-- dump date   	20140620_013659
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_001746876.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_001746877.1	binds the polymerase to DNA and acts as a sliding clamp
YP_001746878.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_001746879.1	negatively supercoils closed circular double-stranded DNA
YP_001746880.1	KEGG: bur:Bcep18194_C6542 hypothetical protein
YP_001746881.1	PFAM: Integrase catalytic region; KEGG: bur:Bcep18194_C6543 hypothetical protein
YP_001746882.1	SMART: AAA ATPase; KEGG: bur:Bcep18194_C6544 hypothetical protein
YP_001746883.1	KEGG: pst:PSPTO_0030 hypothetical protein
YP_001746884.1	KEGG: pst:PSPTO_4755 hypothetical protein
YP_001746885.1	KEGG: pmy:Pmen_2213 hypothetical protein
YP_001746886.1	PFAM: protein of unknown function DUF411; KEGG: pmy:Pmen_2215 protein of unknown function DUF411
YP_001746887.1	KEGG: pmy:Pmen_2216 hypothetical protein
YP_001746888.1	PFAM: copper resistance B precursor; KEGG: pmy:Pmen_2217 copper resistance B precursor
YP_001746889.1	KEGG: psa:PST_3382 hypothetical protein
YP_001746890.1	TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pmy:Pmen_2219 copper-resistance protein, CopA family
YP_001746891.1	KEGG: pmy:Pmen_2220 hypothetical protein
YP_001746892.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psa:PST_3390 transcriptional activator CopR
YP_001746893.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pmy:Pmen_2235 heavy metal sensor signal transduction histidine kinase
YP_001746894.1	KEGG: pfo:Pfl_2393 hypothetical protein
YP_001746895.1	PFAM: outer membrane efflux protein; KEGG: pap:PSPA7_4013 heavy metal RND efflux outer membrane protein, CzcC family
YP_001746896.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pap:PSPA7_4014 heavy metal RND efflux membrane fusion protein, CzcB family
YP_001746897.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pap:PSPA7_4015 heavy metal efflux pump, CzcA family
YP_001746898.1	KEGG: pap:PSPA7_4016 heavy metal efflux system protein, putative
YP_001746899.1	KEGG: ajs:Ajs_1466 isoprenylcysteine carboxyl methyltransferase
YP_001746900.1	KEGG: ajs:Ajs_1465 hypothetical protein
YP_001746901.1	KEGG: ajs:Ajs_1464 hypothetical protein
YP_001746902.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: net:Neut_0066 40-residue YVTN family beta-propeller repeat protein
YP_001746903.1	PFAM: Heavy metal transport/detoxification protein; KEGG: pmy:Pmen_2225 heavy metal transport/detoxification protein
YP_001746904.1	KEGG: pmy:Pmen_2229 copper-translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein
YP_001746905.1	KEGG: pap:PSPA7_3842 probable transcriptional regulator
YP_001746906.1	KEGG: rso:RSc1705 hypothetical protein
YP_001746908.1	PFAM: Silent information regulator protein Sir2; thiamine pyrophosphate protein central region; KEGG: pst:PSPTO_4675 transcriptional regulator, Sir2 family
YP_001746909.1	KEGG: eba:ebA2473 hypothetical gene
YP_001746910.1	KEGG: asa:ASA_P4G008 hypothetical protein
YP_001746911.1	KEGG: bpt:Bpet0213 transposition protein, TnsC-related protein
YP_001746912.1	PFAM: transposase IS66; KEGG: pau:PA14_59580 putative transposase
YP_001746913.1	PFAM: IS66 Orf2 family protein; KEGG: pau:PA14_59570 putative transposase
YP_001746914.1	PFAM: transposase IS3/IS911 family protein; KEGG: pau:PA14_59560 putative transposase
YP_001746915.1	KEGG: pap:PSPA7_4526 hypothetical protein
YP_001746916.1	KEGG: sbn:Sbal195_4409 hypothetical protein
YP_001746917.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: pau:PA14_39020 hypothetical protein
YP_001746918.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pfl:PFL_5222 cobalt/cadmium/zinc transporter, CDF family
YP_001746919.1	KEGG: mms:mma_3055 hypothetical protein
YP_001746920.1	KEGG: psb:Psyr_4809 hypothetical protein
YP_001746921.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pmy:Pmen_1174 two component heavy metal response transcriptional regulator, winged helix family
YP_001746922.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_3148 heavy metal sensor histidine kinase
YP_001746925.1	PFAM: glycosyl transferase family 39; KEGG: pap:PSPA7_5537 hypothetical protein
YP_001746926.1	PFAM: glycosyl transferase family 2; KEGG: vha:VIBHAR_02791 hypothetical protein
YP_001746927.1	PFAM: GtrA family protein; KEGG: sde:Sde_0136 hypothetical protein
YP_001746928.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2828 transcriptional regulator, LysR family
YP_001746929.1	PFAM: phosphate-selective porin O and P; KEGG: pau:PA14_21620 phosphate-specific outer membrane porin OprP precursor
YP_001746933.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mes:Meso_4435 heavy metal translocating P-type ATPase
YP_001746934.1	KEGG: psp:PSPPH_4839 hypothetical protein
YP_001746935.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2024 RND divalent metal cation efflux transporter CzcA
YP_001746936.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2023 cobalt-zinc-cadmium resistance protein CzcB
YP_001746937.1	PFAM: outer membrane efflux protein; KEGG: pen:PSEEN2022 cobalt-zinc-cadmium resistance protein CzcC
YP_001746938.1	PFAM: outer membrane porin; KEGG: pen:PSEEN2340 porin, OprD family
YP_001746939.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_5221 DNA-binding heavy metal response regulator, putative
YP_001746940.1	KEGG: yen:YE1651 hypothetical protein
YP_001746942.1	KEGG: nwi:Nwi_0260 hypothetical protein
YP_001746944.1	KEGG: bxe:Bxe_B1530 hypothetical protein
YP_001746945.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN0005 sigma-54 dependent transcriptional regulator
YP_001746946.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN0007 metallo-beta-lactamase family protein
YP_001746947.1	PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN0008 hypothetical protein
YP_001746948.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN0009 hypothetical protein
YP_001746949.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0010 transcriptional regulator, LysR family
YP_001746950.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: pen:PSEEN0012 oxidoreductase, GMC family
YP_001746951.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN0013 major facilitator family transporter
YP_001746952.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pen:PSEEN0014 N-acylhomoserine lactone synthase
YP_001746953.1	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate
YP_001746954.1	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001746955.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001746956.1	KEGG: pen:PSEEN0018 3-methyl-adenine DNA glycosylase I, constitutive; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase
YP_001746957.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
YP_001746958.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN0021 hypothetical protein
YP_001746959.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_001746960.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: pen:PSEEN0023 ribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase)
YP_001746961.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
YP_001746962.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001746963.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pen:PSEEN0026 smf protein, DNA processing chain A
YP_001746964.1	PFAM: SUA5/yciO/yrdC domain; KEGG: pen:PSEEN0027 hypothetical protein
YP_001746965.1	KEGG: pen:PSEEN0028 hypothetical protein
YP_001746966.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN0029 quinone oxidoreductase, NADPH-dependent
YP_001746967.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_001746968.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_001746969.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN0032 sulfate transporter
YP_001746970.1	TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN0033 glycine betaine-binding protein
YP_001746971.1	TIGRFAM: choline-sulfatase; PFAM: sulfatase; KEGG: pen:PSEEN0034 choline sulfatase
YP_001746972.1	TIGRFAM: choline sulfate-utilization transcription factor; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0035 transcriptional regulator, LysR family
YP_001746973.1	KEGG: pfo:Pfl_0028 hypothetical protein
YP_001746974.1	PFAM: Dopa 45-dioxygenase; KEGG: pen:PSEEN0036 hypothetical protein
YP_001746975.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_001746976.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_001746977.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0039 transcriptional regulator TrpI
YP_001746978.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN0040 hypothetical protein
YP_001746979.1	PFAM: protein of unknown function DUF1458; KEGG: pen:PSEEN0041 hypothetical protein
YP_001746980.1	PFAM: protein of unknown function DUF1161; KEGG: pen:PSEEN0042 hypothetical protein
YP_001746981.1	PFAM: luciferase family protein; KEGG: pen:PSEEN0043 luciferase-like monooxygenase
YP_001746982.1	PFAM: OsmC family protein; KEGG: pap:PSPA7_0059 osmotically inducible protein OsmC
YP_001746983.1	PFAM: protein of unknown function DUF1161; KEGG: pen:PSEEN0044 hypothetical protein
YP_001746984.1	KEGG: pen:PSEEN0045 lipoprotein
YP_001746985.1	KEGG: pen:PSEEN0046 lipoprotein
YP_001746986.1	KEGG: pen:PSEEN0047 hypothetical protein
YP_001746987.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN0048 hydrolase, HAD family
YP_001746988.1	KEGG: pen:PSEEN0049 transferase
YP_001746989.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: pen:PSEEN0050 oligopeptidase A
YP_001746990.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0051 hypothetical protein
YP_001746991.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: pfo:Pfl_0088 oligopeptidase A
YP_001746992.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pen:PSEEN0052 hypothetical protein
YP_001746993.1	PFAM: carbonic anhydrase; KEGG: pen:PSEEN0053 carbonic anhydrase
YP_001746994.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN0054 sulfate transporter
YP_001746995.1	KEGG: gdi:GDI3666 hypothetical protein
YP_001746996.1	KEGG: pen:PSEEN0055 hypothetical protein
YP_001746997.1	TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: pen:PSEEN0056 cytochrome c oxidase, subunit II
YP_001746998.1	KEGG: pen:PSEEN0057 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001746999.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
YP_001747000.1	PFAM: cytochrome c oxidase subunit III; KEGG: pen:PSEEN0059 cytochrome c oxidase, subunit III
YP_001747001.1	KEGG: pen:PSEEN0060 hypothetical protein
YP_001747002.1	KEGG: pen:PSEEN0061 hypothetical protein
YP_001747003.1	KEGG: pen:PSEEN0062 hypothetical protein
YP_001747004.1	PFAM: cytochrome oxidase assembly; KEGG: pen:PSEEN0063 cytochrome oxidase assembly protein
YP_001747005.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_001747006.1	PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN0065 electron transport protein, Sco1/SenC family
YP_001747007.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5489 ABC transporter, periplasmic polyamine-binding protein
YP_001747008.1	PFAM: histone deacetylase superfamily; KEGG: pen:PSEEN5488 acetylpolyamine aminohydrolase
YP_001747009.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN5487 transcriptional regulator, AraC family
YP_001747010.1	catalyzes the formation of fumarate from aspartate
YP_001747011.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5481 transcriptional regulator, LysR family
YP_001747012.1	KEGG: pst:PSPTO_5497 hypothetical protein
YP_001747013.1	KEGG: pen:PSEEN5480 phosphoribosylaminoimidazole carboxylase, mutase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_001747014.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_001747015.1	PFAM: Transglycosylase-associated protein; KEGG: pen:PSEEN5478 hypothetical protein
YP_001747016.1	KEGG: pen:PSEEN5477 hypothetical protein
YP_001747017.1	PFAM: Aldose 1-epimerase; KEGG: pen:PSEEN5476 aldose 1-epimerase
YP_001747018.1	PFAM: thioesterase superfamily protein; KEGG: pfo:Pfl_5617 thioesterase superfamily
YP_001747019.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN5474 permease (MFS superfamily)
YP_001747020.1	TIGRFAM: phosphate binding protein; KEGG: pen:PSEEN5473 phosphate ABC transporter, periplasmic phosphate-binding protein
YP_001747021.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5472 phosphate ABC transporter, permease protein
YP_001747022.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5471 phosphate ABC transporter, permease protein
YP_001747023.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_001747024.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: pen:PSEEN5469 transcriptional repressor for high affinity phosphate uptake
YP_001747025.1	PFAM: response regulator receiver; KEGG: pen:PSEEN5468 response regulator
YP_001747026.1	PFAM: peptidase M23B; KEGG: pen:PSEEN5467 peptidase, M23/M37 family
YP_001747027.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: pen:PSEEN5466 metal ion transporter
YP_001747028.1	KEGG: pen:PSEEN5465 phosphate regulon sensor protein PhoR; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001747029.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN5464 phosphate regulon transcriptional regulatory protein PhoB
YP_001747030.1	PFAM: Secreted repeat of unknown function; KEGG: pen:PSEEN5463 hypothetical protein
YP_001747031.1	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway
YP_001747032.1	PFAM: Chorismate lyase; KEGG: pen:PSEEN5461 chorismate-pyruvate lyase
YP_001747033.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pen:PSEEN5460 rubredoxin
YP_001747034.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN5459 rubredoxin-NAD(+) reductase
YP_001747035.1	PFAM: histone family protein DNA-binding protein; KEGG: pen:PSEEN5458 DNA-binding protein HU-alpha
YP_001747036.1	KEGG: pen:PSEEN5457 hypothetical protein
YP_001747037.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN5456 hypothetical protein
YP_001747038.1	catalyzes branch migration in Holliday junction intermediates
YP_001747039.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5454 transcriptional regulator, LysR family
YP_001747040.1	TIGRFAM: TonB family protein; KEGG: pen:PSEEN5453 ferric siderophore transport system, periplasmic binding protein TonB
YP_001747041.1	membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell
YP_001747042.1	TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: pen:PSEEN5451 solvent/drug/ferric siderophore transport protein ExbB
YP_001747043.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pen:PSEEN5450 hypothetical protein
YP_001747044.1	KEGG: pen:PSEEN5449 lipoprotein
YP_001747045.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: pen:PSEEN5448 endoribonuclease L-PSP
YP_001747046.1	KEGG: pen:PSEEN5447 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_001747047.1	Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_001747048.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5445 transcriptional regulator, LysR family
YP_001747049.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN5444 glutamine synthetase
YP_001747050.1	PFAM: peptidase C26; KEGG: pen:PSEEN5443 glutamine amidotransferase
YP_001747051.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN5442 amino acid transporter
YP_001747052.1	Essential for recycling GMP and indirectly, cGMP
YP_001747053.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: pen:PSEEN5440 hypothetical protein
YP_001747054.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_001747055.1	TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pen:PSEEN5437 catabolite repression control protein Crc
YP_001747056.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001747057.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_001747058.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: pen:PSEEN5434 phosphomannomutase
YP_001747059.1	catalyzes the formation of dUMP from dUTP
YP_001747060.1	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine
YP_001747061.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_001747062.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN5430 periplasmic binding protein
YP_001747063.1	required for 70S ribosome assembly
YP_001747064.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_001747066.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: pen:PSEEN5425 hypothetical protein
YP_001747067.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN5424 aldehyde dehydrogenase
YP_001747068.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN5423 major facilitator family transporter
YP_001747069.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: pen:PSEEN5422 phospholipase D/transphosphatidylase
YP_001747070.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN5421 transcriptional regulator, GntR family
YP_001747071.1	KEGG: pen:PSEEN5420 hypothetical protein
YP_001747072.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN5419 oxidoreductase; D-amino acid dehydrogenase
YP_001747073.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN5418 hypothetical protein
YP_001747074.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN5417 leucine-responsive regulatory protein
YP_001747075.1	catalyzes the oxidative deamination of D-amino acids
YP_001747076.1	catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA
YP_001747077.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN5414 transcriptional regulator
YP_001747078.1	KEGG: pfo:Pfl_5522 cytochrome c5
YP_001747079.1	KEGG: pen:PSEEN5412 hypothetical protein
YP_001747080.1	Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine
YP_001747081.1	TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: pen:PSEEN5410 ATP-dependent DNA helicase
YP_001747082.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pen:PSEEN5409 diguanylate cyclase (GGDEF domain)
YP_001747083.1	functions as a Na(+)/drug antiporter
YP_001747084.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5407 transcriptional regulator, LysR family
YP_001747085.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5406 methyl-accepting chemotaxis transducer
YP_001747086.1	PFAM: protein of unknown function DUF1338; KEGG: pen:PSEEN5405 hypothetical protein
YP_001747087.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5404 transcriptional regulator, LysR family
YP_001747088.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN5402 probable aldehyde dehydrogenase
YP_001747089.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN5401 oxidoreductase, FAD-binding
YP_001747090.1	KEGG: pen:PSEEN5400 small-conductance mechanosensitive channel
YP_001747091.1	KEGG: hch:HCH_04153 permease of the major facilitator superfamily
YP_001747092.1	KEGG: pfo:Pfl_5213 hypothetical protein
YP_001747093.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN5397 isochorismatase
YP_001747094.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pen:PSEEN5396 hypothetical protein
YP_001747095.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN5395 hydrolase, alpha/beta fold family
YP_001747096.1	PFAM: Amidohydrolase 3; KEGG: pen:PSEEN5394 puttaive metal-dependent hydrolase; amidohydrolase family
YP_001747097.1	KEGG: pen:PSEEN5347 hypothetical protein
YP_001747098.1	KEGG: pen:PSEEN0406 hypothetical protein
YP_001747099.1	PFAM: outer membrane porin; KEGG: pfo:Pfl_2708 outer membrane porin
YP_001747100.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5393 transcriptional regulator, LysR family
YP_001747101.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pen:PSEEN5389 glutathione-regulated potassium-proton antiporter
YP_001747102.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pfo:Pfl_1956 transcriptional regulator, AraC family
YP_001747103.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl_1960 transcriptional regulator, AraC family
YP_001747104.1	PFAM: isochorismatase hydrolase; KEGG: pfo:Pfl_2298 isochorismatase hydrolase
YP_001747105.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: serine/threonine protein kinase; KEGG: rme:Rmet_5309 ATP-binding region, ATPase-like protein
YP_001747106.1	PFAM: regulatory protein LuxR; response regulator receiver; transcriptional regulator domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rpa:RPA2109 two-component transcriptional regulator, LuxR family
YP_001747107.1	PFAM: response regulator receiver; KEGG: pfo:Pfl_2250 response regulator receiver domain protein (CheY)
YP_001747108.1	KEGG: psb:Psyr_2230 Mn2+/Fe2+ transporter, NRAMP family
YP_001747109.1	KEGG: pen:PSEEN5386 hypothetical protein
YP_001747110.1	KEGG: pen:PSEEN5385 magnesium chelatase subunit D; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001747111.1	KEGG: pen:PSEEN5383 hypothetical protein
YP_001747112.1	PFAM: protein of unknown function DUF526; KEGG: pen:PSEEN5377 hypothetical protein
YP_001747113.1	PFAM: nitrogen regulatory protein P-II; KEGG: pen:PSEEN5376 nitrogen regulatory protein P-II
YP_001747114.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: pen:PSEEN5375 ammonium transporter
YP_001747115.1	KEGG: pen:PSEEN5374 hypothetical protein
YP_001747116.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN5369 haloacid dehalogenase-like hydrolase
YP_001747117.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_001747118.1	PFAM: protein of unknown function DUF484; KEGG: pen:PSEEN5367 hypothetical protein
YP_001747119.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_001747120.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pen:PSEEN5365 diaminopimelate decarboxylase
YP_001747121.1	KEGG: pen:PSEEN5364 lipoprotein Lppl
YP_001747122.1	defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly
YP_001747123.1	PFAM: protein of unknown function DUF1289; KEGG: pen:PSEEN5362 hypothetical protein
YP_001747124.1	Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation
YP_001747125.1	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP
YP_001747126.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN5358 hypothetical protein
YP_001747127.1	KEGG: pen:PSEEN5357 hypothetical protein
YP_001747128.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN5356 glutathione S-transferase
YP_001747129.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_001747130.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: pen:PSEEN5354 alginate biosynthesis regulatory protein
YP_001747131.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_001747132.1	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane
YP_001747133.1	PFAM: protein of unknown function DUF513 hemX; KEGG: pen:PSEEN5351 uroporphyrin-III C-methyltransferase HemX
YP_001747134.1	PFAM: HemY domain protein; KEGG: pen:PSEEN5350 HemY protein
YP_001747135.1	PFAM: Disulphide bond formation protein DsbB; KEGG: pen:PSEEN0158 disulfide bond formation protein B1 (disulfide oxidoreductase 1)
YP_001747136.1	binds specifically to the major sigma factor sigma 70; active in stationary phase
YP_001747137.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN0160 peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_001747138.1	KEGG: pen:PSEEN0161 alginate regulatory protein AlgP
YP_001747139.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0162 hypothetical protein
YP_001747140.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0163 ABC transporter, ATP-binding protein
YP_001747141.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN0165 transporter, LysE family
YP_001747142.1	PFAM: band 7 protein; KEGG: pen:PSEEN0166 hypothetical protein
YP_001747143.1	PFAM: protein of unknown function DUF107; KEGG: pen:PSEEN0167 hypothetical protein
YP_001747144.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pen:PSEEN0168 hypothetical protein
YP_001747145.1	KEGG: pen:PSEEN0169 hypothetical protein
YP_001747146.1	KEGG: pen:PSEEN0170 hypothetical protein
YP_001747147.1	PFAM: CBS domain containing protein; KEGG: pen:PSEEN0171 hypothetical protein
YP_001747148.1	KEGG: pen:PSEEN0172 dipeptidase; TIGRFAM: dipeptidase; PFAM: peptidase M20
YP_001747149.1	KEGG: pen:PSEEN5304 hypothetical protein
YP_001747150.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN5303 transcriptional regulator, AsnC family
YP_001747151.1	PFAM: adenylate cyclase; KEGG: pen:PSEEN5302 adenylate cyclase
YP_001747152.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis
YP_001747153.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
YP_001747154.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN5299 glutamine synthetase
YP_001747155.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN5297 glutamine synthetase
YP_001747156.1	PFAM: aminotransferase class-III; KEGG: pen:PSEEN5296 aminotransferase, class III
YP_001747157.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5295 putrescine ABC transporter, periplasmic putrescine-binding protein
YP_001747158.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5294 putrescine ABC transporter, periplasmic putrescine-binding protein
YP_001747159.1	KEGG: pen:PSEEN5293 puttaive putrescine ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001747160.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5292 putrescine ABC transporter, permease protein
YP_001747161.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5291 putrescine ABC transporter, permease protein
YP_001747162.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN5289 multidrug RND transporter, membrane fusion protein
YP_001747163.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN5288 multidrug RND transporter, membrane fusion protein
YP_001747164.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN5287 Acr-type multidrug efflux transporter (RND family)
YP_001747165.1	KEGG: pfo:Pfl_0193 hypothetical protein
YP_001747166.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5284 sulfate/thiosulfate import ABC transporter, periplasmic sulfate-binding protein
YP_001747167.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5283 sulfate/thiosulfate import ABC transporter, membrane protein
YP_001747168.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5282 sulfate/thiosulfate import ABC transporter, membrane protein
YP_001747169.1	KEGG: pen:PSEEN5281 sulfate/thiosulfate import ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001747170.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: pen:PSEEN5280 TonB-like protein
YP_001747171.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: pen:PSEEN5279 biopolymer transport protein ExbB
YP_001747172.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pen:PSEEN5278 biopolymer transport protein ExbD/TolR
YP_001747173.1	PFAM: protein of unknown function DUF1234; KEGG: pen:PSEEN5264 hypothetical protein
YP_001747174.1	PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: pen:PSEEN5263 sigma-54 dependent transcriptional regulator
YP_001747175.1	PFAM: NLPA lipoprotein; KEGG: pen:PSEEN5262 lipoprotein
YP_001747176.1	PFAM: peptidase S45 penicillin amidase; KEGG: pen:PSEEN5257 penicillin amidase
YP_001747177.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: pen:PSEEN5256 acetyltransferase
YP_001747178.1	KEGG: pen:PSEEN5255 hypothetical protein
YP_001747179.1	KEGG: pen:PSEEN5254 lipase
YP_001747180.1	KEGG: pen:PSEEN5253 hypothetical protein
YP_001747181.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: pen:PSEEN5252 oxidoreductase, 2OG-Fe(II) oxygenase family
YP_001747182.1	PFAM: protein of unknown function DUF523; KEGG: pfo:Pfl_5390 protein of unknown function DUF523
YP_001747183.1	KEGG: pen:PSEEN5250 periplasmic binding protein from ABC-type transporter
YP_001747184.1	KEGG: pen:PSEEN5249 hypothetical protein
YP_001747185.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_001747186.1	PFAM: FAD linked oxidase domain protein; KEGG: pen:PSEEN5247 FAD/FMN-containing dehydrogenase
YP_001747187.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pen:PSEEN5246 fumarylacetoacetate (FAA) hydrolase
YP_001747188.1	PFAM: NHL repeat containing protein; SdiA-regulated domain protein; KEGG: pen:PSEEN5245 hypothetical protein
YP_001747189.1	PFAM: SdiA-regulated domain protein; KEGG: pen:PSEEN5244 hypothetical protein
YP_001747190.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_001747191.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_001747192.1	KEGG: pen:PSEEN5241 hypothetical protein
YP_001747193.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN5240 hydrolase, haloacid dehalogenase-like family
YP_001747194.1	hydrolyzes diadenosine polyphosphate
YP_001747195.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: pen:PSEEN5238 phosphoenolpyruvate-protein phosphotransferase
YP_001747196.1	PFAM: protein of unknown function DUF833; KEGG: pen:PSEEN5237 hypothetical protein
YP_001747197.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN5236 hypothetical protein
YP_001747198.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_001747199.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_001747200.1	TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN5233 transcriptional regulator CadR
YP_001747201.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pen:PSEEN5232 cadmium translocating P-type ATPase
YP_001747202.1	TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5231 transcriptional regulator, LysR family
YP_001747203.1	KEGG: pen:PSEEN0267 ABC transporter, ATP-binding protein; TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding protein component; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001747204.1	TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0268 ABC transporter, permease protein
YP_001747205.1	TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN0269 ABC transporter, periplasmic binding protein
YP_001747206.1	PFAM: GTP-binding protein HSR1-related; KEGG: pen:PSEEN0271 hypothetical protein
YP_001747207.1	KEGG: pen:PSEEN0272 hypothetical protein
YP_001747208.1	PFAM: dihydrofolate reductase region; KEGG: pen:PSEEN0273 dihydrofolate reductase type I, trimethoprim resistance
YP_001747209.1	PFAM: sodium:dicarboxylate symporter; KEGG: pen:PSEEN0277 sodium:dicarboxylate symporter
YP_001747210.1	KEGG: pen:PSEEN0278 hypothetical protein
YP_001747211.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_001747212.1	PFAM: CBS domain containing protein; MgtE integral membrane region; KEGG: noc:Noc_1785 divalent cation transporter
YP_001747213.1	KEGG: pen:PSEEN0284 hypothetical protein
YP_001747214.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN0286 hypothetical protein
YP_001747215.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_001747216.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pen:PSEEN0289 ferredoxin 4Fe-4S
YP_001747217.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_001747218.1	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: pen:PSEEN0291 oxidoreductase, GMC family
YP_001747219.1	KEGG: pen:PSEEN0292 hypothetical protein
YP_001747220.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN0293 coniferyl aldehyde dehydrogenase (CALDH)
YP_001747221.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN0294 transcriptional regulator, TetR family
YP_001747222.1	PFAM: Rhodanese domain protein; KEGG: pen:PSEEN0295 thiosulfate sulfurtransferase (rhodanese-like protein)
YP_001747223.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN0296 hydrolase, alpha/beta superfamily
YP_001747224.1	PFAM: peptidase M16 domain protein; KEGG: psa:PST_3994 predicted Zn-dependent peptidase
YP_001747225.1	PFAM: peptidase M16 domain protein; KEGG: pmy:Pmen_4176 peptidase M16 domain protein
YP_001747226.1	TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0297 methyltransferase
YP_001747227.1	PFAM: peptidase M16 domain protein; KEGG: pen:PSEEN0298 zinc-dependent peptidase, M16 family
YP_001747228.1	PFAM: peptidase M16 domain protein; KEGG: pen:PSEEN0299 zinc-dependent peptidase, M16 family
YP_001747229.1	KEGG: pen:PSEEN0300 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001747230.1	KEGG: pen:PSEEN0301 cell division ATP binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001747231.1	PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN0302 cell division protein FtsX
YP_001747232.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_001747233.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
YP_001747234.1	PFAM: protein of unknown function DUF423; KEGG: pen:PSEEN0305 hypothetical protein
YP_001747235.1	with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate
YP_001747236.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_001747237.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_001747238.1	KEGG: pen:PSEEN0310 hypothetical protein
YP_001747239.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001747240.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_001747241.1	KEGG: pen:PSEEN0313 hypothetical protein
YP_001747242.1	TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN0314 methionine biosynthesis protein MetW
YP_001747243.1	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine
YP_001747244.1	PFAM: protein of unknown function YGGT; KEGG: pen:PSEEN0316 hypothetical protein
YP_001747245.1	catalyzes the formation of L-proline from pyrroline-5-carboxylate
YP_001747246.1	PFAM: alanine racemase domain protein; KEGG: pen:PSEEN0318 hypothetical protein
YP_001747247.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: pen:PSEEN0319 type IV pili twitching motility protein PilT
YP_001747248.1	PFAM: NLP/P60 protein; KEGG: pen:PSEEN0320 hypothetical protein
YP_001747249.1	PFAM: TM2 domain containing protein?; KEGG: pen:PSEEN0321 hypothetical protein
YP_001747250.1	PFAM: Sporulation domain protein; KEGG: pen:PSEEN0322 hypothetical protein
YP_001747251.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_001747252.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
YP_001747253.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_001747254.1	PFAM: nuclease (SNase domain protein); KEGG: pen:PSEEN0326 nuclease, staphylococcal nuclease homologue
YP_001747255.1	PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: pen:PSEEN0327 bifunctional protein (MaeB) [includes: malic oxidoreductase N-terminal; phosphotransacetylase C-terminal]
YP_001747256.1	KEGG: pen:PSEEN0328 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001747257.1	KEGG: pau:PA14_07480 putative reverse transcriptase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; SMART: HNH nuclease
YP_001747258.1	KEGG: pen:PSEEN0330 type IV pili biogenesis protein PilM
YP_001747259.1	PFAM: Fimbrial assembly family protein; KEGG: pen:PSEEN0331 type IV pili biogenesis protein PilN
YP_001747260.1	KEGG: pen:PSEEN0332 type IV pili biogenesis protein PilP
YP_001747261.1	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: pen:PSEEN0333 type IV pili biogenesis protein PilQ
YP_001747262.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_001747263.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_001747264.1	PFAM: Sporulation domain protein; KEGG: pen:PSEEN0336 hypothetical protein
YP_001747265.1	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate
YP_001747266.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_001747267.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_001747268.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0340 hypothetical protein
YP_001747269.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0341 transporter, MFS superfamily
YP_001747270.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0342 transcriptional regulator, LysR family
YP_001747271.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN0365 chromosome partitioning protein, ParA family
YP_001747272.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pen:PSEEN0368 thioredoxin
YP_001747273.1	PFAM: protein of unknown function UPF0061; KEGG: pen:PSEEN0369 hypothetical protein
YP_001747274.1	small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS
YP_001747275.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
YP_001747276.1	catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine
YP_001747277.1	catalyzes the formation of betaine from betaine aldehyde
YP_001747278.1	HTH-type; bet1; Repressor involved in choline regulation of the bet genes
YP_001747279.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: pen:PSEEN0375 choline transporter BetT
YP_001747280.1	KEGG: pen:PSEEN0376 hypothetical protein
YP_001747281.1	PFAM: protein of unknown function DUF610 YibQ; KEGG: pen:PSEEN0377 hypothetical protein
YP_001747282.1	KEGG: pen:PSEEN0378 carboxy-terminal processing protease precursor; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001747283.1	PFAM: peptidase M23B; KEGG: pen:PSEEN0379 metalloendopeptidase, M23/M37 family
YP_001747284.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_001747285.1	PFAM: Rhodanese domain protein; KEGG: pen:PSEEN0381 hypothetical protein
YP_001747286.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: pen:PSEEN0382 glutaredoxin
YP_001747287.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_001747288.1	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pen:PSEEN0384 RNA methyltransferase, TrmH family, group 2
YP_001747289.1	KEGG: pen:PSEEN0385 hypothetical protein
YP_001747290.1	KEGG: pen:PSEEN0386 two-component response regulator NtrC; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001747291.1	KEGG: pen:PSEEN0387 sensory box histidine kinase NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001747292.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: pfl:PFL_0386 glutamine synthetase, type I
YP_001747293.1	Required for the synthesis of the thiazole moiety
YP_001747294.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: pen:PSEEN0392 regulatory protein TypA
YP_001747295.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN5108 hypothetical protein
YP_001747296.1	KEGG: pen:PSEEN5107 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_001747297.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_001747298.1	PFAM: protein of unknown function DUF924; KEGG: pen:PSEEN5105 hypothetical protein
YP_001747299.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5104 methyl-accepting chemotaxis transducer
YP_001747300.1	KEGG: pen:PSEEN5103 lipoprotein
YP_001747301.1	PFAM: Lipocalin family protein; KEGG: pen:PSEEN5102 outer membrane lipoprotein Blc
YP_001747302.1	catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate
YP_001747303.1	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pen:PSEEN5099 histidine utilization repressor
YP_001747304.1	PFAM: protein of unknown function DUF886; KEGG: pen:PSEEN5098 hypothetical protein
YP_001747305.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_001747306.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_001747307.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN5095 amino acid transporter
YP_001747308.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_001747309.1	PFAM: N-formylglutamate amidohydrolase; KEGG: pen:PSEEN5093 N-formylglutamate amidohydrolase
YP_001747310.1	PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: psb:Psyr_1302 leucine-rich repeat
YP_001747311.1	KEGG: pen:PSEEN5092 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold
YP_001747312.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_001747313.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_001747314.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_001747315.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pen:PSEEN5087 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001747316.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5086 amino acid ABC transporter, permease protein
YP_001747317.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN5085 amino acid ABC transporter, ATP-binding protein
YP_001747318.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5084 methyl-accepting chemotaxis transducer
YP_001747319.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5082 methyl-accepting chemotaxis transducer
YP_001747320.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_001747321.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: pen:PSEEN5080 twin aqrginine translocase protein subunit C
YP_001747322.1	Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif
YP_001747323.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_001747324.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
YP_001747325.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
YP_001747326.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: pen:PSEEN5075 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
YP_001747327.1	PFAM: Sterol-binding domain protein; KEGG: pen:PSEEN5074 hypothetical protein
YP_001747328.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
YP_001747329.1	TIGRFAM: polyhydroxyalkanoic acid system protein; PFAM: Putative polyhydroxyalkanoic acid system protein; KEGG: pen:PSEEN5072 hypothetical protein
YP_001747330.1	TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: pen:PSEEN5071 polyhydroxyalkanoate granule-associated protein GA1
YP_001747331.1	TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: pen:PSEEN5070 polyhydroxyalkanoate synthesis protein PhaF
YP_001747332.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN5069 transcriptional regulator, TetR family
YP_001747333.1	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class II; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: pen:PSEEN5068 poly(3-hydroxyalkanoate) polymerase 2
YP_001747334.1	TIGRFAM: poly(3-hydroxyalkanoate) depolymerase; PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN5067 poly(3-hydroxyalkanoate) depolymerase
YP_001747335.1	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class II; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: pen:PSEEN5066 poly(3-hydroxyalkanoate) polymerase 1
YP_001747336.1	PFAM: protein of unknown function DUF971; KEGG: pen:PSEEN5065 hypothetical protein
YP_001747337.1	heat shock protein involved in degradation of misfolded proteins
YP_001747338.2	heat shock protein involved in degradation of misfolded proteins
YP_001747339.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_001747340.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_001747341.1	regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity
YP_001747342.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_001747343.1	PFAM: protein of unknown function DUF179; KEGG: pen:PSEEN5058 hypothetical protein
YP_001747344.1	TIGRFAM: TonB family protein; KEGG: pen:PSEEN5057 hypothetical protein
YP_001747345.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_001747346.1	PFAM: response regulator receiver; KEGG: pen:PSEEN5055 type IV pili response regulator PilG
YP_001747347.1	PFAM: response regulator receiver; KEGG: pen:PSEEN5054 type IV pili response regulator PilH
YP_001747348.1	PFAM: CheW domain protein; KEGG: pen:PSEEN5053 type IV pili signal transduction protein PilI
YP_001747349.1	PFAM: chemotaxis sensory transducer; KEGG: pen:PSEEN5052 type IV pili methyl-accepting chemotaxis transducer PilJ
YP_001747350.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: pen:PSEEN5051 sensor histidine kinase/response regulator ChpA
YP_001747351.1	PFAM: CheW domain protein; KEGG: pen:PSEEN5050 chemotaxis protein
YP_001747352.1	TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: pen:PSEEN5049 hemolysin III
YP_001747353.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_001747354.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
YP_001747355.1	KEGG: pen:PSEEN5046 hypothetical protein
YP_001747356.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: pen:PSEEN5045 flavin-containing monamine oxidase family protein
YP_001747357.1	PFAM: cytochrome B561; KEGG: pen:PSEEN5044 cytochrome, b561 family
YP_001747358.1	PFAM: YceI family protein; KEGG: pen:PSEEN5043 hypothetical protein
YP_001747359.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN5042 ATP-dependent RNA helicase RhlE, DEAD box family
YP_001747360.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN5040 periplasmic binding protein
YP_001747361.1	KEGG: pae:PA0429 hypothetical protein
YP_001747362.1	KEGG: pen:PSEEN5038 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_001747363.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_001747364.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN5034 long-chain acyl-CoA thioester hydrolase family protein
YP_001747365.1	PFAM: sodium/hydrogen exchanger; KEGG: pen:PSEEN5033 Na+/H+ antiporter
YP_001747366.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN5032 hypothetical protein
YP_001747367.1	KEGG: pen:PSEEN5031 hypothetical protein
YP_001747368.1	PFAM: MltA domain protein; 3D domain protein; KEGG: pen:PSEEN5030 outer membrane-bound lytic murein transglycolase A
YP_001747369.1	PFAM: cytochrome c prime; KEGG: pen:PSEEN5029 cytochrome c'
YP_001747370.1	PFAM: protein of unknown function DUF1090; KEGG: pen:PSEEN5028 hypothetical protein
YP_001747371.1	PFAM: protein of unknown function DUF1090; KEGG: pen:PSEEN5028 hypothetical protein
YP_001747372.1	this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+
YP_001747373.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_001747374.1	PFAM: regulatory protein ArsR; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN5025 transcriptional regulator, ArsR family
YP_001747375.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_001747376.1	KEGG: pen:PSEEN5023 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: D-erythrose-4-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001747377.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_001747378.1	KEGG: pen:PSEEN5021 hypothetical protein
YP_001747379.1	KEGG: pen:PSEEN5020 lipoprotein
YP_001747380.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_001747381.1	KEGG: pen:PSEEN5017 sensory box protein/response regulator (hybrid); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001747382.1	PFAM: protein of unknown function DUF45; KEGG: pen:PSEEN5016 hypothetical protein
YP_001747383.1	KEGG: pen:PSEEN5015 hypothetical protein
YP_001747384.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN5011 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001747385.1	TIGRFAM: hypothetical membrane protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: pen:PSEEN5010 hypothetical protein
YP_001747386.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN5009 hypothetical protein
YP_001747387.1	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA
YP_001747388.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN5007 drug resistance transporter, EmrB/QacA family
YP_001747389.1	KEGG: pen:PSEEN5006 hypothetical protein
YP_001747390.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: pen:PSEEN5005 peptidase, TldD/PmbA family
YP_001747391.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pen:PSEEN5004 probable acyl-CoA dehydrogenase
YP_001747392.1	KEGG: kpn:KPN_00712 putative arginine/ornithine antiporter
YP_001747393.1	KEGG: pen:PSEEN4574 hypothetical protein
YP_001747394.1	KEGG: pen:PSEEN0872 hypothetical protein
YP_001747395.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein
YP_001747396.1	TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: pen:PSEEN4998 major sodium:proline symporter (SSS family)
YP_001747397.1	PFAM: protein of unknown function DUF519; KEGG: pen:PSEEN4997 hypothetical protein
YP_001747398.1	PFAM: Carbamoyltransferase; KEGG: pen:PSEEN4996 carbamoyltransferase, NodU family
YP_001747399.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN4995 glycosyl transferase
YP_001747400.1	PFAM: Mig-14 family protein; KEGG: pen:PSEEN4994 hypothetical protein
YP_001747401.1	PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein
YP_001747402.1	KEGG: pen:PSEEN4992 hypothetical protein
YP_001747403.1	KEGG: pen:PSEEN4991 hypothetical protein
YP_001747404.1	KEGG: pen:PSEEN4989 toluene tolerance protein Ttg8
YP_001747405.1	KEGG: pen:PSEEN4987 lipid A export ATP-binding/permease protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001747406.1	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose
YP_001747407.1	KEGG: pen:PSEEN4985 hypothetical protein
YP_001747408.1	PFAM: aldo/keto reductase; KEGG: pen:PSEEN4984 oxidoreductase, aldo/keto reductase family
YP_001747409.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN4983 oxidase, FAD-binding
YP_001747410.1	PFAM: small multidrug resistance protein; KEGG: pen:PSEEN4982 multidrug efflux SMR transporter
YP_001747411.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4981 transcriptional regulator, LysR family
YP_001747412.1	catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A
YP_001747413.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pfl:PFL_4913 transcriptional regulator, GntR family
YP_001747414.1	KEGG: fal:FRAAL4688 putative clavaminate synthase-like (oxidase)
YP_001747415.1	PFAM: protein of unknown function DUF81; KEGG: fno:Fnod_1043 protein of unknown function DUF81
YP_001747416.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pmu:PM0579 oxidoreductase, short chain dehydrogenase/reductase, putative
YP_001747417.1	PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: pen:PSEEN0563 formate dehydrogenase-O, major subunit
YP_001747418.1	KEGG: pen:PSEEN0564 formate dehydrogenase-N major subunit, anaerobic; selenopeptide; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region
YP_001747419.1	TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: pen:PSEEN0565 formate dehydrogenase-O, Fe-S subunit
YP_001747420.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: pen:PSEEN0566 formate dehydrogenase-O, cytochrome b556 (FDO) subunit
YP_001747421.1	TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: pen:PSEEN0567 formate dehydrogenase formation protein
YP_001747422.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
YP_001747423.1	TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: pen:PSEEN0569 selenocysteinyl-tRNA-specific translation factor
YP_001747424.1	PFAM: Asparaginase/glutaminase; KEGG: pen:PSEEN0570 L-asparaginase, type I
YP_001747425.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: pen:PSEEN0571 sodium/alanine symporter
YP_001747426.1	KEGG: pen:PSEEN0572 transcriptional regulator, Cro/CI family
YP_001747427.1	PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: pen:PSEEN0574 dTDP-4-rhamnose reductase-related protein
YP_001747428.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: pen:PSEEN0575 NAD-dependent epimerase/dehydratase family protein
YP_001747429.1	PFAM: helix-turn-helix HxlR type; KEGG: pen:PSEEN0576 hypothetical protein
YP_001747430.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0577 transport protein, MFS superfamily
YP_001747431.1	PFAM: OmpW family protein; KEGG: pen:PSEEN0578 outer membrane protein OprG
YP_001747432.1	KEGG: pen:PSEEN0579 lipoprotein
YP_001747433.1	PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN0580 ABC efflux transporter, permease protein
YP_001747434.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0581 ABC transporter, ATP binding component
YP_001747435.1	KEGG: pen:PSEEN0582 hypothetical protein
YP_001747436.1	KEGG: pen:PSEEN0583 hypothetical protein
YP_001747437.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pen:PSEEN0584 thioredoxin
YP_001747438.1	PFAM: methyltransferase small; Methyltransferase type 12; KEGG: pen:PSEEN0585 hypothetical protein
YP_001747439.1	KEGG: pen:PSEEN0586 hypothetical protein
YP_001747440.1	PFAM: ATP-cone domain protein; KEGG: pen:PSEEN0587 hypothetical protein
YP_001747441.1	KEGG: pen:PSEEN0588 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein
YP_001747442.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_001747443.1	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis
YP_001747444.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_001747445.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_001747446.1	catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP
YP_001747447.1	PFAM: phosphatidylglycerophosphatase A; KEGG: pen:PSEEN0594 phosphatidylglycerophosphatase A
YP_001747448.1	KEGG: pen:PSEEN0595 hypothetical protein
YP_001747449.1	catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate
YP_001747450.1	KEGG: pen:PSEEN0597 hypothetical protein
YP_001747451.1	PFAM: periplasmic binding protein; KEGG: pen:PSEEN0598 periplasmic cobalamin-binding protein HutB
YP_001747452.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN0599 cobalamine TonB-dependent receptor
YP_001747453.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_001747454.1	PFAM: Polyprenyl synthetase; KEGG: pen:PSEEN0601 geranyltranstransferase
YP_001747455.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
YP_001747456.1	DHBP synthase; functions during riboflavin biosynthesis
YP_001747457.1	PFAM: putative esterase; KEGG: pen:PSEEN0617 hypothetical protein
YP_001747458.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pae:PA2687 two-component sensor PfeS
YP_001747459.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pae:PA2686 two-component response regulator PfeR
YP_001747460.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: csa:Csal_2539 TonB-dependent siderophore receptor
YP_001747461.1	KEGG: pen:PSEEN3675 hypothetical protein
YP_001747462.1	KEGG: pen:PSEEN2484 hypothetical protein
YP_001747463.1	KEGG: pen:PSEEN0625 transcriptional regulator
YP_001747464.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_001747465.1	PFAM: protein of unknown function DUF980; KEGG: pen:PSEEN0627 zinc-dependent peptidase (M family)
YP_001747466.1	PFAM: SNARE associated Golgi protein; KEGG: pen:PSEEN0628 hypothetical protein
YP_001747467.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0630 acetyltransferase, GNAT family
YP_001747468.1	catalyzes the formation of acetaldehyde from ethanolamine
YP_001747469.1	PFAM: Ethanolamine ammonia lyase large subunit; KEGG: pen:PSEEN0632 ethanolamine ammonia-lyase, heavy chain
YP_001747470.1	TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: pen:PSEEN0633 transport protein
YP_001747471.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN0634 NAD+ dependent aldehyde dehydrogenase
YP_001747472.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN0635 sigma-54 dependent transcriptional regulator
YP_001747473.1	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: pen:PSEEN0636 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase
YP_001747474.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: pen:PSEEN0637 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_001747475.1	PFAM: protein of unknown function DUF1375; KEGG: pen:PSEEN0638 hypothetical protein
YP_001747476.1	KEGG: pen:PSEEN4841 hypothetical protein
YP_001747477.1	PFAM: Peptidase C13, legumain asparaginyl peptidase; MORN repeat-containing protein; KEGG: pen:PSEEN4840 hypothetical protein
YP_001747478.1	PFAM: MaoC domain protein dehydratase; KEGG: pen:PSEEN4838 MaoC-like dehydratase
YP_001747479.1	PFAM: LrgA family protein; KEGG: pen:PSEEN4836 hypothetical protein
YP_001747480.1	PFAM: LrgB family protein; KEGG: pen:PSEEN4835 hypothetical protein
YP_001747481.1	PFAM: peptidase S16 lon domain protein; KEGG: pen:PSEEN4834 ATP-dependent protease La domain protein
YP_001747482.1	PFAM: phosphoesterase PA-phosphatase related; SNARE associated Golgi protein; KEGG: pen:PSEEN4833 phosphatase, PAP2 family
YP_001747483.1	responsible for recognizing base lesions in the genome and initiating base excision DNA repair
YP_001747484.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_001747485.1	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria
YP_001747486.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: pen:PSEEN4828 hypothetical protein
YP_001747487.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_001747488.1	KEGG: pen:PSEEN4826 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_001747489.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: pen:PSEEN4825 rod shape-determining protein
YP_001747490.1	TIGRFAM: lytic murein transglycosylase B; KEGG: pen:PSEEN4824 membrane-bound lytic murein transglycosylase B
YP_001747491.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: pen:PSEEN4823 lipoprotein, rare lipoprotein A family
YP_001747492.1	PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: pen:PSEEN4822 D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5 (precursor)
YP_001747493.1	PFAM: protein of unknown function DUF493; KEGG: pen:PSEEN4821 hypothetical protein
YP_001747494.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_001747495.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_001747496.1	PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: pen:PSEEN4818 muramoyltetrapeptide carboxypeptidase
YP_001747497.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: pen:PSEEN4817 membrane-bound lytic murein transglycosylase
YP_001747498.1	PFAM: protein of unknown function DUF331; KEGG: pen:PSEEN4816 hypothetical protein
YP_001747499.1	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA
YP_001747500.1	PFAM: Rare lipoprotein B; KEGG: pen:PSEEN4814 lipoprotein, rare lipoprotein B family
YP_001747501.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_001747502.1	KEGG: pen:PSEEN4812 hypothetical protein
YP_001747503.1	PFAM: protein of unknown function DUF218; KEGG: pen:PSEEN4811 hypothetical protein
YP_001747504.1	Transfers the fatty acyl group on membrane lipoproteins
YP_001747505.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: pen:PSEEN4809 magnesium and cobalt efflux protein CorC
YP_001747506.1	PFAM: protein of unknown function UPF0054; KEGG: pen:PSEEN4808 hypothetical protein
YP_001747507.1	PFAM: PhoH family protein; KEGG: pen:PSEEN4807 phosphate starvation-inducible protein (PhoH-like)
YP_001747508.1	PFAM: Domain of unknown function DUF1820; KEGG: pfl:PFL_5431 hypothetical protein
YP_001747509.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN4805 hypothetical protein
YP_001747510.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_001747511.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
YP_001747512.1	catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine
YP_001747513.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: pen:PSEEN4801 sensor histidine kinase
YP_001747514.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN4800 acyl-CoA dehydrogenase (AidB)
YP_001747515.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
YP_001747516.1	PFAM: pseudouridine synthase; KEGG: pen:PSEEN4798 pseudouridylate synthase
YP_001747517.1	KEGG: pen:PSEEN4797 hypothetical protein
YP_001747518.1	PFAM: regulatory protein AsnC/Lrp family; regulatory protein MarR; KEGG: pen:PSEEN4796 transcriptional regulator, AsnC family
YP_001747519.1	KEGG: pen:PSEEN4795 hypothetical protein
YP_001747520.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pen:PSEEN4794 cation efflux protein
YP_001747521.1	KEGG: pen:PSEEN4793 hypothetical protein
YP_001747522.1	KEGG: pen:PSEEN4792 helicase, ATP-dependent; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases
YP_001747524.1	PFAM: protein of unknown function UPF0259; KEGG: pen:PSEEN4791 hypothetical protein
YP_001747525.1	KEGG: pen:PSEEN4790 hypothetical protein
YP_001747526.1	PFAM: protein of unknown function DUF88; KEGG: pen:PSEEN4789 hypothetical protein
YP_001747527.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4787 transporter
YP_001747528.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN0718 ATP-dependent RNA helicase, DEAD box family (RhlE)
YP_001747529.1	PFAM: HI0933 family protein; KEGG: pen:PSEEN0719 hypothetical protein
YP_001747530.1	PFAM: histone deacetylase superfamily; KEGG: pen:PSEEN0720 hydrolase; histone deacetylase family protein
YP_001747531.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0723 acetyltransferase, GNAT family
YP_001747532.1	KEGG: pen:PSEEN0725 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase
YP_001747533.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN0726 hydrolase, haloacid dehalogenase-like family
YP_001747534.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN0727 oxidoreductase, zinc-binding alcohol dehydrogenase
YP_001747535.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN0729 transcriptional regulator, GntR family
YP_001747536.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0730 transport protein, MFS superfamily
YP_001747537.1	KEGG: pen:PSEEN0731 D-glucarate dehydratase; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein
YP_001747538.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3962 transcriptional regulator, LysR family
YP_001747539.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_B1307 D-isomer specific 2-hydroxyacid dehydrogenase
YP_001747540.1	TIGRFAM: d-galactonate transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4121 major facilitator superfamily MFS_1
YP_001747541.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN0737 amino acid permease
YP_001747542.1	KEGG: pen:PSEEN0738 hypothetical protein
YP_001747543.1	KEGG: pen:PSEEN0739 hypothetical protein
YP_001747544.1	PFAM: peptidase M50; KEGG: pen:PSEEN0740 membrane zinc metallopeptidase, M50 family
YP_001747545.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: pen:PSEEN0741 hypothetical protein
YP_001747546.1	KEGG: pen:PSEEN0742 hypothetical protein
YP_001747547.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0743 acetyltransferase, GNAT family
YP_001747548.1	PFAM: Tail Collar domain protein; KEGG: pen:PSEEN0745 phage tail collar
YP_001747549.1	SMART: Pyrrolo-quinoline quinone; Parallel beta-helix repeat; KEGG: pen:PSEEN0746 hypothetical protein
YP_001747550.1	PFAM: outer membrane efflux protein; KEGG: pen:PSEEN0747 efflux outer membrane protein
YP_001747551.1	PFAM: adenylylsulfate kinase; KEGG: pen:PSEEN0748 adenosine 5'-phosphosulfate kinase
YP_001747552.1	KEGG: pfl:PFL_3844 ATP/GTP-binding protein, putative
YP_001747553.1	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: pfl:PFL_3843 MazG nucleotide pyrophosphohydrolase domain protein
YP_001747554.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: nmn:NMCC_1094 modification methylase (cytosine-specific DNA methylase)
YP_001747555.1	KEGG: ter:Tery_4677 hypothetical protein
YP_001747556.1	PFAM: protein of unknown function DUF262; KEGG: pna:Pnap_4975 protein of unknown function DUF262
YP_001747557.1	TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: pmb:A9601_04271 hypothetical protein
YP_001747558.1	KEGG: sfu:Sfum_3853 hypothetical protein
YP_001747559.1	KEGG: bur:Bcep18194_B0516 hypothetical protein
YP_001747560.1	KEGG: pfo:Pfl_0746 phage integrase
YP_001747561.1	KEGG: pen:PSEEN5266 hypothetical protein
YP_001747562.1	KEGG: pen:PSEEN4574 hypothetical protein
YP_001747563.1	KEGG: pen:PSEEN0762 hypothetical protein
YP_001747564.1	KEGG: pen:PSEEN5347 hypothetical protein
YP_001747565.1	KEGG: pen:PSEEN0406 hypothetical protein
YP_001747566.1	KEGG: pen:PSEEN5347 hypothetical protein
YP_001747567.1	KEGG: pen:PSEEN0406 hypothetical protein
YP_001747568.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: pen:PSEEN0766 D-lactate deshydrogenase
YP_001747569.1	flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration
YP_001747570.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: pen:PSEEN0768 L-lactate permease
YP_001747571.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN0769 transcriptional regulator, GntR family
YP_001747572.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_001747574.1	PFAM: cyclase/dehydrase; KEGG: pen:PSEEN0771 hypothetical protein
YP_001747575.1	PFAM: SmpA/OmlA domain protein; KEGG: pen:PSEEN0773 outer membrane lipoprotein OmlA
YP_001747576.1	PFAM: ferric-uptake regulator; KEGG: pen:PSEEN0775 transcriptional repressor for ferric uptake
YP_001747577.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: pen:PSEEN0776 DNA repair protein RecN
YP_001747578.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_001747579.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_001747580.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_001747581.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_001747582.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_001747583.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_001747584.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_001747585.1	KEGG: pen:PSEEN0784 hypothetical protein
YP_001747586.1	PFAM: protein of unknown function UPF0044; KEGG: pen:PSEEN0785 hypothetical protein
YP_001747587.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pen:PSEEN0786 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent
YP_001747588.1	KEGG: pen:PSEEN0787 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001747589.1	KEGG: pen:PSEEN0788 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_001747590.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_001747591.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_001747592.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: pen:PSEEN0792 preprotein translocase SecG subunit
YP_001747593.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_001747594.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_001747595.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_001747596.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_001747597.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_001747598.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_001747599.1	KEGG: pen:PSEEN0799 polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (PNPase); PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_001747600.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: psp:PSPPH_4184 osmotically inducible protein, puative
YP_001747601.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pen:PSEEN4742 hypothetical protein
YP_001747602.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN4741 ring-cleaving dioxygenase
YP_001747603.1	PFAM: protein of unknown function DUF748; KEGG: pen:PSEEN4740 hypothetical protein
YP_001747604.1	KEGG: pen:PSEEN4739 hypothetical protein
YP_001747605.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_001747606.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_001747607.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_001747608.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_001747609.1	KEGG: pen:PSEEN4734 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_001747610.1	KEGG: pen:PSEEN4733 poly(A) polymerase I (PAP); TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region
YP_001747611.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN4730 response regulator CbrB
YP_001747612.1	TIGRFAM: PAS sensor protein; PFAM: Na+/solute symporter; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: pen:PSEEN4729 sensory box histidine kinase CrbA
YP_001747613.1	KEGG: pen:PSEEN4728 hypothetical protein
YP_001747614.1	this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu
YP_001747615.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: pen:PSEEN4726 RNA polymerase-binding protein DksA
YP_001747616.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: pen:PSEEN4725 aminotransferase, class I
YP_001747617.1	Regulatory factor involved in maltose metabolism
YP_001747618.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pen:PSEEN4723 iron-sulfur cluster-binding protein, Rieske family
YP_001747619.1	PFAM: periplasmic binding protein; KEGG: pen:PSEEN4722 ABC transporter, periplasmic binding protein
YP_001747620.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: pen:PSEEN4721 ABC transporter, permease component
YP_001747621.1	with HmuTU is involved in the transport of hemin
YP_001747622.1	PFAM: protein of unknown function DUF399; KEGG: pen:PSEEN4719 hypothetical protein
YP_001747623.1	PFAM: TfoX domain protein; KEGG: pen:PSEEN4718 hypothetical protein
YP_001747624.1	KEGG: pen:PSEEN4716 hypothetical protein
YP_001747625.1	KEGG: pen:PSEEN4715 penicillin-binding protein 1B; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001747626.1	KEGG: pen:PSEEN4714 hypothetical protein
YP_001747627.1	PFAM: protein of unknown function DUF446; KEGG: pen:PSEEN4713 hypothetical protein
YP_001747628.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
YP_001747629.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_001747630.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_001747631.1	KEGG: pen:PSEEN4708 phosphatidylserine synthase PssA; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_001747632.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_001747633.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
YP_001747634.1	TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: pen:PSEEN0691 exonuclease V, gamma subunit
YP_001747635.1	TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: pen:PSEEN0692 exonuclease V, beta subunit
YP_001747636.1	TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: pen:PSEEN0693 exonuclease V, alpha subunit
YP_001747637.1	KEGG: pen:PSEEN0695 hypothetical protein
YP_001747638.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: pen:PSEEN0696 hypothetical protein
YP_001747639.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN0697 outer membrane lipoprotein (OmpA domain)
YP_001747640.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0698 transcriptional regulator, LysR family
YP_001747641.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN0699 methylmalonate-semialdehyde dehydrogenase, oxidoreductase protein
YP_001747642.1	KEGG: pen:PSEEN0700 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding
YP_001747643.1	KEGG: psp:PSPPH_1886 hypothetical protein
YP_001747644.1	TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: psp:PSPPH_1885 hypothetical protein
YP_001747645.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: pen:PSEEN0704 hypothetical protein
YP_001747646.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_0715 transcriptional regulator, LysR family
YP_001747647.1	PFAM: protein of unknown function DUF81; KEGG: pfo:Pfl_0716 protein of unknown function DUF81
YP_001747648.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pen:PSEEN0713 hypothetical protein
YP_001747649.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pen:PSEEN0714 probable nitroreductase or quinone reductase
YP_001747650.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0715 transcriptional regulator, LysR family
YP_001747651.1	KEGG: pen:PSEEN0716 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001747652.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN0717 methyl-accepting chemotaxis transducer
YP_001747653.1	PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: pen:PSEEN4786 zinc-dependent peptidase (neutral)
YP_001747654.1	TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: pen:PSEEN4784 protocatechuate 3,4-dioxygenase beta chain (3,4-PCD)
YP_001747655.1	KEGG: pen:PSEEN4783 protocatechuate 3,4-dioxygenase alpha chain (3,4-PCD); TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase
YP_001747656.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN4782 hypothetical protein
YP_001747657.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4781 transcriptional regulator, LysR family
YP_001747658.1	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs
YP_001747659.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN4779 transporter
YP_001747660.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4778 transporter, MFS family
YP_001747661.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: pen:PSEEN4777 ubiquinol oxidase subunit I, cyanide insensitive
YP_001747662.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: pen:PSEEN4776 ubiquinol oxidase subunit II, cyanide insensitive
YP_001747663.1	KEGG: pen:PSEEN4775 hypothetical protein
YP_001747664.1	PFAM: methyltransferase small; KEGG: pen:PSEEN4774 nucleotide methyltransferase
YP_001747665.1	PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: pen:PSEEN4773 transcriptional regulator, LuxR family
YP_001747666.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN4772 ferredoxin--NADP+ reductase
YP_001747667.1	forms homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_001747668.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_001747669.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN0801 xanthine/uracil permease
YP_001747670.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN0802 hypothetical protein
YP_001747671.1	PFAM: chitin-binding domain 3 protein; KEGG: fal:FRAAL0124 putative chitin-binding protein (partial match)
YP_001747672.1	PFAM: carbon starvation protein CstA; KEGG: pen:PSEEN0803 carbon starvation protein CstA
YP_001747673.1	PFAM: protein of unknown function DUF466; KEGG: pen:PSEEN0804 hypothetical protein
YP_001747674.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pen:PSEEN0805 cobalamin synthesis protein/P47K family protein
YP_001747675.1	PFAM: methylenetetrahydrofolate reductase; KEGG: pen:PSEEN4641 methylenetetrahydrofolate reductase
YP_001747676.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_001747677.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001747678.1	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity
YP_001747679.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN4626 hydrolase, alpha/beta fold family
YP_001747680.1	PFAM: HopJ type III effector protein; KEGG: pfl:PFL_0946 type III effector HopPmaJ
YP_001747681.1	PFAM: protein of unknown function DUF1244; KEGG: pen:PSEEN4624 hypothetical protein
YP_001747682.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN4623 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001747683.1	KEGG: pen:PSEEN4622 hypothetical protein
YP_001747684.1	PFAM: regulatory protein MerR; KEGG: psa:PST_1977 transcriptional regulator, MerR family
YP_001747685.1	KEGG: pen:PSEEN4621 hypothetical protein
YP_001747686.1	KEGG: pfl:PFL_0954 sensory box protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001747687.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_001747688.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN4616 hydrolase, alpha/beta fold family
YP_001747689.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN4615 oxidoreductase, short chain dehydrogenase/reductase family
YP_001747690.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pen:PSEEN4613 transcriptional regulator, IclR family
YP_001747691.1	An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine
YP_001747692.1	KEGG: pen:PSEEN4611 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969
YP_001747693.1	TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN4610 maleylacetoacetate isomerase
YP_001747694.1	KEGG: pen:PSEEN4608 hypothetical protein
YP_001747695.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: pen:PSEEN4606 leucine dehydrogenase
YP_001747696.1	PFAM: YebG family protein; KEGG: pen:PSEEN4605 hypothetical protein
YP_001747697.1	KEGG: pen:PSEEN4603 hypothetical protein
YP_001747698.1	PFAM: phosphate-starvation-inducible E; KEGG: pen:PSEEN4603 hypothetical protein
YP_001747699.1	KEGG: sbn:Sbal195_0804 hypothetical protein
YP_001747700.1	KEGG: pat:Patl_0675 hypothetical protein
YP_001747706.1	PFAM: Relaxase/mobilization nuclease family protein; KEGG: bcz:pE33L54_0050 relaxase
YP_001747707.1	PFAM: mobilisation protein
YP_001747709.1	PFAM: Resolvase domain; KEGG: mlo:mlr4668 site-specific recombinase
YP_001747710.1	KEGG: pen:PSEEN4603 hypothetical protein
YP_001747711.1	KEGG: pen:PSEEN4602 hypothetical protein
YP_001747712.1	KEGG: pen:PSEEN0657 hypothetical protein
YP_001747713.1	KEGG: pen:PSEEN0656 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001747714.1	PFAM: TadE family protein; KEGG: pen:PSEEN0655 hypothetical protein
YP_001747715.1	PFAM: peptidase A24A prepilin type IV; KEGG: pen:PSEEN0654 prepilin peptidase; typeII/IV secretion
YP_001747716.1	KEGG: pen:PSEEN0652 hypothetical protein
YP_001747717.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN0651 hypothetical protein
YP_001747718.1	PFAM: type II secretion system protein; KEGG: pen:PSEEN0650 type II/IV secretion system membrane protein
YP_001747719.1	PFAM: type II secretion system protein; KEGG: pen:PSEEN0649 type II/IV secretion system membrane protein
YP_001747720.1	PFAM: type II secretion system protein E; KEGG: pen:PSEEN0648 type II/IV secretion system protein E
YP_001747721.1	KEGG: pen:PSEEN0647 hypothetical protein
YP_001747722.1	PFAM: type II and III secretion system protein; KEGG: pen:PSEEN0646 type II/IV secretion system protein D
YP_001747723.1	TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: pen:PSEEN0645 Flp pilus assembly protein CpaB
YP_001747724.1	PFAM: Flp/Fap pilin component; KEGG: pen:PSEEN0642 hypothetical protein
YP_001747725.1	PFAM: response regulator receiver; KEGG: pen:PSEEN0641 response regulator
YP_001747726.1	KEGG: pen:PSEEN4601 hypothetical protein
YP_001747727.1	KEGG: pen:PSEEN4570 hypothetical protein
YP_001747728.1	PFAM: PepSY-associated TM helix domain protein; KEGG: pen:PSEEN4569 hypothetical protein
YP_001747729.1	KEGG: pen:PSEEN4568 hypothetical protein
YP_001747730.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN4567 RNA polymerase sigma-70 factor, ECF subfamily
YP_001747731.1	PFAM: FecR protein; KEGG: pen:PSEEN4566 FecR-like transmembrane sensor
YP_001747732.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN4565 TonB-dependent siderophore receptor
YP_001747733.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN4564 transcriptional regulator, AraC family
YP_001747734.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4563 hypothetical protein
YP_001747735.1	KEGG: pfo:Pfl_4560 hypothetical protein
YP_001747736.1	PFAM: GtrA family protein; KEGG: sfv:SFV_0258 bactoprenol-linked glucose translocase
YP_001747737.1	PFAM: glycosyl transferase family 2; KEGG: sec:SC4084 putative phage glycosyltransferase
YP_001747738.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pen:PSEEN4562 D-isomer specific 2-hydroxyacid dehydrogenase
YP_001747739.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4561 transcriptional regulator, LysR family
YP_001747740.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN4560 fusaric acid resistance protein
YP_001747741.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: pen:PSEEN4559 fusaric acid resistance protein
YP_001747742.1	PFAM: protein of unknown function DUF1656; KEGG: pen:PSEEN4558 hypothetical protein
YP_001747743.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4557 HlyD family secretion protein
YP_001747744.1	PFAM: UspA domain protein; KEGG: pen:PSEEN4556 universal stress protein family
YP_001747745.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4555 transcriptional regulator, LysR family
YP_001747746.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4554 multidrug efflux MFS transporter
YP_001747747.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4553 multidrug efflux MFS membrane fusion protein
YP_001747748.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN4552 multidrug efflux MFS outer membrane protein
YP_001747749.1	KEGG: ilo:IL0083 short chain dehydrogenase/reductase family protein
YP_001747750.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN4551 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001747751.1	KEGG: pen:PSEEN4547 hypothetical protein
YP_001747752.1	KEGG: pen:PSEEN4546 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AlgA; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_001747753.1	KEGG: pen:PSEEN4545 alginate O-acetyltransferase AlgF
YP_001747754.1	KEGG: pen:PSEEN4544 alginate O-acetylation protein AlgJ precursor
YP_001747755.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: pen:PSEEN4543 alginate O-acetylation protein AlgI
YP_001747756.1	Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export
YP_001747757.1	KEGG: pen:PSEEN4541 alginate biosynthesis protein AlgX
YP_001747758.1	SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: pen:PSEEN4540 alginate-C5-mannuronan-epimerase AlgG
YP_001747759.1	KEGG: pen:PSEEN4539 outer membrane protein AlgE
YP_001747760.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN4538 alginate biosynthesis precursor AlgK
YP_001747761.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN4537 alginate biosynthesis protein Alg44
YP_001747762.1	KEGG: pen:PSEEN4536 glycosyl transferase Alg8
YP_001747763.1	KEGG: pen:PSEEN4535 GDP-mannose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_001747764.1	KEGG: plu:plu2640 hypothetical protein
YP_001747765.1	KEGG: pst:PSPTO_0243 hypothetical protein
YP_001747766.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2947 ABC transporter, ATP-binding protein
YP_001747767.1	PFAM: protein of unknown function DUF214; KEGG: plu:plu2647 unnamed protein product; highly similar to permease of ABC transporter
YP_001747768.1	PFAM: outer membrane efflux protein; KEGG: plu:plu2646 hypothetical protein
YP_001747769.1	PFAM: secretion protein HlyD family protein; KEGG: plu:plu2645 hypothetical protein
YP_001747770.1	PFAM: protein of unknown function DUF328; KEGG: pen:PSEEN4534 hypothetical protein
YP_001747771.1	PFAM: polysaccharide deacetylase; KEGG: pen:PSEEN4533 polysaccharide deacetylase family protein
YP_001747772.1	PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: pen:PSEEN4531 PhoH family protein
YP_001747773.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_001747774.1	TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: thiamineS protein; KEGG: pen:PSEEN4529 molybdenum cofactor biosynthesis protein D
YP_001747775.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: pen:PSEEN4528 molybdenum cofactor biosynthesis protein E
YP_001747776.1	enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation
YP_001747777.1	PFAM: phospholipase/Carboxylesterase; KEGG: pen:PSEEN4526 carboxylesterase
YP_001747778.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN4525 general amino acid ABC transporter, periplasmic binding protein
YP_001747779.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN4524 general amino acid ABC transporter, permease protein
YP_001747780.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN4523 general amino acid ABC transporter, permease protein
YP_001747781.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN4522 general amino acid ABC transporter, ATP-binding protein
YP_001747782.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: pen:PSEEN4521 HtrA-like serine protease AlgW
YP_001747783.1	PFAM: protein of unknown function DUF34; KEGG: pen:PSEEN4520 hypothetical protein
YP_001747784.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_001747785.1	in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis
YP_001747786.1	KEGG: pfo:Pfl_5397 S-type pyocin
YP_001747788.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN4516 transcriptional regulator, AsnC family
YP_001747789.1	catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine
YP_001747790.1	PFAM: protein of unknown function DUF1043; KEGG: pen:PSEEN4513 hypothetical protein
YP_001747791.1	KEGG: pen:PSEEN4512 hypothetical protein
YP_001747792.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001747793.1	PFAM: AFG1-family ATPase; KEGG: pen:PSEEN4510 ATPase
YP_001747794.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN4509 transcriptional regulator, AraC family
YP_001747795.1	PFAM: aldo/keto reductase; KEGG: pen:PSEEN4508 oxidoreductase, aldo/keto reductase family
YP_001747796.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_001747797.1	forms a direct contact with the tRNA during translation
YP_001747798.1	KEGG: pen:PSEEN4505 ubiquinol--cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein
YP_001747799.1	PFAM: Cytochrome b/b6 domain; KEGG: pen:PSEEN4504 ubiquinol--cytochrome c reductase, cytochrome b
YP_001747800.1	KEGG: pen:PSEEN4503 ubiquinol--cytochrome c reductase, cytochrome c1
YP_001747801.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN4502 stringent starvation protein A
YP_001747802.1	PFAM: Stringent starvation protein B; KEGG: pen:PSEEN4501 stringent starvation protein B
YP_001747803.1	PFAM: protein of unknown function DUF903; KEGG: pen:PSEEN4500 hypothetical protein
YP_001747804.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: pen:PSEEN4499 lipoprotein
YP_001747805.1	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate
YP_001747806.1	PFAM: protein of unknown function UPF0102; KEGG: pen:PSEEN4497 hypothetical protein
YP_001747807.1	PFAM: LppC family lipoprotein; KEGG: pen:PSEEN4496 lipoprotein LppC
YP_001747808.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pen:PSEEN4495 hypothetical protein
YP_001747809.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_001747810.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: pen:PSEEN4493 S-adenosylmethionine methyltransferase MraW
YP_001747811.1	PFAM: cell division protein FtsL; KEGG: pen:PSEEN4492 cell division protein FtsL
YP_001747812.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pen:PSEEN4491 penicillin-binding protein
YP_001747813.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_001747814.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: pen:PSEEN4489 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme)
YP_001747815.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_001747816.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_001747817.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: pen:PSEEN4486 cell division protein, stabililzes FtsZ ring
YP_001747818.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_001747819.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_001747820.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_001747821.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: pen:PSEEN4482 cell division protein FtsQ
YP_001747822.1	PFAM: cell division protein FtsA; KEGG: pen:PSEEN4481 cell division protein FtsA
YP_001747823.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_001747824.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_001747825.1	KEGG: pen:PSEEN4478 hypothetical protein
YP_001747826.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins
YP_001747827.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_001747828.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN4475 glutathione S-transferase
YP_001747829.1	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; thiamine monophosphate synthase; KEGG: pen:PSEEN4474 hydrolase MutT/NUDIX family/thiamine monophosphate synthase
YP_001747830.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: pen:PSEEN4473 Cob(I)yrinic acid a,c-diamide adenosyltransferase
YP_001747831.1	KEGG: pen:PSEEN4472 sensory box histidine kinase/response regulator (hybrid); TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001747832.1	catalyzes the formation of 2-dehydropantoate from (R)-pantoate
YP_001747833.1	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
YP_001747834.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pen:PSEEN4468 ion small-conductance mechanosensitive channel
YP_001747835.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4467 multidrug efflux MFS transporter
YP_001747836.1	TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4466 muropeptide permease AmpG
YP_001747837.1	PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pen:PSEEN4465 methylated DNA-protein cysteine methyltransferase
YP_001747838.1	KEGG: pen:PSEEN4464 hypothetical protein
YP_001747839.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pen:PSEEN4463 hypothetical protein
YP_001747840.1	F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein
YP_001747841.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_001747842.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_001747843.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN4458 response regulator ColR
YP_001747844.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN4457 sensor histidine kinase ColS
YP_001747845.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN4456 hypothetical protein
YP_001747846.1	PFAM: lipopolysaccharide kinase; KEGG: pen:PSEEN4455 lipopolysaccharide kinase InaA
YP_001747847.1	KEGG: pen:PSEEN4454 hypothetical protein
YP_001747848.1	MexW; inner membrane protein; member of RND (resistance, nodulation, and division) family; involved in resistance to fluoroquinolones, tetracycline, chloramphenicol, erythromycin, ethidium bromide, and acriflavine; functions along with MexV and OprM
YP_001747849.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN1110 multidrug RND transporter, membrane fusion protein (HylD family)
YP_001747850.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN1115 hypothetical protein
YP_001747851.1	KEGG: pen:PSEEN1116 lipoprotein
YP_001747852.1	PFAM: protein of unknown function DUF1111; KEGG: pen:PSEEN1117 hypothetical protein
YP_001747853.1	KEGG: pen:PSEEN1119 hypothetical protein
YP_001747854.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pen:PSEEN1120 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domain)
YP_001747855.1	PFAM: manganese and iron superoxide dismutase; KEGG: pen:PSEEN1121 superoxide dismutase
YP_001747856.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN1123 transporter, LysE family
YP_001747857.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_001747858.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: pen:PSEEN1125 nucleoside-diphosphate-sugar epimerases
YP_001747859.1	KEGG: pen:PSEEN1126 hypothetical protein
YP_001747860.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pen:PSEEN1127 xenobiotic reductase B
YP_001747861.1	PFAM: regulatory protein ArsR; KEGG: pen:PSEEN1128 transcriptional regulator (ArsR family)
YP_001747862.1	PFAM: protein of unknown function DUF479; KEGG: pen:PSEEN1129 hypothetical protein
YP_001747863.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pen:PSEEN1136 acyltransferase
YP_001747864.1	KEGG: pen:PSEEN1137 hypothetical protein
YP_001747865.1	KEGG: pen:PSEEN1138 hypothetical protein
YP_001747866.1	PFAM: beta-lactamase; KEGG: pen:PSEEN1139 beta-lactamase
YP_001747867.1	KEGG: pen:PSEEN1140 hypothetical protein
YP_001747868.1	PFAM: YceI family protein; KEGG: pen:PSEEN1141 hypothetical protein
YP_001747869.1	KEGG: pen:PSEEN1142 phospholipase
YP_001747870.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pen:PSEEN1143 protease C56
YP_001747871.1	KEGG: pmy:Pmen_3272 protein of unknown function DUF1486
YP_001747872.1	KEGG: pen:PSEEN1144 hypothetical protein
YP_001747873.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pmy:Pmen_3270 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001747874.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: pen:PSEEN1145 fumarate hydratase, class I
YP_001747875.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN1146 ferredoxin reductase
YP_001747876.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001747877.1	KEGG: pen:PSEEN1148 hypothetical protein
YP_001747878.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN1149 hypothetical protein
YP_001747879.1	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates
YP_001747880.1	KEGG: pen:PSEEN1151 transcriptional regulator MvaT, P16 subunit
YP_001747881.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_001747882.1	PFAM: conserved hypothetical protein; KEGG: pfo:Pfl_4434 hypothetical protein
YP_001747883.1	KEGG: pau:PA14_56040 putative deacetylase
YP_001747884.1	PFAM: glycosyl transferase group 1; KEGG: pfo:Pfl_4432 glycosyl transferase, group 1
YP_001747885.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1154 methyl-accepting chemotaxis transducer
YP_001747886.1	PFAM: protein of unknown function DUF853 NPT hydrolase putative; SMART: AAA ATPase; KEGG: pen:PSEEN1155 hypothetical protein
YP_001747887.1	PFAM: phosphate transporter; KEGG: pen:PSEEN1157 low-affinity inorganic phosphate transporter
YP_001747888.1	KEGG: pen:PSEEN1158 hypothetical protein
YP_001747889.1	TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pen:PSEEN1160 regulatory protein for pca operon (activator)
YP_001747890.1	TIGRFAM: benzoate transport; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN1162 4-hydroxybenzoate transporter (MFS superfamily)
YP_001747891.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
YP_001747892.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN1166 dicarboxylic acid transport protein; alpha-ketoglutarate permease (MFS superfamily)
YP_001747893.1	Catalyzes the cycloisomerization of cis,cis-muconate
YP_001747894.1	TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN1168 3-oxoadipate enol-lactonase II (beta-ketoadipate enol-lactone hydrolase II)
YP_001747895.1	KEGG: pen:PSEEN1169 gamma-carboxymuconolactone decarboxylase (CMD); TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase
YP_001747896.1	PFAM: protein of unknown function DUF962; KEGG: pen:PSEEN4366 hypothetical protein
YP_001747897.1	PFAM: outer membrane porin; KEGG: pen:PSEEN4363 porin, OprD family
YP_001747898.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN4362 multidrug/solvent efflux outer membrane protein TtgC, RND family
YP_001747899.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN4361 multidrug/solvent RND transporter TtgB
YP_001747900.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4360 multidrug/solvent efflux RND membrane fusion protein
YP_001747901.1	PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: pen:PSEEN4359 transcriptional regulator TtgR for multidrug efflux pump (TetR/AcrR family)
YP_001747902.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4357 drug resistance transporter, EmrB/QacA family
YP_001747903.1	KEGG: pen:PSEEN4356 carboxyphosphonoenolpyruvate phosphonomutase
YP_001747904.1	KEGG: pen:PSEEN4355 hypothetical protein
YP_001747905.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4354 transcriptional regulator, LysR family
YP_001747906.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN4353 metallo-beta-lactamase superfamily protein
YP_001747907.1	PFAM: NAD-dependent epimerase/dehydratase; TrkA-N domain protein; NmrA family protein; KEGG: pen:PSEEN4352 hypothetical protein
YP_001747908.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4351 transcriptional regulator, LysR family
YP_001747909.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pen:PSEEN4350 acetolactate synthase, large subunit
YP_001747910.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pen:PSEEN4349 transcriptional regulator, AraC family
YP_001747911.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pen:PSEEN4348 hypothetical protein
YP_001747912.1	KEGG: pen:PSEEN4347 hypothetical protein
YP_001747913.1	KEGG: pen:PSEEN4346 hypothetical protein
YP_001747914.1	KEGG: pen:PSEEN4345 hypothetical protein
YP_001747915.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN4342 dicarboxylate transport protein (MFS superfamily)
YP_001747916.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: pen:PSEEN4341 sigma-54 dependent response regulator
YP_001747917.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN4340 sensor histidine kinase
YP_001747918.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: pen:PSEEN4339 beta-D-glucoside glucohydrolase, periplasmic
YP_001747919.1	PFAM: protein of unknown function DUF477; KEGG: pen:PSEEN4338 hypothetical protein
YP_001747920.1	KEGG: pen:PSEEN4336 hypothetical protein
YP_001747921.1	KEGG: pen:PSEEN4330 hypothetical protein
YP_001747922.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pen:PSEEN4329 glycerophosphodiester phosphodiesterase
YP_001747923.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN4319 (R)-3-hydroxydecanoyl-ACP:CoA transacylase (3-hydroxyacyl-CoA-acyl carrier protein transferase)
YP_001747924.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pen:PSEEN4317 16S rRNA pseudouridylate 516 synthase
YP_001747925.1	KEGG: pen:PSEEN4316 hypothetical protein
YP_001747926.1	KEGG: pen:PSEEN4314 lipoprotein
YP_001747927.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pen:PSEEN4313 enoyl-CoA hydratase/isomerase
YP_001747928.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_001747929.1	TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: pen:PSEEN4308 ammonia monooxygenase
YP_001747930.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: pen:PSEEN4307 tricarboxylate transport protein TctA
YP_001747931.1	KEGG: pen:PSEEN4306 tricarboxylate transport protein TctB
YP_001747932.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN4305 tricarboxylate transport protein TctC
YP_001747933.1	PFAM: outer membrane porin; KEGG: pen:PSEEN4304 porin, OprD family
YP_001747934.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN4303 DNA-binding response regulator TctD
YP_001747935.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: pen:PSEEN4302 sensor histidine kinase TctE
YP_001747936.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN4301 hypothetical protein
YP_001747937.1	KEGG: pen:PSEEN4300 hypothetical protein
YP_001747938.1	PFAM: protein of unknown function DUF339; KEGG: pen:PSEEN4299 hypothetical protein
YP_001747939.1	KEGG: pen:PSEEN4298 hypothetical protein
YP_001747940.1	catalyzes the formation of oxaloacetate from L-aspartate
YP_001747941.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor regulates genes involved in alginate biosynthesis
YP_001747942.1	PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: pen:PSEEN4295 sigma factor AlgU negative regulatory protein MucA
YP_001747943.1	PFAM: MucB/RseB family protein; KEGG: pen:PSEEN4294 sigma factor AlgU regulatory protein MucB
YP_001747944.1	KEGG: pen:PSEEN4293 serine protease MucD; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_001747945.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_001747946.1	KEGG: pen:PSEEN4291 leader peptidase (signal peptidase I) , serine protease; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_001747947.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_001747948.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_001747949.1	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA
YP_001747950.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_001747951.1	TIGRFAM: methyltransferase; PFAM: methyltransferase putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN4373 methyltransferase
YP_001747952.1	TIGRFAM: methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN4372 methyltransferase
YP_001747953.1	KEGG: psp:PSPPH_3942 lipoprotein, putative
YP_001747954.1	KEGG: pen:PSEEN4367 DNA-binding ATP-dependent protease La-2; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001747955.1	TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: pen:PSEEN1170 glucose dehydrogenase Gcd
YP_001747956.1	PFAM: Carbohydrate-selective porin OprB; KEGG: pen:PSEEN1171 porin B precursor (outer membrane protein D1) (glucose porin)
YP_001747957.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN1173 TonB-dependent receptor
YP_001747958.1	KEGG: pen:PSEEN1174 hypothetical protein
YP_001747959.1	KEGG: pen:PSEEN1175 hypothetical protein
YP_001747960.1	PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: pen:PSEEN1176 iron-chelator utilization protein
YP_001747961.1	PFAM: transcriptional regulator PadR family protein; KEGG: pen:PSEEN1177 transcriptional regulator, PadR family
YP_001747962.1	KEGG: pen:PSEEN1178 membrane carboxypeptidase (penicillin-binding protein)
YP_001747963.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN1179 amino acid permease
YP_001747964.1	PFAM: ferredoxin-dependent glutamate synthase; KEGG: pen:PSEEN1180 ferredoxin-dependent glutamate synthase
YP_001747965.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN1182 ATP-dependent DNA helicase Lhr
YP_001747966.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN1183 hydrolase, MutT/NUDIX family protein
YP_001747967.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1184 transcriptional regulator MetR
YP_001747968.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN1185 hydrolase, alpha/beta fold family
YP_001747969.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN1188 sigma-54 dependent response regulator
YP_001747970.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1189 sensor histidine kinase
YP_001747971.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1190 glutamate-aspartate ABC transporter, ATP-binding protein
YP_001747972.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1191 glutamate-aspartate ABC transporter, permease protein
YP_001747973.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1192 glutamate/aspartate ABC transporter, permease protein
YP_001747974.1	PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN1193 glutamate/aspartate ABC transporter, periplasmic binding protein
YP_001747975.1	SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN1194 hypothetical protein
YP_001747976.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
YP_001747977.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: pen:PSEEN1196 glycerol-3-phosphate regulon repressor
YP_001747978.1	Converts glycerol and ADP to glycerol-3-phosphate and ADP
YP_001747979.1	TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: pen:PSEEN1198 glycerol uptake facilitator protein
YP_001747980.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pen:PSEEN1199 hypothetical protein
YP_001747981.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN1200 ABC transporter, ATP-binding protein
YP_001747982.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_001747983.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pen:PSEEN1202 oxidoreductase molybdopterin-binding
YP_001747984.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: pen:PSEEN1203 hypothetical protein
YP_001747985.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: pen:PSEEN1204 bacterioferritin
YP_001747986.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pen:PSEEN1205 bacterioferritin-associated ferredoxin Bfd
YP_001747987.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN1206 peroxiredoxin (alkyl hydroperoxide reductase C)
YP_001747988.1	Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A)
YP_001747989.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_001747990.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1209 outer membrane protein, OmpA/MotB family
YP_001747991.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_001747992.1	KEGG: pen:PSEEN1211 hypothetical protein
YP_001747993.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN1212 response regulator, LuxR family
YP_001747994.1	KEGG: pen:PSEEN1213 hypothetical protein
YP_001747995.1	KEGG: pen:PSEEN1214 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_001747996.1	KEGG: pen:PSEEN1215 hypothetical protein
YP_001747997.1	TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: pen:PSEEN1216 electron transport complex protein RnfG
YP_001747998.1	TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: pen:PSEEN1217 electron transport complex protein RnfD
YP_001747999.1	KEGG: pen:PSEEN1219 electron transport complex protein RnfA
YP_001748000.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_001748001.1	PFAM: protein of unknown function DUF59; KEGG: pen:PSEEN1221 ATPase, Mrp family
YP_001748002.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pen:PSEEN1222 cold shock protein CapB
YP_001748003.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_001748004.1	KEGG: pen:PSEEN1224 hypothetical protein
YP_001748005.1	PFAM: metallophosphoesterase; KEGG: psb:Psyr_3881 hypothetical protein
YP_001748006.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: psa:PST_2663 ATP-dependent helicase, DEAD box family
YP_001748007.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: pen:PSEEN1225 hypothetical protein
YP_001748008.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA
YP_001748009.1	KEGG: pmy:Pmen_2196 exonuclease of the beta-lactamase fold involved in RNA processing-like protein
YP_001748011.1	PFAM: peptidase S45 penicillin amidase; KEGG: pen:PSEEN1226 penicillin amidase
YP_001748012.1	PFAM: SEC-C motif domain protein; KEGG: pen:PSEEN1227 hypothetical protein
YP_001748013.1	SMART: Water Stress and Hypersensitive response domain protein; KEGG: pen:PSEEN1228 hypothetical protein
YP_001748014.1	PFAM: SEC-C motif domain protein; KEGG: pen:PSEEN1229 hypothetical protein
YP_001748015.1	KEGG: pen:PSEEN1230 hypothetical protein
YP_001748016.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1231 outer membrane protein, OmpA family
YP_001748017.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1232 outer memebrane protein, OmpA family
YP_001748018.1	PFAM: protein of unknown function DUF1145; KEGG: pen:PSEEN1233 hypothetical protein
YP_001748019.1	KEGG: pen:PSEEN1272 hypothetical protein
YP_001748020.1	helicase involved in DNA repair and perhaps also replication
YP_001748021.1	KEGG: pen:PSEEN1274 hydrolase
YP_001748022.1	PFAM: beta-lactamase; KEGG: pen:PSEEN1275 beta-lactamase
YP_001748023.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1276 outer membrane protein, OmpA family
YP_001748024.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate
YP_001748025.1	PFAM: 17 kDa surface antigen; KEGG: pen:PSEEN1279 lipoprotein
YP_001748026.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN1280 FAD-dependent dehydrogenases
YP_001748027.1	KEGG: pen:PSEEN1281 lipoprotein
YP_001748028.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1282 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001748029.1	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
YP_001748030.1	Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
YP_001748031.1	PFAM: inner-membrane translocator; KEGG: pen:PSEEN1285 branched-chain amino acid ABC transporter, permease protein
YP_001748032.1	PFAM: Extracellular ligand-binding receptor; KEGG: pen:PSEEN1286 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001748033.1	KEGG: pen:PSEEN1288 hypothetical protein
YP_001748034.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pen:PSEEN1291 3-hydroxyisobutyrate dehydrogenase
YP_001748035.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: pen:PSEEN1292 signal transduction protein; GGDEF/EAL domain
YP_001748036.1	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA
YP_001748037.1	KEGG: pen:PSEEN1294 hypothetical protein
YP_001748038.1	KEGG: pen:PSEEN1295 hypothetical protein
YP_001748039.1	KEGG: pen:PSEEN1296 hypothetical protein
YP_001748040.1	KEGG: pen:PSEEN1297 hypothetical protein
YP_001748041.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: pen:PSEEN1298 hypothetical protein
YP_001748042.1	PFAM: protein of unknown function DUF1656; KEGG: pen:PSEEN1299 hypothetical protein
YP_001748043.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN1300 efflux transporter, membrane fusion protein
YP_001748044.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1305 sensor histidine kinase
YP_001748045.1	KEGG: pen:PSEEN1306 hypothetical protein
YP_001748046.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: pen:PSEEN1308 hypothetical protein
YP_001748047.1	KEGG: pen:PSEEN1310 transporter, formate/nitrite family
YP_001748048.1	catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis
YP_001748049.1	PFAM: amine oxidase; KEGG: bvi:Bcep1808_4425 amine oxidase
YP_001748050.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: msm:MSMEG_2988 carbon-nitrogen hydrolase family protein
YP_001748051.1	KEGG: aau:AAur_3986 putative integral membrane protein
YP_001748052.1	PFAM: Asparaginase/glutaminase; KEGG: bov:BOV_1888 asparaginase family protein
YP_001748053.1	TIGRFAM: yecA family protein; KEGG: pen:PSEEN1320 hypothetical protein
YP_001748054.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN1321 glutathione S-transferase
YP_001748055.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pen:PSEEN1322 oxidoreductase, FAD-binding
YP_001748056.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1324 transcriptional regulator, LysR family
YP_001748057.1	PFAM: Aldose 1-epimerase; KEGG: pst:PSPTO_1047 hypothetical protein
YP_001748058.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: psp:PSPPH_0932 hypothetical protein
YP_001748059.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: psp:PSPPH_0933 TRAP dicarboxylate transporter, DctM subunit
YP_001748060.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pfo:Pfl_3455 tripartite ATP-independent periplasmic transporter, DctQ component
YP_001748061.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pfo:Pfl_3454 TRAP dicarboxylate transporter-DctP subunit
YP_001748062.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pst:PSPTO_1052 senescence marker protein-30 family protein
YP_001748063.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: pmy:Pmen_3299 NAD-dependent epimerase/dehydratase
YP_001748064.1	PFAM: outer membrane porin; KEGG: psb:Psyr_2127 outer membrane porin
YP_001748065.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001748066.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001748067.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN1339 DNA-binding response regulator
YP_001748068.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1340 sensory histidine kinase
YP_001748069.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: pen:PSEEN1341 phosphopantetheinyl transferase component of siderophore synthetase
YP_001748070.1	PFAM: dienelactone hydrolase; BAAT/Acyl-CoA thioester hydrolase; KEGG: pen:PSEEN1342 hydrolase; probable dienelactone hydrolase
YP_001748071.1	KEGG: pen:PSEEN1343 outer membrane protein H1
YP_001748072.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN1345 transcriptional regulatory protein PhoP
YP_001748073.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1346 sensor protein PhoQ
YP_001748074.1	involved in the transport of C4-dicarboxylates across the membrane
YP_001748075.1	PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: pen:PSEEN1348 metallopeptidase, SprT family
YP_001748076.1	PFAM: protein of unknown function DUF1282; KEGG: pen:PSEEN1349 hypothetical protein
YP_001748077.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
YP_001748078.1	KEGG: pen:PSEEN1351 DNA-glycosylase
YP_001748079.1	KEGG: pen:PSEEN1352 hypothetical protein
YP_001748080.1	TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: pen:PSEEN1353 tryptophan repressor binding protein WrbA
YP_001748081.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: pen:PSEEN1354 arsenate reductase
YP_001748082.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN1355 thioredoxin
YP_001748083.1	PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pen:PSEEN1356 hypothetical protein
YP_001748084.1	KEGG: pen:PSEEN1357 hypothetical protein
YP_001748085.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pen:PSEEN1358 D-lactate dehydrogenase, NAD-dependent
YP_001748086.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: pen:PSEEN1359 GacS sensor kinase protein
YP_001748087.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN1360 DNA-binding response regulator
YP_001748088.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1361 sensor histidine kinase
YP_001748089.1	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide
YP_001748090.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
YP_001748091.1	KEGG: pen:PSEEN1364 GTP pyrophosphokinase RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein
YP_001748092.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era
YP_001748093.1	KEGG: pen:PSEEN1366 hypothetical protein
YP_001748094.1	KEGG: pen:PSEEN1367 hypothetical protein
YP_001748095.1	KEGG: pen:PSEEN1368 hypothetical protein
YP_001748096.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_001748097.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_001748098.1	KEGG: pen:PSEEN1371 hypothetical protein
YP_001748099.1	PFAM: protein of unknown function UPF0118; KEGG: pen:PSEEN1372 permease
YP_001748100.1	controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP
YP_001748101.1	PFAM: NLP/P60 protein; KEGG: pen:PSEEN1374 hypothetical protein
YP_001748102.1	PFAM: NLP/P60 protein; KEGG: pen:PSEEN1375 hypothetical protein
YP_001748103.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psp:PSPPH_1579 transcriptional regulator, LysR family
YP_001748104.1	KEGG: psp:PSPPH_1578 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_001748105.1	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide
YP_001748106.1	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid
YP_001748107.1	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: psp:PSPPH_3700 cobalamin biosynthesis protein, putative
YP_001748108.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
YP_001748109.1	cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase
YP_001748110.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_001748111.1	catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP
YP_001748112.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
YP_001748113.1	TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; KEGG: pen:PSEEN1386 alpha-ribazole-5'-phosphate phosphatase CobC
YP_001748114.1	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole
YP_001748115.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN1389 transcriptional regulator, MarR family
YP_001748116.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN1390 transporter
YP_001748117.1	KEGG: pen:PSEEN1391 hypothetical protein
YP_001748118.1	PFAM: glutathione peroxidase; KEGG: pen:PSEEN1392 glutathione peroxidase
YP_001748119.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: pen:PSEEN1396 long-chain fatty acid transporter
YP_001748120.1	KEGG: pen:PSEEN1397 hypothetical protein
YP_001748121.1	KEGG: pen:PSEEN1400 hypothetical protein
YP_001748122.1	KEGG: pen:PSEEN1403 hypothetical protein
YP_001748123.1	PFAM: protein of unknown function DUF195; KEGG: pen:PSEEN1404 hypothetical protein
YP_001748124.1	PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1405 sensory box histidine kinase/response regulator hybrid
YP_001748125.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: mmw:Mmwyl1_0972 transcriptional regulator, GntR family
YP_001748126.1	PFAM: amidohydrolase 2; KEGG: mmw:Mmwyl1_0971 amidohydrolase 2
YP_001748127.1	PFAM: Citrate transporter; Dicarboxylate carrier MatC domain protein; KEGG: mmw:Mmwyl1_0970 dicarboxylate carrier MatC domain protein
YP_001748128.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pfo:Pfl_0728 chemotaxis sensory transducer
YP_001748129.1	PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pen:PSEEN1408 acyltransferase
YP_001748130.1	PFAM: small multidrug resistance protein; KEGG: pen:PSEEN1409 multidrug efflux pump
YP_001748131.1	Required for efficient pilin antigenic variation
YP_001748132.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pen:PSEEN1415 methionine aminopeptidase, type I Map
YP_001748133.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: pen:PSEEN1417 assimilatory nitrate reductase
YP_001748134.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pen:PSEEN1418 nitrite reductase, large subunit, nucleotide-and Fe/S-cluster binding
YP_001748135.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: pen:PSEEN1419 nitrite reductase, small subunit NirD
YP_001748136.1	TIGRFAM: pca operon transcription factor PcaQ; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1425 pca operon transcriptional activator PcaQ
YP_001748138.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN1426 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)
YP_001748139.1	PFAM: protein of unknown function DUF1232; KEGG: pen:PSEEN1427 hypothetical protein
YP_001748140.1	PFAM: helix-turn-helix domain protein; KEGG: pen:PSEEN1428 transcriptional regulator, Cro/CI family
YP_001748141.1	KEGG: pen:PSEEN1429 hypothetical protein
YP_001748142.1	KEGG: pen:PSEEN1431 carboxy-terminal protease for penicillin-binding protein 3 Prc; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001748143.1	TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN1432 alcohol dehydrogenase, zinc-containing
YP_001748144.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN1433 hydrolase, haloacid dehalogenase-like family
YP_001748145.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN1434 ABC transporter, ATP-binding protein
YP_001748146.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1435 ABC transporter, permease protein
YP_001748147.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1436 ABC transporter, permease protein
YP_001748148.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: pen:PSEEN1437 hypothetical protein
YP_001748149.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN1438 ABC transporter, periplasmic binding protein
YP_001748150.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pen:PSEEN1439 transcriptional regulator, GntR family
YP_001748151.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pen:PSEEN1440 transporter, mechanosensitive ion channel family protein
YP_001748152.1	KEGG: pen:PSEEN1441 hypothetical protein
YP_001748153.1	KEGG: psb:Psyr_3766 hypothetical protein
YP_001748154.1	catalyzes the removal of amino acids from the N termini of peptides
YP_001748155.1	PFAM: pseudouridine synthase; KEGG: pen:PSEEN1443 ribosomal large subunit pseudouridine synthase A
YP_001748156.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_001748157.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN1445 septum site-determining protein MinD
YP_001748158.1	blocks the formation of polar Z-ring septums
YP_001748159.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
YP_001748160.1	PFAM: Patatin; KEGG: pen:PSEEN1448 hypothetical protein
YP_001748161.1	PFAM: VacJ family lipoprotein; KEGG: pen:PSEEN1449 lipoprotein VacJ-like
YP_001748162.1	KEGG: pen:PSEEN1450 hypothetical protein
YP_001748163.1	KEGG: pen:PSEEN1451 hypothetical protein
YP_001748164.1	PFAM: glycoside hydrolase family 17; KEGG: pen:PSEEN1452 beta (1-6) glucans synthase
YP_001748165.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN1453 glycine betaine-binding protein, ABC type
YP_001748166.1	PFAM: protein of unknown function DUF485; KEGG: pen:PSEEN1454 hypothetical protein
YP_001748167.1	member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake
YP_001748168.1	KEGG: pen:PSEEN1462 hypothetical protein
YP_001748169.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN1463 oxidoreductase, short chain dehydrogenase/reductase family
YP_001748170.1	PFAM: carbon storage regulator; KEGG: pen:PSEEN1464 carbon storage regulator
YP_001748171.1	PFAM: protein of unknown function UPF0270; KEGG: pen:PSEEN1465 hypothetical protein
YP_001748172.1	TIGRFAM: hydrolase, peptidase M42 family; PFAM: peptidase M20; peptidase M42 family protein; KEGG: pen:PSEEN1467 peptidase M42
YP_001748173.1	KEGG: pen:PSEEN1468 acetyltransferase, GNAT family; TIGRFAM: GNAT-family acetyltransferase TIGR03103; PFAM: GCN5-related N-acetyltransferase; RimK domain protein ATP-grasp
YP_001748174.1	KEGG: pen:PSEEN1469 asparagine synthetase AsnB; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase family amidotransferase; PFAM: glutamine amidotransferase class-II; asparagine synthase
YP_001748175.1	PFAM: integrase family protein; KEGG: par:Psyc_0479 possible phage integrase
YP_001748176.1	KEGG: mag:amb1496 hypothetical protein
YP_001748179.1	KEGG: pst:PSPTO_3944 hypothetical protein
YP_001748180.1	PFAM: carbon storage regulator; KEGG: hha:Hhal_1651 carbon storage regulator, CsrA
YP_001748181.1	PFAM: regulatory protein LuxR; KEGG: pen:PSEEN2243 LuxR family DNA binding protein
YP_001748182.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: psb:Psyr_2812 helix-turn-helix motif:peptidase S24, S26A and S26B
YP_001748184.1	KEGG: nme:NMB1093 hypothetical protein
YP_001748189.1	PFAM: BRO domain protein; KEGG: mca:MCA2642 hypothetical protein
YP_001748192.1	KEGG: bbr:BB1683 phage-related hypothetical protein
YP_001748193.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: hha:Hhal_0638 IstB domain protein ATP-binding protein
YP_001748194.1	PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; KEGG: noc:Noc_0223 DnaB helicase
YP_001748197.1	KEGG: hch:HCH_00599 hypothetical protein
YP_001748198.1	KEGG: pap:PSPA7_5310 hypothetical protein
YP_001748201.1	KEGG: pen:PSEEN3076 hypothetical protein
YP_001748202.1	KEGG: psp:PSPPH_0656 hypothetical protein
YP_001748203.1	KEGG: psb:Psyr_4598 lipoprotein, putative
YP_001748207.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ecv:APECO1_3888 putative phage endonuclease
YP_001748208.1	KEGG: pol:Bpro_2971 hypothetical protein
YP_001748209.1	PFAM: Terminase; KEGG: dvu:DVU1503 terminase, large subunit
YP_001748211.1	TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: bpm:BURPS1710b_1680 phage portal protein, HK97 family
YP_001748212.1	TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: bpm:BURPS1710b_1681 gp4
YP_001748213.1	TIGRFAM: phage major capsid protein, HK97 family; KEGG: nar:Saro_0649 phage major capsid protein, HK97
YP_001748215.1	KEGG: dac:Daci_1636 hypothetical protein
YP_001748216.1	TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein; KEGG: pap:PSPA7_5157 phage head-tail adaptor, putative
YP_001748217.1	TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: shw:Sputw3181_2475 phage protein, HK97 GP10 family
YP_001748218.1	KEGG: son:SO_2957 hypothetical protein
YP_001748219.1	KEGG: pae:PA0633 hypothetical protein
YP_001748220.1	KEGG: pen:PSEEN4181 hypothetical protein
YP_001748221.1	KEGG: pen:PSEEN4180 phage protein
YP_001748222.1	KEGG: deb:DehaBAV1_0039 hypothetical protein
YP_001748223.1	TIGRFAM: phage tail tape measure protein, lambda family; PFAM: tail tape measure protein lambda; KEGG: rsh:Rsph17029_3328 hypothetical protein
YP_001748224.1	KEGG: pst:PSPTO_4044 hypothetical protein
YP_001748225.1	KEGG: pst:PSPTO_4043 hypothetical protein
YP_001748226.1	KEGG: pst:PSPTO_2088 hypothetical protein
YP_001748227.1	PFAM: Fibronectin type III domain protein; Protein of unknown function DUF1983; KEGG: pst:PSPTO_4041 host specificity protein J, internal deletion
YP_001748230.1	KEGG: pmy:Pmen_3951 hypothetical protein
YP_001748231.1	KEGG: psp:PSPPH_2397 hypothetical protein
YP_001748232.1	KEGG: rha:RHA1_ro10077 hypothetical protein
YP_001748233.1	catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules
YP_001748234.1	PFAM: protein of unknown function DUF344; KEGG: pen:PSEEN1471 hypothetical protein
YP_001748235.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN1473 hypothetical protein
YP_001748236.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_001748237.1	KEGG: pen:PSEEN1475 hypothetical protein
YP_001748238.1	PFAM: BolA family protein; KEGG: pen:PSEEN1476 transcriptional regulator, BolA superfamily
YP_001748239.1	PFAM: Rhodanese domain protein; KEGG: pen:PSEEN1477 hypothetical protein
YP_001748240.1	PFAM: DSBA oxidoreductase; KEGG: pen:PSEEN1478 hypothetical protein
YP_001748241.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1479 ABC transporter, ATP-binding protein
YP_001748242.1	KEGG: pen:PSEEN1480 sensory box protein/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001748243.1	KEGG: pen:PSEEN1481 hypothetical protein
YP_001748244.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN1482 oxidoreductase, short chain dehydrogenase/reductase family
YP_001748245.1	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate
YP_001748246.1	Involved in ubiquinone biosynthesis
YP_001748247.1	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway
YP_001748248.1	negatively supercoils closed circular double-stranded DNA
YP_001748249.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_001748250.1	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: pen:PSEEN1489 bifunctional chorismate mutase/prephenate dehydratase PheA
YP_001748251.1	catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate and catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_001748252.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_001748253.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_001748254.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_001748255.1	KEGG: pst:PSPTO_1752 hypothetical protein
YP_001748256.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: pst:PSPTO_1753 hypothetical protein
YP_001748257.1	KEGG: pol:Bpro_4942 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_001748258.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: tcx:Tcr_1677 phosphomannomutase
YP_001748259.1	PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4015 glycosyl transferase, group 1
YP_001748260.1	PFAM: ABC-2 type transporter; KEGG: pap:PSPA7_6241 membrane subunit of A-band LPS efflux transporter
YP_001748261.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A2903 ABC-type transporter, ATPase component
YP_001748262.1	PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: fal:FRAAL4063 hypothetical protein
YP_001748263.1	PFAM: glycosyl transferase group 1; KEGG: rci:RCIX213 predicted glycosyltransferase (group 1)
YP_001748264.1	PFAM: glycosyl transferase group 1; KEGG: rci:RCIX212 putative glycosyltransferase (group 1)
YP_001748265.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: pfo:Pfl_5030 NAD-dependent epimerase/dehydratase
YP_001748266.1	PFAM: acyltransferase 3; KEGG: bra:BRADO5246 conserved hypothetical protein; putative membrane protein; putative acyltransferase
YP_001748267.1	KEGG: pmu:PM0525 KpsF protein, putative; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_001748268.1	KEGG: mfa:Mfla_2010 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_001748269.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: psb:Psyr_0924 glucose-1-phosphate thymidylyltransferase, long form
YP_001748270.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pst:PSPTO_1080 dTDP-4-dehydrorhamnose reductase
YP_001748271.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pst:PSPTO_1081 dTDP-glucose 4,6-dehydratase
YP_001748272.1	KEGG: syw:SYNW0417 hypothetical protein
YP_001748273.1	PFAM: Capsule polysaccharide biosynthesis protein; KEGG: cko:CKO_00746 hypothetical protein
YP_001748274.1	KEGG: hau:Haur_2166 glycosyl transferase group 1
YP_001748275.1	PFAM: glycosyl transferase family 2; KEGG: psp:PSPPH_0975 glycosyl transferase, group 2 family protein
YP_001748276.1	PFAM: glycosyl transferase family 2; KEGG: psb:Psyr_0930 glycosyl transferase, family 2
YP_001748277.1	KEGG: psb:Psyr_0931 hemolysin-type calcium-binding region
YP_001748278.1	KEGG: psb:Psyr_0932 hypothetical protein
YP_001748279.1	KEGG: psp:PSPPH_0980 alkaline protease secretion ATP-binding protein AprD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001748280.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: psb:Psyr_0934 type I secretion membrane fusion protein, HlyD
YP_001748281.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: psb:Psyr_0935 type I secretion outer membrane protein, TolC
YP_001748282.1	TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: psb:Psyr_0916 GDP-mannose 4,6-dehydratase
YP_001748283.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: psp:PSPPH_0952 NAD dependent epimerase/dehydratase family protein
YP_001748284.1	PFAM: glycosyl transferase group 1; KEGG: sgl:SG1120 mannosyltransferase B
YP_001748285.1	PFAM: glycosyl transferase group 1; KEGG: sgl:SG1121 glycosyltransferase
YP_001748286.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pol:Bpro_3986 NAD-dependent epimerase/dehydratase
YP_001748287.1	PFAM: glycosyl transferase family 4; KEGG: pen:PSEEN1505 glycosyl transferase WbpL
YP_001748288.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; KEGG: pen:PSEEN1506 dTDP-glucose-4,6-dehydratase/UDP-glucose 4-epimerase WbpM
YP_001748289.1	TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; KEGG: pen:PSEEN1508 hypothetical protein
YP_001748290.1	KEGG: pen:PSEEN1509 hypothetical protein
YP_001748291.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_001748292.1	PFAM: O-antigen polymerase; KEGG: pae:PA4999 O-antigen ligase, WaaL
YP_001748293.1	PFAM: glycosyl transferase family 2; KEGG: pap:PSPA7_5735 glycosyl transferase, group 2 family protein
YP_001748295.1	KEGG: pen:PSEEN1423 hypothetical protein
YP_001748296.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_001748297.1	KEGG: pen:PSEEN1513 hypothetical protein
YP_001748298.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: pen:PSEEN1511 zinc-containing alcohol dehydrogenase
YP_001748299.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN1512 oxidoreductase, short chain dehydrogenase/reductase family
YP_001748300.1	KEGG: pen:PSEEN3527 lipoprotein
YP_001748301.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1517 methyl-accepting chemotaxis transducer
YP_001748302.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN1518 benzoate membrane transport protein (MFS superfamily)
YP_001748303.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN1519 glutathione S-transferase
YP_001748304.1	PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: pen:PSEEN1520 hypothetical protein
YP_001748305.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_001748306.1	PFAM: Smr protein/MutS2; KEGG: pen:PSEEN1522 hypothetical protein
YP_001748307.1	KEGG: pen:PSEEN1523 hypothetical protein
YP_001748308.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN1524 isochorismatase
YP_001748309.1	involved in methylation of ribosomal protein L3
YP_001748310.1	KEGG: pen:PSEEN1526 hypothetical protein
YP_001748311.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN1527 hydrolase, alpha/beta fold family
YP_001748312.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_001748313.1	PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN1530 transporter, MFS family
YP_001748314.1	KEGG: pen:PSEEN1531 oxidase
YP_001748315.1	KEGG: pen:PSEEN1532 hypothetical protein
YP_001748316.1	PFAM: Ankyrin; KEGG: pen:PSEEN1535 hypothetical protein
YP_001748317.1	KEGG: pen:PSEEN1536 hypothetical protein
YP_001748319.1	PFAM: zinc/iron permease; KEGG: pen:PSEEN1537 divalent heavy-metal cations transporter (ZIP family)
YP_001748320.1	KEGG: pen:PSEEN1538 hypothetical protein
YP_001748321.1	PFAM: sulfatase; KEGG: pen:PSEEN1540 membrane sulfatase
YP_001748322.1	KEGG: pen:PSEEN1541 hypothetical protein
YP_001748323.1	PFAM: protein of unknown function DUF1260; KEGG: pen:PSEEN1542 hypothetical protein
YP_001748324.1	KEGG: pen:PSEEN1543 cytochrome c
YP_001748325.1	PFAM: glutamine amidotransferase class-I; KEGG: pen:PSEEN1544 glutamine amidotransferase, class I
YP_001748326.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: pen:PSEEN1545 magnesium/cobalt transporter, MIT family
YP_001748327.1	KEGG: pen:PSEEN1546 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase
YP_001748328.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001748329.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; Phosphogluconate dehydrogenase, NAD-binding, putative-like; KEGG: spe:Spro_2089 phosphogluconate dehydrogenase, NAD-binding, putative-like protein
YP_001748330.1	PFAM: outer membrane porin; KEGG: pfl:PFL_1440 phenylacetic acid-specific porin
YP_001748331.1	PFAM: sodium:dicarboxylate symporter; KEGG: bch:Bcen2424_2873 sodium:dicarboxylate symporter
YP_001748332.1	PFAM: amidohydrolase 2; KEGG: bja:blr3839 putative dicarboxylic acid hydrolase
YP_001748333.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo2546 putative nitrogen assimilation regulatory protein
YP_001748334.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN1548 TonB-dependent ferric siderophore receptor
YP_001748335.1	KEGG: pen:PSEEN1549 hypothetical protein
YP_001748336.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN1555 transport protein (MFS superfamily)
YP_001748337.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001748338.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1558 transcriptional regulator, LysR family
YP_001748339.1	KEGG: pen:PSEEN1559 hypothetical protein
YP_001748340.1	KEGG: pen:PSEEN1560 hypothetical protein
YP_001748341.1	KEGG: pen:PSEEN1561 hypothetical protein
YP_001748342.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_001748343.1	PFAM: OsmC family protein; KEGG: pen:PSEEN1563 organic hydroperoxide resistance protein
YP_001748344.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN1564 transcriptional regulator (MarR family)
YP_001748345.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1565 transcriptional regulator, LysR family
YP_001748346.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN1566 hypothetical protein
YP_001748347.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1567 transcriptional regulator, LysR family
YP_001748348.1	PFAM: protein of unknown function DUF1127; KEGG: pen:PSEEN1568 hypothetical protein
YP_001748349.1	KEGG: pen:PSEEN1570 phospho-2-dehydro-3-deoxyheptonate aldolase, class II; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II
YP_001748350.1	KEGG: pen:PSEEN1571 hypothetical protein
YP_001748351.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN1572 ATP-dependent RNA helicase, DEAD box family
YP_001748352.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: pen:PSEEN1580 aromatic ring-opening dioxygenase
YP_001748353.1	catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide
YP_001748354.1	putative metalloprotease
YP_001748355.1	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor
YP_001748356.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
YP_001748357.1	PFAM: glutathione peroxidase; KEGG: pen:PSEEN1585 glutathione peroxidase
YP_001748358.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1586 sensor histidine kinase/response regulator hybrid
YP_001748359.1	PFAM: protein of unknown function DUF815; KEGG: pen:PSEEN1587 hypothetical protein
YP_001748360.1	KEGG: pen:PSEEN1588 hypothetical protein
YP_001748361.1	KEGG: pen:PSEEN1589 hypothetical protein
YP_001748362.1	KEGG: psb:Psyr_2035 hypothetical protein
YP_001748363.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: psb:Psyr_2034 outer membrane autotransporter barrel
YP_001748364.1	KEGG: psb:Psyr_2033 hypothetical protein
YP_001748365.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: psb:Psyr_2040 YD repeat
YP_001748366.1	KEGG: pst:PSPTO_2232 hypothetical protein
YP_001748367.1	KEGG: psb:Psyr_2041 hypothetical protein
YP_001748368.1	KEGG: pst:PSPTO_2236 hypothetical protein
YP_001748369.1	KEGG: psb:Psyr_2042 hypothetical protein
YP_001748370.1	KEGG: pst:PSPTO_2238 lipoprotein, putative
YP_001748371.1	PFAM: YD repeat-containing protein; KEGG: psb:Psyr_2044 YD repeat
YP_001748372.1	PFAM: Fimbrial protein; KEGG: pst:PSPTO_2227 fimbrial protein, putative
YP_001748373.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pst:PSPTO_2228 outer membrane usher protein FimD
YP_001748374.1	PFAM: pili assembly chaperone; KEGG: psb:Psyr_2038 pili assembly chaperone:bacterial pili assembly chaperone
YP_001748375.1	PFAM: Fimbrial protein; KEGG: pst:PSPTO_2230 type I pilus biogensis protein FimA
YP_001748376.1	KEGG: pen:PSEEN1593 hypothetical protein
YP_001748377.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_001748378.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN1595 glutathione S-transferase
YP_001748379.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1596 ABC transporter, ATP-binding protein
YP_001748380.1	PFAM: ABC-2 type transporter; KEGG: pen:PSEEN1597 ABC transporter, permease protein
YP_001748381.1	KEGG: pen:PSEEN1598 hypothetical protein
YP_001748382.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: psb:Psyr_1632 ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2
YP_001748383.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: pen:PSEEN1601 transporter, MotA/TolQ/ExbB proton channel family protein
YP_001748384.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pen:PSEEN1602 biopolymer transport protein ExbD/TolR family
YP_001748385.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_001748386.1	PFAM: protein of unknown function DUF343; KEGG: pen:PSEEN1604 hypothetical protein
YP_001748387.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_001748388.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pen:PSEEN1606 low molecular weight phosphotyrosine protein phosphatase
YP_001748389.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_001748390.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: pen:PSEEN1608 ribonuclease E Rne
YP_001748391.1	KEGG: pen:PSEEN1609 23S rRNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001748392.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN1610 hydrolase, haloacid dehalogenase-like family
YP_001748393.1	TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: pen:PSEEN1611 peptidase SppA
YP_001748394.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_001748395.1	PFAM: protein of unknown function DUF177; KEGG: pen:PSEEN1614 hypothetical protein
YP_001748396.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_001748397.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_001748398.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: pen:PSEEN1617 malonyl-CoA-[acyl-carrier-protein] transacylase
YP_001748399.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001748400.1	carries the fatty acid chain in fatty acid biosynthesis
YP_001748401.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001748402.1	catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate
YP_001748403.1	PFAM: aminodeoxychorismate lyase; KEGG: pen:PSEEN1623 hypothetical protein
YP_001748404.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_001748405.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA
YP_001748406.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: pen:PSEEN1627 deoxyribonuclease, TatD family
YP_001748407.1	PFAM: aminotransferase class V; KEGG: pen:PSEEN1628 hypothetical protein
YP_001748408.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN1629 transcriptional regulator, TetR family
YP_001748409.1	PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pen:PSEEN1630 molybdenum cofactor biosynthesis protein A
YP_001748410.1	KEGG: pen:PSEEN1631 lipoprotein
YP_001748411.1	PFAM: protein of unknown function DUF1285; KEGG: pen:PSEEN1632 hypothetical protein
YP_001748412.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_001748413.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_001748414.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_001748415.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN1643 transcriptional regulator, TetR family
YP_001748416.1	KEGG: pen:PSEEN1644 hydrolase
YP_001748417.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN1645 hypothetical protein
YP_001748418.1	PFAM: dihydrouridine synthase DuS; KEGG: pen:PSEEN1646 tRNA-dihydrouridine synthase C
YP_001748419.1	PFAM: heat shock protein Hsp20; KEGG: pen:PSEEN1647 small heat-shock protein IbpA
YP_001748420.1	KEGG: pen:PSEEN1648 sensory box/GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001748421.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1649 transcriptional regulator, LysR family
YP_001748422.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_001748423.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_001748424.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pfl:PFL_2065 methlytransferase, UbiE/COQ5 family
YP_001748425.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_001748426.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_001748427.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_001748428.1	PFAM: Peptidoglycan-binding LysM; KEGG: pen:PSEEN1688 hypothetical protein
YP_001748429.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_001748430.1	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis
YP_001748431.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits
YP_001748432.1	TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: pen:PSEEN1692 folylpolyglutamate synthase
YP_001748433.1	PFAM: Sporulation domain protein; KEGG: pen:PSEEN1693 hypothetical protein
YP_001748434.1	PFAM: Colicin V production protein; KEGG: pen:PSEEN1694 bacteriocin production protein CvpA
YP_001748435.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_001748436.1	catalyzes the conversion of O-succinylhomoserine into homocysteine
YP_001748437.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN1697 oxidoreductase, short chain dehydrogenase/reductase family
YP_001748438.1	KEGG: pen:PSEEN1700 hypothetical protein
YP_001748439.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN1701 transcriptional regulator, AraC family
YP_001748440.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN1702 hypothetical protein
YP_001748441.1	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: pap:PSPA7_3433 cation transport protein
YP_001748442.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: pen:PSEEN1703 2,4-dienoyl-CoA reductase
YP_001748443.1	KEGG: pen:PSEEN1704 1-aminocyclopropane-1-carboxylate deaminase
YP_001748444.1	PFAM: cytochrome B561; KEGG: pen:PSEEN1705 cytochrome b(561)
YP_001748445.1	PFAM: Domain of unknown function DUF1853; KEGG: pen:PSEEN1707 hypothetical protein
YP_001748446.1	catalyzes the phosphorylation of NAD to NADP
YP_001748447.1	PFAM: metallophosphoesterase; KEGG: pen:PSEEN1709 serine/threonine protein phosphatase
YP_001748448.1	PFAM: Rhomboid family protein; KEGG: pen:PSEEN1710 hypothetical protein
YP_001748449.1	PFAM: protein of unknown function DUF1315; KEGG: pen:PSEEN1711 hypothetical protein
YP_001748450.1	KEGG: pen:PSEEN1712 hypothetical protein
YP_001748451.1	TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: pen:PSEEN1713 aminopeptidase N
YP_001748452.1	KEGG: pen:PSEEN1714 hypothetical protein
YP_001748453.1	KEGG: pen:PSEEN1715 hypothetical protein
YP_001748454.1	KEGG: pen:PSEEN1716 hypothetical protein
YP_001748455.1	KEGG: pen:PSEEN1717 hypothetical protein
YP_001748456.1	KEGG: pen:PSEEN1719 hypothetical protein
YP_001748457.1	PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: pen:PSEEN1720 glutathione S-transferase
YP_001748458.1	PFAM: SMC domain protein; KEGG: pen:PSEEN1721 exonuclease SbcC
YP_001748459.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: pen:PSEEN1722 exonuclease SbcD
YP_001748460.1	KEGG: pen:PSEEN1724 hypothetical protein
YP_001748461.1	KEGG: pen:PSEEN1725 hypothetical protein
YP_001748462.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN1726 hypothetical protein
YP_001748463.1	PFAM: von Willebrand factor type A; KEGG: pen:PSEEN1727 hypothetical protein
YP_001748464.1	KEGG: pen:PSEEN1728 hypothetical protein
YP_001748465.1	PFAM: protein of unknown function DUF58; KEGG: pen:PSEEN1729 hypothetical protein
YP_001748466.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pen:PSEEN1730 ATPase, MoxR-like protein
YP_001748467.1	KEGG: pap:PSPA7_3887 rhs element Vgr protein
YP_001748468.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN1735 MFS tranporter
YP_001748469.1	catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate
YP_001748470.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1737 transcriptional regulator, GntR family
YP_001748471.1	KEGG: pen:PSEEN1739 hypothetical protein
YP_001748472.1	PFAM: NAD-glutamate dehydrogenase; KEGG: pen:PSEEN1740 NAD-specific glutamate dehydrogenase; arginine inducible
YP_001748473.1	PFAM: protein of unknown function DUF299; KEGG: pen:PSEEN1741 hypothetical protein
YP_001748474.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001748475.1	KEGG: pen:PSEEN1743 hydrolase, alpha/beta fold family
YP_001748476.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_001748477.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: pen:PSEEN1745 metal ion transporter CmaX protein
YP_001748478.1	KEGG: pen:PSEEN1747 hypothetical protein
YP_001748479.1	PFAM: Conserved TM helix repeat-containing protein; KEGG: pen:PSEEN1748 hypothetical protein
YP_001748480.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas fluorescens and P. aeruginosa regulates outer membrane protein OprF expression
YP_001748481.1	PFAM: OmpA/MotB domain protein; OmpF family protein; KEGG: pen:PSEEN1750 outer membrane protein OprF
YP_001748482.1	catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1
YP_001748483.1	SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: pen:PSEEN1751 bifunctional serine/threonine-protein kinase and phosphatase
YP_001748484.1	TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN1752 nitrate transporter
YP_001748485.1	PFAM: response regulator receiver; ANTAR domain protein; KEGG: pen:PSEEN1753 response regulator NasT
YP_001748486.1	KEGG: pen:PSEEN1754 nitrate-binding protein NasS
YP_001748487.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_001748488.1	PFAM: ribosome modulation factor; KEGG: pen:PSEEN1756 ribosome modulation factor
YP_001748489.1	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA
YP_001748490.1	KEGG: pen:PSEEN1758 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001748491.1	TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: pen:PSEEN3770 D-alanyl-D-alanine carboxypeptidase
YP_001748492.1	PFAM: protein of unknown function DUF469; KEGG: pen:PSEEN3769 hypothetical protein
YP_001748493.1	KEGG: pen:PSEEN3768 two-component sensor/response regulator protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: extracellular solute-binding protein family 3
YP_001748494.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN3767 DNA-binding response regulator, LuxR family
YP_001748495.1	dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_001748496.1	KEGG: pen:PSEEN3765 hypothetical protein
YP_001748497.1	KEGG: pen:PSEEN3764 hypothetical protein
YP_001748498.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN3763 hypothetical protein
YP_001748499.1	PFAM: Rh family protein/ammonium transporter; KEGG: pen:PSEEN3762 ammonium transporter
YP_001748500.1	PFAM: glutaredoxin 2; KEGG: pen:PSEEN3761 hypothetical protein
YP_001748501.1	PFAM: Peptidase M15A; KEGG: bte:BTH_II1066 hypothetical protein
YP_001748502.1	KEGG: pen:PSEEN3760 hypothetical protein
YP_001748503.1	PFAM: pseudouridine synthase; KEGG: pen:PSEEN3759 pseudouridylate synthase
YP_001748504.1	KEGG: pen:PSEEN3758 aerotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001748505.1	catalyzes the conversion of citrate to isocitrate
YP_001748506.1	KEGG: pen:PSEEN3755 hypothetical protein
YP_001748507.1	TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs
YP_001748508.1	Required for the de novo synthesis of pyroxidine via the pdxA branch; catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate
YP_001748509.1	KEGG: pen:PSEEN3752 hypothetical protein
YP_001748510.1	KEGG: pen:PSEEN3751 ABC efflux transporter, permease/ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001748511.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN3750 methyl-accepting chemotaxis histidine kinase
YP_001748512.1	PFAM: protein of unknown function DUF903; KEGG: pen:PSEEN3747 hypothetical protein
YP_001748513.1	TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: pen:PSEEN3745 molybdopterin biosynthesis protein B
YP_001748514.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: pen:PSEEN3744 molybdopterin biosynthesis protein, molybdenum incorporation step
YP_001748515.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN3743 glycosyl transferase
YP_001748516.1	cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role
YP_001748517.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN3740 DNA-binding response regulator, LuxR family
YP_001748518.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: pen:PSEEN3739 sensor histidine kinase
YP_001748519.1	KEGG: pen:PSEEN3737 hypothetical protein
YP_001748520.1	PFAM: response regulator receiver; CheW domain protein; KEGG: pen:PSEEN3735 chemotaxis protein CheV
YP_001748521.1	PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: pen:PSEEN3734 hypothetical protein
YP_001748522.1	PFAM: Lytic transglycosylase catalytic; KEGG: pen:PSEEN3733 lytic murein transglycosylase, soluble
YP_001748523.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3732 ABC transporter, ATP-binding protein
YP_001748524.1	PFAM: UspA domain protein; KEGG: pen:PSEEN3731 universal stress protein family
YP_001748525.1	KEGG: pen:PSEEN3730 hypothetical protein
YP_001748526.1	includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_001748527.1	FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_001748528.1	PFAM: protein of unknown function DUF1653; KEGG: pen:PSEEN3726 hypothetical protein
YP_001748529.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_001748530.1	KEGG: pen:PSEEN3724 hypothetical protein
YP_001748531.1	KEGG: pen:PSEEN3723 hypothetical protein
YP_001748532.1	KEGG: pen:PSEEN3722 cell division inhibitor-related protein, SulA-like
YP_001748533.1	Represses a number of genes involved in the response to DNA damage
YP_001748534.1	PFAM: regulatory protein TetR; KEGG: pfl:PFL_1950 transcriptional regulator, TetR family
YP_001748535.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pen:PSEEN3719 hypothetical protein
YP_001748536.1	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
YP_001748537.1	KEGG: pen:PSEEN3717 helicase, SNF2/RAD54 family; PFAM: SNF2-related protein; helicase domain protein; zinc finger SWIM domain protein; SMART: DEAD-like helicases
YP_001748538.1	KEGG: pen:PSEEN3716 hypothetical protein
YP_001748539.1	KEGG: pen:PSEEN3715 transcription-repair coupling protein; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001748540.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent
YP_001748541.1	PFAM: ApbE family lipoprotein; KEGG: pen:PSEEN3713 thiamine biosynthesis lipoprotein ApbE-like
YP_001748542.1	catalyzes the conversion of NADPH to NADH
YP_001748543.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pen:PSEEN3710 glycerophosphoryl diester phosphodiesterase
YP_001748544.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN3709 hypothetical protein
YP_001748545.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN3708 lipoprotein releasing system transmembrane protein LolC
YP_001748546.1	KEGG: pen:PSEEN3707 lipoprotein releasing system, ATP-binding protein LolD; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001748547.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN3706 lipoprotein releasing system transmembrane protein LolE
YP_001748548.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3705 heavy metal sensor histidine kinase
YP_001748549.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3704 DNA-binding heavy metal response regulator
YP_001748550.1	PFAM: blue (type 1) copper domain protein; KEGG: pen:PSEEN3703 copper-binding protein
YP_001748551.1	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
YP_001748552.1	KEGG: pen:PSEEN3701 hypothetical protein
YP_001748553.1	KEGG: pen:PSEEN3700 hypothetical protein
YP_001748554.1	PFAM: VacJ family lipoprotein; KEGG: pen:PSEEN3699 VacJ lipoprotein
YP_001748555.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN3698 hypothetical protein
YP_001748556.1	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: pen:PSEEN3696 response regulator
YP_001748557.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pen:PSEEN3695 anti-anti-sigma factor
YP_001748558.1	KEGG: pen:PSEEN3694 hypothetical protein
YP_001748559.1	KEGG: pen:PSEEN3692 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_001748560.1	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: pen:PSEEN3691 tRNA-dihydrouridine synthase A
YP_001748561.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pst:PSPTO_4277 esterase/lipase/thioesterase family protein
YP_001748562.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_4276 transcriptional regulator, LysR family
YP_001748563.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001748564.1	forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone
YP_001748565.1	KEGG: rme:Rmet_4455 hypothetical protein
YP_001748566.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_0764 periplasmic binding protein/LacI transcriptional regulator
YP_001748567.1	KEGG: bpt:Bpet1181 hypothetical protein
YP_001748568.1	PFAM: luciferase family protein; KEGG: bpt:Bpet1180 putative monooxygenase
YP_001748569.1	KEGG: smd:Smed_2449 cupin 2 conserved barrel domain protein
YP_001748570.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:pRL120168 putative LysR family transcriptional regulator
YP_001748571.1	PFAM: major facilitator superfamily MFS_1; KEGG: mta:Moth_1257 major facilitator superfamily MFS_1
YP_001748572.1	PFAM: alpha/beta hydrolase fold; KEGG: msm:MSMEG_2534 putative carboxylesterase protein
YP_001748573.1	Converts (S)-3-hydroxyactk-CoA to 3-oxoayl-CoA
YP_001748574.1	PFAM: protein of unknown function DUF849; KEGG: vei:Veis_4704 protein of unknown function DUF849
YP_001748575.1	PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_4257 major facilitator superfamily MFS_1
YP_001748576.1	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: bxe:Bxe_A4448 altronate dehydratase
YP_001748577.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: dac:Daci_4254 transcriptional regulator, GntR family
YP_001748578.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_2184 short chain dehydrogenase
YP_001748579.1	catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor
YP_001748580.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: pen:PSEEN1827 formate dehydrogenase, beta subunit
YP_001748581.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pen:PSEEN1828 formate dehydrogenase, alpha subunit
YP_001748582.1	KEGG: pen:PSEEN1829 formate dehydrogenase, delta subunit
YP_001748583.1	PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN1831 ABC efflux transporter, permease/ATP-binding protein
YP_001748584.1	PFAM: protein of unknown function DUF159; KEGG: psb:Psyr_2763 protein of unknown function DUF159
YP_001748585.1	PFAM: copper resistance B precursor; KEGG: pmy:Pmen_2217 copper resistance B precursor
YP_001748586.1	TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pmy:Pmen_2219 copper-resistance protein, CopA family
YP_001748587.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: psb:Psyr_1506 cation efflux protein
YP_001748588.1	TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: pfl:PFL_2185 arsenite efflux transporter
YP_001748589.1	Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space
YP_001748590.1	KEGG: bbr:BB3605 putative iron uptake protein
YP_001748591.1	PFAM: PepSY-associated TM helix domain protein; KEGG: pfo:Pfl_0927 aspartate kinase
YP_001748592.1	KEGG: bbr:BB3603 putative iron uptake protein
YP_001748593.1	PFAM: Haem oxygenase; KEGG: pen:PSEEN1837 heme oxygenase BphO
YP_001748594.1	PFAM: Phosphoglycerate mutase; KEGG: pfl:PFL_2248 phosphoglycerate mutase family protein
YP_001748595.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN1839 hypothetical protein
YP_001748596.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1841 methyl-accepting chemotaxis transducer
YP_001748597.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1842 transcriptional regulator, LysR family
YP_001748598.1	PFAM: transmembrane pair domain protein; KEGG: pen:PSEEN1843 hypothetical protein
YP_001748599.1	KEGG: pen:PSEEN1844 hypothetical protein
YP_001748600.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1847 transcriptional regulator, GntR family
YP_001748601.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1848 transcriptional regulator, GntR family
YP_001748602.1	involved in the transport of C4-dicarboxylates across the membrane
YP_001748603.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN1854 transcriptional regulator, AsnC family
YP_001748604.1	catalyzes the formation of L-proline from L-ornithine
YP_001748605.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: psp:PSPPH_1680 sigma-54 dependent transcriptional regulator
YP_001748606.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: psp:PSPPH_1681 ABC transporter, ATP-binding protein
YP_001748607.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: psp:PSPPH_1682 ABC transporter, ATP-binding protein
YP_001748608.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_3633 binding-protein-dependent transport systems inner membrane component
YP_001748609.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psb:Psyr_1740 binding-protein-dependent transport systems inner membrane component
YP_001748610.1	KEGG: pmy:Pmen_2046 small integral membrane protein-like protein
YP_001748611.1	KEGG: pfo:Pfl_3630 extracellular solute-binding protein, family 1
YP_001748612.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_001748613.1	KEGG: pen:PSEEN1866 hypothetical protein
YP_001748614.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_001748615.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_001748616.1	binds and unfolds substrates as part of the ClpXP protease
YP_001748617.1	KEGG: pen:PSEEN1870 DNA-binding ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001748618.1	PFAM: histone family protein DNA-binding protein; KEGG: pen:PSEEN1871 DNA-binding protein HU-beta
YP_001748619.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pen:PSEEN1872 peptidyl-prolyl cis-trans isomerase D
YP_001748620.1	PFAM: Patatin; KEGG: pen:PSEEN1873 patatin-like phospholipase
YP_001748621.1	KEGG: pen:PSEEN1874 lipoprotein
YP_001748622.1	PFAM: CHAD domain containing protein; KEGG: pen:PSEEN1875 hypothetical protein
YP_001748623.1	KEGG: pen:PSEEN1876 acyl-CoA thioesterase II
YP_001748624.1	KEGG: pen:PSEEN1877 hypothetical protein
YP_001748625.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1878 methyl-accepting chemotaxis transducer
YP_001748626.1	PFAM: TatD-related deoxyribonuclease; KEGG: pen:PSEEN1879 deoxyribonuclease, TatD family
YP_001748627.1	PFAM: Lytic transglycosylase catalytic; SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN1880 lytic transglycosylase
YP_001748628.1	PFAM: DoxX family protein; KEGG: pen:PSEEN1881 hypothetical protein
YP_001748629.1	KEGG: pen:PSEEN1882 hypothetical protein
YP_001748630.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_001748631.1	PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN1884 hypothetical protein
YP_001748632.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1885 ABC transporter, ATP-binding protein
YP_001748633.1	PFAM: lipolytic protein G-D-S-L family; KEGG: pen:PSEEN1886 arylesterase
YP_001748634.1	KEGG: pen:PSEEN1887 hypothetical protein
YP_001748635.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pen:PSEEN1888 hypothetical protein
YP_001748636.1	KEGG: pen:PSEEN1889 outer membrane lipoprotein OprI
YP_001748637.1	KEGG: pen:PSEEN1890 hypothetical protein
YP_001748638.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_001748639.1	catalyzes the formation of 2-dehydropantoate from (R)-pantoate
YP_001748640.1	PFAM: UspA domain protein; KEGG: pen:PSEEN1894 hypothetical protein
YP_001748641.1	LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation
YP_001748642.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_001748643.1	KEGG: pen:PSEEN1897 para-aminodeoxychorismate synthase subunit I PabB; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like
YP_001748644.1	TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: pen:PSEEN1898 hypothetical protein
YP_001748645.1	KEGG: pen:PSEEN1899 hypothetical protein
YP_001748646.1	PFAM: protein of unknown function DUF785; KEGG: pen:PSEEN1900 hypothetical protein
YP_001748647.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1901 transcriptional regulator, GntR family
YP_001748648.1	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate
YP_001748649.1	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity
YP_001748650.1	Catalyzes the conversion of citrate to isocitrate
YP_001748651.1	TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: pen:PSEEN1906 hypothetical protein
YP_001748652.1	functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C
YP_001748653.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_001748654.1	PFAM: protein of unknown function DUF1289; KEGG: pen:PSEEN1909 hypothetical protein
YP_001748656.1	TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: pen:PSEEN1910 6-pyruvoyl tetrahydrobiopterin synthase SscR
YP_001748657.1	KEGG: pen:PSEEN1911 hypothetical protein
YP_001748658.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: pen:PSEEN1912 hypothetical protein
YP_001748659.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: pen:PSEEN1913 hypothetical protein
YP_001748660.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN1914 DNA-binding response regulator
YP_001748661.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: pen:PSEEN1915 sensor histidine kinase
YP_001748662.1	PFAM: CBS domain containing protein; HPP family protein?; KEGG: pen:PSEEN1916 hypothetical protein
YP_001748663.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1917 transcriptional regulator, LysR family
YP_001748664.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pen:PSEEN1919 acetyl-CoA synthetase
YP_001748665.1	PFAM: AFG1-family ATPase; KEGG: pen:PSEEN1920 ATPase, AFG1 family
YP_001748666.1	KEGG: pfo:Pfl_3131 hypothetical protein
YP_001748667.1	KEGG: pen:PSEEN3403 sensory box histidine kinase/response regulator (hybrid); TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_001748668.1	PFAM: response regulator receiver; KEGG: pen:PSEEN3402 response regulator
YP_001748669.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: pen:PSEEN3401 bacteriophytochrome 1
YP_001748670.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3400 type 1 pili protein CsuB
YP_001748671.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3399 type 1 pili subunit CsuA/B protein
YP_001748672.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3398 type 1 pili subunit CsuA/B protein
YP_001748673.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3397 type 1 pili subunit CsuA/B protein
YP_001748674.1	KEGG: pen:PSEEN3396 type 1 pili usher pathway chaperone CsuC
YP_001748675.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pen:PSEEN3395 type 1 pili usher protein CsuD
YP_001748676.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3394 type 1 pili protein CsuE
YP_001748677.1	PFAM: peptidase M14 carboxypeptidase A; KEGG: pen:PSEEN3393 zinc-dependent carboxypeptidase (M14 family)
YP_001748678.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_5357 major facilitator superfamily MFS_1
YP_001748679.1	PFAM: Sigma-70 region 4 type 2; KEGG: pen:PSEEN3392 hypothetical protein
YP_001748680.1	KEGG: pen:PSEEN3391 hypothetical protein
YP_001748681.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: pen:PSEEN3390 transcriptional regulator, Cro/CI family
YP_001748682.1	PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: pen:PSEEN3389 methylcrotonoyl-CoA carboxylase alpha chain
YP_001748683.1	catalyzes the hydration of gamma-carboxygeranoyl-CoA to 3-hydroxy-gamma-carboxygeranoyl-CoA
YP_001748684.1	PFAM: carboxyl transferase; KEGG: pen:PSEEN3387 3-methylcrotonyl-CoA carboxylase, beta subunit
YP_001748685.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN3386 isovaleryl-CoA dehydrogenase
YP_001748686.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pen:PSEEN3384 long-chain-fatty-acid-CoA ligase
YP_001748687.1	KEGG: pen:PSEEN2043 hypothetical protein
YP_001748688.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pen:PSEEN2044 glycosidase, alpha-amylase family protein
YP_001748689.1	KEGG: pen:PSEEN2045 trehalose synthase/glycosidase fusion protein; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001748690.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
YP_001748691.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: pen:PSEEN2047 outer membrane, autotransporter barrel domain protein
YP_001748692.1	KEGG: pen:PSEEN2049 glycosyl hydrolase GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001748693.1	KEGG: pen:PSEEN2050 hypothetical protein
YP_001748694.1	KEGG: pen:PSEEN2051 maltooligosyl trehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001748695.1	KEGG: pen:PSEEN2052 4-alpha-glucanotransferase MalQ; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77
YP_001748696.1	KEGG: pen:PSEEN2053 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001748697.1	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose
YP_001748698.1	PFAM: putative esterase; KEGG: bcy:Bcer98_2405 putative esterase
YP_001748699.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfo:Pfl_5189 TonB-dependent siderophore receptor
YP_001748700.1	PFAM: FecR protein; KEGG: pau:PA14_32720 probable transmembrane sensor
YP_001748701.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pae:PA2468 probable sigma-70 factor, ECF subfamily
YP_001748702.1	KEGG: pen:PSEEN1938 hypothetical protein
YP_001748703.1	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate
YP_001748704.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001748705.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: pen:PSEEN3246 transcriptional regulator, TetR family
YP_001748706.1	catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines
YP_001748707.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_001748708.1	catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position
YP_001748709.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN3254 transporter, NCS1 family
YP_001748710.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_001748711.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN2683 ribonuclease Z
YP_001748712.1	PFAM: Lipocalin family protein; KEGG: pmy:Pmen_0511 lipocalin family protein
YP_001748713.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001748714.1	can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates
YP_001748715.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN2185 hypothetical protein
YP_001748716.1	PFAM: alpha/beta hydrolase fold; KEGG: pap:PSPA7_3995 chloroperoxidase precursor
YP_001748717.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN2186 glutamine synthetase
YP_001748718.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2187 transcriptional regulator
YP_001748719.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2188 oxidoreductase with FAD/NAD(P)-binding domain
YP_001748720.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2190 transcriptional regulator, Lys R family
YP_001748721.1	KEGG: pen:PSEEN2191 porphyromonas-type peptidyl-arginine deiminase; TIGRFAM: agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase
YP_001748722.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN2192 periplasmic polyamine-binding protein
YP_001748723.1	PFAM: alpha/beta hydrolase fold; KEGG: pst:PSPTO_3264 hydrolase, alpha/beta fold family
YP_001748724.1	KEGG: pen:PSEEN3504 hypothetical protein
YP_001748725.1	PFAM: protein of unknown function DUF411; KEGG: pen:PSEEN3503 hypothetical protein
YP_001748726.1	PFAM: peptidase U32; KEGG: pen:PSEEN3499 protease, U32 family
YP_001748727.1	PFAM: protein of unknown function UPF0118; KEGG: pen:PSEEN3498 hypothetical protein
YP_001748728.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN3497 TonB-dependent siderophore receptor
YP_001748729.1	PFAM: regulatory protein LuxR; KEGG: aav:Aave_3810 transcriptional regulator, LuxR family
YP_001748730.1	KEGG: bte:BTH_II1345 hypothetical protein
YP_001748731.1	PFAM: CI repressor; KEGG: tdn:Tmden_0804 hypothetical protein
YP_001748732.1	PFAM: transcriptional activator Ogr/delta; KEGG: csa:Csal_1361 hypothetical protein
YP_001748733.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001748734.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001748735.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_001748736.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001748737.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001748738.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001748739.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001748740.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001748741.1	shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase
YP_001748742.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001748743.1	NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms
YP_001748744.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_001748745.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001748746.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3442 transcriptional regulator, AraC family
YP_001748747.1	KEGG: csa:Csal_2941 hypothetical protein
YP_001748748.1	KEGG: pae:PA1242 hypothetical protein
YP_001748749.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: pen:PSEEN3441 protein-tyrosine phosphatase; autotransporter
YP_001748750.1	PFAM: protein of unknown function DUF1348; KEGG: sit:TM1040_2246 protein of unknown function DUF1348
YP_001748751.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3412 transporter, MFS superfamily
YP_001748752.1	catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid
YP_001748753.1	KEGG: pen:PSEEN3409 hypothetical protein
YP_001748754.1	SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN1194 hypothetical protein
YP_001748755.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN3408 hypothetical protein
YP_001748756.1	PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: pen:PSEEN3407 ferredoxin-nitrite reductase
YP_001748757.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pen:PSEEN3405 periplasmic sugar-binding protein
YP_001748758.1	KEGG: pen:PSEEN3404 hypothetical protein
YP_001748759.1	KEGG: pen:PSEEN2042 hypothetical protein
YP_001748760.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_001748761.1	PFAM: fatty acid cistrans isomerase; KEGG: pen:PSEEN3381 esterified fatty acid cis/trans isomerase
YP_001748762.1	PFAM: acyltransferase 3; KEGG: pen:PSEEN3380 acetyltransferase Act
YP_001748763.1	TIGRFAM: IscR-regulated protein YhgI; PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein; KEGG: pen:PSEEN3379 hypothetical protein
YP_001748764.1	PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN3378 hypothetical protein
YP_001748765.1	PFAM: protein of unknown function DUF461; KEGG: pen:PSEEN3377 hypothetical protein
YP_001748766.1	KEGG: pen:PSEEN3376 hypothetical protein
YP_001748767.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN3375 transcriptional regulator, AraC family
YP_001748768.1	PFAM: branched-chain amino acid transport; KEGG: pen:PSEEN3374 hypothetical protein
YP_001748769.1	PFAM: AzlC family protein; KEGG: pen:PSEEN3373 branched-chain amino acid transport protein, AzlC
YP_001748770.1	KEGG: pen:PSEEN3372 hypothetical protein
YP_001748771.1	KEGG: pen:PSEEN3371 hypothetical protein
YP_001748772.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3370 transporter, LysE family
YP_001748773.1	PFAM: Protein of unknown function YqcI/YcgG; KEGG: pen:PSEEN3369 hypothetical protein
YP_001748774.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3368 transcriptional regulator, LysR family
YP_001748775.1	Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C
YP_001748776.1	SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN3358 hypothetical protein
YP_001748777.1	KEGG: pen:PSEEN3357 hypothetical protein
YP_001748778.1	PFAM: DoxX family protein; KEGG: pen:PSEEN3339 hypothetical protein
YP_001748779.1	PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: pen:PSEEN3338 hypothetical protein
YP_001748780.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2402 sensor histidine kinase
YP_001748781.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2403 two-component response regulator
YP_001748782.1	KEGG: pen:PSEEN2405 hypothetical protein
YP_001748783.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN2406 thioredoxin
YP_001748784.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_001748785.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001748786.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pst:PSPTO_3801 major facilitator family transporter
YP_001748787.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pmy:Pmen_0307 GntR domain protein
YP_001748788.1	PFAM: extracellular solute-binding protein family 3; KEGG: pmy:Pmen_0306 extracellular solute-binding protein, family 3
YP_001748789.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_0305 polar amino acid ABC transporter, inner membrane subunit
YP_001748790.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_5461 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
YP_001748791.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psb:Psyr_0295 ABC transporter
YP_001748792.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN0365 chromosome partitioning protein, ParA family
YP_001748793.1	KEGG: aba:Acid345_0296 hypothetical protein
YP_001748794.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN3185 diguanylate cyclase (GGDEF domain)
YP_001748795.1	KEGG: pen:PSEEN3184 hypothetical protein
YP_001748796.1	PFAM: GCN5-related N-acetyltransferase; KEGG: psp:PSPPH_3010 acetyltransferase, GNAT family
YP_001748797.1	PFAM: outer membrane porin; KEGG: pen:PSEEN2388 porin, OprD family
YP_001748798.1	TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: rru:Rru_A1139 blue (type 1) copper subtype
YP_001748799.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psb:Psyr_3096 ABC transporter
YP_001748800.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: psp:PSPPH_3007 iron ABC transporter, permease protein, putative
YP_001748801.1	PFAM: periplasmic binding protein; KEGG: psb:Psyr_3094 periplasmic binding protein
YP_001748802.1	PFAM: protein of unknown function DUF1624; KEGG: pen:PSEEN2389 hypothetical protein
YP_001748803.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN2012 outer membrane ferric siderophore receptor
YP_001748804.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN3041 polyamine ABC transporter, ATP binding protein
YP_001748805.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3040 polyamine ABC transporter, permease protein
YP_001748806.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3039 polyamine ABC transporter, permease protein
YP_001748807.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN3038 polyamine ABC transporter, periplasmic polyamine-binding protein
YP_001748808.1	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis
YP_001748809.1	PFAM: protein of unknown function DUF1330; KEGG: pen:PSEEN3036 hypothetical protein
YP_001748810.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN2990 oxidoreductase, short chain dehydrogenase/reductase family
YP_001748811.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: pen:PSEEN2989 sensory box histidine kinase/response regulator (hybrid)
YP_001748812.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN2988 transcriptional regulator, GntR family
YP_001748813.1	KEGG: pfl:PFL_2870 hypothetical protein
YP_001748814.1	PFAM: MgtC/SapB transporter; KEGG: pen:PSEEN2986 transporter, MgtC family
YP_001748815.1	catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA
YP_001748816.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN2982 transcriptional regulator, MerR family
YP_001748817.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3049 transcriptional regulator PobR
YP_001748818.1	catalyzes the formation of protocatechuate from 4-hydroxybenzoate
YP_001748819.1	KEGG: pen:PSEEN2162 hypothetical protein
YP_001748820.1	KEGG: pen:PSEEN2163 hypothetical protein
YP_001748821.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2164 FAD-dependant oxidoreductase
YP_001748822.1	PFAM: Sporulation domain protein; KEGG: pen:PSEEN2166 hypothetical protein
YP_001748823.1	KEGG: pen:PSEEN1948 hypothetical protein
YP_001748824.1	KEGG: pde:Pden_1337 hypothetical protein
YP_001748825.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: pfl:PFL_6174 RNA polymerase-binding protein DksA, putative
YP_001748826.1	PFAM: protein of unknown function DUF1654; KEGG: pen:PSEEN1950 hypothetical protein
YP_001748827.1	KEGG: pen:PSEEN1951 glutaminase-asparaginase; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase
YP_001748828.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pen:PSEEN1952 ribose ABC transporter, periplasmic ribose-binding protein RbsB
YP_001748829.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1953 ribose ABC transporter, ATP-binding protein RbsA
YP_001748830.1	PFAM: inner-membrane translocator; KEGG: pen:PSEEN1954 ribose ABC transporter, permease protein RbsC
YP_001748831.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pen:PSEEN1955 ribose operon repressor RbsR
YP_001748832.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1; KEGG: pen:PSEEN1956 ribokinase RbsK
YP_001748833.1	cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source
YP_001748834.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pen:PSEEN1958 inosine-uridine preferring nucleoside hydrolase
YP_001748835.1	KEGG: pen:PSEEN1959 hypothetical protein
YP_001748836.1	KEGG: pen:PSEEN1960 hypothetical protein
YP_001748837.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pen:PSEEN1961 cold shock protein CapA
YP_001748838.1	KEGG: pen:PSEEN1962 hypothetical protein
YP_001748839.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_001748840.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_001748841.1	PFAM: ribosomal protein L35; KEGG: pen:PSEEN1965 50S ribosomal subunit protein A
YP_001748842.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_001748843.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_001748844.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_001748845.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_001748846.1	PFAM: regulatory protein MerR; KEGG: pen:PSEEN1970 transcriptional regulator, MerR family
YP_001748847.1	PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: pfo:Pfl_3015 plasmid conserved hypothetical protein, RAQPRD
YP_001748848.1	activator of 3-phenylpropionic acid catabolism
YP_001748849.1	catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate
YP_001748850.1	catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family
YP_001748851.1	PFAM: alpha/beta hydrolase fold; KEGG: dar:Daro_0911 alpha/beta hydrolase fold
YP_001748852.1	catalyzes the formation of 2-keto-4-hydroxypentanoic acid from 2-hydroxypentadienoic acid
YP_001748853.1	catalyzes the formation of acetyl-CoA from acetalaldehyde
YP_001748854.1	catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate
YP_001748855.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ecj:JW5046 predicted 3-hydroxyphenylpropionic transporter
YP_001748856.1	PFAM: sulfatase; KEGG: pfo:Pfl_0208 sulfatase
YP_001748857.1	PFAM: outer membrane porin; KEGG: pap:PSPA7_4765 probable porin
YP_001748858.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpd:RPD_2526 tetratricopeptide TPR_2
YP_001748859.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pae:PA1367 hypothetical protein
YP_001748860.1	PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_7449 integrase, catalytic region
YP_001748861.1	KEGG: pst:PSPTO_0015 hypothetical protein
YP_001748862.1	KEGG: gme:Gmet_1202 hypothetical protein
YP_001748863.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: psb:Psyr_1707 regulatory protein, GntR:bacterial regulatory protein, GntR
YP_001748864.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_001748865.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_3226 major facilitator superfamily MFS_1
YP_001748866.1	PFAM: protein of unknown function DUF1238; KEGG: pau:PA14_36060 hypothetical protein
YP_001748867.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pmy:Pmen_0227 aldehyde dehydrogenase
YP_001748868.1	PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_A0742 MFS transporter, ACS family
YP_001748869.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pae:PA2263 probable 2-hydroxyacid dehydrogenase
YP_001748870.1	KEGG: pmy:Pmen_1016 SMC domain protein
YP_001748871.1	KEGG: pen:PSEEN5266 hypothetical protein
YP_001748872.1	KEGG: pen:PSEEN4574 hypothetical protein
YP_001748873.1	KEGG: bpt:Bpet0543 conserved hypothetical protein, putative esterase/lipase
YP_001748874.1	PFAM: outer membrane porin; KEGG: pau:PA14_58410 putative outer membrane porin
YP_001748875.1	KEGG: hau:Haur_0331 hypothetical protein
YP_001748876.1	catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate
YP_001748877.1	catalyzes the formation of acetyl-CoA from acetalaldehyde
YP_001748878.1	PFAM: Endoribonuclease L-PSP; KEGG: pol:Bpro_5138 endoribonuclease L-PSP
YP_001748879.1	PFAM: Hydratase/decarboxylase; KEGG: bxe:Bxe_A1150 4-oxalocrotonate decarboxylase
YP_001748880.1	PFAM: Hydratase/decarboxylase; KEGG: rso:RS01662 putative hydratase protein
YP_001748881.1	TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_A1147 2-aminomuconic 6-semialdehyde dehydrogenase
YP_001748882.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bxe:Bxe_A1146 2-aminophenol 1,6-dioxygenase, alpha subunit
YP_001748883.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bxe:Bxe_A1145 2-aminophenol 1,6-dioxygenase, beta subunit
YP_001748884.1	PFAM: Endoribonuclease L-PSP; KEGG: bxe:Bxe_A1144 putative endoribonuclease, translationalinhibitor protein
YP_001748885.1	PFAM: regulatory protein MarR; KEGG: bxe:Bxe_A1143 transcriptional regulator, MarR family
YP_001748886.1	PFAM: regulatory protein TetR; KEGG: bam:Bamb_4737 transcriptional regulator, TetR family
YP_001748887.1	PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_0311 alpha/beta hydrolase
YP_001748888.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eca:ECA1904 probable zinc-binding dehydrogenase
YP_001748889.1	PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: pst:PSPTO_1860 hypothetical protein
YP_001748890.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_001748891.1	KEGG: psb:Psyr_2639 hypothetical protein
YP_001748892.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: kpn:KPN_01138 hypothetical protein
YP_001748893.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pae:PA2489 probable transcriptional regulator
YP_001748894.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: dar:Daro_2666 filamentation induced by cAMP protein Fic
YP_001748895.1	PFAM: protein of unknown function DUF453; KEGG: csa:Csal_0328 protein of unknown function DUF453
YP_001748896.1	TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: spe:Spro_2091 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
YP_001748897.1	PFAM: LmbE family protein; KEGG: kpn:KPN_04049 hypothetical protein
YP_001748898.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_2093 transcriptional regulator, LysR family
YP_001748899.1	extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway
YP_001748900.1	PFAM: Ankyrin; KEGG: pap:PSPA7_5252 hypothetical protein
YP_001748901.1	PFAM: Catalase domain protein; KEGG: pen:PSEEN2810 catalase (hydroperoxidase II)
YP_001748902.1	KEGG: psb:Psyr_2216 hypothetical protein
YP_001748903.1	PFAM: aldo/keto reductase; KEGG: kra:Krad_0968 aldo/keto reductase
YP_001748904.1	PFAM: PfkB domain protein; KEGG: pen:PSEEN1987 fructokinase
YP_001748905.1	TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: pen:PSEEN1988 xylulokinase
YP_001748906.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: pen:PSEEN1989 mannitol dehydrogenase
YP_001748907.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN1990 ATP-binding component of ABC mannitol transporter
YP_001748908.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1991 mannitol ABC transporter, permease protein
YP_001748909.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1992 mannitol ABC transporter, permease protein
YP_001748910.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN1993 mannitol ABC transporter, periplasmic mannitol-binding protein
YP_001748911.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN1994 transcriptional activator MltR
YP_001748912.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pfl:PFL_3473 transcriptional regulator VanR
YP_001748913.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: psp:PSPPH_2474 vanillate monooxygenase, oxidoreductase subunit
YP_001748914.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pfl:PFL_3471 vanillate O-demethylase, oxygenase subunit
YP_001748915.1	PFAM: regulatory protein MarR; KEGG: psp:PSPPH_2432 transcriptional regulator, MarR family
YP_001748916.1	catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA
YP_001748917.1	PFAM: Aldehyde Dehydrogenase_; KEGG: psp:PSPPH_2434 vanillin dehydrogenase
YP_001748918.1	catalyzes the conversion of ferulic acid to feruloyl-CoA
YP_001748919.1	KEGG: psb:Psyr_2725 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001748920.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: dac:Daci_2761 acyl-CoA dehydrogenase domain protein
YP_001748921.1	PFAM: protein of unknown function DUF323; KEGG: mpt:Mpe_A2681 hypothetical protein
YP_001748922.1	PFAM: sulfatase; KEGG: pap:PSPA7_3903 arylsulfatase (AS) (aryl-sulfate sulphohydrolase)
YP_001748923.1	KEGG: pap:PSPA7_3902 hypothetical protein
YP_001748924.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: psb:Psyr_2731 general substrate transporter:major facilitator superfamily
YP_001748925.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: reh:H16_A2722 cytosine/adenosine deaminase
YP_001748926.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: pfl:PFL_5746 xanthine/uracil permease family protein
YP_001748927.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_2728 transcriptional regulator, LysR family
YP_001748928.1	KEGG: pfo:Pfl_2413 hypothetical protein
YP_001748929.1	KEGG: rme:Rmet_3749 hypothetical protein
YP_001748930.1	PFAM: protein of unknown function UPF0153; KEGG: bca:BCE_0834 hypothetical protein
YP_001748931.1	KEGG: rme:Rmet_3750 hypothetical protein
YP_001748932.1	KEGG: psa:PST_0849 predicted transcriptional regulator
YP_001748934.1	PFAM: 5-nucleotidase; KEGG: maq:Maqu_1307 5-nucleotidase
YP_001748935.1	similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs
YP_001748936.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_0120 short-chain dehydrogenase/reductase SDR
YP_001748937.1	PFAM: ThiJ/PfpI domain protein; KEGG: aav:Aave_0745 transcriptional regulator, fis family
YP_001748938.1	PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5231 major facilitator superfamily (MFS_1) transporter
YP_001748939.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bur:Bcep18194_B2780 amidohydrolase
YP_001748940.1	PFAM: regulatory protein TetR; KEGG: mlo:mlr0237 hypothetical protein
YP_001748941.1	PFAM: Glutathione S-transferase domain; KEGG: asa:ASA_2515 glutathione S-transferase family protein
YP_001748943.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN2997 methyl-accepting chemotaxis transducer
YP_001748944.1	PFAM: Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pen:PSEEN2996 Na+/H+ antiporter, NahC family
YP_001748945.1	PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family
YP_001748946.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN2994 transcriptional regulator, MarR family
YP_001748947.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2993 HlyD family secretion protein
YP_001748948.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2992 drug resistance transporter, EmrB/QacA family
YP_001748949.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pfo:Pfl_1969 esterase/lipase/thioesterase
YP_001748950.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1970 transcriptional regulator, LysR family
YP_001748951.1	KEGG: pen:PSEEN3331 hypothetical protein
YP_001748952.1	PFAM: MbtH domain protein; KEGG: pen:PSEEN3329 hypothetical protein
YP_001748953.1	PFAM: Thioesterase; KEGG: pen:PSEEN3328 thioesterase involved in non-ribosomal peptide biosynthesis
YP_001748954.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN3325 hydrolase, isochorismatase family
YP_001748955.1	PFAM: protein of unknown function DUF1615; KEGG: pen:PSEEN3324 hypothetical protein
YP_001748956.1	KEGG: pen:PSEEN3242 hypothetical protein
YP_001748957.1	PFAM: ABC-3 protein; KEGG: pen:PSEEN3241 cation ABC transporter, permease protein
YP_001748958.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3240 cation ABC transporter, ATP-binding protein
YP_001748959.1	PFAM: periplasmic solute binding protein; KEGG: pen:PSEEN3239 cation ABC transporter, periplasmic cation-binding protein
YP_001748960.1	KEGG: pen:PSEEN3238 hypothetical protein
YP_001748961.1	KEGG: pen:PSEEN3237 hypothetical protein
YP_001748962.1	KEGG: pen:PSEEN3236 hypothetical protein
YP_001748963.1	PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: pen:PSEEN3235 hypothetical protein
YP_001748964.1	KEGG: pen:PSEEN3223 L-ornithine N5-oxygenase PvdA
YP_001748965.1	KEGG: pen:PSEEN3219 hypothetical protein
YP_001748966.1	specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7
YP_001748967.1	KEGG: pen:PSEEN3216 hypothetical protein
YP_001748968.1	catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_001748969.1	KEGG: pen:PSEEN3213 hypothetical protein
YP_001748970.1	KEGG: pen:PSEEN3212 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001748971.1	KEGG: pen:PSEEN3211 transcriptional regulator MvaT, P16 subunit
YP_001748972.1	PFAM: outer membrane porin; KEGG: pen:PSEEN3209 OprD-like porin
YP_001748973.1	catalyzes the formation of precorrin 6x from precorrin 5
YP_001748974.1	PFAM: response regulator receiver; KEGG: pen:PSEEN3207 response regulator
YP_001748975.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: pen:PSEEN3205 sensor histidine kinase/response regulator (hybrid)
YP_001748976.1	PFAM: MCP methyltransferase CheR-type; KEGG: pen:PSEEN3204 chemotaxis protein methyltransferase, CheR-like
YP_001748977.1	PFAM: CheB methylesterase; KEGG: pen:PSEEN3203 methylesterase, CheB-like
YP_001748978.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3202 response regulator/sensor histidine kinase (hybrid)
YP_001748979.1	PFAM: response regulator receiver; KEGG: pen:PSEEN3201 response regulator
YP_001748980.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_001748981.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; Osmosensory transporter coiled coil; KEGG: stm:STM4290 proline/glycine betaine transporter
YP_001748982.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3287 transcriptional regulator, LysR family
YP_001748983.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN3288 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001748984.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_001748985.1	TIGRFAM: trehalose synthase; KEGG: psa:PST_0034 trehalose synthase
YP_001748986.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psp:PSPPH_2444 transcriptional regulator, LysR family
YP_001748987.1	PFAM: LamB/YcsF family protein; KEGG: pfl:PFL_4551 hypothetical protein
YP_001748988.1	PFAM: Allophanate hydrolase subunit 1; KEGG: psb:Psyr_2721 protein of unknown function DUF213
YP_001748989.1	KEGG: pfl:PFL_4547 UreA amidolyase-related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2
YP_001748990.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfo:Pfl_2462 TonB-dependent siderophore receptor
YP_001748991.1	KEGG: pen:PSEEN2355 hypothetical protein
YP_001748992.1	PFAM: Radical SAM domain protein; KEGG: pen:PSEEN2356 hypothetical protein
YP_001748993.1	PFAM: putative methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2364 hypothetical protein
YP_001748994.1	PFAM: Saccharopine dehydrogenase; KEGG: pen:PSEEN2365 hypothetical protein
YP_001748995.1	TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pen:PSEEN2366 carboxynorspermidine decarboxylase NspC
YP_001748996.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: psp:PSPPH_2817 phosphoesterase, putative
YP_001748997.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN2008 L-serine dehydratase
YP_001748998.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2622 transporter, MFS family
YP_001749001.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: pfl:PFL_4066 transcriptional regulator-related protein
YP_001749002.1	PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: pfl:PFL_4065 cyclic beta 1-2 glucan synthetase, putative
YP_001749003.1	PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0653 transcriptional regulator, TetR family
YP_001749004.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; cytochrome c class I; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: spe:Spro_2315 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_001749005.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pap:PSPA7_3672 probable oxidoreductase
YP_001749006.1	PFAM: regulatory protein MarR; KEGG: azc:AZC_2473 transcriptional regulator
YP_001749007.1	KEGG: spe:Spro_2312 hypothetical protein
YP_001749009.1	PFAM: monooxygenase FAD-binding; KEGG: spe:Spro_2311 monooxygenase FAD-binding
YP_001749010.1	PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2310 alpha/beta hydrolase fold
YP_001749011.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: spe:Spro_2309 Asp/Glu racemase
YP_001749012.1	PFAM: isochorismatase hydrolase; KEGG: spe:Spro_2308 N-carbamoylsarcosine amidase
YP_001749013.1	PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2307 major facilitator superfamily MFS_1
YP_001749014.1	PFAM: outer membrane porin; KEGG: psa:PST_1676 benzoate-specific porin
YP_001749015.1	proposed role in polysaccahride synthesis
YP_001749016.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pfl:PFL_5393 transcriptional regulator, IclR family
YP_001749017.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pfl:PFL_5392 oxidoreductase, putative
YP_001749018.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pfl:PFL_5391 hypothetical protein
YP_001749019.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: kpn:KPN_00384 hypothetical protein
YP_001749020.1	PFAM: NIPSNAP family containing protein; KEGG: kpn:KPN_00385 NIPSNAP
YP_001749021.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: kpn:KPN_00386 putative electron transfer flavoprotein-NAD/FAD/quinone oxidoreductase
YP_001749022.1	PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: bxe:Bxe_C0879 shikimate 5-dehydrogenase
YP_001749023.1	TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: kpn:KPN_00388 bacterial regulatory proteins, IclR
YP_001749024.1	PFAM: conserved hypothetical protein; KEGG: pfo:Pfl_4733 hypothetical protein
YP_001749025.1	PFAM: CsbD family protein; KEGG: pfo:Pfl_4351 CsbD-like
YP_001749026.1	KEGG: spe:Spro_2442 hypothetical protein
YP_001749027.1	KEGG: pfl:PFL_2568 sensory box transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001749028.1	KEGG: pfl:PFL_2569 hypothetical protein
YP_001749029.1	PFAM: gamma-glutamyltranspeptidase; KEGG: pmy:Pmen_3832 gamma-glutamyltransferase
YP_001749030.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pmy:Pmen_3833 transcriptional regulator, GntR family
YP_001749031.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pmy:Pmen_3834 amidohydrolase 3
YP_001749032.1	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_3835 ABC transporter related
YP_001749033.1	PFAM: inner-membrane translocator; KEGG: pmy:Pmen_3836 inner-membrane translocator
YP_001749034.1	PFAM: Extracellular ligand-binding receptor; KEGG: pmy:Pmen_3837 extracellular ligand-binding receptor
YP_001749035.1	KEGG: pmy:Pmen_3838 hypothetical protein
YP_001749036.1	KEGG: pfo:Pfl_3702 hypothetical protein
YP_001749037.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pap:PSPA7_4152 hypothetical protein
YP_001749038.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_2245 ABC transporter, transmembrane region
YP_001749039.1	KEGG: pfo:Pfl_4134 hypothetical protein
YP_001749040.1	PFAM: MscS Mechanosensitive ion channel; KEGG: psb:Psyr_1822 MscS mechanosensitive ion channel
YP_001749041.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; Mannitol dehydrogenase domain; KEGG: mfa:Mfla_1729 HAD-superfamily hydrolase subfamily IA, variant 3
YP_001749042.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: psb:Psyr_3141 type II and III secretion system protein:NolW-like
YP_001749043.1	KEGG: psp:PSPPH_3055 general secretion pathway protein GspN, putative
YP_001749044.1	KEGG: psp:PSPPH_3056 general secretion pathway protein GspM, putative
YP_001749045.1	PFAM: Fimbrial assembly family protein; KEGG: pst:PSPTO_3310 general secretion pathway protein L, putative
YP_001749046.1	KEGG: psp:PSPPH_3058 general secretion pathway protein GspK
YP_001749047.1	KEGG: pst:PSPTO_3312 general secretion pathway protein J, putative
YP_001749048.1	KEGG: psp:PSPPH_3060 general secretion pathway protein GspI
YP_001749049.1	TIGRFAM: general secretion pathway protein H; KEGG: psb:Psyr_3148 general secretion pathway protein H
YP_001749050.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: pst:PSPTO_3315 general secretion pathway protein G
YP_001749051.1	TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: psb:Psyr_3150 type II secretion system protein
YP_001749052.1	TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: pst:PSPTO_3317 general secretion pathway protein E
YP_001749054.1	PFAM: glycoside hydrolase family 3 domain protein; PA14 domain protein; KEGG: psb:Psyr_3035 glycoside hydrolase, family 3, N-terminal:glycoside hydrolase, family 3, C-terminal:glycoside hydrolase, family 3, C-terminal
YP_001749055.1	PFAM: regulatory protein TetR; KEGG: psb:Psyr_3036 regulatory protein, TetR
YP_001749056.1	PFAM: multi antimicrobial extrusion protein MatE; KEGG: pst:PSPTO_3172 hypothetical protein
YP_001749057.1	PFAM: DoxX family protein; KEGG: pen:PSEEN3277 hypothetical protein
YP_001749058.1	KEGG: pen:PSEEN3276 hypothetical protein
YP_001749059.1	PFAM: protein of unknown function DUF692; KEGG: pen:PSEEN3275 hypothetical protein
YP_001749060.1	KEGG: pen:PSEEN3274 hypothetical protein
YP_001749061.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001749062.1	PFAM: protein of unknown function DUF1109; KEGG: pen:PSEEN3271 hypothetical protein
YP_001749063.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN3199 transcriptional regulator, TetR family
YP_001749064.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pen:PSEEN3198 3-hydroxybutyryl-CoA dehydrogenase
YP_001749065.1	catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA
YP_001749066.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3196 transcriptional regulator, AraC family
YP_001749067.1	KEGG: pen:PSEEN3191 hypothetical protein
YP_001749068.1	PFAM: protein of unknown function DUF336; KEGG: pen:PSEEN3189 hypothetical protein
YP_001749069.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pen:PSEEN3188 glycolate oxidase subunit, FeS protein
YP_001749070.1	PFAM: FAD linked oxidase domain protein; KEGG: pen:PSEEN3187 glycolate oxidase, subunit GlcE
YP_001749071.1	TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein; KEGG: pen:PSEEN3186 glycolate oxidase, FAD-linked subunit
YP_001749072.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: psa:PST_0430 transcriptional regulator GlcC
YP_001749073.1	catalyzes the release of C-terminal glutamate residues from N-acylating moieties
YP_001749074.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN2379 hypothetical protein
YP_001749075.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl_0733 GCN5-related N-acetyltransferase
YP_001749076.1	PFAM: Glutathione S-transferase domain; KEGG: rle:RL1348 putative glutathione-S-transferase protein
YP_001749077.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bte:BTH_II1641 cytosine permease
YP_001749078.1	PFAM: purine catabolism PurC domain protein; KEGG: bte:BTH_II1640 DNA-binding protein
YP_001749079.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: psa:PST_3570 cytosine deaminase
YP_001749080.1	KEGG: pen:PSEEN2128 hypothetical protein
YP_001749081.1	KEGG: pen:PSEEN0150 transcriptional factor-related protein
YP_001749082.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN2394 transcriptional regulator, GntR family
YP_001749083.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN2395 gamma-aminobutyrate permease GabP-like
YP_001749085.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2396 trans-aconitate methyltransferase
YP_001749086.1	KEGG: pen:PSEEN2397 hypothetical protein
YP_001749087.1	TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2399 transcriptional regulator, LysR family
YP_001749088.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2400 sugar MFS transporter
YP_001749089.1	TIGRFAM: aminophosphonate oxidoreductase; PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2401 hypothetical protein
YP_001749090.1	PFAM: protein of unknown function DUF28; KEGG: pen:PSEEN2368 hypothetical protein
YP_001749091.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2369 transcriptional regulator, LysR family
YP_001749092.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; Pyridoxal-dependent decarboxylase; KEGG: pen:PSEEN2370 tyrosine decarboxylase
YP_001749093.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN2013 major facilitator family transporter
YP_001749094.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: pen:PSEEN2014 4-hydroxyphenylpyruvate dioxygenase
YP_001749095.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN2015 transcriptional regulator, TetR family
YP_001749096.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pen:PSEEN2335 transcriptional regulator, AraC family
YP_001749097.1	KEGG: pen:PSEEN2336 hypothetical protein
YP_001749098.1	KEGG: pen:PSEEN2759 hypothetical protein
YP_001749099.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN2309 hypothetical protein
YP_001749100.1	KEGG: pen:PSEEN2310 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001749101.1	PFAM: aldo/keto reductase; KEGG: pfl:PFL_5394 oxidoreductase, aldo/keto reductase family
YP_001749102.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN2407 hypothetical protein
YP_001749103.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1962 transcriptional regulator, LysR family
YP_001749104.1	TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: pen:PSEEN2372 catalase; hydroperoxidase HPI(I)
YP_001749105.1	PFAM: creatinase; peptidase M24; KEGG: pfl:PFL_5299 creatinase
YP_001749106.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pde:Pden_1693 major facilitator superfamily MFS_1
YP_001749107.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pmy:Pmen_0490 transcriptional regulator, AraC family
YP_001749108.1	catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome
YP_001749109.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pfo:Pfl_2170 putative diguanylate cyclase (GGDEF domain)
YP_001749110.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN2055 decarboxylase
YP_001749111.1	PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A1977 conserved hypothetical protein 698
YP_001749112.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1978 transcriptional regulator, LysR family
YP_001749113.1	KEGG: ncr:NCU07949.1 hypothetical protein
YP_001749114.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_001749115.1	KEGG: pen:PSEEN2059 nicotinamidase
YP_001749116.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN2060 hypothetical protein
YP_001749117.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN3342 transporter, NCS1 family
YP_001749118.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN3341 transcriptional regulator, AsnC family
YP_001749119.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3340 transporter, LysE family
YP_001749120.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: pen:PSEEN2026 sensor histidine kinase/response regulator hybrid
YP_001749121.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2027 sensor histidine kinase/response regulator hybrid
YP_001749122.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN2028 hydrolase, MutT/NUDIX family
YP_001749123.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN2029 transcriptional regulator, GntR family
YP_001749124.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: pen:PSEEN2030 gamma-carboxymuconolactone decarboxylase
YP_001749125.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: pen:PSEEN2031 oxidoreductase
YP_001749126.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN2032 aldehyde dehydrogenase
YP_001749127.1	PFAM: alpha/beta hydrolase fold; Ndr family protein; KEGG: pen:PSEEN2033 hydrolase, alpha/beta fold family
YP_001749128.1	PFAM: protein of unknown function DUF1185; KEGG: pen:PSEEN2034 hypothetical protein
YP_001749129.1	PFAM: luciferase family protein; KEGG: pen:PSEEN2035 monooxygenase, bacterial luciferase family
YP_001749130.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: pen:PSEEN2036 oxidoreductase
YP_001749131.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN2038 permease, cytosine/purines, uracil, thiamine, allantoin permease family
YP_001749132.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN2039 methyl-accepting chemotaxis transducer
YP_001749133.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2119 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001749135.1	KEGG: bur:Bcep18194_C6544 hypothetical protein
YP_001749136.1	PFAM: Integrase catalytic region; KEGG: mms:mma_0807 hypothetical protein
YP_001749141.1	KEGG: pap:PSPA7_3053 hypothetical protein
YP_001749142.1	KEGG: pfl:PFL_0750 hypothetical protein
YP_001749143.1	KEGG: eba:ebA2473 hypothetical gene
YP_001749144.1	KEGG: pap:PSPA7_3057 TnpT protein
YP_001749145.1	PFAM: integrase family protein; KEGG: pmy:Pmen_2249 phage integrase family protein
YP_001749146.1	KEGG: bte:BTH_I0097 hypothetical protein
YP_001749147.1	KEGG: bte:BTH_I0098 hypothetical protein
YP_001749148.1	KEGG: rxy:Rxyl_1791 adenine-specific DNA methylase containing a Zn-ribbon-like protein
YP_001749149.1	SMART: AAA ATPase; KEGG: rxy:Rxyl_1790 superfamily I DNA and RNA helicases and helicase subunits-like protein
YP_001749150.1	KEGG: sao:SAOUHSC_01931 hypothetical protein
YP_001749151.1	KEGG: psb:Psyr_5116 hypothetical protein
YP_001749152.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: psb:Psyr_5115 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
YP_001749153.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: psp:PSPPH_2856 methyl-accepting chemotaxis protein
YP_001749154.1	PFAM: aminotransferase class-III; KEGG: atc:AGR_L_242 hypothetical protein
YP_001749155.1	PFAM: Aldehyde Dehydrogenase_; KEGG: atu:Atu4762 succinate semialdehyde dehydrogenase
YP_001749156.1	PFAM: protein of unknown function DUF1185; KEGG: bam:Bamb_4326 protein of unknown function DUF1185
YP_001749157.1	PFAM: GAF domain protein; KEGG: bam:Bamb_4325 hypothetical protein
YP_001749158.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: bam:Bamb_4324 flavin reductase domain protein, FMN-binding
YP_001749159.1	PFAM: Aldehyde Dehydrogenase_; KEGG: bam:Bamb_4323 aldehyde dehydrogenase
YP_001749160.1	PFAM: luciferase family protein; KEGG: bam:Bamb_4322 luciferase family protein
YP_001749161.1	PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_4321 alpha/beta hydrolase fold
YP_001749162.1	KEGG: bam:Bamb_4319 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001749163.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pAT_304 high-affinity transport system for glycine betaine and proline
YP_001749164.1	with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine
YP_001749165.1	TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; KEGG: dac:Daci_2568 carboxymuconolactone decarboxylase
YP_001749166.1	PFAM: aldo/keto reductase; KEGG: rso:RS03071 putative oxidoreductase protein
YP_001749167.1	PFAM: LrgA family protein; KEGG: csa:Csal_1793 LrgA
YP_001749168.1	PFAM: LrgB family protein; KEGG: reu:Reut_A2795 LrgB-like protein
YP_001749169.1	PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: psa:PST_0550 malic enzyme
YP_001749170.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: pau:PA14_63080 L-lactate permease
YP_001749171.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_001749172.1	PFAM: protein of unknown function DUF336; KEGG: pmy:Pmen_0200 protein of unknown function DUF336
YP_001749173.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pmy:Pmen_0201 protein of unknown function DUF224, cysteine-rich region domain protein
YP_001749174.1	PFAM: FAD linked oxidase domain protein; KEGG: pmy:Pmen_0202 FAD linked oxidase domain protein
YP_001749175.1	TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein; KEGG: psa:PST_0431 glycolate oxidase, subunit GlcD
YP_001749176.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: psa:PST_0430 transcriptional regulator GlcC
YP_001749177.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001749178.1	PFAM: MOFRL domain protein; KEGG: pen:PSEEN1669 hydroxypyruvate reductase
YP_001749179.1	KEGG: pap:PSPA7_3831 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding
YP_001749180.1	KEGG: pfo:Pfl_1597 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel
YP_001749181.1	catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate
YP_001749182.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psa:PST_3113 transcriptional regulator, LysR family
YP_001749183.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0678 transcriptional regulator, LysR family
YP_001749184.1	KEGG: bxe:Bxe_B0677 hypothetical protein
YP_001749185.1	KEGG: azc:AZC_1360 sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001749186.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pfo:Pfl_2459 two component transcriptional regulator, LuxR family
YP_001749187.1	PFAM: response regulator receiver; KEGG: rpb:RPB_0182 response regulator receiver domain protein
YP_001749188.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pfo:Pfl_1418 chemotaxis sensory transducer
YP_001749189.1	KEGG: dar:Daro_3508 PAS:GGDEF
YP_001749190.1	PFAM: transposase Tn3 family protein; KEGG: pap:PSPA7_5337 transposase
YP_001749191.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: maq:Maqu_3982 resolvase, N-terminal domain
YP_001749192.1	TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bxe:Bxe_C1217 transcriptional regulator, MerR family
YP_001749193.1	KEGG: mms:mma_1753 organomercurial lyase
YP_001749194.1	TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: abo:ABO_1367 transcriptional regulator, MerR family
YP_001749195.1	KEGG: bxe:Bxe_C0883 heavy metal/H+ antiporter, CDF family
YP_001749196.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001749197.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: ilo:IL0633.1 Il-IS_2, transposase
YP_001749198.1	PFAM: small multidrug resistance protein; KEGG: rca:Rcas_0172 small multidrug resistance protein
YP_001749199.1	PFAM: small multidrug resistance protein; KEGG: gsu:GSU0708 multidrug resistance protein
YP_001749200.1	PFAM: regulatory protein ArsR; KEGG: hau:Haur_3282 transcriptional regulator, TrmB
YP_001749201.1	PFAM: Resolvase domain; KEGG: ppd:Ppro_3694 resolvase, N-terminal domain
YP_001749202.1	PFAM: regulatory protein LysR; KEGG: mpt:Mpe_A2330 putative transcription regulator protein
YP_001749203.1	KEGG: bvi:Bcep1808_7197 integrase, catalytic region
YP_001749204.1	PFAM: EAL domain protein; KEGG: rme:Rmet_6186 diguanylate phosphodiesterase (EAL domain)
YP_001749205.1	PFAM: MerE family protein; KEGG: rme:Rmet_6185 MerE
YP_001749206.1	TIGRFAM: mercuric resistence transcriptional repressor protein MerD; PFAM: regulatory protein MerR; KEGG: pap:PSPA7_0105 mercuric resistence transcriptional repressor protein MerD
YP_001749207.1	TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; Heavy metal transport/detoxification protein; KEGG: rme:Rmet_6183 mercuric reductase MerA
YP_001749208.1	TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein; KEGG: rme:Rmet_6173 mercuric transport protein periplasmic component
YP_001749209.1	PFAM: Mercuric transport protein MerT; KEGG: reu:Reut_D6497 mercuric transport protein MerT
YP_001749210.1	TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rme:Rmet_6344 transcriptional regulator, MerR family
YP_001749211.1	PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: eba:ebA163 sensory box/GGDEF family protein
YP_001749212.1	KEGG: fjo:Fjoh_3056 UBA/ThiF-type NAD/FAD binding protein
YP_001749213.1	KEGG: pna:Pnap_4928 hypothetical protein
YP_001749214.1	KEGG: pst:PSPTO_4755 hypothetical protein
YP_001749215.1	KEGG: pst:PSPTO_4329 ISPs1, transposase OrfA
YP_001749216.1	PFAM: transposase IS4 family protein; KEGG: pst:PSPTO_4328 ISPs1, transposase OrfB
YP_001749217.1	PFAM: Silent information regulator protein Sir2; KEGG: psp:PSPPH_4322 NAD-dependent deacetylase 4 (regulatory protein SIR2homolog 4)
YP_001749218.1	KEGG: pst:PSPTO_0585 hypothetical protein
YP_001749219.1	PFAM: helix-turn-helix domain protein; KEGG: psp:PSPPH_2800 transcriptional regulator, PbsX family
YP_001749220.1	KEGG: eba:ebA2473 hypothetical gene
YP_001749221.1	KEGG: asa:ASA_P4G008 hypothetical protein
YP_001749222.1	KEGG: pst:PSPTO_5590 ISPsy5, Orf1
YP_001749223.1	KEGG: xau:Xaut_3730 hypothetical protein
YP_001749224.1	KEGG: swi:Swit_1380 tetratricopeptide TPR_4
YP_001749225.1	KEGG: bam:Bamb_3947 peptidase S1 and S6, chymotrypsin/Hap
YP_001749226.1	KEGG: bte:BTH_II1813 hypothetical protein
YP_001749230.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ajs:Ajs_2120 transcriptional regulator, BadM/Rrf2 family
YP_001749231.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN1928 acetyltransferase, GNAT family
YP_001749232.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_001749233.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1930 transcriptional regulator, LysR family
YP_001749234.1	TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: pen:PSEEN1931 4-oxalocrotonate tautomerase
YP_001749235.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN1932 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001749236.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1933 transcriptional regulator, LysR family
YP_001749237.1	KEGG: pen:PSEEN1934 hypothetical protein
YP_001749238.1	PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: pen:PSEEN1937 hypothetical protein
YP_001749239.1	KEGG: hch:HCH_05630 hypothetical protein
YP_001749240.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: pen:PSEEN2353 hypothetical protein
YP_001749241.1	TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: psp:PSPPH_3023 AbrB protein
YP_001749242.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2331 transcriptional regulator, LysR family
YP_001749243.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pfo:Pfl_2451 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001749244.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pfo:Pfl_2453 transcriptional regulator, AraC family
YP_001749245.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3025 hypothetical protein
YP_001749246.1	PFAM: protein of unknown function DUF74; KEGG: pen:PSEEN3024 hypothetical protein
YP_001749247.1	KEGG: pen:PSEEN3023 hypothetical protein
YP_001749248.1	KEGG: pen:PSEEN3022 hypothetical protein
YP_001749249.1	KEGG: pen:PSEEN3020 hypothetical protein
YP_001749250.1	PFAM: beta-lactamase; KEGG: pen:PSEEN3018 beta-lactamase class C
YP_001749251.1	PFAM: Bile acid:sodium symporter; KEGG: pen:PSEEN3017 hypothetical protein
YP_001749252.1	KEGG: pen:PSEEN2061 hypothetical protein
YP_001749253.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN2062 transcriptional regulator, TetR family
YP_001749254.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN2063 oxidoreductase, short chain dehydrogenase/reductase family
YP_001749255.1	PFAM: DSBA oxidoreductase; KEGG: pen:PSEEN2064 2-hydroxychromene-2-carboxylate isomerase
YP_001749256.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2066 transcriptional regulator
YP_001749257.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2067 transporter, MFS family
YP_001749258.1	PFAM: cytochrome B561; KEGG: pen:PSEEN2068 cytochrome b561
YP_001749259.1	PFAM: Catalase domain protein; KEGG: pen:PSEEN2069 catalase
YP_001749260.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN2071 ECF sigma factor PrtI
YP_001749261.1	KEGG: pen:PSEEN2072 transmembrane regulator PrtR
YP_001749262.1	removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction
YP_001749263.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN2077 acetyltransferase, GNAT family
YP_001749264.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: pen:PSEEN2078 surface antigen
YP_001749265.1	PFAM: protein of unknown function DUF490; KEGG: pen:PSEEN2079 hypothetical protein
YP_001749266.1	KEGG: pfl:PFL_0780 hypothetical protein
YP_001749267.1	KEGG: pfl:PFL_0781 hypothetical protein
YP_001749268.1	KEGG: pen:PSEEN2080 hypothetical protein
YP_001749269.1	KEGG: pfl:PFL_0784 hypothetical protein
YP_001749270.1	KEGG: pen:PSEEN2081 hypothetical protein
YP_001749271.1	KEGG: pen:PSEEN2082 hypothetical protein
YP_001749272.1	PFAM: peptidase S45 penicillin amidase; KEGG: pen:PSEEN2083 penicillin amidase
YP_001749273.1	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine
YP_001749274.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: pen:PSEEN2085 peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
YP_001749275.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001749276.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_001749277.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2088 sensor histidine kinase
YP_001749278.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2089 DNA-binding response regulator
YP_001749279.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_001749280.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A1931 ABC-type transporter, duplicated ATPase domains:drug RA1 family
YP_001749281.1	KEGG: pen:PSEEN2091 hypothetical protein
YP_001749282.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN2092 hypothetical protein
YP_001749283.1	PFAM: Urease accessory protein UreD; KEGG: pen:PSEEN2093 urease accessory protein UreD
YP_001749284.1	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter
YP_001749285.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active
YP_001749286.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_001749287.1	involved in the assembly of the urease metallocenter; possible nickel donor
YP_001749288.1	PFAM: HupE/UreJ protein; KEGG: pen:PSEEN2098 urease accessory protein UreJ
YP_001749289.1	PFAM: Urease accessory protein UreF; KEGG: pen:PSEEN2099 urease accessory protein UreF
YP_001749290.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: pen:PSEEN2100 urease accessory protein UreG
YP_001749291.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Cache domain protein; KEGG: cko:CKO_00438 hypothetical protein
YP_001749292.1	PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: pen:PSEEN3016 hypothetical protein
YP_001749293.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN3015 hydrolase, haloacid dehalogenase-like family
YP_001749294.1	Represses a number of genes involved in the response to DNA damage
YP_001749295.1	KEGG: pen:PSEEN2413 hypothetical protein
YP_001749296.1	KEGG: pen:PSEEN2414 nucleotidyltransferase/DNA polymerase involved in DNA repair
YP_001749297.1	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.
YP_001749298.1	PFAM: aldo/keto reductase; KEGG: pen:PSEEN2462 oxidoreductase, aldo/keto reductase family
YP_001749299.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2463 transcriptional regulator, LysR family
YP_001749300.1	KEGG: pen:PSEEN2464 acetoacetyl-CoA transferase, alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_001749301.1	KEGG: pen:PSEEN2465 acetoacetyl-CoA transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_001749302.1	PFAM: short chain fatty acid transporter; KEGG: pen:PSEEN2481 short-chain fatty acid transporter (scFAT family)
YP_001749303.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pfl:PFL_3317 transcriptional regulator, AraC family
YP_001749304.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pfl:PFL_3318 efflux protein, LysE family
YP_001749305.1	PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: pen:PSEEN3059 hypothetical protein
YP_001749306.1	TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: pen:PSEEN3058 chloramphenicol-sensitive protein RarD
YP_001749307.1	PFAM: EAL domain protein; KEGG: pen:PSEEN3057 phosphodiesterase (EAL domain)
YP_001749308.1	KEGG: pen:PSEEN3055 hypothetical protein
YP_001749309.1	KEGG: pen:PSEEN3054 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase); TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001749310.1	KEGG: pfo:Pfl_2920 putative diguanylate phosphodiesterase (EAL domain)
YP_001749311.1	PFAM: ThiJ/PfpI domain protein; KEGG: pen:PSEEN3053 hypothetical protein
YP_001749312.1	KEGG: pen:PSEEN3051 sensory box histidine kinase/response regulator (hybrid); TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001749313.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_3246 sensor histidine kinase/response regulator
YP_001749314.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN3050 hypothetical protein
YP_001749315.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN2311 multidrug efflux RND outer membrane protein OprN
YP_001749316.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2312 acridine efflux pump (RND family)
YP_001749317.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2313 multidrug efflux RND membrane fusion protein MexE
YP_001749318.1	PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_2181 major facilitator superfamily
YP_001749319.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN2001 acetyltransferase, GNAT family
YP_001749320.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2002 transporter, LysE family
YP_001749321.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN2003 hydrolase, alpha/beta fold family
YP_001749322.1	PFAM: Pirin domain protein; KEGG: pen:PSEEN2646 hypothetical protein
YP_001749323.1	PFAM: protein of unknown function DUF1652; KEGG: pen:PSEEN2104 hypothetical protein
YP_001749324.1	KEGG: pen:PSEEN2105 hypothetical protein
YP_001749325.1	KEGG: pen:PSEEN2857 hypothetical protein
YP_001749326.1	PFAM: cytochrome d1 heme region; KEGG: pen:PSEEN2854 hypothetical protein
YP_001749327.1	PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN2853 Sco1/SenC family protein
YP_001749328.1	KEGG: pen:PSEEN2852 SCO1/SenC family protein
YP_001749329.1	KEGG: pen:PSEEN2851 cytochrome c
YP_001749330.1	KEGG: pen:PSEEN2850 hypothetical protein
YP_001749331.1	PFAM: response regulator receiver; KEGG: pen:PSEEN2849 response regulator
YP_001749332.1	PFAM: type II secretion system protein E; KEGG: pen:PSEEN2848 type II secretion system protein E
YP_001749333.1	KEGG: pen:PSEEN2847 hypothetical protein
YP_001749334.1	KEGG: pen:PSEEN2846 hypothetical protein
YP_001749335.1	KEGG: pen:PSEEN2845 hypothetical protein
YP_001749336.1	KEGG: pen:PSEEN2844 hypothetical protein
YP_001749337.1	PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; Tetratricopeptide TPR_2 repeat protein; KEGG: pen:PSEEN2843 secretion type II protein related to GspD (secretin) protein
YP_001749338.1	KEGG: pen:PSEEN2842 secretion type II protein related to protein G. signal peptide
YP_001749339.1	PFAM: type II secretion system protein G; KEGG: pen:PSEEN2841 secretion protein
YP_001749340.1	KEGG: pen:PSEEN2840 hypothetical protein
YP_001749341.1	chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex
YP_001749342.1	KEGG: pen:PSEEN2838 curli production assembly/transport component CsgF precursor
YP_001749343.1	PFAM: Curli production assembly/transport component CsgG; KEGG: pen:PSEEN2837 curli production assembly/transport component CsgG precursor
YP_001749344.1	PFAM: ribonuclease T2; KEGG: mlo:mll1611 probable ribonuclease
YP_001749345.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: pen:PSEEN2825 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions, repair of alkylated DNA
YP_001749346.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2914 hypothetical protein
YP_001749347.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2913 transcriptional regulator, LysR family
YP_001749348.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2912 transporter, MFS superfamily
YP_001749349.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2911 transporter, LysE family
YP_001749350.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pen:PSEEN2910 transcriptional regulator, AraC family
YP_001749351.1	PFAM: SCP-like extracellular; KEGG: pen:PSEEN2909 hypothetical protein
YP_001749352.1	PFAM: cell wall hydrolase SleB; KEGG: pen:PSEEN2908 hypothetical protein
YP_001749353.1	PFAM: Auxin Efflux Carrier; KEGG: pen:PSEEN2907 hypothetical protein
YP_001749354.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: bpe:BP2067 putative superoxide dismutase
YP_001749355.1	PFAM: lipid-binding START domain protein; KEGG: pen:PSEEN2926 hypothetical protein
YP_001749356.1	TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2925 hypothetical protein
YP_001749357.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pfo:Pfl_2169 hypothetical protein
YP_001749358.1	PFAM: PEBP family protein; KEGG: reu:Reut_B3733 YbhB and YbcL
YP_001749359.1	KEGG: pen:PSEEN2677 hypothetical protein
YP_001749360.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2678 hypothetical protein
YP_001749361.1	PFAM: Auxin Efflux Carrier; KEGG: pap:PSPA7_3571 hypothetical protein
YP_001749362.1	KEGG: pen:PSEEN2680 hypothetical protein
YP_001749363.1	PFAM: secretion protein HlyD family protein; KEGG: pfo:Pfl_3448 secretion protein HlyD
YP_001749364.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_3449 major facilitator superfamily MFS_1
YP_001749365.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: pfl:PFL_3691 UvrABC system, A protein
YP_001749366.1	TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: psp:PSPPH_0121 ImpA-related N-terminal family
YP_001749367.1	TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: psp:PSPPH_0122 hypothetical protein
YP_001749368.1	PFAM: OmpA/MotB domain protein; KEGG: psp:PSPPH_0123 OmpA domain protein
YP_001749369.1	KEGG: psb:Psyr_4963 hypothetical protein
YP_001749370.1	TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: psp:PSPPH_0125 ImcF-related family
YP_001749371.1	KEGG: psp:PSPPH_0126 hypothetical protein
YP_001749372.1	TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: psb:Psyr_4960 protein of unknown function DUF876
YP_001749373.1	KEGG: psp:PSPPH_0128 lipoprotein, putative
YP_001749374.1	KEGG: psb:Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001749375.1	TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: psp:PSPPH_0130 ImpH
YP_001749376.1	TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: psb:Psyr_4956 protein of unknown function DUF879
YP_001749377.1	TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: psp:PSPPH_0132 protein of unknown function (DUF1316) subfamily
YP_001749378.1	TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: psp:PSPPH_0133 hypothetical protein
YP_001749379.1	TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: psp:PSPPH_0134 hypothetical protein
YP_001749380.1	KEGG: psp:PSPPH_0135 hypothetical protein
YP_001749381.1	KEGG: psb:Psyr_4979 hypothetical protein
YP_001749382.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: psb:Psyr_4977 ADP-ribosylglycohydrolase
YP_001749383.1	KEGG: psb:Psyr_4979 hypothetical protein
YP_001749384.1	KEGG: psb:Psyr_4979 hypothetical protein
YP_001749385.1	KEGG: aav:Aave_3264 hypothetical protein
YP_001749386.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: psb:Psyr_4983 rhs element Vgr protein
YP_001749387.1	KEGG: psp:PSPPH_5070 hypothetical protein
YP_001749388.1	PFAM: Domain of unknown function DUF1795; KEGG: psp:PSPPH_5071 hypothetical protein
YP_001749389.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; PAAR repeat-containing protein; KEGG: psp:PSPPH_5072 rhs family protein
YP_001749390.1	KEGG: ypp:YPDSF_0223 hypothetical protein
YP_001749391.1	KEGG: psp:PSPPH_1452 hypothetical protein
YP_001749392.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: psp:PSPPH_5072 rhs family protein
YP_001749393.1	KEGG: aav:Aave_3473 hypothetical protein
YP_001749394.1	KEGG: shw:Sputw3181_3748 hypothetical protein
YP_001749395.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: psb:Psyr_4986 YD repeat
YP_001749396.1	KEGG: esa:ESA_03888 hypothetical protein
YP_001749397.1	KEGG: shw:Sputw3181_3749 hypothetical protein
YP_001749398.1	KEGG: psb:Psyr_4992 YD repeat
YP_001749400.1	KEGG: psb:Psyr_2605 transposase, putative
YP_001749402.1	KEGG: shw:Sputw3181_3749 hypothetical protein
YP_001749403.1	KEGG: psp:PSPPH_5073 hypothetical protein
YP_001749404.1	KEGG: stm:STM0294 putative cytoplasmic protein
YP_001749405.1	PFAM: aminoacyl-tRNA synthetase class I; KEGG: fjo:Fjoh_0894 hypothetical protein
YP_001749406.1	KEGG: esa:ESA_03898 hypothetical protein
YP_001749407.1	KEGG: psb:Psyr_4986 YD repeat
YP_001749409.1	KEGG: psb:Psyr_4986 YD repeat
YP_001749410.1	KEGG: pen:PSEEN3074 hypothetical protein
YP_001749411.1	KEGG: pen:PSEEN4574 hypothetical protein
YP_001749412.1	KEGG: pfo:Pfl_1291 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001749413.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfo:Pfl_1292 general substrate transporter
YP_001749414.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001749415.1	PFAM: regulatory protein IclR; KEGG: pfo:Pfl_1294 transcriptional regulator, IclR family
YP_001749416.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_2026 ABC transporter-like
YP_001749417.1	PFAM: protein of unknown function DUF214; KEGG: pfl:PFL_2229 ABC transporter, permease protein, putative
YP_001749418.1	KEGG: pfl:PFL_2230 lipoprotein, putative
YP_001749419.1	PFAM: aldo/keto reductase; KEGG: psb:Psyr_1790 aldo/keto reductase
YP_001749420.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbt:BBta_7356 putative transcriptional regulator, LysR family
YP_001749421.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2437 transcriptional regulator, LysR-family
YP_001749422.1	PFAM: pyruvate carboxyltransferase; KEGG: pna:Pnap_3685 pyruvate carboxyltransferase
YP_001749423.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2438 predicted acyl-CoA transferase/carnitine dehydratase
YP_001749424.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: bam:Bamb_2140 transferase hexapeptide repeat containing protein
YP_001749425.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_1316 general substrate transporter
YP_001749426.1	PFAM: outer membrane porin; KEGG: pae:PA0755 probable porin
YP_001749427.1	KEGG: pfl:PFL_0053 hypothetical protein
YP_001749428.1	PFAM: glucose-methanol-choline oxidoreductase; KEGG: pfo:Pfl_0085 glucose-methanol-choline oxidoreductase
YP_001749429.1	PFAM: cytochrome c class I; KEGG: pfl:PFL_0055 cytochrome c family protein
YP_001749430.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pau:PA14_35370 transcriptional regulator PtxS
YP_001749431.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pap:PSPA7_2980 hypothetical protein
YP_001749432.1	PFAM: PfkB domain protein; KEGG: pfo:Pfl_2902 PfkB
YP_001749433.1	PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA2262 probable 2-ketogluconate transporter
YP_001749434.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pfo:Pfl_2904 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001749435.1	PFAM: major facilitator superfamily MFS_1; KEGG: psa:PST_2918 major facilitator family transporter
YP_001749436.1	PFAM: amino acid permease-associated region; KEGG: msm:MSMEG_0446 putrescine importer
YP_001749437.1	PFAM: response regulator receiver; GAF domain protein; HWE histidine kinase; PAS fold-2 domain protein; KEGG: atc:AGR_C_3927 hypothetical protein
YP_001749438.1	KEGG: pen:PSEEN2696 hypothetical protein
YP_001749439.1	TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bmu:Bmul_5645 zinc-binding alcohol dehydrogenase family protein
YP_001749440.1	PFAM: protein of unknown function UPF0187; KEGG: psb:Psyr_1182 hypothetical protein
YP_001749441.1	KEGG: psb:Psyr_3532 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001749442.1	PFAM: protein of unknown function DUF330; KEGG: pfo:Pfl_2832 protein of unknown function DUF330
YP_001749443.1	PFAM: Mammalian cell entry related domain protein; KEGG: pfo:Pfl_2831 hypothetical protein
YP_001749444.1	PFAM: Paraquat-inducible protein A; KEGG: pfo:Pfl_2440 paraquat-inducible protein A
YP_001749445.1	PFAM: Paraquat-inducible protein A; KEGG: pfo:Pfl_2441 paraquat-inducible protein A
YP_001749446.1	KEGG: pfo:Pfl_2516 hypothetical protein
YP_001749447.1	KEGG: pen:PSEEN2728 lipoprotein
YP_001749448.1	KEGG: pen:PSEEN2729 hypothetical protein
YP_001749449.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pau:PA14_64810 vanillate O-demethylase oxidoreductase
YP_001749450.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: kpn:KPN_02032 putative hydrolase protein
YP_001749451.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A2015 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit
YP_001749452.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2014 ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit
YP_001749453.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_A2013 putative Rieske (2Fe-2S) family oxidoreductase, large subunit
YP_001749454.1	PFAM: NMT1/THI5 like domain protein; KEGG: kpn:KPN_02033 ABC transporter, periplasmic binding component-related protein
YP_001749455.1	KEGG: psa:PST_2862 nucleoside-binding outer membrane protein
YP_001749456.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pfl:PFL_5389 methyl-accepting chemotaxis transducer
YP_001749457.1	KEGG: psa:PST_0566 hypothetical protein
YP_001749458.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pst:PSPTO_3893 glyoxalase, putative
YP_001749459.1	KEGG: bmu:Bmul_5287 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_001749460.1	KEGG: bxe:Bxe_B0643 3-oxoadipate CoA-transferase subunit A (PcaI); TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_001749461.1	KEGG: mmw:Mmwyl1_1944 hypothetical protein
YP_001749462.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: rso:RSc0625 probable transcription regulator protein
YP_001749463.1	PFAM: dienelactone hydrolase; KEGG: pst:PSPTO_1580 hypothetical protein
YP_001749464.1	PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6467 major facilitator superfamily MFS_1
YP_001749465.1	KEGG: pen:PSEEN2766 hypothetical protein
YP_001749466.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pfo:Pfl_5353 peptidase C56, PfpI
YP_001749467.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pmy:Pmen_2360 short-chain dehydrogenase/reductase SDR
YP_001749469.1	PFAM: Integral membrane protein TerC; KEGG: pau:PA14_31610 putative membrane protein, TerC family
YP_001749470.1	PFAM: transcriptional regulator domain protein; KEGG: bch:Bcen2424_4616 two component transcriptional regulator, winged helix family
YP_001749471.1	cofactor involved in the reduction of disulfides
YP_001749472.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: pau:PA14_10840 putative dehydrogenase
YP_001749473.1	PFAM: Pyrrolo-quinoline quinone; KEGG: rsh:Rsph17029_3539 quinoprotein glucose dehydrogenase
YP_001749474.1	KEGG: rsh:Rsph17029_3538 glucose dehydrogenase-like protein
YP_001749475.1	PFAM: major facilitator superfamily MFS_1; KEGG: gox:GOX0208 putative glucarate/galactarate transporter
YP_001749476.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: reu:Reut_B4778 transketolase, central region:transketolase, C-terminal
YP_001749477.1	PFAM: Transketolase domain protein; KEGG: dac:Daci_0728 transketolase domain protein
YP_001749478.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ecj:JW0244 predicted DNA-binding transcriptional regulator
YP_001749479.1	PFAM: Spore germination protein; amino acid permease-associated region; KEGG: cmi:CMM_2217 putative gamma-aminobutyrate permease, APC family
YP_001749480.1	PFAM: FAD dependent oxidoreductase; KEGG: nca:Noca_3231 FAD dependent oxidoreductase
YP_001749481.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: mlo:mll2946 hypothetical protein
YP_001749482.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: pol:Bpro_4547 methylmalonate-semialdehyde dehydrogenase
YP_001749484.1	TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein; PaaX domain protein domain; KEGG: pen:PSEEN2789 transcriptional repressor for phenylacetic acid degradation
YP_001749485.1	TIGRFAM: phenylacetic acid degradation protein PaaY; KEGG: pen:PSEEN2790 regulatory PhaM protein
YP_001749486.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pen:PSEEN2791 enoyl-CoA hydratase/isomerase PhaA
YP_001749487.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001749488.1	converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation
YP_001749489.1	TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN2794 phenylacetic acid degradation protein
YP_001749490.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
YP_001749491.1	TIGRFAM: phenylacetate-CoA ligase; KEGG: pen:PSEEN2796 phenylacetyl-CoA ligase
YP_001749492.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA
YP_001749493.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation
YP_001749494.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: pen:PSEEN2800 phenylacetic acid degradation, subunit of multicomponent oxygenase
YP_001749495.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: pen:PSEEN2801 ring-hydroxylation complex protein 3
YP_001749496.1	TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN2802 ring-hydroxylation complex protein 4
YP_001749497.1	PFAM: protein of unknown function DUF485; KEGG: pen:PSEEN2803 hypothetical protein
YP_001749498.1	member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake
YP_001749499.1	PFAM: outer membrane porin; KEGG: pen:PSEEN2805 phenylacetic acid-specific porin
YP_001749500.1	catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA
YP_001749501.1	KEGG: pen:PSEEN3076 hypothetical protein
YP_001749502.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pst:PSPTO_1875 glutathione-dependent formaldehyde dehydrogenase
YP_001749503.1	KEGG: pmy:Pmen_2359 hypothetical protein
YP_001749504.1	PFAM: peptidase S14 ClpP; KEGG: pen:PSEEN3077 clp protease (protease subunit)
YP_001749505.1	PFAM: protein of unknown function DUF72; KEGG: psa:PST_2148 hypothetical protein
YP_001749506.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pen:PSEEN3079 DNase with DNase I-like domain
YP_001749507.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: pen:PSEEN3080 phospholipase (biosynthetic)
YP_001749508.1	KEGG: pen:PSEEN3081 hypothetical protein
YP_001749509.1	KEGG: pmy:Pmen_2289 hypothetical protein
YP_001749510.1	KEGG: pen:PSEEN2769 metallothionein
YP_001749511.1	KEGG: pen:PSEEN2768 hypothetical protein
YP_001749512.1	catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_001749513.1	KEGG: pen:PSEEN2765 acyl-CoA dehydrogenase
YP_001749514.1	PFAM: LmbE family protein; KEGG: pen:PSEEN2764 hypothetical protein
YP_001749515.1	PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2763 methyltransferase
YP_001749516.1	PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN2762 glycosyl transferase, group 2 family protein
YP_001749517.1	TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: pen:PSEEN2761 Ku protein
YP_001749518.1	KEGG: fjo:Fjoh_3241 nucleoside phosphorylase-like protein
YP_001749519.1	PFAM: methyltransferase small; Methyltransferase type 12; KEGG: pen:PSEEN3085 DNA methylase
YP_001749520.1	KEGG: pen:PSEEN3086 hypothetical protein
YP_001749521.1	KEGG: pen:PSEEN3087 hypothetical protein
YP_001749522.1	PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_1799 major facilitator superfamily MFS_1
YP_001749523.1	PFAM: aldo/keto reductase; KEGG: mfa:Mfla_1798 twin-arginine translocation pathway signal
YP_001749524.1	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: pen:PSEEN3113 Dyp-type peroxidase
YP_001749525.1	PFAM: Bile acid:sodium symporter; KEGG: pen:PSEEN3114 transporter, bile acid/Na+ symporter family
YP_001749526.1	PFAM: fatty acid hydroxylase; KEGG: pen:PSEEN3115 beta-carotene hydroxylase
YP_001749527.1	PFAM: MgtC/SapB transporter; KEGG: pen:PSEEN3117 magnesium transporter, MgtC family
YP_001749528.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN3122 diguanylate cyclase (GGDEF domain)
YP_001749529.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pfo:Pfl_1868 exodeoxyribonuclease III xth
YP_001749530.1	KEGG: pfo:Pfl_2029 hypothetical protein
YP_001749531.1	KEGG: pfl:PFL_4730 lipoprotein, putative
YP_001749532.1	KEGG: pfo:Pfl_4133 hypothetical protein
YP_001749533.1	KEGG: pen:PSEEN2808 Tn4652 cointegrate resolution protein T
YP_001749534.1	PFAM: YheO domain protein; KEGG: pen:PSEEN5014 hypothetical protein
YP_001749535.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN5013 threonine dehydratase
YP_001749536.1	catalyzes the formation of L-proline from L-ornithine
YP_001749537.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: nca:Noca_2609 choline/carnitine/betaine transporter
YP_001749538.1	PFAM: TENA/THI-4 domain protein; KEGG: nwi:Nwi_0858 TenA/THI-4 protein
YP_001749539.1	PFAM: TENA/THI-4 domain protein; KEGG: pde:Pden_3673 transcriptional activator, TenA family
YP_001749540.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pen:PSEEN2876 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains)
YP_001749541.1	PFAM: integrase family protein; KEGG: pap:PSPA7_3058 cointegrate resolution protein S
YP_001749542.1	PFAM: short-chain dehydrogenase/reductase SDR; SMP-30/Gluconolaconase/LRE domain protein; KEGG: ent:Ent638_1528 short-chain dehydrogenase/reductase SDR
YP_001749543.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2294 transcriptional regulator, LysR family
YP_001749544.1	KEGG: pau:PA14_00640 potential phenazine-modifying enzyme; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase
YP_001749545.1	PFAM: Amidase; KEGG: mes:Meso_2714 amidase
YP_001749546.1	KEGG: aha:AHA_3393 acyl-coenzyme A synthetase
YP_001749549.1	PFAM: Prenyltransferase/squalene oxidase; KEGG: pen:PSEEN4746 protein farnesyltransferase
YP_001749550.1	KEGG: stp:Strop_1038 hypothetical protein
YP_001749551.1	PFAM: glycerate kinase; KEGG: pen:PSEEN2878 glycerate kinase
YP_001749552.1	PFAM: sugar diacid recognition domain protein; KEGG: pen:PSEEN2879 sugar diacid utilization regulator
YP_001749553.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2880 transporter, MFS family
YP_001749554.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: pen:PSEEN3126 ferredoxin reductase component
YP_001749555.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: azo:azo3875 sigma-54-dependent transcriptional regulator
YP_001749556.1	PFAM: Aldehyde Dehydrogenase_; KEGG: dac:Daci_0293 aldehyde dehydrogenase
YP_001749557.1	KEGG: azo:azo3022 putative quinoprotein ethanol dehydrogenase; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; cytochrome c class I
YP_001749558.1	FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide
YP_001749559.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3132 transcriptional regulator, LysR family
YP_001749560.1	PFAM: TraX family protein; KEGG: pmy:Pmen_2245 TraX family protein
YP_001749561.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: pen:PSEEN3133 membrane bound hydrolase
YP_001749562.1	PFAM: outer membrane porin; KEGG: pen:PSEEN3134 benzoate-specific porin
YP_001749563.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: pen:PSEEN3135 benzoate membrane transport protein MFS superfamily)
YP_001749564.1	TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: pen:PSEEN3136 catechol 1,2-dioxygenase
YP_001749565.1	KEGG: pen:PSEEN3137 muconolactone delta-isomerase (MIase); TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase
YP_001749566.1	TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pen:PSEEN3138 muconate cycloisomerase I (cis,cis-muconate lactonizing enzyme I) (MLE)
YP_001749567.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN3139 benzoate transport protein (MFS superfamily)
YP_001749568.1	catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol
YP_001749569.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: pen:PSEEN3141 benzoate 1,2-dioxygenase electron transfer component includes: ferredoxin; ferredoxin--NAD(+) reductase
YP_001749570.1	KEGG: pen:PSEEN3142 benzoate 1,2-dioxygenase beta subunit; TIGRFAM: benzoate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit
YP_001749571.1	TIGRFAM: benzoate 1,2-dioxygenase, large subunit; PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: pen:PSEEN3143 benzoate 1,2-dioxygenase alpha subunit
YP_001749572.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive
YP_001749573.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pen:PSEEN3151 peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
YP_001749574.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN3152 ABC transporter, periplasmic binding protein
YP_001749575.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3153 ABC transporter, permease protein
YP_001749576.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3154 ABC transporter, permease protein
YP_001749577.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN3155 sigma-54 dependent transcriptional regulator
YP_001749578.1	PFAM: Citrate transporter; KEGG: pen:PSEEN3157 hypothetical protein
YP_001749579.1	catalyzes the formation of acetoacetate from 3-hydroxybutyrate
YP_001749580.1	serine protease inhibitor, inhibits trypsin and other proteases
YP_001749581.1	AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase
YP_001749582.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pen:PSEEN3160 peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
YP_001749583.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3162 transporter, LysE family
YP_001749584.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN3163 transcriptional regulator, AraC family
YP_001749585.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3164 transporter, LysE family
YP_001749586.1	PFAM: metallophosphoesterase; KEGG: pen:PSEEN3165 serine/threonine protein phosphatase
YP_001749587.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rca:Rcas_0871 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001749588.1	KEGG: pen:PSEEN3168 hypothetical protein
YP_001749589.1	KEGG: pen:PSEEN3169 methylated-DNA--protein-cysteine methyltransferase (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase); TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_001749590.1	KEGG: psb:Psyr_2496 lipopolysaccharide core biosynthesis domain protein
YP_001749592.1	KEGG: pfo:Pfl_3288 hypothetical protein
YP_001749593.1	KEGG: pen:PSEEN3170 hypothetical protein
YP_001749594.1	KEGG: syn:slr0334 hypothetical protein
YP_001749595.1	KEGG: pen:PSEEN3022 hypothetical protein
YP_001749596.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfo:Pfl_2468 short-chain dehydrogenase/reductase SDR
YP_001749597.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: psa:PST_2264 transcriptional regulator
YP_001749598.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psa:PST_2903 probable short-chain dehydrogenase
YP_001749599.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pae:PA2047 probable transcriptional regulator
YP_001749600.1	KEGG: psp:PSPPH_4090 GP28
YP_001749601.1	KEGG: psb:Psyr_4084 hypothetical protein
YP_001749602.1	KEGG: psb:Psyr_4083 PaaR
YP_001749603.1	KEGG: pst:PSPTO_5054 hypothetical protein
YP_001749604.1	KEGG: psb:Psyr_4081 hypothetical protein
YP_001749605.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: psb:Psyr_4080 rhs element Vgr protein
YP_001749606.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: psp:PSPPH_B0004 RulB protein
YP_001749607.1	PFAM: peptidase S24 and S26 domain protein; KEGG: psb:Psyr_2762 peptidase S24, S26A and S26B
YP_001749608.1	PFAM: protein of unknown function DUF159; KEGG: psb:Psyr_2763 protein of unknown function DUF159
YP_001749610.1	KEGG: dac:Daci_1611 integrase family protein
YP_001749611.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3176 ABC transporte, ATP binding protein
YP_001749612.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2927 transporter
YP_001749613.1	FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds
YP_001749614.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2930 transcriptional regulator, LysR family
YP_001749615.1	PFAM: protein of unknown function DUF419; KEGG: pen:PSEEN2931 hypothetical protein
YP_001749616.1	PFAM: protein of unknown function DUF1294; KEGG: pen:PSEEN2932 hypothetical protein
YP_001749617.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_001749618.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: pen:PSEEN2935 methyl-accepting chemotaxis transducer
YP_001749619.1	KEGG: pfl:PFL_2485 hypothetical protein
YP_001749620.1	KEGG: pen:PSEEN2936 hypothetical protein
YP_001749621.1	TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: pen:PSEEN2937 nicotinamide mononucleotide transporter PnuC
YP_001749622.1	KEGG: pen:PSEEN2938 hypothetical protein
YP_001749623.1	KEGG: pen:PSEEN2939 hypothetical protein
YP_001749624.1	KEGG: pen:PSEEN2940 hypothetical protein
YP_001749625.1	KEGG: pen:PSEEN2941 hypothetical protein
YP_001749626.1	PFAM: peptidase C39 bacteriocin processing; KEGG: pen:PSEEN2942 hypothetical protein
YP_001749627.1	KEGG: pen:PSEEN2943 hypothetical protein
YP_001749628.1	KEGG: pen:PSEEN2944 hypothetical protein
YP_001749629.1	PFAM: sulfatase; KEGG: pen:PSEEN2945 sulfatase
YP_001749630.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN2438 sigma-54 dependent transcriptional regulator
YP_001749631.1	KEGG: pen:PSEEN2436 hypothetical protein
YP_001749632.1	KEGG: pen:PSEEN2435 hypothetical protein
YP_001749633.1	KEGG: pen:PSEEN2434 magnesium chelatase, subunit ChII; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001749634.1	with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism
YP_001749635.1	TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pen:PSEEN2432 cobalamin biosynthesis protein CobW
YP_001749636.1	KEGG: ddi:DDBDRAFT_0201987 hypothetical protein
YP_001749637.1	TIGRFAM: cobalt transporter, subunit CbtB; PFAM: Cobalt transporter subunit CbtB putative; KEGG: pen:PSEEN2431 hypothetical protein
YP_001749638.1	TIGRFAM: cobalt transporter, subunit CbtA; PFAM: Cobalt transporter subunit CbtA putative; KEGG: pen:PSEEN2429 cobalt transporter subunit CbtA
YP_001749639.1	KEGG: pen:PSEEN2428 cobalamin biosynthesis protein CobE
YP_001749640.1	KEGG: pen:PSEEN2427 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_001749641.1	PFAM: protein of unknown function DUF1272; KEGG: pen:PSEEN2426 hypothetical protein
YP_001749642.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN2425 DNA-binding response regulator, LuxR family
YP_001749643.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN2424 sensor histidine kinase/response regulator
YP_001749644.1	KEGG: pen:PSEEN2423 methyl-accepting chemotaxis transducer/sensory box protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001749645.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pen:PSEEN2422 transcriptional regulator, LacI family
YP_001749646.1	TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: pen:PSEEN2421 gluconokinase
YP_001749647.1	TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: pen:PSEEN2420 gluconate permease (GntP family)
YP_001749648.1	KEGG: pen:PSEEN2419 hypothetical protein
YP_001749649.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN2418 sigma-54 dependent transcriptional regulator, fis family/response regulator
YP_001749650.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2417 sensor histidine kinase
YP_001749651.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2416 sensor histidine kinase
YP_001749652.1	PFAM: Lytic transglycosylase catalytic; KEGG: pen:PSEEN2461 lytic transglycosylase
YP_001749653.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: pen:PSEEN2460 probable type II secretion system protein G
YP_001749654.1	PFAM: type II secretion system protein; KEGG: pen:PSEEN2459 type II secretion pathway protein F
YP_001749655.1	PFAM: integrase family protein; KEGG: pen:PSEEN2998 site-specific recombinase, phage integrase family
YP_001749656.1	PFAM: protein of unknown function DUF1345; KEGG: pen:PSEEN3002 hypothetical protein
YP_001749657.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: pen:PSEEN3003 aspartate aminotransferase
YP_001749658.1	PFAM: protein of unknown function DUF1652; KEGG: pen:PSEEN3004 hypothetical protein
YP_001749659.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: pen:PSEEN2858 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains)
YP_001749660.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN2676 outer membrane protein precursor
YP_001749661.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2675 multidrug resistance efflux pump
YP_001749662.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2674 multidrug resistance efflux transporter
YP_001749663.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2673 multidrug resistance efflux pump; membrane fusion protein
YP_001749664.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN2672 thiol peroxidase
YP_001749665.1	PFAM: Amino acid transporter transmembrane; KEGG: pen:PSEEN2671 serine transport protein
YP_001749666.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_001749667.1	PFAM: Malate/L-lactate dehydrogenase; KEGG: pen:PSEEN2669 malate dehydrogenase
YP_001749668.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pen:PSEEN2668 transcriptional regulator, RpiR family
YP_001749669.1	PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN2667 amino acid ABC transporter, periplasmic binding protein
YP_001749670.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN2666 amino acid ABC transporter, permease protein
YP_001749671.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN2665 amino acid ABC transporter, permease protein
YP_001749672.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2664 D-amino acid dehydrogenase, small subunit family protein
YP_001749673.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN2663 amino acid ABC transporter, ATP-binding protein
YP_001749674.1	PFAM: peptidase C26; KEGG: pen:PSEEN2659 glutamine amidopeptidase (class I)
YP_001749675.1	catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate
YP_001749676.1	TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2657 D-galactonate permease
YP_001749677.1	KEGG: pen:PSEEN2656 D-galactarate dehydrogenase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein
YP_001749678.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN2655 ketoglutarate semialdehyde dehydrogenase
YP_001749679.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN2654 transcriptional regulator, GntR family
YP_001749680.1	KEGG: pen:PSEEN2653 hypothetical protein
YP_001749681.1	KEGG: pen:PSEEN2652 hypothetical protein
YP_001749682.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pae:PA2681 probable transcriptional regulator
YP_001749683.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dac:Daci_5626 alcohol dehydrogenase zinc-binding domain protein
YP_001749684.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pfl:PFL_6147 YeeE/YedE family protein
YP_001749685.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_4324 transcriptional regulator, LysR family
YP_001749686.1	PFAM: protein of unknown function DUF606; KEGG: dac:Daci_4323 protein of unknown function DUF606
YP_001749687.1	KEGG: pen:PSEEN2168 hypothetical protein
YP_001749688.1	KEGG: psp:PSPPH_1743 L-sorbosone dehydrogenase
YP_001749689.1	KEGG: pst:PSPTO_3688 hypothetical protein
YP_001749690.1	KEGG: pfo:Pfl_2311 hypothetical protein
YP_001749691.1	KEGG: pst:PSPTO_1341 hypothetical protein
YP_001749692.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pfo:Pfl_2092 UbiE/COQ5 methyltransferase
YP_001749693.1	PFAM: OsmC family protein; protein of unknown function DUF181; KEGG: pen:PSEEN3294 hypothetical protein
YP_001749694.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pen:PSEEN2172 isoquinoline 1-oxidoreductase, alpha subunit
YP_001749695.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pen:PSEEN2171 isoquinoline 1-oxidoreductase, beta subunit
YP_001749696.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN2170 cytochrome c
YP_001749697.1	PFAM: protein of unknown function DUF182; KEGG: pen:PSEEN2169 hypothetical protein
YP_001749698.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN2979 hypothetical protein
YP_001749700.1	Involved in the tartrate degradation pathway
YP_001749701.1	Involved in the tartrate degradation pathway
YP_001749702.1	PFAM: sodium:dicarboxylate symporter; KEGG: rso:RSp0995 probable C4-dicarboxylate transport transmembrane protein
YP_001749703.1	KEGG: pfo:Pfl_2136 hypothetical protein
YP_001749704.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bja:bll6916 hypothetical protein
YP_001749705.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_0784 short-chain dehydrogenase/reductase SDR
YP_001749706.1	PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_3421 major facilitator superfamily MFS_1
YP_001749707.1	PFAM: amidohydrolase 2; KEGG: spe:Spro_2095 amidohydrolase 2
YP_001749708.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_1436 transcriptional regulator, LysR family
YP_001749709.1	KEGG: psp:PSPPH_2654 lipoprotein, putative
YP_001749710.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN3260 hypothetical protein
YP_001749711.1	KEGG: pen:PSEEN3302 hypothetical protein
YP_001749712.1	KEGG: pen:PSEEN3354 hypothetical protein
YP_001749713.1	PFAM: protein of unknown function DUF692; KEGG: pen:PSEEN3355 hypothetical protein
YP_001749714.1	KEGG: pen:PSEEN3356 hypothetical protein
YP_001749715.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pst:PSPTO_4652 iron-sulfur cluster-binding protein
YP_001749716.1	PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: psp:PSPPH_4342 oxidoreductase, molybdopterin-binding subunit
YP_001749717.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pst:PSPTO_4650 aldehyde oxidase and xanthine dehydrogenase family protein
YP_001749718.1	KEGG: bja:blr2180 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001749719.1	KEGG: pfl:PFL_2959 hypothetical protein
YP_001749720.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_2411 short-chain dehydrogenase/reductase SDR
YP_001749721.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pau:PA14_36520 hypothetical protein
YP_001749722.1	KEGG: psb:Psyr_0115 hypothetical protein
YP_001749723.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_001749724.1	KEGG: psp:PSPPH_1250 hypothetical protein
YP_001749725.1	PFAM: protein of unknown function DUF1289; KEGG: pen:PSEEN3298 hypothetical protein
YP_001749726.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: psa:PST_2508 methyl-accepting chemotaxis transducer
YP_001749727.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2387 transcriptional regulator, LysR family
YP_001749728.1	KEGG: pen:PSEEN2386 hypothetical protein
YP_001749729.1	PFAM: protein of unknown function DUF633; KEGG: pen:PSEEN2384 hypothetical protein
YP_001749730.1	PFAM: Endoribonuclease L-PSP; KEGG: pen:PSEEN2383 endoribonuclease, L-PSP family
YP_001749731.1	PFAM: peptidase U32; KEGG: pen:PSEEN3060 peptidase, U32 family
YP_001749732.1	PFAM: aminotransferase class-III; KEGG: pen:PSEEN2885 aminotransferase, class III
YP_001749733.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN2886 aldehyde dehydrogenase
YP_001749734.1	PFAM: regulatory protein LuxR; KEGG: pen:PSEEN2887 transcriptional regulator, LuxR family
YP_001749735.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_5811 malonate utilization transcriptional regulator
YP_001749736.1	TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: pae:PA0216 probable transporter
YP_001749737.1	TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: pap:PSPA7_0299 malonate transporter, MadL subunit
YP_001749738.1	TIGRFAM: malonate decarboxylase, epsilon subunit; PFAM: Acyl transferase; KEGG: psa:PST_4114 malonyl CoA-acyl carrier protein transacylase
YP_001749739.1	Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein
YP_001749740.1	TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: psa:PST_4116 malonate decarboxylase gamma subunit
YP_001749741.1	The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A
YP_001749742.1	acyl carrier protein of malonate decarboxylase
YP_001749743.1	catalyzes the reversible formation of 2'-(5''-triphosphoribosyl)-3'dephospho-CoA from 3-dephospho-CoA
YP_001749744.1	TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: psa:PST_4120 malonate decarboxylase alpha subunit
YP_001749745.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pen:PSEEN2888 enoyl-CoA hydratase
YP_001749746.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN2889 acyl-CoA dehydrogenase
YP_001749747.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN3012 benABC operon transcriptional activator BenR
YP_001749748.1	KEGG: pfo:Pfl_1951 hypothetical protein
YP_001749749.1	KEGG: pfl:PFL_2174 hypothetical protein
YP_001749750.1	TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: pen:PSEEN3013 inositol monophosphatase
YP_001749751.1	PFAM: UspA domain protein; KEGG: pen:PSEEN2890 universal stress protein
YP_001749752.1	TIGRFAM: TonB-dependent siderophore receptor; outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfo:Pfl_2232 TonB-dependent siderophore receptor
YP_001749753.1	KEGG: pen:PSEEN2891 hypothetical protein
YP_001749754.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2894 transcriptional regulator, LysR family
YP_001749755.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN2895 aldehyde dehydrogenase
YP_001749756.1	KEGG: pca:Pcar_0793 hypothetical protein
YP_001749757.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN2898 transcriptional regulator, AraC family
YP_001749758.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN2899 glutamine synthetase
YP_001749759.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN2900 putrescine ABC transporter, periplasmic putrescine-binding protein
YP_001749760.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2901 oxidoreductase
YP_001749761.1	KEGG: pen:PSEEN2454 L-serine deaminase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_001749762.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2453 transcriptional regulator, LysR family
YP_001749763.1	PFAM: sulfatase; KEGG: bfs:BF3209 putative sulfatase
YP_001749764.1	KEGG: pen:PSEEN2452 lipopolysaccharide biosynthesis sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_001749765.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: pen:PSEEN2451 glycosyl transferase, WecB/TagA/CpsF family
YP_001749766.1	PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN2450 glycosyl transferase, group 2 family protein
YP_001749767.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN2449 glycosyl transferase, group 1 family protein
YP_001749768.1	PFAM: protein of unknown function DUF535; KEGG: pen:PSEEN2448 glycosyl transferase
YP_001749769.1	PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN2447 glycosyl transferase, group 2 family
YP_001749770.1	KEGG: pen:PSEEN2446 serine O-acetyltransferase
YP_001749771.1	PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN2445 glycosyl transferase
YP_001749772.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: pen:PSEEN2444 hypothetical protein
YP_001749773.1	PFAM: FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: pen:PSEEN2443 oxidoreductase
YP_001749774.1	PFAM: polysaccharide biosynthesis protein; KEGG: pen:PSEEN2442 transporter
YP_001749775.1	KEGG: pen:PSEEN2441 hypothetical protein
YP_001749776.1	KEGG: pen:PSEEN2440 hypothetical protein
YP_001749777.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pen:PSEEN2439 UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase)
YP_001749778.1	KEGG: pen:PSEEN2946 exopolysaccharide biosynthesis related tyrosine-protein kinase
YP_001749779.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: pen:PSEEN2947 exopolysaccharide transport protein
YP_001749780.1	KEGG: pen:PSEEN2948 hypothetical protein
YP_001749781.1	PFAM: polysaccharide export protein; KEGG: pen:PSEEN2949 polysaccharide export protein
YP_001749782.1	KEGG: pen:PSEEN2950 hypothetical protein
YP_001749783.1	KEGG: pen:PSEEN2951 hypothetical protein
YP_001749784.1	KEGG: pen:PSEEN2952 hypothetical protein
YP_001749785.1	KEGG: pen:PSEEN2953 hypothetical protein
YP_001749786.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pen:PSEEN2954 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains)
YP_001749787.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN2956 NAD-dependent aldehyde dehydrogenase
YP_001749788.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN2957 hypothetical protein
YP_001749789.1	KEGG: pen:PSEEN2958 hypothetical protein
YP_001749790.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_001749791.1	PFAM: transmembrane pair domain protein; KEGG: pen:PSEEN2961 hypothetical protein
YP_001749792.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pen:PSEEN2963 UDP-N-acetyl glucosamine-2-epimerase
YP_001749793.1	PFAM: General secretory system II protein E domain protein; KEGG: pen:PSEEN2964 bacteriophage receptor protein NfrB
YP_001749794.1	KEGG: pen:PSEEN2965 hypothetical protein
YP_001749795.1	KEGG: pen:PSEEN2966 hypothetical protein
YP_001749796.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2968 sensor histidine kinase
YP_001749797.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2969 response regulator
YP_001749798.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2970 multidrug efflux RND membrane fusion protein
YP_001749799.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2971 multidrug/solvent RND transporter, AcrB-like
YP_001749800.1	KEGG: esa:ESA_04306 hypothetical protein
YP_001749801.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; PFAM: filamentation induced by cAMP protein Fic; KEGG: esa:ESA_04305 hypothetical protein
YP_001749802.1	activates fatty acids by binding to coenzyme A
YP_001749803.1	KEGG: pen:PSEEN2974 quinohemoprotein amine dehydrogenase 40 kDa subunit
YP_001749804.1	PFAM: Quinohemoprotein amine dehydrogenase gamma subunit; KEGG: pen:PSEEN2975 quinohemoprotein amine dehydrogenase gamma subunit
YP_001749805.1	PFAM: Radical SAM domain protein; KEGG: pen:PSEEN2976 hypothetical protein
YP_001749806.1	PFAM: Quinohemoprotein amine dehydrogenase A alpha subunit haem binding; Domain of unknown function DUF1927; Domain of unknown function DUF1928; KEGG: pen:PSEEN2977 quinohemoprotein amine dehydrogenase 60 kDa subunit
YP_001749807.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN2978 NAD-dependent aldehyde dehydrogenase
YP_001749808.1	KEGG: pen:PSEEN3112 hypothetical protein
YP_001749809.1	PFAM: monooxygenase FAD-binding; KEGG: pen:PSEEN2817 hypothetical protein
YP_001749810.1	KEGG: pen:PSEEN2818 hypothetical protein
YP_001749811.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN2819 ABC efflux transporter, permease/ATP-binding protein
YP_001749812.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN2820 sigma-54 dependent transcriptional regulator
YP_001749813.1	KEGG: pen:PSEEN2821 hypothetical protein
YP_001749814.1	KEGG: pen:PSEEN2822 hypothetical protein
YP_001749815.1	PFAM: Curlin associated repeat protein; KEGG: pen:PSEEN2823 curli fiber surface-exposed nucleator CsgB
YP_001749816.1	PFAM: Curlin associated repeat protein; KEGG: pen:PSEEN2824 curlin; signal peptide
YP_001749817.1	TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: pen:PSEEN2918 quinate dehydrogenase (pyrroloquinoline-quinone)
YP_001749818.1	PFAM: Carbohydrate-selective porin OprB; KEGG: pfo:Pfl_2711 carbohydrate-selective porin OprB
YP_001749819.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine
YP_001749820.1	PFAM: protein of unknown function DUF1028; KEGG: pen:PSEEN2649 hypothetical protein
YP_001749821.1	KEGG: pen:PSEEN2648 oxidoreductase, PNDR family (class II)
YP_001749822.1	PFAM: Endoribonuclease L-PSP; KEGG: pen:PSEEN2647 hypothetical protein
YP_001749823.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2103 transcriptional regulator, LysR family
YP_001749824.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN3005 hypothetical protein
YP_001749825.1	KEGG: pen:PSEEN3006 hypothetical protein
YP_001749826.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN3007 metabolite MFS transporter, MHS family
YP_001749827.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN2571 ring-cleaving dioxygenase
YP_001749828.1	PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_2459 alpha/beta hydrolase fold
YP_001749829.1	PFAM: leucine-rich repeat protein; KEGG: pen:PSEEN3009 hypothetical protein
YP_001749830.1	PFAM: UvrD/REP helicase; KEGG: pen:PSEEN3010 helicase; UvrD/REP family
YP_001749831.1	PFAM: Pirin domain protein; KEGG: pen:PSEEN3011 hypothetical protein
YP_001749832.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_001749833.1	PFAM: DEAD_2 domain protein; SMART: Helicase-like, DEXD box c2 type; helicase c2; KEGG: pen:PSEEN2644 hypothetical protein
YP_001749834.1	PFAM: VRR-NUC domain protein; KEGG: pen:PSEEN2643 hypothetical protein
YP_001749835.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bpt:Bpet0382 probable acetyltransferase
YP_001749836.1	PFAM: regulatory protein GntR HTH; KEGG: pfl:PFL_5228 transcriptional regulator, GntR family
YP_001749837.1	KEGG: pen:PSEEN2632 hypothetical protein
YP_001749838.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN2630 quinone oxidoreductase
YP_001749839.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2629 transcriptional regulator, LysR family
YP_001749840.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pfo:Pfl_2732 pyruvate decarboxylase
YP_001749841.1	KEGG: pen:PSEEN2686 hypothetical protein
YP_001749842.1	PFAM: Phosphoglycerate mutase; KEGG: pen:PSEEN2687 hypothetical protein
YP_001749843.1	KEGG: pfo:Pfl_4872 lipoprotein, putative
YP_001749844.1	KEGG: pmy:Pmen_2474 phosphoesterase, PA-phosphatase related
YP_001749845.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_3091 response regulator receiver:transcriptional regulatory protein, C-terminal
YP_001749846.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: pst:PSPTO_5584 hypothetical protein
YP_001749847.1	KEGG: acb:A1S_1106 hypothetical protein
YP_001749848.1	KEGG: syf:Synpcc7942_1504 hypothetical protein
YP_001749849.1	SMART: extracellular solute-binding protein family 3; KEGG: pmy:Pmen_3255 extracellular solute-binding protein, family 3
YP_001749850.1	catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system
YP_001749851.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_01670 putative ATP-binding component of ABC transporter
YP_001749852.1	PFAM: inner-membrane translocator; KEGG: pau:PA14_01680 putative permease of ABC transporter
YP_001749853.1	PFAM: inner-membrane translocator; KEGG: psb:Psyr_0671 inner-membrane translocator
YP_001749854.1	PFAM: basic membrane lipoprotein; KEGG: psb:Psyr_0663 basic membrane lipoprotein
YP_001749855.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: psa:PST_3080 oxidoreductase, 2OG-Fe(II) oxygenase family
YP_001749856.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pfl:PFL_3535 peptidase, M20/M25/M40 family
YP_001749857.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfl:PFL_3534 proline/betaine transporter
YP_001749858.1	KEGG: bch:Bcen2424_4766 porin, gram-negative type
YP_001749859.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_5417 transcriptional regulator, LysR family
YP_001749860.1	PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: pen:PSEEN2739 photolyase
YP_001749861.1	KEGG: pfl:PFL_5334 hypothetical protein
YP_001749862.1	KEGG: pen:PSEEN2751 hypothetical protein
YP_001749863.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN2750 outer membrane ferric siderophore receptor
YP_001749864.1	PFAM: protein of unknown function DUF1543; KEGG: pfl:PFL_2512 hypothetical protein
YP_001749865.1	Inhibits transcription at high concentrations of nickel
YP_001749866.1	KEGG: bcs:BCAN_B0818 nickel ABC transporter, periplasmic nickel-binding protein; TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5
YP_001749867.1	with NikACDE is involved in nickel transport into the cell
YP_001749868.1	with NikABDE is involved in nickel transport into the cell
YP_001749869.1	with NikABCE is involved in nickel transport into the cell
YP_001749870.1	with NikABCD is involved with nickel transport into the cell
YP_001749871.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mag:amb1328 GGDEF domain
YP_001749872.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: pfl:PFL_2518 domain of unknown function (DUF404) family
YP_001749873.1	PFAM: protein of unknown function DUF403; KEGG: pfl:PFL_2519 hypothetical protein
YP_001749874.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: pfl:PFL_2520 transglutaminase-like superfamily domain protein
YP_001749875.1	KEGG: pae:PA1733 putative proteasome-type protease
YP_001749876.1	KEGG: pnu:Pnuc_0548 hypothetical protein
YP_001749878.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: pmy:Pmen_2228 chromate transporter, chromate ion transporter (CHR) family
YP_001749879.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2758 sensor histidine kinase
YP_001749880.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2757 DNA-binding response regulator
YP_001749881.1	KEGG: pen:PSEEN2756 hypothetical protein
YP_001749882.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN2755 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001749883.1	KEGG: pen:PSEEN2754 hypothetical protein
YP_001749884.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pen:PSEEN2753 long-chain-fatty-acid-CoA ligase
YP_001749885.1	KEGG: pen:PSEEN2752 hypothetical protein
YP_001749886.1	PFAM: Ion transport 2 domain protein; KEGG: pst:PSPTO_1665 hypothetical protein
YP_001749887.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pap:PSPA7_6272 hypothetical protein
YP_001749889.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: ajs:Ajs_2691 beta-lactamase domain protein
YP_001749890.1	PFAM: UspA domain protein; KEGG: pfo:Pfl_3340 universal stress protein family
YP_001749891.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl_3341 GCN5-related N-acetyltransferase
YP_001749892.1	PFAM: UspA domain protein; KEGG: pfo:Pfl_3347 UspA
YP_001749893.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfo:Pfl_3346 zinc-containing alcohol dehydrogenase superfamily
YP_001749895.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pst:PSPTO_1666 transcriptional regulator, Crp/Fnr family
YP_001749896.1	PFAM: UspA domain protein; KEGG: mes:Meso_2248 UspA
YP_001749897.1	PFAM: protein of unknown function RIO1; KEGG: pfl:PFL_0708 hypothetical protein
YP_001749898.1	PFAM: transmembrane pair domain protein; KEGG: eca:ECA0906 hypothetical protein
YP_001749899.1	KEGG: pfo:Pfl_1375 hypothetical protein
YP_001749900.1	KEGG: pfo:Pfl_1376 hypothetical protein
YP_001749901.1	KEGG: pen:PSEEN3318 lipoprotein
YP_001749902.1	KEGG: pfl:PFL_1562 lipoprotein, putative
YP_001749903.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2646 transcriptional regulator, LysR family
YP_001749904.1	KEGG: psa:PST_1693 hypothetical protein
YP_001749905.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: psb:Psyr_2176 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal
YP_001749906.1	PFAM: MmgE/PrpD family protein; KEGG: pfl:PFL_2649 MmgE/PrpD family protein, putative
YP_001749907.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: psa:PST_1697 putative CaiB/BaiF-family enzyme
YP_001749908.1	PFAM: HpcH/HpaI aldolase; KEGG: pfl:PFL_2651 citrate lyase, beta subunit
YP_001749909.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pfl:PFL_2658 C4-dicarboxylate-binding periplasmic protein
YP_001749910.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pfl:PFL_2659 C4-dicarboxylate transporter, putative
YP_001749911.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pfl:PFL_2660 C4-dicarboxylate transport protein
YP_001749912.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3046 transcriptional regulator, LysR family
YP_001749913.1	KEGG: pfl:PFL_5184 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001749914.1	catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.
YP_001749915.1	KEGG: psb:Psyr_0361 hypothetical protein
YP_001749916.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001749917.1	KEGG: pfo:Pfl_3745 hypothetical protein
YP_001749918.1	PFAM: Na+/H+ antiporter NhaA; KEGG: bpt:Bpet2421 Na(+)/H(+) antiporter 1
YP_001749919.1	KEGG: pen:PSEEN2489 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_001749920.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN3030 periplamic phosphate-binding protein
YP_001749921.1	PFAM: Integral membrane protein TerC; KEGG: pen:PSEEN3035 hypothetical protein
YP_001749922.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN3343 acyl-CoA dehydrogenase
YP_001749923.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3344 transcriptional regulator, LysR family
YP_001749924.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pen:PSEEN3349 cysteine desulfurase
YP_001749925.1	catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive
YP_001749926.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2306 transcriptional regulator, LysR family
YP_001749927.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN2304 transcriptional regulator, AraC family
YP_001749928.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2303 transporter, LysE family
YP_001749929.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2302 sugar exporter, MFS family
YP_001749930.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfl:PFL_1816 oxidoreductase, zinc-binding
YP_001749931.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pfo:Pfl_4119 transcriptional regulator, AraC family
YP_001749932.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN2158 transcriptional regulator, TetR family
YP_001749933.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: pen:PSEEN2157 NAD(P)H dehydrogenase (quinone)
YP_001749934.1	TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: pen:PSEEN2137 2'-5' RNA ligase
YP_001749935.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: pen:PSEEN2136 aspartyl/asparaginyl beta-hydroxylase
YP_001749936.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN2134 acetyltransferase, GNAT family
YP_001749937.1	YghU; B2989; one of eight putative glutathione transferase proteins from E. coli
YP_001749938.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001749939.1	KEGG: pap:PSPA7_4876 chemotactic transducer PctA
YP_001749940.1	KEGG: bbr:BB2376 pyrroline-5-carboxylate reductase
YP_001749941.1	KEGG: pmy:Pmen_0222 transcriptional regulator, LysR family
YP_001749942.1	PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: pap:PSPA7_2621 ProQ activator of osmoprotectant transporter ProP
YP_001749943.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: dac:Daci_1890 transcriptional regulator, GntR family with aminotransferase domain
YP_001749944.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: nmu:Nmul_A2052 protein of unknown function DUF6
YP_001749946.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: smd:Smed_0840 antibiotic biosynthesis monooxygenase
YP_001749947.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: pst:PSPTO_2866 cupin family protein
YP_001749948.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: pst:PSPTO_2865 4-carboxymuconolactone decarboxylase, putative
YP_001749949.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_2864 transcriptional regulator, LysR family
YP_001749950.1	KEGG: pen:PSEEN3890 hypothetical protein
YP_001749951.1	catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide
YP_001749952.1	PFAM: carbonic anhydrase; KEGG: pen:PSEEN3600 carbonic anhydrase
YP_001749953.1	controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source
YP_001749954.1	PFAM: protein of unknown function DUF1348; KEGG: pfl:PFL_3262 hypothetical protein
YP_001749955.1	PFAM: protein of unknown function DUF1348; KEGG: pfl:PFL_3262 hypothetical protein
YP_001749956.1	PFAM: regulatory protein TetR; KEGG: xcv:XCV4432 putative transcriptional regulator, TetR family
YP_001749957.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pen:PSEEN5387 lipase
YP_001749958.1	KEGG: psb:Psyr_0096 transposase, IS4
YP_001749959.1	KEGG: psa:PST_0667 hypothetical protein
YP_001749960.1	KEGG: pen:PSEEN4574 hypothetical protein
YP_001749961.1	KEGG: pen:PSEEN1423 hypothetical protein
YP_001749962.1	PFAM: protein of unknown function UPF0157; KEGG: pap:PSPA7_0920 protein YqkA
YP_001749963.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bcn:Bcen_2902 alkylhydroperoxidase AhpD core
YP_001749964.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: sbl:Sbal_4073 (acyl-carrier-protein) phosphodiesterase
YP_001749965.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_3439 GCN5-related N-acetyltransferase
YP_001749966.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: eca:ECA2654 GntR-family transcriptional regulator
YP_001749967.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: eca:ECA2655 hypothetical protein
YP_001749968.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pau:PA14_51560 possible acetyltransferase
YP_001749969.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mgi:Mflv_5240 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001749970.1	PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6694 major facilitator superfamily MFS_1
YP_001749971.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pap:PSPA7_3072 probable aldehyde dehydrogenase
YP_001749972.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mmw:Mmwyl1_0863 transcriptional regulator, LysR family
YP_001749973.1	KEGG: acb:A1S_1794 hypothetical protein
YP_001749974.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aau:AAur_2426 putative major facilitator superfamily (MFS) transporter
YP_001749975.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_001749976.1	PFAM: regulatory protein MarR; KEGG: bja:bll1047 transcriptional regulatory protein
YP_001749977.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pna:Pnap_2724 ferredoxin
YP_001749978.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: dac:Daci_1355 Rieske (2Fe-2S) domain protein
YP_001749979.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfl:PFL_3480 major facilitator family transporter
YP_001749980.1	PFAM: outer membrane porin; KEGG: psb:Psyr_2730 outer membrane porin
YP_001749981.1	KEGG: pen:PSEEN4574 hypothetical protein
YP_001749982.1	KEGG: pen:PSEEN1423 hypothetical protein
YP_001749983.1	KEGG: fgr:FG02793.1 hypothetical protein
YP_001749984.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2371 transcriptional regulator, LysR family
YP_001749985.1	KEGG: rme:Rmet_4294 protein of unknown function DUF1486
YP_001749986.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfo:Pfl_2468 short-chain dehydrogenase/reductase SDR
YP_001749987.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: scl:sce7817 flavoprotein oxygenases, DIM6/NTAB family
YP_001749988.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL1967 putative AraC family transcriptional regulator
YP_001749989.1	KEGG: ade:Adeh_3207 hypothetical protein
YP_001749990.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psa:PST_2903 probable short-chain dehydrogenase
YP_001749991.1	PFAM: DoxX family protein; KEGG: pfl:PFL_2372 SURF4 domain protein
YP_001749992.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rme:Rmet_4293 alcohol dehydrogenase, zinc-binding
YP_001749993.1	KEGG: pfo:Pfl_3548 hypothetical protein
YP_001749994.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pae:PA2047 probable transcriptional regulator
YP_001749995.1	KEGG: pen:PSEEN2741 serine-pyruvate transaminase
YP_001749996.1	PFAM: SCP-like extracellular; KEGG: pfo:Pfl_2104 allergen V5/TPX-1-like
YP_001749997.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: pen:PSEEN2246 diguanylate cyclase (GGDEF domain)
YP_001749998.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mms:mma_1240 cytosine deaminase
YP_001749999.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: mms:mma_1239 xanthine permease (NSC2 family)
YP_001750000.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A2721 transcriptional regulator, LysR-family
YP_001750001.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: psa:PST_2526 YeeE/YedE family protein
YP_001750002.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: psa:PST_2527 YeeE/YedE family protein
YP_001750003.1	PFAM: beta-lactamase; KEGG: reu:Reut_B4421 6-aminohexanoate-dimer hydrolase
YP_001750004.1	PFAM: protein of unknown function DUF1302; KEGG: pmy:Pmen_1720 protein of unknown function DUF1302
YP_001750005.1	PFAM: thioesterase superfamily protein; KEGG: pfl:PFL_0291 thioesterase family protein domain protein
YP_001750006.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: psa:PST_0312 probable iron-containing alcohol dehydrogenase
YP_001750007.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pmy:Pmen_0380 acyl-CoA dehydrogenase domain protein
YP_001750008.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pfl:PFL_0290 3-hydroxyacyl-CoA dehydrogenase family protein
YP_001750009.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pmy:Pmen_0378 transcriptional regulator, LysR family
YP_001750010.1	PFAM: beta-lactamase domain protein; KEGG: pmy:Pmen_1715 beta-lactamase domain protein
YP_001750011.1	KEGG: pmy:Pmen_1717 hypothetical protein
YP_001750012.1	PFAM: protein of unknown function DUF202; KEGG: pmy:Pmen_1718 protein of unknown function DUF202
YP_001750013.1	PFAM: protein of unknown function DUF1329; KEGG: pmy:Pmen_1719 protein of unknown function DUF1329
YP_001750014.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pmy:Pmen_1721 transcriptional regulator, LysR family
YP_001750015.1	PFAM: major facilitator superfamily MFS_1; KEGG: pmy:Pmen_1722 major facilitator superfamily MFS_1
YP_001750016.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pmy:Pmen_1723 acyl-CoA dehydrogenase domain protein
YP_001750017.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pmy:Pmen_1724 AMP-dependent synthetase and ligase
YP_001750018.1	PFAM: extracellular solute-binding protein family 1; KEGG: pfo:Pfl_3511 extracellular solute-binding protein, family 1
YP_001750019.1	PFAM: outer membrane porin; KEGG: pap:PSPA7_1272 outer membrane porin OprE
YP_001750020.1	TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pfl:PFL_2499 citrate transporter
YP_001750021.1	PFAM: sodium:dicarboxylate symporter; KEGG: pap:PSPA7_1270 aerobic C4-dicarboxylate transport protein
YP_001750022.1	PFAM: protein of unknown function DUF453; KEGG: pap:PSPA7_1269 FldA protein
YP_001750023.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_1268 putative HTH-type transcriptional regulator YbhD
YP_001750024.1	PFAM: NLPA lipoprotein; KEGG: aav:Aave_1575 lipoprotein, YaeC family
YP_001750025.1	catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids
YP_001750026.1	PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_3762 general substrate transporter:major facilitator superfamily
YP_001750027.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eca:ECA0922 LysR-family transcriptional regulator
YP_001750028.1	PFAM: regulatory protein MerR; KEGG: psa:PST_1977 transcriptional regulator, MerR family
YP_001750029.1	KEGG: psa:PST_1970 sensory box protein, putative; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001750030.1	KEGG: pen:PSEEN2706 hypothetical protein
YP_001750031.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN2705 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001750032.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: pen:PSEEN2704 hypothetical protein
YP_001750033.1	PFAM: protein of unknown function DUF1365; KEGG: pen:PSEEN2703 hypothetical protein
YP_001750034.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2702 cyclopropane-fatty-acyl-phospholipid synthase
YP_001750035.1	KEGG: pen:PSEEN2701 hypothetical protein
YP_001750036.1	KEGG: pen:PSEEN2738 lipoprotein
YP_001750037.1	KEGG: pen:PSEEN2737 hypothetical protein
YP_001750038.1	PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO_2345 transporter, putative
YP_001750039.1	PFAM: Integral membrane protein TerC; KEGG: pen:PSEEN2161 hypothetical protein
YP_001750040.1	KEGG: pen:PSEEN2160 lipoprotein
YP_001750041.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2159 transcriptional activator, LysR family
YP_001750042.1	involved in the import of serine and threonine coupled with the import of sodium
YP_001750043.1	PFAM: protein of unknown function DUF480; KEGG: pen:PSEEN2299 hypothetical protein
YP_001750044.1	KEGG: pen:PSEEN2298 hypothetical protein
YP_001750045.1	TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN2297 alkyl hydroperoxide reductase subunit F
YP_001750046.1	TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN2296 alkyl hydroperoxide reductase, C22 subunit, thioredoxin-like (detoxification of hydroperoxides)
YP_001750047.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
YP_001750048.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pfl:PFL_3399 UTP-glucose-1-phosphate uridylyltransferase
YP_001750049.1	KEGG: pmy:Pmen_2354 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_001750050.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN2293 cytochrome c
YP_001750051.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN2292 cytochrome c
YP_001750052.1	KEGG: pen:PSEEN2290 hypothetical protein
YP_001750053.1	PFAM: Domain of unknown function DUF1883; KEGG: pen:PSEEN2289 hypothetical protein
YP_001750054.1	KEGG: pen:PSEEN2288 hypothetical protein
YP_001750055.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: pen:PSEEN2287 oxidoreductase, 2-nitropropane dioxygenase family
YP_001750056.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN2286 molybdate ABC transporter, periplasmic molybdate-binding protein
YP_001750057.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN2285 molybdate ABC transporter, permease protein
YP_001750058.1	KEGG: pen:PSEEN2284 molybdate ABC transporter, ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase
YP_001750059.1	KEGG: pen:PSEEN2283 DNA topoisomerase IB
YP_001750060.1	affects carbohydrate metabolism; has regulatory role in many processes
YP_001750061.1	PFAM: response regulator receiver; KEGG: pen:PSEEN2281 response regulator
YP_001750062.1	KEGG: pen:PSEEN2280 signal transduction protein; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase
YP_001750063.1	KEGG: pen:PSEEN2279 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001750064.1	PFAM: DoxX family protein; KEGG: pen:PSEEN2275 hypothetical protein
YP_001750065.1	KEGG: pen:PSEEN2274 hypothetical protein
YP_001750066.1	PFAM: Alginate lyase 2; KEGG: pap:PSPA7_2458 alginate lyase superfamily
YP_001750068.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2464 transcriptional regulator, LysR family
YP_001750069.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: kpn:KPN_02028 putative NADPH:quinone reductase and related Zn-dependent oxidoreductases
YP_001750070.1	SohB; periplasmic protein; member of the peptidase S49 family
YP_001750071.1	PFAM: Phosphoglycerate mutase; KEGG: pen:PSEEN2270 phosphoglycerate mutase family protein
YP_001750072.1	PFAM: Sterol-binding domain protein; KEGG: pfo:Pfl_3116 sterol-binding
YP_001750073.1	PFAM: aminoglycoside phosphotransferase; KEGG: pen:PSEEN2268 aminoglycoside aminotranferase
YP_001750074.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN2267 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001750075.1	KEGG: pen:PSEEN2264 hypothetical protein
YP_001750076.1	KEGG: pfo:Pfl_3509 hypothetical protein
YP_001750077.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ajs:Ajs_4122 diguanylate cyclase
YP_001750078.1	KEGG: pen:PSEEN2263 hypothetical protein
YP_001750079.1	PFAM: 17 kDa surface antigen; KEGG: pen:PSEEN2262 hypothetical protein
YP_001750080.1	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pen:PSEEN2261 transporter, sodium:sulfate symporter family
YP_001750081.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; KEGG: pen:PSEEN2260 diguanylate cyclase (GGDEF) domain
YP_001750082.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN2259 hypothetical protein
YP_001750083.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2258 transcriptional regulator, LysR family
YP_001750084.1	KEGG: pen:PSEEN2257 hypothetical protein
YP_001750085.1	KEGG: pen:PSEEN2255 hypothetical protein
YP_001750086.1	KEGG: pen:PSEEN2251 hypothetical protein
YP_001750087.1	Catalyzes the deamination of cytosine to uracil and ammonia
YP_001750088.1	PFAM: Class I peptide chain release factor; KEGG: pen:PSEEN2056 protein chain release factor B
YP_001750089.1	KEGG: psb:Psyr_2214 PAS; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001750090.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: azo:azo2612 GAF/GGDEF-domain containing protein
YP_001750091.1	PFAM: EAL domain protein; KEGG: ajs:Ajs_3442 diguanylate phosphodiesterase
YP_001750093.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfo:Pfl_3909 zinc-containing alcohol dehydrogenase superfamily
YP_001750094.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_3910 transcriptional regulator, LysR family
YP_001750095.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl_3555 transcriptional regulator, AraC family
YP_001750096.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: pfo:Pfl_3556 alkylhydroperoxidase AhpD core
YP_001750097.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: bpd:BURPS668_0480 glutaredoxin 3
YP_001750098.1	PFAM: OmpA/MotB domain protein; ImpA domain protein; KEGG: ses:SARI_02629 hypothetical protein
YP_001750099.1	TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: ypn:YPN_2490 hypothetical protein
YP_001750100.1	KEGG: ypi:YpsIP31758_2487 hypothetical protein
YP_001750101.1	TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: plu:plu3224 hypothetical protein
YP_001750102.1	TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: kpn:KPN_03179 hypothetical protein
YP_001750103.1	TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: yps:YPTB1499 hypothetical protein
YP_001750104.1	PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: ypn:YPN_2497 membrane protein
YP_001750105.1	KEGG: ypi:YpsIP31758_0794 hypothetical protein
YP_001750106.1	PFAM: PAAR repeat-containing protein; KEGG: ses:SARI_02623 hypothetical protein
YP_001750108.1	KEGG: pmy:Pmen_0108 glycoside hydrolase, family 19
YP_001750109.1	PFAM: PAAR repeat-containing protein; KEGG: ses:SARI_02623 hypothetical protein
YP_001750110.1	KEGG: pmy:Pmen_0108 glycoside hydrolase, family 19
YP_001750111.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: ypi:YpsIP31758_0733 type VI secretion system family protein
YP_001750112.1	KEGG: ypi:YpsIP31758_2505 ATPase, AAA family; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001750113.1	TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: ypi:YpsIP31758_2506 hypothetical protein
YP_001750114.1	PFAM: OmpA/MotB domain protein; KEGG: plu:plu3255 hypothetical protein
YP_001750115.1	KEGG: ecc:c3388 hypothetical protein
YP_001750116.1	TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: plu:plu4226 hypothetical protein
YP_001750117.1	TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: ypi:YpsIP31758_2510 hypothetical protein
YP_001750118.1	TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: ypp:YPDSF_1511 hypothetical protein
YP_001750119.1	PFAM: IstB domain protein ATP-binding protein; KEGG: pst:PSPTO_2842 ISPsy14, transposition helper protein
YP_001750120.1	KEGG: pen:PSEEN3022 hypothetical protein
YP_001750122.1	PFAM: major facilitator superfamily MFS_1; KEGG: pap:PSPA7_3647 probable MFS transporter
YP_001750123.1	PFAM: creatinase; peptidase M24; KEGG: pfl:PFL_5299 creatinase
YP_001750124.1	KEGG: bpl:BURPS1106A_A1931 transcriptional regulator, AraC family
YP_001750125.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: dsh:Dshi_2120 ABC transporter related
YP_001750126.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsh:Dshi_2121 binding-protein-dependent transport systems inner membrane component
YP_001750127.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_1022 binding-protein-dependent transport systems inner membrane component
YP_001750128.1	PFAM: extracellular solute-binding protein family 1; KEGG: pde:Pden_1021 spermidine/putrescine ABC transporter, periplasmic binding protein, putative
YP_001750129.1	PFAM: Creatininase; KEGG: pde:Pden_1019 creatininase
YP_001750130.1	TIGRFAM: GABA permease; PFAM: amino acid permease-associated region; KEGG: pae:PA0129 gamma-aminobutyrate permease
YP_001750131.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: csa:Csal_0987 transcriptional regulator, AraC family
YP_001750132.1	KEGG: bmn:BMA10247_A1832 putative purine catabolism transcriptional regulator
YP_001750133.1	KEGG: pst:PSPTO_1571 hypothetical protein
YP_001750134.1	PFAM: chemotaxis sensory transducer; KEGG: pfo:Pfl_0378 chemotaxis sensory transducer
YP_001750135.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: bbr:BB3874 high-affinity choline transport protein
YP_001750136.1	KEGG: pol:Bpro_3874 putative hemagglutinin-related protein
YP_001750137.1	KEGG: pen:PSEEN4363 porin, OprD family
YP_001750138.1	KEGG: pfo:Pfl_2992 hypothetical protein
YP_001750139.1	PFAM: Prophage CP4-57 regulatory; KEGG: pfo:Pfl_2993 phage transcriptional regulator, AlpA
YP_001750140.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pfo:Pfl_2994 cobyrinic acid a,c-diamide synthase
YP_001750141.1	KEGG: pfo:Pfl_2995 hypothetical protein
YP_001750142.1	KEGG: pfo:Pfl_2996 hypothetical protein
YP_001750143.1	KEGG: pfo:Pfl_2997 hypothetical protein
YP_001750144.1	PFAM: Domain of unknown function DUF1845; KEGG: pfo:Pfl_2998 hypothetical protein
YP_001750145.1	KEGG: pfo:Pfl_2999 hypothetical protein
YP_001750146.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
YP_001750148.1	PFAM: helix-turn-helix domain protein; KEGG: cvi:CV_1213 hypothetical protein
YP_001750149.1	KEGG: pfo:Pfl_3001 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein
YP_001750150.1	KEGG: pfo:Pfl_3003 hypothetical protein
YP_001750151.1	KEGG: pfo:Pfl_3004 hypothetical protein
YP_001750152.1	PFAM: DNA repair protein RadC; KEGG: pfo:Pfl_3005 DNA repair protein RadC
YP_001750153.1	KEGG: pfo:Pfl_3006 hypothetical protein
YP_001750154.1	KEGG: spe:Spro_0320 type IV B pilus protein
YP_001750155.1	KEGG: pfo:Pfl_3008 hypothetical protein
YP_001750156.1	KEGG: pfo:Pfl_3009 hypothetical protein
YP_001750157.1	PFAM: Lytic transglycosylase catalytic; KEGG: pfo:Pfl_3010 lytic transglycosylase, catalytic
YP_001750158.1	KEGG: pfo:Pfl_3011 hypothetical protein
YP_001750159.1	KEGG: pfo:Pfl_3012 hypothetical protein
YP_001750160.1	KEGG: pfo:Pfl_3013 hypothetical protein
YP_001750161.1	PFAM: cytochrome B561; KEGG: pfo:Pfl_3348 cytochrome b561
YP_001750162.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2758 sensor histidine kinase
YP_001750163.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2757 DNA-binding response regulator
YP_001750164.1	KEGG: pen:PSEEN2756 hypothetical protein
YP_001750165.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN2755 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001750166.1	PFAM: Haem oxygenase; KEGG: pen:PSEEN2754 hypothetical protein
YP_001750167.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pen:PSEEN2753 long-chain-fatty-acid-CoA ligase
YP_001750168.1	KEGG: pen:PSEEN2752 hypothetical protein
YP_001750169.1	PFAM: transposase mutator type; KEGG: psp:PSPPH_4836 ISPsy18, transposase
YP_001750171.1	PFAM: transposase IS4 family protein; KEGG: psa:PST_0668 ISPsy6, transposase
YP_001750172.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: azc:AZC_3049 transcriptional regulator
YP_001750173.1	PFAM: serine dehydratase alpha chain; KEGG: rba:RB8979 probable L-serine dehydratase, alpha chain
YP_001750174.1	PFAM: proline racemase; KEGG: bmu:Bmul_5268 proline racemase
YP_001750175.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sen:SACE_4846 putative benzoate transport protein (MFS family)
YP_001750176.1	PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: pfo:Pfl_3015 plasmid conserved hypothetical protein, RAQPRD
YP_001750177.1	KEGG: pfo:Pfl_3016 hypothetical protein
YP_001750178.1	KEGG: pfo:Pfl_3017 hypothetical protein
YP_001750179.1	KEGG: pfo:Pfl_3018 hypothetical protein
YP_001750180.1	KEGG: pfo:Pfl_3019 hypothetical protein
YP_001750181.1	KEGG: pfo:Pfl_3020 hypothetical protein
YP_001750182.1	KEGG: pfo:Pfl_3021 hypothetical protein
YP_001750183.1	KEGG: pfo:Pfl_3022 hypothetical protein
YP_001750184.1	KEGG: pfo:Pfl_3023 hypothetical protein
YP_001750185.1	PFAM: protein of unknown function DUF1527; KEGG: pfo:Pfl_3026 protein of unknown function DUF1527
YP_001750186.1	KEGG: pfo:Pfl_3027 hypothetical protein
YP_001750187.1	KEGG: pfo:Pfl_3028 hypothetical protein
YP_001750188.1	KEGG: pfo:Pfl_3029 hypothetical protein
YP_001750189.1	KEGG: ajs:Ajs_2227 hypothetical protein
YP_001750190.1	PFAM: domain of unknown function DUF1738; KEGG: pfo:Pfl_3033 probable DNA primase
YP_001750191.1	KEGG: pfl:PFL_4981 transcriptional regulator, putative
YP_001750193.1	PFAM: protein of unknown function DUF1528; Relaxase; KEGG: pfo:Pfl_3034 hypothetical protein
YP_001750194.1	KEGG: mbu:Mbur_1752 hypothetical protein
YP_001750195.1	PFAM: outer membrane porin; KEGG: pmy:Pmen_4306 outer membrane porin
YP_001750196.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rfr:Rfer_0998 short-chain dehydrogenase/reductase SDR
YP_001750197.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azo:azo1927 probable enoyl-CoA hydratase
YP_001750198.1	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rrs:RoseRS_2545 acetyl-CoA acetyltransferase
YP_001750199.1	PFAM: AMP-dependent synthetase and ligase; KEGG: dol:Dole_2557 AMP-dependent synthetase and ligase
YP_001750200.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rme:Rmet_2692 L-carnitine dehydratase/bile acid-inducible protein F
YP_001750201.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reh:H16_B0699 acyl-CoA dehydrogenase, long-chain specific
YP_001750202.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: aav:Aave_3969 transcriptional regulator, AraC family
YP_001750203.1	KEGG: pfo:Pfl_2753 short-chain dehydrogenase/reductase SDR
YP_001750204.1	KEGG: reh:H16_A1267 short chain dehydrogenase
YP_001750205.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C6814 transcriptional regulator, AraC family
YP_001750206.1	PFAM: nitroreductase; KEGG: rme:Rmet_1203 nitroreductase
YP_001750207.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cvi:CV_3816 probable acyl-CoA dehydrogenase
YP_001750208.1	PFAM: transposase IS4 family protein; KEGG: bpt:Bpet4179 ISPssy, transposase
YP_001750209.1	KEGG: pau:PA14_59190 hypothetical protein
YP_001750210.1	KEGG: tde:TDE1618 hypothetical protein
YP_001750211.1	KEGG: rsq:Rsph17025_4363 hypothetical protein
YP_001750212.1	KEGG: sdn:Sden_3576 hypothetical protein
YP_001750213.1	PFAM: Domain of unknown function DUF1863; KEGG: shm:Shewmr7_1038 hypothetical protein
YP_001750214.1	KEGG: mms:mma_2731 hypothetical protein
YP_001750215.1	KEGG: plu:plu4326 hypothetical protein
YP_001750216.1	KEGG: plu:plu4327 hypothetical protein
YP_001750217.1	KEGG: plu:plu4328 hypothetical protein
YP_001750218.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: pst:PSPTO_4520 methyltransferase domain protein
YP_001750219.1	KEGG: pst:PSPTO_4520 methyltransferase domain protein
YP_001750220.1	KEGG: pst:PSPTO_4522 hypothetical protein
YP_001750222.1	PFAM: Gp37Gp68 family protein; KEGG: sme:SMa2239 hypothetical protein
YP_001750223.1	KEGG: rpb:RPB_2716 hypothetical protein
YP_001750224.1	KEGG: par:Psyc_0869 possible AAA ATPase family protein
YP_001750225.1	PFAM: integrase family protein; KEGG: net:Neut_0006 phage integrase family protein
YP_001750226.1	KEGG: pen:PSEEN3448 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_001750227.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_001750228.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN3450 response regulator GacA (global antibiotic and cyanide control protein, LuxR/UhpA family)
YP_001750229.1	SMART: helix-turn-helix domain protein; KEGG: pen:PSEEN3451 transcriptional regulator, Cro/CI family
YP_001750230.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN3464 acetyltransferase, GNAT family
YP_001750231.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN3467 glutathione S-transferase
YP_001750232.1	KEGG: pen:PSEEN3472 hypothetical protein
YP_001750233.1	PFAM: Spore germination protein; amino acid permease-associated region; KEGG: pen:PSEEN3473 gamma-aminobutyrate permease
YP_001750234.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3474 transcriptional regulator, LysR family
YP_001750235.1	PFAM: aminotransferase class-III; KEGG: pen:PSEEN3475 4-aminobutyrate aminotransferase, PLP-dependent
YP_001750236.1	KEGG: pen:PSEEN3476 hypothetical protein
YP_001750237.1	KEGG: pen:PSEEN3477 hypothetical protein
YP_001750238.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001750239.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN3479 probable sulfate transproter, MFS family
YP_001750240.1	KEGG: pfo:Pfl_5228 hypothetical protein
YP_001750241.1	PFAM: NolW domain protein; KEGG: pen:PSEEN3480 type II secretion system protein D; signal peptide
YP_001750242.1	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: pen:PSEEN3481 isocitrate lyase
YP_001750243.1	TIGRFAM: oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: pst:PSPTO_0148 oligopeptide transporter, OPT family
YP_001750244.1	KEGG: pen:PSEEN4574 hypothetical protein
YP_001750245.1	KEGG: pen:PSEEN5266 hypothetical protein
YP_001750246.1	KEGG: pen:PSEEN4574 hypothetical protein
YP_001750247.1	KEGG: pen:PSEEN5266 hypothetical protein
YP_001750248.1	PFAM: protein of unknown function UPF0005; KEGG: pen:PSEEN2225 hypothetical protein
YP_001750249.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN2224 transporter, xanthine/uracil permease family
YP_001750250.1	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs
YP_001750251.1	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs
YP_001750252.1	TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: pen:PSEEN2221 hypothetical protein
YP_001750253.1	TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: pen:PSEEN2220 sulfite reductase, gamma subunit DsrC-like
YP_001750254.1	PFAM: glycosyl transferase family 3; KEGG: pen:PSEEN2219 phosphoribosyltransferase
YP_001750255.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN2218 hypothetical protein
YP_001750256.1	TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pen:PSEEN2217 siroheme synthase
YP_001750257.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001750258.1	KEGG: pen:PSEEN2215 CrcB protein
YP_001750259.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN2214 DNA-dependant ATPase
YP_001750260.1	participates with LolB in the incorporation of lipoprotein into the outer membrane
YP_001750261.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: pen:PSEEN2212 cell division protein FtsK
YP_001750262.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_001750263.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_001750264.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_001750265.1	KEGG: pen:PSEEN2207 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001750266.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_001750267.1	KEGG: pen:PSEEN2205 cold-shock protein CspD; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_001750268.1	TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: pen:PSEEN2204 isocitrate dehydrogenase
YP_001750269.1	KEGG: pen:PSEEN2202 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type
YP_001750270.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN2201 hydrolase, NUDIX family
YP_001750271.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_001750272.1	HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis
YP_001750273.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_001750274.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: pen:PSEEN2197 hypothetical protein
YP_001750275.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN2196 acetyl transferase, GNAT family
YP_001750276.1	decatenates replicating daughter chromosomes
YP_001750277.1	PFAM: DinB family protein; KEGG: pen:PSEEN3505 hypothetical protein
YP_001750278.1	PFAM: AFG1-family ATPase; KEGG: pen:PSEEN3506 AFG1-like ATPase
YP_001750279.1	PFAM: glucose sorbosone dehydrogenase; KEGG: pen:PSEEN3507 glucose/sorbosone dehydrogenase
YP_001750280.1	KEGG: pen:PSEEN3508 hypothetical protein
YP_001750281.1	SMART: Water Stress and Hypersensitive response domain protein; KEGG: pen:PSEEN3512 lipoprotein
YP_001750282.1	KEGG: pen:PSEEN3514 hypothetical protein
YP_001750283.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN3515 hypothetical protein
YP_001750284.1	PFAM: tRNA--hydroxylase; KEGG: pen:PSEEN3516 hypothetical protein
YP_001750285.1	PFAM: UspA domain protein; KEGG: pae:PA1789 hypothetical protein
YP_001750286.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3524 transporter, EamA family
YP_001750287.1	KEGG: pen:PSEEN3527 lipoprotein
YP_001750288.1	PFAM: creatinase; peptidase M24; KEGG: pen:PSEEN3528 peptidase, M24 family protein
YP_001750289.1	KEGG: pmy:Pmen_2290 hypothetical protein
YP_001750290.1	KEGG: pmy:Pmen_2291 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein
YP_001750291.1	TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN3530 transcriptional activator for superoxide response; Fe-S center for redox-sensing (MerR family)
YP_001750292.1	PFAM: isochorismatase hydrolase; KEGG: pfo:Pfl_5042 isochorismatase hydrolase
YP_001750293.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN3531 transcriptional regulator, Cro/CI family
YP_001750294.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3532 hypothetical protein
YP_001750295.1	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
YP_001750296.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_001750297.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
YP_001750298.1	subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_001750299.1	subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_001750300.1	subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_001750301.1	KEGG: pen:PSEEN3539 hypothetical protein
YP_001750302.1	KEGG: pen:PSEEN3540 hypothetical protein
YP_001750303.1	KEGG: pen:PSEEN3541 hypothetical protein
YP_001750304.1	PFAM: zinc finger DksA/TraR C4-type; KEGG: pen:PSEEN3543 RNA polymerase-binding protein DksA
YP_001750305.1	KEGG: pen:PSEEN3544 hypothetical protein
YP_001750306.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pen:PSEEN3545 enoyl-CoA hydratase, FadB1x
YP_001750307.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN3546 acyl-CoA dehydrogenase protein FadFx
YP_001750308.1	KEGG: pen:PSEEN3547 acetyl-CoA acetyltransferase with thiolase domain FadAx; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein
YP_001750309.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN3548 3-hydroxyacyl-CoA dehydrogenase FadB2x
YP_001750310.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pen:PSEEN3549 acetyl-coA synthetase/AMP-(fatty) acid ligase FadDx
YP_001750311.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3551 transcriptional regulator, AraC family
YP_001750312.1	TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3552 transcriptional regulator, LysR family
YP_001750313.1	catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate
YP_001750314.1	catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate
YP_001750315.1	PFAM: NADPH-dependent FMN reductase; KEGG: pen:PSEEN3555 oxidoreductase, flavoprotein
YP_001750316.1	KEGG: pen:PSEEN3556 hypothetical protein
YP_001750317.1	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: pen:PSEEN3557 arginine/lysine/ornithine decarboxylase
YP_001750318.1	3'-5' exonuclease of DNA polymerase III
YP_001750319.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_001750320.1	KEGG: pen:PSEEN3560 hypothetical protein
YP_001750321.1	KEGG: pen:PSEEN3561 hydroxyacylglutathione hydrolase GloB; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein
YP_001750322.1	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: pen:PSEEN3562 membrane-bound lytic murein transglycosylase D MltD
YP_001750323.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN3564 ABC transporter, periplamic binding protein
YP_001750324.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN3565 ABC transporter, periplamic binding protein
YP_001750325.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3566 ABC transporter, permease protein
YP_001750326.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3567 ABC transporter, permease protein
YP_001750327.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3568 ABC transporter, ATP-binding protein
YP_001750328.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pfl:PFL_2291 RNA polymerase sigma factor FecI
YP_001750329.1	with FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon
YP_001750330.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_2293 outer membrane ferripyoverdine receptor
YP_001750331.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_1254 general substrate transporter
YP_001750332.1	KEGG: psp:PSPPH_0906 sensory box protein/methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001750333.1	PFAM: EAL domain protein; GAF domain protein; KEGG: psp:PSPPH_4247 GAF domain/GGDEF domain/EAL domain protein
YP_001750334.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3605 transcriptional regulator of kdp operon
YP_001750335.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: pen:PSEEN3606 two-component sensor KdpD sensory kinase
YP_001750336.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex
YP_001750337.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_001750338.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_001750339.1	PFAM: protein of unknown function UPF0118; KEGG: pen:PSEEN3611 hypothetical protein
YP_001750340.1	KEGG: pen:PSEEN3612 hypothetical protein
YP_001750341.1	PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: pen:PSEEN3613 hydrolase, alpha/beta fold family
YP_001750342.1	KEGG: pen:PSEEN3614 hydrolase, alpha/beta fold family
YP_001750343.1	TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: pen:PSEEN3616 phosphohistidine phosphatase SixA
YP_001750344.1	KEGG: pen:PSEEN3617 hypothetical protein
YP_001750345.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_001750346.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN3619 TonB-dependent receptor
YP_001750347.1	KEGG: pen:PSEEN3620 hypothetical protein
YP_001750348.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3621 sensor histidine kinase/response regulator (hybrid)
YP_001750349.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_001750350.1	FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001750351.1	PFAM: amidohydrolase 2; KEGG: pen:PSEEN3625 amidohydrolase
YP_001750352.1	PFAM: Pirin domain protein; KEGG: pen:PSEEN3626 hypothetical protein
YP_001750353.1	PFAM: dienelactone hydrolase; KEGG: pen:PSEEN3627 dienelactone hydrolase
YP_001750354.1	molecular chaperone
YP_001750355.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN3629 hypothetical protein
YP_001750356.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN3630 hypothetical protein
YP_001750357.1	KEGG: pen:PSEEN3631 lipoprotein
YP_001750358.1	PFAM: protein of unknown function DUF599; KEGG: pen:PSEEN3632 hypothetical protein
YP_001750359.1	PFAM: branched-chain amino acid transport system II carrier protein; KEGG: pen:PSEEN3633 branched chain amino acid transporter
YP_001750360.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_001750361.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_001750362.1	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001750363.1	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA
YP_001750364.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_001750365.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_001750366.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_001750367.1	TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: pen:PSEEN3643 succinate dehydrogenase, hydrophobic membrane anchor protein
YP_001750368.1	TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: pen:PSEEN3644 succinate dehydrogenase, cytochrome b556 subunit
YP_001750369.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
YP_001750370.1	PFAM: lipid-binding START domain protein; KEGG: pen:PSEEN3647 hypothetical protein
YP_001750371.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN3648 hypothetical protein
YP_001750372.1	KEGG: pen:PSEEN3649 hypothetical protein
YP_001750373.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN3650 transcriptional regulator, GntR family
YP_001750374.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN3654 outer membrane protein; OmpA family
YP_001750375.1	KEGG: pen:PSEEN3655 lipoprotein
YP_001750376.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN3656 hypothetical protein
YP_001750377.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: pen:PSEEN3657 electron transfer flavoprotein alpha-subunit
YP_001750378.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: pen:PSEEN3658 electron transfer flavoprotein beta-subunit
YP_001750379.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: pen:PSEEN3660 electron transfer flavoprotein-ubiquinone oxidoreductase
YP_001750380.1	SMART: helix-turn-helix domain protein; KEGG: bmu:Bmul_4193 transcriptional regulator, XRE family
YP_001750381.1	KEGG: bbr:BB1411 hypothetical protein
YP_001750382.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN3661 permease, MFS superfamily
YP_001750383.1	KEGG: pen:PSEEN3662 hypothetical protein
YP_001750384.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas aeruginosa this extracytoplasmic function sigma factor may be involved in the transcription of the ferric pyoverdine receptor gene, fpvA.
YP_001750385.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN3664 RND efflux membrane fusion protein
YP_001750386.1	PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: pen:PSEEN3665 efflux ABC transporter, ATP-binding/permease protein
YP_001750387.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN3666 multidrug efflux outer membrane protein, RND family
YP_001750388.1	KEGG: pfo:Pfl_1854 twin-arginine translocation pathway signal
YP_001750389.1	PFAM: peptidase M19 renal dipeptidase; KEGG: pen:PSEEN3220 membrane dipeptidase
YP_001750390.1	PFAM: aminotransferase class V; KEGG: pen:PSEEN3221 aminotransferase, class V
YP_001750391.1	PFAM: protein of unknown function DUF323; KEGG: pen:PSEEN3222 hypothetical protein
YP_001750392.1	KEGG: pfo:Pfl_1850 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001750393.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: pap:PSPA7_2859 linear gramicidin synthetase subunit D
YP_001750394.1	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: pen:PSEEN3229 pyoverdine sidechain peptide synthetase
YP_001750395.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pen:PSEEN3228 lipase
YP_001750396.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: nwi:Nwi_1732 TonB-dependent siderophore receptor
YP_001750397.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: pfo:Pfl_1847 amino acid adenylation
YP_001750398.1	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Taurine catabolism dioxygenase TauD/TfdA; phosphopantetheine-binding; KEGG: pfo:Pfl_1846 peptide synthase
YP_001750399.1	SMART: transcription factor jumonji jmjC domain protein; KEGG: pfo:Pfl_1843 transcription factor jumonji, JmjC
YP_001750400.1	catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde
YP_001750401.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3670 sensor histidine kinase ArmS
YP_001750402.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3671 DNA-binding response regulator
YP_001750403.1	KEGG: psb:Psyr_0686 hypothetical protein
YP_001750404.1	PFAM: GAD-like domain protein; Domain of unknown function DUF1851; KEGG: psb:Psyr_0687 hypothetical protein
YP_001750405.1	PFAM: GAD-like domain protein; Domain of unknown function DUF1851; KEGG: psb:Psyr_0687 hypothetical protein
YP_001750406.1	KEGG: pen:PSEEN2871 hypothetical protein
YP_001750407.1	PFAM: protein of unknown function DUF182; KEGG: pau:PA14_61120 putative xanthine dehydrogenase accessory factor X
YP_001750408.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN2873 cytochrome c
YP_001750409.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pen:PSEEN2874 oxidase, small subunit
YP_001750410.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pen:PSEEN2875 oxidase, large subunit
YP_001750411.1	PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: pen:PSEEN1818 thiol:disulfide interchange protein DsbD
YP_001750412.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN1817 thiol:disulfide interchange protein DsbE
YP_001750413.1	catalyzes the specific recognition and activation of amino acids during peptide synthesis; involved in the biosynthesis of the peptide chain of pyoverdines
YP_001750414.1	RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease
YP_001750415.1	KEGG: pen:PSEEN1813 siderophore biosynthesis protein
YP_001750416.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN1812 periplasmic binding protein
YP_001750417.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: pen:PSEEN1811 exonuclease
YP_001750418.1	PFAM: protein of unknown function DUF1255; KEGG: pen:PSEEN1810 hypothetical protein
YP_001750419.1	KEGG: pen:PSEEN1809 hypothetical protein
YP_001750420.1	CcoN; FixN
YP_001750421.1	CcoO; FixO
YP_001750422.1	KEGG: pen:PSEEN1805 cytochrome c oxidase, cbb3-type, CcoQ subunit
YP_001750423.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: pen:PSEEN1804 cytochrome c oxidase, cbb3-type, subunit III
YP_001750424.1	CcoN; FixN
YP_001750425.1	CcoO; FixO
YP_001750426.1	PFAM: Cbb3-type cytochrome oxidase component; KEGG: pen:PSEEN1800 cytochrome c oxidase, cbb3-type, CcoQ subunit
YP_001750427.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: pen:PSEEN1799 cytochrome c oxidase, cbb3-type, subunit III
YP_001750428.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pen:PSEEN1798 oxidase with iron-sulfur cluster
YP_001750429.1	KEGG: pen:PSEEN1797 hypothetical protein
YP_001750430.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: pen:PSEEN1796 copper-transporting P-type ATPase CcoI
YP_001750431.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: pen:PSEEN1795 cytochrome oxidase maturation protein, cbb3-type CcoS
YP_001750432.1	KEGG: pen:PSEEN1794 hypothetical protein
YP_001750433.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001750434.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pen:PSEEN1792 transcriptional regulator Anr
YP_001750435.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_001750436.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_001750437.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN1789 hypothetical protein
YP_001750438.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
YP_001750439.1	KEGG: pen:PSEEN1786 hypothetical protein
YP_001750440.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN1785 transcriptional regulator
YP_001750441.1	PFAM: integrase family protein; KEGG: pen:PSEEN1782 integrase
YP_001750442.1	PFAM: phage antirepressor protein; KilA domain protein; KEGG: bvi:Bcep1808_4553 KilA, N-terminal domain protein
YP_001750444.1	PFAM: helix-turn-helix domain protein; KEGG: eci:UTI89_C0292 putative transcription regulator
YP_001750446.1	PFAM: Resolvase domain; KEGG: pau:PA14_22080 possible resolvase
YP_001750448.1	KEGG: kpn:KPN_01427 hypothetical protein
YP_001750449.1	KEGG: csa:Csal_1202 RNA-directed DNA polymerase (reverse transcriptase)
YP_001750451.1	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB
YP_001750452.1	interacts directly with the cell division protein ftsZ; probable receptor for the septal ring structure, may anchor it to the inner-membrane
YP_001750453.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: pen:PSEEN1767 chromosome segregation SMC protein
YP_001750454.1	PFAM: regulatory protein GntR HTH; KEGG: pen:PSEEN1766 transcriptional regulator (GntR-family)
YP_001750455.1	TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: pen:PSEEN1765 xanthine dehydrogenase, small subunit XhdA
YP_001750456.1	KEGG: pen:PSEEN1764 xanthine dehydrogenase, large subunit XhdB; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_001750457.1	TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: pen:PSEEN1763 xanthine dehydrogenase accessory factor XdhC
YP_001750458.1	Catalyzes the deamination of guanine
YP_001750459.1	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure
YP_001750460.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1760 transcriptional regulator, GntR family
YP_001750461.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN1759 transporter
YP_001750462.1	TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: pen:PSEEN1686 transthyretin
YP_001750463.1	KEGG: pen:PSEEN1685 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase
YP_001750464.1	KEGG: pen:PSEEN1684 hypothetical protein
YP_001750465.1	catalyzes the formation of glyoxylate from (S)-ureidoglycolate
YP_001750466.1	PFAM: protein of unknown function DUF989; KEGG: pen:PSEEN1682 hypothetical protein
YP_001750467.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN1681 xanthine/uracil permease
YP_001750468.1	KEGG: pen:PSEEN1680 hypothetical protein
YP_001750469.1	KEGG: pen:PSEEN1679 hypothetical protein
YP_001750470.1	PFAM: protein of unknown function DUF808; KEGG: pen:PSEEN1676 hypothetical protein
YP_001750471.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: pen:PSEEN1675 transcriptional regulator, TetR family
YP_001750472.1	PFAM: protein of unknown function DUF336; KEGG: pen:PSEEN1674 hypothetical protein
YP_001750473.1	catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate
YP_001750474.1	KEGG: pen:PSEEN1671 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel
YP_001750475.1	KEGG: pen:PSEEN1670 tartronic semialdehyde reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding
YP_001750476.1	PFAM: MOFRL domain protein; KEGG: pen:PSEEN1669 hydroxypyruvate reductase
YP_001750477.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001750478.1	PFAM: Urea transporter; KEGG: pen:PSEEN1667 transporter
YP_001750479.1	KEGG: psp:PSPPH_1154 YD repeat protein
YP_001750480.1	KEGG: pen:PSEEN1667 transporter
YP_001750481.1	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: pen:PSEEN1666 cation transporter, VIC family
YP_001750482.1	SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN3358 hypothetical protein
YP_001750483.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN1665 periplasmic thiosulfate-binding protein
YP_001750484.1	KEGG: pen:PSEEN1664 hypothetical protein
YP_001750485.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN1663 hypothetical protein
YP_001750486.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN1662 transcriptional regulator, AsnC family
YP_001750487.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN1660 transporter, NCS1 nucleoside transporter family
YP_001750488.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: pen:PSEEN1659 hydantoin racemase
YP_001750489.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN1658 D-amino acid dehydrogenase, small subunit
YP_001750490.1	KEGG: pen:PSEEN1657 hypothetical protein
YP_001750491.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN1656 FKBP-type peptidyl-prolyl cis-trans isomerase
YP_001750492.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pen:PSEEN1655 hypothetical protein
YP_001750493.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pen:PSEEN3771 phenazine biosynthesis protein, PhzC/F family
YP_001750494.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pen:PSEEN3772 D-isomer specific 2-hydroxyacid dehydrogenase
YP_001750495.1	KEGG: pen:PSEEN3773 hypothetical protein
YP_001750496.1	KEGG: pen:PSEEN3774 cytochrome c-type biogenesis protein CycH; TIGRFAM: cytochrome c-type biogenesis protein CcmI; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001750497.1	PFAM: cytochrome C biogenesis protein; KEGG: pen:PSEEN3775 cytochrome c-type biogenesis protein CycL
YP_001750498.1	TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN3776 thiol:disulfide interchange protein DsbE
YP_001750499.1	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: pen:PSEEN3777 periplasmic cytochrome c-type biogenesis protein CcmF
YP_001750500.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
YP_001750501.1	TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); KEGG: pfo:Pfl_2958 heme exporter protein D
YP_001750502.1	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: pen:PSEEN3780 cytochrome c-type biogenesis protein CcmC; heme ABC export system, permease protein
YP_001750503.1	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: pen:PSEEN3781 heme ABC export system, permease protein CcmB
YP_001750504.1	ATP-binding protein; required for proper cytochrome c maturation
YP_001750505.1	KEGG: pen:PSEEN3783 hypothetical protein
YP_001750506.1	KEGG: pen:PSEEN3784 hypothetical protein
YP_001750507.1	KEGG: pen:PSEEN3785 hypothetical protein
YP_001750508.1	KEGG: pen:PSEEN3786 hypothetical protein
YP_001750509.1	PFAM: CheW domain protein; KEGG: pen:PSEEN3787 purine-binding chemotaxis protein CheW
YP_001750510.1	PFAM: CheW domain protein; KEGG: pen:PSEEN3788 hypothetical protein
YP_001750511.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN3789 ATPase, ParA family protein
YP_001750512.1	Homologous to MotB. These organism have both MotB and MotD. With MotC (a MotA homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. Either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility
YP_001750513.1	homologous to MotA; this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; these organisms have both MotA and MotC
YP_001750514.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_001750515.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: pen:PSEEN3793 chemotaxis histidine kinase CheA
YP_001750516.1	PFAM: Chemotaxis phosphatase CheZ; KEGG: pen:PSEEN3794 chemotactic response, CheY protein phophatase
YP_001750517.1	PFAM: response regulator receiver; KEGG: pen:PSEEN3795 chemotaxis protein CheY
YP_001750518.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes
YP_001750519.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN3797 flagellar number regulator FleN
YP_001750520.1	positive regulator of class III flagellar genes
YP_001750521.1	membrane protein involved in the flagellar export apparatus
YP_001750522.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mlr7144 transcriptional regulator
YP_001750523.1	KEGG: spe:Spro_1367 D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein
YP_001750524.1	KEGG: ret:RHE_PD00205 hypothetical protein
YP_001750525.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: aba:Acid345_1980 cystathionine beta-lyase
YP_001750526.1	KEGG: rso:RS04684 hypothetical protein
YP_001750527.1	PFAM: aminotransferase class V; KEGG: plu:plu3103 hypothetical protein
YP_001750528.1	PFAM: D-alanine--D-alanine ligase domain protein; KEGG: cbf:CLI_0538 D-alanine--D-alanine ligase
YP_001750529.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_001750530.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_001750531.1	with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus
YP_001750532.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_001750533.1	PFAM: flagellar biosynthesis protein FliO; KEGG: pen:PSEEN3804 flagellar assembly protein FliO
YP_001750534.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001750535.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation
YP_001750536.1	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_001750537.1	PFAM: flagellar hook-length control protein; KEGG: pen:PSEEN3808 flagellar hook-length control protein FliK
YP_001750538.1	PFAM: Hpt domain protein; KEGG: pen:PSEEN3809 hypothetical protein
YP_001750539.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: pen:PSEEN3810 sensor histidine kinase/response regulator (hybrid)
YP_001750540.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pen:PSEEN3811 anti-sigma F factor antagonist
YP_001750541.1	rod/hook and filament chaperone
YP_001750542.1	involved in type III protein export during flagellum assembly
YP_001750543.1	binds to and inhibits the function of flagella specific ATPase FliI
YP_001750544.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001750545.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_001750546.1	forms a junction between the M-ring and FlgB during flagella biosynthesis
YP_001750547.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: pen:PSEEN3818 response regulator FleR
YP_001750548.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: pen:PSEEN3819 sensory box histidine kinase FleS
YP_001750549.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; flagellar regulatory FleQ domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN3820 transcriptional regulator FleQ
YP_001750550.1	KEGG: pen:PSEEN3822 flagellar protein, FliT
YP_001750551.1	flagellin specific chaperone
YP_001750552.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: pfl:PFL_1631 flagellar hook-associated protein 2
YP_001750553.1	PFAM: flagellar protein FlaG protein; KEGG: pfl:PFL_1630 flagellin FlaG
YP_001750554.1	structural flagella protein
YP_001750555.1	KEGG: pfo:Pfl_1526 hypothetical protein
YP_001750556.1	KEGG: pfo:Pfl_1525 hypothetical protein
YP_001750557.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: pfl:PFL_1626 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_001750558.1	PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: pfo:Pfl_1523 NeuB
YP_001750559.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_1624 FlaR protein (FlaR)
YP_001750560.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: pfl:PFL_1623 acylneuraminate cytidylyltransferase, putative
YP_001750561.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pfo:Pfl_1519 DegT/DnrJ/EryC1/StrS aminotransferase
YP_001750562.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: pfo:Pfl_1518 NAD-dependent epimerase/dehydratase
YP_001750563.1	PFAM: glycosyl transferase family 2; KEGG: pfo:Pfl_1517 glycosyl transferase, family 2
YP_001750564.1	PFAM: Cephalosporin hydroxylase; KEGG: pfo:Pfl_1516 cephalosporin hydroxylase
YP_001750565.1	PFAM: Methyltransferase type 11; KEGG: sat:SYN_02653 methyltransferase
YP_001750566.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: dol:Dole_1963 NAD-dependent epimerase/dehydratase
YP_001750567.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: pfo:Pfl_1513 hypothetical protein
YP_001750568.1	PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: pfo:Pfl_1512 dTDP-4-dehydrorhamnose 3,5-epimerase
YP_001750569.1	TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: pfo:Pfl_1511 NAD-dependent epimerase/dehydratase
YP_001750570.1	TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pfo:Pfl_1510 nucleotidyl transferase
YP_001750571.1	PFAM: glycosyl transferase family 2; KEGG: pfo:Pfl_1508 glycosyl transferase, family 2
YP_001750572.1	With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook
YP_001750573.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
YP_001750574.1	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space
YP_001750575.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_001750576.1	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod
YP_001750577.1	makes up the distal portion of the flagellar basal body rod
YP_001750578.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod
YP_001750579.1	KEGG: pen:PSEEN3838 hypothetical protein
YP_001750580.1	the hook connects flagellar basal body to the flagellar filament
YP_001750581.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production
YP_001750582.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_001750583.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella
YP_001750584.1	PFAM: MCP methyltransferase CheR-type; KEGG: pen:PSEEN3844 chemotaxis protein methyltransferase CheR
YP_001750585.1	PFAM: response regulator receiver; CheW domain protein; KEGG: pen:PSEEN3845 chemotaxis protein CheV
YP_001750586.1	required for the assembly of the flagellar basal body P-ring
YP_001750587.1	PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: pen:PSEEN3847 negative regulator of flagellin synthesis FlgM
YP_001750588.1	PFAM: FlgN family protein; KEGG: pen:PSEEN3848 flagella synthesis protein FlgN
YP_001750589.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN3849 hypothetical protein
YP_001750590.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3850 major facilitator family transporter
YP_001750591.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN3851 glutamine synthetase
YP_001750592.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN3852 transcriptional regulator BkdR
YP_001750593.1	PFAM: dehydrogenase E1 component; KEGG: pen:PSEEN3853 2-oxoisovalerate dehydrogenase, alpha subunit
YP_001750594.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: pen:PSEEN3854 2-oxoisovalerate dehydrogenase, beta subunit
YP_001750595.1	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: pen:PSEEN3855 2-oxoisovalerate dehydrogenase, lipoamide acyltransferase component
YP_001750596.1	E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001750597.1	KEGG: nca:Noca_4223 dTDP-6-deoxy-L-hexose 3-O-methyltransferase
YP_001750598.1	KEGG: fal:FRAAL6244 hypothetical protein
YP_001750600.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: fjo:Fjoh_0320 acyl-(acyl carrier protein)-like protein
YP_001750601.1	KEGG: bte:BTH_I3215 hypothetical protein
YP_001750602.1	KEGG: saq:Sare_2046 conserved hypothetical protein
YP_001750603.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: rme:Rmet_5239 phytanoyl-CoA dioxygenase
YP_001750604.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rme:Rmet_5240 methyltransferase type 12
YP_001750605.1	PFAM: WbqC-like family protein; KEGG: bte:BTH_I3212 WbnG
YP_001750606.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bxe:Bxe_A0099 putative transferase
YP_001750607.1	PFAM: glycosyl transferase family 2; KEGG: xac:XAC1957 O-antigen biosynthesis protein
YP_001750608.1	PFAM: Endonuclease I; KEGG: net:Neut_2614 deoxyribonuclease I
YP_001750609.1	TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: pen:PSEEN3864 ATP-binding protein PhnN
YP_001750610.1	PFAM: Arc domain protein DNA binding domain protein; KEGG: pen:PSEEN3868 alginate biosynthesis transcriptional activator
YP_001750611.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: pen:PSEEN3870 magnesium transporter
YP_001750612.1	affects carbohydrate metabolism; has regulatory role in many processes
YP_001750613.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
YP_001750614.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001750615.1	catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism
YP_001750616.1	KEGG: pen:PSEEN3877 hypothetical protein
YP_001750617.1	catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation
YP_001750618.1	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH
YP_001750619.1	KEGG: pen:PSEEN3880 arginine succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit
YP_001750620.1	KEGG: pen:PSEEN3881 arginine succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine/ornithine succinyltransferase, alpha subunit; PFAM: arginine N-succinyltransferase beta subunit
YP_001750621.1	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate
YP_001750622.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3883 transcriptional regulator ArgR, AraC family
YP_001750623.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3884 arginine/ornithine transport ATP-binding protein AotP
YP_001750624.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3885 arginine/ornithine transport membrane protein AotM
YP_001750625.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3886 arginine/ornithine transport protein AotQ (membrane)
YP_001750626.1	TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN3887 arginine/ornithine periplasmic-binding protein AotJ
YP_001750627.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_001750628.1	KEGG: pen:PSEEN3890 hypothetical protein
YP_001750629.1	PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: pen:PSEEN3891 phenylalanine hydroxylase gene cluster transcription activator
YP_001750630.1	phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin
YP_001750631.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
YP_001750632.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3896 transport protein (MFS family)
YP_001750633.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: pen:PSEEN3897 oxidase, FAD-binding
YP_001750634.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3898 transcriptional regulator, LysR family
YP_001750635.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN3899 aromatic amino acid transporter (APC family)
YP_001750636.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pen:PSEEN3900 ribosomal large subunit pseudouridine synthase B
YP_001750637.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: pen:PSEEN3901 hypothetical protein
YP_001750638.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: pen:PSEEN3902 hypothetical protein
YP_001750639.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: pen:PSEEN3903 hypothetical protein
YP_001750640.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pen:PSEEN3904 phosphoesterase (PHP family)
YP_001750641.1	Involved in cell division; probably involved in intracellular septation
YP_001750642.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
YP_001750643.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3908 two-component response regulator
YP_001750644.1	KEGG: pen:PSEEN3909 hypothetical protein
YP_001750645.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3910 sensor histidine kinase
YP_001750646.1	PFAM: nitroreductase; KEGG: pen:PSEEN3911 nitroreductase
YP_001750647.1	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: pen:PSEEN3912 potassium uptake protein, TrkH family
YP_001750648.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3913 transcriptional regulator, AraC family
YP_001750649.1	KEGG: pen:PSEEN3914 hypothetical protein
YP_001750650.1	PFAM: metallophosphoesterase; KEGG: pen:PSEEN3916 metallo-dependent phosphoesterase
YP_001750651.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3917 transcriptional regulator, AraC family
YP_001750652.1	PFAM: protein of unknown function DUF6 transmembrane; UAA transporter; KEGG: pen:PSEEN3918 hypothetical protein
YP_001750653.1	TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: pen:PSEEN3919 hypothetical protein
YP_001750654.1	PFAM: Patatin; surface antigen variable number repeat protein; KEGG: pen:PSEEN3920 hypothetical protein
YP_001750655.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN3921 transcriptional regulator, MarR family
YP_001750656.1	KEGG: pen:PSEEN3922 ATP-dependent DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases
YP_001750657.1	TIGRFAM: yecA family protein; KEGG: pen:PSEEN3923 hypothetical protein
YP_001750658.1	PFAM: protein of unknown function DUF454; KEGG: pen:PSEEN3924 hypothetical protein
YP_001750659.1	TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; KEGG: pfo:Pfl_1463 VCBS
YP_001750660.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN3927 type I secretion outer membrane protein, TolC
YP_001750661.1	KEGG: pen:PSEEN3928 multidrug/toxin efflux protein, ATP binding and membrane protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001750662.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN3929 type I secretion membrane fusion protein, HlyD
YP_001750663.1	PFAM: DTW domain containing protein; KEGG: pen:PSEEN3930 hypothetical protein
YP_001750664.1	KEGG: pen:PSEEN3931 aerotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: PAS domain containing protein
YP_001750665.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3932 transcriptional regulator, LysR family
YP_001750666.1	TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pen:PSEEN3933 agmatinase
YP_001750667.1	PFAM: Na+/solute symporter; KEGG: pen:PSEEN3934 sodium-solute symporter
YP_001750668.1	KEGG: pen:PSEEN3935 hypothetical protein
YP_001750669.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3936 transcriptional regulator, LysR family
YP_001750670.1	PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: pen:PSEEN3937 hypothetical protein
YP_001750671.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3940 hypothetical protein
YP_001750672.1	KEGG: pfl:PFL_1560 hypothetical protein
YP_001750673.1	KEGG: pfl:PFL_0170 hypothetical protein
YP_001750674.1	PFAM: protein of unknown function DUF497; KEGG: pen:PSEEN3950 hypothetical protein
YP_001750675.1	PFAM: regulatory protein LuxR; KEGG: pde:Pden_3582 response regulator receiver protein
YP_001750676.1	KEGG: pen:PSEEN3948 hypothetical protein
YP_001750677.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN3951 ATP-dependent RNA helicase, DEAD box family
YP_001750678.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pen:PSEEN3952 transporter with mechanosensitive ion channel
YP_001750679.1	PFAM: Auxin Efflux Carrier; KEGG: pmy:Pmen_0140 auxin efflux carrier
YP_001750680.1	TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3958 transport protein
YP_001750681.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: pen:PSEEN3959 acyl carrier protein phosphodiesterase
YP_001750682.1	KEGG: pen:PSEEN3960 hypothetical protein
YP_001750683.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3961 transcriptional regulator, LysR family
YP_001750684.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN3962 hydrolase, alpha/beta fold family
YP_001750685.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: pen:PSEEN3963 peptidyl-prolyl cis-trans isomerase A (rotamase A)
YP_001750686.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3964 ABC transporter, ATP-binding protein/permease protein
YP_001750687.1	PFAM: protein of unknown function DUF482; KEGG: pen:PSEEN3965 hypothetical protein
YP_001750688.1	KEGG: pen:PSEEN3966 hypothetical protein
YP_001750689.1	catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001750690.1	KEGG: pen:PSEEN3969 ATP-dependent helicase; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases
YP_001750691.1	KEGG: pen:PSEEN3970 hypothetical protein
YP_001750692.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN3971 glutamine synthetase
YP_001750693.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN3972 oxidoreductase
YP_001750694.1	activates fatty acids by binding to coenzyme A; involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids
YP_001750695.1	Disruption of the fadD2 gene did not have any effect on the catabolism of acetic, butyric and longer fatty acids (aliphatic or aromatic); however, might be involved in the specific activation of other fatty acids and may be functional when FadD1 is inactivated.
YP_001750696.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN3976 hydrolase, alpha/beta fold family
YP_001750697.1	PFAM: MaoC domain protein dehydratase; KEGG: pen:PSEEN3977 enoyl-CoA hydratase, R-specific
YP_001750698.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Tetratricopeptide TPR_2 repeat protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN3978 RNA polymerase sigma-70 factor, ECF subfamily
YP_001750699.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pen:PSEEN3979 hypothetical protein
YP_001750700.1	PFAM: DGPFAETKE family protein; KEGG: pen:PSEEN3980 hypothetical protein
YP_001750701.1	KEGG: pen:PSEEN3981 hypothetical protein
YP_001750702.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3997 transporter, LysE family
YP_001750703.1	PFAM: HicB family protein; KEGG: eba:ebA6033 conserved hypothetical protein, predicted HicB family potentially involved in pilus regulation
YP_001750704.1	KEGG: rsq:Rsph17025_4181 hypothetical protein
YP_001750705.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3999 threonine dehydratase
YP_001750706.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN4000 transcriptional regulator, GntR family
YP_001750707.1	KEGG: pen:PSEEN4001 hypothetical protein
YP_001750708.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN4002 acetyltransferase, GNAT family
YP_001750709.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001750710.1	PFAM: ribonuclease BN; KEGG: pen:PSEEN4004 ribonuclease BN
YP_001750711.1	PFAM: CsbD family protein; KEGG: pen:PSEEN4005 hypothetical protein
YP_001750712.1	KEGG: aci:ACIAD1714 3-dehydroshikimate dehydratase (DHS dehydratase) (DHSase)
YP_001750713.1	KEGG: pen:PSEEN4006 hypothetical protein
YP_001750714.1	SMART: RNA binding S1 domain protein; KEGG: pen:PSEEN4007 hypothetical protein
YP_001750715.1	KEGG: pen:PSEEN4008 lipoprotein
YP_001750716.1	catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol
YP_001750717.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4010 hypothetical protein
YP_001750718.1	KEGG: pfl:PFL_0005 hypothetical protein
YP_001750719.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4011 hypothetical protein
YP_001750720.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: pen:PSEEN4012 aspartyl/asparaginyl beta-hydroxylase
YP_001750721.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN4013 cysteine synthase A
YP_001750722.1	KEGG: pfl:PFL_1518 hypothetical protein
YP_001750723.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN4014 ATPase, AAA family
YP_001750724.1	KEGG: pen:PSEEN4015 hypothetical protein
YP_001750725.1	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: pen:PSEEN4016 allophanate hydrolase subunit 2
YP_001750726.1	PFAM: Allophanate hydrolase subunit 1; KEGG: pen:PSEEN4017 allophanate hydrolase subunit 1
YP_001750727.1	PFAM: LamB/YcsF family protein; KEGG: pen:PSEEN4018 hypothetical protein
YP_001750728.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN4019 transporter, MFS family
YP_001750729.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4020 transcriptional regulator, LysR family
YP_001750730.1	KEGG: psp:PSPPH_5070 hypothetical protein
YP_001750731.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; PAAR repeat-containing protein; KEGG: psp:PSPPH_5072 rhs family protein
YP_001750732.1	KEGG: psb:Psyr_4989 hypothetical protein
YP_001750733.1	PFAM: RHS protein; KEGG: ypp:YPDSF_0215 hypothetical protein
YP_001750734.1	KEGG: ypn:YPN_3562 hypothetical protein
YP_001750735.1	KEGG: psp:PSPPH_4833 rhs family protein
YP_001750736.1	KEGG: pen:PSEEN4022 hypothetical protein
YP_001750737.1	PFAM: glutamine amidotransferase class-II; KEGG: pen:PSEEN4023 glutamine amidotransferase, class II
YP_001750738.1	KEGG: pen:PSEEN4024 hypothetical protein
YP_001750739.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: pen:PSEEN4025 peptidase, S9 family
YP_001750740.1	PFAM: cyclic nucleotide-binding; KEGG: pen:PSEEN4026 hypothetical protein
YP_001750741.1	KEGG: pen:PSEEN4027 hypothetical protein
YP_001750742.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pfl:PFL_1503 hypothetical protein
YP_001750743.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pen:PSEEN4029 hypothetical protein
YP_001750744.1	KEGG: pfo:Pfl_1394 hypothetical protein
YP_001750745.1	KEGG: pen:PSEEN4030 hypothetical protein
YP_001750746.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN4031 hypothetical protein
YP_001750747.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pen:PSEEN4033 D-isomer specific 2-hydroxyacid dehydrogenase
YP_001750748.1	PFAM: protein of unknown function DUF709; KEGG: pen:PSEEN4034 hypothetical protein
YP_001750749.1	TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: pen:PSEEN4035 ribonuclease D, processes tRNA
YP_001750750.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: pen:PSEEN4037 5-carboxymethyl-2-hydroxymuconate delta isomerase
YP_001750751.1	KEGG: pen:PSEEN4038 hypothetical protein
YP_001750752.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pen:PSEEN4039 cystathionine gamma-synthase
YP_001750753.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN4041 transcriptional regulator, AsnC familiy
YP_001750754.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pen:PSEEN4042 molybdopterin oxidoreductase, alpha subunit
YP_001750755.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_001750756.1	PFAM: protein of unknown function UPF0187; KEGG: pen:PSEEN4044 hypothetical protein
YP_001750757.1	TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: pen:PSEEN4045 molybdopterin biosynthesis protein B
YP_001750758.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4046 transcriptional regulator, LysR family
YP_001750760.1	KEGG: mmu:100042292 similar to CG10953-PA
YP_001750761.1	PFAM: 17 kDa surface antigen; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: psp:PSPPH_0908 lipoprotein, putative
YP_001750762.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pen:PSEEN4054 xenobiotic reductase A
YP_001750763.1	PFAM: regulatory protein ArsR; KEGG: pen:PSEEN4055 transcriptional regulator, ArsR family
YP_001750764.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_001750765.1	KEGG: pen:PSEEN4057 hypothetical protein
YP_001750766.1	KEGG: pen:PSEEN2483 hypothetical protein
YP_001750767.1	KEGG: noc:Noc_0408 hypothetical protein
YP_001750768.1	KEGG: pap:PSPA7_0775 lipoprotein, putative
YP_001750769.1	KEGG: pap:PSPA7_2431 hypothetical protein
YP_001750770.1	KEGG: pmy:Pmen_3951 hypothetical protein
YP_001750771.1	KEGG: psb:Psyr_2860 hypothetical protein
YP_001750772.1	KEGG: psb:Psyr_2860 hypothetical protein
YP_001750776.1	PFAM: Protein of unknown function DUF1983; KEGG: psb:Psyr_2772 fibronectin, type III
YP_001750777.1	PFAM: lambda tail assembly I; KEGG: psb:Psyr_2774 bacteriophage lambda tail assembly I
YP_001750778.1	KEGG: ype:YPO2128 putative phage-related lipoprotein
YP_001750779.1	PFAM: NLP/P60 protein; SMART: Mov34/MPN/PAD-1 family protein; KEGG: psb:Psyr_2777 NLP/P60
YP_001750780.1	TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L; KEGG: pap:PSPA7_2419 phage minor tail protein L
YP_001750781.1	PFAM: minor tail family protein; KEGG: pap:PSPA7_2418 phage minor tail protein
YP_001750782.1	TIGRFAM: phage tail tape measure protein, lambda family; phage tape measure protein; PFAM: Tape measure domain; KEGG: pfl:PFL_3753 prophage LambdaSo, tail length tape meausure protein, putative
YP_001750785.1	KEGG: mes:Meso_1894 hypothetical protein
YP_001750786.1	KEGG: rpc:RPC_1815 gene transfer agent (GTA) orfg8
YP_001750787.1	TIGRFAM: phage protein, HK97 gp10 family
YP_001750789.1	TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein; KEGG: dvu:DVU1497 head-tail adaptor, putative
YP_001750790.1	TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: asu:Asuc_1241 uncharacterized phage protein
YP_001750791.1	KEGG: ncr:NCU07868.1 hypothetical protein
YP_001750792.1	TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: rsh:Rsph17029_3318 phage major capsid protein, HK97 family
YP_001750793.1	TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: xau:Xaut_3708 phage prohead protease, HK97 family
YP_001750794.1	TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: sgl:SG0723 phage portal protein
YP_001750795.1	PFAM: Terminase; KEGG: ecs:ECs2251 putative terminase large subunit
YP_001750796.1	KEGG: bte:BTH_II1043 hypothetical protein
YP_001750797.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mpt:Mpe_A0538 hypothetical protein
YP_001750799.1	TIGRFAM: phage holin, lambda family; PFAM: Holin phage lambda; KEGG: pfl:PFL_3770 holin, lambda family
YP_001750800.1	KEGG: sdn:Sden_2835 hypothetical protein
YP_001750801.1	KEGG: hch:HCH_00599 hypothetical protein
YP_001750804.1	PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; KEGG: pmy:Pmen_0649 replicative DNA helicase
YP_001750805.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpl:BURPS1106A_1434 DNA replication protein DnaC, putative
YP_001750806.1	KEGG: pna:Pnap_2260 hypothetical protein
YP_001750809.1	KEGG: mgm:Mmc1_2768 hypothetical protein
YP_001750813.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: pfl:PFL_2126 transcriptional regulator, Cro/CI family
YP_001750814.1	PFAM: regulatory protein LuxR; KEGG: pen:PSEEN2243 LuxR family DNA binding protein
YP_001750815.1	PFAM: carbon storage regulator; KEGG: cbs:COXBURSA331_A0885 carbon storage regulator
YP_001750816.1	KEGG: pst:PSPTO_3946 hypothetical protein
YP_001750817.1	KEGG: pst:PSPTO_3947 hypothetical protein
YP_001750820.1	PFAM: integrase family protein; KEGG: pst:PSPTO_3949 site-specific recombinase, phage integrase family
YP_001750821.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_001750822.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN4062 beta-lactamase-like
YP_001750823.1	KEGG: pen:PSEEN4063 lipoprotein
YP_001750824.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_001750825.1	KEGG: pen:PSEEN4066 glycine cleavage system transcriptional repressor
YP_001750826.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN4067 hypothetical protein
YP_001750827.1	PFAM: protein of unknown function UPF0118; KEGG: pen:PSEEN4068 permease (PerM family)
YP_001750828.1	PFAM: SirA family protein; KEGG: pen:PSEEN4069 hypothetical protein
YP_001750829.1	PFAM: peptidase M48 Ste24p; KEGG: pen:PSEEN4070 peptidase M48 family
YP_001750830.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_001750831.1	PFAM: protein of unknown function DUF945; KEGG: pen:PSEEN4072 hypothetical protein
YP_001750832.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN4074 amino acid transport protein (APC family)
YP_001750833.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN4075 methyl-accepting chemotaxis transducer
YP_001750834.1	PFAM: cation efflux protein; KEGG: rpa:RPA2440 cation efflux protein
YP_001750835.1	KEGG: sbm:Shew185_1994 hypothetical protein
YP_001750836.1	KEGG: sbn:Sbal195_2043 hypothetical protein
YP_001750837.1	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: sbl:Sbal_1981 FAD dependent oxidoreductase
YP_001750838.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: pen:PSEEN4083 hypothetical protein
YP_001750839.1	PFAM: Radical SAM domain protein; KEGG: pen:PSEEN4084 radical activating enzyme
YP_001750840.1	TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: pen:PSEEN4085 hypothetical protein
YP_001750841.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN4086 peptidoglycan-associated lipoprotein precursor
YP_001750842.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_001750843.1	TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: pen:PSEEN4088 biopolymer transport protein TolA
YP_001750844.1	TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pen:PSEEN4089 biopolymer transport protein TolR
YP_001750845.1	TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: pen:PSEEN4090 biopolymer transport protein TolQ
YP_001750846.1	TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN4091 thioesterase
YP_001750847.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_001750848.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_001750849.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_001750850.1	PFAM: protein of unknown function DUF28; KEGG: pen:PSEEN4095 hypothetical protein
YP_001750851.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_001750852.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: pen:PSEEN4097 hypothetical protein
YP_001750853.1	KEGG: pen:PSEEN4098 hypothetical protein
YP_001750854.1	PFAM: Ferritin Dps family protein; KEGG: pen:PSEEN4099 DNA-binding stress protein, Dps family
YP_001750855.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pen:PSEEN4100 cold shock protein
YP_001750856.1	PFAM: SlyX family protein; KEGG: pen:PSEEN4101 hypothetical protein
YP_001750857.1	PFAM: histidine triad (HIT) protein; KEGG: pen:PSEEN4102 hypothetical protein
YP_001750858.1	PFAM: outer membrane porin; KEGG: pen:PSEEN4104 porin D
YP_001750859.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_001750860.1	KEGG: pen:PSEEN4106 lipoprotein
YP_001750861.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_001750862.1	PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: pen:PSEEN4110 hypothetical protein
YP_001750863.1	PFAM: virulence factor family protein; KEGG: pen:PSEEN4111 hypothetical protein
YP_001750864.1	PFAM: K potassium transporter; KEGG: pen:PSEEN4112 Kup system potassium uptake protein
YP_001750865.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_001750866.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN4114 acyltransferase, GNAT family
YP_001750867.1	PFAM: RNA-binding S4 domain protein; KEGG: pen:PSEEN4116 hypothetical protein
YP_001750868.1	PFAM: protein of unknown function DUF1456; KEGG: pen:PSEEN4117 hypothetical protein
YP_001750869.1	PFAM: protein of unknown function UPF0066; KEGG: pen:PSEEN4118 hypothetical protein
YP_001750870.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN4119 ferredoxin--NADP+ reductase
YP_001750871.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4120 transcriptional regulator, LysR family
YP_001750872.1	PFAM: diacylglycerol kinase; KEGG: pen:PSEEN4121 diacylglycerol kinase
YP_001750873.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pen:PSEEN4122 DNA-binding response regulator, LuxR family
YP_001750874.1	PFAM: DTW domain containing protein; KEGG: pen:PSEEN4123 hypothetical protein
YP_001750875.1	KEGG: pen:PSEEN4124 hypothetical protein
YP_001750876.1	KEGG: pen:PSEEN4125 hypothetical protein
YP_001750877.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN4126 hypothetical protein
YP_001750878.1	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities
YP_001750879.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_001750880.1	PFAM: CinA domain protein; KEGG: pen:PSEEN4129 hypothetical protein
YP_001750881.1	KEGG: pen:PSEEN4130 phage protein
YP_001750882.1	PFAM: glycoside hydrolase family 19; KEGG: pen:PSEEN4131 pyocin R2_PP, lytic enzyme
YP_001750883.1	PFAM: late control D family protein; KEGG: pen:PSEEN4149 pyocin R2_PP, tail formation GpD
YP_001750884.1	PFAM: tail X family protein; KEGG: pfl:PFL_2015 tail protein X-related protein
YP_001750885.1	PFAM: P2 GpU family protein; KEGG: pen:PSEEN4151 pyocin R2_PP, tail formation protein gpU
YP_001750886.1	KEGG: pen:PSEEN4152 pyocin R2_PP, tail length determination protein
YP_001750887.1	KEGG: pen:PSEEN4153 hypothetical protein
YP_001750888.1	TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pen:PSEEN4154 pyocin R2_PP, tail tube protein GpFII
YP_001750889.1	PFAM: tail sheath protein; KEGG: pen:PSEEN4155 pyocin R2_PP, tail sheath protein gpFI
YP_001750890.1	KEGG: pae:PA0621 hypothetical protein
YP_001750891.1	KEGG: pst:PSPTO_3398 tail fiber protein H, putative
YP_001750892.1	TIGRFAM: phage tail protein I; PFAM: Inorganic pyrophosphatase; KEGG: pen:PSEEN4160 pyocin R2_PP, tail formation protein GpI
YP_001750893.1	PFAM: Baseplate J family protein; KEGG: pen:PSEEN4161 pyocin R2_PP, baseplate/tail fiber protein
YP_001750894.1	PFAM: GPW/gp25 family protein; KEGG: pen:PSEEN4162 pyocin R2_PP, baseplate protein
YP_001750895.1	TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: pen:PSEEN4163 pyocin R2_PP, tail spike protein
YP_001750896.1	KEGG: pen:PSEEN4164 phage protein
YP_001750897.1	KEGG: pen:PSEEN4184 pyocin R2_PP, holin
YP_001750898.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: pen:PSEEN4186 transcriptional regulator
YP_001750899.1	This protein performs the mismatch recognition step during the DNA repair process
YP_001750900.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pen:PSEEN4188 ferredoxin
YP_001750901.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses
YP_001750902.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: pen:PSEEN4190 peptidase M23B
YP_001750903.1	catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins
YP_001750904.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_001750905.1	catalyzes the modification of U13 in tRNA(Glu)
YP_001750906.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
YP_001750907.1	KEGG: pen:PSEEN4195 esterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase
YP_001750908.1	TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN4196 alcohol dehydrogenase class III
YP_001750909.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4197 transcriptional regulator, LysR family
YP_001750910.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
YP_001750911.1	PFAM: Septum formation initiator; KEGG: pen:PSEEN4199 cell division protein FtsB-like
YP_001750912.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_001750913.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_001750914.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: pen:PSEEN4203 cell cycle protein MesJ
YP_001750915.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_001750916.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_001750917.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_001750918.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_001750919.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_001750920.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_001750921.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_001750922.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: pen:PSEEN4211 outer membrane protein OmpH-like
YP_001750923.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: pen:PSEEN4212 outer membrane protein, bacterial surface antigen family
YP_001750924.1	KEGG: pen:PSEEN4213 membrane-associated Zn-dependent proteases 1; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein
YP_001750925.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_001750926.1	PFAM: phosphatidate cytidylyltransferase; KEGG: pen:PSEEN4215 phosphatidate cytidylyltransferase
YP_001750927.1	KEGG: pen:PSEEN4216 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_001750928.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_001750929.1	Catalyzes the phosphorylation of UMP to UDP
YP_001750930.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_001750931.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_001750932.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_001750933.1	Catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_001750934.1	catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate
YP_001750935.1	TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: pen:PSEEN4225 sodium:hydrogen antiporter (CPA1 family)
YP_001750936.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: pst:PSPTO_0214 virulence-associated protein, putative
YP_001750937.1	PFAM: arsenate reductase and related; KEGG: pen:PSEEN4226 hypothetical protein
YP_001750938.1	KEGG: pen:PSEEN4227 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD
YP_001750939.1	PFAM: aminotransferase class V; KEGG: pen:PSEEN4228 cysteine sulfinate desulfinase
YP_001750940.1	PFAM: Fe-S metabolism associated SufE; KEGG: pen:PSEEN4229 hypothetical protein
YP_001750941.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: pen:PSEEN4230 hypothetical protein
YP_001750942.1	PFAM: glycoside hydrolase family 17; glycosyl transferase family 2; KEGG: pen:PSEEN4231 glycosyl transferase
YP_001750943.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_001750944.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN4233 23S rRNA m1G745 methyltransferase RrmA
YP_001750945.1	KEGG: pen:PSEEN4234 hypothetical protein
YP_001750946.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pen:PSEEN4235 cold shock protein CspE-like
YP_001750947.1	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA
YP_001750948.1	KEGG: pen:PSEEN4238 lipoprotein
YP_001750949.1	KEGG: pen:PSEEN4239 hypothetical protein
YP_001750950.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN4240 Acr-type multidrug efflux transporter (RND family)
YP_001750951.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4241 multidrug RND transporter, membrane fusion protein
YP_001750952.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN4243 transcriptional regulator, TetR family
YP_001750953.1	PFAM: protein of unknown function DUF548; KEGG: pen:PSEEN1271 hypothetical protein
YP_001750954.1	KEGG: pen:PSEEN1270 hypothetical protein
YP_001750955.1	PFAM: Extensin family protein; KEGG: pst:PSPTO_1513 hypothetical protein
YP_001750956.1	KEGG: pen:PSEEN1269 carboxyvinyl-carboxyphosphonate phosphorylmutase
YP_001750957.1	PFAM: protein of unknown function DUF72; KEGG: pen:PSEEN1268 hypothetical protein
YP_001750958.1	KEGG: pen:PSEEN1267 hypothetical protein
YP_001750959.1	PFAM: peptidase M22 glycoprotease; KEGG: pen:PSEEN1266 glycoprotein endopeptidase metalloprotease
YP_001750960.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_001750961.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
YP_001750962.1	KEGG: pen:PSEEN1263 hypothetical protein
YP_001750963.1	KEGG: pen:PSEEN1262 hypothetical protein
YP_001750964.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1261 outer membrane protein; OmpA family
YP_001750965.1	KEGG: pen:PSEEN1260 hypothetical protein
YP_001750966.1	KEGG: pen:PSEEN1259 lipoprotein
YP_001750967.1	PFAM: protein of unknown function DUF1704; KEGG: pen:PSEEN1258 hypothetical protein
YP_001750968.1	KEGG: pen:PSEEN1257 lipoprotein
YP_001750969.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN1256 transcriptional regulator, TetR family
YP_001750970.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_001750971.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: pen:PSEEN1254 peptide chain release factor 2
YP_001750973.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: pen:PSEEN1251 response regulator/GGDEF domain protein
YP_001750974.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_001750975.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: pen:PSEEN1249 sensor histidine kinase/response regulator hybrid
YP_001750976.1	PFAM: CheW domain protein; KEGG: pen:PSEEN1248 chemotaxis signal transduction protein; CheW domain protein
YP_001750977.1	PFAM: MCP methyltransferase CheR-type; KEGG: pen:PSEEN1247 methyltransferase, CheR-like
YP_001750978.1	PFAM: CheW domain protein; KEGG: pen:PSEEN1246 chemotaxis signal transduction protein; CheW domain protein
YP_001750979.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1245 methyl-accepting chemotaxis transducer
YP_001750980.1	PFAM: protein of unknown function DUF533; KEGG: pen:PSEEN1243 hypothetical protein
YP_001750981.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN1242 ABC transporter, periplasmic polyamine-binding protein
YP_001750982.1	KEGG: pen:PSEEN1241 ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001750983.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1240 ABC transporter, permease protein
YP_001750984.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1239 ABC transporter, permease protein
YP_001750985.1	catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation
YP_001750986.1	KEGG: pen:PSEEN1237 hypothetical protein
YP_001750987.1	PFAM: HicB family protein; KEGG: pen:PSEEN1236 hypothetical protein
YP_001750988.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pen:PSEEN1235 oxidireductase
YP_001750991.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: pen:PSEEN4244 ssDNA specific exonuclease RecJ
YP_001750992.1	PFAM: YaeQ family protein; KEGG: psb:Psyr_1297 YaeQ
YP_001750993.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pen:PSEEN4246 CaiB/BaiF family protein
YP_001750994.1	KEGG: pen:PSEEN4247 hypothetical protein
YP_001750995.1	KEGG: pen:PSEEN4248 hypothetical protein
YP_001750996.1	KEGG: pen:PSEEN4249 hypothetical protein
YP_001750997.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_001750998.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_001750999.1	KEGG: pen:PSEEN4253 thiol:disulfide interchange protein DsbC
YP_001751000.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_001751001.1	PFAM: sodium/hydrogen exchanger; KEGG: pen:PSEEN4255 sodium/hydrogen exchanger family protein
YP_001751002.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN4256 long-chain acyl-CoA thioester hydrolase
YP_001751003.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_001751004.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_001751005.1	Essential for efficient processing of 16S rRNA
YP_001751006.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_001751007.1	KEGG: pen:PSEEN4261 4.5S-RNP protein, GTP binding export factor, part of signal recognition particle with 4.5 RNA; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001751008.1	PFAM: cytochrome c assembly protein; KEGG: pen:PSEEN4262 cytochrome c assembly protein
YP_001751009.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: pen:PSEEN4263 hypothetical protein
YP_001751010.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN4264 citrate-proton symporter (MFS superfamily)
YP_001751011.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
YP_001751012.1	PFAM: protein of unknown function DUF165; KEGG: pen:PSEEN4266 hypothetical protein
YP_001751013.1	PFAM: protein of unknown function DUF1289; KEGG: pen:PSEEN4267 hypothetical protein
YP_001751014.1	KEGG: pen:PSEEN4268 transferase family protein
YP_001751015.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN4269 hydrolase, MutT/NUDIX family protein
YP_001751016.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN4270 hydrolase, MutT/NUDIX family protein
YP_001751017.1	KEGG: pen:PSEEN4271 hypothetical protein
YP_001751018.1	PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: pfl:PFL_4236 activation/secretion protein, TPS family, putative
YP_001751019.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: pap:PSPA7_4642 hemolysin
YP_001751020.1	KEGG: pen:PSEEN4272 type II secretion system protein N
YP_001751021.1	KEGG: pen:PSEEN4273 type II secretion system protein M
YP_001751022.1	TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: pen:PSEEN4274 type II secretion pathway protein L
YP_001751023.1	KEGG: pen:PSEEN4275 type II secretion system protein J
YP_001751024.1	PFAM: type II secretion system protein I/J; KEGG: pen:PSEEN4276 type II secretion system protein I
YP_001751025.1	TIGRFAM: general secretion pathway protein H; KEGG: pen:PSEEN4277 type II secretion system protein H
YP_001751026.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: pen:PSEEN4278 type II secretion system protein G
YP_001751027.1	TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: pen:PSEEN4279 type II secretion system protein F
YP_001751028.1	PFAM: type II secretion system protein E; KEGG: pen:PSEEN4280 type II secretion system protein E
YP_001751029.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: pen:PSEEN4281 type II secretion system protein D
YP_001751030.1	KEGG: pen:PSEEN4282 type II secretion protein C
YP_001751031.1	KEGG: pen:PSEEN4283 lipoprotein UxpA
YP_001751032.1	PFAM: protein of unknown function DUF839; KEGG: pen:PSEEN4284 hypothetical protein
YP_001751033.1	PFAM: General secretion pathway protein K; KEGG: pen:PSEEN4375 type II secretion system protein K (XcpX)
YP_001751034.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: pen:PSEEN4376 twin-arginine translocation protein TatA
YP_001751035.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: psa:PST_0334 translocation protein TatB
YP_001751036.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: pmy:Pmen_0516 sec-independent protein translocase, TatC subunit
YP_001751037.1	KEGG: pen:PSEEN4385 hypothetical protein
YP_001751038.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_001751039.1	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function
YP_001751040.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pen:PSEEN4389 cytidine/deoxycytidylate deaminase
YP_001751041.1	PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pen:PSEEN4390 Mn2+ multicopper oxidase CumA
YP_001751042.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_001751043.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_001751044.1	KEGG: pen:PSEEN4394 hypothetical protein
YP_001751045.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN4395 hypothetical protein
YP_001751046.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_001751047.1	PFAM: peptidase M23B; KEGG: pen:PSEEN4398 peptidase, M23/M37 family
YP_001751048.1	KEGG: pen:PSEEN4399 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain
YP_001751049.1	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate
YP_001751050.1	TIGRFAM: 6-phosphogluconolactonase; KEGG: pen:PSEEN4404 6-phosphogluconolactonase
YP_001751051.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001751052.1	Represses the expression of the zwf, eda, glp and gap
YP_001751053.1	PFAM: Aldose 1-epimerase; KEGG: pen:PSEEN4407 hypothetical protein
YP_001751054.1	PFAM: Carbohydrate-selective porin OprB; KEGG: pen:PSEEN4408 glucose-selective porin OprB
YP_001751055.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN4409 glucose ABC transporter, ATP-binding subunit
YP_001751056.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_4368 binding-protein-dependent transport systems inner membrane component
YP_001751057.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN4411 glucose ABC transporter, permease protein
YP_001751058.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN4412 glucose ABC transporter, periplasmic sugar-binding protein
YP_001751059.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: pen:PSEEN4413 N-acyl-D-glucosamine 2-epimerase
YP_001751060.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN4414 sensor histidine kinase
YP_001751061.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN4415 two-component response regulator GltR
YP_001751062.1	catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate
YP_001751063.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_001751064.1	KEGG: pen:PSEEN4418 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001751065.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN4420 RNA polymerase sigma-70 factor, ECF subfamily
YP_001751066.1	PFAM: FecR protein; KEGG: pen:PSEEN4421 FecR-like transmembrane sensor
YP_001751067.1	TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN4422 TonB-dependent outer membrane heme receptor
YP_001751068.1	PFAM: Haem oxygenase; KEGG: pen:PSEEN4423 heme oxygenase
YP_001751069.1	PFAM: protein of unknown function DUF454; KEGG: pen:PSEEN4424 hypothetical protein
YP_001751070.1	TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: pen:PSEEN4426 arginine/ornithine antiporter
YP_001751071.1	TIGRFAM: arginine/ornithine antiporter; PFAM: Spore germination protein; amino acid permease-associated region; KEGG: pen:PSEEN4427 arginine/ornithine antiporter
YP_001751072.1	catalyzes the degradation of arginine to citruline and ammonia
YP_001751073.1	catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway
YP_001751074.1	reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP
YP_001751075.1	KEGG: pen:PSEEN4431 hypothetical protein
YP_001751076.1	PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: pen:PSEEN4432 sigma-54 dependent transcriptional regulator
YP_001751077.1	PFAM: sodium/glutamate symporter; KEGG: cvi:CV_1105 sodium/glutamate symport carrier protein
YP_001751078.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_001751079.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_001751080.1	KEGG: pen:PSEEN4437 L-serine deaminase I; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_001751081.1	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: pen:PSEEN4438 glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent
YP_001751082.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: psa:PST_3054 cold acclimation protein B
YP_001751083.1	PFAM: RDD domain containing protein; KEGG: pen:PSEEN4440 hypothetical protein
YP_001751084.1	PFAM: permease YjgP/YjgQ family protein; KEGG: pen:PSEEN4441 hypothetical protein
YP_001751085.1	PFAM: permease YjgP/YjgQ family protein; KEGG: pen:PSEEN4442 hypothetical protein
YP_001751086.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_001751087.1	binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
YP_001751088.1	KEGG: pen:PSEEN4445 hypothetical protein
YP_001751089.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_001751090.1	PFAM: protein of unknown function DUF890; KEGG: pen:PSEEN4447 hypothetical protein
YP_001751091.1	PFAM: histone family protein DNA-binding protein; KEGG: pen:PSEEN4448 DNA-binding protein HU form N
YP_001751092.1	PFAM: 37kDa nucleoid-associated protein; KEGG: pen:PSEEN4449 nucleoid-associated protein
YP_001751093.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: pen:PSEEN4450 endonuclease
YP_001751094.1	KEGG: pen:PSEEN4451 hypothetical protein
YP_001751095.1	TIGRFAM: cyanate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4452 cyanate MFS transporter
YP_001751096.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN4453 transcriptional regulator, GntR family
YP_001751097.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_001751098.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_001751099.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
YP_001751100.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_001751101.1	PFAM: BolA family protein; KEGG: pen:PSEEN1104 toluene-tolerance protein Ttg2F
YP_001751102.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pen:PSEEN1103 toluene-tolerance protein TtgE
YP_001751103.1	PFAM: toluene tolerance family protein; KEGG: pen:PSEEN1102 toluene tolerance protein Ttg2D
YP_001751104.1	PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN1101 toluene tolerance ABC transporter, periplasmic substrate-binding protein
YP_001751105.1	PFAM: protein of unknown function DUF140; KEGG: pen:PSEEN1100 toluene tolerance ABC efflux transporter, permease
YP_001751106.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1099 toluene tolerance ABC efflux transporter, ATP-binding protein
YP_001751107.1	KEGG: pen:PSEEN1098 hypothetical protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_001751108.1	TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: pen:PSEEN1097 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
YP_001751109.1	PFAM: protein of unknown function DUF1239; KEGG: pen:PSEEN1096 hypothetical protein
YP_001751110.1	TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: pen:PSEEN1095 hypothetical protein
YP_001751111.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1094 ABC transporter, ATP-binding protein
YP_001751112.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
YP_001751113.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: pen:PSEEN1092 sigma N (sigma 54) modulator RpoX
YP_001751114.1	TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: pen:PSEEN1091 phosphotransferase system, nitrogen regulatory IIA protein
YP_001751115.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN1090 uncharacterized ATPase
YP_001751116.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: pen:PSEEN1089 phosphocarrier protein (HPr-like) NPr
YP_001751117.1	PFAM: zinc/iron permease; KEGG: pen:PSEEN1088 hypothetical protein
YP_001751118.1	PFAM: manganese and iron superoxide dismutase; KEGG: pen:PSEEN1087 superoxide dismutase
YP_001751119.1	KEGG: pen:PSEEN1086 hypothetical protein
YP_001751120.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_001751121.1	KEGG: pen:PSEEN1084 hypothetical protein
YP_001751122.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: pen:PSEEN1083 peptidase U62 TldE
YP_001751123.1	PFAM: protein of unknown function DUF615; KEGG: pen:PSEEN1082 hypothetical protein
YP_001751124.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: pen:PSEEN1081 peptidase U62 TldD
YP_001751125.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN1080 hydrolase, carbon-nitrogen hydrolase family
YP_001751126.1	KEGG: pen:PSEEN1079 hypothetical protein
YP_001751127.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: pen:PSEEN1078 ibonuclease G
YP_001751128.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_001751129.1	TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: pen:PSEEN1076 rod shape-determining protein MreD
YP_001751130.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_001751131.1	functions in MreBCD complex in some organisms
YP_001751132.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
YP_001751133.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_001751134.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_001751135.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pen:PSEEN1070 lipoprotein, RplA family
YP_001751136.1	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: pen:PSEEN1069 K+-dependent Na+/Ca+ antiporter
YP_001751137.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN1067 aromatic amino acid transporter, APC family
YP_001751138.1	PFAM: Auxin Efflux Carrier; KEGG: pen:PSEEN1066 hypothetical protein
YP_001751139.1	PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: pen:PSEEN1063 response regulator, RegA/PrrA/ActR type
YP_001751140.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1062 sensor histidine kinase
YP_001751141.1	PFAM: protein of unknown function DUF541; KEGG: pen:PSEEN1061 hypothetical protein
YP_001751142.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN1060 dipeptide ABC transporter, periplasmic peptide-binding protein
YP_001751143.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN1059 dipeptide ABC transporter, periplasmic peptide-binding protein
YP_001751144.1	PFAM: outer membrane porin; KEGG: pen:PSEEN1058 porin, OprD family
YP_001751145.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN1057 dipeptide ABC transporter, periplasmic dipeptide-binding protein
YP_001751146.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1056 dipeptide ABC transporter, permease protein
YP_001751147.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1055 dipeptide ABC transporter, permease protein
YP_001751148.1	KEGG: pen:PSEEN1054 dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001751149.1	Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides
YP_001751150.1	KEGG: pfl:PFL_2576 hypothetical protein
YP_001751151.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN1051 transcriptional regulator, AraC family
YP_001751152.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN1050 FAD dependent oxidoreductase
YP_001751153.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: pen:PSEEN1049 hypothetical protein
YP_001751154.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN1048 periplasmic polyamine-binding protein
YP_001751155.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
YP_001751156.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1043 glycine betaine/carnitine/choline ABC transporter, permease protein
YP_001751157.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN1042 glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein
YP_001751158.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1041 glycine betaine/carnitine/choline ABC transporter, permease protein
YP_001751159.1	KEGG: pen:PSEEN1040 glycine betaine/carnitine/choline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase
YP_001751160.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN1039 FecA-like outer membrane receptor
YP_001751161.1	PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor
YP_001751162.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1037 RNA polymerase sigma-70 factor, ECF family
YP_001751163.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pen:PSEEN1035 ornithine decarboxylase
YP_001751164.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN1032 hypothetical protein
YP_001751165.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: pen:PSEEN1031 PKHD-type hydroxylase; iron-uptake factor
YP_001751166.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN1029 TonB-dependent siderophore receptor
YP_001751167.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; KEGG: pen:PSEEN1028 sulfite reductase flavoprotein alpha-component; iron-regulated membrane protein
YP_001751168.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN1027 hydrolase, carbon-nitrogen hydrolase family
YP_001751169.1	catalyzes the transfer of an amino moiety
YP_001751170.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_001751171.1	TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: pen:PSEEN1024 hypothetical protein
YP_001751172.1	KEGG: pen:PSEEN1023 hypothetical protein
YP_001751173.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_001751174.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_001751175.1	SMART: helix-turn-helix domain protein; KEGG: pen:PSEEN1020 transcriptional regulator
YP_001751176.1	KEGG: pen:PSEEN1019 type IV pili biogenesis protein PilF; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001751177.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: pen:PSEEN1018 radical SAM enzyme, Cfr family
YP_001751178.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_001751179.1	TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: pen:PSEEN1016 hypothetical protein
YP_001751180.1	TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: pen:PSEEN1015 ferredoxin, 2Fe-2S type, ISC system
YP_001751181.1	involved in the maturation of iron-sulfur cluster-containing proteins
YP_001751182.1	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
YP_001751183.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: pen:PSEEN1012 iron-sulfur cluster assembly protein IscA
YP_001751184.1	TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: pfl:PFL_4964 scaffold protein
YP_001751185.1	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis
YP_001751186.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pen:PSEEN1009 iron-sulfur cluster assembly transcription factor IscR
YP_001751187.1	TIGRFAM: serine O-acetyltransferase; KEGG: pen:PSEEN1007 serine O-acetyltransferase
YP_001751188.1	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pen:PSEEN1006 tRNA/rRNA methyltransferase, TrmH family, group 1
YP_001751189.1	PFAM: inositol monophosphatase; KEGG: pen:PSEEN1005 inositol-1-monophosphatase (IMPase) (inositol-1-phosphatase) (I-1-Pase)
YP_001751190.1	PFAM: 17 kDa surface antigen; KEGG: pen:PSEEN1004 hypothetical protein
YP_001751191.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_001751192.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_001751193.1	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex
YP_001751194.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_001751195.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_001751196.1	PFAM: integrase family protein; KEGG: pst:PSPTO_5344 site-specific recombinase, phage integrase family
YP_001751197.1	KEGG: aci:ACIAD2140 hypothetical protein
YP_001751198.1	PFAM: Prophage CP4-57 regulatory; KEGG: pin:Ping_0242 phage transcriptional regulator, AlpA
YP_001751199.1	KEGG: pap:PSPA7_0363 virulence-associated protein E
YP_001751200.1	KEGG: pol:Bpro_2969 hypothetical protein
YP_001751202.1	PFAM: peptidase S14 ClpP; KEGG: sbn:Sbal195_0787 peptidase S14 ClpP
YP_001751203.1	PFAM: integrase family protein; KEGG: vvy:VVA0857 phage integrase
YP_001751205.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: pna:Pnap_4940 filamentation induced by cAMP protein Fic
YP_001751206.1	KEGG: ppr:PBPRA0472 hypothetical protein
YP_001751207.1	PFAM: protein of unknown function UPF0187; KEGG: pen:PSEEN0996 hypothetical protein
YP_001751208.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0995 phosphonate ABC transporter, permease protein
YP_001751209.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0994 phosphonate ABC transporter, permease protein
YP_001751210.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0993 phosphonate ABC transporter, ATP-binding protein
YP_001751211.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: pen:PSEEN0992 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_001751212.1	catalyzes the formation of selenophosphate from selenide and ATP
YP_001751213.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
YP_001751214.1	PFAM: protein of unknown function DUF1311; KEGG: pen:PSEEN0989 hypothetical protein
YP_001751215.1	KEGG: pen:PSEEN0987 hypothetical protein
YP_001751216.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0985 acetyltransferase, GNAT family
YP_001751217.1	KEGG: pen:PSEEN0608 hypothetical protein
YP_001751218.1	KEGG: pen:PSEEN0938 hypothetical protein
YP_001751219.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN0966 hypothetical protein
YP_001751220.1	PFAM: aminotransferase class I and II; KEGG: pen:PSEEN0965 aminotransferase (transaminase)
YP_001751221.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_001751222.1	TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: pen:PSEEN0959 cytochrome o ubiquinol oxidase, subunit IV
YP_001751223.1	TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: pen:PSEEN0958 cytochrome o ubiquinol oxidase subunit III
YP_001751224.1	KEGG: pen:PSEEN0957 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001751225.1	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: pen:PSEEN0956 cytochrome o ubiquinol oxidase subunit II
YP_001751226.1	disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein
YP_001751227.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
YP_001751228.1	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon
YP_001751229.1	KEGG: par:Psyc_1601 hypothetical protein
YP_001751230.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: ses:SARI_00237 hypothetical protein
YP_001751231.1	KEGG: aeh:Mlg_2167 ABC transporter related; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001751232.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: ses:SARI_00235 hypothetical protein
YP_001751233.1	PFAM: response regulator receiver; CheW domain protein; KEGG: pen:PSEEN0950 chemotaxis signal transduction protein CheW-like
YP_001751234.1	KEGG: pen:PSEEN0948 hypothetical protein
YP_001751235.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN0947 hypothetical protein
YP_001751236.1	KEGG: pen:PSEEN5347 hypothetical protein
YP_001751237.1	KEGG: pen:PSEEN0938 hypothetical protein
YP_001751238.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN0945 multidrug RND transporter, membrane fusion protein (HylD family)
YP_001751239.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN0944 multidrug transport protein; acriflavin resistance protein family
YP_001751240.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN0943 DNA-binding heavy metal response regulator
YP_001751241.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN0942 heavy metal sensor histidine kinase
YP_001751242.1	KEGG: pen:PSEEN0941 hypothetical protein
YP_001751243.1	PFAM: outer membrane porin; KEGG: pen:PSEEN0940 porin OprD family
YP_001751244.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN0937 hypothetical protein
YP_001751245.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0936 hypothetical protein
YP_001751246.1	KEGG: pen:PSEEN0935 hypothetical protein
YP_001751247.1	TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS fructose-specific IIB subunit; KEGG: pen:PSEEN0934 phosphotransferase system FruA, fructose-specific IIBC component
YP_001751248.1	KEGG: pen:PSEEN0933 1-phosphofructokinase FruK; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein
YP_001751249.1	TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: pen:PSEEN0932 phosphotransferase system FruB, fructose-specific EI/HPr/EIIA components
YP_001751250.1	binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism
YP_001751251.1	PFAM: TatD-related deoxyribonuclease; KEGG: pen:PSEEN0930 deoxyribonuclease, TatD family (metal-dependent)
YP_001751252.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN0929 methyl-accepting chemotaxis protein
YP_001751253.1	KEGG: pen:PSEEN0928 inner membrane protein AmpE
YP_001751254.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: pen:PSEEN0927 N-acetyl-anhydromuramyl-L-alanine amidase
YP_001751255.1	PFAM: protein of unknown function DUF1631; KEGG: pen:PSEEN0926 hypothetical protein
YP_001751256.1	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide
YP_001751257.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN0924 thioredoxin reductase
YP_001751258.1	putative role in sulfur assimilation
YP_001751259.1	KEGG: pen:PSEEN0922 methyl-accepting chemotaxis transducer/sensory box protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001751260.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN0921 glycosyl transferase, group 1
YP_001751261.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pen:PSEEN0920 FMN-linked oxidoreductase, Oye family
YP_001751262.1	PFAM: glutathione peroxidase; KEGG: pen:PSEEN0919 glutathione peroxidase
YP_001751263.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN0918 peptidyl-prolyl cis-trans isomerase SlyD (FKBP-type)
YP_001751264.1	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate
YP_001751265.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN0915 outer membrane protein, OmpA family
YP_001751266.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN0914 hydrolase; metallo-beta-lactamase family protein
YP_001751267.1	toxin of the ChpB-ChpS toxin-antitoxin system
YP_001751268.1	PFAM: SpoVT/AbrB domain protein; KEGG: psb:Psyr_0889 SpoVT/AbrB-like
YP_001751269.1	PFAM: ATP-binding region ATPase domain protein; KEGG: pen:PSEEN0913 sensor histidine kinase
YP_001751270.1	PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN0912 response regulator/TPR domain protein
YP_001751271.1	PFAM: regulatory protein LuxR; SMART: AAA ATPase; KEGG: pen:PSEEN0911 transcriptional regulator, LuxR family
YP_001751272.1	PFAM: protein of unknown function DUF1329; KEGG: pen:PSEEN0910 hypothetical protein
YP_001751273.1	PFAM: protein of unknown function DUF1302; KEGG: psb:Psyr_0991 protein of unknown function DUF1302
YP_001751274.1	activates fatty acids by binding to coenzyme A
YP_001751275.1	Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor
YP_001751276.1	PFAM: methyltransferase small; Methyltransferase small domain protein; KEGG: pen:PSEEN0906 ribosomal RNA small subunit methyltransferase C
YP_001751277.1	PFAM: protein of unknown function UPF0016; KEGG: pen:PSEEN0905 hypothetical protein
YP_001751278.1	PFAM: peptidase M48 Ste24p; KEGG: pen:PSEEN0904 zinc-dependent peptidase, M48 family
YP_001751279.1	PFAM: protein of unknown function DUF159; KEGG: pen:PSEEN0902 hypothetical protein
YP_001751280.1	KEGG: pen:PSEEN0901 hypothetical protein
YP_001751281.1	KEGG: pen:PSEEN0900 hypothetical protein
YP_001751282.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pen:PSEEN0898 hypothetical protein
YP_001751283.1	KEGG: pen:PSEEN0897 hypothetical protein
YP_001751284.1	KEGG: pen:PSEEN0896 hypothetical protein
YP_001751285.1	KEGG: pen:PSEEN0895 lipoprotein
YP_001751286.1	KEGG: pen:PSEEN0894 hypothetical protein
YP_001751287.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_001751288.1	KEGG: pen:PSEEN0892 hypothetical protein
YP_001751289.1	KEGG: pen:PSEEN0891 hypothetical protein
YP_001751290.1	KEGG: pen:PSEEN0890 hypothetical protein
YP_001751291.1	Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively
YP_001751292.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_001751293.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN0887 uracil permease
YP_001751294.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_001751295.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; domain of unknown function DUF1731; KEGG: pen:PSEEN0885 hypothetical protein
YP_001751296.1	KEGG: pen:PSEEN0884 hypothetical protein
YP_001751297.1	PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: pen:PSEEN0883 hypothetical protein
YP_001751298.1	PFAM: regulatory protein MerR; KEGG: pen:PSEEN0882 transcriptional regulator, MerR family
YP_001751299.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: pen:PSEEN0881 deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding
YP_001751300.1	KEGG: pen:PSEEN0880 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001751301.1	KEGG: pfl:PFL_5155 hypothetical protein
YP_001751302.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_001751303.1	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
YP_001751304.1	TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; Methyltransferase type 11; KEGG: pen:PSEEN0877 methylase of polypeptide chain release factors
YP_001751305.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_001751306.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_001751307.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN0860 hypothetical protein
YP_001751308.1	Incorporates lipoproteins in the outer membrane after they are released by the LolA protein
YP_001751309.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_001751310.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_001751311.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_001751312.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_001751313.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_001751314.1	TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: reu:Reut_A0690 sulphate anion transporter
YP_001751315.1	KEGG: reh:H16_A2415 predicted membrane protein
YP_001751316.1	PFAM: secretion protein HlyD family protein; KEGG: reu:Reut_A1739 secretion protein HlyD
YP_001751317.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reh:H16_A2417 outer membrane heavy metal efflux protein
YP_001751318.1	PFAM: protein of unknown function UPF0118; KEGG: reh:H16_A2418 predicted permease
YP_001751319.1	TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; KEGG: pfo:Pfl_3513 potassium efflux system protein
YP_001751320.1	PFAM: protein of unknown function DUF344; KEGG: pen:PSEEN2681 hypothetical protein
YP_001751321.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN0851 hydrolase; isochorismatase hydrolase family
YP_001751322.1	KEGG: pen:PSEEN0850 hypothetical protein
YP_001751323.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN0849 transporter, NCS1 nucleoside transporter family
YP_001751324.1	PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN0848 betaine-aldehyde dehydrogenase
YP_001751325.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pen:PSEEN0846 ion mechanosensitive channel
YP_001751326.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pen:PSEEN0845 O6-methylguanine-DNA methyltransferase
YP_001751327.1	PFAM: HhH-GPD family protein; KEGG: pen:PSEEN0843 DNA-3-methyladenine glycosylase
YP_001751328.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: neu:NE2486 sigma factor, ECF subfamily
YP_001751329.1	PFAM: FecR protein; KEGG: pae:PA2467 probable transmembrane sensor
YP_001751330.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mms:mma_1159 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
YP_001751331.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0842 major facilitator family transporter
YP_001751332.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0841 fosmidomycin/multidrug transport protein (MFS superfamily)
YP_001751333.1	PFAM: FecR protein; KEGG: pen:PSEEN0840 FecR-like transmembrane sensor
YP_001751334.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN0839 transporter, LysE family
YP_001751335.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0838 transcriptional regulator, LysR family
YP_001751336.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: acb:A1S_1248 hypothetical protein
YP_001751337.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0835 ribosomal-protein-alanine acetyltransferase RimI
YP_001751338.1	KEGG: pen:PSEEN0834 hypothetical protein
YP_001751339.1	KEGG: pen:PSEEN0833 hypothetical protein
YP_001751340.1	KEGG: pen:PSEEN0832 hypothetical protein
YP_001751341.1	KEGG: pen:PSEEN0831 hypothetical protein
YP_001751342.1	PFAM: CreA family protein; KEGG: pfo:Pfl_4856 CreA
YP_001751343.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_001751344.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_001751345.1	involved in the peptidyltransferase reaction during translation
YP_001751346.1	PFAM: ribosomal protein L21; KEGG: pen:PSEEN0825 50S ribosomal subunit protein L21
YP_001751347.1	PFAM: Polyprenyl synthetase; KEGG: pen:PSEEN0824 octaprenyl-diphosphate synthase
YP_001751348.1	TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: pen:PSEEN0823 alkylphosphonate utilization operon protein PhnA
YP_001751349.1	KEGG: pen:PSEEN0822 hypothetical protein
YP_001751350.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN0821 FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase)
YP_001751351.1	KEGG: pen:PSEEN0820 hypothetical protein
YP_001751352.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0819 hypothetical protein
YP_001751353.1	KEGG: pen:PSEEN0818 hypothetical protein
YP_001751354.1	KEGG: pen:PSEEN0817 ATP-dependent protease
YP_001751355.1	KEGG: pen:PSEEN0816 hypothetical protein
YP_001751356.1	KEGG: pen:PSEEN0815 hypothetical protein
YP_001751357.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: pen:PSEEN0813 transcription elongation factor
YP_001751358.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
YP_001751359.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_001751360.1	KEGG: pen:PSEEN0809 hypothetical protein
YP_001751361.1	KEGG: pen:PSEEN0807 sensory box protein(GGDEF domain/EAL domain); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001751362.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001751363.1	PFAM: Bile acid:sodium symporter; KEGG: pen:PSEEN4637 transporter, bile acid/Na+ symporter family
YP_001751364.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5406 drug resistance transporter, Bcr/CflA subfamily
YP_001751365.1	KEGG: bvi:Bcep1808_5407 hypothetical protein
YP_001751366.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bvi:Bcep1808_5408 AMP-dependent synthetase and ligase
YP_001751367.1	KEGG: bvi:Bcep1808_5409 taurine catabolism dioxygenase TauD/TfdA
YP_001751368.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_5410 transcriptional regulator, LysR family
YP_001751369.1	PFAM: regulatory protein MarR; KEGG: zmo:ZMO0054 MarR family transcriptional regulator
YP_001751370.1	PFAM: alpha/beta hydrolase fold; KEGG: zmo:ZMO0053 putative beta-ketoadipate enol-lactone hydrolase
YP_001751371.1	PFAM: major facilitator superfamily MFS_1; KEGG: zmo:ZMO0052 cyanate permease
YP_001751372.1	KEGG: pen:PSEEN4652 hypothetical protein
YP_001751373.1	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: bvi:Bcep1808_6200 plasmid pRiA4b ORF-3 family protein
YP_001751374.1	KEGG: pen:PSEEN2864 transposase, IS256 family
YP_001751375.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: pen:PSEEN1068 4-carboxymuconolactone decarboxylase PcaC
YP_001751376.1	PFAM: outer membrane porin; KEGG: pfo:Pfl_3451 outer membrane porin
YP_001751377.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: dac:Daci_5297 cupin 2 conserved barrel domain protein
YP_001751378.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pde:Pden_4528 helix-turn-helix-domain containing protein, AraC type
YP_001751379.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: azc:AZC_3212 3-hydroxybutyryl-CoA dehydrogenase
YP_001751380.1	PFAM: protein of unknown function DUF849; KEGG: bpt:Bpet3914 hypothetical protein
YP_001751381.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reu:Reut_B4121 general substrate transporter:major facilitator superfamily MFS_1
YP_001751382.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: oan:Oant_3278 resolvase domain protein
YP_001751383.1	KEGG: bpa:BPP1266 hypothetical protein
YP_001751384.1	PFAM: integrase family protein; KEGG: rme:Rmet_2561 phage integrase
YP_001751385.1	PFAM: Fimbrial protein pilin; KEGG: pen:PSEEN4666 type IV pili prepilin PilA
YP_001751386.1	PFAM: type II secretion system protein; KEGG: pen:PSEEN4667 type IV fimbrial assembly protein
YP_001751387.1	PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: pen:PSEEN4668 type IV pili prepilin peptidase PilD/XcpA
YP_001751388.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_001751389.1	PFAM: protein of unknown function DUF329; KEGG: pen:PSEEN4670 hypothetical protein
YP_001751390.1	KEGG: pen:PSEEN4671 hypothetical protein
YP_001751391.1	PFAM: Protein of unknown function DUF1780; KEGG: pen:PSEEN4673 hypothetical protein
YP_001751392.1	KEGG: pen:PSEEN4674 hypothetical protein
YP_001751393.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN4675 NADH dehydrogenase II
YP_001751394.1	KEGG: pen:PSEEN4678 ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001751395.1	PFAM: protein of unknown function DUF152; KEGG: pen:PSEEN4679 hypothetical protein
YP_001751396.1	KEGG: pen:PSEEN4680 23S rRNA pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001751397.1	KEGG: pen:PSEEN4681 competence lipoprotein ComL
YP_001751398.1	KEGG: pen:PSEEN4682 hypothetical protein
YP_001751399.1	TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN4683 oxidoreductase, FAD-binding
YP_001751400.1	KEGG: pen:PSEEN4684 type IV pili biogenesis protein PilE
YP_001751401.1	KEGG: pen:PSEEN4685 hypothetical protein
YP_001751402.1	KEGG: pen:PSEEN4686 hypothetical protein
YP_001751404.1	KEGG: pen:PSEEN4688 type IV pili biogenesis protein FimT
YP_001751405.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_001751406.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN4690 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)
YP_001751407.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001751408.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_001751409.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
YP_001751410.1	TIGRFAM: integral membrane protein MviN; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: pen:PSEEN4694 virulence factor MviN family
YP_001751411.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_001751412.1	PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN4696 paraquat-inducible protein B
YP_001751413.1	PFAM: Paraquat-inducible protein A; KEGG: pen:PSEEN4697 paraquat-inducible protein A
YP_001751414.1	PFAM: Paraquat-inducible protein A; KEGG: pen:PSEEN4698 paraquat-inducible protein A
YP_001751415.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN0682 methylmalonate-semialdehyde dehydrogenase
YP_001751416.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_001751417.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0680 transcriptional regulator, LysR family
YP_001751418.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: pen:PSEEN0679 transcriptional regulator, TetR/AcrR family
YP_001751419.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: pen:PSEEN0678 hypothetical protein
YP_001751420.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN0676 oxidoreductase, short chain dehydrogenase/reductase family
YP_001751421.1	catalyzes the formation of inosine from adenosine
YP_001751422.1	SMART: regulatory protein ArsR; KEGG: pen:PSEEN0673 transcriptional regulator, ArsR family
YP_001751423.1	KEGG: pfl:PFL_0714 hypothetical protein
YP_001751424.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0672 multidrug resistance transporter, Bcr/CflA family
YP_001751425.1	PFAM: Heavy metal transport/detoxification protein; KEGG: pen:PSEEN0671 copper-binding protein
YP_001751426.1	KEGG: pen:PSEEN0670 hypothetical protein
YP_001751427.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: pen:PSEEN0669 copper-translocating P-type ATPase
YP_001751428.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN0668 transcription regulator heavy metal-dependent MerE family
YP_001751429.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN0666 methyl-accepting chemotaxis transducer
YP_001751430.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN0665 transcriptional regulator, AraC family
YP_001751431.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001751432.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001751433.1	PFAM: MaoC domain protein dehydratase; KEGG: pen:PSEEN0662 hypothetical protein
YP_001751434.1	KEGG: pen:PSEEN0661 hypothetical protein
YP_001751435.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN0660 methyltransferase
YP_001751436.1	KEGG: pen:PSEEN0659 lipoprotein
YP_001751437.1	KEGG: pen:PSEEN0658 lipoprotein
YP_001751438.1	PFAM: peptidase A24A prepilin type IV; KEGG: pen:PSEEN0654 prepilin peptidase; typeII/IV secretion
YP_001751439.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pen:PSEEN0653 DNA-binding response regulator, LuxR family
YP_001751440.1	PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: pen:PSEEN0640 hypothetical protein
YP_001751441.1	penicillin-insensitive transglycosylase/transpeptidase
YP_001751442.1	KEGG: pen:PSEEN4843 hypothetical protein
YP_001751443.1	PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: pen:PSEEN4844 hypothetical protein
YP_001751444.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pen:PSEEN4845 DNA-damage-inducible protein F
YP_001751445.1	KEGG: pen:PSEEN4845 DNA-damage-inducible protein F
YP_001751446.1	KEGG: pen:PSEEN4846 hypothetical protein
YP_001751447.1	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis
YP_001751448.1	involved in start site selection during the initiation of translation
YP_001751449.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN4850 IPP isomerase type 1
YP_001751450.1	KEGG: pen:PSEEN4851 hypothetical protein
YP_001751451.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: pen:PSEEN4852 diguanylate cyclase (GGDEF domain)/response regulator
YP_001751452.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN4853 methyl-accepting chemotaxis transducer for inorganic phosphate CtpL
YP_001751453.1	two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm
YP_001751454.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001751455.1	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_001751456.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_001751457.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_001751458.1	TIGRFAM: MJ0042 family finger-like protein; KEGG: pen:PSEEN4860 hypothetical protein
YP_001751459.1	TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: pen:PSEEN4861 dihydrouridine synthase TIM-barrel protein nifR3
YP_001751460.1	Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription
YP_001751461.1	involved in de novo purine biosynthesis
YP_001751462.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_001751463.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: pen:PSEEN4865 sensor histidine kinase/response regulator (hybrid)
YP_001751464.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: pen:PSEEN4866 membrane protein, MarC family
YP_001751465.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: pen:PSEEN4868 precorrin-3B C17-methyltransferase
YP_001751466.1	catalyzes the formation of precorrin-3 from precorrin-2
YP_001751467.1	catalyzes the interconversion of precorrin-8X and hydrogenobyrinate
YP_001751468.1	TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: pen:PSEEN4871 precorrin-3B synthase
YP_001751469.1	KEGG: pen:PSEEN4872 precorrin-6Y C5,15-methyltransferase (decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_001751470.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
YP_001751471.1	CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6
YP_001751472.1	KEGG: pen:PSEEN4875 virulence-assiciated protein MvpT
YP_001751473.1	PFAM: PilT protein domain protein; KEGG: pen:PSEEN4876 nucleic acid binding protein, PIN domain
YP_001751474.1	PFAM: protein of unknown function DUF107; KEGG: pen:PSEEN4877 hypothetical protein
YP_001751475.1	PFAM: band 7 protein; KEGG: pen:PSEEN4878 hypothetical protein
YP_001751476.1	KEGG: pen:PSEEN4879 hypothetical protein
YP_001751477.1	PFAM: protein of unknown function DUF461; KEGG: pen:PSEEN4881 hypothetical protein
YP_001751478.1	KEGG: pen:PSEEN4882 hypothetical protein
YP_001751479.1	TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN4883 outer membrane copper receptor OprC
YP_001751480.1	PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: pen:PSEEN4884 hypothetical protein
YP_001751481.1	involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine
YP_001751482.1	TIGRFAM: urea ABC transporter, urea binding protein; KEGG: pen:PSEEN4888 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001751483.1	TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: pen:PSEEN4889 branched-chain amino acid ABC transporter, permease protein
YP_001751484.1	TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: pen:PSEEN4890 branched-chain amino acid ABC transporter, permease protein
YP_001751485.1	TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: pen:PSEEN4891 branched-chain amino acid transport ABC transporter, ATP-binding component
YP_001751486.1	KEGG: pen:PSEEN4892 branched-chain amino acid ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001751487.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN4893 acetyltransferase, GNAT family
YP_001751488.1	KEGG: pen:PSEEN4895 hypothetical protein
YP_001751489.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: pen:PSEEN4896 curved DNA-binding protein
YP_001751490.1	KEGG: pen:PSEEN4897 heat-shock protein, HSP70 family
YP_001751491.1	KEGG: pen:PSEEN4898 hypothetical protein
YP_001751492.1	PFAM: PsiF repeat protein; KEGG: pst:PSPTO_4900 phosphate starvation-inducible protein PsiF
YP_001751493.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN4900 transcriptional regulator, AraC family
YP_001751494.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4902 hypothetical protein
YP_001751495.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN4903 triacylglycerol lipase
YP_001751496.1	osmotically-inducible lipoprotein E; activator of ntr-like gene protein
YP_001751497.1	PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: pen:PSEEN4905 bacterioferritin
YP_001751498.1	PFAM: AsmA family protein; KEGG: pen:PSEEN4906 hypothetical protein
YP_001751499.1	KEGG: pen:PSEEN4907 hypothetical protein
YP_001751500.1	KEGG: plu:plu2336 hypothetical protein
YP_001751501.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN4908 transcriptional regulator, TetR family
YP_001751502.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: pen:PSEEN4909 mannose-6-phosphate isomerase
YP_001751503.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN4911 oxidoreductase, short chain dehydrogenase/reductase family
YP_001751504.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN4913 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001751505.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN4914 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001751506.1	PFAM: inner-membrane translocator; KEGG: pen:PSEEN4915 branched-chain amino acid ABC transporter, permease protein
YP_001751507.1	PFAM: inner-membrane translocator; KEGG: pfo:Pfl_0553 inner-membrane translocator
YP_001751508.1	PFAM: Extracellular ligand-binding receptor; KEGG: pen:PSEEN4917 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001751509.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_001751510.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_001751511.1	TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein; KEGG: pen:PSEEN4921 azurin
YP_001751512.1	PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pen:PSEEN4925 Fe-S oxidase, SAM-binding
YP_001751513.1	unwinds double stranded DNA
YP_001751514.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_001751515.1	KEGG: pen:PSEEN4928 hypothetical protein
YP_001751516.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_001751517.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_001751518.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: pen:PSEEN4932 RNA methyltransferase, TrmH family, group 3
YP_001751519.1	KEGG: pen:PSEEN4933 exoribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein
YP_001751520.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN4935 iron ABC transporter, periplasmic iron-binding protein
YP_001751521.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN4936 iron ABC transporter, permease protein
YP_001751522.1	KEGG: sbn:Sbal195_0134 hypothetical protein
YP_001751523.1	KEGG: psp:PSPPH_1886 hypothetical protein
YP_001751525.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN4937 methyl-accepting chemotaxis transducer
YP_001751526.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_001751527.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
YP_001751528.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: pen:PSEEN4940 HflC protein
YP_001751529.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: pen:PSEEN4941 HflK protein
YP_001751530.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: pen:PSEEN4942 hypothetical protein
YP_001751531.1	Stimulates the elongation of poly(A) tails
YP_001751532.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_001751533.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YP_001751534.1	PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: pen:PSEEN4946 N-acetylmuramoyl-L-alanine amidase
YP_001751535.1	PFAM: protein of unknown function UPF0079; KEGG: pen:PSEEN4947 hypothetical protein
YP_001751536.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; KEGG: pen:PSEEN4948 hypothetical protein
YP_001751537.1	TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: pfo:Pfl_0517 4Fe-4S cluster binding
YP_001751538.1	PFAM: protein of unknown function UPF0126; KEGG: pen:PSEEN4953 hypothetical protein
YP_001751539.1	3'-5' exoribonuclease specific for small oligoribonuclotides
YP_001751540.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
YP_001751541.1	KEGG: pen:PSEEN4956 hypothetical protein
YP_001751542.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_001751543.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_001751544.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN4959 hypothetical protein
YP_001751545.1	PFAM: Rhodanese domain protein; KEGG: pen:PSEEN4960 thiosulfate sulfurtransferase (rhodanese-like protein)
YP_001751546.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_001751547.1	KEGG: pen:PSEEN4962 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase type 3
YP_001751548.1	KEGG: pen:PSEEN4963 hypothetical protein
YP_001751549.1	PFAM: protein of unknown function DUF330; KEGG: pen:PSEEN4964 hypothetical protein
YP_001751550.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001751551.1	KEGG: pen:PSEEN4967 hypothetical protein
YP_001751552.1	KEGG: pen:PSEEN4968 hypothetical protein
YP_001751553.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001751554.1	PFAM: protein of unknown function UPF0227; KEGG: pen:PSEEN4970 hypothetical protein
YP_001751555.1	PFAM: metallophosphoesterase; Calcineurin phosphoesterase domain protein; KEGG: pen:PSEEN4971 metallo-phosphoesterase
YP_001751556.1	PFAM: protein of unknown function DUF1249; KEGG: pen:PSEEN4972 hypothetical protein
YP_001751557.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN4973 hydrolase, MutT/NUDIX family
YP_001751558.1	KEGG: pen:PSEEN4975 lipoprotein
YP_001751559.1	TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN4976 transporter, NCS1 nucleoside transporter family
YP_001751560.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_001751561.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN4979 type I efflux secretion system outer membrane protein, TolC
YP_001751562.1	PFAM: protein of unknown function DUF336; KEGG: spe:Spro_2446 protein of unknown function DUF336
YP_001751563.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
YP_001751564.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0520 transporter, MFS superfamily
YP_001751565.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
YP_001751566.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: pen:PSEEN0518 bacterioferritin
YP_001751567.1	PFAM: Catalase domain protein; KEGG: pen:PSEEN0517 catalase (hydroperoxidase II)KatA
YP_001751568.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_001751569.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001751570.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_001751571.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_001751572.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_001751573.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_001751574.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_001751575.1	late assembly protein
YP_001751576.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_001751577.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_001751578.1	binds 5S rRNA along with protein L5 and L25
YP_001751579.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_001751580.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_001751581.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_001751582.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_001751583.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_001751584.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_001751585.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_001751586.1	one of the stabilizing components for the large ribosomal subunit
YP_001751587.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_001751588.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_001751589.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_001751590.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_001751591.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_001751592.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_001751593.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_001751594.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_001751595.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_001751596.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001751597.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001751598.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_001751599.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_001751600.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_001751601.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_001751602.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_001751603.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_001751604.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_001751605.1	binds directly to 23S ribosomal RNA
YP_001751606.1	Modulates Rho-dependent transcription termination
YP_001751607.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_001751608.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001751609.1	KEGG: pen:PSEEN0473 hypothetical protein
YP_001751610.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
YP_001751611.1	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon
YP_001751612.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_001751613.1	PFAM: peptidase M23B; Opacity-associated protein A; Opacity-associated protein A domain protein; KEGG: pen:PSEEN0463 peptidase, M23/M37 family
YP_001751614.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_001751615.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
YP_001751616.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
YP_001751617.1	PFAM: conserved hypothetical protein; KEGG: pfo:Pfl_5103 hypothetical protein
YP_001751618.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: pen:PSEEN0458 dioxygenases related to 2-nitropropane dioxygenase
YP_001751619.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN0457 oxidoreductase, short chain dehydrogenase/reductase family
YP_001751620.1	PFAM: histidine triad (HIT) protein; KEGG: psb:Psyr_4573 histidine triad (HIT) protein
YP_001751621.1	KEGG: pen:PSEEN0455 ubiquinone biosynthesis protein COQ7
YP_001751622.1	KEGG: pen:PSEEN0454 hypothetical protein
YP_001751623.1	PFAM: OsmC family protein; KEGG: pen:PSEEN0452 hypothetical protein
YP_001751624.1	complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons
YP_001751625.1	KEGG: pen:PSEEN0450 hypothetical protein
YP_001751626.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_001751627.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001751628.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
YP_001751629.1	KEGG: pen:PSEEN0445 esterase EstA precursor; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: lipolytic protein G-D-S-L family; Autotransporter beta- domain protein
YP_001751630.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
YP_001751631.1	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate
YP_001751632.1	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate
YP_001751633.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0441 polyamine ABC transporter, permease protein
YP_001751634.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0440 polyamine ABC transporter, permease protein
YP_001751635.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN0439 polyamine ABC transporter, periplasmic polyamine-binding protein
YP_001751636.1	KEGG: pen:PSEEN0438 polyamine ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001751637.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN0437 DNA-binding response regulator, LuxR family
YP_001751638.1	KEGG: pen:PSEEN0436 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3
YP_001751639.1	KEGG: pen:PSEEN0435 hypothetical protein
YP_001751640.1	PFAM: heat shock protein DnaJ domain protein; KEGG: pen:PSEEN0434 DnaJ-like co-chaperone
YP_001751641.1	PFAM: Nucleotidyl transferase; KEGG: pen:PSEEN0433 nucleotidyltransferase
YP_001751642.1	PFAM: aminoglycoside phosphotransferase; KEGG: pen:PSEEN0432 phosphotransferase
YP_001751643.1	PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: pen:PSEEN0431 organic solvent tolerance protein precursor OstA
YP_001751644.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: pen:PSEEN0430 peptidyl-prolyl cis-trans isomerase A
YP_001751645.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_001751646.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_001751647.1	protein associated with Co2+ and Mg2+ efflux
YP_001751648.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
YP_001751649.1	belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine
YP_001751650.1	PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: pen:PSEEN0424 serine protein kinase
YP_001751651.1	PFAM: protein of unknown function DUF444; KEGG: pen:PSEEN0423 hypothetical protein
YP_001751652.1	PFAM: SpoVR family protein; KEGG: pen:PSEEN0422 hypothetical protein
YP_001751653.1	catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases
YP_001751654.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: pen:PSEEN0420 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_001751655.1	TIGRFAM: dihydroneopterin aldolase; KEGG: pen:PSEEN0419 dihydroneopterin aldolase
YP_001751656.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
YP_001751657.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_001751658.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_001751659.1	synthesizes RNA primers at the replication forks
YP_001751660.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
YP_001751661.1	KEGG: pen:PSEEN0412 sensory box proten ; GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; extracellular solute-binding protein family 3; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001751662.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: pau:PA14_07450 hypothetical protein
YP_001751663.1	KEGG: plu:plu2021 hypothetical protein
YP_001751664.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN0407 transcriptional regulator, AsnC family
YP_001751665.1	PFAM: amine oxidase; KEGG: pen:PSEEN0401 amino oxydase
YP_001751666.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN0400 amidohydrolase, carbon-nitrogen family
YP_001751667.1	TIGRFAM: coenzyme PQQ biosynthesis protein PqqF; PFAM: peptidase M16 domain protein; KEGG: pen:PSEEN0399 coenzyme PQQ synthesis protein F
YP_001751668.1	Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme
YP_001751669.1	possibly involved in transport of pyrroloquinoline quinone transport
YP_001751670.1	Required in the synthesis of PPQ, but its exact function is unknown
YP_001751671.1	with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone
YP_001751672.1	KEGG: pen:PSEEN0394 coenzyme PQQ synthesis protein E (coenzyme PQQ synthesis protein III); TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001751673.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: pen:PSEEN0393 prolyl oligopeptidase
YP_001751674.1	PFAM: protein of unknown function UPF0057; KEGG: pen:PSEEN5109 hypothetical protein
YP_001751675.1	PFAM: aminotransferase class-III; KEGG: pen:PSEEN5110 acetylornithine aminotransferase
YP_001751676.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5111 transcriptional regulator, LysR family
YP_001751677.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN5113 acyl-CoA dehydrogenase
YP_001751678.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN5114 diguanylate cyclase (GGDEF domain)
YP_001751679.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pen:PSEEN5115 acyl-CoA dehydrogenase
YP_001751680.1	KEGG: pen:PSEEN5116 hypothetical protein
YP_001751681.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
YP_001751682.1	TIGRFAM: biotin biosynthesis protein BioC; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN5118 biotin biosynthesis protein BioC
YP_001751683.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN5119 biotin biosynthesis BioH
YP_001751684.1	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine
YP_001751685.1	KEGG: pen:PSEEN5121 biotin synthetase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_001751686.1	KEGG: pen:PSEEN5122 competence protein ComF
YP_001751687.1	TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: pen:PSEEN5123 molybdate transport regulator ModE
YP_001751688.1	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages
YP_001751689.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN5125 RarD protein
YP_001751690.1	PFAM: amino acid-binding ACT domain protein; KEGG: pen:PSEEN5126 hypothetical protein
YP_001751691.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_001751692.1	PFAM: response regulator receiver; KEGG: pen:PSEEN5128 response regulator
YP_001751693.1	PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: pen:PSEEN5129 nucleotidyltransferase, CBS domain/cAMP binding
YP_001751694.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: pen:PSEEN5130 exonuclease
YP_001751695.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in P. aeruginosa this sigma factor regulates the production of the ferrichrome outer membrane receptor FiuA.
YP_001751696.1	PFAM: FecR protein; KEGG: pen:PSEEN5132 FecR-like transmembrane sensor
YP_001751697.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN5134 TonB-dependent siderophore receptor
YP_001751698.1	PFAM: PepSY-associated TM helix domain protein; KEGG: pen:PSEEN5135 hypothetical protein
YP_001751699.1	KEGG: pen:PSEEN5136 hypothetical protein
YP_001751700.1	KEGG: psb:Psyr_0413 hypothetical protein
YP_001751701.1	KEGG: pen:PSEEN5137 hypothetical protein
YP_001751702.1	PFAM: lipopolysaccharide kinase; KEGG: pen:PSEEN5138 heptose kinase WapQ
YP_001751703.1	PFAM: lipopolysaccharide kinase; KEGG: pen:PSEEN5139 heptose kinase WapP
YP_001751704.1	PFAM: lipopolysaccharide kinase; KEGG: pen:PSEEN5140 lipopolysaccharide core biosynthesis; kinase for core heptose of lipopolysaccharide
YP_001751705.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN5141 glucosyltransferase I
YP_001751706.1	TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: pen:PSEEN5142 ADP-heptose; LPS heptosyl transferase I
YP_001751707.1	TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: pen:PSEEN5143 ADP-heptose; LPS heptosyltransferase II
YP_001751708.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
YP_001751709.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_001751710.1	KEGG: pen:PSEEN5146 dihydrolipoamide S-acetyltransferase, E2 component of the pyruvate dehydrogenase complex; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein
YP_001751711.1	KEGG: pen:PSEEN5147 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001751712.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
YP_001751713.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN5149 glutathione S-transferase
YP_001751714.1	PFAM: Inner membrane CreD family protein; KEGG: pen:PSEEN5150 tolerance to colicin E2
YP_001751715.1	part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation
YP_001751716.1	response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation
YP_001751717.1	PFAM: protein of unknown function DUF785; KEGG: pen:PSEEN5153 hypothetical protein
YP_001751718.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pen:PSEEN5154 acyltransferase
YP_001751719.1	KEGG: pen:PSEEN5155 hypothetical protein
YP_001751720.1	KEGG: pen:PSEEN5347 hypothetical protein
YP_001751722.1	KEGG: psb:Psyr_4870 hypothetical protein
YP_001751723.1	KEGG: pst:PSPTO_5312 hypothetical protein
YP_001751724.1	TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN5156 formaldehyde dehydrogenase, glutathione-independent
YP_001751725.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_001751726.1	TIGRFAM: sarcosine oxidase, gamma subunit family; PFAM: Sarcosine oxidase gamma subunit; KEGG: pen:PSEEN5158 sarcosine oxidase, gamma subunit
YP_001751727.1	TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN5159 sarcosine oxidase (alpha subunit) oxidoreductase protein
YP_001751728.1	TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: pen:PSEEN5160 sarcosine oxidase, delta subunit
YP_001751729.1	TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN5161 sarcosine oxidase beta subunit
YP_001751730.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001751731.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pen:PSEEN5163 low-specificity L-threonine aldolase
YP_001751732.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5164 methyl-accepting chemotaxis transducer
YP_001751733.1	PFAM: protein of unknown function DUF710; KEGG: pen:PSEEN5165 hypothetical protein
YP_001751734.1	KEGG: pen:PSEEN5166 hypothetical protein
YP_001751735.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5167 methyl-accepting chemotaxis transducer
YP_001751736.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN5168 oxidoreductase, FAD-binding
YP_001751737.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pen:PSEEN5169 iron-sulfur cluster-binding protein, Rieske family
YP_001751738.1	KEGG: psb:Psyr_4870 hypothetical protein
YP_001751739.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: pen:PSEEN5173 electron transfer flavoprotein, beta subunit
YP_001751740.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: pen:PSEEN5174 electron transfer flavoprotein, alpha subunit
YP_001751741.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pen:PSEEN5175 iron-sulfur cluster-binding protein
YP_001751742.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: pen:PSEEN5176 oxidoreductase, FMN-binding
YP_001751743.1	KEGG: pen:PSEEN5177 hypothetical protein
YP_001751744.1	PFAM: peptidase M19 renal dipeptidase; KEGG: pen:PSEEN5178 dipeptidase
YP_001751745.1	PFAM: protein of unknown function DUF1311; KEGG: pen:PSEEN5179 hypothetical protein
YP_001751746.1	KEGG: psb:Psyr_4413 hypothetical protein
YP_001751748.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pen:PSEEN5180 transcriptional regulator, AraC family
YP_001751749.1	TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN5181 substrate-binding region of ABC-type glycine transport system
YP_001751750.1	PFAM: protein of unknown function DUF849; KEGG: pen:PSEEN5182 hypothetical protein
YP_001751751.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_001751752.1	KEGG: pen:PSEEN5184 hypothetical protein
YP_001751753.1	KEGG: xac:XAC1034 peptidyl-Asp metalloendopeptidase
YP_001751754.1	KEGG: pen:PSEEN5185 hypothetical protein
YP_001751755.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pen:PSEEN5186 transcriptional regulator, AraC family
YP_001751756.1	KEGG: pen:PSEEN5187 L-serine deaminase I; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_001751757.1	TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN5188 glycine betaine/L-proline ABC transporter, periplasmic binding protein
YP_001751758.1	TIGRFAM: choline ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5189 glycine betaine/L-proline ABC transporter, permease protein
YP_001751759.1	KEGG: pen:PSEEN5190 glycine betaine/L-proline ABC transporter, ATP-binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; choline ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001751760.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_001751761.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_001751762.1	KEGG: pen:PSEEN5193 hypothetical protein
YP_001751763.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_001751764.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_001751765.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN5196 permease, MFS superfamily
YP_001751766.1	PFAM: AsmA family protein; KEGG: pen:PSEEN5198 AsmA protein
YP_001751767.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: pen:PSEEN5199 A/G specific adenine glycosylase
YP_001751768.1	PFAM: Fe(II) trafficking protein YggX; KEGG: pfo:Pfl_0319 hypothetical protein
YP_001751769.1	PFAM: protein of unknown function DUF344; KEGG: pen:PSEEN5203 polyphosphate kinase 2
YP_001751770.1	KEGG: pen:PSEEN5204 hypothetical protein
YP_001751771.1	TIGRFAM: GABA permease; PFAM: Spore germination protein; amino acid permease-associated region; KEGG: pen:PSEEN5205 gamma-aminobutyrate transporter
YP_001751772.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN5207 amino acid ABC transporter, ATP-binding protein
YP_001751773.1	PFAM: extracellular solute-binding protein family 3; KEGG: pfl:PFL_0342 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001751774.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5209 amino acid ABC transporter, permease protein
YP_001751775.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5210 amino acid ABC transporter, permease protein
YP_001751776.1	KEGG: pen:PSEEN5211 hypothetical protein
YP_001751777.1	KEGG: pen:PSEEN0939 hypothetical protein
YP_001751779.1	KEGG: pen:PSEEN5218 hypothetical protein
YP_001751780.1	PFAM: integrase family protein; KEGG: pfo:Pfl_3064 phage integrase
YP_001751781.1	KEGG: pfo:Pfl_0746 phage integrase
YP_001751782.1	KEGG: reh:H16_A3231 hypothetical protein, contains NB-ARC domain
YP_001751783.1	PFAM: helix-turn-helix domain protein; KEGG: spe:Spro_1852 transcriptional regulator, XRE family
YP_001751784.1	PFAM: ferredoxin-dependent glutamate synthase; KEGG: pen:PSEEN0265 glutamate synthase, large subunit
YP_001751785.1	PFAM: outer membrane porin; KEGG: pen:PSEEN0264 outer membrane protein OprE3
YP_001751786.1	KEGG: pfo:Pfl_0292 hypothetical protein
YP_001751787.1	catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis
YP_001751788.1	PFAM: aminoglycoside phosphotransferase; aminotransferase class-III; KEGG: pen:PSEEN0260 aminotransferase, class III
YP_001751789.1	KEGG: pen:PSEEN0251 dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_001751790.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: pen:PSEEN0250 dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase)
YP_001751791.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN0249 sensor histidine kinase
YP_001751792.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN0248 sigma-54 dependent response regulator
YP_001751793.1	TIGRFAM: thioesterase domain protein; PFAM: Thioesterase putative; KEGG: pen:PSEEN0247 hypothetical protein
YP_001751794.1	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: pen:PSEEN0246 3'(2'),5'-bisphosphate nucleotidase
YP_001751795.1	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose
YP_001751796.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN0244 hydrolase, haloacid dehalogenase family, subfamily IA, variant 3
YP_001751797.1	PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: pen:PSEEN0243 hypothetical protein
YP_001751798.1	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: pen:PSEEN0241 formate dehydrogenase accessory protein FdhD
YP_001751799.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pen:PSEEN0240 molybdopterin oxidoreductase, alpha subunit
YP_001751800.1	PFAM: 17 kDa surface antigen; KEGG: pen:PSEEN0239 hypothetical protein
YP_001751801.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN0236 thioesterase
YP_001751802.1	KEGG: plu:plu2211 hypothetical protein
YP_001751803.1	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: plu:plu2210 hypothetical protein
YP_001751804.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_001751805.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_001751806.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: pen:PSEEN0232 hypothetical protein
YP_001751807.1	PFAM: RNA-binding S4 domain protein; KEGG: pen:PSEEN0231 heat shock protein 15, ribosome associated
YP_001751808.1	PFAM: protein of unknown function DUF785; KEGG: pen:PSEEN0230 hypothetical protein
YP_001751809.1	TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: pen:PSEEN0229 ribosomal protein S6 modification protein
YP_001751810.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN0228 osmolarity sensor protein EnvZ
YP_001751811.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation
YP_001751812.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: pen:PSEEN0226 RNA-binding transcription accessory protein
YP_001751813.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN0225 thioesterase
YP_001751814.1	involved in the first step of glutathione biosynthesis
YP_001751815.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN0223 transcriptional regulator, TetR family
YP_001751816.1	PFAM: TOBE domain protein; KEGG: pen:PSEEN0222 organosulfonate utilization protein SsuF
YP_001751817.1	part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease
YP_001751818.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0220 sulfonate ABC transporter, permease protein SsuC
YP_001751819.1	catalyzes the release of sulfite from alkanesulfonates
YP_001751820.1	KEGG: pen:PSEEN0218 sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001751821.1	PFAM: NADPH-dependent FMN reductase; KEGG: pen:PSEEN0217 NAD(P)H-dependent FMN reductase
YP_001751822.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN0215 thiol-specific antioxidant protein LsfA
YP_001751823.1	PFAM: outer membrane porin; KEGG: pen:PSEEN0214 outer membrane porin OprE
YP_001751824.1	KEGG: pen:PSEEN0213 taurine ABC transporter, periplasmic taurine-binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3
YP_001751825.1	Part of the ABC transporter complex tauABC involved in taurine import
YP_001751826.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0211 taurine ABC transporter, permease protein
YP_001751827.1	catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers
YP_001751828.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: pen:PSEEN0209 choline/glycine betaine transporter, BCCT family
YP_001751829.1	KEGG: pen:PSEEN0208 serine O-acetyltransferase
YP_001751830.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pen:PSEEN0207 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001751831.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0206 amino acid ABC transporter, permease protein
YP_001751832.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0205 amino acid ABC transporter, ATP-binding protein
YP_001751833.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN0203 acyl-CoA dehydrogenase
YP_001751834.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN0202 acyl-CoA dehydrogenase
YP_001751835.1	KEGG: pen:PSEEN0201 monooxygenase
YP_001751836.1	PFAM: NLPA lipoprotein; KEGG: pen:PSEEN0200 D-methionine-binding periplasmic lipoprotein MetQ
YP_001751837.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0199 D-methionine ABC transporter MetN, ATP-binding protein
YP_001751838.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0198 D-methionine ABC transporter, permease protein
YP_001751839.1	KEGG: pen:PSEEN0197 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001751840.1	PFAM: fatty acid desaturase; KEGG: pen:PSEEN0196 fatty acid desaturase
YP_001751841.1	KEGG: pen:PSEEN0195 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001751842.1	PFAM: response regulator receiver; Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN0192 response regulator
YP_001751843.1	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate
YP_001751844.1	catalyzes the formation of succinate from succinate semialdehyde; NADP dependent
YP_001751845.1	PFAM: Arylsulfotransferase; KEGG: pen:PSEEN0187 arylsulfotransferase
YP_001751846.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN0186 TonB-dependent receptor
YP_001751847.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0184 transcritpional regulator, LysR family
YP_001751848.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pen:PSEEN0183 alkylsulfatase AtsK
YP_001751849.1	PFAM: NMT1/THI5 like domain protein; KEGG: pen:PSEEN0182 aryl sulfate ester ABC transporter AstR, periplasmic binding protein
YP_001751850.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0181 alkyl sulfate ester ABC transporter AstB, permease protein
YP_001751851.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0180 alkyl sulfate ester ABC transporter AstC, ATP-binding protein
YP_001751852.1	KEGG: pen:PSEEN0178 hypothetical protein
YP_001751853.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: pen:PSEEN0177 hypothetical protein
YP_001751854.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA2294 putative sulfonate transport system ATP-binding protein
YP_001751855.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_3160 binding-protein-dependent transport systems inner membrane component
YP_001751856.1	KEGG: pae:PA2296 putative sulfonate transport system substrate-binding protein
YP_001751857.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pen:PSEEN0176 ferredoxin, 4Fe-4S
YP_001751858.1	PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN0175 succinate dehydrogenase (fumarate reductase)
YP_001751859.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pen:PSEEN0174 transcriptional regulator, GntR family
YP_001751860.1	PFAM: type II secretion system protein E; KEGG: pen:PSEEN5305 type II secretion system protein E
YP_001751861.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN5306 hypothetical protein
YP_001751862.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_001751863.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_001751864.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_001751865.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5310 iron ABC transporter, permease protein
YP_001751866.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5311 iron ABC transporter, periplasmic iron-binding protein
YP_001751867.1	catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
YP_001751868.1	KEGG: pen:PSEEN5313 hypothetical protein
YP_001751869.1	Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone
YP_001751870.1	PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: pen:PSEEN5315 aminopeptidase P
YP_001751871.1	the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown
YP_001751872.1	KEGG: pen:PSEEN5317 hypothetical protein
YP_001751873.1	PFAM: protein of unknown function DUF710; KEGG: pen:PSEEN5318 hypothetical protein
YP_001751874.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: pen:PSEEN5319 5-formyltetrahydrofolate cyclo-ligase
YP_001751875.1	KEGG: pen:PSEEN5320 hypothetical protein
YP_001751876.1	PFAM: protein of unknown function DUF55; KEGG: pen:PSEEN5321 hypothetical protein
YP_001751877.1	PFAM: flagellar basal body-associated protein FliL; KEGG: pen:PSEEN5325 flagellar basal body-associated protein FliL
YP_001751878.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN5326 alcohol dehydrogenase, zinc-containing
YP_001751879.1	PFAM: ChaC family protein; KEGG: pen:PSEEN5327 transporter, ChaC-related
YP_001751880.1	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose
YP_001751881.1	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: pen:PSEEN5330 3-octaprenyl-4-hydroxybenzoate decarboxylase
YP_001751882.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_001751883.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pst:PSPTO_5243 thioredoxin
YP_001751884.1	PFAM: Ppx/GppA phosphatase; KEGG: pen:PSEEN5335 exopolyphosphatase (ExopolyPase) (metaphosphatase)
YP_001751885.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_001751886.1	KEGG: pen:PSEEN5338 hypothetical protein
YP_001751887.1	PFAM: fatty acid hydroxylase; KEGG: pen:PSEEN5339 hypothetical protein
YP_001751888.1	PFAM: ThiJ/PfpI domain protein; KEGG: pen:PSEEN5340 enhancing lycopene biosynthesis protein 2
YP_001751889.1	PFAM: protein of unknown function DUF188; KEGG: pen:PSEEN5341 hypothetical protein
YP_001751890.1	KEGG: pen:PSEEN5347 hypothetical protein
YP_001751891.1	KEGG: pen:PSEEN5348 hypothetical protein
YP_001751892.1	PFAM: protein of unknown function DUF1568; KEGG: pen:PSEEN4846 hypothetical protein
YP_001751893.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN0156 efflux transporter, outer membrane protein
YP_001751894.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN0155 efflux transporter, membrane fusion protein
YP_001751895.1	PFAM: protein of unknown function DUF1656; KEGG: pen:PSEEN0154 hypothetical protein
YP_001751896.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: pen:PSEEN0153 efflux transporter, permease protein
YP_001751897.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN0152 transcriptional activator, MarR family
YP_001751898.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN0151 hypothetical protein
YP_001751899.1	KEGG: pen:PSEEN0150 transcriptional factor-related protein
YP_001751900.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0149 ABC transporter, permease protein
YP_001751901.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0148 ABC transporter, ATP-binding protein
YP_001751902.1	KEGG: pen:PSEEN0147 ABC transporter, periplasmic binding protein
YP_001751903.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pen:PSEEN0146 taurine catabolic dioxygenase
YP_001751904.1	KEGG: pen:PSEEN0140 hypothetical protein
YP_001751905.1	PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; Na-Ca exchanger/integrin-beta4; KEGG: pfo:Pfl_0133 von Willebrand factor, type A
YP_001751906.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN0143 type I toxin efflux outer membrane protein TolC
YP_001751907.1	KEGG: pen:PSEEN0144 type I toxin efflux ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001751908.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN0145 type I toxin efflux membrane fusion protein
YP_001751909.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: pen:PSEEN0139 signal transduction protein; GGDEF/EAL domain
YP_001751910.1	KEGG: pen:PSEEN0138 hypothetical protein
YP_001751911.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN0137 transcriptional regulator, GntR family
YP_001751912.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pen:PSEEN0121 L-carnitine dehydratase/bile acid-inducible protein F
YP_001751913.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN0120 glutaryl-CoA dehydrogenase
YP_001751914.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0118 transcriptional regulator, LysR family
YP_001751915.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: pen:PSEEN0116 proton-translocating NAD(P) transhydrogenase
YP_001751916.1	KEGG: pen:PSEEN0115 pyridine proton-translocating NAD(P) transhydrogenase
YP_001751917.1	PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pen:PSEEN0114 pyridine nucleotide transhydrogenase, beta subunit
YP_001751918.1	KEGG: pen:PSEEN0113 acetyl-CoA hydrolase/transferase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase
YP_001751919.1	KEGG: pen:PSEEN0112 hypothetical protein
YP_001751920.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0111 hypothetical protein
YP_001751921.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0110 hypothetical protein
YP_001751922.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0108 hypothetical protein
YP_001751923.1	KEGG: pen:PSEEN0107 hypothetical protein
YP_001751924.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pen:PSEEN0106 hypothetical protein
YP_001751925.1	TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pen:PSEEN0104 citrate transporter
YP_001751926.1	PFAM: Integral membrane protein TerC; KEGG: pen:PSEEN0103 efflux transporter, TerC family
YP_001751927.1	TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: pen:PSEEN0101 Na+/Pi cotransporter
YP_001751928.1	PFAM: peptidase M16 domain protein; KEGG: pen:PSEEN0100 metalloprotease, M16 family
YP_001751929.1	KEGG: pen:PSEEN0099 hypothetical protein
YP_001751930.1	PFAM: protein of unknown function DUF140; KEGG: pen:PSEEN0098 ABC transporter, permease protein
YP_001751931.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0097 ABC transporter, ATP-binding protein
YP_001751932.1	PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN0096 hypothetical protein
YP_001751933.1	PFAM: protein of unknown function DUF330; KEGG: pen:PSEEN0095 lipoprotein
YP_001751934.1	PFAM: nucleoside recognition domain protein; KEGG: pen:PSEEN0094 hypothetical protein
YP_001751935.1	carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system
YP_001751936.1	PFAM: Inhibitor of vertebrate lysozyme; KEGG: pen:PSEEN0091 hypothetical protein
YP_001751937.1	PFAM: protein of unknown function DUF1328; KEGG: pen:PSEEN0090 hypothetical protein
YP_001751938.1	KEGG: pen:PSEEN0089 hypothetical protein
YP_001751939.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: psp:PSPPH_0251 osmotically inducible protein, putative
YP_001751940.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN0087 alginate biosynthesis response regulator AlgB
YP_001751941.1	KEGG: pen:PSEEN0086 alginate biosynthesis sensor protein KinB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001751942.1	PFAM: EAL domain protein; KEGG: pen:PSEEN0085 signal transduction protein; EAL domain protein
YP_001751943.1	PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: pen:PSEEN0084 N-acetylmuramoyl-L-alanine amidase
YP_001751944.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN0083 diguanylate cyclase (GGDEF domain protein)
YP_001751945.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pen:PSEEN0082 DNAse I-like hydrolase
YP_001751946.1	PFAM: DSBA oxidoreductase; KEGG: pen:PSEEN0081 thiol:disulfide interchange protein, periplasmic, alkali-inducible
YP_001751947.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN0080 cytochrome c4
YP_001751948.1	KEGG: pen:PSEEN0079 cytochrome c-type protein
YP_001751949.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_001751950.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
YP_001751951.1	KEGG: pen:PSEEN0075 hypothetical protein
YP_001751952.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
YP_001751953.1	PFAM: periplasmic solute binding protein; KEGG: pen:PSEEN0073 zinc ABC transporter ZnuA, periplasmic binding protein
YP_001751954.1	KEGG: pen:PSEEN0072 transcriptional repressor of Zn transport system Zur
YP_001751955.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0071 zinc ABC transporter, ATP-binding protein
YP_001751956.1	PFAM: ABC-3 protein; KEGG: pen:PSEEN0070 zinc ABC transporter, permease protein
YP_001751957.1	KEGG: pen:PSEEN0069 lipoprotein
YP_001751958.1	Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide
YP_001751959.1	part of the metNIQ transport system for methionine
YP_001751960.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0067 D-methionine ABC transporter MetI, membrane protein
YP_001751961.1	PFAM: NLPA lipoprotein; KEGG: pen:PSEEN0066 D-methionine-binding lipoprotein MetQ
YP_001751962.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN5491 transcriptional regulator, GntR family
YP_001751963.1	PFAM: Negative transcriptional regulator; KEGG: pen:PSEEN5492 transcriptional regulator
YP_001751964.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN5493 acetyltransferase, GNAT family
YP_001751965.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN5494 acetyltransferase, GNAT family
YP_001751966.1	PFAM: homocysteine S-methyltransferase; KEGG: psb:Psyr_0975 homocysteine S-methyltransferase
YP_001751967.1	PFAM: extracellular solute-binding protein family 3; KEGG: psp:PSPPH_1023 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001751968.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_1022 amino acid ABC transporter, permease protein
YP_001751969.1	catalyzes the formation of oxaloacetate from pyruvate
YP_001751970.1	biotin carboxylase; with subunit B, the carboxyltansferase/biotincarboxyl carrier subunit catalyzes the formation of oxaloacetate from pyruvate
YP_001751971.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5497 transcriptional regulator, LysR family
YP_001751972.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pen:PSEEN5499 transcriptional regulator, RpiR family
YP_001751973.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001751975.1	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.
YP_001751976.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: pen:PSEEN5505 hypothetical protein
YP_001751977.1	KEGG: pfo:Pfl_5647 hypothetical protein
YP_001751978.1	PFAM: sodium/hydrogen exchanger; KEGG: pen:PSEEN5507 sodium/proton antiporter
YP_001751979.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN5508 long-chain acyl-CoA thioester hydrolase family protein
YP_001751980.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
YP_001751981.1	KEGG: pen:PSEEN5510 hypothetical protein
YP_001751982.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pen:PSEEN5511 cobalamin synthesis protein, P47K family
YP_001751983.1	PFAM: Protein of unknown function DUF1826; KEGG: pen:PSEEN5512 hypothetical protein
YP_001751984.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pen:PSEEN5513 cobalamin synthesis protein/P47K family protein
YP_001751985.1	KEGG: pen:PSEEN5514 hypothetical protein
YP_001751986.1	similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis
YP_001751987.1	KEGG: pen:PSEEN5516 hypothetical protein
YP_001751988.1	catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol)
YP_001751989.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN5518 cyclopropane-fatty-acyl-phospholipid synthase
YP_001751990.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001751991.1	PFAM: regulatory protein ArsR; KEGG: psa:PST_2096 arsenic resistance transcriptional regulator
YP_001751992.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pfl:PFL_2184 arsenate reductase
YP_001751993.1	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: sal:Sala_2405 arsenical-resistance protein
YP_001751994.1	TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: pmy:Pmen_1520 NADPH-dependent FMN reductase
YP_001751995.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate
YP_001751996.1	PFAM: major facilitator superfamily MFS_1; KEGG: pmy:Pmen_1523 major facilitator superfamily MFS_1
YP_001751997.1	KEGG: pfo:Pfl_2772 hypothetical protein
YP_001751998.1	PFAM: sodium:dicarboxylate symporter; KEGG: pfo:Pfl_2773 sodium:dicarboxylate symporter
YP_001751999.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pst:PSPTO_4062 mandelate racemase/muconate lactonizing enzyme family protein
YP_001752000.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_4061 transcriptional regulator, LysR family
YP_001752001.1	KEGG: rso:RS03923 hypothetical protein
YP_001752002.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: pen:PSEEN3029 chromate transporter
YP_001752003.1	KEGG: pmy:Pmen_2248 hypothetical protein
YP_001752004.1	PFAM: major facilitator superfamily MFS_1; KEGG: smd:Smed_5611 major facilitator superfamily MFS_1
YP_001752005.1	PFAM: protein of unknown function DUF1289; KEGG: pfl:PFL_2415 hypothetical protein
YP_001752006.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: psb:Psyr_1506 cation efflux protein
YP_001752007.1	PFAM: protein of unknown function DUF156; KEGG: psb:Psyr_1505 protein of unknown function DUF156
YP_001752008.1	KEGG: pmy:Pmen_2239 hypothetical protein
YP_001752009.1	KEGG: pmy:Pmen_2240 hypothetical protein
YP_001752010.1	PFAM: protein of unknown function DUF156; KEGG: psb:Psyr_2932 protein of unknown function DUF156
YP_001752011.1	KEGG: psa:PST_1913 predicted membrane protein
YP_001752012.1	PFAM: TraX family protein; KEGG: pmy:Pmen_2245 TraX family protein
YP_001752013.1	KEGG: syx:SynWH7803_0901 staphylococcal nuclease homolog
YP_001752014.1	KEGG: par:Psyc_1264 hypothetical protein
YP_001752015.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: psa:PST_2873 probable sulfate transporter
YP_001752016.1	PFAM: UspA domain protein; KEGG: psa:PST_0155 UspA-related nucleotide-binding protein
YP_001752017.1	PFAM: NUDIX hydrolase; KEGG: psb:Psyr_2666 NUDIX hydrolase
YP_001752018.1	PFAM: transposase IS66; KEGG: pau:PA14_59580 putative transposase
YP_001752019.1	PFAM: IS66 Orf2 family protein; KEGG: pau:PA14_59570 putative transposase
YP_001752020.1	PFAM: transposase IS3/IS911 family protein; KEGG: pst:PSPTO_5581 hypothetical protein
YP_001752021.1	KEGG: pfo:Pfl_2393 hypothetical protein
YP_001752022.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pmy:Pmen_2235 heavy metal sensor signal transduction histidine kinase
YP_001752023.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pmy:Pmen_2234 two component heavy metal response transcriptional regulator, winged helix family
YP_001752024.1	KEGG: pmy:Pmen_2220 hypothetical protein
YP_001752025.1	TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pmy:Pmen_2219 copper-resistance protein, CopA family
YP_001752026.1	KEGG: psa:PST_3382 hypothetical protein
YP_001752027.1	PFAM: copper resistance B precursor; KEGG: pmy:Pmen_2217 copper resistance B precursor
YP_001752028.1	KEGG: pmy:Pmen_2216 hypothetical protein
YP_001752029.1	PFAM: protein of unknown function DUF411; KEGG: pmy:Pmen_2215 protein of unknown function DUF411
YP_001752030.1	KEGG: pmy:Pmen_2213 hypothetical protein
YP_001752031.1	KEGG: pst:PSPTO_0206 hypothetical protein
YP_001752032.1	KEGG: pap:PSPA7_3052 hypothetical protein
YP_001752033.1	KEGG: pap:PSPA7_3053 hypothetical protein
YP_001752035.1	KEGG: har:HEAR3220 hypothetical protein
YP_001752036.1	KEGG: ava:Ava_3495 Tn7-like transposition protein D
YP_001752037.1	KEGG: pfo:Pfl_5723 Tn7-like transposition protein C
YP_001752038.1	KEGG: pfo:Pfl_5724 Tn7-like transposition protein B
YP_001752039.1	PFAM: TnsA endonuclease; KEGG: pfo:Pfl_5725 hypothetical protein
YP_001752040.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_001752041.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: pen:PSEEN5538 transcriptional repressor, DeoR family
YP_001752042.1	TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: pen:PSEEN5540 UDP-N-acetylglucosamine pyrophosphorylase
YP_001752043.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_001752044.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_001752045.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_001752046.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_001752047.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_001752048.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_001752049.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_001752050.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_001752051.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation
YP_001752052.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: pen:PSEEN5551 chromosomal partitioning protein ParB
YP_001752053.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN5552 chromosome partitioning ATPase ParA
YP_001752054.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_001752055.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_001752056.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_001752057.1	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria