzes the hydration of gamma-carboxygeranoyl-CoA to 3-hydroxy-gamma-carboxygeranoyl-CoA NP_746193.1 identified by match to TIGR protein family HMM TIGR00514 NP_746194.1 similar to GP:1469215; identified by sequence similarity NP_746199.1 similar to GP:9657505; identified by sequence similarity NP_746204.1 similar to GP:9657500; identified by sequence similarity NP_746207.1 similar to GP:2920641; identified by sequence similarity NP_746209.1 similar to GP:2920634; identified by sequence similarity NP_746212.1 similar to GP:8037785, and GP:8037785; identified by sequence similarity NP_746213.1 similar to GP:5824138, and GP:8572709; identified by sequence similarity NP_746214.1 similar to SP:P23761, PID:296728, PID:58350, SP:P23761, PID:296728, and PID:58350; identified by sequence similarity NP_746215.1 similar to GP:8247754, SP:P25897, GB:D10986, and PID:217130; identified by sequence similarity NP_746216.1 similar to GP:9946890; identified by sequence similarity NP_746217.1 similar to SP:P06978; identified by sequence similarity NP_746218.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision NP_746219.1 similar to GP:3142729, GB:X51405, SP:P16870, and PID:29667; identified by sequence similarity NP_746220.1 similar to SP:P21232, GB:M36726, SP:P21232, and GB:M36726; identified by sequence similarity NP_746221.1 identified by match to PFAM protein family HMM PF00583 NP_746223.1 identified by match to PFAM protein family HMM PF01384 NP_746224.1 similar to GB:M64983, GB:J00129, GB:M26877, GB:M26876, GB:J00131, GB:J00130, SP:P02675, PID:182430, PID:182435, PID:31401, PID:484509, PID:532595, GB:M64983, GB:J00129, GB:M26877, GB:M26876, GB:J00131, GB:J00130, SP:P02675, PID:182430, PID:182435, PID:31401, PID:484509, PID:532595, GB:M64983, GB:J00129, GB:M26877, GB:M26876, GB:J00131, GB:J00130, SP:P02675, PID:182430, PID:182435, PID:31401, PID:484509, PID:532595, GB:M64983, GB:J00129, GB:M26877, GB:M26876, GB:J00131, GB:J00130, SP:P02675, PID:182430, PID:182435, PID:31401, PID:484509, and PID:532595; identified by sequence similarity NP_746225.1 similar to GP:2815353, and GP:2815353; identified by sequence similarity NP_746226.1 identified by match to PFAM protein family HMM PF00324 NP_746227.1 identified by match to PFAM protein family HMM PF03466 NP_746228.1 identified by match to TIGR protein family HMM TIGR00700 NP_746231.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene NP_746232.1 identified by match to PFAM protein family HMM PF00082 NP_746234.1 similar to GP:9948700; identified by sequence similarity NP_746235.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates NP_746237.1 similar to GP:9658122; identified by sequence similarity NP_746238.1 Catalyzes the transfer of electrons from NADH to quinone NP_746239.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen NP_746240.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms NP_746241.1 Catalyzes the transfer of electrons from NADH to quinone NP_746242.1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase NP_746243.1 Catalyzes the transfer of electrons from NADH to quinone NP_746244.1 Catalyzes the transfer of electrons from NADH to quinone NP_746245.1 Catalyzes the transfer of electrons from NADH to quinone NP_746246.1 Catalyzes the transfer of electrons from NADH to quinone NP_746247.1 Catalyzes the transfer of electrons from NADH to quinone NP_746248.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_746249.1 Catalyzes the transfer of electrons from NADH to quinone NP_746250.1 Catalyzes the transfer of electrons from NADH to quinone NP_746251.1 similar to GP:4063808, and GP:4063808; identified by sequence similarity NP_746252.1 similar to GP:14804; identified by sequence similarity NP_746253.1 similar to GP:4063781, and GP:4063781; identified by sequence similarity NP_746255.1 similar to GB:M19961, GB:M59250, SP:P10606, PID:1679628, PID:180937, and PID:180941; identified by sequence similarity NP_746256.1 similar to GP:3925407, SP:P00960, GB:J01622, PID:146222, PID:146225, PID:466698, GB:U00096, and PID:1789983; identified by sequence similarity NP_746257.1 identified by match to PFAM protein family HMM PF03358 NP_746259.1 3'-5' exonuclease of DNA polymerase III NP_746260.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids NP_746261.1 similar to GP:9947799; identified by sequence similarity NP_746262.1 similar to GB:M88458, SP:P33947, and PID:31218; identified by sequence similarity NP_746263.1 identified by match to PFAM protein family HMM PF01464 NP_746264.1 identified by match to PFAM protein family HMM PF00496 NP_746265.1 identified by match to PFAM protein family HMM PF00496 NP_746266.1 identified by match to PFAM protein family HMM PF03626 NP_746267.1 identified by match to TIGR protein family HMM TIGR01726 NP_746268.1 identified by match to TIGR protein family HMM TIGR01727 NP_746269.1 similar to GP:3378297; identified by sequence similarity NP_746270.1 similar to GP:3378296, and GP:3378296; identified by sequence similarity NP_746272.1 similar to GP:6403506; identified by sequence similarity NP_746273.1 similar to GP:6946683; identified by sequence similarity NP_746274.1 identified by match to PFAM protein family HMM PF03466 NP_746275.1 similar to GP:9947605; identified by sequence similarity NP_746276.1 similar to GP:9947604, and GP:9947604; identified by sequence similarity NP_746277.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex NP_746278.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions NP_746279.1 similar to GP:9947592; identified by sequence similarity NP_746280.1 similar to GP:9947591; identified by sequence similarity NP_746281.1 identified by match to TIGR protein family HMM TIGR01738 NP_746282.1 identified by match to TIGR protein family HMM TIGR01738 NP_746284.1 identified by match to TIGR protein family HMM TIGR00249 NP_746285.1 similar to GP:9947581, and GP:9947581; identified by sequence similarity NP_746286.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate NP_746288.1 similar to GP:9947579; identified by sequence similarity NP_746290.1 identified by match to PFAM protein family HMM PF02518 NP_746291.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP NP_746292.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP NP_746293.1 similar to GP:9845030; identified by sequence similarity NP_746294.1 similar to GP:4521959; identified by sequence similarity NP_746295.1 similar to GB:M14949, GB:M14948, SP:P10301, and PID:190936; identified by sequence similarity NP_746296.1 molecular chaperone NP_746297.1 identified by match to TIGR protein family HMM TIGR00369 NP_746298.1 identified by match to TIGR protein family HMM TIGR00369 NP_746299.1 identified by match to PFAM protein family HMM PF01925 NP_746300.1 similar to GP:9947555, and GP:9947555; identified by sequence similarity NP_746301.1 identified by match to PFAM protein family HMM PF04138 NP_746302.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle NP_746303.1 catalyzes the interconversion of succinyl-CoA and succinate NP_746304.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide NP_746305.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA NP_746306.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide NP_746307.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase NP_746308.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol NP_746309.1 similar to GB:Z11585, and PID:29936; identified by sequence similarity NP_746310.1 similar to GB:X63597, GB:M22616, SP:P14410, PID:338090, and PID:36645; identified by sequence similarity NP_746311.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH NP_746312.1 similar to SP:P58040; identified by sequence similarity NP_746313.1 similar to GP:9948985; identified by sequence similarity NP_746314.1 similar to GP:9948989; identified by sequence similarity NP_746315.1 identified by match to PFAM protein family HMM PF00691 NP_746316.1 similar to GP:9948993; identified by sequence similarity NP_746317.1 similar to GP:9948994; identified by sequence similarity NP_746318.1 similar to SP:P38974; identified by sequence similarity NP_746319.1 similar to GB:D90359, GB:M73442, GB:M73444, GB:X07024, SP:P21675, and PID:29733; identified by sequence similarity NP_746320.1 identified by match to PFAM protein family HMM PF03545 NP_746321.1 similar to GP:4186112; identified by sequence similarity NP_746322.1 similar to GP:4186111, and GP:4186111; identified by sequence similarity NP_746323.1 identified by match to TIGR protein family HMM TIGR00883 NP_746325.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas aeruginosa this extracytoplasmic function sigma factor may be involved in the transcription of the ferric pyoverdine receptor gene, fpvA. NP_746326.1 similar to GP:10764643; identified by sequence similarity NP_746327.1 identified by match to TIGR protein family HMM TIGR01740 NP_746328.1 identified by match to PFAM protein family HMM PF02321 NP_746329.1 identified by match to TIGR protein family HMM TIGR01409 NP_746330.1 identified by match to PFAM protein family HMM PF01244 NP_746331.1 identified by match to TIGR protein family HMM TIGR01409 NP_746332.1 identified by match to PFAM protein family HMM PF03781 NP_746333.1 similar to GB:X06325, SP:P09002, and PID:1333690; identified by sequence similarity NP_746334.1 similar to GB:M29874, GB:M29873, SP:P20813, and PID:181294; identified by sequence similarity NP_746335.1 similar to GB:U08997, GB:X66310, GB:X53144, GB:X53147, SP:P00367, SP:P49448, PID:31815, PID:478988, and PID:579924; identified by sequence similarity NP_746336.1 identified by match to TIGR protein family HMM TIGR01734 NP_746337.1 similar to GP:9948469; identified by sequence similarity NP_746338.1 identified by match to TIGR protein family HMM TIGR01734 NP_746339.1 similar to GB:L09228, SP:P35154, PID:410131, and GB:AL009126; identified by sequence similarity NP_746340.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde NP_746341.1 similar to GP:8885860, and GP:8885860; identified by sequence similarity NP_746342.1 similar to GP:8885859, and GP:8885859; identified by sequence similarity NP_746347.1 similar to GP:6273649; identified by sequence similarity NP_746348.1 identified by match to PFAM protein family HMM PF02625 NP_746349.1 similar to GB:J03464, GB:Y00724, GB:X55525, GB:X03892, GB:J00114, GB:K02568, GB:M21353, GB:M21671, GB:M28985, GB:K02046, GB:M22816, GB:S98904, GB:M64229, GB:M22817, GB:M35391, GB:M21189, GB:K01078, GB:M31886, GB:S41101, GB:S59218, GB:S59211, GB:V00503, GB:X02488, SP:P08123, PID:1418930, PID:179596, PID:179603, PID:179634, PID:180394, PID:180882, PID:189685, PID:190305, PID:2078468, PID:2388555, PID:30023, PID:30102, PID:553606, and PID:825646; identified by sequence similarity NP_746350.1 similar to GP:2463458; identified by sequence similarity NP_746351.1 identified by match to PFAM protein family HMM PF03772 NP_746352.1 similar to GB:J03810, SP:P11168, and PID:307125; identified by sequence similarity NP_746353.1 Involved in disulfide bond formation NP_746356.1 similar to GB:J03930, GB:M15694, GB:M19161, GB:Y00512, GB:M31008, SP:P05187, SP:P05188, SP:P06861, SP:P09923, SP:P10696, PID:178432, PID:178442, PID:178446, PID:296631, PID:553176, PID:553177, GB:J03930, GB:M15694, GB:M19161, GB:Y00512, GB:M31008, SP:P05187, SP:P05188, SP:P06861, SP:P09923, SP:P10696, PID:178432, PID:178442, PID:178446, PID:296631, PID:553176, and PID:553177; identified by sequence similarity NP_746359.1 catalyzes the specific recognition and activation of amino acids during peptide synthesis; involved in the biosynthesis of the peptide chain of pyoverdines NP_746360.1 RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease NP_746361.1 similar to GP:5738527, and SP:Q9Z3Q9; identified by sequence similarity NP_746362.1 identified by match to PFAM protein family HMM PF03466 NP_746363.1 identified by match to PFAM protein family HMM PF00929 NP_746365.1 similar to GP:9947519; identified by sequence similarity NP_746366.1 CcoN; FixN NP_746367.1 CcoO; FixO NP_746369.1 identified by match to TIGR protein family HMM TIGR00782 NP_746371.1 CcoN; FixN NP_746372.1 CcoO; FixO NP_746373.1 similar to GB:L24376, SP:P37870, PID:402363, and GB:AL009126; identified by sequence similarity NP_746374.1 identified by match to TIGR protein family HMM TIGR00782 NP_746375.1 identified by match to PFAM protein family HMM PF00037 NP_746377.1 similar to GP:9947509, GB:S70527, GB:L37374, SP:P39748, GB:X76771, and PID:642090; identified by sequence similarity NP_746378.1 identified by match to PFAM protein family HMM PF03597 NP_746379.1 similar to GP:9947507; identified by sequence similarity NP_746380.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_746381.1 similar to GP:3220199, GB:J05200, GB:S78717, GB:M91455, GB:S77392, SP:P21817, PID:1216475, PID:337722, PID:553643, and PID:579583; identified by sequence similarity NP_746382.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis NP_746383.1 involved in a recombinational process of DNA repair, independent of the recBC complex NP_746384.1 identified by match to PFAM protein family HMM PF02575 NP_746385.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA NP_746386.1 identified by match to PFAM protein family HMM PF00497 NP_746389.1 identified by match to PFAM protein family HMM PF00376 NP_746390.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB NP_746391.1 interacts directly with the cell division protein ftsZ; probable receptor for the septal ring structure, may anchor it to the inner-membrane NP_746392.1 identified by match to PFAM protein family HMM PF02483 NP_746393.1 identified by match to PFAM protein family HMM PF00392 NP_746394.1 similar to GP:2956674; identified by sequence similarity NP_746395.1 identified by match to PFAM protein family HMM PF01315 NP_746396.1 similar to GP:4741723; identified by sequence similarity NP_746397.1 Catalyzes the deamination of guanine NP_746398.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure NP_746399.1 identified by match to PFAM protein family HMM PF00392 NP_746400.1 identified by match to PFAM protein family HMM PF04144 NP_746402.1 identified by match to PFAM protein family HMM PF01522 NP_746404.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate NP_746405.1 similar to GP:9947470; identified by sequence similarity NP_746406.1 identified by match to TIGR protein family HMM TIGR00801 NP_746407.1 similar to GP:13937484; identified by sequence similarity NP_746409.1 similar to GP:13937484; identified by sequence similarity NP_746410.1 identified by match to PFAM protein family HMM PF01810 NP_746411.1 identified by match to PFAM protein family HMM PF00440 NP_746412.1 identified by match to PFAM protein family HMM PF03928 NP_746413.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate NP_746414.1 similar to GB:J03799, GB:X15005, GB:S37431, GB:M14199, GB:X61156, GB:U36484, SP:P08865, PID:1125065, PID:34272, and PID:386857; identified by sequence similarity NP_746415.1 similar to SP:P23523; identified by sequence similarity NP_746416.1 similar to GB:L34058, SP:P55290, PID:1381790, PID:1381792, PID:506408, GB:L34058, SP:P55290, PID:1381790, PID:1381792, and PID:506408; identified by sequence similarity NP_746417.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_746418.1 identified by match to PFAM protein family HMM PF04186 NP_746419.1 similar to GP:1070029, and GP:2950328; identified by sequence similarity NP_746420.1 identified by match to PFAM protein family HMM PF00914 NP_746421.1 similar to SP:P06997; identified by sequence similarity NP_746422.1 identified by match to PFAM protein family HMM PF03602 NP_746423.1 identified by match to PFAM protein family HMM PF00892 NP_746424.1 similar to GP:9948639; identified by sequence similarity NP_746425.1 identified by match to TIGR protein family HMM TIGR00800 NP_746426.1 similar to GB:X03833, GB:X02851, GB:M15329, GB:X56086, SP:P01583, PID:186278, PID:186280, PID:33786, PID:33795, PID:35661, PID:755744, GB:X03833, GB:X02851, GB:M15329, GB:X56086, SP:P01583, PID:186278, PID:186280, PID:33786, PID:33795, PID:35661, and PID:755744; identified by sequence similarity NP_746427.1 similar to GB:X12534, SP:P10114, PID:35861, and PID:412184; identified by sequence similarity NP_746428.1 similar to GP:624074, and GP:624074; identified by sequence similarity NP_746429.1 identified by match to PFAM protein family HMM PF00254 NP_746430.1 similar to GP:15156320, GB:M28819, SP:P18784, PID:145869, PID:882534, GB:U00096, and PID:1789380; identified by sequence similarity NP_746431.1 identified by match to PFAM protein family HMM PF02567 NP_746432.1 Involved in the metabolism of aromatic amino acids NP_746434.1 identified by match to PFAM protein family HMM PF01609 NP_746436.1 similar to GB:U09073, GB:U09074, PID:483888, PID:483890, PID:483904, GB:J03810, SP:P11168, and PID:307125; identified by sequence similarity NP_746437.1 identified by match to TIGR protein family HMM TIGR00353 NP_746438.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane NP_746439.1 similar to GB:M28880, GB:X16609, GB:X16609, SP:P16157, GB:S82671, PID:1845219, PID:747710, GB:U07992, SP:P01842, PID:1335156, PID:1335158, PID:1335174, PID:186127, PID:2114277, PID:2114297, PID:2114299, PID:33700, PID:386814, PID:468249, PID:553491, and PID:871288; identified by sequence similarity NP_746440.1 similar to GP:4107341; identified by sequence similarity NP_746441.1 identified by match to TIGR protein family HMM TIGR01190 NP_746442.1 ATP-binding protein; required for proper cytochrome c maturation NP_746443.1 identified by match to PFAM protein family HMM PF02120 NP_746444.1 identified by match to TIGR protein family HMM TIGR00789 NP_746445.1 similar to GP:433689; identified by sequence similarity NP_746447.1 similar to GP:2853606, and GP:2853606; identified by sequence similarity NP_746448.1 similar to GP:2853605; identified by sequence similarity NP_746449.2 similar to GP:2853604, GB:M25108, SP:P05106, and PID:386833; identified by sequence similarity NP_746450.1 Homologous to MotB. These organism have both MotB and MotD. With MotC (a MotA homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. Either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility NP_746451.1 homologous to MotA; this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; these organisms have both MotA and MotC NP_746452.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins NP_746453.1 similar to GP:2853600, and GP:2853600; identified by sequence similarity NP_746454.1 similar to GP:2853599, and GP:2853599; identified by sequence similarity NP_746455.1 similar to GP:2853598, and GP:2853598; identified by sequence similarity NP_746456.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes NP_746457.1 similar to GP:6692581; identified by sequence similarity NP_746458.1 positive regulator of class III flagellar genes NP_746459.1 membrane protein involved in the flagellar export apparatus NP_746460.1 identified by match to PFAM protein family HMM PF00392 NP_746461.1 identified by match to PFAM protein family HMM PF01820 NP_746462.1 identified by match to PFAM protein family HMM PF04055 NP_746463.1 similar to SP:Q07703; identified by sequence similarity NP_746465.1 similar to GP:7297897; identified by sequence similarity NP_746466.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export NP_746467.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus NP_746468.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus NP_746469.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus NP_746470.1 similar to GP:5921672, and GP:5921672; identified by sequence similarity NP_746471.1 One of three proteins involved in switching the direction of the flagellar rotation NP_746472.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation NP_746473.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring NP_746475.1 similar to GP:5921668, and GP:5921668; identified by sequence similarity NP_746476.1 identified by match to PFAM protein family HMM PF01627 NP_746477.1 similar to GP:5921667; identified by sequence similarity NP_746478.1 identified by match to TIGR protein family HMM TIGR00377 NP_746479.1 rod/hook and filament chaperone NP_746480.2 involved in type III protein export during flagellum assembly NP_746481.1 binds to and inhibits the function of flagella specific ATPase FliI NP_746482.2 One of three proteins involved in switching the direction of the flagellar rotation NP_746483.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod NP_746484.1 forms a junction between the M-ring and FlgB during flagella biosynthesis NP_746485.1 identified by match to PFAM protein family HMM PF00072 NP_746486.1 similar to GP:12056607, GB:U09065, PID:483872, PID:553456, PID:553461, PID:553463, PID:553468, PID:619426, and PID:976315; identified by sequence similarity NP_746487.1 identified by match to PFAM protein family HMM PF02954 NP_746488.1 similar to GP:12056605, GB:X63561, PID:1220484, PID:56080, and PID:56093; identified by sequence similarity NP_746489.1 flagellin specific chaperone NP_746490.1 similar to GP:7081488, GB:U14003, SP:P39280, PID:536990, GB:U00096, and PID:1790589; identified by sequence similarity NP_746491.1 similar to GB:M32101, SP:P16701, PID:145659, GB:U00096, PID:1788764, PID:1799843, PID:1799853, GB:M32101, SP:P16701, PID:145659, GB:U00096, PID:1788764, PID:1799843, and PID:1799853; identified by sequence similarity NP_746492.1 similar to GB:M19888, GB:M21300, GB:M21301, SP:P22528, SP:P35321, PID:338417, PID:338421, PID:338434, GB:M19888, GB:M21300, GB:M21301, SP:P22528, SP:P35321, PID:338417, PID:338421, and PID:338434; identified by sequence similarity NP_746493.1 similar to GP:10175505, SP:P28155, PID:48733, and PID:536810; identified by sequence similarity NP_746494.1 With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook NP_746495.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook NP_746496.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space NP_746497.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum NP_746498.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod NP_746499.1 makes up the distal portion of the flagellar basal body rod NP_746500.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod NP_746502.1 the hook connects flagellar basal body to the flagellar filament NP_746503.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production NP_746504.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod NP_746505.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella NP_746506.1 similar to GB:X68505, GB:X68505, GB:X63381, GB:X63381, SP:Q02078, SP:Q02080, PID:1197538, PID:34536, and PID:432656; identified by sequence similarity NP_746507.1 identified by match to PFAM protein family HMM PF01584 NP_746508.1 required for the assembly of the flagellar basal body P-ring NP_746509.1 similar to GB:X72755, SP:Q07325, and PID:311376; identified by sequence similarity NP_746511.1 similar to GP:9949486; identified by sequence similarity NP_746512.1 identified by match to PFAM protein family HMM PF00083 NP_746513.1 similar to GB:L04656, SP:P35219, and PID:179938; identified by sequence similarity NP_746514.1 similar to GB:J04173, SP:P18669, PID:551174, GB:J04173, SP:P18669, and PID:551174; identified by sequence similarity NP_746515.1 similar to SP:P09060, and SP:P09060; identified by sequence similarity NP_746516.1 similar to GP:790515; identified by sequence similarity NP_746517.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA NP_746518.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide NP_746519.1 identified by match to PFAM protein family HMM PF00990 NP_746521.1 similar to GP:969027; identified by sequence similarity NP_746522.1 identified by match to PFAM protein family HMM PF00589 NP_746527.1 identified by match to PFAM protein family HMM PF00589 NP_746532.1 identified by match to PFAM protein family HMM PF04218 NP_746533.1 identified by match to PFAM protein family HMM PF00665 NP_746534.1 similar to SP:P32724, GB:X58406, PID:581361, PID:2094830, and GB:AL123456; identified by sequence similarity NP_746535.1 similar to GB:D11466, GB:D28788, GB:X77725, GB:D28787, GB:D28789, GB:D28790, GB:D28791, SP:P37287, PID:1132481, and PID:219994; identified by sequence similarity NP_746536.1 similar to GP:15140294; identified by sequence similarity NP_746537.1 similar to SP:P03062, and GB:X52093; identified by sequence similarity NP_746538.1 similar to SP:P03062, GB:X52093, SP:P03062, and GB:X52093; identified by sequence similarity NP_746539.1 similar to SP:P03062, and GB:X52093; identified by sequence similarity NP_746540.1 similar to SP:P03062, and GB:X52093; identified by sequence similarity NP_746541.1 similar to GP:6689161, SP:P03062, and GB:X52093; identified by sequence similarity NP_746542.1 similar to GP:9948113; identified by sequence similarity NP_746543.1 catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization NP_746544.1 cyclodeaminase NP_746545.1 similar to GP:10174357; identified by sequence similarity NP_746546.1 similar to GP:9716209; identified by sequence similarity NP_746547.1 catalyzes the oxidative deamination of D-amino acids NP_746548.1 identified by match to PFAM protein family HMM PF01042 NP_746549.1 similar to GP:2773259, and GP:2773259; identified by sequence similarity NP_746550.1 similar to GP:4928612; identified by sequence similarity NP_746551.1 similar to GP:3414883, and GP:6009427; identified by sequence similarity NP_746552.1 identified by match to PFAM protein family HMM PF01527 NP_746553.1 similar to GP:4928612, and GP:13926136; identified by sequence similarity NP_746554.1 similar to GP:3414883, and GP:3414883; identified by sequence similarity NP_746555.1 similar to GP:11139520; identified by sequence similarity NP_746556.1 similar to GP:11139521, and SP:P05822; identified by sequence similarity NP_746557.1 similar to GP:2688957; identified by sequence similarity NP_746559.1 similar to GB:Z27502, GB:Z29983, SP:P04438, PID:1335182, PID:32878, PID:474960, PID:505435, PID:563647, GB:Z27502, GB:Z29983, SP:P04438, PID:1335182, PID:32878, PID:474960, PID:505435, and PID:563647; identified by sequence similarity NP_746560.1 similar to GP:4928013; identified by sequence similarity NP_746561.1 similar to GB:L20469, GB:L35902, GB:L35903, GB:U25441, GB:U32499, SP:P35462, PID:579579, PID:806903, and PID:927342; identified by sequence similarity NP_746563.1 similar to GP:6498362, GB:L31573, SP:P51687, and PID:508502; identified by sequence similarity NP_746564.1 similar to GP:2665715; identified by sequence similarity NP_746565.1 similar to GP:2665714, and GP:2665714; identified by sequence similarity NP_746566.1 similar to GP:2665713; identified by sequence similarity NP_746567.1 similar to GP:6498364; identified by sequence similarity NP_746568.1 similar to GP:6498366; identified by sequence similarity NP_746569.1 similar to GP:2665716, and GP:2665716; identified by sequence similarity NP_746570.1 similar to GP:5824150, and GP:5824150; identified by sequence similarity NP_746571.1 similar to GB:J02984, GB:M32405, SP:P11174, PID:306898, and PID:337416; identified by sequence similarity NP_746572.1 identified by match to TIGR protein family HMM TIGR00883 NP_746573.1 similar to GP:13094205; identified by sequence similarity NP_746574.1 similar to GP:3513356; identified by sequence similarity NP_746575.1 similar to GB:J02984, GB:M32405, SP:P11174, PID:306898, and PID:337416; identified by sequence similarity NP_746576.1 similar to GP:3253207; identified by sequence similarity NP_746577.1 similar to SP:P10088; identified by sequence similarity NP_746578.1 similar to GP:6498174; identified by sequence similarity NP_746579.1 identified by match to PFAM protein family HMM PF01381 NP_746580.1 similar to GB:M22538, SP:P19404, PID:1311466, and PID:188852; identified by sequence similarity NP_746581.1 identified by match to PFAM protein family HMM PF03869 NP_746582.1 identified by match to TIGR protein family HMM TIGR00400 NP_746583.1 affects carbohydrate metabolism; has regulatory role in many processes NP_746584.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. NP_746585.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_746586.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism NP_746587.1 similar to GP:2656128; identified by sequence similarity NP_746588.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation NP_746589.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH NP_746592.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate NP_746593.1 similar to GB:M28829, PID:551976, GB:M28829, and PID:551976; identified by sequence similarity NP_746594.1 similar to GB:L14430, SP:Q07131, PID:292874, and PID:881394; identified by sequence similarity NP_746595.1 similar to GP:2668597, GB:M59807, SP:P24001, and PID:189226; identified by sequence similarity NP_746596.1 similar to GB:M81188, SP:P00449, GB:M81914, PID:143203, PID:143552, and PID:143555; identified by sequence similarity NP_746597.1 similar to GB:M81188, SP:P00449, GB:M81914, PID:143203, PID:143552, and PID:143555; identified by sequence similarity NP_746598.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA NP_746600.1 similar to GB:X79146, and PID:487694; identified by sequence similarity NP_746601.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin NP_746602.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction NP_746603.1 similar to GB:M23575, GB:L36606, GB:M28234, GB:M28235, GB:M34420, SP:P11462, SP:P11463, SP:P11464, PID:180235, PID:190649, PID:306801, PID:306802, PID:493743, PID:553625, PID:553627, PID:603453, PID:808015, and PID:904281; identified by sequence similarity NP_746604.1 similar to GP:9887339; identified by sequence similarity NP_746605.1 similar to GP:9887337; identified by sequence similarity NP_746606.1 similar to SP:P15993; identified by sequence similarity NP_746607.1 identified by match to PFAM protein family HMM PF04079 NP_746608.1 identified by match to PFAM protein family HMM PF02616 NP_746609.1 identified by match to TIGR protein family HMM TIGR00057 NP_746610.1 identified by match to PFAM protein family HMM PF02231 NP_746611.1 Involved in cell division; probably involved in intracellular septation NP_746612.2 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity NP_746613.1 identified by match to PFAM protein family HMM PF00072 NP_746615.1 similar to GP:9949326; identified by sequence similarity NP_746616.1 identified by match to PFAM protein family HMM PF00881 NP_746617.1 identified by match to PFAM protein family HMM PF04247 NP_746618.1 identified by match to PFAM protein family HMM PF00165 NP_746620.1 identified by match to PFAM protein family HMM PF00149 NP_746621.1 identified by match to PFAM protein family HMM PF00165 NP_746622.1 identified by match to PFAM protein family HMM PF00892 NP_746624.1 identified by match to PFAM protein family HMM PF01734 NP_746625.1 identified by match to PFAM protein family HMM PF03551 NP_746626.1 similar to SP:P15043; identified by sequence similarity NP_746627.1 identified by match to PFAM protein family HMM PF03695 NP_746628.1 identified by match to PFAM protein family HMM PF04304 NP_746629.1 similar to GB:X12387, SP:P05184, SP:P08684, SP:P20815, PID:181354, PID:181372, PID:181374, PID:219963, PID:35911, and PID:510086; identified by sequence similarity NP_746630.1 identified by match to PFAM protein family HMM PF03942 NP_746631.1 similar to GP:9947522; identified by sequence similarity NP_746632.1 similar to GP:9947370; identified by sequence similarity NP_746633.1 similar to SP:P37819; identified by sequence similarity NP_746634.1 identified by match to PFAM protein family HMM PF04279 NP_746635.1 similar to GP:9947361; identified by sequence similarity NP_746636.1 identified by match to PFAM protein family HMM PF04306 NP_746637.1 identified by match to PFAM protein family HMM PF00892 NP_746638.1 similar to GP:9949398; identified by sequence similarity NP_746640.1 similar to GP:15073547, GB:D28124, SP:P41271, and PID:641822; identified by sequence similarity NP_746641.1 identified by match to PFAM protein family HMM PF03701 NP_746642.1 identified by match to PFAM protein family HMM PF00271 NP_746643.1 identified by match to PFAM protein family HMM PF00924 NP_746645.1 similar to GP:5738271; identified by sequence similarity NP_746646.1 identified by match to TIGR protein family HMM TIGR00950 NP_746647.1 similar to SP:P41407; identified by sequence similarity NP_746648.1 identified by match to PFAM protein family HMM PF03466 NP_746649.1 identified by match to TIGR protein family HMM TIGR01738 NP_746650.1 identified by match to PFAM protein family HMM PF00160 NP_746651.1 identified by match to PFAM protein family HMM PF00005 NP_746654.1 catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs NP_746655.1 similar to GP:9949425, and SP:P43329; identified by sequence similarity NP_746656.1 similar to SP:P28787, GB:X68129, and PID:45902; identified by sequence similarity NP_746657.1 similar to GB:X65867, GB:S60710, SP:P30566, PID:28904, and PID:28905; identified by sequence similarity NP_746658.1 activates fatty acids by binding to coenzyme A; involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids NP_746659.1 Disruption of the fadD2 gene did not have any effect on the catabolism of acetic, butyric and longer fatty acids (aliphatic or aromatic); however, might be involved in the specific activation of other fatty acids and may be functional when FadD1 is inactivated. NP_746660.1 identified by match to TIGR protein family HMM TIGR01738 NP_746661.1 identified by match to PFAM protein family HMM PF01575 NP_746663.1 similar to GP:10173309, and GP:15141407; identified by sequence similarity NP_746665.1 similar to GP:14523362; identified by sequence similarity NP_746667.1 identified by match to PFAM protein family HMM PF00583 NP_746668.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) NP_746669.1 identified by match to PFAM protein family HMM PF03631 NP_746674.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol NP_746675.1 identified by match to PFAM protein family HMM PF04279 NP_746677.1 identified by match to PFAM protein family HMM PF04093 NP_746680.1 similar to SP:P11096; identified by sequence similarity NP_746681.1 similar to GP:9948783; identified by sequence similarity NP_746682.1 identified by match to PFAM protein family HMM PF00004 NP_746684.1 identified by match to PFAM protein family HMM PF02626 NP_746685.1 identified by match to TIGR protein family HMM TIGR00370 NP_746686.1 identified by match to PFAM protein family HMM PF03746 NP_746687.1 identified by match to TIGR protein family HMM TIGR00895 NP_746688.1 similar to GB:X02751, GB:L00043, GB:X53291, GB:X53292, GB:X05564, GB:X05565, GB:L00040, GB:L00041, GB:L00042, GB:M10055, GB:K03211, GB:M25898, GB:S68580, GB:X07440, GB:X61282, GB:X00645, SP:P01111, SP:P01112, PID:1335234, PID:1335235, PID:1335236, PID:1335287, PID:190927, PID:190938, PID:35092, PID:35103, PID:465130, PID:553520, PID:553633, PID:553635, PID:553638, PID:825697, and PID:929658; identified by sequence similarity NP_746692.1 similar to GP:9947241, GB:J03589, GB:M35604, SP:P11441, PID:1203975, PID:340070, GB:J03589, GB:M35604, SP:P11441, PID:1203975, and PID:340070; identified by sequence similarity NP_746693.1 similar to GB:M88282, SP:P40200, PID:338672, GB:M88282, SP:P40200, and PID:338672; identified by sequence similarity NP_746694.1 identified by match to PFAM protein family HMM PF00588 NP_746697.1 similar to GP:10241924; identified by sequence similarity NP_746698.1 identified by match to PFAM protein family HMM PF02826 NP_746700.1 similar to GB:L07518, and PID:292046; identified by sequence similarity NP_746701.1 identified by match to PFAM protein family HMM PF02418 NP_746702.1 similar to SP:P06695, GB:Z00027, PID:43722, PID:43725, SP:P06695, GB:Z00027, PID:43722, and PID:43725; identified by sequence similarity NP_746703.1 similar to GP:2641242; identified by sequence similarity NP_746704.1 identified by match to PFAM protein family HMM PF01037 NP_746705.1 similar to SP:P07658; identified by sequence similarity NP_746706.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z NP_746707.1 similar to SP:P32109, GB:U15124, PID:563996, SP:P32109, GB:U15124, and PID:563996; identified by sequence similarity NP_746708.1 similar to GP:7741879; identified by sequence similarity NP_746709.1 similar to SP:P30746; identified by sequence similarity NP_746710.1 identified by match to PFAM protein family HMM PF03466 NP_746711.1 identified by match to PFAM protein family HMM PF00165 NP_746712.1 similar to GP:6723233; identified by sequence similarity NP_746713.1 identified by match to PFAM protein family HMM PF04103 NP_746714.1 identified by match to PFAM protein family HMM PF00165 NP_746715.1 identified by match to PFAM protein family HMM PF00593 NP_746717.1 identified by match to PFAM protein family HMM PF00140 NP_746719.1 identified by match to PFAM protein family HMM PF03977 NP_746720.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas aeruginosa this protein may be involved in ferric dicitrate uptake NP_746721.1 similar to GB:L06139, SP:Q02763, and PID:292824; identified by sequence similarity NP_746722.1 similar to GB:Z24721, PID:1147590, PID:394739, and PID:404251; identified by sequence similarity NP_746726.1 similar to SP:P13154; identified by sequence similarity NP_746728.1 identified by match to TIGR protein family HMM TIGR01262 NP_746729.1 identified by match to TIGR protein family HMM TIGR01266 NP_746730.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine NP_746731.1 identified by match to PFAM protein family HMM PF01614 NP_746733.1 identified by match to TIGR protein family HMM TIGR01738 NP_746734.1 identified by match to PFAM protein family HMM PF04172 NP_746735.1 identified by match to PFAM protein family HMM PF03788 NP_746736.1 identified by match to PFAM protein family HMM PF03466 NP_746737.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group NP_746738.1 similar to GB:L40411, SP:Q15652, and PID:703116; identified by sequence similarity NP_746739.1 identified by match to PFAM protein family HMM PF00376 NP_746741.1 identified by match to PFAM protein family HMM PF00106 NP_746743.1 identified by match to PFAM protein family HMM PF00561 NP_746744.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity NP_746745.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation NP_746746.1 identified by match to TIGR protein family HMM TIGR01371 NP_746747.1 identified by match to PFAM protein family HMM PF02219 NP_746748.1 identified by match to PFAM protein family HMM PF02492 NP_746750.1 similar to GP:7741957; identified by sequence similarity NP_746752.1 similar to SP:Q46821; identified by sequence similarity NP_746753.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents NP_746754.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock NP_746755.1 similar to SP:P28861; identified by sequence similarity NP_746756.1 identified by match to PFAM protein family HMM PF03472 NP_746757.1 identified by match to PFAM protein family HMM PF03602 NP_746759.1 similar to GB:M86697, and PID:150672; identified by sequence similarity NP_746760.1 similar to GB:M86697, PID:150672, GB:M86697, and PID:150672; identified by sequence similarity NP_746761.1 similar to GP:9950874; identified by sequence similarity NP_746762.1 similar to GP:6624219, GB:X66403, SP:Q04844, and PID:560153; identified by sequence similarity NP_746763.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs NP_746764.1 similar to SP:P00436, GB:M33317, SP:P11509, SP:P20853, PID:181270, and PID:825700; identified by sequence similarity NP_746765.1 similar to SP:P00437, GB:M30496, SP:P15374, and PID:340074; identified by sequence similarity NP_746766.1 similar to GP:9950976, and GP:9950976; identified by sequence similarity NP_746767.1 identified by match to PFAM protein family HMM PF03586 NP_746768.1 similar to GB:X62083, GB:M80613, SP:P25440, PID:1370115, PID:182769, PID:2181873, PID:2181875, PID:31472, and PID:577293; identified by sequence similarity NP_746769.1 similar to GP:9947848; identified by sequence similarity NP_746770.1 identified by match to PFAM protein family HMM PF02525 NP_746771.1 similar to GB:M69197, GB:X00442, GB:L29394, GB:K01763, GB:X00637, GB:X01793, GB:X01786, GB:X02206, GB:X01789, GB:X01791, GB:X00606, GB:M13908, GB:K00422, GB:M12387, GB:M10935, SP:P00737, SP:P00738, PID:1212947, PID:306880, PID:758071, GB:M69197, GB:X00442, GB:L29394, GB:K01763, GB:X00637, GB:X01793, GB:X01786, GB:X02206, GB:X01789, GB:X01791, GB:X00606, GB:M13908, GB:K00422, GB:M12387, GB:M10935, SP:P00737, SP:P00738, PID:1212947, PID:306880, and PID:758071; identified by sequence similarity NP_746773.1 similar to GP:3419687; identified by sequence similarity NP_746775.1 similar to GB:X16396, SP:P13995, and PID:35071; identified by sequence similarity NP_746776.1 similar to GP:7160985, and SP:P28810; identified by sequence similarity NP_746777.1 similar to GP:9948295; identified by sequence similarity NP_746778.1 identified by match to PFAM protein family HMM PF00691 NP_746779.1 identified by match to PFAM protein family HMM PF00990 NP_746781.1 similar to GB:J02938, GB:U13680, GB:X15954, GB:X15957, SP:P07864, PID:187074, PID:307120, and PID:535360; identified by sequence similarity NP_746782.1 similar to GB:L13857, and PID:306778; identified by sequence similarity NP_746783.1 similar to GB:M68516, GB:S69366, GB:S69363, GB:S69364, GB:S69574, GB:S69365, GB:J02639, GB:S58545, GB:U35464, SP:P05154, PID:1144561, PID:180550, and PID:189678; identified by sequence similarity NP_746784.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme NP_746785.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ NP_746786.1 identified by match to PFAM protein family HMM PF03653 NP_746787.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis NP_746788.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit NP_746789.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit NP_746790.1 identified by match to PFAM protein family HMM PF04287 NP_746791.1 identified by match to PFAM protein family HMM PF00515 NP_746792.1 similar to SP:P02919; identified by sequence similarity NP_746794.1 similar to GP:9950961; identified by sequence similarity NP_746795.1 similar to GP:9950963; identified by sequence similarity NP_746796.1 with HmuTU is involved in the transport of hemin NP_746797.1 identified by match to PFAM protein family HMM PF04133 NP_746798.1 identified by match to PFAM protein family HMM PF01497 NP_746799.1 identified by match to PFAM protein family HMM PF00355 NP_746800.1 Regulatory factor involved in maltose metabolism NP_746801.1 identified by match to PFAM protein family HMM PF00155 NP_746802.1 identified by match to PFAM protein family HMM PF01258 NP_746803.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu NP_746804.1 identified by match to PFAM protein family HMM PF04306 NP_746805.1 identified by match to PFAM protein family HMM PF00072 NP_746806.1 similar to GP:3650360, and SP:P13685; identified by sequence similarity NP_746807.1 similar to SP:O87790, and SP:O87790; identified by sequence similarity NP_746808.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate NP_746809.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine NP_746810.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family NP_746811.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA NP_746814.1 similar to GP:9949526, and SP:P47243; identified by sequence similarity NP_746815.1 identified by match to PFAM protein family HMM PF02619 NP_746816.1 similar to GB:M18731, and PID:182949; identified by sequence similarity NP_746817.1 similar to SP:O87792, and SP:P05055; identified by sequence similarity NP_746818.2 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence NP_746819.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock NP_746820.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex NP_746821.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination NP_746822.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins NP_746823.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate NP_746824.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate NP_746825.1 similar to SP:P26282, and SP:P26282; identified by sequence similarity NP_746826.1 similar to GB:M15502, SP:P07954, PID:1545996, and PID:182794; identified by sequence similarity NP_746827.1 similar to GB:M64351, GB:L26244, GB:X57727, GB:M62379, and PID:339359; identified by sequence similarity NP_746828.1 similar to GB:X65584, PID:39092, PID:1480839, GB:X65584, PID:39092, and PID:1480839; identified by sequence similarity NP_746830.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus NP_746831.2 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity NP_746832.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers NP_746833.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis NP_746834.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion NP_746835.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria NP_746836.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor NP_746837.1 identified by match to TIGR protein family HMM TIGR00634 NP_746838.1 similar to GB:U09067, PID:483876, PID:553456, GB:U09067, PID:483876, and PID:553456; identified by sequence similarity NP_746839.1 similar to SP:O68564; identified by sequence similarity NP_746840.1 identified by match to PFAM protein family HMM PF03654 NP_746841.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation NP_746842.1 identified by match to PFAM protein family HMM PF00392 NP_746843.1 identified by match to PFAM protein family HMM PF03977 NP_746844.1 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration NP_746845.1 identified by match to PFAM protein family HMM PF02913 NP_746846.1 similar to GP:9948479; identified by sequence similarity NP_746847.1 similar to GP:3881569; identified by sequence similarity NP_746848.1 similar to GB:J04569, GB:M26638, SP:P14136, PID:183075, PID:553302, GB:J04569, GB:M26638, SP:P14136, PID:183075, and PID:553302; identified by sequence similarity NP_746849.1 similar to GB:U12011; identified by sequence similarity NP_746850.1 similar to SP:P19705, and SP:P19705; identified by sequence similarity NP_746852.1 similar to GP:8037785, and GP:8037785; identified by sequence similarity NP_746853.1 similar to GP:5824138, and GP:8037784; identified by sequence similarity NP_746854.1 identified by match to PFAM protein family HMM PF00497 NP_746855.1 similar to GB:L24552, SP:P41109, and PID:404080; identified by sequence similarity NP_746856.1 similar to GB:L24552, SP:P41109, and PID:404080; identified by sequence similarity NP_746857.1 similar to SP:P35651, and PID:550405; identified by sequence similarity NP_746858.1 similar to GP:3372642; identified by sequence similarity NP_746859.1 similar to SP:O87278, and SP:O87278; identified by sequence similarity NP_746860.1 identified by match to PFAM protein family HMM PF00440 NP_746861.1 similar to GP:2981048, GB:M31516, GB:M30142, SP:P08174, and PID:181476; identified by sequence similarity NP_746862.1 similar to GB:X53331, GB:X07362, GB:M55270, GB:M58549, SP:P08493, PID:187591, PID:187593, PID:34614, and PID:34618; identified by sequence similarity NP_746863.1 similar to GB:S95936, GB:M17610, GB:M17611, GB:M17612, GB:M17613, GB:M17614, GB:M12525, GB:M26641, GB:M21570, GB:M11372, GB:M11361, GB:M11362, GB:M11363, GB:M11364, GB:M11365, GB:M11366, GB:M11367, GB:M11368, GB:M11369, GB:M11370, GB:M11371, SP:P02787, PID:339453, PID:339469, PID:339475, PID:339485, PID:339486, PID:339989, PID:553788, GB:S95936, GB:M17610, GB:M17611, GB:M17612, GB:M17613, GB:M17614, GB:M12525, GB:M26641, GB:M21570, GB:M11372, GB:M11361, GB:M11362, GB:M11363, GB:M11364, GB:M11365, GB:M11366, GB:M11367, GB:M11368, GB:M11369, GB:M11370, GB:M11371, SP:P02787, PID:339453, PID:339469, PID:339475, PID:339485, PID:339486, PID:339989, and PID:553788; identified by sequence similarity NP_746864.1 similar to GP:6714755; identified by sequence similarity NP_746865.1 similar to GP:6573304; identified by sequence similarity NP_746866.1 similar to GP:6740905; identified by sequence similarity NP_746867.1 similar to GP:9950128; identified by sequence similarity NP_746868.1 identified by match to TIGR protein family HMM TIGR00189 NP_746869.1 identified by match to PFAM protein family HMM PF00583 NP_746870.1 similar to GB:M62420, GB:J04056, GB:X88010, SP:P16152, PID:179978, and PID:181037; identified by sequence similarity NP_746871.1 identified by match to TIGR protein family HMM TIGR00275 NP_746872.1 identified by match to PFAM protein family HMM PF00271 NP_746873.1 identified by match to PFAM protein family HMM PF04172 NP_746874.1 identified by match to PFAM protein family HMM PF00929 NP_746875.1 identified by match to PFAM protein family HMM PF01936 NP_746876.1 identified by match to PFAM protein family HMM PF00639 NP_746877.1 similar to GP:9950143; identified by sequence similarity NP_746878.1 similar to SP:P37024; identified by sequence similarity NP_746879.1 similar to GP:9950151; identified by sequence similarity NP_746880.1 identified by match to TIGR protein family HMM TIGR01297 NP_746882.1 identified by match to PFAM protein family HMM PF01037 NP_746883.1 similar to GP:9950155; identified by sequence similarity NP_746884.2 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile NP_746885.1 identified by match to PFAM protein family HMM PF00441 NP_746886.1 identified by match to PFAM protein family HMM PF02518 NP_746887.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine NP_746888.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate NP_746889.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway NP_746890.1 similar to GB:U04209, SP:P55081, PID:434656, GB:U04209, SP:P55081, and PID:434656; identified by sequence similarity NP_746891.1 similar to GP:9950170; identified by sequence similarity NP_746892.1 identified by match to PFAM protein family HMM PF02562 NP_746893.1 identified by match to TIGR protein family HMM TIGR00043 NP_746894.1 similar to SP:Q9R874; identified by sequence similarity NP_746895.1 Transfers the fatty acyl group on membrane lipoproteins NP_746896.1 similar to GP:6723233; identified by sequence similarity NP_746897.1 identified by match to PFAM protein family HMM PF02698 NP_746898.1 similar to GP:9950177; identified by sequence similarity NP_746899.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase NP_746900.1 similar to GP:9950179; identified by sequence similarity NP_746901.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA NP_746902.1 identified by match to PFAM protein family HMM PF03889 NP_746903.1 identified by match to PFAM protein family HMM PF01471 NP_746904.1 similar to SP:Q9ZBI5, SP:P17996, GB:D26486, GB:X53034, PID:44166, and PID:804883; identified by sequence similarity NP_746905.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group NP_746906.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein NP_746908.1 similar to GP:4887207, GB:M19722, GB:K03219, SP:P09769, PID:1335011, PID:182574, PID:182588, PID:338463, PID:553223, and PID:553286; identified by sequence similarity NP_746909.1 similar to GP:4887206; identified by sequence similarity NP_746910.1 similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, and PID:553171; identified by sequence similarity NP_746911.1 similar to GB:X60459, SP:P17181, PID:1247459, PID:1247461, PID:1567383, PID:1567385, PID:306914, and PID:32672; identified by sequence similarity NP_746912.1 similar to GB:J02938, GB:U13680, GB:X15954, GB:X15957, SP:P07864, PID:187074, PID:307120, and PID:535360; identified by sequence similarity NP_746913.2 SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA NP_746914.1 identified by match to PFAM protein family HMM PF02410 NP_746915.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria NP_746916.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway NP_746917.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair NP_746918.1 identified by match to PFAM protein family HMM PF04279 NP_746919.1 identified by match to PFAM protein family HMM PF02190 NP_746920.1 similar to GP:9950206; identified by sequence similarity NP_746921.1 similar to GP:9950207; identified by sequence similarity NP_746922.1 identified by match to PFAM protein family HMM PF01575 NP_746923.2 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype NP_746925.1 identified by match to PFAM protein family HMM PF04131 NP_746926.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription NP_746927.1 involved in de novo purine biosynthesis NP_746928.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis NP_746929.1 identified by match to PFAM protein family HMM PF04171 NP_746930.1 identified by match to PFAM protein family HMM PF01914 NP_746931.1 similar to GP:9948995; identified by sequence similarity NP_746932.1 catalyzes the formation of precorrin-3 from precorrin-2 NP_746933.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate NP_746934.1 identified by match to PFAM protein family HMM PF03460 NP_746935.1 identified by match to PFAM protein family HMM PF00590 NP_746936.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A NP_746937.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6 NP_746938.1 identified by match to PFAM protein family HMM PF02104 NP_746939.1 similar to GB:Z23013, SP:Q08815, and PID:396549; identified by sequence similarity NP_746941.1 identified by match to PFAM protein family HMM PF04314 NP_746942.1 similar to GP:9949964; identified by sequence similarity NP_746943.1 similar to GB:M90413, PID:153311, GB:M90413, and PID:153311; identified by sequence similarity NP_746944.1 similar to GB:M77806, and PID:143926; identified by sequence similarity NP_746945.1 involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine NP_746947.1 identified by match to PFAM protein family HMM PF02653 NP_746948.1 similar to GP:9951132; identified by sequence similarity NP_746949.1 identified by match to PFAM protein family HMM PF00005 NP_746950.1 identified by match to PFAM protein family HMM PF00005 NP_746951.1 similar to SP:P38106, GB:U10148, GB:U00096, PID:1788925, PID:987647, and PID:994818; identified by sequence similarity NP_746953.1 similar to GB:X05615, GB:X06065, GB:X02154, SP:P01266, PID:1335349, PID:1359884, PID:2204216, PID:37174, GB:X05615, GB:X06065, GB:X02154, SP:P01266, PID:1335349, PID:1359884, PID:2204216, and PID:37174; identified by sequence similarity NP_746954.1 identified by match to PFAM protein family HMM PF00012 NP_746955.1 identified by match to PFAM protein family HMM PF01594 NP_746956.1 similar to SP:P27295; identified by sequence similarity NP_746957.1 identified by match to PFAM protein family HMM PF00165 NP_746958.1 identified by match to PFAM protein family HMM PF00892 NP_746959.1 similar to GP:3098280, GB:X17644, SP:P15170, PID:1930145, and PID:31921; identified by sequence similarity NP_746960.1 osmotically-inducible lipoprotein E; activator of ntr-like gene protein NP_746961.1 identified by match to TIGR protein family HMM TIGR00754 NP_746963.1 similar to GP:8843968; identified by sequence similarity NP_746964.1 identified by match to PFAM protein family HMM PF00440 NP_746965.1 similar to SP:P29954, GB:M25813, SP:P22105, PID:1794184, PID:183070, PID:1841546, PID:2347137, and PID:394794; identified by sequence similarity NP_746967.1 identified by match to PFAM protein family HMM PF00106 NP_746968.1 identified by match to PFAM protein family HMM PF00005 NP_746969.1 identified by match to PFAM protein family HMM PF00005 NP_746970.1 identified by match to PFAM protein family HMM PF02653 NP_746971.1 identified by match to PFAM protein family HMM PF04306 NP_746972.1 identified by match to PFAM protein family HMM PF01094 NP_746973.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate NP_746974.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers NP_746975.1 similar to GP:11037693, GB:J03799, GB:X15005, GB:S37431, GB:M14199, GB:X61156, GB:U36484, SP:P08865, PID:1125065, PID:34272, and PID:386857; identified by sequence similarity NP_746976.1 identified by match to PFAM protein family HMM PF03641 NP_746977.2 identified by match to TIGR protein family HMM TIGR00089 NP_746978.1 unwinds double stranded DNA NP_746979.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk NP_746980.1 identified by match to PFAM protein family HMM PF03647 NP_746981.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit NP_746982.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 NP_746983.1 identified by match to TIGR protein family HMM TIGR00186 NP_746984.1 similar to SP:P21499; identified by sequence similarity NP_746985.1 similar to SP:P35755; identified by sequence similarity NP_746986.1 identified by match to PFAM protein family HMM PF03553 NP_746991.1 similar to GP:2626833; identified by sequence similarity NP_746992.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis NP_746993.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine NP_746994.1 identified by match to PFAM protein family HMM PF01145 NP_746995.1 similar to GP:9951222; identified by sequence similarity NP_746996.1 similar to GB:X58199, SP:P35612, and PID:29369; identified by sequence similarity NP_746997.1 Stimulates the elongation of poly(A) tails NP_746998.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity NP_746999.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex NP_747000.1 similar to SP:Q46929; identified by sequence similarity NP_747001.1 identified by match to TIGR protein family HMM TIGR00150 NP_747002.1 identified by match to PFAM protein family HMM PF01256 NP_747003.1 identified by match to TIGR protein family HMM TIGR00276 NP_747004.1 identified by match to PFAM protein family HMM PF03458 NP_747005.1 3'-5' exoribonuclease specific for small oligoribonuclotides NP_747006.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity NP_747007.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine NP_747008.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine NP_747010.1 similar to GB:L31881, GB:U07811, SP:Q14938, PID:469041, PID:499621, PID:619726, and PID:619730; identified by sequence similarity NP_747011.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine NP_747012.1 similar to GB:L07758, SP:Q13610, and PID:177765; identified by sequence similarity NP_747014.1 identified by match to PFAM protein family HMM PF03886 NP_747015.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling NP_747016.1 similar to GP:9951247, and GP:9951247; identified by sequence similarity NP_747018.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling NP_747020.1 similar to GB:X16302, SP:P18065, PID:179477, PID:306926, PID:33010, and PID:412023; identified by sequence similarity NP_747022.1 identified by match to TIGR protein family HMM TIGR00052 NP_747024.1 similar to GB:L17309, SP:P39066, PID:348051, PID:2293317, and GB:AL009126; identified by sequence similarity NP_747025.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine NP_747026.1 similar to SP:P02930; identified by sequence similarity NP_747027.1 identified by match to PFAM protein family HMM PF00082 NP_747029.1 identified by match to PFAM protein family HMM PF00529 NP_747030.1 identified by match to PFAM protein family HMM PF04144 NP_747031.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A NP_747032.1 identified by match to PFAM protein family HMM PF03466 NP_747033.1 identified by match to PFAM protein family HMM PF00893 NP_747034.1 identified by match to TIGR protein family HMM TIGR00136 NP_747035.1 identified by match to PFAM protein family HMM PF00248 NP_747037.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose NP_747038.1 similar to GB:X61177, SP:Q01344, PID:1247445, PID:1247447, PID:186343, PID:186345, PID:186388, PID:33840, PID:33844, PID:36466, and PID:825601; identified by sequence similarity NP_747039.1 similar to GP:6742658, and GP:6742658; identified by sequence similarity NP_747040.1 similar to GP:4336795, and GP:4336795; identified by sequence similarity NP_747041.1 identified by match to PFAM protein family HMM PF00534 NP_747042.1 similar to GP:4455735; identified by sequence similarity NP_747043.1 identified by match to PFAM protein family HMM PF00534 NP_747046.1 identified by match to PFAM protein family HMM PF00534 NP_747047.1 similar to GP:9951291; identified by sequence similarity NP_747048.1 similar to GP:9951306; identified by sequence similarity NP_747049.1 similar to GP:6693830, and GP:6693830; identified by sequence similarity NP_747050.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein NP_747051.1 identified by match to PFAM protein family HMM PF00441 NP_747052.1 identified by match to PFAM protein family HMM PF01523 NP_747054.1 identified by match to TIGR protein family HMM TIGR00711 NP_747055.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA NP_747056.1 identified by match to TIGR protein family HMM TIGR00275 NP_747057.1 identified by match to TIGR protein family HMM TIGR01666 NP_747058.1 identified by match to PFAM protein family HMM PF00497 NP_747059.1 identified by match to PFAM protein family HMM PF00583 NP_747061.1 identified by match to PFAM protein family HMM PF01863 NP_747062.1 similar to SP:P21979; identified by sequence similarity NP_747063.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis NP_747065.1 similar to GP:6911261; identified by sequence similarity NP_747066.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway NP_747067.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate NP_747068.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_747069.1 identified by match to PFAM protein family HMM PF01022 NP_747070.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase NP_747071.1 this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+ NP_747073.1 similar to GP:9946408, GB:M29893, SP:P11233, SP:P11234, PID:190850, and PID:35846; identified by sequence similarity NP_747074.1 identified by match to PFAM protein family HMM PF03562 NP_747075.1 identified by match to PFAM protein family HMM PF01124 NP_747076.1 identified by match to PFAM protein family HMM PF00892 NP_747077.1 identified by match to PFAM protein family HMM PF03596 NP_747078.1 identified by match to PFAM protein family HMM PF01662 NP_747079.1 similar to SP:O54235; identified by sequence similarity NP_747081.1 identified by match to PFAM protein family HMM PF00497 NP_747082.1 identified by match to TIGR protein family HMM TIGR01587 NP_747083.1 identified by match to PFAM protein family HMM PF04264 NP_747084.1 identified by match to PFAM protein family HMM PF01292 NP_747085.1 identified by match to PFAM protein family HMM PF01593 NP_747086.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate NP_747087.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase NP_747088.1 similar to GB:M27339, and PID:540472; identified by sequence similarity NP_747090.1 identified by match to TIGR protein family HMM TIGR01387 NP_747091.1 similar to GB:Z15114, SP:P05129, PID:35497, GB:Z15114, SP:P05129, and PID:35497; identified by sequence similarity NP_747092.1 identified by match to PFAM protein family HMM PF01584 NP_747093.1 similar to GB:M29877, SP:P04066, PID:1335066, PID:178409, PID:182779, PID:182788, and PID:182790; identified by sequence similarity NP_747094.1 similar to GB:X07898, SP:P02585, PID:1220372, PID:339736, PID:36729, GB:X07898, SP:P02585, PID:1220372, PID:339736, and PID:36729; identified by sequence similarity NP_747095.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione NP_747096.1 identified by match to PFAM protein family HMM PF03544 NP_747097.1 similar to GP:10442816, and GP:10442816; identified by sequence similarity NP_747098.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function NP_747099.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity NP_747100.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis NP_747101.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis NP_747102.1 heat shock protein involved in degradation of misfolded proteins NP_747103.1 heat shock protein involved in degradation of misfolded proteins NP_747104.1 similar to GB:M96233, GB:M96234, GB:M99421, GB:M99422, GB:X68677, GB:X56837, SP:P09488, SP:Q03013, PID:306817, PID:306819, and PID:31937; identified by sequence similarity NP_747105.1 similar to GB:Z19054, SP:P35222, PID:38520, PID:860988, GB:Z19054, SP:P35222, PID:38520, and PID:860988; identified by sequence similarity NP_747106.1 similar to GB:M57763, SP:P26438, PID:178989, GB:M57763, SP:P26438, and PID:178989; identified by sequence similarity NP_747107.1 similar to GB:X66975, GB:X60648, GB:X65371, GB:X62006, GB:X65372, SP:P26599, PID:32354, PID:35770, PID:35772, GB:X66975, GB:X60648, GB:X65371, GB:X62006, GB:X65372, SP:P26599, PID:32354, PID:35770, and PID:35772; identified by sequence similarity NP_747108.1 similar to GP:4104926, and GP:4062971; identified by sequence similarity NP_747109.1 similar to GP:4104925, and GP:4104925; identified by sequence similarity NP_747110.1 similar to GP:3955016, and GP:4104924; identified by sequence similarity NP_747112.1 similar to GP:3955015, and GP:3955015; identified by sequence similarity NP_747113.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone NP_747115.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers NP_747116.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis NP_747117.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes NP_747118.1 Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif NP_747119.1 identified by match to PFAM protein family HMM PF00902 NP_747120.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase NP_747121.1 identified by match to PFAM protein family HMM PF00672 NP_747122.1 identified by match to PFAM protein family HMM PF00672 NP_747123.1 identified by match to PFAM protein family HMM PF00005 NP_747124.1 identified by match to TIGR protein family HMM TIGR01726 NP_747125.1 identified by match to PFAM protein family HMM PF00497 NP_747126.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space NP_747127.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan NP_747128.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine NP_747129.1 similar to GB:X62583, and PID:42775; identified by sequence similarity NP_747130.1 similar to GP:2642341, and GP:2642341; identified by sequence similarity NP_747131.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway NP_747132.1 similar to GP:2642339; identified by sequence similarity NP_747133.1 catalyzes the degradation of histidine to urocanate and ammmonia NP_747134.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism NP_747136.1 similar to SP:P22773, GB:L11701, SP:P80108, SP:Q15127, and PID:388763; identified by sequence similarity NP_747137.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate NP_747141.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate NP_747142.1 similar to GB:L08237, and PID:950411; identified by sequence similarity NP_747143.1 similar to GP:9951085, and GP:9951085; identified by sequence similarity NP_747144.1 similar to GP:6118365; identified by sequence similarity NP_747145.1 identified by match to TIGR protein family HMM TIGR01394 NP_747146.1 Required for the synthesis of the thiazole moiety NP_747147.1 similar to SP:P06711; identified by sequence similarity NP_747148.1 identified by match to PFAM protein family HMM PF02518 NP_747149.1 similar to GP:9951423; identified by sequence similarity NP_747151.1 similar to GP:7741879; identified by sequence similarity NP_747152.1 similar to GP:9951425, and GP:9951425; identified by sequence similarity NP_747153.1 identified by match to TIGR protein family HMM TIGR00185 NP_747154.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA NP_747155.1 identified by match to PFAM protein family HMM PF00462 NP_747156.1 similar to GP:9951429; identified by sequence similarity NP_747157.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate NP_747158.1 identified by match to PFAM protein family HMM PF01551 NP_747159.1 identified by match to PFAM protein family HMM PF03572 NP_747162.1 identified by match to PFAM protein family HMM PF04173 NP_747164.1 catalyzes the formation of betaine from betaine aldehyde NP_747165.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine NP_747167.2 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli NP_747168.1 small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS NP_747169.1 identified by match to PFAM protein family HMM PF02696 NP_747170.1 similar to GB:K01383, SP:P02795, SP:P04731, SP:P04732, SP:P04733, SP:P07438, SP:P13640, SP:P25713, SP:P80294, SP:P80295, SP:P80296, SP:P80297, PID:386864, PID:517349, PID:517351, and PID:914851; identified by sequence similarity NP_747171.1 identified by match to PFAM protein family HMM PF00991 NP_747172.1 similar to GP:9951318, and GP:9951318; identified by sequence similarity NP_747173.1 identified by match to TIGR protein family HMM TIGR00880 NP_747174.1 identified by match to PFAM protein family HMM PF04076 NP_747175.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III NP_747176.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate NP_747177.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate NP_747178.1 similar to GP:9951327, and GP:9951327; identified by sequence similarity NP_747179.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis NP_747180.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis NP_747181.1 similar to GP:9951330; identified by sequence similarity NP_747182.1 In P. aeruginosa the cluster is pilQ-P-O-N-M. The C-terminal half of P. aeruginosa PilO has 24 % identity to the N-terminus of this protein and the 79 aa C- terminus of P. aeruginosa PilP has 37 % identity to the C-terminus of this protein.; similar to GB:M86752, SP:P31948, and PID:184565; identified by sequence similarity NP_747184.1 similar to GP:895925, GB:D90040, GB:U23052, GB:U23434, GB:D10870, GB:D10871, GB:D10872, GB:U53473, SP:P11245, PID:1297332, PID:219412, PID:219416, PID:219872, PID:219875, PID:219878, PID:28228, PID:727413, and PID:727457; identified by sequence similarity NP_747185.1 similar to GP:1763284, and SP:P02918; identified by sequence similarity NP_747186.1 identified by match to PFAM protein family HMM PF00390 NP_747187.1 identified by match to PFAM protein family HMM PF00565 NP_747188.2 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome NP_747189.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity NP_747190.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase NP_747193.1 identified by match to PFAM protein family HMM PF00877 NP_747194.1 similar to GB:X52425, SP:P24394, and PID:33834; identified by sequence similarity NP_747195.1 similar to GB:M13143, SP:P03952, and PID:190263; identified by sequence similarity NP_747196.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate NP_747197.1 identified by match to PFAM protein family HMM PF04020 NP_747198.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine NP_747199.1 similar to GP:13540422; identified by sequence similarity NP_747201.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine NP_747202.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_747204.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine NP_747205.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate NP_747206.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate NP_747207.1 similar to GP:9946231; identified by sequence similarity NP_747208.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan NP_747209.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters NP_747210.1 similar to GP:5821403; identified by sequence similarity NP_747211.1 similar to GB:K03474, GB:A18521, SP:P03971, PID:386953, and PID:512453; identified by sequence similarity NP_747212.1 similar to GP:9946225, GB:M95585, GB:X68985, PID:184224, and PID:402776; identified by sequence similarity NP_747213.1 similar to GP:9946224; identified by sequence similarity NP_747214.1 identified by match to PFAM protein family HMM PF00675 NP_747215.1 identified by match to PFAM protein family HMM PF03602 NP_747216.1 similar to GP:9946224; identified by sequence similarity NP_747217.1 identified by match to PFAM protein family HMM PF00675 NP_747218.1 identified by match to TIGR protein family HMM TIGR01250 NP_747219.1 similar to SP:P97532; identified by sequence similarity NP_747220.1 similar to GP:9946218; identified by sequence similarity NP_747221.1 similar to GP:3336914; identified by sequence similarity NP_747223.1 similar to GP:9946215; identified by sequence similarity NP_747224.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA NP_747225.1 similar to SP:P00208; identified by sequence similarity NP_747226.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases NP_747227.1 similar to GP:9946206, and GP:9946206; identified by sequence similarity NP_747228.1 identified by match to PFAM protein family HMM PF03602 NP_747229.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis NP_747230.1 identified by match to PFAM protein family HMM PF01661 NP_747231.1 similar to GP:9951606; identified by sequence similarity NP_747232.1 similar to SP:P31586, PID:42189, SP:P31586, and PID:42189; identified by sequence similarity NP_747233.1 identified by match to PFAM protein family HMM PF00186 NP_747235.1 identified by match to TIGR protein family HMM TIGR00650 NP_747236.1 identified by match to PFAM protein family HMM PF01547 NP_747237.1 identified by match to TIGR protein family HMM TIGR01581 NP_747238.1 identified by match to TIGR protein family HMM TIGR00955 NP_747239.1 similar to GP:7579043; identified by sequence similarity NP_747240.1 similar to GP:9949854, GB:L14542, SP:Q07444, and PID:292361; identified by sequence similarity NP_747241.1 identified by match to PFAM protein family HMM PF00376 NP_747242.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived NP_747243.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein NP_747244.1 similar to GP:9946189; identified by sequence similarity NP_747245.1 similar to GP:9946187; identified by sequence similarity NP_747246.1 similar to GP:3641832; identified by sequence similarity NP_747247.1 hydrolyzes diadenosine polyphosphate NP_747248.1 similar to GP:9946183; identified by sequence similarity NP_747250.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway NP_747251.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway NP_747252.1 similar to GP:9948021; identified by sequence similarity NP_747253.1 identified by match to PFAM protein family HMM PF01436 NP_747254.1 identified by match to PFAM protein family HMM PF01557 NP_747255.1 identified by match to TIGR protein family HMM TIGR01679 NP_747256.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate NP_747258.1 identified by match to TIGR protein family HMM TIGR01096 NP_747259.1 similar to GP:9946158; identified by sequence similarity NP_747260.1 similar to GP:9946156; identified by sequence similarity NP_747262.1 similar to GP:9946154; identified by sequence similarity NP_747264.1 identified by match to TIGR protein family HMM TIGR01173 NP_747265.1 similar to SP:P15558; identified by sequence similarity NP_747266.1 identified by match to TIGR protein family HMM TIGR00363 NP_747267.1 identified by match to PFAM protein family HMM PF00158 NP_747268.1 similar to GP:9946036; identified by sequence similarity NP_747269.1 identified by match to TIGR protein family HMM TIGR00972 NP_747270.1 similar to SP:P16702; identified by sequence similarity NP_747271.1 similar to GB:X13585, GB:M22348, GB:M37387, SP:P14927, PID:190802, PID:190804, PID:190816, PID:37580, and PID:553631; identified by sequence similarity NP_747272.1 identified by match to PFAM protein family HMM PF03697 NP_747274.1 identified by match to PFAM protein family HMM PF03626 NP_747275.1 identified by match to TIGR protein family HMM TIGR01730 NP_747276.1 identified by match to TIGR protein family HMM TIGR01730 NP_747278.1 identified by match to PFAM protein family HMM PF04241 NP_747279.1 identified by match to TIGR protein family HMM TIGR01581 NP_747280.1 similar to SP:P31134; identified by sequence similarity NP_747281.1 similar to GP:13194613; identified by sequence similarity NP_747282.1 similar to GB:M81758, SP:P35499, PID:292487, PID:338213, and PID:908809; identified by sequence similarity NP_747283.1 similar to SP:P32724, GB:X58406, PID:581361, PID:2094830, and GB:AL123456; identified by sequence similarity NP_747284.1 similar to SP:P28787, GB:X68129, and PID:45902; identified by sequence similarity NP_747285.1 similar to GP:9948046, SP:P28787, GB:X68129, and PID:45902; identified by sequence similarity NP_747286.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis NP_747287.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis NP_747288.1 similar to GP:9951516; identified by sequence similarity NP_747289.1 similar to GP:9948033, GB:J04173, SP:P18669, and PID:551174; identified by sequence similarity NP_747291.1 identified by match to PFAM protein family HMM PF00437 NP_747292.1 similar to GP:9951793; identified by sequence similarity NP_747293.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine NP_747294.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor NP_747295.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein NP_747296.1 similar to GP:9951523; identified by sequence similarity NP_747297.1 similar to GB:D12621, GB:D12620, GB:S63604, SP:Q08477, PID:303603, and PID:391716; identified by sequence similarity NP_747298.1 catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol NP_747300.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone NP_747301.1 similar to SP:P15034; identified by sequence similarity NP_747302.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown NP_747304.1 identified by match to PFAM protein family HMM PF01812 NP_747307.1 similar to GP:9951540; identified by sequence similarity NP_747308.1 identified by match to PFAM protein family HMM PF03772 NP_747309.1 identified by match to TIGR protein family HMM TIGR01291 NP_747310.1 similar to GP:9951542; identified by sequence similarity NP_747311.1 identified by match to TIGR protein family HMM TIGR01751 NP_747312.1 similar to GP:495778, and SP:P39163; identified by sequence similarity NP_747313.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose NP_747314.1 similar to GP:9951546; identified by sequence similarity NP_747315.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes NP_747316.1 identified by match to TIGR protein family HMM TIGR00411 NP_747317.1 similar to GP:4760367, and SP:P29014; identified by sequence similarity NP_747318.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate NP_747319.1 identified by match to PFAM protein family HMM PF04279 NP_747320.1 identified by match to PFAM protein family HMM PF04116 NP_747321.1 similar to SP:P26428; identified by sequence similarity NP_747322.1 identified by match to PFAM protein family HMM PF02639 NP_747323.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP NP_747324.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation NP_747325.1 similar to GP:9949921; identified by sequence similarity NP_747326.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly NP_747327.1 similar to GB:X57173, PID:40532, PID:2353072, PID:2353076, PID:2353080, PID:2353082, PID:2353084, PID:2353088, PID:2353090, PID:2353092, PID:2353096, PID:2353106, PID:2353116, PID:2353118, PID:2353122, GB:X57173, PID:40532, PID:2353072, PID:2353076, PID:2353080, PID:2353082, PID:2353084, PID:2353088, PID:2353090, PID:2353092, PID:2353096, PID:2353106, PID:2353116, PID:2353118, and PID:2353122; identified by sequence similarity NP_747328.1 identified by match to PFAM protein family HMM PF00278 NP_747329.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate NP_747330.1 similar to GB:X70670, GB:U01097, PID:1150846, PID:403299, GB:X70670, GB:U01097, PID:1150846, and PID:403299; identified by sequence similarity NP_747331.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs NP_747332.1 identified by match to TIGR protein family HMM TIGR01668 NP_747333.1 similar to GP:9951599; identified by sequence similarity NP_747334.1 identified by match to PFAM protein family HMM PF00909 NP_747335.1 similar to GB:J03077, GB:J03015, GB:M86181, GB:M60255, GB:M60258, GB:X57107, GB:D00422, GB:M81355, GB:X57108, PID:1565257, PID:183231, PID:220064, PID:30235, PID:337756, PID:337760, PID:337762, PID:337765, and PID:337767; identified by sequence similarity NP_747336.1 similar to GP:9951603; identified by sequence similarity NP_747337.1 identified by match to PFAM protein family HMM PF03745 NP_747338.1 similar to SP:P57015; identified by sequence similarity NP_747339.1 similar to GP:2708665; identified by sequence similarity NP_747340.1 similar to GB:M28880, GB:X16609, GB:X16609, SP:P16157, GB:S82671, PID:1845219, PID:747710, GB:M28880, GB:X16609, GB:X16609, SP:P16157, GB:S82671, PID:1845219, and PID:747710; identified by sequence similarity NP_747341.1 similar to GP:2565293; identified by sequence similarity NP_747342.1 similar to GP:2598025; identified by sequence similarity NP_747343.1 similar to GP:7271850; identified by sequence similarity NP_747344.1 similar to GP:9947129; identified by sequence similarity NP_747345.1 identified by match to PFAM protein family HMM PF00165 NP_747346.1 similar to GP:4584493; identified by sequence similarity NP_747347.1 similar to GP:9947134, GB:Y00281, SP:P04843, and PID:36053; identified by sequence similarity NP_747349.1 similar to GB:M17219, SP:P04898, SP:P04899, SP:P08754, and PID:386747; identified by sequence similarity NP_747350.1 similar to GP:9948462; identified by sequence similarity NP_747351.1 identified by match to PFAM protein family HMM PF03573 NP_747352.1 identified by match to PFAM protein family HMM PF04144 NP_747353.1 identified by match to TIGR protein family HMM TIGR01416 NP_747354.1 similar to SP:P22862, GB:U09075, PID:483882, PID:483886, PID:483892, PID:483898, PID:483902, PID:506423, PID:567134, PID:567136, PID:567138, PID:567154, PID:567158, PID:567168, PID:567172, PID:587330, PID:587332, PID:587334, PID:619613, PID:619614, PID:642378, PID:642582, PID:722458, PID:791028, PID:939916, and PID:939919; identified by sequence similarity NP_747355.1 similar to GB:Z23013, SP:Q08815, and PID:396549; identified by sequence similarity NP_747356.1 similar to GB:M17219, SP:P04898, SP:P04899, SP:P08754, and PID:386747; identified by sequence similarity NP_747357.1 identified by match to PFAM protein family HMM PF00027 NP_747358.1 identified by match to TIGR protein family HMM TIGR00137 NP_747359.1 identified by match to TIGR protein family HMM TIGR01722 NP_747360.1 identified by match to PFAM protein family HMM PF03466 NP_747361.1 similar to SP:Q04314, GB:X60777, PID:46933, SP:Q04314, GB:X60777, and PID:46933; identified by sequence similarity NP_747362.1 similar to GP:9951608; identified by sequence similarity NP_747363.1 functions as a Na(+)/drug antiporter NP_747364.1 identified by match to TIGR protein family HMM TIGR00254 NP_747365.1 identified by match to PFAM protein family HMM PF01443 NP_747366.1 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine NP_747367.1 similar to SP:P38942; identified by sequence similarity NP_747368.1 similar to GB:M33509, GB:M33512, GB:M33518, GB:Z15025, SP:P48634, PID:179339, and PID:179345; identified by sequence similarity NP_747369.1 identified by match to PFAM protein family HMM PF01381 NP_747370.1 catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA NP_747371.1 catalyzes the oxidative deamination of D-amino acids NP_747372.1 similar to GP:9951624; identified by sequence similarity NP_747373.1 similar to GP:9949825, and GP:9949825; identified by sequence similarity NP_747374.1 similar to GB:X65867, GB:S60710, SP:P30566, PID:28904, and PID:28905; identified by sequence similarity NP_747376.1 identified by match to PFAM protein family HMM PF01276 NP_747377.1 similar to SP:Q04222, and PID:141982; identified by sequence similarity NP_747378.1 identified by match to PFAM protein family HMM PF04143 NP_747379.1 identified by match to TIGR protein family HMM TIGR01722 NP_747382.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif NP_747383.1 required for 70S ribosome assembly NP_747384.1 identified by match to PFAM protein family HMM PF00496 NP_747385.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase NP_747386.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine NP_747387.1 catalyzes the formation of dUMP from dUTP NP_747389.1 similar to GB:D13643, and PID:285997; identified by sequence similarity NP_747390.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate NP_747391.1 similar to GP:7741879; identified by sequence similarity NP_747392.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate NP_747393.1 similar to GP:1079662; identified by sequence similarity NP_747394.1 identified by match to PFAM protein family HMM PF03675 NP_747395.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs NP_747396.2 identified by match to PFAM protein family HMM PF03755 NP_747397.1 Essential for recycling GMP and indirectly, cGMP NP_747398.1 identified by match to PFAM protein family HMM PF03806 NP_747399.1 similar to SP:P76038; identified by sequence similarity NP_747400.1 similar to GP:9948046, SP:P78061, SP:P78061, SP:P28787, GB:X68129, and PID:45902; identified by sequence similarity NP_747401.1 similar to GP:9948295; identified by sequence similarity NP_747402.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits NP_747403.1 similar to GP:9951657; identified by sequence similarity NP_747404.1 similar to SP:P52759; identified by sequence similarity NP_747406.1 identified by match to TIGR protein family HMM TIGR01746 NP_747407.1 identified by match to PFAM protein family HMM PF01618 NP_747408.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell NP_747409.1 similar to GB:M17517, GB:Y00716, GB:Y00716, GB:X07523, GB:Z29665, GB:X07525, SP:P08603, PID:1335095, PID:1354770, PID:180473, PID:31965, PID:758073, GB:M17517, GB:Y00716, GB:Y00716, GB:X07523, GB:Z29665, GB:X07525, SP:P08603, PID:1335095, PID:1354770, PID:180473, PID:31965, and PID:758073; identified by sequence similarity NP_747410.1 identified by match to PFAM protein family HMM PF03466 NP_747411.1 catalyzes branch migration in Holliday junction intermediates NP_747412.1 identified by match to TIGR protein family HMM TIGR01737 NP_747414.1 similar to GB:L05425, and PID:179285; identified by sequence similarity NP_747415.1 identified by match to TIGR protein family HMM TIGR01508 NP_747416.1 identified by match to PFAM protein family HMM PF00301 NP_747418.1 similar to GP:9885819; identified by sequence similarity NP_747419.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway NP_747420.1 identified by match to PFAM protein family HMM PF03640 NP_747421.1 similar to GB:M23379, SP:P20936, PID:182972, PID:182974, PID:2294274, and PID:2294276; identified by sequence similarity NP_747422.1 similar to GB:J05252, SP:P16519, PID:189131, and PID:189652; identified by sequence similarity NP_747423.1 identified by match to PFAM protein family HMM PF03471 NP_747424.1 identified by match to PFAM protein family HMM PF01551 NP_747425.1 identified by match to PFAM protein family HMM PF00072 NP_747426.1 similar to SP:Q9Z410, and SP:Q9Z410; identified by sequence similarity NP_747427.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation NP_747428.1 similar to GP:4519571, and GP:9951688; identified by sequence similarity NP_747429.1 similar to GP:4519570, and GP:4519570; identified by sequence similarity NP_747430.1 similar to GP:4519569; identified by sequence similarity NP_747431.1 identified by match to PFAM protein family HMM PF04304 NP_747432.1 identified by match to PFAM protein family HMM PF01662 NP_747433.1 similar to GP:9951750, and GP:9951750; identified by sequence similarity NP_747435.1 identified by match to PFAM protein family HMM PF04226 NP_747436.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway NP_747437.1 Catalyzes a step in the de novo purine nucleotide biosynthetic pathway NP_747438.1 similar to GP:9951756; identified by sequence similarity NP_747439.1 catalyzes the formation of fumarate from aspartate NP_747440.1 identified by match to PFAM protein family HMM PF00165 NP_747441.1 similar to GB:X08058, GB:X08094, GB:X08095, GB:X08096, GB:X15480, GB:X06547, GB:M24485, GB:D28456, GB:U30897, GB:U62589, SP:P09211, PID:1575434, PID:2076717, PID:2204207, PID:31946, PID:31948, PID:579940, PID:598158, PID:726098, and PID:763405; identified by sequence similarity NP_747442.1 identified by match to PFAM protein family HMM PF01547 NP_747443.1 identified by match to TIGR protein family HMM TIGR01265 NP_747444.1 identified by match to PFAM protein family HMM PF04299 NP_747445.1 identified by match to TIGR protein family HMM TIGR01575 NP_747446.1 identified by match to PFAM protein family HMM PF00583 NP_747447.1 catalyzes the formation of oxaloacetate from pyruvate NP_747448.1 biotin carboxylase; with subunit B, the carboxyltansferase/biotincarboxyl carrier subunit catalyzes the formation of oxaloacetate from pyruvate NP_747449.1 identified by match to PFAM protein family HMM PF03466 NP_747451.1 identified by match to TIGR protein family HMM TIGR00441 NP_747452.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate NP_747453.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. NP_747454.1 similar to GP:9951866; identified by sequence similarity NP_747455.1 similar to GP:9951865; identified by sequence similarity NP_747456.1 identified by match to PFAM protein family HMM PF03601 NP_747457.1 identified by match to PFAM protein family HMM PF01662 NP_747458.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal NP_747460.1 identified by match to PFAM protein family HMM PF02492 NP_747462.1 similar to GP:9951874, GB:X59303, GB:X91861, SP:P26640, and PID:31545; identified by sequence similarity NP_747463.1 similar to GP:9951876; identified by sequence similarity NP_747464.1 similar to GP:48788, and GP:5805407; identified by sequence similarity NP_747465.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) NP_747466.1 similar to GB:J05070, SP:P14780, and PID:177205; identified by sequence similarity NP_747467.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide NP_747468.1 similar to SP:P25060, GB:X56183, and PID:45442; identified by sequence similarity NP_747469.1 identified by match to TIGR protein family HMM TIGR00900 NP_747470.1 similar to SP:P31586, PID:42189, SP:P31586, and PID:42189; identified by sequence similarity NP_747471.1 identified by match to PFAM protein family HMM PF01593 NP_747472.1 similar to GP:13358862; identified by sequence similarity NP_747473.1 similar to GP:10172815, SP:P27301, GB:U14003, PID:537186, GB:U00096, and PID:1790803; identified by sequence similarity NP_747474.1 identified by match to PFAM protein family HMM PF00355 NP_747475.1 similar to GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, and PID:507429; identified by sequence similarity NP_747476.1 similar to GB:L17326, and PID:306325; identified by sequence similarity NP_747477.1 similar to GP:12484570; identified by sequence similarity NP_747478.1 identified by match to PFAM protein family HMM PF04214 NP_747479.1 identified by match to PFAM protein family HMM PF00034 NP_747481.1 similar to GB:X12901, GB:A07400, GB:X04657, GB:A14103, SP:P09327, PID:1247443, PID:37843, PID:37845, PID:412172, and PID:579563; identified by sequence similarity NP_747484.1 similar to GP:6045171, GB:D11428, GB:M94048, GB:L03203, GB:X65968, GB:S61788, SP:Q01453, PID:182985, PID:190131, PID:220010, and PID:31653; identified by sequence similarity NP_747485.1 similar to GB:D13627, GB:Z37163, SP:P50990, PID:1136741, PID:286011, PID:992595, GB:D13627, GB:Z37163, SP:P50990, PID:1136741, PID:286011, and PID:992595; identified by sequence similarity NP_747486.1 similar to SP:P13509, GB:X52195, GB:M60470, GB:M63259, GB:M63260, GB:M63261, GB:M63262, SP:P20292, PID:182658, and PID:31426; identified by sequence similarity NP_747487.1 similar to GP:8388788, and SP:Q9ZHD0; identified by sequence similarity NP_747488.1 similar to GP:8388789; identified by sequence similarity NP_747490.1 identified by match to PFAM protein family HMM PF04140 NP_747493.1 similar to GB:X64062, SP:Q00637, PID:1335657, and PID:409457; identified by sequence similarity NP_747494.1 similar to GP:8388756; identified by sequence similarity NP_747495.1 similar to GB:S69137; identified by sequence similarity NP_747496.1 similar to GP:3414883, and GP:5824139; identified by sequence similarity NP_747497.1 similar to GP:4928612, and GP:6009406; identified by sequence similarity NP_747498.1 similar to GP:2773259, and GP:2773259; identified by sequence similarity NP_747502.1 identified by match to PFAM protein family HMM PF02146 NP_747504.1 similar to GB:L13740, SP:P22736, PID:1813882, and PID:292834; identified by sequence similarity NP_747505.1 similar to GB:M27382, PID:1552513, PID:292777, PID:37647, PID:493024, PID:563891, and PID:975609; identified by sequence similarity NP_747506.1 similar to SP:P13988; identified by sequence similarity NP_747507.1 similar to GP:2653997, GB:L11672, GB:M61871, SP:P17031, SP:P17040, SP:Q05481, PID:186774, PID:930083, and PID:930092; identified by sequence similarity NP_747509.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source NP_747510.1 identified by match to PFAM protein family HMM PF00455 NP_747511.1 identified by match to TIGR protein family HMM TIGR01173 NP_747512.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane NP_747513.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit NP_747514.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit NP_747515.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit NP_747516.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex NP_747517.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. NP_747518.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 NP_747519.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 NP_747520.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation