-- dump date 20140620_013829 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 379731000001 SEQ_END SEQ_END NC_009434.1 4567418 4567418 DR NC_009434.1; contig end 4567418..4567418 Pseudomonas stutzeri A1501 YP_001170551.1 CDS dnaA NC_009434.1 380 1924 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 380..1924 Pseudomonas stutzeri A1501 5094553 YP_001170552.1 CDS dnaN NC_009434.1 1958 3061 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1958..3061 Pseudomonas stutzeri A1501 5095077 YP_001170553.1 CDS recF NC_009434.1 3071 4183 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3071..4183 Pseudomonas stutzeri A1501 5095078 YP_001170554.1 CDS gyrB NC_009434.1 4180 6594 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4180..6594 Pseudomonas stutzeri A1501 5095079 YP_001170555.1 CDS ahpF-1 NC_009434.1 6798 8360 D Code: O; COG: COG3634; alkyl hydroperoxide reductase subunit F 6798..8360 Pseudomonas stutzeri A1501 5095080 YP_001170556.1 CDS PST_0006 NC_009434.1 8434 9804 R diguanylate cyclase complement(8434..9804) Pseudomonas stutzeri A1501 5095081 YP_001170557.1 CDS PST_0007 NC_009434.1 9852 10601 R Code: I; COG: COG0204; 1-acylglycerol-3-phosphate O-acyltransferase complement(9852..10601) Pseudomonas stutzeri A1501 5095082 YP_001170558.1 CDS PST_0008 NC_009434.1 10598 11176 R Code: E; COG: COG0241; histidinol-phosphate phosphatase family protein complement(10598..11176) Pseudomonas stutzeri A1501 5095083 YP_001170559.1 CDS glyS NC_009434.1 11145 13199 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(11145..13199) Pseudomonas stutzeri A1501 5095084 YP_001170560.1 CDS glyQ NC_009434.1 13196 14062 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(13196..14062) Pseudomonas stutzeri A1501 5095085 YP_001170561.1 CDS tag NC_009434.1 14251 14808 D Code: L; COG: COG2818; DNA-3-methyladenine glycosidase I 14251..14808 Pseudomonas stutzeri A1501 5095086 YP_001170562.2 CDS PST_0012 NC_009434.1 14908 15795 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 14908..15795 Pseudomonas stutzeri A1501 5095087 YP_001170563.1 CDS PST_0013 NC_009434.1 16105 16506 R Code: R; COG: COG0457; hypothetical protein complement(16105..16506) Pseudomonas stutzeri A1501 5095088 YP_001170564.1 CDS PST_0014 NC_009434.1 16570 17409 R Code: E; COG: COG1126; amino acid ABC transporter, ATP-binding protein complement(16570..17409) Pseudomonas stutzeri A1501 5095089 YP_001170565.1 CDS PST_0015 NC_009434.1 17406 18065 R Code: E; COG: COG0765; amino acid ABC transporter permease complement(17406..18065) Pseudomonas stutzeri A1501 5095090 YP_001170566.1 CDS PST_0016 NC_009434.1 18062 18766 R Code: E; COG: COG0765; amino acid ABC transporter permease complement(18062..18766) Pseudomonas stutzeri A1501 5095091 YP_001170567.1 CDS PST_0017 NC_009434.1 18841 19698 R Code: ET; COG: COG0834; amino acid ABC transporter, periplasmic amino acid-binding protein complement(18841..19698) Pseudomonas stutzeri A1501 5095092 YP_001170568.1 CDS trkA NC_009434.1 20038 21411 R involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein complement(20038..21411) Pseudomonas stutzeri A1501 5095093 YP_001170569.1 CDS sun NC_009434.1 21486 22808 R Code: J; COG: COG0144; ribosomal RNA small subunit methyltransferase B complement(21486..22808) Pseudomonas stutzeri A1501 5095094 YP_001170570.1 CDS fmt NC_009434.1 22805 23749 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(22805..23749) Pseudomonas stutzeri A1501 5095095 YP_001170571.1 CDS def NC_009434.1 23802 24308 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(23802..24308) Pseudomonas stutzeri A1501 5095096 YP_001170572.1 CDS PST_0022 NC_009434.1 24357 25481 D Code: S; COG: COG1652; hypothetical protein 24357..25481 Pseudomonas stutzeri A1501 5095097 YP_001170573.1 CDS PST_0023 NC_009434.1 25568 26665 D Code: LU; COG: COG0758; DNA processing protein DprA 25568..26665 Pseudomonas stutzeri A1501 5095098 YP_001170574.1 CDS PST_0024 NC_009434.1 26803 27360 D Code: J; COG: COG0009; hypothetical protein 26803..27360 Pseudomonas stutzeri A1501 5095099 YP_001170575.1 CDS qor-1 NC_009434.1 27414 28166 R Code: CR; COG: COG0604; quinone oxidoreductase complement(27414..28166) Pseudomonas stutzeri A1501 5095100 YP_001170576.1 CDS hemF NC_009434.1 28544 29464 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 28544..29464 Pseudomonas stutzeri A1501 5095101 YP_001170577.1 CDS aroE NC_009434.1 29537 30367 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 29537..30367 Pseudomonas stutzeri A1501 5095102 YP_001170578.1 CDS PST_0028 NC_009434.1 30459 30965 R putative NADH-flavin reductase complement(30459..30965) Pseudomonas stutzeri A1501 5095103 YP_001170579.1 CDS PST_0029 NC_009434.1 31077 31382 R Code: S; COG: COG4575; hypothetical protein complement(31077..31382) Pseudomonas stutzeri A1501 5095104 YP_001170580.1 CDS pbpG NC_009434.1 31408 32580 D specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 31408..32580 Pseudomonas stutzeri A1501 5095105 YP_001170581.1 CDS PST_0031 NC_009434.1 33154 35304 D Code: P; COG: COG1629; TonB-dependent receptor 33154..35304 Pseudomonas stutzeri A1501 5095106 YP_001170582.1 CDS PST_0032 NC_009434.1 35226 36827 D Na+/proline symporter 35226..36827 Pseudomonas stutzeri A1501 5095107 YP_001170583.1 CDS PST_0033 NC_009434.1 36806 38509 R Code: S; COG: COG4425; hypothetical protein complement(36806..38509) Pseudomonas stutzeri A1501 5095108 YP_001170584.1 CDS PST_0034 NC_009434.1 38674 40743 D trehalose synthase 38674..40743 Pseudomonas stutzeri A1501 5095109 YP_001170585.1 CDS PST_0035 NC_009434.1 40827 41432 D hypothetical protein 40827..41432 Pseudomonas stutzeri A1501 5095110 YP_001170586.1 CDS metQ-2 NC_009434.1 41544 42317 R Code: P; COG: COG1464; D-methionine-binding lipoprotein MetQ complement(41544..42317) Pseudomonas stutzeri A1501 5095111 YP_001170587.1 CDS metI-2 NC_009434.1 42376 43053 R Code: P; COG: COG2011; D-methionine ABC transporter permease complement(42376..43053) Pseudomonas stutzeri A1501 5095112 YP_001170588.1 CDS metN NC_009434.1 43053 44117 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(43053..44117) Pseudomonas stutzeri A1501 5095392 YP_001170589.1 CDS katE NC_009434.1 44325 46460 D Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; hydroperoxidase II 44325..46460 Pseudomonas stutzeri A1501 5095393 YP_001170590.1 CDS PST_0040 NC_009434.1 46605 47102 R Code: R; COG: COG1451; metal-dependent hydrolase complement(46605..47102) Pseudomonas stutzeri A1501 5095394 YP_001170591.1 CDS PST_0041 NC_009434.1 47102 47887 R Code: P; COG: COG1108; zinc ABC transporter permease complement(47102..47887) Pseudomonas stutzeri A1501 5095395 YP_001170592.1 CDS znuC NC_009434.1 47889 48578 R Code: P; COG: COG1121; zinc transport protein ZnuC complement(47889..48578) Pseudomonas stutzeri A1501 5095396 YP_001170593.1 CDS np20 NC_009434.1 48656 49141 R Code: P; COG: COG0735; transcriptional regulator np20 complement(48656..49141) Pseudomonas stutzeri A1501 5095397 YP_001170594.1 CDS znuA NC_009434.1 49200 50192 D Code: P; COG: COG4531; zinc ABC transporter periplasmic zinc-binding protein 49200..50192 Pseudomonas stutzeri A1501 5095398 YP_001170595.1 CDS PST_0045 NC_009434.1 50331 51650 R catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; omega amino acid--pyruvate transaminase complement(50331..51650) Pseudomonas stutzeri A1501 5095399 YP_001170596.1 CDS PST_0047 NC_009434.1 51789 53336 R hypothetical protein complement(51789..53336) Pseudomonas stutzeri A1501 5095400 YP_001170597.1 CDS PST_0046 NC_009434.1 51837 53330 D Code: C; COG: COG1012; aldehyde dehydrogenase family protein 51837..53330 Pseudomonas stutzeri A1501 5095401 YP_001170598.1 CDS PST_0048 NC_009434.1 53432 54835 R Code: M; COG: COG1215; glycosyl transferase family protein complement(53432..54835) Pseudomonas stutzeri A1501 5095402 YP_001170599.1 CDS PST_0049 NC_009434.1 54832 55869 R hypothetical protein complement(54832..55869) Pseudomonas stutzeri A1501 5095403 YP_001170600.1 CDS PST_0050 NC_009434.1 57079 57468 R response regulator receiver complement(57079..57468) Pseudomonas stutzeri A1501 5095404 YP_001170601.1 CDS PST_0051 NC_009434.1 57465 60371 R two-component sensor complement(57465..60371) Pseudomonas stutzeri A1501 5095405 YP_001170602.1 CDS PST_0052 NC_009434.1 60469 62109 R Code: T; COG: COG3706; two-component response regulator complement(60469..62109) Pseudomonas stutzeri A1501 5095406 YP_001170603.1 CDS cheY-1 NC_009434.1 62102 62491 R Code: T; COG: COG0784; chemotaxis protein CheY complement(62102..62491) Pseudomonas stutzeri A1501 5095407 YP_001170604.1 CDS PST_0054 NC_009434.1 62488 64869 R signal transduction histidine kinase complement(62488..64869) Pseudomonas stutzeri A1501 5095408 YP_001170605.1 CDS PST_0055 NC_009434.1 64976 65362 R Code: T; COG: COG0784; two-component response regulator complement(64976..65362) Pseudomonas stutzeri A1501 5095409 YP_001170606.1 CDS PST_0056 NC_009434.1 65412 68450 R hypothetical protein complement(65412..68450) Pseudomonas stutzeri A1501 5095410 YP_001170607.1 CDS PST_0057 NC_009434.1 68677 69885 D Code: I; COG: COG1398; fatty acid desaturase 68677..69885 Pseudomonas stutzeri A1501 5095411 YP_001170608.1 CDS PST_0058 NC_009434.1 70203 71012 D Code: T; COG: COG2199; sensory box protein 70203..71012 Pseudomonas stutzeri A1501 5095412 YP_001170609.1 CDS PST_0059 NC_009434.1 71034 71438 R putative lyase complement(71034..71438) Pseudomonas stutzeri A1501 5095413 YP_001170610.1 CDS PST_0060 NC_009434.1 71485 72591 R catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase complement(71485..72591) Pseudomonas stutzeri A1501 5095414 YP_001170611.1 CDS PST_0061 NC_009434.1 72692 73573 R Code: R; COG: COG0388; hydratase complement(72692..73573) Pseudomonas stutzeri A1501 5095415 YP_001170612.1 CDS PST_0062 NC_009434.1 73698 74348 R Code: K; COG: COG1309; TetR family transcriptional regulator complement(73698..74348) Pseudomonas stutzeri A1501 5095416 YP_001170613.1 CDS PST_0063 NC_009434.1 74423 75796 R Code: E; COG: COG0174; glutamate--ammonia ligase complement(74423..75796) Pseudomonas stutzeri A1501 5095417 YP_001170614.1 CDS PST_0064 NC_009434.1 76037 76783 D Code: R; COG: COG2071; glutamine amidotransferase 76037..76783 Pseudomonas stutzeri A1501 5095418 YP_001170615.1 CDS PST_0065 NC_009434.1 76826 78184 D Code: E; COG: COG0174; putative glutamine synthetase, catalytic region 76826..78184 Pseudomonas stutzeri A1501 5095419 YP_001170616.1 CDS PST_0066 NC_009434.1 78252 79610 D Code: H; COG: COG0161; putative aminotransferase 78252..79610 Pseudomonas stutzeri A1501 5095420 YP_001170617.1 CDS potF2 NC_009434.1 79827 80924 D Code: E; COG: COG0687; putrescine ABC transporter periplasmic putrescine-binding protein 79827..80924 Pseudomonas stutzeri A1501 5095421 YP_001170618.1 CDS potF3 NC_009434.1 81202 82287 D Code: E; COG: COG0687; putrescine ABC transporter periplasmic putrescine-binding protein 81202..82287 Pseudomonas stutzeri A1501 5095422 YP_001170619.1 CDS potG NC_009434.1 82435 83586 D Code: E; COG: COG3842; putrescine ABC transporter, ATP-binding protein 82435..83586 Pseudomonas stutzeri A1501 5095423 YP_001170620.1 CDS potH NC_009434.1 83583 84479 D Code: E; COG: COG1176; putrescine ABC transporter permease 83583..84479 Pseudomonas stutzeri A1501 5095424 YP_001170621.1 CDS potI NC_009434.1 84476 85378 D Code: E; COG: COG1177; putrescine ABC transporter permease 84476..85378 Pseudomonas stutzeri A1501 5095425 YP_001170622.1 CDS PST_0073 NC_009434.1 85463 86125 R thiol-disulfide isomerase and thioredoxins protein complement(85463..86125) Pseudomonas stutzeri A1501 5095426 YP_001170623.1 CDS PST_0072 NC_009434.1 86118 87056 D Code: I; COG: COG2267; lysophospholipase 86118..87056 Pseudomonas stutzeri A1501 5095427 YP_001170624.1 CDS PST_0074 NC_009434.1 87070 87834 R hypothetical protein complement(87070..87834) Pseudomonas stutzeri A1501 5095428 YP_001170625.1 CDS PST_0075 NC_009434.1 88065 88598 D Code: O; COG: COG3751; 2OG-Fe(II) oxygenase 88065..88598 Pseudomonas stutzeri A1501 5095429 YP_001170626.1 CDS dctM NC_009434.1 88681 89961 R Code: G; COG: COG1593; C4-dicarboxylate transporter complement(88681..89961) Pseudomonas stutzeri A1501 5095430 YP_001170627.1 CDS dctQ NC_009434.1 89958 90587 R Code: G; COG: COG3090; dicarboxylate transporter complement(89958..90587) Pseudomonas stutzeri A1501 5095431 YP_001170628.1 CDS dctP NC_009434.1 90853 91923 R Code: G; COG: COG1638; C4 dicarboxylate binding protein complement(90853..91923) Pseudomonas stutzeri A1501 5095432 YP_001170629.1 CDS dctD NC_009434.1 92194 93588 R Code: T; COG: COG2204; C4 dicarboxylate transport response regulator protein complement(92194..93588) Pseudomonas stutzeri A1501 5095433 YP_001170630.1 CDS dctB NC_009434.1 93585 95390 R Code: T; COG: COG4191; C4 dicarboxylate transport sensor protein complement(93585..95390) Pseudomonas stutzeri A1501 5095434 YP_001170631.1 CDS PST_0081 NC_009434.1 95496 96410 R Code: M; COG: COG1091; dTDP-4-dehydrorhamnose reductase complement(95496..96410) Pseudomonas stutzeri A1501 5095435 YP_001170632.1 CDS PST_0082 NC_009434.1 96407 96952 R Code: M; COG: COG1898; dTDP-4-dehydrorhamnose 3,5-epimerase complement(96407..96952) Pseudomonas stutzeri A1501 5095436 YP_001170633.1 CDS PST_0083 NC_009434.1 96949 97821 R Code: M; COG: COG1209; glucose 1 PH thymidilate transferase complement(96949..97821) Pseudomonas stutzeri A1501 5095437 YP_001170634.1 CDS rfbB-2 NC_009434.1 97818 98807 R Code: M; COG: COG1088; dTDP-glucose 4,6-dehydratase complement(97818..98807) Pseudomonas stutzeri A1501 5095438 YP_001170635.1 CDS PST_0085 NC_009434.1 99085 100200 R Code: V; COG: COG0842; multidrug ABC transporter permease complement(99085..100200) Pseudomonas stutzeri A1501 5095439 YP_001170636.1 CDS PST_0086 NC_009434.1 100202 102973 R ABC transporter ATP-binding protein/permease complement(100202..102973) Pseudomonas stutzeri A1501 5095440 YP_001170637.1 CDS PST_0087 NC_009434.1 102937 104046 R Code: M; COG: COG0845; Type I antifreeze protein:HlyD family secretion protein complement(102937..104046) Pseudomonas stutzeri A1501 5095441 YP_001170638.1 CDS PST_0088 NC_009434.1 104132 104752 R Code: R; COG: COG3218; putative lipoprotein complement(104132..104752) Pseudomonas stutzeri A1501 5095442 YP_001170639.1 CDS PST_0089 NC_009434.1 104749 105687 R Code: Q; COG: COG1463; ABC transporter permease complement(104749..105687) Pseudomonas stutzeri A1501 5095443 YP_001170640.1 CDS PST_0090 NC_009434.1 105689 106474 R Code: Q; COG: COG1127; ABC transporter ATP-binding protein complement(105689..106474) Pseudomonas stutzeri A1501 5095444 YP_001170641.1 CDS PST_0091 NC_009434.1 106471 107559 R Code: Q; COG: COG0767; ABC transporter permease complement(106471..107559) Pseudomonas stutzeri A1501 5095445 YP_001170642.1 CDS PST_0092 NC_009434.1 107764 108900 R catalase complement(107764..108900) Pseudomonas stutzeri A1501 5095446 YP_001170643.1 CDS PST_0093 NC_009434.1 108928 110799 R hypothetical protein complement(108928..110799) Pseudomonas stutzeri A1501 5095447 YP_001170644.1 CDS PST_0095 NC_009434.1 111344 112039 D Code: C; COG: COG3658; nickel-dependent hydrogenase b-type cytochrome subunit 111344..112039 Pseudomonas stutzeri A1501 5095449 YP_001170645.1 CDS gabD-2 NC_009434.1 112055 114289 D Code: C; COG: COG1012; succinate-semialdehyde dehydrogenase 112055..114289 Pseudomonas stutzeri A1501 5095450 YP_001170646.1 CDS PST_0097 NC_009434.1 112076 112528 R Code: C; COG: COG3909; cytochrome c, class II complement(112076..112528) Pseudomonas stutzeri A1501 5095451 YP_001170647.1 CDS PST_0098 NC_009434.1 114439 115644 D Code: T; COG: COG1639; response regulator 114439..115644 Pseudomonas stutzeri A1501 5095452 YP_001170648.1 CDS PST_0099 NC_009434.1 115867 117972 D enoyl-CoA hydratase 115867..117972 Pseudomonas stutzeri A1501 5095453 YP_001170649.1 CDS PST_0100 NC_009434.1 118016 119212 D Code: I; COG: COG1960; putative acyl-CoA dehydrogenase family protein 118016..119212 Pseudomonas stutzeri A1501 5095454 YP_001170650.1 CDS PST_0101 NC_009434.1 119225 120367 D Code: I; COG: COG1960; putative acyl-CoA dehydrogenase 119225..120367 Pseudomonas stutzeri A1501 5095455 YP_001170651.1 CDS PST_0102 NC_009434.1 120531 121889 R Code: GEPR; COG: COG0477; MFS family transporter complement(120531..121889) Pseudomonas stutzeri A1501 5095456 YP_001170652.1 CDS PST_0103 NC_009434.1 122031 122798 R Code: R; COG: COG4757; alpha/beta hydrolase complement(122031..122798) Pseudomonas stutzeri A1501 5095457 YP_001170653.1 CDS PST_0104 NC_009434.1 123014 123592 D Code: K; COG: COG1309; transcriptional regulator 123014..123592 Pseudomonas stutzeri A1501 5095458 YP_001170654.1 CDS PST_0105 NC_009434.1 123606 124466 R Code: K; COG: COG1414; transcriptional regulator complement(123606..124466) Pseudomonas stutzeri A1501 5095459 YP_001170655.1 CDS PST_0106 NC_009434.1 124561 126180 D Code: IQ; COG: COG0318; long-chain-fatty-acid--CoA ligase 124561..126180 Pseudomonas stutzeri A1501 5095460 YP_001170656.1 CDS rpmB NC_009434.1 126477 126713 D required for 70S ribosome assembly; 50S ribosomal protein L28 126477..126713 Pseudomonas stutzeri A1501 5095184 YP_001170657.1 CDS rpmG NC_009434.1 126725 126880 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 126725..126880 Pseudomonas stutzeri A1501 5095185 YP_001170658.1 CDS PST_0109 NC_009434.1 126975 129212 D Code: F; COG: COG0209; ribonucleotide reductase, alpha subunit 126975..129212 Pseudomonas stutzeri A1501 5095186 YP_001170659.1 CDS PST_0110 NC_009434.1 129271 129978 D Code: F; COG: COG0209; ribonucleotide reductase, alpha subunit 129271..129978 Pseudomonas stutzeri A1501 5095187 YP_001170660.1 CDS PST_0111 NC_009434.1 130055 131620 R Code: R; COG: COG1611; decarboxylase family protein complement(130055..131620) Pseudomonas stutzeri A1501 5095188 YP_001170661.1 CDS thrB NC_009434.1 131670 132623 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase complement(131670..132623) Pseudomonas stutzeri A1501 5095189 YP_001170662.1 CDS PST_0114 NC_009434.1 132648 132971 R hypothetical protein complement(132648..132971) Pseudomonas stutzeri A1501 5095190 YP_001170663.1 CDS polA NC_009434.1 132958 135753 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 132958..135753 Pseudomonas stutzeri A1501 5095191 YP_001170664.1 CDS PST_0115 NC_009434.1 136037 137989 R hypothetical protein complement(136037..137989) Pseudomonas stutzeri A1501 5095192 YP_001170665.1 CDS PST_0116 NC_009434.1 137986 138333 R hypothetical protein complement(137986..138333) Pseudomonas stutzeri A1501 5095193 YP_001170666.1 CDS PST_0117 NC_009434.1 138349 138645 R holliday junction resolvasome, helicase subunit complement(138349..138645) Pseudomonas stutzeri A1501 5095194 YP_001170667.1 CDS PST_0118 NC_009434.1 138754 139071 R hypothetical protein complement(138754..139071) Pseudomonas stutzeri A1501 5095195 YP_001170668.1 CDS PST_0119 NC_009434.1 139533 140333 R Code: K; COG: COG2207; AraC family transcriptional regulator complement(139533..140333) Pseudomonas stutzeri A1501 5095196 YP_001170669.1 CDS PST_0120 NC_009434.1 140422 141411 D Code: R; COG: COG0385; bile acid/Na+ symporter family protein 140422..141411 Pseudomonas stutzeri A1501 5095197 YP_001170670.1 CDS PST_0121 NC_009434.1 141533 142123 D Code: R; COG: COG2249; oxidoreductase 141533..142123 Pseudomonas stutzeri A1501 5095198 YP_001170671.1 CDS pntB NC_009434.1 142193 143623 R Code: C; COG: COG1282; pyridine nucleotide transhydrogenase subunit beta complement(142193..143623) Pseudomonas stutzeri A1501 5095199 YP_001170672.1 CDS pntAB NC_009434.1 143633 143950 R Code: C; COG: COG3288; NAD(P) transhydrogenase subunit alpha part 2 complement(143633..143950) Pseudomonas stutzeri A1501 5095200 YP_001170673.1 CDS pntAA NC_009434.1 143964 145085 R Code: C; COG: COG3288; NAD(P) transhydrogenase subunit alpha part 1 complement(143964..145085) Pseudomonas stutzeri A1501 5095201 YP_001170674.1 CDS xcpR NC_009434.1 145398 147119 D Code: NU; COG: COG2804; general secretion pathway protein E 145398..147119 Pseudomonas stutzeri A1501 5095202 YP_001170675.1 CDS xcpS NC_009434.1 147270 148484 D Code: NU; COG: COG1459; general secretion pathway protein F 147270..148484 Pseudomonas stutzeri A1501 5095203 YP_001170676.1 CDS xcpT NC_009434.1 148490 148930 D Code: NU; COG: COG2165; general secretion pathway protein G 148490..148930 Pseudomonas stutzeri A1501 5095204 YP_001170677.1 CDS xcpU NC_009434.1 148934 149503 D Code: NU; COG: COG2165; general secretion pathway protein H 148934..149503 Pseudomonas stutzeri A1501 5095205 YP_001170678.1 CDS xcpV NC_009434.1 149500 149916 D Code: NU; COG: COG2165; general secretion pathway protein I 149500..149916 Pseudomonas stutzeri A1501 5095206 YP_001170679.1 CDS xcpW NC_009434.1 149916 150629 D Code: U; COG: COG4795; general secretion pathway protein J 149916..150629 Pseudomonas stutzeri A1501 5095207 YP_001170680.1 CDS xcpX NC_009434.1 150626 151615 D Code: U; COG: COG3156; general secretion pathway protein K 150626..151615 Pseudomonas stutzeri A1501 5095208 YP_001170681.1 CDS xcpY NC_009434.1 151816 152748 D Code: U; COG: COG3297; general secretion pathway protein L 151816..152748 Pseudomonas stutzeri A1501 5095209 YP_001170682.1 CDS xcpZ NC_009434.1 152751 153266 D Code: U; COG: COG3149; general secretion pathway protein M 152751..153266 Pseudomonas stutzeri A1501 5095210 YP_001170683.1 CDS PST_0134 NC_009434.1 153304 154707 R Code: T; COG: COG1639; signal transduction protein complement(153304..154707) Pseudomonas stutzeri A1501 5095211 YP_001170684.1 CDS recG NC_009434.1 154783 156855 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(154783..156855) Pseudomonas stutzeri A1501 5095212 YP_001170685.1 CDS PST_0136 NC_009434.1 156860 157789 R Code: K; COG: COG0583; transcriptional regulator complement(156860..157789) Pseudomonas stutzeri A1501 5095213 YP_001170686.1 CDS PST_0137 NC_009434.1 157912 158772 D Code: MG; COG: COG0451; epimerase/dehydratase-related protein 157912..158772 Pseudomonas stutzeri A1501 5095214 YP_001170687.1 CDS PST_0138 NC_009434.1 158956 160128 D Code: ER; COG: COG1063; zinc-containing dehydrogenase 158956..160128 Pseudomonas stutzeri A1501 5095215 YP_001170688.1 CDS PST_0139 NC_009434.1 160188 160706 D transcriptional regulator 160188..160706 Pseudomonas stutzeri A1501 5095216 YP_001170689.1 CDS PST_0140 NC_009434.1 160825 161757 D Code: R; COG: COG0679; hypothetical protein 160825..161757 Pseudomonas stutzeri A1501 5095217 YP_001170690.1 CDS PST_0141 NC_009434.1 161828 162775 R Code: J; COG: COG2890; HemK family modification methylase complement(161828..162775) Pseudomonas stutzeri A1501 5095218 YP_001170691.1 CDS PST_0142 NC_009434.1 162799 164220 R hypothetical protein complement(162799..164220) Pseudomonas stutzeri A1501 5095219 YP_001170692.1 CDS PST_0143 NC_009434.1 164739 165932 R Code: G; COG: COG2706; 3-carboxymuconate cyclase complement(164739..165932) Pseudomonas stutzeri A1501 5095220 YP_001170693.1 CDS PST_0144 NC_009434.1 165956 167218 D Code: I; COG: COG1960; isovaleryl-CoA dehydrogenase 165956..167218 Pseudomonas stutzeri A1501 5095221 YP_001170694.1 CDS PST_0145 NC_009434.1 167215 170001 D two-component hybrid sensor and regulator protein 167215..170001 Pseudomonas stutzeri A1501 5095222 YP_001170695.1 CDS PST_0146 NC_009434.1 170182 171153 R Code: S; COG: COG3182; hypothetical protein complement(170182..171153) Pseudomonas stutzeri A1501 5095223 YP_001170696.1 CDS PST_0147 NC_009434.1 171309 173591 R Code: P; COG: COG1629; TonB-dependent ferric siderophore receptor complement(171309..173591) Pseudomonas stutzeri A1501 5095224 YP_001170697.1 CDS PST_0148 NC_009434.1 173813 174274 D ketosteroid isomerase 173813..174274 Pseudomonas stutzeri A1501 5095225 YP_001170698.1 CDS PST_0149 NC_009434.1 174360 174716 D Code: S; COG: COG3795; hypothetical protein 174360..174716 Pseudomonas stutzeri A1501 5095226 YP_001170699.1 CDS PST_0150 NC_009434.1 174719 175960 D Code: K; COG: COG4941; ECF subfamily RNA polymerase sigma-70 factor 174719..175960 Pseudomonas stutzeri A1501 5095227 YP_001170700.1 CDS PST_0151 NC_009434.1 176173 177516 R Code: T; COG: COG2204; sigma-54 dependent DNA-binding response regulator complement(176173..177516) Pseudomonas stutzeri A1501 5095228 YP_001170701.1 CDS PST_0153 NC_009434.1 177548 179431 R Code: T; COG: COG4191; sensor histidine kinase complement(177548..179431) Pseudomonas stutzeri A1501 5095229 YP_001170702.1 CDS PST_0152 NC_009434.1 179422 180726 D Code: T; COG: COG2206; hypothetical protein 179422..180726 Pseudomonas stutzeri A1501 5095230 YP_001170703.1 CDS PST_0154 NC_009434.1 181021 182508 D Code: P; COG: COG0659; sulfate transporter 181021..182508 Pseudomonas stutzeri A1501 5095231 YP_001170704.1 CDS PST_0155 NC_009434.1 182523 183374 D Code: T; COG: COG0589; UspA-related nucleotide-binding protein 182523..183374 Pseudomonas stutzeri A1501 5095232 YP_001170705.1 CDS PST_0156 NC_009434.1 183406 184587 R Code: M; COG: COG2230; cyclopropane-fatty-acyl-phospholipid synthase complement(183406..184587) Pseudomonas stutzeri A1501 5095233 YP_001170706.1 CDS PST_0157 NC_009434.1 184742 185116 D Code: R; COG: COG2044; hypothetical protein 184742..185116 Pseudomonas stutzeri A1501 5095234 YP_001170707.1 CDS PST_0158 NC_009434.1 185113 185577 D Code: E; COG: COG0509; glycine cleavage system H protein 185113..185577 Pseudomonas stutzeri A1501 5095235 YP_001170708.1 CDS PST_0159 NC_009434.1 185662 186165 R hypothetical protein complement(185662..186165) Pseudomonas stutzeri A1501 5095236 YP_001170709.1 CDS PST_0160 NC_009434.1 186289 187056 D Code: IQR; COG: COG1028; NAD-dependent 7-alpha-hydroxysteroid dehydrogenase 186289..187056 Pseudomonas stutzeri A1501 5095237 YP_001170710.1 CDS selB NC_009434.1 187322 189238 R Code: J; COG: COG3276; selenocysteine-specific elongation factor complement(187322..189238) Pseudomonas stutzeri A1501 5095238 YP_001170711.1 CDS selA NC_009434.1 189235 190644 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(189235..190644) Pseudomonas stutzeri A1501 5095239 YP_001170712.1 CDS PST_0163 NC_009434.1 190641 191558 R Code: O; COG: COG3058; formate dehydrogenase accessory protein complement(190641..191558) Pseudomonas stutzeri A1501 5095240 YP_001170713.1 CDS fdnI-1 NC_009434.1 191685 192308 R Code: C; COG: COG2864; nitrate-inducible formate dehydrogenase subunit gamma complement(191685..192308) Pseudomonas stutzeri A1501 5095241 YP_001170714.1 CDS fdnH-1 NC_009434.1 192366 193301 R Code: C; COG: COG0437; nitrate-inducible formate dehydrogenase subunit beta complement(192366..193301) Pseudomonas stutzeri A1501 5095242 YP_001170715.1 CDS PST_0166 NC_009434.1 193301 195736 R Code: C; COG: COG0243; formate dehydrogenase-O, major subunit complement(193301..195736) Pseudomonas stutzeri A1501 5095243 YP_001170716.1 CDS PST_0167 NC_009434.1 195785 196375 R formate dehydrogenase-O, major subunit complement(195785..196375) Pseudomonas stutzeri A1501 5095244 YP_001170717.1 CDS PST_0168 NC_009434.1 196527 197363 R Code: K; COG: COG2207; AraC family transcriptional regulator complement(196527..197363) Pseudomonas stutzeri A1501 5095245 YP_001170718.1 CDS ohr NC_009434.1 197483 197911 D Code: O; COG: COG1764; organic hydroperoxide resistance protein 197483..197911 Pseudomonas stutzeri A1501 5095246 YP_001170719.1 CDS PST_0170 NC_009434.1 197950 198900 D Code: R; COG: COG0596; non-heme chloroperoxidase 197950..198900 Pseudomonas stutzeri A1501 5095247 YP_001170720.1 CDS PST_0171 NC_009434.1 199032 199874 R Code: S; COG: COG4395; hypothetical protein complement(199032..199874) Pseudomonas stutzeri A1501 5095248 YP_001170721.1 CDS PST_0172 NC_009434.1 200060 201250 R Code: Q; COG: COG4663; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component complement(200060..201250) Pseudomonas stutzeri A1501 5095249 YP_001170722.1 CDS uvrD NC_009434.1 201237 203426 R unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II complement(201237..203426) Pseudomonas stutzeri A1501 5095250 YP_001170723.1 CDS PST_0174 NC_009434.1 203733 206528 D hypothetical protein 203733..206528 Pseudomonas stutzeri A1501 5095113 YP_001170724.1 CDS PST_0175 NC_009434.1 206562 208013 R Code: O; COG: COG0826; putative protease complement(206562..208013) Pseudomonas stutzeri A1501 5095114 YP_001170725.1 CDS PST_0176 NC_009434.1 208056 208274 R Code: S; COG: COG2841; hypothetical protein complement(208056..208274) Pseudomonas stutzeri A1501 5095115 YP_001170726.1 CDS PST_0177 NC_009434.1 208459 209757 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase complement(208459..209757) Pseudomonas stutzeri A1501 5095116 YP_001170727.1 CDS PST_0178 NC_009434.1 210042 210950 R putative L-proline 4-hydroxylase complement(210042..210950) Pseudomonas stutzeri A1501 5095117 YP_001170728.2 CDS ectC NC_009434.1 211019 211420 R N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid; L-ectoine synthase complement(211019..211420) Pseudomonas stutzeri A1501 5095118 YP_001170729.1 CDS ectB NC_009434.1 211431 212708 R catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase complement(211431..212708) Pseudomonas stutzeri A1501 5095119 YP_001170730.1 CDS ectA NC_009434.1 212705 213286 R Code: KR; COG: COG0454; L-2,4-diaminobutyric acid acetyltransferase complement(212705..213286) Pseudomonas stutzeri A1501 5095120 YP_001170731.1 CDS zwf-3 NC_009434.1 213857 215299 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(213857..215299) Pseudomonas stutzeri A1501 5095121 YP_001170732.1 CDS PST_0183 NC_009434.1 215537 216307 D Code: K; COG: COG1737; RpiR family transcriptional regulator 215537..216307 Pseudomonas stutzeri A1501 5095122 YP_001170733.1 CDS PST_0184 NC_009434.1 216405 216617 D hypothetical protein 216405..216617 Pseudomonas stutzeri A1501 5095123 YP_001170734.1 CDS PST_0185 NC_009434.1 216562 217428 R Code: K; COG: COG0583; transcriptional regulator complement(216562..217428) Pseudomonas stutzeri A1501 5095124 YP_001170735.1 CDS accC-2 NC_009434.1 217499 219175 D biotin carboxylase; with subunit B, the carboxyltansferase/biotincarboxyl carrier subunit catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit A 217499..219175 Pseudomonas stutzeri A1501 5095125 YP_001170736.1 CDS oadA NC_009434.1 219186 220997 D catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 219186..220997 Pseudomonas stutzeri A1501 5095126 YP_001170737.1 CDS PST_0188 NC_009434.1 221187 222128 D Code: R; COG: COG3329; sodium bicarbonate cotransporter 221187..222128 Pseudomonas stutzeri A1501 5095127 YP_001170738.1 CDS PST_0189 NC_009434.1 222130 222432 D hypothetical protein 222130..222432 Pseudomonas stutzeri A1501 5095128 YP_001170739.1 CDS PST_0190 NC_009434.1 222498 223406 D catalyzes the formation of glutamate from glutamine; glutaminase 222498..223406 Pseudomonas stutzeri A1501 5095129 YP_001170740.1 CDS PST_0191 NC_009434.1 223451 224149 D Code: P; COG: COG0288; carbonic anhydrase 223451..224149 Pseudomonas stutzeri A1501 5095130 YP_001170741.1 CDS PST_0192 NC_009434.1 224154 224963 R Code: ET; COG: COG0834; hypothetical protein complement(224154..224963) Pseudomonas stutzeri A1501 5095131 YP_001170742.1 CDS ansA NC_009434.1 225091 226221 R Code: EJ; COG: COG0252; L-asparaginase I complement(225091..226221) Pseudomonas stutzeri A1501 5095132 YP_001170743.1 CDS PST_0194 NC_009434.1 226184 227605 R Code: E; COG: COG1115; AGCS sodium/alanine/glycine symporter complement(226184..227605) Pseudomonas stutzeri A1501 5095133 YP_001170744.1 CDS PST_0195 NC_009434.1 227777 228595 D Code: K; COG: COG1396; Cro/CI family transcriptional regulator 227777..228595 Pseudomonas stutzeri A1501 5095134 YP_001170745.1 CDS PST_0196 NC_009434.1 228607 229923 R Code: C; COG: COG1301; proton-glutamate symporter complement(228607..229923) Pseudomonas stutzeri A1501 5095135 YP_001170746.1 CDS aspA NC_009434.1 229958 231382 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(229958..231382) Pseudomonas stutzeri A1501 5095136 YP_001170747.1 CDS PST_0198 NC_009434.1 231545 232477 D Code: K; COG: COG0583; transcriptional regulator 231545..232477 Pseudomonas stutzeri A1501 5095137 YP_001170748.1 CDS PST_0199 NC_009434.1 232677 235361 D hypothetical protein 232677..235361 Pseudomonas stutzeri A1501 5095138 YP_001170749.1 CDS PST_0200 NC_009434.1 235429 237354 D Code: ER; COG: COG3185; 4-hydroxyphenylpyruvate dioxygenase 235429..237354 Pseudomonas stutzeri A1501 5095139 YP_001170750.1 CDS PST_0201 NC_009434.1 237402 239957 D signal transduction histidine kinase 237402..239957 Pseudomonas stutzeri A1501 5095140 YP_001170751.1 CDS purE NC_009434.1 240143 240607 D Code: F; COG: COG0041; phosphoribosylaminoimidazole carboxylase catalytic subunit 240143..240607 Pseudomonas stutzeri A1501 5095141 YP_001170752.1 CDS purK NC_009434.1 240684 241769 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 240684..241769 Pseudomonas stutzeri A1501 5095142 YP_001170753.1 CDS PST_0204 NC_009434.1 241854 242105 D Code: S; COG: COG2261; hypothetical protein 241854..242105 Pseudomonas stutzeri A1501 5095143 YP_001170754.1 CDS PST_0205 NC_009434.1 242158 242694 D Code: S; COG: COG3495; hypothetical protein 242158..242694 Pseudomonas stutzeri A1501 5095144 YP_001170755.1 CDS PST_0206 NC_009434.1 242700 243371 D Code: L; COG: COG1573; uracil-DNA glycosylase 242700..243371 Pseudomonas stutzeri A1501 5095145 YP_001170756.1 CDS ldhA NC_009434.1 243361 244443 R Code: CHR; COG: COG1052; D-lactate dehydrogenase (fermentative) complement(243361..244443) Pseudomonas stutzeri A1501 5095146 YP_001170757.1 CDS cysA NC_009434.1 244447 245433 R Code: P; COG: COG1118; sulfate transport protein CysA complement(244447..245433) Pseudomonas stutzeri A1501 5095147 YP_001170758.1 CDS cysW NC_009434.1 245430 246305 R Code: P; COG: COG4208; sulfate transport protein CysW complement(245430..246305) Pseudomonas stutzeri A1501 5095148 YP_001170759.1 CDS cysT NC_009434.1 246316 247131 R Code: O; COG: COG0555; sulfate transport protein CysT complement(246316..247131) Pseudomonas stutzeri A1501 5095149 YP_001170760.1 CDS cysP NC_009434.1 247271 248269 R Code: P; COG: COG1613; sulfate ABC transporter, periplasmic sulfate-binding protein complement(247271..248269) Pseudomonas stutzeri A1501 5095150 YP_001170761.1 CDS PST_0212 NC_009434.1 248540 248719 R Code: S; COG: COG5583; hypothetical protein complement(248540..248719) Pseudomonas stutzeri A1501 5095151 YP_001170762.1 CDS PST_0213 NC_009434.1 248977 249552 D Code: R; COG: COG3545; hypothetical protein 248977..249552 Pseudomonas stutzeri A1501 5095152 YP_001170763.1 CDS lsfA NC_009434.1 249617 250255 D Code: O; COG: COG0450; antioxidant protein LsfA 249617..250255 Pseudomonas stutzeri A1501 5095153 YP_001170764.1 CDS PST_0215 NC_009434.1 250288 250512 R hypothetical protein complement(250288..250512) Pseudomonas stutzeri A1501 5095154 YP_001170765.1 CDS PST_0216 NC_009434.1 250643 251200 D Code: S; COG: COG3575; hypothetical protein 250643..251200 Pseudomonas stutzeri A1501 5095155 YP_001170766.1 CDS PST_0217 NC_009434.1 251221 251640 R hypothetical protein complement(251221..251640) Pseudomonas stutzeri A1501 5095156 YP_001170767.1 CDS PST_0218 NC_009434.1 252182 254146 R Code: Q; COG: COG2015; alkyl sulfatase complement(252182..254146) Pseudomonas stutzeri A1501 5095157 YP_001170768.1 CDS PST_0219 NC_009434.1 254239 255186 D Code: K; COG: COG0583; transcriptional regulator 254239..255186 Pseudomonas stutzeri A1501 5095158 YP_001170769.1 CDS PST_0220 NC_009434.1 255265 256695 R hypothetical protein complement(255265..256695) Pseudomonas stutzeri A1501 5095159 YP_001170770.1 CDS PST_0221 NC_009434.1 256631 258622 R type V secretory pathway, adhesin AidA complement(256631..258622) Pseudomonas stutzeri A1501 5095160 YP_001170771.1 CDS PST_0222 NC_009434.1 258760 259698 D Code: K; COG: COG2207; AraC family transcriptional regulator 258760..259698 Pseudomonas stutzeri A1501 5095161 YP_001170772.1 CDS PST_0223 NC_009434.1 259736 261220 R hypothetical protein complement(259736..261220) Pseudomonas stutzeri A1501 5095162 YP_001170773.1 CDS PST_0224 NC_009434.1 261656 263431 D Code: L; COG: COG2801; TniA transposase 261656..263431 Pseudomonas stutzeri A1501 5095163 YP_001170774.1 CDS PST_0225 NC_009434.1 263434 264342 D TniB NTP-binding protein 263434..264342 Pseudomonas stutzeri A1501 5095164 YP_001170775.1 CDS PST_0226 NC_009434.1 264339 265556 D TniQ protein 264339..265556 Pseudomonas stutzeri A1501 5095165 YP_001170776.1 CDS PST_0227 NC_009434.1 265617 266231 D Code: L; COG: COG1961; TniR protein 265617..266231 Pseudomonas stutzeri A1501 5095166 YP_001170777.1 CDS PST_0228 NC_009434.1 266687 267601 R Code: P; COG: COG1230; cation efflux system protein complement(266687..267601) Pseudomonas stutzeri A1501 5095167 YP_001170778.1 CDS PST_0229 NC_009434.1 267602 267850 R hypothetical protein complement(267602..267850) Pseudomonas stutzeri A1501 5095168 YP_001170779.1 CDS PST_0230 NC_009434.1 267861 268280 R redox protein, regulator of disulfide bond formation complement(267861..268280) Pseudomonas stutzeri A1501 5095169 YP_001170780.1 CDS PST_0231 NC_009434.1 268285 268773 R putative transferase/hydrolase complement(268285..268773) Pseudomonas stutzeri A1501 5095170 YP_001170781.1 CDS PST_0232 NC_009434.1 268785 269021 R Code: OC; COG: COG0526; thiol-disulfide isomerase and thioredoxins family protein complement(268785..269021) Pseudomonas stutzeri A1501 5095171 YP_001170782.1 CDS PST_0233 NC_009434.1 269032 270069 R Code: R; COG: COG0701; permease complement(269032..270069) Pseudomonas stutzeri A1501 5095172 YP_001170783.1 CDS PST_0234 NC_009434.1 270154 270720 R Code: K; COG: COG1595; sigma-70 factor region 2 complement(270154..270720) Pseudomonas stutzeri A1501 5095173 YP_001170784.1 CDS PST_0235 NC_009434.1 270723 271742 R Code: P; COG: COG0798; sodium bile acid symporter family protein complement(270723..271742) Pseudomonas stutzeri A1501 5095174 YP_001170785.1 CDS PST_0236 NC_009434.1 271805 272308 R Code: T; COG: COG0394; arsenate reductase complement(271805..272308) Pseudomonas stutzeri A1501 5095175 YP_001170786.1 CDS PST_0237 NC_009434.1 272310 274082 R Code: P; COG: COG0003; arsenical pump-driving ATPase complement(272310..274082) Pseudomonas stutzeri A1501 5095176 YP_001170787.1 CDS PST_0238 NC_009434.1 274098 274457 R arsenic operon regulator complement(274098..274457) Pseudomonas stutzeri A1501 5095177 YP_001170788.1 CDS PST_0239 NC_009434.1 274475 274912 R protein-tyrosine phosphatase complement(274475..274912) Pseudomonas stutzeri A1501 5095178 YP_001170789.1 CDS arsC-3 NC_009434.1 274937 275416 R Code: T; COG: COG0394; arsenate reductase complement(274937..275416) Pseudomonas stutzeri A1501 5095179 YP_001170790.1 CDS PST_0241 NC_009434.1 275413 275850 R Code: K; COG: COG0640; arsenic resistance transcriptional regulator complement(275413..275850) Pseudomonas stutzeri A1501 5095180 YP_001170791.1 CDS PST_0242 NC_009434.1 276075 276632 D Code: L; COG: COG1961; DNA invertase 276075..276632 Pseudomonas stutzeri A1501 5095181 YP_001170792.1 CDS PST_0243 NC_009434.1 276629 276889 D hypothetical protein 276629..276889 Pseudomonas stutzeri A1501 5095182 YP_001170793.1 CDS PST_0244 NC_009434.1 277095 278753 D Code: L; COG: COG4584; ISPsy14, transposase 277095..278753 Pseudomonas stutzeri A1501 5095183 YP_001170794.1 CDS PST_0245 NC_009434.1 278740 279390 D Code: L; COG: COG1484; ISPsy14, transposition helper protein 278740..279390 Pseudomonas stutzeri A1501 5095017 YP_001170795.1 CDS PST_0246 NC_009434.1 279536 279787 D hypothetical protein 279536..279787 Pseudomonas stutzeri A1501 5095018 YP_001170796.1 CDS PST_0247 NC_009434.1 280257 280721 D hypothetical protein 280257..280721 Pseudomonas stutzeri A1501 5095019 YP_001170797.1 CDS PST_0248 NC_009434.1 281474 284533 R Code: V; COG: COG0610; type I restriction-modification system endonuclease complement(281474..284533) Pseudomonas stutzeri A1501 5095020 YP_001170798.1 CDS PST_0249 NC_009434.1 284731 286293 R hypothetical protein complement(284731..286293) Pseudomonas stutzeri A1501 5095021 YP_001170799.1 CDS PST_0250 NC_009434.1 286406 287350 R hypothetical protein complement(286406..287350) Pseudomonas stutzeri A1501 5095022 YP_001170800.1 CDS PST_0251 NC_009434.1 287347 288612 R Code: V; COG: COG0732; type I restriction-modification system subunit S complement(287347..288612) Pseudomonas stutzeri A1501 5095023 YP_001170801.1 CDS PST_0252 NC_009434.1 288609 290528 R Code: V; COG: COG0286; type I restriction-modification system, M subunit complement(288609..290528) Pseudomonas stutzeri A1501 5095024 YP_001170802.1 CDS PST_0253 NC_009434.1 290727 291857 R hypothetical protein complement(290727..291857) Pseudomonas stutzeri A1501 5095025 YP_001170803.1 CDS PST_0254 NC_009434.1 291906 292235 R hypothetical protein complement(291906..292235) Pseudomonas stutzeri A1501 5095026 YP_001170804.1 CDS PST_0256 NC_009434.1 293203 293883 R hypothetical protein complement(293203..293883) Pseudomonas stutzeri A1501 5095027 YP_001170805.1 CDS PST_0255 NC_009434.1 293839 294867 D Code: L; COG: COG2826; putative transposase 293839..294867 Pseudomonas stutzeri A1501 5095028 YP_001170806.1 CDS PST_0257 NC_009434.1 294856 295149 R hypothetical protein complement(294856..295149) Pseudomonas stutzeri A1501 5095029 YP_001170807.1 CDS PST_0258 NC_009434.1 295523 296281 R hypothetical protein complement(295523..296281) Pseudomonas stutzeri A1501 5095030 YP_001170808.1 CDS PST_0259 NC_009434.1 296265 297440 R Code: L; COG: COG0582; phage integrase family site specific recombinase complement(296265..297440) Pseudomonas stutzeri A1501 5095031 YP_001170809.1 CDS PST_0261 NC_009434.1 297783 298985 R SAM-dependent methyltransferase complement(297783..298985) Pseudomonas stutzeri A1501 5095033 YP_001170810.1 CDS PST_0262 NC_009434.1 299076 300452 R Code: Q; COG: COG4664; C4 dicarboxylate transporter permease complement(299076..300452) Pseudomonas stutzeri A1501 5095034 YP_001170811.1 CDS PST_0263 NC_009434.1 300445 300996 R Code: Q; COG: COG4665; tripartite transporter, small subunit complement(300445..300996) Pseudomonas stutzeri A1501 5095035 YP_001170812.1 CDS PST_0264 NC_009434.1 301292 302398 D Code: Q; COG: COG4663; extracellular solute-binding protein 301292..302398 Pseudomonas stutzeri A1501 5095036 YP_001170813.1 CDS osmC NC_009434.1 302480 302905 R Code: O; COG: COG1764; osmotically inducible protein OsmC complement(302480..302905) Pseudomonas stutzeri A1501 5095037 YP_001170814.1 CDS PST_0266 NC_009434.1 302947 303255 R ribonucleotide reductase, alpha subunit complement(302947..303255) Pseudomonas stutzeri A1501 5095038 YP_001170815.1 CDS PST_0267 NC_009434.1 303325 308079 R hypothetical protein complement(303325..308079) Pseudomonas stutzeri A1501 5095039 YP_001170816.1 CDS PST_0268 NC_009434.1 308201 309688 R Code: S; COG: COG2989; hypothetical protein complement(308201..309688) Pseudomonas stutzeri A1501 5095040 YP_001170817.1 CDS PST_0269 NC_009434.1 309998 310711 D hypothetical protein 309998..310711 Pseudomonas stutzeri A1501 5095041 YP_001170818.1 CDS PST_0270 NC_009434.1 310809 312593 R Code: NU; COG: COG2804; secretion pathway ATPase complement(310809..312593) Pseudomonas stutzeri A1501 5095042 YP_001170819.1 CDS PST_0271 NC_009434.1 312691 314055 R Code: S; COG: COG3025; adenylate cyclase complement(312691..314055) Pseudomonas stutzeri A1501 5095043 YP_001170820.1 CDS PST_0272 NC_009434.1 314169 314846 D Code: P; COG: COG1392; phosphate transport regulator 314169..314846 Pseudomonas stutzeri A1501 5095044 YP_001170821.1 CDS PST_0273 NC_009434.1 314888 316153 D Code: P; COG: COG0306; phosphate transporter 314888..316153 Pseudomonas stutzeri A1501 5095045 YP_001170822.1 CDS argE NC_009434.1 316272 317423 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 316272..317423 Pseudomonas stutzeri A1501 5095046 YP_001170823.1 CDS argA NC_009434.1 317562 318767 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 317562..318767 Pseudomonas stutzeri A1501 5095047 YP_001170824.1 CDS gshA NC_009434.1 318802 320379 R involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase complement(318802..320379) Pseudomonas stutzeri A1501 5095048 YP_001170825.1 CDS PST_0277 NC_009434.1 320506 320895 R Code: Q; COG: COG2050; phenylacetic acid degradation-related protein complement(320506..320895) Pseudomonas stutzeri A1501 5095049 YP_001170826.1 CDS PST_0278 NC_009434.1 320898 323216 R Code: K; COG: COG2183; S1 RNA-binding domain-containing protein complement(320898..323216) Pseudomonas stutzeri A1501 5095050 YP_001170827.1 CDS PST_0279 NC_009434.1 323314 326772 R cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; cellulose synthase subunit BcsC complement(323314..326772) Pseudomonas stutzeri A1501 5095051 YP_001170828.1 CDS PST_0280 NC_009434.1 326779 329001 R binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein complement(326779..329001) Pseudomonas stutzeri A1501 5095052 YP_001170829.1 CDS bcsA NC_009434.1 328998 331595 R polymerizes uridine 5'-diphosphate glucose to cellulose; acts with BcsB, BcsZ and BcsC in cellulose biosynthesis; cellulose synthase catalytic subunit complement(328998..331595) Pseudomonas stutzeri A1501 5095053 YP_001170830.1 CDS PST_0282 NC_009434.1 331597 332331 R Code: D; COG: COG1192; cellulose synthase complement(331597..332331) Pseudomonas stutzeri A1501 5095054 YP_001170831.1 CDS PST_0283 NC_009434.1 332569 334194 R hypothetical protein complement(332569..334194) Pseudomonas stutzeri A1501 5095055 YP_001170832.1 CDS PST_0284 NC_009434.1 334370 335908 R putative protease complement(334370..335908) Pseudomonas stutzeri A1501 5095056 YP_001170833.1 CDS PST_0285 NC_009434.1 336125 336511 D Code: M; COG: COG0818; diacylglycerol kinase 336125..336511 Pseudomonas stutzeri A1501 5095057 YP_001170834.1 CDS ompR NC_009434.1 336626 337360 D part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 336626..337360 Pseudomonas stutzeri A1501 5095058 YP_001170835.1 CDS envZ NC_009434.1 337437 338768 D Code: T; COG: COG0642; osmolarity sensor protein EnvZ 337437..338768 Pseudomonas stutzeri A1501 5095059 YP_001170836.1 CDS rimK NC_009434.1 338791 339696 R Code: HJ; COG: COG0189; ribosomal protein S6 modification protein complement(338791..339696) Pseudomonas stutzeri A1501 5095060 YP_001170837.1 CDS PST_0289 NC_009434.1 339693 340160 R Code: O; COG: COG4067; hypothetical protein complement(339693..340160) Pseudomonas stutzeri A1501 5095061 YP_001170838.1 CDS hslR NC_009434.1 340262 340660 D Code: J; COG: COG1188; heat shock protein 340262..340660 Pseudomonas stutzeri A1501 5095062 YP_001170839.1 CDS PST_0291 NC_009434.1 340657 341448 R Code: I; COG: COG0671; hypothetical protein complement(340657..341448) Pseudomonas stutzeri A1501 5095063 YP_001170840.1 CDS hslO NC_009434.1 341728 342531 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 341728..342531 Pseudomonas stutzeri A1501 5095064 YP_001170841.1 CDS pckA NC_009434.1 342580 344295 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 342580..344295 Pseudomonas stutzeri A1501 5095065 YP_001170842.1 CDS PST_0294 NC_009434.1 344459 345061 D Code: C; COG: COG0778; nitroreductase 344459..345061 Pseudomonas stutzeri A1501 5095066 YP_001170843.1 CDS PST_0295 NC_009434.1 345137 345379 R hypothetical protein complement(345137..345379) Pseudomonas stutzeri A1501 5095067 YP_001170844.1 CDS PST_0296 NC_009434.1 345674 347599 D ATP-dependent DNA helicase domain-containing protein 345674..347599 Pseudomonas stutzeri A1501 5095068 YP_001170845.1 CDS PST_0297 NC_009434.1 347596 349617 R hypothetical protein complement(347596..349617) Pseudomonas stutzeri A1501 5095069 YP_001170846.1 CDS PST_0298 NC_009434.1 349958 351592 D Code: NT; COG: COG0840; chemotaxis transducer 349958..351592 Pseudomonas stutzeri A1501 5095070 YP_001170847.1 CDS PST_0299 NC_009434.1 352043 352960 D Code: R; COG: COG0656; oxidoreductase 352043..352960 Pseudomonas stutzeri A1501 5095071 YP_001170848.1 CDS PST_0300 NC_009434.1 352971 354269 D Code: C; COG: COG3202; transporter 352971..354269 Pseudomonas stutzeri A1501 5095072 YP_001170849.1 CDS PST_0301 NC_009434.1 354330 354752 D ribosomal subunit interface protein 354330..354752 Pseudomonas stutzeri A1501 5095073 YP_001170850.1 CDS PST_0302 NC_009434.1 354864 355424 D hypothetical protein 354864..355424 Pseudomonas stutzeri A1501 5095074 YP_001170851.1 CDS PST_0303 NC_009434.1 355550 356761 D hypothetical protein 355550..356761 Pseudomonas stutzeri A1501 5095075 YP_001170852.1 CDS PST_0304 NC_009434.1 357308 359257 R histidine kinase-response regulator hybrid protein complement(357308..359257) Pseudomonas stutzeri A1501 5095076 YP_001170853.1 CDS PST_0305 NC_009434.1 359247 360116 R Code: T; COG: COG0642; two-component system sensor protein complement(359247..360116) Pseudomonas stutzeri A1501 5094945 YP_001170854.1 CDS PST_0306 NC_009434.1 360109 361119 R two-component system regulatory protein complement(360109..361119) Pseudomonas stutzeri A1501 5094946 YP_001170855.1 CDS PST_0307 NC_009434.1 361116 361934 R hypothetical protein complement(361116..361934) Pseudomonas stutzeri A1501 5094947 YP_001170856.1 CDS PST_0308 NC_009434.1 361879 362640 R positive regulator of sigma-B complement(361879..362640) Pseudomonas stutzeri A1501 5094948 YP_001170857.1 CDS PST_0309 NC_009434.1 362921 363841 R Code: K; COG: COG0583; transcriptional regulator complement(362921..363841) Pseudomonas stutzeri A1501 5094949 YP_001170858.1 CDS PST_0310 NC_009434.1 363922 365160 D Code: I; COG: COG1250; 3-hydroxyacyl-CoA dehydrogenase 363922..365160 Pseudomonas stutzeri A1501 5094950 YP_001170859.1 CDS PST_0311 NC_009434.1 365163 366953 D Code: I; COG: COG1960; acyl-CoA dehydrogenase 365163..366953 Pseudomonas stutzeri A1501 5094951 YP_001170860.1 CDS PST_0312 NC_009434.1 366978 368141 D Code: C; COG: COG1454; iron-containing alcohol dehydrogenase 366978..368141 Pseudomonas stutzeri A1501 5094952 YP_001170861.1 CDS PST_0313 NC_009434.1 368180 368611 D Code: R; COG: COG0824; putative thioesterase 368180..368611 Pseudomonas stutzeri A1501 5094953 YP_001170862.1 CDS PST_0314 NC_009434.1 368683 369288 D hypothetical protein 368683..369288 Pseudomonas stutzeri A1501 5094954 YP_001170863.1 CDS PST_0315 NC_009434.1 369349 370020 R Code: C; COG: COG1526; formate dehydrogenase accessory protein FdhD complement(369349..370020) Pseudomonas stutzeri A1501 5094955 YP_001170864.1 CDS PST_0316 NC_009434.1 370293 372692 R sensory box histidine kinase/response regulator complement(370293..372692) Pseudomonas stutzeri A1501 5094956 YP_001170865.1 CDS PST_0317 NC_009434.1 373015 373695 R Code: R; COG: COG1011; HAD superfamily hydrolase complement(373015..373695) Pseudomonas stutzeri A1501 5094957 YP_001170866.1 CDS nudE NC_009434.1 373811 374377 D ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 373811..374377 Pseudomonas stutzeri A1501 5094958 YP_001170867.1 CDS cysQ NC_009434.1 374374 375192 D Code: P; COG: COG1218; 3'(2'),5'-bisphosphate nucleotidase 374374..375192 Pseudomonas stutzeri A1501 5094959 YP_001170868.1 CDS PST_0320 NC_009434.1 375246 375743 R hypothetical protein complement(375246..375743) Pseudomonas stutzeri A1501 5094960 YP_001170869.1 CDS PST_0322 NC_009434.1 375872 376273 R Code: R; COG: COG0727; Fe-S-cluster oxidoreductase complement(375872..376273) Pseudomonas stutzeri A1501 5094961 YP_001170870.1 CDS PST_0321 NC_009434.1 375929 376378 D hypothetical protein 375929..376378 Pseudomonas stutzeri A1501 5094962 YP_001170871.1 CDS glgP NC_009434.1 376418 378928 D Code: G; COG: COG0058; glycogen phosphorylase 376418..378928 Pseudomonas stutzeri A1501 5094963 YP_001170872.1 CDS fbp NC_009434.1 379112 380122 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 379112..380122 Pseudomonas stutzeri A1501 5094964 YP_001170873.1 CDS PST_0325 NC_009434.1 380126 380728 D Code: S; COG: COG3803; hypothetical protein 380126..380728 Pseudomonas stutzeri A1501 5094965 YP_001170874.1 CDS PST_0326 NC_009434.1 380810 381064 D putative lipoprotein 380810..381064 Pseudomonas stutzeri A1501 5094966 YP_001170875.1 CDS blc NC_009434.1 381090 381623 D Code: M; COG: COG3040; outer membrane lipoprotein Blc 381090..381623 Pseudomonas stutzeri A1501 5094967 YP_001170876.1 CDS PST_0328 NC_009434.1 381646 382071 R hypothetical protein complement(381646..382071) Pseudomonas stutzeri A1501 5094968 YP_001170877.1 CDS pip NC_009434.1 382150 383124 D Code: R; COG: COG0596; proline iminopeptidase 382150..383124 Pseudomonas stutzeri A1501 5094969 YP_001170878.1 CDS dtD NC_009434.1 383121 383558 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 383121..383558 Pseudomonas stutzeri A1501 5094970 YP_001170879.1 CDS PST_0331 NC_009434.1 383562 383981 R hypothetical protein complement(383562..383981) Pseudomonas stutzeri A1501 5094971 YP_001170880.1 CDS PST_0332 NC_009434.1 384168 384875 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(384168..384875) Pseudomonas stutzeri A1501 5094972 YP_001170881.1 CDS tatC NC_009434.1 384872 385675 R Code: U; COG: COG0805; sec-independent protein translocase TatC complement(384872..385675) Pseudomonas stutzeri A1501 5094973 YP_001170882.1 CDS tatB NC_009434.1 385672 386091 R Code: U; COG: COG1826; translocation protein TatB complement(385672..386091) Pseudomonas stutzeri A1501 5094974 YP_001170883.1 CDS tatA NC_009434.1 386159 386389 R Code: U; COG: COG1826; translocation protein TatA complement(386159..386389) Pseudomonas stutzeri A1501 5094975 YP_001170884.1 CDS hisE NC_009434.1 386410 386742 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(386410..386742) Pseudomonas stutzeri A1501 5094976 YP_001170885.1 CDS hisI NC_009434.1 386735 387130 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(386735..387130) Pseudomonas stutzeri A1501 5094977 YP_001170886.1 CDS ubiB NC_009434.1 387180 388787 R Code: R; COG: COG0661; ubiquinone biosynthesis protein UbiB complement(387180..388787) Pseudomonas stutzeri A1501 5094978 YP_001170887.1 CDS PST_0339 NC_009434.1 388784 389407 R Code: S; COG: COG3165; hypothetical protein complement(388784..389407) Pseudomonas stutzeri A1501 5094979 YP_001170888.1 CDS ubiE NC_009434.1 389407 390177 R Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase complement(389407..390177) Pseudomonas stutzeri A1501 5094980 YP_001170889.1 CDS PST_0341 NC_009434.1 390324 390656 R hypothetical protein complement(390324..390656) Pseudomonas stutzeri A1501 5094981 YP_001170890.1 CDS PST_0342 NC_009434.1 390676 392607 R Code: NT; COG: COG0840; methyl-accepting chemotaxis transducer complement(390676..392607) Pseudomonas stutzeri A1501 5094982 YP_001170891.1 CDS PST_0343 NC_009434.1 392909 393283 R Code: S; COG: COG3536; hypothetical protein complement(392909..393283) Pseudomonas stutzeri A1501 5094983 YP_001170892.1 CDS hslU NC_009434.1 393332 394675 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(393332..394675) Pseudomonas stutzeri A1501 5094984 YP_001170893.2 CDS hslV NC_009434.1 394703 395239 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(394703..395239) Pseudomonas stutzeri A1501 5094985 YP_001170894.1 CDS PST_0346 NC_009434.1 395360 397732 R Code: C; COG: COG0243; molybdopterin oxidoreductase subunit alpha complement(395360..397732) Pseudomonas stutzeri A1501 5094986 YP_001170895.1 CDS PST_0347 NC_009434.1 397822 398304 R Code: J; COG: COG0219; RNA methyltransferase complement(397822..398304) Pseudomonas stutzeri A1501 5094987 YP_001170896.1 CDS PST_0348 NC_009434.1 398357 398749 D hypothetical protein 398357..398749 Pseudomonas stutzeri A1501 5094988 YP_001170897.1 CDS ntrC NC_009434.1 398833 400269 R Code: T; COG: COG2204; nitrogen regulation protein NtrC complement(398833..400269) Pseudomonas stutzeri A1501 5094989 YP_001170898.1 CDS ntrB NC_009434.1 400266 401510 R Code: T; COG: COG3852; nitrogen regulation protein NtrB complement(400266..401510) Pseudomonas stutzeri A1501 5094990 YP_001170899.1 CDS PST_0351 NC_009434.1 401518 402147 R hypothetical protein complement(401518..402147) Pseudomonas stutzeri A1501 5094991 YP_001170900.1 CDS PST_0352 NC_009434.1 402144 402698 R hypothetical protein complement(402144..402698) Pseudomonas stutzeri A1501 5094992 YP_001170901.1 CDS glnA NC_009434.1 402863 404269 R Code: E; COG: COG0174; glutamine synthetase complement(402863..404269) Pseudomonas stutzeri A1501 5094993 YP_001170902.1 CDS thiI NC_009434.1 404505 406064 D Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 404505..406064 Pseudomonas stutzeri A1501 5094994 YP_001170903.1 CDS typA NC_009434.1 406232 408052 D Code: T; COG: COG1217; GTP-binding protein TypA 406232..408052 Pseudomonas stutzeri A1501 5094995 YP_001170904.1 CDS PST_0356 NC_009434.1 408380 410017 D Code: NT; COG: COG0840; methyl-accepting chemotaxis protein 408380..410017 Pseudomonas stutzeri A1501 5094996 YP_001170905.1 CDS PST_0357 NC_009434.1 410093 411406 R Code: C; COG: COG3493; sodium-dependent citrate transporter (symport system) complement(410093..411406) Pseudomonas stutzeri A1501 5094997 YP_001170906.1 CDS PST_0358 NC_009434.1 411674 413281 D Code: T; COG: COG3290; two-component sensor kinase 411674..413281 Pseudomonas stutzeri A1501 5094998 YP_001170907.1 CDS PST_0359 NC_009434.1 413278 414003 D Code: KT; COG: COG4565; two-component response regulator 413278..414003 Pseudomonas stutzeri A1501 5094999 YP_001170908.1 CDS PST_0360 NC_009434.1 414077 414616 R Code: S; COG: COG4731; hypothetical protein complement(414077..414616) Pseudomonas stutzeri A1501 5095000 YP_001170909.1 CDS PST_0361 NC_009434.1 415001 415867 D Code: R; COG: COG0596; epoxide hydrolase 415001..415867 Pseudomonas stutzeri A1501 5095001 YP_001170910.1 CDS PST_0362 NC_009434.1 415836 416333 D hypothetical protein 415836..416333 Pseudomonas stutzeri A1501 5095002 YP_001170911.1 CDS PST_0363 NC_009434.1 416568 418046 D hypothetical protein 416568..418046 Pseudomonas stutzeri A1501 5095003 YP_001170912.1 CDS PST_0364 NC_009434.1 418039 419427 D Code: T; COG: COG2204; mutant NtrC-like activator 418039..419427 Pseudomonas stutzeri A1501 5095004 YP_001170913.1 CDS PST_0365 NC_009434.1 419491 419949 D Code: S; COG: COG4807; hypothetical protein 419491..419949 Pseudomonas stutzeri A1501 5095005 YP_001170914.1 CDS PST_0366 NC_009434.1 420102 421370 D Code: G; COG: COG2133; L-sorbosone dehydrogenase 420102..421370 Pseudomonas stutzeri A1501 5095006 YP_001170915.1 CDS PST_0367 NC_009434.1 421427 421768 D hypothetical protein 421427..421768 Pseudomonas stutzeri A1501 5095007 YP_001170916.1 CDS PST_0368 NC_009434.1 421839 422513 D Code: S; COG: COG3342; hypothetical protein 421839..422513 Pseudomonas stutzeri A1501 5095008 YP_001170917.1 CDS PST_0369 NC_009434.1 422530 423009 R chaperone ATPase complement(422530..423009) Pseudomonas stutzeri A1501 5095009 YP_001170918.1 CDS PST_0370 NC_009434.1 423136 425502 R c-di-GMP phosphodiesterase A-related protein complement(423136..425502) Pseudomonas stutzeri A1501 5095010 YP_001170919.1 CDS PST_0371 NC_009434.1 425489 426574 R Code: E; COG: COG0687; spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein complement(425489..426574) Pseudomonas stutzeri A1501 5095011 YP_001170920.1 CDS PST_0372 NC_009434.1 426795 427463 D Code: R; COG: COG1926; phosphoribosyl transferase domain-containing protein 426795..427463 Pseudomonas stutzeri A1501 5095012 YP_001170921.1 CDS PST_0373 NC_009434.1 427460 428113 D hydrolase or acyltransferase 427460..428113 Pseudomonas stutzeri A1501 5095013 YP_001170922.1 CDS PST_0374 NC_009434.1 428227 428655 D hypothetical protein 428227..428655 Pseudomonas stutzeri A1501 5095014 YP_001170923.1 CDS PST_0375 NC_009434.1 428650 429657 R Code: P; COG: COG0003; arsenical pump-driving ATPase complement(428650..429657) Pseudomonas stutzeri A1501 5095015 YP_001170924.1 CDS PST_0376 NC_009434.1 429648 429914 R superfamily II DNA helicase complement(429648..429914) Pseudomonas stutzeri A1501 5095016 YP_001170925.1 CDS cstA NC_009434.1 429911 431587 R Code: T; COG: COG1966; carbon starvation protein CstA complement(429911..431587) Pseudomonas stutzeri A1501 5094872 YP_001170926.1 CDS PST_0378 NC_009434.1 431852 432343 D Code: P; COG: COG1863; hypothetical protein 431852..432343 Pseudomonas stutzeri A1501 5094873 YP_001170927.1 CDS PST_0379 NC_009434.1 432343 432594 D Code: P; COG: COG2212; potassium efflux system protein 432343..432594 Pseudomonas stutzeri A1501 5094874 YP_001170928.1 CDS PST_0380 NC_009434.1 432587 432880 D Code: P; COG: COG1320; hypothetical protein 432587..432880 Pseudomonas stutzeri A1501 5094875 YP_001170929.1 CDS PST_0381 NC_009434.1 432873 433781 D hypothetical protein 432873..433781 Pseudomonas stutzeri A1501 5094876 YP_001170930.1 CDS PST_0382 NC_009434.1 433778 434059 D Code: P; COG: COG1006; hypothetical protein 433778..434059 Pseudomonas stutzeri A1501 5094877 YP_001170931.1 CDS PST_0383 NC_009434.1 434056 435480 D NADH dehydrogenase 434056..435480 Pseudomonas stutzeri A1501 5094878 YP_001170932.1 CDS PST_0384 NC_009434.1 435477 436973 D Code: CP; COG: COG0651; putative NADH dehydrogenase I chain M 435477..436973 Pseudomonas stutzeri A1501 5094879 YP_001170933.1 CDS PST_0385 NC_009434.1 436970 438619 D hypothetical protein 436970..438619 Pseudomonas stutzeri A1501 5094880 YP_001170934.1 CDS PST_0386 NC_009434.1 438650 440293 R Code: NT; COG: COG0840; methyl-accepting chemotaxis transducer complement(438650..440293) Pseudomonas stutzeri A1501 5094881 YP_001170935.1 CDS PST_0387 NC_009434.1 440506 440949 R hypothetical protein complement(440506..440949) Pseudomonas stutzeri A1501 5094882 YP_001170936.1 CDS phoQ NC_009434.1 441026 442486 R Code: T; COG: COG0642; two-component sensor PhoQ complement(441026..442486) Pseudomonas stutzeri A1501 5094883 YP_001170937.1 CDS phoP NC_009434.1 442420 443097 R Code: TK; COG: COG0745; two-component response regulator PhoP complement(442420..443097) Pseudomonas stutzeri A1501 5094884 YP_001170938.1 CDS oprH NC_009434.1 443173 443637 R outer membrane protein H1 complement(443173..443637) Pseudomonas stutzeri A1501 5094885 YP_001170939.1 CDS PST_0391 NC_009434.1 443912 444322 R hypothetical protein complement(443912..444322) Pseudomonas stutzeri A1501 5094886 YP_001170940.1 CDS PST_0392 NC_009434.1 444367 445248 R hypothetical protein complement(444367..445248) Pseudomonas stutzeri A1501 5094887 YP_001170941.1 CDS PST_0393 NC_009434.1 445266 445880 R curli fiber surface-exposed nucleator CsgB complement(445266..445880) Pseudomonas stutzeri A1501 5094888 YP_001170942.1 CDS corR NC_009434.1 445952 446608 R DNA-binding response regulator CorR complement(445952..446608) Pseudomonas stutzeri A1501 5094889 YP_001170943.1 CDS PST_0395 NC_009434.1 446799 448511 D OPT family oligopeptide transporter 446799..448511 Pseudomonas stutzeri A1501 5094890 YP_001170944.1 CDS PST_0396 NC_009434.1 448581 449651 D Code: R; COG: COG0628; hypothetical protein 448581..449651 Pseudomonas stutzeri A1501 5094891 YP_001170945.1 CDS PST_0397 NC_009434.1 449684 450274 R hypothetical protein complement(449684..450274) Pseudomonas stutzeri A1501 5094892 YP_001170946.1 CDS serA NC_009434.1 450675 452081 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(450675..452081) Pseudomonas stutzeri A1501 5094893 YP_001170947.1 CDS PST_0399 NC_009434.1 452104 453498 D Code: C; COG: COG0277; oxidoreductase, FAD-binding 452104..453498 Pseudomonas stutzeri A1501 5094894 YP_001170948.1 CDS PST_0400 NC_009434.1 453526 454191 D Code: Q; COG: COG0179; fumarylacetoacetate hydrolase family protein 453526..454191 Pseudomonas stutzeri A1501 5094895 YP_001170949.1 CDS PST_0401 NC_009434.1 454224 455189 D Code: S; COG: COG3204; hypothetical protein 454224..455189 Pseudomonas stutzeri A1501 5094896 YP_001170950.1 CDS PST_0402 NC_009434.1 455276 456163 D Code: S; COG: COG3204; hypothetical protein 455276..456163 Pseudomonas stutzeri A1501 5094897 YP_001170951.1 CDS PST_0403 NC_009434.1 456197 456466 R hypothetical protein complement(456197..456466) Pseudomonas stutzeri A1501 5094898 YP_001170952.1 CDS rpiA NC_009434.1 456633 457304 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(456633..457304) Pseudomonas stutzeri A1501 5094899 YP_001170953.1 CDS ilvA-2 NC_009434.1 457471 458985 D threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 457471..458985 Pseudomonas stutzeri A1501 5094900 YP_001170954.1 CDS PST_0406 NC_009434.1 459006 459434 D Code: S; COG: COG5528; hypothetical protein 459006..459434 Pseudomonas stutzeri A1501 5094901 YP_001170955.1 CDS PST_0407 NC_009434.1 459435 460661 R Code: GEPR; COG: COG0477; MFS family transporter complement(459435..460661) Pseudomonas stutzeri A1501 5094902 YP_001170956.1 CDS PST_0408 NC_009434.1 460776 461432 R Code: E; COG: COG0560; HAD superfamily hydrolase complement(460776..461432) Pseudomonas stutzeri A1501 5094903 YP_001170957.1 CDS PST_0409 NC_009434.1 461626 462105 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 461626..462105 Pseudomonas stutzeri A1501 5094904 YP_001170958.1 CDS ptsP NC_009434.1 462131 464404 D Code: T; COG: COG3605; phosphoenolpyruvate-protein phosphotransferase PtsP 462131..464404 Pseudomonas stutzeri A1501 5094905 YP_001170959.1 CDS PST_0411 NC_009434.1 464426 465181 R Code: S; COG: COG3332; hypothetical protein complement(464426..465181) Pseudomonas stutzeri A1501 5094906 YP_001170960.1 CDS PST_0412 NC_009434.1 465197 466108 D Code: R; COG: COG0730; hypothetical protein 465197..466108 Pseudomonas stutzeri A1501 5094907 YP_001170961.1 CDS lgt NC_009434.1 466119 466919 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 466119..466919 Pseudomonas stutzeri A1501 5094908 YP_001170962.1 CDS thyA NC_009434.1 467001 467819 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 467001..467819 Pseudomonas stutzeri A1501 5094909 YP_001170963.1 CDS PST_0415 NC_009434.1 468050 468823 D Code: D; COG: COG1192; ParA family protein 468050..468823 Pseudomonas stutzeri A1501 5094910 YP_001170964.1 CDS PST_0416 NC_009434.1 468829 469815 R Code: E; COG: COG4177; ABC transporter permease complement(468829..469815) Pseudomonas stutzeri A1501 5094911 YP_001170965.1 CDS PST_0417 NC_009434.1 469815 470702 R Code: E; COG: COG0559; branched-chain amino acid ABC transporter permease complement(469815..470702) Pseudomonas stutzeri A1501 5094912 YP_001170966.1 CDS PST_0418 NC_009434.1 470702 471406 R Code: E; COG: COG0410; branched-chain amino acid ABC transporter ATP-binding protein LivF complement(470702..471406) Pseudomonas stutzeri A1501 5094913 YP_001170967.1 CDS PST_0419 NC_009434.1 471399 472199 R Code: E; COG: COG0411; branched-chain amino acid ABC transporter ATP-binding protein complement(471399..472199) Pseudomonas stutzeri A1501 5094914 YP_001170968.1 CDS PST_0420 NC_009434.1 472196 473401 R Code: E; COG: COG0683; branched-chain amino acid ABC transporter substrate-binding protein complement(472196..473401) Pseudomonas stutzeri A1501 5094915 YP_001170969.1 CDS PST_0421 NC_009434.1 473805 474602 R Code: T; COG: COG0589; hypothetical protein complement(473805..474602) Pseudomonas stutzeri A1501 5094916 YP_001170970.1 CDS PST_0422 NC_009434.1 474801 475715 D Code: T; COG: COG0784; two-component response regulator 474801..475715 Pseudomonas stutzeri A1501 5094917 YP_001170971.1 CDS PST_0423 NC_009434.1 475880 476755 D Code: M; COG: COG0739; M24/M37 family peptidase 475880..476755 Pseudomonas stutzeri A1501 5094918 YP_001170972.1 CDS PST_0424 NC_009434.1 476808 477569 R hypothetical protein complement(476808..477569) Pseudomonas stutzeri A1501 5094919 YP_001170973.1 CDS PST_0425 NC_009434.1 477763 479106 R Code: R; COG: COG1253; metal ion transporter complement(477763..479106) Pseudomonas stutzeri A1501 5094920 YP_001170974.1 CDS phoR NC_009434.1 479208 480509 R Code: T; COG: COG0642; two-component sensor PhoR complement(479208..480509) Pseudomonas stutzeri A1501 5094921 YP_001170975.1 CDS phoB NC_009434.1 480578 481267 R Code: TK; COG: COG0745; DNA-binding response regulator PhoB complement(480578..481267) Pseudomonas stutzeri A1501 5094922 YP_001170976.1 CDS ubiA NC_009434.1 481386 482279 R catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase complement(481386..482279) Pseudomonas stutzeri A1501 5094923 YP_001170977.1 CDS PST_0429 NC_009434.1 482323 482877 R Code: H; COG: COG3161; chorismate-pyruvate lyase complement(482323..482877) Pseudomonas stutzeri A1501 5094924 YP_001170978.1 CDS glcC NC_009434.1 482986 483759 R Code: K; COG: COG2186; DNA-binding transcriptional regulator GlcC complement(482986..483759) Pseudomonas stutzeri A1501 5094925 YP_001170979.1 CDS glcD NC_009434.1 483992 485491 D Code: C; COG: COG0277; glycolate oxidase subunit GlcD 483992..485491 Pseudomonas stutzeri A1501 5094926 YP_001170980.1 CDS glcE NC_009434.1 485491 486552 D Code: C; COG: COG0277; glycolate oxidase FAD binding subunit 485491..486552 Pseudomonas stutzeri A1501 5094927 YP_001170981.1 CDS glcF NC_009434.1 486559 487776 D Code: C; COG: COG0247; glycolate oxidase iron-sulfur subunit 486559..487776 Pseudomonas stutzeri A1501 5094928 YP_001170982.1 CDS glcG NC_009434.1 487850 488254 D Code: R; COG: COG3193; glcG protein 487850..488254 Pseudomonas stutzeri A1501 5094929 YP_001170983.1 CDS PST_0435 NC_009434.1 488275 490455 D catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 488275..490455 Pseudomonas stutzeri A1501 5094930 YP_001170984.1 CDS PST_0436 NC_009434.1 490672 492375 D Code: C; COG: COG1620; L-lactate permease 490672..492375 Pseudomonas stutzeri A1501 5094931 YP_001170985.1 CDS rubA NC_009434.1 492490 492657 D Code: C; COG: COG1773; rubredoxin 492490..492657 Pseudomonas stutzeri A1501 5094932 YP_001170986.1 CDS rubB NC_009434.1 492693 493877 D Code: R; COG: COG0446; rubredoxin reductase 492693..493877 Pseudomonas stutzeri A1501 5094933 YP_001170987.1 CDS hupA NC_009434.1 493982 494299 D Code: L; COG: COG0776; HU family DNA-binding protein 493982..494299 Pseudomonas stutzeri A1501 5094934 YP_001170988.1 CDS PST_0440 NC_009434.1 494442 494816 D hypothetical protein 494442..494816 Pseudomonas stutzeri A1501 5094935 YP_001170989.1 CDS PST_0441 NC_009434.1 494964 495866 R Code: K; COG: COG0583; transcriptional regulator complement(494964..495866) Pseudomonas stutzeri A1501 5094936 YP_001170990.1 CDS gcdH NC_009434.1 496041 497222 D Code: I; COG: COG1960; glutaryl-CoA dehydrogenase 496041..497222 Pseudomonas stutzeri A1501 5094937 YP_001170991.1 CDS PST_0443 NC_009434.1 497288 498511 D Code: C; COG: COG1804; putative lipid metabolism-related protein 497288..498511 Pseudomonas stutzeri A1501 5094938 YP_001170992.1 CDS PST_0444 NC_009434.1 498529 499542 R Code: CR; COG: COG0604; zinc-containing alcohol dehydrogenase complement(498529..499542) Pseudomonas stutzeri A1501 5094939 YP_001170993.1 CDS PST_0445 NC_009434.1 499920 500591 D Code: K; COG: COG0583; transcriptional regulator 499920..500591 Pseudomonas stutzeri A1501 5094940 YP_001170994.1 CDS PST_0446 NC_009434.1 500560 501261 D Code: S; COG: COG1704; cytoplasmic membrane protein 500560..501261 Pseudomonas stutzeri A1501 5094941 YP_001170995.1 CDS PST_0447 NC_009434.1 501258 502010 D Code: R; COG: COG1512; hypothetical protein 501258..502010 Pseudomonas stutzeri A1501 5094942 YP_001170996.1 CDS PST_0448 NC_009434.1 502029 502646 D Code: S; COG: COG3762; hypothetical protein 502029..502646 Pseudomonas stutzeri A1501 5094943 YP_001170997.1 CDS PST_0449 NC_009434.1 502698 503975 R hypothetical protein complement(502698..503975) Pseudomonas stutzeri A1501 5094944 YP_001170998.1 CDS PST_0450 NC_009434.1 504487 505176 D Code: K; COG: COG4977; AraC family transcriptional regulator 504487..505176 Pseudomonas stutzeri A1501 5094800 YP_001170999.1 CDS PST_0452 NC_009434.1 505203 507572 R hypothetical protein complement(505203..507572) Pseudomonas stutzeri A1501 5094801 YP_001171000.1 CDS PST_0451 NC_009434.1 507519 508439 D Code: ET; COG: COG0834; hypothetical protein 507519..508439 Pseudomonas stutzeri A1501 5094802 YP_001171001.1 CDS PST_0453 NC_009434.1 508475 509704 R Code: C; COG: COG2010; cytochrome c family protein complement(508475..509704) Pseudomonas stutzeri A1501 5094803 YP_001171002.1 CDS PST_0454 NC_009434.1 509716 511914 R Code: C; COG: COG1529; isoquinoline 1-oxidoreductase subunit beta complement(509716..511914) Pseudomonas stutzeri A1501 5094804 YP_001171003.1 CDS PST_0455 NC_009434.1 511926 512378 R Code: C; COG: COG2080; isoquinoline 1-oxidoreductase subunit alpha complement(511926..512378) Pseudomonas stutzeri A1501 5094805 YP_001171004.1 CDS PST_0456 NC_009434.1 512427 513101 D hypothetical protein 512427..513101 Pseudomonas stutzeri A1501 5094806 YP_001171005.1 CDS PST_0457 NC_009434.1 513137 513676 D outer membrane protein 513137..513676 Pseudomonas stutzeri A1501 5094807 YP_001171006.1 CDS PST_0458 NC_009434.1 513717 514097 R Code: J; COG: COG0251; endoribonuclease complement(513717..514097) Pseudomonas stutzeri A1501 5094808 YP_001171007.1 CDS spoT NC_009434.1 514202 516310 R Code: TK; COG: COG0317; guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase complement(514202..516310) Pseudomonas stutzeri A1501 5094809 YP_001171008.1 CDS rpoZ NC_009434.1 516371 516634 R Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(516371..516634) Pseudomonas stutzeri A1501 5094810 YP_001171009.1 CDS gmk NC_009434.1 516754 517374 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(516754..517374) Pseudomonas stutzeri A1501 5094811 YP_001171010.1 CDS PST_0462 NC_009434.1 517436 518299 R Code: S; COG: COG1561; hypothetical protein complement(517436..518299) Pseudomonas stutzeri A1501 5094812 YP_001171011.1 CDS rph NC_009434.1 518449 519171 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 518449..519171 Pseudomonas stutzeri A1501 5094813 YP_001171012.1 CDS PST_0464 NC_009434.1 519188 519556 D Code: S; COG: COG3296; hypothetical protein 519188..519556 Pseudomonas stutzeri A1501 5094814 YP_001171013.1 CDS crc NC_009434.1 519630 520409 R Code: L; COG: COG0708; catabolite repression control protein complement(519630..520409) Pseudomonas stutzeri A1501 5094815 YP_001171014.1 CDS pyrE NC_009434.1 520495 521142 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 520495..521142 Pseudomonas stutzeri A1501 5094816 YP_001171015.1 CDS PST_0467 NC_009434.1 521162 521755 D hypothetical protein 521162..521755 Pseudomonas stutzeri A1501 5094817 YP_001171016.1 CDS PST_0468 NC_009434.1 521962 523437 D putative integral membrane protein 521962..523437 Pseudomonas stutzeri A1501 5094818 YP_001171017.1 CDS argB NC_009434.1 523494 524396 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(523494..524396) Pseudomonas stutzeri A1501 5094819 YP_001171018.1 CDS PST_0470 NC_009434.1 524413 526983 R phosphomannomutase complement(524413..526983) Pseudomonas stutzeri A1501 5094820 YP_001171019.1 CDS dut NC_009434.1 527028 527483 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(527028..527483) Pseudomonas stutzeri A1501 5094821 YP_001171020.1 CDS coaBC NC_009434.1 527485 528693 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(527485..528693) Pseudomonas stutzeri A1501 5094822 YP_001171021.1 CDS radC NC_009434.1 528831 529505 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 528831..529505 Pseudomonas stutzeri A1501 5094823 YP_001171022.1 CDS PST_0474 NC_009434.1 529512 530840 R hypothetical protein complement(529512..530840) Pseudomonas stutzeri A1501 5094824 YP_001171023.1 CDS PST_0475 NC_009434.1 530844 531272 R Code: Q; COG: COG2050; thioesterase family protein complement(530844..531272) Pseudomonas stutzeri A1501 5094825 YP_001171024.1 CDS paaC NC_009434.1 531388 532911 D Code: I; COG: COG1250; 3-hydroxyacyl-CoA dehydrogenase 531388..532911 Pseudomonas stutzeri A1501 5094826 YP_001171025.1 CDS PST_0477 NC_009434.1 533083 534645 D Code: NT; COG: COG0840; chemotaxis transducer 533083..534645 Pseudomonas stutzeri A1501 5094827 YP_001171026.1 CDS PST_0478 NC_009434.1 534747 535271 D Code: S; COG: COG4539; hypothetical protein 534747..535271 Pseudomonas stutzeri A1501 5094828 YP_001171027.1 CDS PST_0479 NC_009434.1 535278 536015 R hypothetical protein complement(535278..536015) Pseudomonas stutzeri A1501 5094829 YP_001171028.1 CDS PST_0480 NC_009434.1 536218 537735 R Code: I; COG: COG1502; phospholipase D complement(536218..537735) Pseudomonas stutzeri A1501 5094830 YP_001171029.1 CDS PST_0481 NC_009434.1 537826 539196 R Code: E; COG: COG0665; oxidoreductase complement(537826..539196) Pseudomonas stutzeri A1501 5094831 YP_001171030.1 CDS lrp NC_009434.1 539264 539752 R Code: K; COG: COG1522; leucine-responsive regulatory protein complement(539264..539752) Pseudomonas stutzeri A1501 5094832 YP_001171031.1 CDS dadA NC_009434.1 539900 541198 D catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 539900..541198 Pseudomonas stutzeri A1501 5094833 YP_001171032.1 CDS PST_0484 NC_009434.1 541660 542208 D Code: K; COG: COG1396; transcriptional regulator 541660..542208 Pseudomonas stutzeri A1501 5094834 YP_001171033.1 CDS cycB NC_009434.1 542368 542793 D Code: C; COG: COG3245; cytochrome c5 542368..542793 Pseudomonas stutzeri A1501 5094835 YP_001171034.1 CDS PST_0486 NC_009434.1 542927 543463 D Code: S; COG: COG4297; double-stranded beta helix domain-containing protein 542927..543463 Pseudomonas stutzeri A1501 5094836 YP_001171035.1 CDS xpt NC_009434.1 543481 544122 R Code: F; COG: COG0503; xanthine phosphoribosyltransferase complement(543481..544122) Pseudomonas stutzeri A1501 5094837 YP_001171036.1 CDS PST_0488 NC_009434.1 544190 544774 R hypothetical protein complement(544190..544774) Pseudomonas stutzeri A1501 5094838 YP_001171037.1 CDS PST_0489 NC_009434.1 544784 546406 R Code: G; COG: COG0366; putative trehalose synthase protein complement(544784..546406) Pseudomonas stutzeri A1501 5094839 YP_001171038.1 CDS PST_0490 NC_009434.1 546409 547944 R Code: G; COG: COG0366; oligo-1,6-glucosidase complement(546409..547944) Pseudomonas stutzeri A1501 5094840 YP_001171039.1 CDS PST_0491 NC_009434.1 548131 549141 D Code: G; COG: COG0057; glyceraldehyde 3-phosphate dehydrogenase 548131..549141 Pseudomonas stutzeri A1501 5094841 YP_001171040.1 CDS PST_0492 NC_009434.1 549138 549821 D Code: E; COG: COG3404; hypothetical protein 549138..549821 Pseudomonas stutzeri A1501 5094842 YP_001171041.1 CDS PST_0493 NC_009434.1 549886 551052 D Code: C; COG: COG1454; iron-containing alcohol dehydrogenase 549886..551052 Pseudomonas stutzeri A1501 5094843 YP_001171042.1 CDS mmsA-1 NC_009434.1 551057 552559 D Code: C; COG: COG1012; methylmalonate-semialdehyde dehydrogenase 551057..552559 Pseudomonas stutzeri A1501 5094844 YP_001171043.1 CDS PST_0495 NC_009434.1 552651 553445 D transcriptional regulator 552651..553445 Pseudomonas stutzeri A1501 5094845 YP_001171044.1 CDS PST_0496 NC_009434.1 553433 554050 R Code: R; COG: COG1272; hemolysin III family channel protein complement(553433..554050) Pseudomonas stutzeri A1501 5094846 YP_001171045.1 CDS rep NC_009434.1 554147 556123 R Code: L; COG: COG0210; ATP-dependent DNA helicase Rep complement(554147..556123) Pseudomonas stutzeri A1501 5094847 YP_001171046.1 CDS PST_0498 NC_009434.1 556401 558038 D diguanylate cyclase 556401..558038 Pseudomonas stutzeri A1501 5094848 YP_001171047.1 CDS PST_0499 NC_009434.1 558078 560051 R Code: M; COG: COG1292; choline transporter complement(558078..560051) Pseudomonas stutzeri A1501 5094849 YP_001171048.1 CDS PST_0500 NC_009434.1 560181 561677 R Code: O; COG: COG0606; magnesium chelatase subunit D/I family protein complement(560181..561677) Pseudomonas stutzeri A1501 5094850 YP_001171049.1 CDS PST_0501 NC_009434.1 561714 562199 R hypothetical protein complement(561714..562199) Pseudomonas stutzeri A1501 5094851 YP_001171050.1 CDS glnK NC_009434.1 562371 562709 D Code: E; COG: COG0347; nitrogen regulatory protein P-II 562371..562709 Pseudomonas stutzeri A1501 5094852 YP_001171051.1 CDS amtB1 NC_009434.1 562748 564064 D Code: P; COG: COG0004; ammonium transporter 562748..564064 Pseudomonas stutzeri A1501 5094853 YP_001171052.1 CDS amtB2 NC_009434.1 564256 565431 D Code: P; COG: COG0004; ammonium transporter 564256..565431 Pseudomonas stutzeri A1501 5094854 YP_001171053.1 CDS PST_0505 NC_009434.1 565533 565958 D Code: S; COG: COG0432; hypothetical protein 565533..565958 Pseudomonas stutzeri A1501 5094855 YP_001171054.1 CDS PST_0506 NC_009434.1 566036 566365 D hypothetical protein 566036..566365 Pseudomonas stutzeri A1501 5094856 YP_001171055.1 CDS PST_0507 NC_009434.1 566435 567136 R Code: R; COG: COG1011; HAD superfamily hydrolase complement(566435..567136) Pseudomonas stutzeri A1501 5094857 YP_001171056.1 CDS xerC NC_009434.1 567133 568032 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(567133..568032) Pseudomonas stutzeri A1501 5094858 YP_001171057.1 CDS PST_0509 NC_009434.1 568089 568781 R Code: S; COG: COG3159; hypothetical protein complement(568089..568781) Pseudomonas stutzeri A1501 5094859 YP_001171058.1 CDS dapF NC_009434.1 568778 569608 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(568778..569608) Pseudomonas stutzeri A1501 5094860 YP_001171059.1 CDS lysA NC_009434.1 569619 570866 R Code: E; COG: COG0019; diaminopimelate decarboxylase complement(569619..570866) Pseudomonas stutzeri A1501 5094861 YP_001171060.1 CDS lppL NC_009434.1 570879 571067 R Code: N; COG: COG5567; lipopeptide LppL complement(570879..571067) Pseudomonas stutzeri A1501 5094862 YP_001171061.1 CDS cyaY NC_009434.1 571207 571539 D defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 571207..571539 Pseudomonas stutzeri A1501 5094863 YP_001171062.1 CDS rnk NC_009434.1 571700 572104 D Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 571700..572104 Pseudomonas stutzeri A1501 5094864 YP_001171063.1 CDS PST_0515 NC_009434.1 572188 572430 R hypothetical protein complement(572188..572430) Pseudomonas stutzeri A1501 5094865 YP_001171064.1 CDS cyaA NC_009434.1 572445 575261 R catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase complement(572445..575261) Pseudomonas stutzeri A1501 5094866 YP_001171065.1 CDS PST_0517 NC_009434.1 575412 575657 R hypothetical protein complement(575412..575657) Pseudomonas stutzeri A1501 5094867 YP_001171066.1 CDS PST_0518 NC_009434.1 575736 576176 R hypothetical protein complement(575736..576176) Pseudomonas stutzeri A1501 5094868 YP_001171067.1 CDS PST_0519 NC_009434.1 576247 576774 R hypothetical protein complement(576247..576774) Pseudomonas stutzeri A1501 5094869 YP_001171068.1 CDS PST_0520 NC_009434.1 576852 578000 R Code: P; COG: COG3213; hypothetical protein complement(576852..578000) Pseudomonas stutzeri A1501 5094870 YP_001171069.1 CDS argH NC_009434.1 578056 579450 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(578056..579450) Pseudomonas stutzeri A1501 5094871 YP_001171070.1 CDS PST_0522 NC_009434.1 579762 580715 D Code: T; COG: COG2972; alginate biosynthesis protein AlgZ/FimS 579762..580715 Pseudomonas stutzeri A1501 5094749 YP_001171071.1 CDS algR NC_009434.1 580664 581458 D Code: KT; COG: COG3279; alginate biosynthesis regulatory protein AlgR 580664..581458 Pseudomonas stutzeri A1501 5094750 YP_001171072.1 CDS hemC NC_009434.1 581608 582552 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 581608..582552 Pseudomonas stutzeri A1501 5094751 YP_001171073.1 CDS hemD NC_009434.1 582549 583319 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; uroporphyrinogen-III synthase 582549..583319 Pseudomonas stutzeri A1501 5094752 YP_001171074.1 CDS PST_0526 NC_009434.1 583258 584520 D Code: H; COG: COG2959; uroporphyrin-III C-methyltransferase 583258..584520 Pseudomonas stutzeri A1501 5094753 YP_001171075.1 CDS hemY NC_009434.1 584517 585737 D Code: H; COG: COG3071; HemY protein 584517..585737 Pseudomonas stutzeri A1501 5094754 YP_001171076.1 CDS dsbH NC_009434.1 585856 586347 D Code: O; COG: COG1495; disulfide bond formation protein 585856..586347 Pseudomonas stutzeri A1501 5094755 YP_001171077.1 CDS algQ NC_009434.1 586611 587072 D binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 586611..587072 Pseudomonas stutzeri A1501 5094756 YP_001171078.1 CDS algP NC_009434.1 587177 588034 D alginate regulatory protein AlgP 587177..588034 Pseudomonas stutzeri A1501 5094757 YP_001171079.1 CDS PST_0531 NC_009434.1 588010 588486 R Code: S; COG: COG5589; hypothetical protein complement(588010..588486) Pseudomonas stutzeri A1501 5094758 YP_001171080.1 CDS PST_0532 NC_009434.1 588556 590466 D Code: R; COG: COG0488; ABC transporter ATP-binding protein 588556..590466 Pseudomonas stutzeri A1501 5094759 YP_001171081.1 CDS PST_0533 NC_009434.1 590463 591044 D Code: M; COG: COG0668; small-conductance mechanosensitive channel 590463..591044 Pseudomonas stutzeri A1501 5094760 YP_001171082.1 CDS PST_0534 NC_009434.1 591054 591812 D Code: P; COG: COG0861; tellurium resistance protein TerC 591054..591812 Pseudomonas stutzeri A1501 5094761 YP_001171083.1 CDS PST_0535 NC_009434.1 591843 592475 D Code: E; COG: COG1280; amino acid transporter LysE 591843..592475 Pseudomonas stutzeri A1501 5094762 YP_001171084.1 CDS PST_0536 NC_009434.1 592490 592945 D Code: S; COG: COG1671; hypothetical protein 592490..592945 Pseudomonas stutzeri A1501 5094763 YP_001171085.1 CDS PST_0537 NC_009434.1 592920 595052 R diguanylate cyclase complement(592920..595052) Pseudomonas stutzeri A1501 5094764 YP_001171086.1 CDS PST_0538 NC_009434.1 595164 595706 R Code: Q; COG: COG2050; hypothetical protein complement(595164..595706) Pseudomonas stutzeri A1501 5094765 YP_001171087.1 CDS elbB NC_009434.1 595775 596440 R Code: Q; COG: COG3155; isoprenoid biosynthesis protein with amidotransferase-like domain complement(595775..596440) Pseudomonas stutzeri A1501 5094766 YP_001171088.1 CDS hemB NC_009434.1 596743 597756 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 596743..597756 Pseudomonas stutzeri A1501 5094767 YP_001171089.1 CDS ppk NC_009434.1 597777 599993 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 597777..599993 Pseudomonas stutzeri A1501 5094768 YP_001171090.1 CDS ppx NC_009434.1 600049 601551 R Code: FP; COG: COG0248; exopolyphosphatase complement(600049..601551) Pseudomonas stutzeri A1501 5094769 YP_001171091.1 CDS rho NC_009434.1 602295 603554 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 602295..603554 Pseudomonas stutzeri A1501 5094770 YP_001171092.1 CDS PST_0544 NC_009434.1 603678 605144 D Code: H; COG: COG0043; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 603678..605144 Pseudomonas stutzeri A1501 5094771 YP_001171093.1 CDS PST_0545 NC_009434.1 605113 606189 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 605113..606189 Pseudomonas stutzeri A1501 5094772 YP_001171094.1 CDS PST_0546 NC_009434.1 606245 606910 R Code: D; COG: COG3087; hypothetical protein complement(606245..606910) Pseudomonas stutzeri A1501 5094773 YP_001171095.1 CDS argS NC_009434.1 606911 608650 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(606911..608650) Pseudomonas stutzeri A1501 5094774 YP_001171096.1 CDS priA NC_009434.1 608765 611161 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(608765..611161) Pseudomonas stutzeri A1501 5094775 YP_001171097.1 CDS PST_0548 NC_009434.1 611109 612209 D Code: L; COG: COG1525; nuclease 611109..612209 Pseudomonas stutzeri A1501 5094776 YP_001171098.1 CDS maeB NC_009434.1 612351 613619 D Code: C; COG: COG0281; malic enzyme 612351..613619 Pseudomonas stutzeri A1501 5094777 YP_001171099.1 CDS ponA NC_009434.1 613686 615920 R Code: M; COG: COG5009; penicillin-binding protein 1A complement(613686..615920) Pseudomonas stutzeri A1501 5094778 YP_001171100.1 CDS PST_0552 NC_009434.1 616431 617468 R putative transposase complement(616431..617468) Pseudomonas stutzeri A1501 5094779 YP_001171101.1 CDS pilM NC_009434.1 617668 618462 D Code: NU; COG: COG4972; type 4 fimbrial biogenesis protein PilM 617668..618462 Pseudomonas stutzeri A1501 5094780 YP_001171102.1 CDS pilN NC_009434.1 618462 619034 D Code: NU; COG: COG3166; type 4 fimbrial biogenesis protein PilN 618462..619034 Pseudomonas stutzeri A1501 5094781 YP_001171103.1 CDS pilO NC_009434.1 619031 619654 D Code: NU; COG: COG3167; type 4 fimbrial biogenesis protein PilO 619031..619654 Pseudomonas stutzeri A1501 5094782 YP_001171104.1 CDS pilP NC_009434.1 619651 620178 D Code: NU; COG: COG3168; type 4 fimbrial biogenesis protein PilP 619651..620178 Pseudomonas stutzeri A1501 5094783 YP_001171105.1 CDS pilQ NC_009434.1 620193 622331 D Code: U; COG: COG4796; type 4 fimbrial biogenesis protein PilQ 620193..622331 Pseudomonas stutzeri A1501 5094784 YP_001171106.1 CDS aroK NC_009434.1 622416 622883 D Code: E; COG: COG0703; shikimate kinase 622416..622883 Pseudomonas stutzeri A1501 5094785 YP_001171107.1 CDS aroB NC_009434.1 622907 624010 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 622907..624010 Pseudomonas stutzeri A1501 5094786 YP_001171108.1 CDS PST_0560 NC_009434.1 624021 625592 D type II secretory pathway ATPase ExeA 624021..625592 Pseudomonas stutzeri A1501 5094787 YP_001171109.1 CDS gltB NC_009434.1 625766 630214 D catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 625766..630214 Pseudomonas stutzeri A1501 5094788 YP_001171110.1 CDS gltD NC_009434.1 630271 631740 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 630271..631740 Pseudomonas stutzeri A1501 5094789 YP_001171111.1 CDS hemE NC_009434.1 631841 632944 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 631841..632944 Pseudomonas stutzeri A1501 5094790 YP_001171112.1 CDS PST_0565 NC_009434.1 633003 634460 R Code: GEPR; COG: COG0477; major facilitator family transporter complement(633003..634460) Pseudomonas stutzeri A1501 5094791 YP_001171113.1 CDS PST_0564 NC_009434.1 634459 635358 D Code: K; COG: COG0583; LysR family transcriptional regulator 634459..635358 Pseudomonas stutzeri A1501 5094792 YP_001171114.1 CDS PST_0566 NC_009434.1 635367 635657 R hypothetical protein complement(635367..635657) Pseudomonas stutzeri A1501 5094793 YP_001171115.1 CDS trxC NC_009434.1 635735 636172 R Code: OC; COG: COG0526; thioredoxin 2 complement(635735..636172) Pseudomonas stutzeri A1501 5094794 YP_001171116.1 CDS metY NC_009434.1 636241 637518 R catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase complement(636241..637518) Pseudomonas stutzeri A1501 5094795 YP_001171117.1 CDS PST_0569 NC_009434.1 637611 639407 R Code: P; COG: COG0471; sodium/sulfate symporter family transporter complement(637611..639407) Pseudomonas stutzeri A1501 5094796 YP_001171118.1 CDS PST_0570 NC_009434.1 639817 641280 D hypothetical protein 639817..641280 Pseudomonas stutzeri A1501 5094797 YP_001171119.1 CDS PST_0571 NC_009434.1 641930 642586 D hypothetical protein 641930..642586 Pseudomonas stutzeri A1501 5094798 YP_001171120.1 CDS PST_0572 NC_009434.1 642591 643268 D hypothetical protein 642591..643268 Pseudomonas stutzeri A1501 5094799 YP_001171121.1 CDS PST_0573 NC_009434.1 643474 644904 D Code: L; COG: COG3666; hypothetical protein 643474..644904 Pseudomonas stutzeri A1501 5094683 YP_001171122.1 CDS PST_0574 NC_009434.1 645151 646140 R Code: P; COG: COG0798; sodium:bile acid symporter family protein complement(645151..646140) Pseudomonas stutzeri A1501 5094684 YP_001171123.1 CDS PST_0575 NC_009434.1 646564 646878 D hypothetical protein 646564..646878 Pseudomonas stutzeri A1501 5094685 YP_001171124.1 CDS PST_0576 NC_009434.1 647120 647563 D Code: O; COG: COG1495; disulfide bond formation protein 647120..647563 Pseudomonas stutzeri A1501 5094686 YP_001171125.1 CDS PST_0577 NC_009434.1 647732 648169 D hypothetical protein 647732..648169 Pseudomonas stutzeri A1501 5094687 YP_001171126.1 CDS PST_0578 NC_009434.1 648163 649170 R transposase complement(648163..649170) Pseudomonas stutzeri A1501 5094688 YP_001171127.1 CDS PST_0579 NC_009434.1 649194 649517 D GMP synthase 649194..649517 Pseudomonas stutzeri A1501 5094689 YP_001171128.1 CDS PST_0580 NC_009434.1 649875 651389 D Code: L; COG: COG4584; ISPsy14, transposase 649875..651389 Pseudomonas stutzeri A1501 5094690 YP_001171129.1 CDS PST_0581 NC_009434.1 651407 652162 D Code: L; COG: COG1484; ISPsy14, transposition helper protein 651407..652162 Pseudomonas stutzeri A1501 5094691 YP_001171130.1 CDS PST_0582 NC_009434.1 652729 655167 D Code: L; COG: COG1643; ATP-dependent helicase HrpB 652729..655167 Pseudomonas stutzeri A1501 5094692 YP_001171131.1 CDS PST_0583 NC_009434.1 655454 657949 D Code: L; COG: COG1643; ATP-dependent helicase HrpB 655454..657949 Pseudomonas stutzeri A1501 5094693 YP_001171132.1 CDS PST_0584 NC_009434.1 658167 659201 R hypothetical protein complement(658167..659201) Pseudomonas stutzeri A1501 5094694 YP_001171133.1 CDS PST_0585 NC_009434.1 659398 660759 D phage integrase family site specific recombinase 659398..660759 Pseudomonas stutzeri A1501 5094695 YP_001171134.1 CDS PST_0586 NC_009434.1 660752 662686 D hypothetical protein 660752..662686 Pseudomonas stutzeri A1501 5094696 YP_001171135.1 CDS PST_0587 NC_009434.1 662683 664731 D phage integrase family site specific recombinase 662683..664731 Pseudomonas stutzeri A1501 5094697 YP_001171136.1 CDS PST_0588 NC_009434.1 664734 665201 D hypothetical protein 664734..665201 Pseudomonas stutzeri A1501 5094698 YP_001171137.1 CDS PST_0589 NC_009434.1 665372 666295 R hypothetical protein complement(665372..666295) Pseudomonas stutzeri A1501 5094699 YP_001171138.1 CDS PST_0590 NC_009434.1 666411 666701 R hypothetical protein complement(666411..666701) Pseudomonas stutzeri A1501 5094700 YP_001171139.1 CDS PST_0591 NC_009434.1 667142 668665 R hypothetical protein complement(667142..668665) Pseudomonas stutzeri A1501 5094701 YP_001171140.1 CDS PST_0592 NC_009434.1 668716 669672 R Code: K; COG: COG2378; transcriptional regulator complement(668716..669672) Pseudomonas stutzeri A1501 5094702 YP_001171141.1 CDS PST_0593 NC_009434.1 669867 670811 D nucleotidyltransferase 669867..670811 Pseudomonas stutzeri A1501 5094703 YP_001171142.1 CDS PST_0594 NC_009434.1 670808 671299 D hypothetical protein 670808..671299 Pseudomonas stutzeri A1501 5094704 YP_001171143.1 CDS PST_0595 NC_009434.1 671296 672192 D AAA ATPase 671296..672192 Pseudomonas stutzeri A1501 5094705 YP_001171144.1 CDS PST_0596 NC_009434.1 672344 672901 D hypothetical protein 672344..672901 Pseudomonas stutzeri A1501 5094706 YP_001171145.1 CDS PST_0597 NC_009434.1 673073 673315 D hypothetical protein 673073..673315 Pseudomonas stutzeri A1501 5094707 YP_001171146.1 CDS PST_0598 NC_009434.1 673487 674290 R transposase complement(673487..674290) Pseudomonas stutzeri A1501 5094708 YP_001171147.1 CDS PST_0599 NC_009434.1 674283 675755 R transposase complement(674283..675755) Pseudomonas stutzeri A1501 5094709 YP_001171148.1 CDS PST_0600 NC_009434.1 675875 676264 R hypothetical protein complement(675875..676264) Pseudomonas stutzeri A1501 5094710 YP_001171149.1 CDS PST_0601 NC_009434.1 676412 677683 R hypothetical protein complement(676412..677683) Pseudomonas stutzeri A1501 5094711 YP_001171150.1 CDS PST_0602 NC_009434.1 677837 680290 R hypothetical protein complement(677837..680290) Pseudomonas stutzeri A1501 5094712 YP_001171151.1 CDS PST_0603 NC_009434.1 680311 680553 R hypothetical protein complement(680311..680553) Pseudomonas stutzeri A1501 5094713 YP_001171152.1 CDS fadD NC_009434.1 680648 682057 R Code: IQ; COG: COG0318; long-chain-fatty-acid-CoA ligase complement(680648..682057) Pseudomonas stutzeri A1501 5094714 YP_001171153.1 CDS PST_0605 NC_009434.1 682281 683057 R Code: IQR; COG: COG1028; 3-hydroxyacyl-CoA dehydrogenase complement(682281..683057) Pseudomonas stutzeri A1501 5094715 YP_001171154.1 CDS PST_0606 NC_009434.1 683130 684287 R Code: I; COG: COG1960; acyl-CoA dehydrogenase complement(683130..684287) Pseudomonas stutzeri A1501 5094716 YP_001171155.1 CDS PST_0607 NC_009434.1 684312 685523 R Code: I; COG: COG0183; putative lipid-transfer protein complement(684312..685523) Pseudomonas stutzeri A1501 5094717 YP_001171156.1 CDS PST_0608 NC_009434.1 685602 686387 R Code: I; COG: COG1024; putative enoyl-CoA hydratase/isomerase complement(685602..686387) Pseudomonas stutzeri A1501 5094718 YP_001171157.1 CDS PST_0609 NC_009434.1 686721 688163 D Code: C; COG: COG1012; coniferyl aldehyde dehydrogenase 686721..688163 Pseudomonas stutzeri A1501 5094719 YP_001171158.1 CDS PST_0610 NC_009434.1 688230 688784 D dihydroxyacid dehydratase/phosphogluconate dehydratase 688230..688784 Pseudomonas stutzeri A1501 5094720 YP_001171159.1 CDS PST_0611 NC_009434.1 688837 689970 R Code: C; COG: COG1804; alpha-methylacyl-CoA racemase complement(688837..689970) Pseudomonas stutzeri A1501 5094721 YP_001171160.1 CDS PST_0612 NC_009434.1 690047 691660 R Code: E; COG: COG2303; putative alcohol dehydrogenase complement(690047..691660) Pseudomonas stutzeri A1501 5094722 YP_001171161.1 CDS PST_0613 NC_009434.1 692010 693050 D Code: K; COG: COG2207; AraC family transcriptional regulator 692010..693050 Pseudomonas stutzeri A1501 5094723 YP_001171162.1 CDS PST_0614 NC_009434.1 693148 695133 R Code: Q; COG: COG2015; metallo-beta-lactamase family protein complement(693148..695133) Pseudomonas stutzeri A1501 5094724 YP_001171163.1 CDS PST_0615 NC_009434.1 695582 697333 D hypothetical protein 695582..697333 Pseudomonas stutzeri A1501 5094725 YP_001171164.1 CDS PST_0616 NC_009434.1 697366 698730 D hypothetical protein 697366..698730 Pseudomonas stutzeri A1501 5094726 YP_001171165.1 CDS PST_0617 NC_009434.1 698801 699877 D Code: R; COG: COG4447; glycosyl hydrolase 698801..699877 Pseudomonas stutzeri A1501 5094727 YP_001171166.1 CDS PST_0618 NC_009434.1 699934 702414 D Code: R; COG: COG1033; transporter 699934..702414 Pseudomonas stutzeri A1501 5094728 YP_001171167.1 CDS PST_0619 NC_009434.1 702609 702989 R hypothetical protein complement(702609..702989) Pseudomonas stutzeri A1501 5094729 YP_001171168.1 CDS PST_0620 NC_009434.1 703882 704544 R hypothetical protein complement(703882..704544) Pseudomonas stutzeri A1501 5094730 YP_001171169.1 CDS PST_0621 NC_009434.1 704612 705094 R fatty acid synthase subunit beta complement(704612..705094) Pseudomonas stutzeri A1501 5094731 YP_001171170.1 CDS PST_0622 NC_009434.1 705114 705677 R hypothetical protein complement(705114..705677) Pseudomonas stutzeri A1501 5094732 YP_001171171.1 CDS PST_0623 NC_009434.1 705773 707563 R Code: I; COG: COG1022; AMP-dependent synthetase and ligase complement(705773..707563) Pseudomonas stutzeri A1501 5094733 YP_001171172.1 CDS PST_0624 NC_009434.1 707878 708147 D XRE family transcriptional regulator 707878..708147 Pseudomonas stutzeri A1501 5094734 YP_001171173.1 CDS PST_0625 NC_009434.1 708147 709343 D Code: R; COG: COG3550; hypothetical protein 708147..709343 Pseudomonas stutzeri A1501 5094735 YP_001171174.1 CDS PST_0626 NC_009434.1 709726 712191 R hypothetical protein complement(709726..712191) Pseudomonas stutzeri A1501 5094736 YP_001171175.1 CDS PST_0627 NC_009434.1 712193 712951 R hypothetical protein complement(712193..712951) Pseudomonas stutzeri A1501 5094737 YP_001171176.1 CDS PST_0628 NC_009434.1 713019 713789 R hypothetical protein complement(713019..713789) Pseudomonas stutzeri A1501 5094738 YP_001171177.1 CDS PST_0629 NC_009434.1 714070 715899 R hypothetical protein complement(714070..715899) Pseudomonas stutzeri A1501 5094739 YP_001171178.1 CDS PST_0630 NC_009434.1 715961 716581 R hypothetical protein complement(715961..716581) Pseudomonas stutzeri A1501 5094740 YP_001171179.1 CDS PST_0631 NC_009434.1 716578 717282 R hypothetical protein complement(716578..717282) Pseudomonas stutzeri A1501 5094741 YP_001171180.1 CDS PST_0632 NC_009434.1 717297 718715 R Code: V; COG: COG0732; type I restriction-modification system subunit S complement(717297..718715) Pseudomonas stutzeri A1501 5094742 YP_001171181.1 CDS PST_0633 NC_009434.1 718708 720255 R Code: V; COG: COG0286; type I restriction-modification system, M subunit complement(718708..720255) Pseudomonas stutzeri A1501 5094743 YP_001171182.1 CDS PST_0634 NC_009434.1 720338 721198 R abortive infection bacteriophage resistance protein complement(720338..721198) Pseudomonas stutzeri A1501 5094744 YP_001171183.1 CDS hsdR NC_009434.1 721578 725051 R restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities; type I restriction enzyme EcoKI subunit R complement(721578..725051) Pseudomonas stutzeri A1501 5094745 YP_001171184.1 CDS PST_0636 NC_009434.1 726688 727032 D Code: L; COG: COG3436; ISPsy5, Orf1 726688..727032 Pseudomonas stutzeri A1501 5094746 YP_001171185.1 CDS PST_0637 NC_009434.1 727154 728692 D Code: L; COG: COG3436; ISPpu14, transposase Orf3 727154..728692 Pseudomonas stutzeri A1501 5094747 YP_001171186.1 CDS PST_0638 NC_009434.1 729117 729764 D hypothetical protein 729117..729764 Pseudomonas stutzeri A1501 5094748 YP_001171187.1 CDS PST_0639 NC_009434.1 729764 732961 D Code: V; COG: COG0610; type I restriction-modification system endonuclease 729764..732961 Pseudomonas stutzeri A1501 5094621 YP_001171188.1 CDS PST_0640 NC_009434.1 734223 735764 D phage Hau3 resistance protein 734223..735764 Pseudomonas stutzeri A1501 5094622 YP_001171189.1 CDS PST_0641 NC_009434.1 735806 736624 D hypothetical protein 735806..736624 Pseudomonas stutzeri A1501 5094623 YP_001171190.1 CDS PST_0642 NC_009434.1 737080 738552 D transposase 737080..738552 Pseudomonas stutzeri A1501 5094624 YP_001171191.1 CDS PST_0643 NC_009434.1 738545 739348 D transposase 738545..739348 Pseudomonas stutzeri A1501 5094625 YP_001171192.1 CDS PST_0644 NC_009434.1 740178 741716 R Code: L; COG: COG3436; ISPpu14, transposase Orf3 complement(740178..741716) Pseudomonas stutzeri A1501 5094626 YP_001171193.1 CDS PST_0645 NC_009434.1 741838 742182 R Code: L; COG: COG3436; ISPsy5, Orf1 complement(741838..742182) Pseudomonas stutzeri A1501 5094627 YP_001171194.1 CDS PST_0646 NC_009434.1 742517 742990 R type I restriction-modification system, S subunit, truncation complement(742517..742990) Pseudomonas stutzeri A1501 5094628 YP_001171195.1 CDS PST_0647 NC_009434.1 743080 745056 R Code: V; COG: COG0286; type I restriction-modification system, M subunit complement(743080..745056) Pseudomonas stutzeri A1501 5094629 YP_001171196.1 CDS PST_0648 NC_009434.1 745740 747278 R Code: L; COG: COG3436; ISPpu14, transposase Orf3 complement(745740..747278) Pseudomonas stutzeri A1501 5094630 YP_001171197.1 CDS PST_0649 NC_009434.1 747400 747744 R Code: L; COG: COG3436; ISPsy5, Orf1 complement(747400..747744) Pseudomonas stutzeri A1501 5094631 YP_001171198.1 CDS PST_0650 NC_009434.1 748113 749129 R type III restriction enzyme, res subunit complement(748113..749129) Pseudomonas stutzeri A1501 5094632 YP_001171199.1 CDS PST_0651 NC_009434.1 749240 749842 R hypothetical protein complement(749240..749842) Pseudomonas stutzeri A1501 5094633 YP_001171200.1 CDS PST_0652 NC_009434.1 749946 750173 D Cro/CI family transcriptional regulator 749946..750173 Pseudomonas stutzeri A1501 5094634 YP_001171201.1 CDS PST_0653 NC_009434.1 750371 750682 D hypothetical protein 750371..750682 Pseudomonas stutzeri A1501 5094635 YP_001171202.1 CDS PST_0654 NC_009434.1 751323 752981 D Code: L; COG: COG4584; ISPsy14, transposase 751323..752981 Pseudomonas stutzeri A1501 5094636 YP_001171203.1 CDS PST_0655 NC_009434.1 752968 753618 D Code: L; COG: COG1484; ISPsy14, transposition helper protein 752968..753618 Pseudomonas stutzeri A1501 5094637 YP_001171204.1 CDS PST_0656 NC_009434.1 754035 754769 D hypothetical protein 754035..754769 Pseudomonas stutzeri A1501 5094638 YP_001171205.1 CDS PST_0657 NC_009434.1 755223 755747 D transposase-like protein TnpA3 755223..755747 Pseudomonas stutzeri A1501 5094639 YP_001171206.1 CDS PST_0658 NC_009434.1 756340 757845 D Code: L; COG: COG3344; putative reverse transcriptase-maturase-transposase 756340..757845 Pseudomonas stutzeri A1501 5094640 YP_001171207.1 CDS PST_0659 NC_009434.1 757957 758376 D transposase 757957..758376 Pseudomonas stutzeri A1501 5094641 YP_001171208.1 CDS PST_0660 NC_009434.1 758550 759380 D hypothetical protein 758550..759380 Pseudomonas stutzeri A1501 5094642 YP_001171209.1 CDS PST_0661 NC_009434.1 759311 761716 D hypothetical protein 759311..761716 Pseudomonas stutzeri A1501 5094643 YP_001171210.1 CDS PST_0662 NC_009434.1 762105 762710 D Code: O; COG: COG1651; outer membrane protein 762105..762710 Pseudomonas stutzeri A1501 5094644 YP_001171211.1 CDS cadR NC_009434.1 762792 763244 R Code: K; COG: COG0789; transcriptional regulator CadR complement(762792..763244) Pseudomonas stutzeri A1501 5094645 YP_001171212.1 CDS cadA-2 NC_009434.1 763480 765762 D Code: P; COG: COG2217; cadmium translocating P-type ATPase 763480..765762 Pseudomonas stutzeri A1501 5094646 YP_001171213.1 CDS PST_0665 NC_009434.1 765779 766141 D hypothetical protein 765779..766141 Pseudomonas stutzeri A1501 5094647 YP_001171214.1 CDS PST_0666 NC_009434.1 766138 766608 D hypothetical protein 766138..766608 Pseudomonas stutzeri A1501 5094648 YP_001171215.1 CDS PST_0667 NC_009434.1 766834 767394 D hypothetical protein 766834..767394 Pseudomonas stutzeri A1501 5094649 YP_001171216.1 CDS PST_0668 NC_009434.1 767824 769254 R Code: L; COG: COG3666; ISPsy6, transposase complement(767824..769254) Pseudomonas stutzeri A1501 5094650 YP_001171217.1 CDS PST_0669 NC_009434.1 769389 769901 R hypothetical protein complement(769389..769901) Pseudomonas stutzeri A1501 5094651 YP_001171218.1 CDS PST_0670 NC_009434.1 769936 770328 D hypothetical protein 769936..770328 Pseudomonas stutzeri A1501 5094652 YP_001171219.1 CDS PST_0671 NC_009434.1 771381 772805 D hypothetical protein 771381..772805 Pseudomonas stutzeri A1501 5094653 YP_001171220.1 CDS PST_0672 NC_009434.1 773049 773327 D Code: L; COG: COG2963; ISxac3 transposase 773049..773327 Pseudomonas stutzeri A1501 5094654 YP_001171221.1 CDS PST_0673 NC_009434.1 773724 774797 R Code: L; COG: COG4584; ISPsy14, transposase complement(773724..774797) Pseudomonas stutzeri A1501 5094655 YP_001171222.1 CDS arcC-1 NC_009434.1 775799 776671 R reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(775799..776671) Pseudomonas stutzeri A1501 5094656 YP_001171223.1 CDS arcB-1 NC_009434.1 777021 778031 R catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase complement(777021..778031) Pseudomonas stutzeri A1501 5094657 YP_001171224.1 CDS arcA-1 NC_009434.1 778095 779345 R catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase complement(778095..779345) Pseudomonas stutzeri A1501 5094658 YP_001171225.1 CDS arcD-1 NC_009434.1 779397 780824 R Code: E; COG: COG0531; arginine/ornithine antiporter complement(779397..780824) Pseudomonas stutzeri A1501 5094659 YP_001171226.1 CDS PST_0678 NC_009434.1 780966 781181 R putative lipoprotein complement(780966..781181) Pseudomonas stutzeri A1501 5094660 YP_001171227.1 CDS PST_0679 NC_009434.1 781178 782629 R Code: MU; COG: COG1538; outer membrane efflux protein TolC complement(781178..782629) Pseudomonas stutzeri A1501 5094661 YP_001171228.1 CDS PST_0680 NC_009434.1 782695 783810 R Code: V; COG: COG0842; ABC transporter permease complement(782695..783810) Pseudomonas stutzeri A1501 5094662 YP_001171229.1 CDS PST_0681 NC_009434.1 783812 786583 R ABC transporter ATP-binding protein/permease complement(783812..786583) Pseudomonas stutzeri A1501 5094663 YP_001171230.1 CDS PST_0682 NC_009434.1 786547 787770 R Code: M; COG: COG0845; membrane fusion protein complement(786547..787770) Pseudomonas stutzeri A1501 5094664 YP_001171231.1 CDS phaC NC_009434.1 787647 789347 R Code: I; COG: COG3243; poly(3-hydroxyalkanoate) polymerase complement(787647..789347) Pseudomonas stutzeri A1501 5094665 YP_001171232.1 CDS phaA NC_009434.1 789488 790666 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(789488..790666) Pseudomonas stutzeri A1501 5094666 YP_001171233.1 CDS phaB NC_009434.1 790703 791458 R Code: IQR; COG: COG1028; 3-oxoacyl-(acyl-carrier-protein) reductase complement(790703..791458) Pseudomonas stutzeri A1501 5094667 YP_001171234.1 CDS phbR NC_009434.1 791856 792878 D Code: K; COG: COG2207; AraC family transcriptional regulator 791856..792878 Pseudomonas stutzeri A1501 5094668 YP_001171235.1 CDS gltS NC_009434.1 792732 793898 R Code: E; COG: COG0786; sodium-glutamate symporter complement(792732..793898) Pseudomonas stutzeri A1501 5094669 YP_001171236.1 CDS PST_0688 NC_009434.1 793968 794747 R Code: I; COG: COG0623; enoyl-(acyl-carrier-protein) reductase complement(793968..794747) Pseudomonas stutzeri A1501 5094670 YP_001171237.1 CDS tdcD NC_009434.1 794744 795952 R Code: C; COG: COG0282; propionate kinase complement(794744..795952) Pseudomonas stutzeri A1501 5094671 YP_001171238.1 CDS PST_0690 NC_009434.1 795949 796881 R catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs; phosphate acetyltransferase complement(795949..796881) Pseudomonas stutzeri A1501 5094672 YP_001171239.1 CDS PST_0691 NC_009434.1 796878 799427 R poly(3-hydroxyalkanoate) synthetase complement(796878..799427) Pseudomonas stutzeri A1501 5094673 YP_001171240.1 CDS phaP NC_009434.1 799675 800241 D phasin PhaP 799675..800241 Pseudomonas stutzeri A1501 5094674 YP_001171241.1 CDS phaR NC_009434.1 800276 800956 R Code: S; COG: COG5394; polyhydroxyalkanoate synthesis repressor PhaR complement(800276..800956) Pseudomonas stutzeri A1501 5094675 YP_001171242.1 CDS PST_0694 NC_009434.1 801065 803023 D hypothetical protein 801065..803023 Pseudomonas stutzeri A1501 5094676 YP_001171243.1 CDS PST_0695 NC_009434.1 803020 804054 D hypothetical protein 803020..804054 Pseudomonas stutzeri A1501 5094677 YP_001171244.1 CDS PST_0696 NC_009434.1 804054 804218 D hypothetical protein 804054..804218 Pseudomonas stutzeri A1501 5094678 YP_001171245.1 CDS PST_0697 NC_009434.1 804966 805265 D Code: L; COG: COG2963; IS3 orfA 804966..805265 Pseudomonas stutzeri A1501 5094679 YP_001171246.1 CDS PST_0698 NC_009434.1 805277 805927 D Code: L; COG: COG2801; IS3 orfB 805277..805927 Pseudomonas stutzeri A1501 5094680 YP_001171247.1 CDS PST_0699 NC_009434.1 806588 807772 D hypothetical protein 806588..807772 Pseudomonas stutzeri A1501 5094681 YP_001171248.1 CDS PST_0700 NC_009434.1 807786 808823 D transposase or inactivated derivative 807786..808823 Pseudomonas stutzeri A1501 5094682 YP_001171249.1 CDS PST_0701 NC_009434.1 808825 808980 D hypothetical protein 808825..808980 Pseudomonas stutzeri A1501 5094554 YP_001171250.1 CDS PST_0702 NC_009434.1 809088 809336 D hypothetical protein 809088..809336 Pseudomonas stutzeri A1501 5094555 YP_001171251.1 CDS PST_0703 NC_009434.1 809307 810275 R hypothetical protein complement(809307..810275) Pseudomonas stutzeri A1501 5094556 YP_001171252.1 CDS PST_0704 NC_009434.1 810454 810591 D hypothetical protein 810454..810591 Pseudomonas stutzeri A1501 5094557 YP_001171253.1 CDS PST_0705 NC_009434.1 810982 811326 R hypothetical protein complement(810982..811326) Pseudomonas stutzeri A1501 5094558 YP_001171254.1 CDS PST_0706 NC_009434.1 811374 812063 R hypothetical protein complement(811374..812063) Pseudomonas stutzeri A1501 5094559 YP_001171255.1 CDS PST_0707 NC_009434.1 812098 812556 R hypothetical protein complement(812098..812556) Pseudomonas stutzeri A1501 5094560 YP_001171256.1 CDS PST_0708 NC_009434.1 812645 812917 D Code: K; COG: COG1396; putative regulatory protein 812645..812917 Pseudomonas stutzeri A1501 5094561 YP_001171257.1 CDS PST_0709 NC_009434.1 812940 813395 R hypothetical protein complement(812940..813395) Pseudomonas stutzeri A1501 5094562 YP_001171258.1 CDS PST_0710 NC_009434.1 813497 813631 R hypothetical protein complement(813497..813631) Pseudomonas stutzeri A1501 5094563 YP_001171259.1 CDS rpoD NC_009434.1 813846 815555 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(813846..815555) Pseudomonas stutzeri A1501 5094565 YP_001171260.1 CDS dnaG NC_009434.1 815767 817719 R synthesizes RNA primers at the replication forks; DNA primase complement(815767..817719) Pseudomonas stutzeri A1501 5094566 YP_001171261.1 CDS rpsU NC_009434.1 817853 818068 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(817853..818068) Pseudomonas stutzeri A1501 5094567 YP_001171262.1 CDS gcp NC_009434.1 818150 819289 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 818150..819289 Pseudomonas stutzeri A1501 5094568 YP_001171263.1 CDS PST_0716 NC_009434.1 819301 819879 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY complement(819301..819879) Pseudomonas stutzeri A1501 5094569 YP_001171264.1 CDS folB-1 NC_009434.1 819946 820299 D Code: H; COG: COG1539; dihydroneopterin aldolase 819946..820299 Pseudomonas stutzeri A1501 5094570 YP_001171265.1 CDS folK-1 NC_009434.1 820290 820832 D Code: H; COG: COG0801; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 820290..820832 Pseudomonas stutzeri A1501 5094571 YP_001171266.1 CDS cca NC_009434.1 820833 822230 R Code: J; COG: COG0617; tRNA nucleotidyl transferase complement(820833..822230) Pseudomonas stutzeri A1501 5094572 YP_001171267.1 CDS PST_0720 NC_009434.1 822104 823651 R Code: S; COG: COG2719; SpoVR family protein complement(822104..823651) Pseudomonas stutzeri A1501 5094573 YP_001171268.1 CDS PST_0721 NC_009434.1 823662 824933 R Code: S; COG: COG2718; hypothetical protein complement(823662..824933) Pseudomonas stutzeri A1501 5094574 YP_001171269.1 CDS prkA NC_009434.1 825016 826809 R Code: T; COG: COG2766; serine protein kinase PrkA complement(825016..826809) Pseudomonas stutzeri A1501 5094575 YP_001171270.1 CDS glpE NC_009434.1 827210 827539 R belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; thiosulfate sulfurtransferase complement(827210..827539) Pseudomonas stutzeri A1501 5094576 YP_001171271.1 CDS apaH NC_009434.1 827536 828363 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(827536..828363) Pseudomonas stutzeri A1501 5094577 YP_001171272.1 CDS apaG NC_009434.1 828360 828743 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(828360..828743) Pseudomonas stutzeri A1501 5094578 YP_001171273.1 CDS ksgA NC_009434.1 828777 829571 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(828777..829571) Pseudomonas stutzeri A1501 5094579 YP_001171274.1 CDS pdxA NC_009434.1 829705 830694 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(829705..830694) Pseudomonas stutzeri A1501 5094580 YP_001171275.1 CDS surA NC_009434.1 830804 832159 R Code: O; COG: COG0760; peptidyl-prolyl cis-trans isomerase SurA complement(830804..832159) Pseudomonas stutzeri A1501 5094581 YP_001171276.1 CDS ostA NC_009434.1 832092 834914 R Code: M; COG: COG1452; organic solvent tolerance protein OstA complement(832092..834914) Pseudomonas stutzeri A1501 5094582 YP_001171277.1 CDS PST_0730 NC_009434.1 835011 836030 D Code: R; COG: COG3178; aminoglycoside phosphotransferase 835011..836030 Pseudomonas stutzeri A1501 5094583 YP_001171278.1 CDS PST_0731 NC_009434.1 836027 836698 D Code: MJ; COG: COG1208; nucleotidyltransferase family protein 836027..836698 Pseudomonas stutzeri A1501 5094584 YP_001171279.1 CDS djlA NC_009434.1 836700 837467 D Code: O; COG: COG1076; DnaJ-like protein DjlA 836700..837467 Pseudomonas stutzeri A1501 5094585 YP_001171280.1 CDS PST_0733 NC_009434.1 837473 838483 R hydrolase or acyltransferase complement(837473..838483) Pseudomonas stutzeri A1501 5094586 YP_001171281.1 CDS PST_0734 NC_009434.1 838711 840996 D two-component sensor 838711..840996 Pseudomonas stutzeri A1501 5094587 YP_001171282.1 CDS uhpA NC_009434.1 840993 841622 D Code: TK; COG: COG2197; DNA-binding response regulator UhpA 840993..841622 Pseudomonas stutzeri A1501 5094588 YP_001171283.1 CDS PST_0736 NC_009434.1 841771 842880 D Code: E; COG: COG3842; ABC transporter ATP-binding protein 841771..842880 Pseudomonas stutzeri A1501 5094589 YP_001171284.1 CDS PST_0737 NC_009434.1 842928 843959 D Code: E; COG: COG0687; polyamine ABC transporter periplasmic polyamine-binding protein 842928..843959 Pseudomonas stutzeri A1501 5094590 YP_001171285.1 CDS PST_0738 NC_009434.1 844023 845276 D Code: E; COG: COG1176; ABC transporter permease 844023..845276 Pseudomonas stutzeri A1501 5094591 YP_001171286.1 CDS PST_0739 NC_009434.1 845340 846167 D Code: E; COG: COG1177; ABC transporter permease 845340..846167 Pseudomonas stutzeri A1501 5094592 YP_001171287.1 CDS gabD-1 NC_009434.1 846180 847646 D Code: C; COG: COG1012; succinate-semialdehyde dehydrogenase 846180..847646 Pseudomonas stutzeri A1501 5094593 YP_001171288.1 CDS gabT NC_009434.1 847828 849084 D Code: E; COG: COG0160; 4-aminobutyrate aminotransferase 847828..849084 Pseudomonas stutzeri A1501 5094594 YP_001171289.1 CDS rpe NC_009434.1 849251 849862 D Code: G; COG: COG0036; ribulose-phosphate 3-epimerase 849251..849862 Pseudomonas stutzeri A1501 5094595 YP_001171290.1 CDS gph NC_009434.1 849859 850560 D Code: R; COG: COG0546; phosphoglycolate phosphatase 849859..850560 Pseudomonas stutzeri A1501 5094596 YP_001171291.1 CDS trpE NC_009434.1 850621 852225 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 850621..852225 Pseudomonas stutzeri A1501 5094597 YP_001171292.1 CDS trpG NC_009434.1 852228 852821 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 852228..852821 Pseudomonas stutzeri A1501 5094598 YP_001171293.1 CDS trpD NC_009434.1 852821 853867 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 852821..853867 Pseudomonas stutzeri A1501 5094599 YP_001171294.1 CDS trpC NC_009434.1 853864 854700 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 853864..854700 Pseudomonas stutzeri A1501 5094600 YP_001171295.1 CDS PST_0748 NC_009434.1 854713 855381 D hypothetical protein 854713..855381 Pseudomonas stutzeri A1501 5094601 YP_001171296.1 CDS PST_0749 NC_009434.1 855429 856031 D Code: O; COG: COG1765; OsmC/Ohr family protein 855429..856031 Pseudomonas stutzeri A1501 5094602 YP_001171297.1 CDS PST_0750 NC_009434.1 856441 857088 R Code: H; COG: COG2941; putative ubiquinone biosynthesis protein complement(856441..857088) Pseudomonas stutzeri A1501 5094603 YP_001171298.1 CDS PST_0751 NC_009434.1 857200 859050 D Code: O; COG: COG0464; ATPase 857200..859050 Pseudomonas stutzeri A1501 5094604 YP_001171299.1 CDS PST_0752 NC_009434.1 859060 859971 R membrane protein complement(859060..859971) Pseudomonas stutzeri A1501 5094605 YP_001171300.1 CDS PST_0754 NC_009434.1 860145 860633 R Code: S; COG: COG1981; membrane protein complement(860145..860633) Pseudomonas stutzeri A1501 5094606 YP_001171301.2 CDS argC NC_009434.1 860704 861738 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 860704..861738 Pseudomonas stutzeri A1501 5094607 YP_001171302.1 CDS PST_0755 NC_009434.1 861852 862202 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 861852..862202 Pseudomonas stutzeri A1501 5094608 YP_001171303.1 CDS anmK NC_009434.1 862261 863331 R distantly related to HSP70-fold metalloprotease; catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(862261..863331) Pseudomonas stutzeri A1501 5094609 YP_001171304.1 CDS PST_0757 NC_009434.1 863355 864761 R Code: M; COG: COG0739; M24/M37 family peptidase complement(863355..864761) Pseudomonas stutzeri A1501 5094610 YP_001171305.1 CDS tyrS NC_009434.1 864940 866139 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 864940..866139 Pseudomonas stutzeri A1501 5094611 YP_001171306.1 CDS birA NC_009434.1 872008 872955 D catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 872008..872955 Pseudomonas stutzeri A1501 5094616 YP_001171307.1 CDS PST_0764 NC_009434.1 872952 873692 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 872952..873692 Pseudomonas stutzeri A1501 5094617 YP_001171308.1 CDS PST_0765 NC_009434.1 873717 874388 D hypothetical protein 873717..874388 Pseudomonas stutzeri A1501 5094618 YP_001171309.1 CDS tuf NC_009434.1 874900 876093 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 874900..876093 Pseudomonas stutzeri A1501 5098439 YP_001171310.1 CDS secE NC_009434.1 876263 876631 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 876263..876631 Pseudomonas stutzeri A1501 5098441 YP_001171311.1 CDS nusG NC_009434.1 876641 877174 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 876641..877174 Pseudomonas stutzeri A1501 5098442 YP_001171312.1 CDS rplK NC_009434.1 877285 877716 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 877285..877716 Pseudomonas stutzeri A1501 5098443 YP_001171313.1 CDS rplA NC_009434.1 877716 878411 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 877716..878411 Pseudomonas stutzeri A1501 5098444 YP_001171314.1 CDS rplJ NC_009434.1 878621 879121 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 878621..879121 Pseudomonas stutzeri A1501 5098445 YP_001171315.1 CDS rplL NC_009434.1 879202 879570 D Code: J; COG: COG0222; 50S ribosomal protein L7/L12 879202..879570 Pseudomonas stutzeri A1501 5098446 YP_001171316.1 CDS rpoB NC_009434.1 879783 883853 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 879783..883853 Pseudomonas stutzeri A1501 5098447 YP_001171317.1 CDS rpoC NC_009434.1 883919 888118 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 883919..888118 Pseudomonas stutzeri A1501 5098448 YP_001171318.1 CDS rpsL NC_009434.1 888260 888631 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 888260..888631 Pseudomonas stutzeri A1501 5098449 YP_001171319.1 CDS rpsG NC_009434.1 888729 889199 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 888729..889199 Pseudomonas stutzeri A1501 5098450 YP_001171320.1 CDS fusA1 NC_009434.1 889230 891350 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 889230..891350 Pseudomonas stutzeri A1501 5098451 YP_001171321.1 CDS tuf-1 NC_009434.1 891381 892574 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 891381..892574 Pseudomonas stutzeri A1501 5098452 YP_001171322.1 CDS rpsJ NC_009434.1 892725 893036 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 892725..893036 Pseudomonas stutzeri A1501 5098453 YP_001171323.1 CDS rplC NC_009434.1 893119 893754 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 893119..893754 Pseudomonas stutzeri A1501 5098454 YP_001171324.1 CDS rplD NC_009434.1 893767 894369 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 893767..894369 Pseudomonas stutzeri A1501 5098455 YP_001171325.1 CDS rplW NC_009434.1 894366 894665 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 894366..894665 Pseudomonas stutzeri A1501 5098456 YP_001171326.1 CDS rplB NC_009434.1 894680 895501 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 894680..895501 Pseudomonas stutzeri A1501 5098457 YP_001171327.1 CDS rpsS NC_009434.1 895518 895793 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 895518..895793 Pseudomonas stutzeri A1501 5098458 YP_001171328.1 CDS rplV NC_009434.1 895807 896139 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 895807..896139 Pseudomonas stutzeri A1501 5098459 YP_001171329.1 CDS rpsC NC_009434.1 896153 896839 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 896153..896839 Pseudomonas stutzeri A1501 5098460 YP_001171330.1 CDS rplP NC_009434.1 896852 897265 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 896852..897265 Pseudomonas stutzeri A1501 5098461 YP_001171331.1 CDS rpmC NC_009434.1 897265 897456 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 897265..897456 Pseudomonas stutzeri A1501 5098462 YP_001171332.1 CDS rpsQ NC_009434.1 897459 897725 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 897459..897725 Pseudomonas stutzeri A1501 5098463 YP_001171333.1 CDS rplN NC_009434.1 897749 898117 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 897749..898117 Pseudomonas stutzeri A1501 5098464 YP_001171334.1 CDS rplX NC_009434.1 898129 898443 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 898129..898443 Pseudomonas stutzeri A1501 5098465 YP_001171335.1 CDS rplE NC_009434.1 898463 899002 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 898463..899002 Pseudomonas stutzeri A1501 5098466 YP_001171336.1 CDS rpsN NC_009434.1 899016 899321 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 899016..899321 Pseudomonas stutzeri A1501 5098467 YP_001171337.1 CDS rpsH NC_009434.1 899502 899894 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 899502..899894 Pseudomonas stutzeri A1501 5098468 YP_001171338.1 CDS rplF NC_009434.1 899907 900440 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 899907..900440 Pseudomonas stutzeri A1501 5098469 YP_001171339.1 CDS rplR NC_009434.1 900505 900801 D Code: J; COG: COG0256; 50S ribosomal protein L18 900505..900801 Pseudomonas stutzeri A1501 5098470 YP_001171340.1 CDS rpsE NC_009434.1 900805 901305 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 900805..901305 Pseudomonas stutzeri A1501 5098471 YP_001171341.1 CDS rpmD NC_009434.1 901308 901487 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 901308..901487 Pseudomonas stutzeri A1501 5098472 YP_001171342.1 CDS rplO NC_009434.1 901491 901925 D late assembly protein; 50S ribosomal protein L15 901491..901925 Pseudomonas stutzeri A1501 5098473 YP_001171343.1 CDS secY NC_009434.1 901926 903254 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 901926..903254 Pseudomonas stutzeri A1501 5098474 YP_001171344.1 CDS rpmJ NC_009434.1 903284 903400 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 903284..903400 Pseudomonas stutzeri A1501 5098475 YP_001171345.1 CDS rpsM NC_009434.1 903530 903886 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 903530..903886 Pseudomonas stutzeri A1501 5098476 YP_001171346.1 CDS rpsK NC_009434.1 903917 904306 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 903917..904306 Pseudomonas stutzeri A1501 5098477 YP_001171347.1 CDS rpsD NC_009434.1 904324 904944 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 904324..904944 Pseudomonas stutzeri A1501 5098478 YP_001171348.1 CDS rpoA NC_009434.1 904967 905968 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 904967..905968 Pseudomonas stutzeri A1501 5098479 YP_001171349.1 CDS rplQ NC_009434.1 906014 906403 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 906014..906403 Pseudomonas stutzeri A1501 5098480 YP_001171350.1 CDS katA NC_009434.1 906566 908023 D Code: P; COG: COG0753; catalase 906566..908023 Pseudomonas stutzeri A1501 5098481 YP_001171351.1 CDS uvrA NC_009434.1 908090 911047 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(908090..911047) Pseudomonas stutzeri A1501 5098482 YP_001171352.1 CDS PST_0813 NC_009434.1 911060 912427 D Code: GEPR; COG: COG0477; major facilitator family transporter 911060..912427 Pseudomonas stutzeri A1501 5098483 YP_001171353.1 CDS ssb NC_009434.1 912604 913083 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 912604..913083 Pseudomonas stutzeri A1501 5098484 YP_001171354.1 CDS PST_0815 NC_009434.1 913340 913978 D Code: M; COG: COG1091; dTDP-4-rhamnose reductase-like protein 913340..913978 Pseudomonas stutzeri A1501 5098485 YP_001171355.1 CDS PST_0816 NC_009434.1 913971 914900 D Code: MG; COG: COG0451; epimerase 913971..914900 Pseudomonas stutzeri A1501 5098486 YP_001171356.1 CDS oprG NC_009434.1 914970 915647 R Code: M; COG: COG3047; outer membrane protein OprG complement(914970..915647) Pseudomonas stutzeri A1501 5098487 YP_001171357.1 CDS PST_0818 NC_009434.1 915832 916617 D chromosome segregation ATPase 915832..916617 Pseudomonas stutzeri A1501 5098488 YP_001171358.1 CDS PST_0819 NC_009434.1 916614 917960 D TonB system biopolymer transport component 916614..917960 Pseudomonas stutzeri A1501 5098489 YP_001171359.1 CDS exbB2 NC_009434.1 917953 918498 D Code: U; COG: COG0811; TonB system transport protein ExbB 917953..918498 Pseudomonas stutzeri A1501 5098490 YP_001171360.1 CDS exbD2 NC_009434.1 918516 918923 D Code: U; COG: COG0848; TonB system transport protein ExbD 918516..918923 Pseudomonas stutzeri A1501 5098491 YP_001171361.1 CDS PST_0822 NC_009434.1 918923 919636 D TonB family protein 918923..919636 Pseudomonas stutzeri A1501 5098492 YP_001171362.1 CDS PST_0823 NC_009434.1 919638 920729 D hypothetical protein 919638..920729 Pseudomonas stutzeri A1501 5098493 YP_001171363.1 CDS PST_0824 NC_009434.1 920781 921305 R Code: S; COG: COG3495; putative lipoprotein complement(920781..921305) Pseudomonas stutzeri A1501 5098494 YP_001171364.1 CDS PST_0825 NC_009434.1 921302 922567 R Code: V; COG: COG0577; ABC efflux transporter permease complement(921302..922567) Pseudomonas stutzeri A1501 5098495 YP_001171365.1 CDS PST_0826 NC_009434.1 922571 923278 R Code: V; COG: COG1136; ABC transporter ATP-binding protein complement(922571..923278) Pseudomonas stutzeri A1501 5098496 YP_001171366.1 CDS PST_0827 NC_009434.1 923296 923910 R hypothetical protein complement(923296..923910) Pseudomonas stutzeri A1501 5098497 YP_001171367.1 CDS PST_0828 NC_009434.1 924017 924403 D hypothetical protein 924017..924403 Pseudomonas stutzeri A1501 5098498 YP_001171368.1 CDS trx-1 NC_009434.1 924397 925266 R Code: O; COG: COG3118; thioredoxin complement(924397..925266) Pseudomonas stutzeri A1501 5098499 YP_001171369.1 CDS PST_0830 NC_009434.1 925473 926699 D Code: R; COG: COG2391; putative inner membrane protein 925473..926699 Pseudomonas stutzeri A1501 5098500 YP_001171370.1 CDS PST_0831 NC_009434.1 926758 926907 D hypothetical protein 926758..926907 Pseudomonas stutzeri A1501 5098501 YP_001171371.1 CDS ligT NC_009434.1 926927 927448 R Code: J; COG: COG1514; 2'-5' RNA ligase complement(926927..927448) Pseudomonas stutzeri A1501 5098502 YP_001171372.1 CDS PST_0833 NC_009434.1 927464 928693 R hypothetical protein complement(927464..928693) Pseudomonas stutzeri A1501 5098503 YP_001171373.1 CDS PST_0834 NC_009434.1 928725 929120 D Code: K; COG: COG1327; transcriptional regulator 928725..929120 Pseudomonas stutzeri A1501 5098504 YP_001171374.1 CDS ribD NC_009434.1 929138 930217 D Code: H; COG: COG1985; riboflavin biosynthesis protein RibD 929138..930217 Pseudomonas stutzeri A1501 5098505 YP_001171375.1 CDS ribE-1 NC_009434.1 930755 931417 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 930755..931417 Pseudomonas stutzeri A1501 5098506 YP_001171376.1 CDS ribBA-1 NC_009434.1 931429 932508 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 931429..932508 Pseudomonas stutzeri A1501 5098507 YP_001171377.1 CDS ribH NC_009434.1 932569 933045 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 932569..933045 Pseudomonas stutzeri A1501 5098508 YP_001171378.1 CDS nusB NC_009434.1 933042 933527 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 933042..933527 Pseudomonas stutzeri A1501 5098509 YP_001171379.1 CDS thiL NC_009434.1 933540 934502 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 933540..934502 Pseudomonas stutzeri A1501 5098510 YP_001171380.1 CDS PST_0841 NC_009434.1 934554 935051 D Code: I; COG: COG1267; phosphatidylglycerophosphatase A 934554..935051 Pseudomonas stutzeri A1501 5098511 YP_001171381.1 CDS PST_0842 NC_009434.1 935141 935788 D Code: R; COG: COG3577; aspartyl protease 935141..935788 Pseudomonas stutzeri A1501 5098512 YP_001171382.1 CDS ribA NC_009434.1 935801 936529 D catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 935801..936529 Pseudomonas stutzeri A1501 5098513 YP_001171383.1 CDS PST_0844 NC_009434.1 936526 936933 D hypothetical protein 936526..936933 Pseudomonas stutzeri A1501 5098514 YP_001171384.1 CDS PST_0845 NC_009434.1 936933 937733 D Code: P; COG: COG0614; Fe3+-hydroxamate ABC transporter periplasmic protein 936933..937733 Pseudomonas stutzeri A1501 5098515 YP_001171385.1 CDS PST_0846 NC_009434.1 937757 939622 R Code: H; COG: COG4206; B12 family TonB-dependent receptor complement(937757..939622) Pseudomonas stutzeri A1501 5098516 YP_001171386.1 CDS sbcC NC_009434.1 940043 943696 R Code: L; COG: COG0419; exonuclease SbcC complement(940043..943696) Pseudomonas stutzeri A1501 5098517 YP_001171387.1 CDS sbcD NC_009434.1 943693 945099 R Code: L; COG: COG0420; exonuclease SbcD complement(943693..945099) Pseudomonas stutzeri A1501 5098518 YP_001171388.1 CDS PST_0849 NC_009434.1 945809 946681 R Code: K; COG: COG2378; transcriptional regulator complement(945809..946681) Pseudomonas stutzeri A1501 5098519 YP_001171389.1 CDS PST_0850 NC_009434.1 947217 948533 R Code: T; COG: COG0642; two-component sensor complement(947217..948533) Pseudomonas stutzeri A1501 5098520 YP_001171390.1 CDS PST_0851 NC_009434.1 948530 949195 R Code: TK; COG: COG0745; two-component response regulator complement(948530..949195) Pseudomonas stutzeri A1501 5098521 YP_001171391.1 CDS PST_0852 NC_009434.1 949195 949500 R Code: S; COG: COG3212; hypothetical protein complement(949195..949500) Pseudomonas stutzeri A1501 5098522 YP_001171392.1 CDS PST_0854 NC_009434.1 949510 950034 R hypothetical protein complement(949510..950034) Pseudomonas stutzeri A1501 5098523 YP_001171393.1 CDS PST_0853 NC_009434.1 949966 950340 D hypothetical protein 949966..950340 Pseudomonas stutzeri A1501 5098524 YP_001171394.1 CDS PST_0855 NC_009434.1 950342 951121 R Code: S; COG: COG4312; hypothetical protein complement(950342..951121) Pseudomonas stutzeri A1501 5098525 YP_001171395.1 CDS PST_0856 NC_009434.1 951262 951597 D Code: S; COG: COG5591; hypothetical protein 951262..951597 Pseudomonas stutzeri A1501 5098526 YP_001171396.1 CDS PST_0857 NC_009434.1 951748 952632 D Code: J; COG: COG0564; pseudouridylate synthase, 23S RNA-specific 951748..952632 Pseudomonas stutzeri A1501 5098527 YP_001171397.1 CDS PST_0858 NC_009434.1 952586 953479 D endonuclease 952586..953479 Pseudomonas stutzeri A1501 5098528 YP_001171398.1 CDS PST_0859 NC_009434.1 953529 954425 R Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase complement(953529..954425) Pseudomonas stutzeri A1501 5098529 YP_001171399.1 CDS PST_0860 NC_009434.1 954425 956065 R catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase complement(954425..956065) Pseudomonas stutzeri A1501 5098530 YP_001171400.1 CDS PST_0861 NC_009434.1 956121 956891 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(956121..956891) Pseudomonas stutzeri A1501 5098531 YP_001171401.1 CDS PST_0862 NC_009434.1 957002 958393 R Code: GE; COG: COG2610; hypothetical protein complement(957002..958393) Pseudomonas stutzeri A1501 5098532 YP_001171402.1 CDS PST_0863 NC_009434.1 958664 960004 R Code: I; COG: COG2031; short-chain fatty acid transporter family protein complement(958664..960004) Pseudomonas stutzeri A1501 5098533 YP_001171403.1 CDS PST_0864 NC_009434.1 960115 960531 D Code: S; COG: COG1430; exported protein 960115..960531 Pseudomonas stutzeri A1501 5098534 YP_001171404.1 CDS PST_0865 NC_009434.1 960768 961280 R Code: K; COG: COG1522; AsnC family transcriptional regulator complement(960768..961280) Pseudomonas stutzeri A1501 5098535 YP_001171405.1 CDS PST_0866 NC_009434.1 961480 964950 D Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 961480..964950 Pseudomonas stutzeri A1501 5098536 YP_001171406.1 CDS ldh NC_009434.1 965204 966166 D Code: E; COG: COG0334; leucine dehydrogenase 965204..966166 Pseudomonas stutzeri A1501 5098537 YP_001171407.1 CDS PST_0868 NC_009434.1 966295 967704 D Code: R; COG: COG0733; sodium-dependent transporter 966295..967704 Pseudomonas stutzeri A1501 5098538 YP_001171408.1 CDS hpd NC_009434.1 968115 969200 D Code: ER; COG: COG3185; 4-hydroxyphenylpyruvate dioxygenase 968115..969200 Pseudomonas stutzeri A1501 5098539 YP_001171409.1 CDS PST_0870 NC_009434.1 969391 970530 D Code: Q; COG: COG3508; homogentisate 1,2-dioxygenase 969391..970530 Pseudomonas stutzeri A1501 5098540 YP_001171410.1 CDS PST_0871 NC_009434.1 970530 971513 D Code: Q; COG: COG0179; 2-keto-4-pentenoate hydratase 970530..971513 Pseudomonas stutzeri A1501 5098541 YP_001171411.1 CDS PST_0872 NC_009434.1 971503 972162 D Code: O; COG: COG0625; glutathione S-transferase 971503..972162 Pseudomonas stutzeri A1501 5098542 YP_001171412.1 CDS PST_0873 NC_009434.1 972244 973704 D Code: R; COG: COG0733; sodium-dependent transporter 972244..973704 Pseudomonas stutzeri A1501 5098543 YP_001171413.1 CDS pctA NC_009434.1 973892 975769 D Code: NT; COG: COG0840; chemotactic transducer PctA 973892..975769 Pseudomonas stutzeri A1501 5098544 YP_001171414.1 CDS PST_0875 NC_009434.1 975893 976576 D Code: R; COG: COG0693; ThiJ/PfpI family protein 975893..976576 Pseudomonas stutzeri A1501 5098545 YP_001171415.1 CDS PST_0876 NC_009434.1 976580 977446 R Code: T; COG: COG2200; EAL domain-containing protein complement(976580..977446) Pseudomonas stutzeri A1501 5098546 YP_001171416.1 CDS PST_0877 NC_009434.1 977443 979116 R Code: P; COG: COG0475; sodium/proton antiporter complement(977443..979116) Pseudomonas stutzeri A1501 5098547 YP_001171417.1 CDS PST_0878 NC_009434.1 979505 980623 D Code: LKJ; COG: COG0513; ATP-dependent RNA helicase 979505..980623 Pseudomonas stutzeri A1501 5098548 YP_001171418.1 CDS PST_0879 NC_009434.1 980669 981256 R Code: E; COG: COG1280; hypothetical protein complement(980669..981256) Pseudomonas stutzeri A1501 5098549 YP_001171419.1 CDS PST_0880 NC_009434.1 981358 982197 R Code: K; COG: COG2207; AraC family transcriptional regulator complement(981358..982197) Pseudomonas stutzeri A1501 5098550 YP_001171420.1 CDS PST_0881 NC_009434.1 983443 984726 R Code: R; COG: COG2081; flavoprotein complement(983443..984726) Pseudomonas stutzeri A1501 5098551 YP_001171421.1 CDS PST_0882 NC_009434.1 984746 985666 R Code: BQ; COG: COG0123; histone deacetylase family protein complement(984746..985666) Pseudomonas stutzeri A1501 5098552 YP_001171422.1 CDS PST_0883 NC_009434.1 985737 986291 D Code: J; COG: COG1670; acetyltransferase 985737..986291 Pseudomonas stutzeri A1501 5098553 YP_001171423.1 CDS tesB NC_009434.1 986329 987237 D Code: I; COG: COG1946; acyl-CoA thioesterase II 986329..987237 Pseudomonas stutzeri A1501 5098554 YP_001171424.1 CDS PST_0885 NC_009434.1 987270 987824 D Code: R; COG: COG0546; HAD superfamily hydrolase 987270..987824 Pseudomonas stutzeri A1501 5098555 YP_001171425.1 CDS PST_0886 NC_009434.1 987927 988784 R Code: R; COG: COG2321; zinc metallopeptidase complement(987927..988784) Pseudomonas stutzeri A1501 5098556 YP_001171426.1 CDS PST_0887 NC_009434.1 988903 989514 R Code: R; COG: COG3019; metal-binding protein complement(988903..989514) Pseudomonas stutzeri A1501 5098557 YP_001171427.1 CDS PST_0888 NC_009434.1 989529 990068 D hypothetical protein 989529..990068 Pseudomonas stutzeri A1501 5098558 YP_001171428.1 CDS dnrE NC_009434.1 990072 990761 R Code: T; COG: COG0664; DnrE protein complement(990072..990761) Pseudomonas stutzeri A1501 5098559 YP_001171429.1 CDS PST_0890 NC_009434.1 990864 991649 R F0F1-type ATP synthase subunit beta complement(990864..991649) Pseudomonas stutzeri A1501 5098560 YP_001171430.1 CDS narL NC_009434.1 991816 992424 R Code: TK; COG: COG2197; two-component response regulator NarL complement(991816..992424) Pseudomonas stutzeri A1501 5098561 YP_001171431.1 CDS narX NC_009434.1 992402 994378 R Code: T; COG: COG3850; two-component sensor NarX complement(992402..994378) Pseudomonas stutzeri A1501 5098562 YP_001171432.1 CDS narK NC_009434.1 994646 996247 D Code: P; COG: COG2223; nitrite extrusion protein 994646..996247 Pseudomonas stutzeri A1501 5098563 YP_001171433.1 CDS PST_0894 NC_009434.1 996263 996721 D hypothetical protein 996263..996721 Pseudomonas stutzeri A1501 5098564 YP_001171434.1 CDS narM NC_009434.1 996736 998223 D Code: P; COG: COG2223; nitrate transporter 996736..998223 Pseudomonas stutzeri A1501 5098565 YP_001171435.1 CDS narG NC_009434.1 998329 1002087 D Code: C; COG: COG5013; respiratory nitrate reductase alpha chain 998329..1002087 Pseudomonas stutzeri A1501 5098566 YP_001171436.1 CDS narH NC_009434.1 1002099 1003637 D Code: C; COG: COG1140; respiratory nitrate reductase beta chain 1002099..1003637 Pseudomonas stutzeri A1501 5098567 YP_001171437.1 CDS narJ NC_009434.1 1003641 1004396 D Code: C; COG: COG2180; respiratory nitrate reductase delta chain 1003641..1004396 Pseudomonas stutzeri A1501 5098568 YP_001171438.1 CDS narI NC_009434.1 1004389 1005180 D Code: C; COG: COG2181; respiratory nitrate reductase gamma chain 1004389..1005180 Pseudomonas stutzeri A1501 5098569 YP_001171439.1 CDS PST_0900 NC_009434.1 1005184 1006218 D Code: O; COG: COG0760; peptidyl-prolyl cis-trans isomerase, PpiC-type 1005184..1006218 Pseudomonas stutzeri A1501 5098570 YP_001171440.1 CDS moaA NC_009434.1 1006328 1007317 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1006328..1007317 Pseudomonas stutzeri A1501 5098571 YP_001171441.1 CDS moaB2 NC_009434.1 1007558 1008103 D Code: H; COG: COG0521; molybdopterin biosynthetic protein B2 1007558..1008103 Pseudomonas stutzeri A1501 5098572 YP_001171442.1 CDS moeA1 NC_009434.1 1008100 1009332 D Code: H; COG: COG0303; molybdenum cofactor biosynthetic protein A1 1008100..1009332 Pseudomonas stutzeri A1501 5098573 YP_001171443.1 CDS PST_0904 NC_009434.1 1009387 1009938 R Code: C; COG: COG3038; cytochrome b561 complement(1009387..1009938) Pseudomonas stutzeri A1501 5098574 YP_001171444.1 CDS PST_0905 NC_009434.1 1009997 1011469 R Code: T; COG: COG0642; sensor histidine kinase complement(1009997..1011469) Pseudomonas stutzeri A1501 5098575 YP_001171445.1 CDS PST_0906 NC_009434.1 1011463 1012167 R Code: TK; COG: COG0745; DNA-binding response regulator complement(1011463..1012167) Pseudomonas stutzeri A1501 5098576 YP_001171446.1 CDS PST_0907 NC_009434.1 1012183 1012833 R hypothetical protein complement(1012183..1012833) Pseudomonas stutzeri A1501 5098577 YP_001171447.1 CDS PST_0908 NC_009434.1 1012830 1013660 R Code: IQR; COG: COG1028; short chain dehydrogenase complement(1012830..1013660) Pseudomonas stutzeri A1501 5098578 YP_001171448.1 CDS PST_0909 NC_009434.1 1013647 1014318 R carbamoylphosphate synthase large subunit (split gene in MJ) complement(1013647..1014318) Pseudomonas stutzeri A1501 5098579 YP_001171449.1 CDS PST_0910 NC_009434.1 1014334 1015797 R Code: I; COG: COG1022; long-chain acyl-CoA synthetase complement(1014334..1015797) Pseudomonas stutzeri A1501 5098580 YP_001171450.1 CDS PST_0911 NC_009434.1 1015763 1016452 R hypothetical protein complement(1015763..1016452) Pseudomonas stutzeri A1501 5098581 YP_001171451.1 CDS PST_0912 NC_009434.1 1016489 1017727 D Code: S; COG: COG3204; hypothetical protein 1016489..1017727 Pseudomonas stutzeri A1501 5098582 YP_001171452.1 CDS colR NC_009434.1 1017812 1018495 D Code: TK; COG: COG0745; DNA-binding response regulator ColR 1017812..1018495 Pseudomonas stutzeri A1501 5098583 YP_001171453.1 CDS colS NC_009434.1 1018485 1019753 D Code: T; COG: COG0642; sensor histidine kinase ColS 1018485..1019753 Pseudomonas stutzeri A1501 5098584 YP_001171454.1 CDS PST_0915 NC_009434.1 1019835 1020512 D Code: QR; COG: COG0500; SAM-dependent methyltransferase 1019835..1020512 Pseudomonas stutzeri A1501 5098585 YP_001171455.1 CDS PST_0916 NC_009434.1 1020515 1021234 D lipopolysaccharide kinase 1020515..1021234 Pseudomonas stutzeri A1501 5098586 YP_001171456.1 CDS PST_0917 NC_009434.1 1021224 1021631 D Code: M; COG: COG0818; diacylglycerol kinase 1021224..1021631 Pseudomonas stutzeri A1501 5098587 YP_001171457.1 CDS PST_0918 NC_009434.1 1021660 1023813 D Code: M; COG: COG1368; hypothetical protein 1021660..1023813 Pseudomonas stutzeri A1501 5098588 YP_001171458.1 CDS trmA NC_009434.1 1023913 1025001 R catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase complement(1023913..1025001) Pseudomonas stutzeri A1501 5098589 YP_001171459.1 CDS PST_0920 NC_009434.1 1025093 1026388 R Code: R; COG: COG2252; transporter complement(1025093..1026388) Pseudomonas stutzeri A1501 5098590 YP_001171460.1 CDS PST_0921 NC_009434.1 1026519 1027082 D Code: R; COG: COG0693; putative intracellular protease/amidase 1026519..1027082 Pseudomonas stutzeri A1501 5098591 YP_001171461.1 CDS PST_0922 NC_009434.1 1027151 1028125 D Code: O; COG: COG1975; xanthine and Co dehydrogenase maturation factor 1027151..1028125 Pseudomonas stutzeri A1501 5098592 YP_001171462.1 CDS PST_0923 NC_009434.1 1028079 1028723 D Code: R; COG: COG2068; MobA-like protein 1028079..1028723 Pseudomonas stutzeri A1501 5098593 YP_001171463.1 CDS PST_0924 NC_009434.1 1028848 1029360 D Code: C; COG: COG2080; iron-sulfur cluster-binding protein 1028848..1029360 Pseudomonas stutzeri A1501 5098594 YP_001171464.1 CDS PST_0925 NC_009434.1 1029357 1030343 D Code: C; COG: COG1319; oxidoreductase, molybdopterin-binding subunit 1029357..1030343 Pseudomonas stutzeri A1501 5098595 YP_001171465.1 CDS PST_0926 NC_009434.1 1030340 1032541 D Code: C; COG: COG1529; aldehyde oxidase and xanthine dehydrogenase family protein 1030340..1032541 Pseudomonas stutzeri A1501 5098596 YP_001171466.1 CDS PST_0927 NC_009434.1 1032952 1034190 R Code: I; COG: COG1835; putative acyltransferase complement(1032952..1034190) Pseudomonas stutzeri A1501 5098597 YP_001171467.1 CDS PST_0928 NC_009434.1 1034334 1035413 D beta-lactamase 1034334..1035413 Pseudomonas stutzeri A1501 5098598 YP_001171468.1 CDS PST_0929 NC_009434.1 1035410 1036465 D hypothetical protein 1035410..1036465 Pseudomonas stutzeri A1501 5098599 YP_001171469.1 CDS PST_0930 NC_009434.1 1036501 1036905 R Code: S; COG: COG0599; carboxymuconolactone decarboxylase family protein complement(1036501..1036905) Pseudomonas stutzeri A1501 5098600 YP_001171470.1 CDS PST_0931 NC_009434.1 1036962 1037339 R Code: K; COG: COG0789; MerR family transcriptional regulator complement(1036962..1037339) Pseudomonas stutzeri A1501 5098601 YP_001171471.1 CDS PST_0932 NC_009434.1 1037336 1038463 R Code: J; COG: COG2813; nucleotide methyltransferase complement(1037336..1038463) Pseudomonas stutzeri A1501 5098602 YP_001171472.1 CDS PST_0933 NC_009434.1 1038560 1039336 D Code: C; COG: COG1018; oxidoreductase 1038560..1039336 Pseudomonas stutzeri A1501 5098603 YP_001171473.1 CDS gdhA NC_009434.1 1039435 1040688 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(1039435..1040688) Pseudomonas stutzeri A1501 5098604 YP_001171474.1 CDS PST_0935 NC_009434.1 1041050 1041835 R Code: T; COG: COG2199; hypothetical protein complement(1041050..1041835) Pseudomonas stutzeri A1501 5098605 YP_001171475.1 CDS PST_0936 NC_009434.1 1041848 1042225 R hypothetical protein complement(1041848..1042225) Pseudomonas stutzeri A1501 5098606 YP_001171476.1 CDS PST_0937 NC_009434.1 1042243 1042785 R hypothetical protein complement(1042243..1042785) Pseudomonas stutzeri A1501 5098607 YP_001171477.1 CDS PST_0938 NC_009434.1 1042801 1044792 R hypothetical protein complement(1042801..1044792) Pseudomonas stutzeri A1501 5098608 YP_001171478.1 CDS PST_0939 NC_009434.1 1044954 1046723 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(1044954..1046723) Pseudomonas stutzeri A1501 5098609 YP_001171479.1 CDS glyA NC_009434.1 1046877 1048130 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1046877..1048130 Pseudomonas stutzeri A1501 5098610 YP_001171480.1 CDS PST_0941 NC_009434.1 1048272 1048733 D Code: O; COG: COG2020; putative protein-S-isoprenylcysteine methyltransferase 1048272..1048733 Pseudomonas stutzeri A1501 5098611 YP_001171481.1 CDS PST_0942 NC_009434.1 1048790 1049158 D carbamoylphosphate synthase large subunit (split gene in MJ) 1048790..1049158 Pseudomonas stutzeri A1501 5098612 YP_001171482.1 CDS radA NC_009434.1 1049162 1050523 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(1049162..1050523) Pseudomonas stutzeri A1501 5098613 YP_001171483.1 CDS PST_0944 NC_009434.1 1050640 1051074 D putative copper export protein 1050640..1051074 Pseudomonas stutzeri A1501 5098614 YP_001171484.1 CDS PST_0945 NC_009434.1 1051132 1051401 R Code: S; COG: COG2841; hypothetical protein complement(1051132..1051401) Pseudomonas stutzeri A1501 5098615 YP_001171485.1 CDS mscL NC_009434.1 1051609 1052031 D Code: M; COG: COG1970; large conductance mechanosensitive channel protein 1051609..1052031 Pseudomonas stutzeri A1501 5098616 YP_001171486.1 CDS ccpR NC_009434.1 1052080 1053072 R Code: P; COG: COG1858; cytochrome c551 peroxidase complement(1052080..1053072) Pseudomonas stutzeri A1501 5098617 YP_001171487.1 CDS PST_0948 NC_009434.1 1053535 1055814 D Code: O; COG: COG1067; ATP-dependent protease 1053535..1055814 Pseudomonas stutzeri A1501 5098618 YP_001171488.1 CDS PST_0949 NC_009434.1 1055882 1056316 D hypothetical protein 1055882..1056316 Pseudomonas stutzeri A1501 5098619 YP_001171489.1 CDS PST_0950 NC_009434.1 1056471 1056959 D Code: S; COG: COG2862; hypothetical protein 1056471..1056959 Pseudomonas stutzeri A1501 5098620 YP_001171490.1 CDS PST_0951 NC_009434.1 1057047 1057352 D hypothetical protein 1057047..1057352 Pseudomonas stutzeri A1501 5098621 YP_001171491.1 CDS PST_0952 NC_009434.1 1057387 1058922 D Code: R; COG: COG3046; hypothetical protein 1057387..1058922 Pseudomonas stutzeri A1501 5098622 YP_001171492.1 CDS fklB-1 NC_009434.1 1059120 1059737 D Code: O; COG: COG0545; peptidyl-prolyl cis-trans isomerase, FKBP-type 1059120..1059737 Pseudomonas stutzeri A1501 5098623 YP_001171493.1 CDS PST_0954 NC_009434.1 1059847 1060074 R hypothetical protein complement(1059847..1060074) Pseudomonas stutzeri A1501 5098624 YP_001171494.1 CDS ispB NC_009434.1 1060220 1061188 R Code: H; COG: COG0142; octylprenyl diphosphate synthase complement(1060220..1061188) Pseudomonas stutzeri A1501 5098625 YP_001171495.1 CDS rplU NC_009434.1 1061280 1061741 D Code: J; COG: COG0261; 50S ribosomal protein L21 1061280..1061741 Pseudomonas stutzeri A1501 5098626 YP_001171496.1 CDS rpmA NC_009434.1 1061777 1062034 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1061777..1062034 Pseudomonas stutzeri A1501 5098627 YP_001171497.1 CDS obgE NC_009434.1 1062192 1063409 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1062192..1063409 Pseudomonas stutzeri A1501 5098628 YP_001171498.1 CDS proB NC_009434.1 1063516 1064634 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1063516..1064634 Pseudomonas stutzeri A1501 5098629 YP_001171499.1 CDS creA NC_009434.1 1064643 1065107 D Code: S; COG: COG3045; CreA family protein 1064643..1065107 Pseudomonas stutzeri A1501 5098630 YP_001171500.1 CDS rpsT NC_009434.1 1065197 1065475 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(1065197..1065475) Pseudomonas stutzeri A1501 5098631 YP_001171501.1 CDS PST_0962 NC_009434.1 1065697 1067244 D Code: R; COG: COG0728; MviN family membrane protein 1065697..1067244 Pseudomonas stutzeri A1501 5098632 YP_001171502.1 CDS ribF NC_009434.1 1067329 1068279 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1067329..1068279 Pseudomonas stutzeri A1501 5098633 YP_001171503.1 CDS ileS NC_009434.1 1068281 1071112 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1068281..1071112 Pseudomonas stutzeri A1501 5098634 YP_001171504.1 CDS lspA NC_009434.1 1071224 1071727 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1071224..1071727 Pseudomonas stutzeri A1501 5098635 YP_001171505.1 CDS fkpB NC_009434.1 1071720 1072157 D Code: O; COG: COG1047; peptidyl-prolyl cis-trans isomerase, FKBP-type 1071720..1072157 Pseudomonas stutzeri A1501 5098636 YP_001171506.1 CDS ispH NC_009434.1 1072463 1073221 D Code: IM; COG: COG0761; hydroxymethylbutenyl pyrophosphate reductase 1072463..1073221 Pseudomonas stutzeri A1501 5098637 YP_001171507.1 CDS pilE NC_009434.1 1073301 1073708 R Code: NU; COG: COG4968; type 4 fimbrial biogenesis protein PilE complement(1073301..1073708) Pseudomonas stutzeri A1501 5098638 YP_001171508.1 CDS pilY2 NC_009434.1 1073701 1074030 R type 4 fimbrial biogenesis protein PilY2 complement(1073701..1074030) Pseudomonas stutzeri A1501 5098639 YP_001171509.1 CDS pilY1 NC_009434.1 1074033 1077425 R Code: NU; COG: COG3419; type 4 fimbrial biogenesis protein PilY1 complement(1074033..1077425) Pseudomonas stutzeri A1501 5098640 YP_001171510.1 CDS pilX NC_009434.1 1077552 1078106 R Code: NU; COG: COG4726; type 4 fimbrial biogenesis protein PilX complement(1077552..1078106) Pseudomonas stutzeri A1501 5098641 YP_001171511.1 CDS pilW NC_009434.1 1078103 1078840 R Code: NU; COG: COG4966; type 4 fimbrial biogenesis protein PilW complement(1078103..1078840) Pseudomonas stutzeri A1501 5098642 YP_001171512.1 CDS pilV NC_009434.1 1078851 1079432 R Code: NU; COG: COG4967; type 4 fimbrial biogenesis protein PilV complement(1078851..1079432) Pseudomonas stutzeri A1501 5098643 YP_001171513.1 CDS fimU NC_009434.1 1079441 1079977 R Code: NU; COG: COG4970; type 4 fimbrial biogenesis protein FimU complement(1079441..1079977) Pseudomonas stutzeri A1501 5098644 YP_001171514.1 CDS fimT NC_009434.1 1080071 1080565 R Code: NU; COG: COG4970; type 4 fimbrial biogenesis protein FimT complement(1080071..1080565) Pseudomonas stutzeri A1501 5098645 YP_001171515.1 CDS PST_0976 NC_009434.1 1080888 1081748 D Code: E; COG: COG0665; oxidoreductase, FAD-binding 1080888..1081748 Pseudomonas stutzeri A1501 5098646 YP_001171516.1 CDS PST_0977 NC_009434.1 1081898 1082269 D Code: J; COG: COG0023; translation initiation factor SUI1 1081898..1082269 Pseudomonas stutzeri A1501 5098647 YP_001171517.1 CDS speA NC_009434.1 1082393 1084306 D catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1082393..1084306 Pseudomonas stutzeri A1501 5098648 YP_001171518.1 CDS PST_0979 NC_009434.1 1084320 1084778 R Code: S; COG: COG3556; hypothetical protein complement(1084320..1084778) Pseudomonas stutzeri A1501 5098649 YP_001171519.1 CDS dinF NC_009434.1 1084781 1086154 R Code: V; COG: COG0534; DNA-damage-inducible protein F complement(1084781..1086154) Pseudomonas stutzeri A1501 5098650 YP_001171520.1 CDS PST_0981 NC_009434.1 1086251 1086544 R hypothetical protein complement(1086251..1086544) Pseudomonas stutzeri A1501 5098651 YP_001171521.1 CDS PST_0982 NC_009434.1 1086769 1087704 D Code: S; COG: COG3204; hypothetical protein 1086769..1087704 Pseudomonas stutzeri A1501 5098652 YP_001171522.1 CDS PST_0983 NC_009434.1 1087726 1088175 R Code: S; COG: COG3238; hypothetical protein complement(1087726..1088175) Pseudomonas stutzeri A1501 5098653 YP_001171523.1 CDS PST_0984 NC_009434.1 1088260 1088817 R putative lipoprotein complement(1088260..1088817) Pseudomonas stutzeri A1501 5098654 YP_001171524.1 CDS PST_0985 NC_009434.1 1088891 1089499 R putative lipoprotein complement(1088891..1089499) Pseudomonas stutzeri A1501 5098655 YP_001171525.1 CDS PST_0986 NC_009434.1 1089518 1090600 R Code: QR; COG: COG0500; methyltransferase complement(1089518..1090600) Pseudomonas stutzeri A1501 5098656 YP_001171526.1 CDS fruR NC_009434.1 1090636 1091625 R binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR complement(1090636..1091625) Pseudomonas stutzeri A1501 5098657 YP_001171527.1 CDS fruB NC_009434.1 1091804 1094686 D phosphotransferase system, fructose-specific EI/HPr/EIIA component 1091804..1094686 Pseudomonas stutzeri A1501 5098658 YP_001171528.1 CDS fruK NC_009434.1 1094686 1095621 D Code: G; COG: COG1105; 1-phosphofructokinase 1094686..1095621 Pseudomonas stutzeri A1501 5098659 YP_001171529.1 CDS fruA NC_009434.1 1095639 1097378 D phosphotransferase system, fructose-specific IIBC component 1095639..1097378 Pseudomonas stutzeri A1501 5098660 YP_001171530.1 CDS PST_0991 NC_009434.1 1097501 1099891 D Code: G; COG: COG4993; glucose dehydrogenase 1097501..1099891 Pseudomonas stutzeri A1501 5098661 YP_001171531.1 CDS PST_0992 NC_009434.1 1100373 1100741 R Code: S; COG: COG2852; hypothetical protein complement(1100373..1100741) Pseudomonas stutzeri A1501 5098662 YP_001171532.1 CDS prfC NC_009434.1 1100777 1102360 R stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 complement(1100777..1102360) Pseudomonas stutzeri A1501 5098663 YP_001171533.1 CDS PST_0994 NC_009434.1 1102766 1103929 D Code: E; COG: COG0019; ornithine decarboxylase 1102766..1103929 Pseudomonas stutzeri A1501 5098664 YP_001171534.1 CDS PST_0995 NC_009434.1 1104746 1105426 R Code: S; COG: COG3128; putative hydroxylase complement(1104746..1105426) Pseudomonas stutzeri A1501 5098665 YP_001171535.1 CDS PST_0996 NC_009434.1 1105564 1107825 D Code: P; COG: COG4774; TonB-dependent siderophore receptor 1105564..1107825 Pseudomonas stutzeri A1501 5098666 YP_001171536.1 CDS PST_0997 NC_009434.1 1107885 1109330 R Code: P; COG: COG0369; sulfite reductase (NADPH) flavoprotein alpha-component complement(1107885..1109330) Pseudomonas stutzeri A1501 5098667 YP_001171537.1 CDS PST_0998 NC_009434.1 1109509 1110381 R Co2+ ABC transporter periplasmic protein complement(1109509..1110381) Pseudomonas stutzeri A1501 5098668 YP_001171538.1 CDS PST_0999 NC_009434.1 1110396 1110890 R Code: S; COG: COG3656; hypothetical protein complement(1110396..1110890) Pseudomonas stutzeri A1501 5098669 YP_001171539.1 CDS PST_1000 NC_009434.1 1110915 1111592 R Code: S; COG: COG3295; hypothetical protein complement(1110915..1111592) Pseudomonas stutzeri A1501 5098670 YP_001171540.1 CDS PST_1001 NC_009434.1 1111666 1113888 R Code: P; COG: COG4771; putative outer membrane receptor complement(1111666..1113888) Pseudomonas stutzeri A1501 5098671 YP_001171541.1 CDS PST_1002 NC_009434.1 1114067 1114771 R Code: S; COG: COG3471; hypothetical protein complement(1114067..1114771) Pseudomonas stutzeri A1501 5098672 YP_001171542.1 CDS PST_1003 NC_009434.1 1114925 1116178 D Code: T; COG: COG0642; two-component sensor 1114925..1116178 Pseudomonas stutzeri A1501 5098673 YP_001171543.1 CDS PST_1004 NC_009434.1 1116212 1116772 D Code: TK; COG: COG4567; two-component response regulator 1116212..1116772 Pseudomonas stutzeri A1501 5098674 YP_001171544.1 CDS PST_1005 NC_009434.1 1116900 1117841 D Code: R; COG: COG0679; hypothetical protein 1116900..1117841 Pseudomonas stutzeri A1501 5098675 YP_001171545.1 CDS PST_1006 NC_009434.1 1118018 1119013 D Code: M; COG: COG0739; peptidase 1118018..1119013 Pseudomonas stutzeri A1501 5098676 YP_001171546.1 CDS PST_1007 NC_009434.1 1118994 1119350 D hypothetical protein 1118994..1119350 Pseudomonas stutzeri A1501 5098677 YP_001171547.1 CDS PST_1008 NC_009434.1 1119367 1119792 D Code: M; COG: COG1664; cell shape determination protein CcmA 1119367..1119792 Pseudomonas stutzeri A1501 5098678 YP_001171548.1 CDS PST_1009 NC_009434.1 1119832 1120908 R Code: P; COG: COG0530; Ca2+/Na+ antiporter complement(1119832..1120908) Pseudomonas stutzeri A1501 5098679 YP_001171549.1 CDS PST_1010 NC_009434.1 1120952 1122037 R Code: P; COG: COG0530; K+-dependent Na+/Ca+ exchanger-like protein complement(1120952..1122037) Pseudomonas stutzeri A1501 5098680 YP_001171550.1 CDS PST_1011 NC_009434.1 1122108 1122608 R Code: M; COG: COG0797; lipoprotein complement(1122108..1122608) Pseudomonas stutzeri A1501 5098681 YP_001171551.1 CDS gatB NC_009434.1 1122648 1124093 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(1122648..1124093) Pseudomonas stutzeri A1501 5098682 YP_001171552.1 CDS gatA NC_009434.1 1124107 1125573 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(1124107..1125573) Pseudomonas stutzeri A1501 5098683 YP_001171553.2 CDS gatC NC_009434.1 1125573 1125860 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(1125573..1125860) Pseudomonas stutzeri A1501 5098684 YP_001171554.1 CDS mreB NC_009434.1 1126158 1127216 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1126158..1127216 Pseudomonas stutzeri A1501 5098685 YP_001171555.1 CDS mreC NC_009434.1 1127360 1128313 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1127360..1128313 Pseudomonas stutzeri A1501 5098686 YP_001171556.1 CDS mreD NC_009434.1 1128310 1128798 D Code: M; COG: COG2891; rod shape-determining protein MreD 1128310..1128798 Pseudomonas stutzeri A1501 5098687 YP_001171557.1 CDS PST_1018 NC_009434.1 1128978 1130126 D hypothetical protein 1128978..1130126 Pseudomonas stutzeri A1501 5098688 YP_001171558.1 CDS maf-2 NC_009434.1 1130226 1130816 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1130226..1130816 Pseudomonas stutzeri A1501 5098689 YP_001171559.1 CDS cafA NC_009434.1 1130904 1132361 D Code: J; COG: COG1530; cytoplasmic axial filament protein 1130904..1132361 Pseudomonas stutzeri A1501 5098690 YP_001171560.1 CDS PST_1021 NC_009434.1 1132411 1136211 D Code: S; COG: COG3164; hypothetical protein 1132411..1136211 Pseudomonas stutzeri A1501 5098691 YP_001171561.1 CDS PST_1022 NC_009434.1 1136255 1137100 D Code: R; COG: COG0388; carbon-nitrogen hydrolase family protein 1136255..1137100 Pseudomonas stutzeri A1501 5098692 YP_001171562.1 CDS PST_1023 NC_009434.1 1137103 1138545 D Code: R; COG: COG0312; C69 family peptidase 1137103..1138545 Pseudomonas stutzeri A1501 5098693 YP_001171563.1 CDS PST_1025 NC_009434.1 1138602 1139123 R Code: S; COG: COG3028; hypothetical protein complement(1138602..1139123) Pseudomonas stutzeri A1501 5098694 YP_001171564.1 CDS PST_1024 NC_009434.1 1138692 1139207 D hypothetical protein 1138692..1139207 Pseudomonas stutzeri A1501 5098695 YP_001171565.1 CDS pmbA NC_009434.1 1139239 1140585 D Code: R; COG: COG0312; PmbA protein 1139239..1140585 Pseudomonas stutzeri A1501 5098696 YP_001171566.1 CDS ptsO NC_009434.1 1140636 1140908 R Code: G; COG: COG1925; putative phosphocarrier protein complement(1140636..1140908) Pseudomonas stutzeri A1501 5098697 YP_001171567.1 CDS PST_1028 NC_009434.1 1140923 1141780 R Code: R; COG: COG1660; hypothetical protein complement(1140923..1141780) Pseudomonas stutzeri A1501 5098698 YP_001171568.1 CDS ptsN NC_009434.1 1141796 1142260 R Code: GT; COG: COG1762; phosphotransferase enzyme IIA complement(1141796..1142260) Pseudomonas stutzeri A1501 5098699 YP_001171569.1 CDS rpoX NC_009434.1 1142269 1142577 R Code: J; COG: COG1544; sigma54 modulation protein complement(1142269..1142577) Pseudomonas stutzeri A1501 5098700 YP_001171570.1 CDS rpoN NC_009434.1 1142652 1144025 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(1142652..1144025) Pseudomonas stutzeri A1501 5098701 YP_001171571.1 CDS PST_1032 NC_009434.1 1144307 1145032 R Code: R; COG: COG1137; ABC transporter ATP-binding protein complement(1144307..1145032) Pseudomonas stutzeri A1501 5098702 YP_001171572.1 CDS PST_1033 NC_009434.1 1145032 1145577 R Code: S; COG: COG1934; OstA family protein complement(1145032..1145577) Pseudomonas stutzeri A1501 5098703 YP_001171573.1 CDS PST_1034 NC_009434.1 1145564 1146043 R Code: S; COG: COG3117; hypothetical protein complement(1145564..1146043) Pseudomonas stutzeri A1501 5098704 YP_001171574.1 CDS PST_1035 NC_009434.1 1146145 1146669 R Code: R; COG: COG1778; YrbI family phosphatase complement(1146145..1146669) Pseudomonas stutzeri A1501 5098705 YP_001171575.1 CDS PST_1036 NC_009434.1 1146669 1147625 R Code: M; COG: COG0794; sugar isomerase complement(1146669..1147625) Pseudomonas stutzeri A1501 5098706 YP_001171576.1 CDS ttg2A NC_009434.1 1147924 1148739 D Code: Q; COG: COG1127; toluene tolerance ABC efflux transporter, ATP-binding protein 1147924..1148739 Pseudomonas stutzeri A1501 5098707 YP_001171577.1 CDS ttg2B NC_009434.1 1148732 1149529 D Code: Q; COG: COG0767; toluene tolerance ABC efflux transporter, permease 1148732..1149529 Pseudomonas stutzeri A1501 5098708 YP_001171578.1 CDS ttg2C NC_009434.1 1149529 1149987 D Code: Q; COG: COG1463; toluene tolerance ABC transporter periplasmic substrate-binding protein 1149529..1149987 Pseudomonas stutzeri A1501 5098709 YP_001171579.1 CDS ttg2D NC_009434.1 1149999 1150646 D Code: Q; COG: COG2854; toluene-tolerance protein 1149999..1150646 Pseudomonas stutzeri A1501 5098710 YP_001171580.1 CDS ttg2E NC_009434.1 1150639 1150953 D Code: T; COG: COG1366; toluene-tolerance protein 1150639..1150953 Pseudomonas stutzeri A1501 5098711 YP_001171581.1 CDS PST_1042 NC_009434.1 1150967 1151458 D Code: S; COG: COG3223; hypothetical protein 1150967..1151458 Pseudomonas stutzeri A1501 5098712 YP_001171582.1 CDS ttg2F NC_009434.1 1151550 1151789 D Code: K; COG: COG5007; toluene-tolerance protein 1151550..1151789 Pseudomonas stutzeri A1501 5098713 YP_001171583.1 CDS murA NC_009434.1 1151893 1153158 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1151893..1153158 Pseudomonas stutzeri A1501 5098714 YP_001171584.1 CDS hisG NC_009434.1 1153282 1154028 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 1153282..1154028 Pseudomonas stutzeri A1501 5098715 YP_001171585.1 CDS hisD NC_009434.1 1154321 1155628 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1154321..1155628 Pseudomonas stutzeri A1501 5098716 YP_001171586.1 CDS hisC NC_009434.1 1155741 1156787 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1155741..1156787 Pseudomonas stutzeri A1501 5098717 YP_001171587.1 CDS algW NC_009434.1 1156834 1157985 R Code: O; COG: COG0265; HtrA-like protease AlgW complement(1156834..1157985) Pseudomonas stutzeri A1501 5098718 YP_001171588.1 CDS PST_1049 NC_009434.1 1158139 1158897 D Code: S; COG: COG0327; hypothetical protein 1158139..1158897 Pseudomonas stutzeri A1501 5098719 YP_001171589.1 CDS cysD NC_009434.1 1159086 1160003 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1159086..1160003 Pseudomonas stutzeri A1501 5098720 YP_001171590.1 CDS cysN NC_009434.1 1160015 1161913 D in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase 1160015..1161913 Pseudomonas stutzeri A1501 5098721 YP_001171591.1 CDS PST_1052 NC_009434.1 1162246 1162800 R Code: L; COG: COG1943; transposase and inactivated derivative complement(1162246..1162800) Pseudomonas stutzeri A1501 5098722 YP_001171592.1 CDS PST_1053 NC_009434.1 1162860 1163450 D hypothetical protein 1162860..1163450 Pseudomonas stutzeri A1501 5098723 YP_001171593.1 CDS PST_1054 NC_009434.1 1163755 1164267 R Code: NU; COG: COG4969; fimbrial protein ecpC complement(1163755..1164267) Pseudomonas stutzeri A1501 5098724 YP_001171594.1 CDS pilB NC_009434.1 1164577 1166280 D Code: NU; COG: COG2804; type 4 fimbrial biogenesis protein PilB 1164577..1166280 Pseudomonas stutzeri A1501 5098725 YP_001171595.1 CDS pilC NC_009434.1 1166282 1167499 D Code: NU; COG: COG1459; type 4 pilus biogenesis protein PilC 1166282..1167499 Pseudomonas stutzeri A1501 5098726 YP_001171596.1 CDS pilD NC_009434.1 1167502 1168371 D Code: NOU; COG: COG1989; type 4 prepilin peptidase PilD 1167502..1168371 Pseudomonas stutzeri A1501 5098727 YP_001171597.1 CDS coaE NC_009434.1 1168308 1169111 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1168308..1169111 Pseudomonas stutzeri A1501 5098728 YP_001171598.1 CDS PST_1059 NC_009434.1 1169318 1169998 R Code: S; COG: COG3235; hypothetical protein complement(1169318..1169998) Pseudomonas stutzeri A1501 5098729 YP_001171599.1 CDS PST_1060 NC_009434.1 1170055 1171095 R Code: C; COG: COG0667; oxidoreductase complement(1170055..1171095) Pseudomonas stutzeri A1501 5098730 YP_001171600.1 CDS rplM NC_009434.1 1171510 1171938 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1171510..1171938 Pseudomonas stutzeri A1501 5098731 YP_001171601.1 CDS rpsI NC_009434.1 1171954 1172346 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1171954..1172346 Pseudomonas stutzeri A1501 5098732 YP_001171602.1 CDS petA NC_009434.1 1172601 1173194 D Code: C; COG: COG0723; ubiquinol--cytochrome c reductase, iron-sulfur subunit 1172601..1173194 Pseudomonas stutzeri A1501 5098733 YP_001171603.1 CDS petB NC_009434.1 1173194 1174405 D Code: C; COG: COG1290; ubiquinol--cytochrome c reductase, cytochrome b 1173194..1174405 Pseudomonas stutzeri A1501 5098734 YP_001171604.1 CDS petC NC_009434.1 1174405 1175184 D Code: C; COG: COG2857; ubiquinol--cytochrome c reductase, cytochrome c1 1174405..1175184 Pseudomonas stutzeri A1501 5098735 YP_001171605.1 CDS sspA NC_009434.1 1175270 1175887 D Code: O; COG: COG0625; stringent starvation protein A 1175270..1175887 Pseudomonas stutzeri A1501 5098736 YP_001171606.1 CDS sspB NC_009434.1 1175900 1176307 D Code: R; COG: COG2969; ClpXP protease specificity-enhancing factor 1175900..1176307 Pseudomonas stutzeri A1501 5098737 YP_001171607.1 CDS PST_1068 NC_009434.1 1176346 1176924 R Code: R; COG: COG2823; putative lipoprotein complement(1176346..1176924) Pseudomonas stutzeri A1501 5098738 YP_001171608.1 CDS gmhA NC_009434.1 1176921 1177451 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(1176921..1177451) Pseudomonas stutzeri A1501 5098739 YP_001171609.1 CDS PST_1070 NC_009434.1 1177627 1177989 R distantly related to archaeal Holliday junction resolvase; Code: L; COG: COG0792; hypothetical protein complement(1177627..1177989) Pseudomonas stutzeri A1501 5098740 YP_001171610.1 CDS PST_1071 NC_009434.1 1177989 1179791 R Code: R; COG: COG3107; putative lipoprotein complement(1177989..1179791) Pseudomonas stutzeri A1501 5098741 YP_001171611.1 CDS PST_1072 NC_009434.1 1179820 1180776 D Code: R; COG: COG0313; tetrapyrrole methylase family protein 1179820..1180776 Pseudomonas stutzeri A1501 5098742 YP_001171612.1 CDS PST_1073 NC_009434.1 1181542 1181946 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1181542..1181946 Pseudomonas stutzeri A1501 5098743 YP_001171613.1 CDS mraW NC_009434.1 1182009 1182890 D Code: M; COG: COG0275; S-adenosyl-methyltransferase MraW 1182009..1182890 Pseudomonas stutzeri A1501 5098744 YP_001171614.1 CDS ftsL NC_009434.1 1182887 1183177 D Code: D; COG: COG3116; cell division protein FtsL 1182887..1183177 Pseudomonas stutzeri A1501 5098745 YP_001171615.1 CDS ftsI NC_009434.1 1183177 1184904 D Code: M; COG: COG0768; penicillin-binding protein 3 1183177..1184904 Pseudomonas stutzeri A1501 5098746 YP_001171616.1 CDS murE NC_009434.1 1184904 1186367 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1184904..1186367 Pseudomonas stutzeri A1501 5098747 YP_001171617.1 CDS murF NC_009434.1 1186360 1187736 D Code: M; COG: COG0770; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase 1186360..1187736 Pseudomonas stutzeri A1501 5098748 YP_001171618.1 CDS mraY NC_009434.1 1187736 1188818 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1187736..1188818 Pseudomonas stutzeri A1501 5098749 YP_001171619.1 CDS murD NC_009434.1 1188825 1190168 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1188825..1190168 Pseudomonas stutzeri A1501 5098750 YP_001171620.1 CDS ftsW NC_009434.1 1190168 1191391 D Code: D; COG: COG0772; cell division protein FtsW 1190168..1191391 Pseudomonas stutzeri A1501 5098751 YP_001171621.1 CDS murG NC_009434.1 1191381 1192451 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1191381..1192451 Pseudomonas stutzeri A1501 5098752 YP_001171622.1 CDS murC NC_009434.1 1192444 1193901 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1192444..1193901 Pseudomonas stutzeri A1501 5098753 YP_001171623.1 CDS ddl NC_009434.1 1193898 1194842 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 1193898..1194842 Pseudomonas stutzeri A1501 5098754 YP_001171624.1 CDS ftsQ NC_009434.1 1194846 1195703 D Code: M; COG: COG1589; cell division protein FtsQ 1194846..1195703 Pseudomonas stutzeri A1501 5098755 YP_001171625.1 CDS ftsA NC_009434.1 1195716 1196963 D Code: D; COG: COG0849; cell division protein FtsA 1195716..1196963 Pseudomonas stutzeri A1501 5098756 YP_001171626.1 CDS ftsZ NC_009434.1 1197012 1198193 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1197012..1198193 Pseudomonas stutzeri A1501 5097174 YP_001171627.2 CDS lpxC NC_009434.1 1198309 1199220 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1198309..1199220 Pseudomonas stutzeri A1501 5097175 YP_001171628.1 CDS PST_1089 NC_009434.1 1199371 1200573 D Code: L; COG: COG3464; transposase for insertion sequence element IS1001 1199371..1200573 Pseudomonas stutzeri A1501 5097176 YP_001171629.1 CDS PST_1090 NC_009434.1 1200612 1201145 R Code: P; COG: COG2193; bacterioferritin complement(1200612..1201145) Pseudomonas stutzeri A1501 5097177 YP_001171630.1 CDS PST_1091 NC_009434.1 1201371 1201769 R Code: R; COG: COG3668; plasmid stabilization system protein complement(1201371..1201769) Pseudomonas stutzeri A1501 5097178 YP_001171631.1 CDS osmE NC_009434.1 1201821 1202162 R osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE complement(1201821..1202162) Pseudomonas stutzeri A1501 5097179 YP_001171632.1 CDS PST_1093 NC_009434.1 1202220 1203563 R Code: G; COG: COG2133; L-sorbosone dehydrogenase complement(1202220..1203563) Pseudomonas stutzeri A1501 5097180 YP_001171633.1 CDS PST_1094 NC_009434.1 1203587 1204105 R Code: S; COG: COG1285; Mg2+ transporter complement(1203587..1204105) Pseudomonas stutzeri A1501 5097181 YP_001171634.1 CDS PST_1095 NC_009434.1 1204164 1205186 R hypothetical protein complement(1204164..1205186) Pseudomonas stutzeri A1501 5097182 YP_001171635.1 CDS PST_1096 NC_009434.1 1205343 1205828 R Code: S; COG: COG4875; hypothetical protein complement(1205343..1205828) Pseudomonas stutzeri A1501 5097183 YP_001171636.1 CDS PST_1097 NC_009434.1 1205919 1206413 R hypothetical protein complement(1205919..1206413) Pseudomonas stutzeri A1501 5097184 YP_001171637.1 CDS PST_1098 NC_009434.1 1206779 1207366 R Code: R; COG: COG1611; hypothetical protein complement(1206779..1207366) Pseudomonas stutzeri A1501 5097185 YP_001171638.1 CDS PST_1099 NC_009434.1 1208080 1208991 D Code: IQR; COG: COG1028; short-chain dehydrogenase 1208080..1208991 Pseudomonas stutzeri A1501 5097186 YP_001171639.1 CDS PST_1100 NC_009434.1 1209037 1210767 R putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; putative sulfate transporter YchM complement(1209037..1210767) Pseudomonas stutzeri A1501 5097187 YP_001171640.1 CDS PST_1101 NC_009434.1 1210961 1211248 D hypothetical protein 1210961..1211248 Pseudomonas stutzeri A1501 5097188 YP_001171641.1 CDS mqoB NC_009434.1 1211655 1213091 D malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 1211655..1213091 Pseudomonas stutzeri A1501 5097189 YP_001171642.1 CDS PST_1103 NC_009434.1 1213166 1213369 R hypothetical protein complement(1213166..1213369) Pseudomonas stutzeri A1501 5097190 YP_001171643.1 CDS PST_1104 NC_009434.1 1213532 1214116 D putative lipoprotein 1213532..1214116 Pseudomonas stutzeri A1501 5097191 YP_001171644.1 CDS PST_1105 NC_009434.1 1214246 1215739 R hypothetical protein complement(1214246..1215739) Pseudomonas stutzeri A1501 5097192 YP_001171645.1 CDS PST_1106 NC_009434.1 1215949 1216221 D hypothetical protein 1215949..1216221 Pseudomonas stutzeri A1501 5097193 YP_001171646.1 CDS PST_1108 NC_009434.1 1216231 1217397 R glycerol-3-phosphate O-acyltransferase complement(1216231..1217397) Pseudomonas stutzeri A1501 5097194 YP_001171647.1 CDS PST_1107 NC_009434.1 1217293 1217817 D hypothetical protein 1217293..1217817 Pseudomonas stutzeri A1501 5097195 YP_001171648.1 CDS PST_1109 NC_009434.1 1217817 1218077 D hypothetical protein 1217817..1218077 Pseudomonas stutzeri A1501 5097196 YP_001171649.1 CDS PST_1110 NC_009434.1 1218088 1218705 D Code: S; COG: COG2135; hypothetical protein 1218088..1218705 Pseudomonas stutzeri A1501 5097197 YP_001171650.1 CDS PST_1113 NC_009434.1 1220976 1221794 D Code: O; COG: COG0501; putative lipoprotein 1220976..1221794 Pseudomonas stutzeri A1501 5097199 YP_001171651.1 CDS PST_1114 NC_009434.1 1221815 1222258 R hypothetical protein complement(1221815..1222258) Pseudomonas stutzeri A1501 5097200 YP_001171652.1 CDS PST_1115 NC_009434.1 1222343 1222930 R Code: S; COG: COG2119; hypothetical protein complement(1222343..1222930) Pseudomonas stutzeri A1501 5097201 YP_001171653.1 CDS rsmC NC_009434.1 1223192 1224190 R Code: J; COG: COG2813; ribosomal RNA small subunit methyltransferase C complement(1223192..1224190) Pseudomonas stutzeri A1501 5097202 YP_001171654.1 CDS hprA NC_009434.1 1224262 1225224 R Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; glycerate dehydrogenase complement(1224262..1225224) Pseudomonas stutzeri A1501 5097203 YP_001171655.1 CDS PST_1118 NC_009434.1 1225311 1225922 D Code: E; COG: COG1280; amino acid transporter LysE 1225311..1225922 Pseudomonas stutzeri A1501 5097204 YP_001171656.1 CDS alkK-1 NC_009434.1 1226020 1227711 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1226020..1227711 Pseudomonas stutzeri A1501 5097205 YP_001171657.1 CDS PST_1120 NC_009434.1 1227722 1229758 R sensory box histidine kinase/response regulator complement(1227722..1229758) Pseudomonas stutzeri A1501 5097206 YP_001171658.1 CDS PST_1121 NC_009434.1 1229937 1230581 D Code: R; COG: COG0491; metallo-beta-lactamase family protein 1229937..1230581 Pseudomonas stutzeri A1501 5097207 YP_001171659.1 CDS PST_1122 NC_009434.1 1230720 1231373 D Code: M; COG: COG2885; OmpA family protein 1230720..1231373 Pseudomonas stutzeri A1501 5097208 YP_001171660.1 CDS PST_1123 NC_009434.1 1231521 1235240 D sensor histidine kinase/response regulator 1231521..1235240 Pseudomonas stutzeri A1501 5097209 YP_001171661.1 CDS PST_1124 NC_009434.1 1235367 1237490 D response regulator/sensory box/GGDEF domain/EAL domain-containing protein 1235367..1237490 Pseudomonas stutzeri A1501 5097210 YP_001171662.1 CDS PST_1125 NC_009434.1 1237495 1238403 R Code: I; COG: COG0204; putative acyltransferase complement(1237495..1238403) Pseudomonas stutzeri A1501 5097211 YP_001171663.1 CDS pta NC_009434.1 1238536 1240632 R catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase complement(1238536..1240632) Pseudomonas stutzeri A1501 5097212 YP_001171664.1 CDS PST_1127 NC_009434.1 1240797 1241984 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(1240797..1241984) Pseudomonas stutzeri A1501 5097213 YP_001171665.1 CDS slyD NC_009434.1 1242223 1242708 D Code: O; COG: COG1047; peptidyl-prolyl cis-trans isomerase, FKBP-type 1242223..1242708 Pseudomonas stutzeri A1501 5097214 YP_001171666.1 CDS PST_1129 NC_009434.1 1242823 1243305 D Code: O; COG: COG0386; glutathione peroxidase 1242823..1243305 Pseudomonas stutzeri A1501 5097215 YP_001171667.1 CDS PST_1130 NC_009434.1 1243505 1244086 D Code: K; COG: COG1309; transcriptional regulator 1243505..1244086 Pseudomonas stutzeri A1501 5097216 YP_001171668.1 CDS PST_1131 NC_009434.1 1244106 1245215 D Code: C; COG: COG1902; oxidoreductase 1244106..1245215 Pseudomonas stutzeri A1501 5097217 YP_001171669.1 CDS cysZ NC_009434.1 1245388 1246143 R putative role in sulfur assimilation; putative sulfate transport protein CysZ complement(1245388..1246143) Pseudomonas stutzeri A1501 5097218 YP_001171670.1 CDS PST_1133 NC_009434.1 1246356 1246694 R type III effector complement(1246356..1246694) Pseudomonas stutzeri A1501 5097219 YP_001171671.1 CDS PST_1134 NC_009434.1 1246694 1247023 R Code: S; COG: COG3492; hypothetical protein complement(1246694..1247023) Pseudomonas stutzeri A1501 5097220 YP_001171672.1 CDS folX NC_009434.1 1247061 1247435 R catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase complement(1247061..1247435) Pseudomonas stutzeri A1501 5097221 YP_001171673.1 CDS PST_1136 NC_009434.1 1247453 1248157 R Code: IQR; COG: COG1028; short chain dehydrogenase complement(1247453..1248157) Pseudomonas stutzeri A1501 5097222 YP_001171674.1 CDS PST_1137 NC_009434.1 1248224 1248850 R hypothetical protein complement(1248224..1248850) Pseudomonas stutzeri A1501 5097223 YP_001171675.1 CDS PST_1138 NC_009434.1 1249066 1249518 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 1249066..1249518 Pseudomonas stutzeri A1501 5097224 YP_001171676.1 CDS PST_1139 NC_009434.1 1249625 1250401 D Code: G; COG: COG0235; aldolase II superfamily protein 1249625..1250401 Pseudomonas stutzeri A1501 5097225 YP_001171677.1 CDS PST_1140 NC_009434.1 1250414 1250983 R Code: S; COG: COG3124; hypothetical protein complement(1250414..1250983) Pseudomonas stutzeri A1501 5097226 YP_001171678.1 CDS PST_1141 NC_009434.1 1251022 1251816 R Code: I; COG: COG0204; acyltransferase complement(1251022..1251816) Pseudomonas stutzeri A1501 5097227 YP_001171679.1 CDS PST_1142 NC_009434.1 1251817 1252560 R Code: R; COG: COG3176; putative hemolysin complement(1251817..1252560) Pseudomonas stutzeri A1501 5097228 YP_001171680.1 CDS PST_1143 NC_009434.1 1252733 1253620 D Code: I; COG: COG1960; Acyl-CoA dehydrogenase 1252733..1253620 Pseudomonas stutzeri A1501 5097229 YP_001171681.1 CDS PST_1144 NC_009434.1 1253878 1255038 D Code: I; COG: COG1502; phospholipase 1253878..1255038 Pseudomonas stutzeri A1501 5097230 YP_001171682.1 CDS PST_1145 NC_009434.1 1254987 1255673 D Code: R; COG: COG0693; ThiJ/PfpI family protein 1254987..1255673 Pseudomonas stutzeri A1501 5097231 YP_001171683.1 CDS PST_1146 NC_009434.1 1255713 1255979 D Code: S; COG: COG4628; hypothetical protein 1255713..1255979 Pseudomonas stutzeri A1501 5097232 YP_001171684.1 CDS PST_1147 NC_009434.1 1256051 1257574 R Code: C; COG: COG1951; fumarase complement(1256051..1257574) Pseudomonas stutzeri A1501 5097233 YP_001171685.1 CDS PST_1148 NC_009434.1 1257770 1258900 D Code: T; COG: COG2199; hypothetical protein 1257770..1258900 Pseudomonas stutzeri A1501 5097234 YP_001171686.1 CDS PST_1149 NC_009434.1 1258806 1259840 D Code: HC; COG: COG0543; hypothetical protein 1258806..1259840 Pseudomonas stutzeri A1501 5097235 YP_001171687.1 CDS pykA NC_009434.1 1259892 1261340 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(1259892..1261340) Pseudomonas stutzeri A1501 5097236 YP_001171688.1 CDS PST_1151 NC_009434.1 1261491 1261868 D putative lipoprotein 1261491..1261868 Pseudomonas stutzeri A1501 5097237 YP_001171689.1 CDS PST_1152 NC_009434.1 1261895 1262317 D hypothetical protein 1261895..1262317 Pseudomonas stutzeri A1501 5097238 YP_001171690.1 CDS PST_1153 NC_009434.1 1262355 1262792 D hypothetical protein 1262355..1262792 Pseudomonas stutzeri A1501 5097239 YP_001171691.1 CDS PST_1154 NC_009434.1 1262820 1264151 R Code: R; COG: COG1721; hypothetical protein complement(1262820..1264151) Pseudomonas stutzeri A1501 5097240 YP_001171692.1 CDS PST_1155 NC_009434.1 1264148 1265161 R Code: R; COG: COG0714; MoxR protein, putative complement(1264148..1265161) Pseudomonas stutzeri A1501 5097241 YP_001171693.1 CDS PST_1156 NC_009434.1 1265158 1266330 R hypothetical protein complement(1265158..1266330) Pseudomonas stutzeri A1501 5097242 YP_001171694.1 CDS PST_1157 NC_009434.1 1266327 1267880 R hypothetical protein complement(1266327..1267880) Pseudomonas stutzeri A1501 5097243 YP_001171695.1 CDS PST_1158 NC_009434.1 1267867 1268847 R Code: S; COG: COG1300; integral membrane protein complement(1267867..1268847) Pseudomonas stutzeri A1501 5097244 YP_001171696.1 CDS PST_1159 NC_009434.1 1268844 1269557 R Code: S; COG: COG1714; hypothetical protein complement(1268844..1269557) Pseudomonas stutzeri A1501 5097245 YP_001171697.1 CDS sbcB NC_009434.1 1269778 1271211 D Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 1269778..1271211 Pseudomonas stutzeri A1501 5097246 YP_001171698.1 CDS mvaT NC_009434.1 1271344 1271751 R transcriptional regulator MvaT, P16 subunit complement(1271344..1271751) Pseudomonas stutzeri A1501 5097247 YP_001171699.1 CDS PST_1162 NC_009434.1 1271993 1272412 R transposase complement(1271993..1272412) Pseudomonas stutzeri A1501 5097248 YP_001171700.1 CDS PST_1163 NC_009434.1 1272524 1274029 R Code: L; COG: COG3344; putative reverse transcriptase-maturase-transposase complement(1272524..1274029) Pseudomonas stutzeri A1501 5097249 YP_001171701.1 CDS PST_1164 NC_009434.1 1274623 1275147 R transposase-like protein TnpA3 complement(1274623..1275147) Pseudomonas stutzeri A1501 5097250 YP_001171702.1 CDS purU NC_009434.1 1275467 1276300 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1275467..1276300 Pseudomonas stutzeri A1501 5097251 YP_001171703.1 CDS PST_1166 NC_009434.1 1276316 1276522 D hypothetical protein 1276316..1276522 Pseudomonas stutzeri A1501 5097252 YP_001171704.1 CDS PST_1167 NC_009434.1 1276544 1278019 D Code: R; COG: COG0433; hypothetical protein 1276544..1278019 Pseudomonas stutzeri A1501 5097253 YP_001171705.1 CDS PST_1168 NC_009434.1 1278080 1278403 R hypothetical protein complement(1278080..1278403) Pseudomonas stutzeri A1501 5097254 YP_001171706.1 CDS algA NC_009434.1 1278586 1280031 R Code: M; COG: COG0836; phosphomannose isomerase complement(1278586..1280031) Pseudomonas stutzeri A1501 5097255 YP_001171707.1 CDS PST_1170 NC_009434.1 1280770 1281549 R Code: S; COG: COG3022; hypothetical protein complement(1280770..1281549) Pseudomonas stutzeri A1501 5097256 YP_001171708.1 CDS PST_1171 NC_009434.1 1281685 1282668 D Code: P; COG: COG1230; metal transporter 1281685..1282668 Pseudomonas stutzeri A1501 5097257 YP_001171709.1 CDS PST_1172 NC_009434.1 1282926 1284314 D Code: T; COG: COG1875; PhoH family protein 1282926..1284314 Pseudomonas stutzeri A1501 5097258 YP_001171710.1 CDS moaC NC_009434.1 1284417 1284887 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1284417..1284887 Pseudomonas stutzeri A1501 5097259 YP_001171711.1 CDS moaD NC_009434.1 1284884 1285132 D Code: H; COG: COG1977; molybdopterin converting factor, small subunit 1284884..1285132 Pseudomonas stutzeri A1501 5097260 YP_001171712.1 CDS moaE NC_009434.1 1285135 1285593 D Code: H; COG: COG0314; molybdenum cofactor biosynthesis protein E 1285135..1285593 Pseudomonas stutzeri A1501 5097261 YP_001171713.1 CDS PST_1176 NC_009434.1 1285598 1285762 R hypothetical protein complement(1285598..1285762) Pseudomonas stutzeri A1501 5097262 YP_001171714.2 CDS rhlB NC_009434.1 1285905 1287335 R enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB complement(1285905..1287335) Pseudomonas stutzeri A1501 5097263 YP_001171715.1 CDS PST_1178 NC_009434.1 1287513 1288169 R Code: R; COG: COG0400; carboxylesterase complement(1287513..1288169) Pseudomonas stutzeri A1501 5097264 YP_001171716.1 CDS PST_1179 NC_009434.1 1288680 1289273 D hypothetical protein 1288680..1289273 Pseudomonas stutzeri A1501 5097265 YP_001171717.1 CDS purL NC_009434.1 1289386 1293282 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 1289386..1293282 Pseudomonas stutzeri A1501 5097266 YP_001171718.1 CDS PST_1181 NC_009434.1 1293387 1293713 R hypothetical protein complement(1293387..1293713) Pseudomonas stutzeri A1501 5097267 YP_001171719.1 CDS PST_1182 NC_009434.1 1293838 1294341 R Code: S; COG: COG3034; hypothetical protein complement(1293838..1294341) Pseudomonas stutzeri A1501 5097268 YP_001171720.1 CDS PST_1183 NC_009434.1 1294388 1294954 R Code: F; COG: COG1051; MutT/nudix family protein complement(1294388..1294954) Pseudomonas stutzeri A1501 5097269 YP_001171721.1 CDS PST_1184 NC_009434.1 1295140 1295757 D Code: LR; COG: COG0494; MutT/nudix family protein 1295140..1295757 Pseudomonas stutzeri A1501 5097270 YP_001171722.1 CDS PST_1185 NC_009434.1 1295870 1296340 D Code: R; COG: COG0663; anhydrase family 3 protein 1295870..1296340 Pseudomonas stutzeri A1501 5097271 YP_001171723.1 CDS PST_1186 NC_009434.1 1296337 1296528 D Code: R; COG: COG3313; Fe-S protein 1296337..1296528 Pseudomonas stutzeri A1501 5097272 YP_001171724.1 CDS purT NC_009434.1 1296576 1297757 D non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1296576..1297757 Pseudomonas stutzeri A1501 5097273 YP_001171725.1 CDS PST_1188 NC_009434.1 1297786 1299072 R Code: P; COG: COG4536; putative Mg2+ and Co2+ transporter CorB complement(1297786..1299072) Pseudomonas stutzeri A1501 5097274 YP_001171726.1 CDS PST_1189 NC_009434.1 1299090 1300037 R Code: R; COG: COG4137; hypothetical protein complement(1299090..1300037) Pseudomonas stutzeri A1501 5097275 YP_001171727.1 CDS ffh NC_009434.1 1300066 1301514 D Code: U; COG: COG0541; signal recognition particle protein Ffh 1300066..1301514 Pseudomonas stutzeri A1501 5097276 YP_001171728.1 CDS rpsP NC_009434.1 1301709 1301960 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1301709..1301960 Pseudomonas stutzeri A1501 5097277 YP_001171729.1 CDS rimM NC_009434.1 1301966 1302502 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1301966..1302502 Pseudomonas stutzeri A1501 5097278 YP_001171730.1 CDS trmD NC_009434.1 1302508 1303260 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1302508..1303260 Pseudomonas stutzeri A1501 5097279 YP_001171731.1 CDS rplS NC_009434.1 1303306 1303656 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1303306..1303656 Pseudomonas stutzeri A1501 5097280 YP_001171732.1 CDS xerD NC_009434.1 1303838 1304734 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1303838..1304734 Pseudomonas stutzeri A1501 5097281 YP_001171733.1 CDS dsbC NC_009434.1 1304881 1305609 D Code: O; COG: COG1651; thiol:disulfide interchange protein DsbC 1304881..1305609 Pseudomonas stutzeri A1501 5097282 YP_001171734.1 CDS PST_1197 NC_009434.1 1305714 1306202 D Code: S; COG: COG3791; hypothetical protein 1305714..1306202 Pseudomonas stutzeri A1501 5097283 YP_001171735.1 CDS hom NC_009434.1 1306314 1307609 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1306314..1307609 Pseudomonas stutzeri A1501 5097284 YP_001171736.1 CDS thrC NC_009434.1 1307681 1309090 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1307681..1309090 Pseudomonas stutzeri A1501 5097285 YP_001171737.1 CDS rnt NC_009434.1 1309191 1309802 R Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T complement(1309191..1309802) Pseudomonas stutzeri A1501 5097286 YP_001171738.1 CDS pyrC NC_009434.1 1309862 1310905 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(1309862..1310905) Pseudomonas stutzeri A1501 5097287 YP_001171739.1 CDS PST_1202 NC_009434.1 1310931 1311962 D Code: M; COG: COG2885; outer membrane protein 1310931..1311962 Pseudomonas stutzeri A1501 5097288 YP_001171740.1 CDS argG NC_009434.1 1312047 1313264 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1312047..1313264 Pseudomonas stutzeri A1501 5097289 YP_001171741.1 CDS gloA1 NC_009434.1 1313360 1313752 D Code: E; COG: COG0346; lactoylglutathione lyase 1313360..1313752 Pseudomonas stutzeri A1501 5097290 YP_001171742.1 CDS PST_1205 NC_009434.1 1313793 1313972 R hypothetical protein complement(1313793..1313972) Pseudomonas stutzeri A1501 5097291 YP_001171743.1 CDS nth NC_009434.1 1314081 1314719 R Code: L; COG: COG0177; endonuclease III complement(1314081..1314719) Pseudomonas stutzeri A1501 5097292 YP_001171744.1 CDS PST_1207 NC_009434.1 1314730 1315443 R in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE complement(1314730..1315443) Pseudomonas stutzeri A1501 5097293 YP_001171745.1 CDS PST_1208 NC_009434.1 1315440 1316213 R Code: C; COG: COG4659; RnfABCDGE type electron transport complex subunit G complement(1315440..1316213) Pseudomonas stutzeri A1501 5097294 YP_001171746.1 CDS PST_1209 NC_009434.1 1316215 1317243 R Code: C; COG: COG4658; RnfABCDGE type electron transport complex subunit D complement(1316215..1317243) Pseudomonas stutzeri A1501 5097295 YP_001171747.1 CDS PST_1210 NC_009434.1 1317351 1319834 R part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC complement(1317351..1319834) Pseudomonas stutzeri A1501 5097296 YP_001171748.1 CDS PST_1211 NC_009434.1 1319831 1320406 R part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB complement(1319831..1320406) Pseudomonas stutzeri A1501 5097297 YP_001171749.1 CDS PST_1212 NC_009434.1 1320403 1320987 R Code: C; COG: COG4657; Na(+)-translocating NADH-quinone reductase subunit E complement(1320403..1320987) Pseudomonas stutzeri A1501 5097298 YP_001171750.1 CDS PST_1213 NC_009434.1 1321650 1322756 R Code: I; COG: COG1024; enoyl-CoA hydratase/isomerase complement(1321650..1322756) Pseudomonas stutzeri A1501 5097299 YP_001171751.1 CDS PST_1214 NC_009434.1 1322790 1323608 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1322790..1323608) Pseudomonas stutzeri A1501 5097300 YP_001171752.1 CDS PST_1215 NC_009434.1 1323765 1325009 R branched chain amino-acid ABC transporter substrate-binding protein complement(1323765..1325009) Pseudomonas stutzeri A1501 5097301 YP_001171753.1 CDS ung NC_009434.1 1325335 1325955 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1325335..1325955 Pseudomonas stutzeri A1501 5097302 YP_001171754.1 CDS PST_1217 NC_009434.1 1325992 1326507 R Code: S; COG: COG3652; outer membrane protein complement(1325992..1326507) Pseudomonas stutzeri A1501 5097303 YP_001171755.1 CDS PST_1218 NC_009434.1 1326650 1327486 R Code: T; COG: COG1639; signal transduction protein complement(1326650..1327486) Pseudomonas stutzeri A1501 5097304 YP_001171756.1 CDS PST_1219 NC_009434.1 1327594 1328379 R related to GcvT; Code: R; COG: COG0354; aminomethyltransferase complement(1327594..1328379) Pseudomonas stutzeri A1501 5097305 YP_001171757.1 CDS PST_1220 NC_009434.1 1328688 1328942 D Code: S; COG: COG2938; hypothetical protein 1328688..1328942 Pseudomonas stutzeri A1501 5097306 YP_001171758.1 CDS PST_1221 NC_009434.1 1328926 1329381 D hypothetical protein 1328926..1329381 Pseudomonas stutzeri A1501 5097307 YP_001171759.1 CDS nadB NC_009434.1 1329350 1331080 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(1329350..1331080) Pseudomonas stutzeri A1501 5097308 YP_001171760.1 CDS algU NC_009434.1 1331314 1331895 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor regulates genes involved in alginate biosynthesis; RNA polymerase sigma factor AlgU 1331314..1331895 Pseudomonas stutzeri A1501 5097309 YP_001171761.1 CDS mucA NC_009434.1 1331885 1332514 D Code: T; COG: COG3073; anti-sigma factor MucA 1331885..1332514 Pseudomonas stutzeri A1501 5097310 YP_001171762.1 CDS mucB NC_009434.1 1332523 1333467 D Code: T; COG: COG3026; negative regulator for alginate biosynthesis MucB 1332523..1333467 Pseudomonas stutzeri A1501 5097311 YP_001171763.1 CDS mucC NC_009434.1 1333464 1333916 D Code: T; COG: COG3086; positive regulator for alginate biosynthesis MucC 1333464..1333916 Pseudomonas stutzeri A1501 5097312 YP_001171764.1 CDS mucD NC_009434.1 1333952 1335373 D Code: O; COG: COG0265; serine protease MucD 1333952..1335373 Pseudomonas stutzeri A1501 5097313 YP_001171765.1 CDS lepA NC_009434.1 1335553 1337352 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1335553..1337352 Pseudomonas stutzeri A1501 5097314 YP_001171766.1 CDS lepB NC_009434.1 1337354 1338208 D Code: U; COG: COG0681; signal peptidase I 1337354..1338208 Pseudomonas stutzeri A1501 5097315 YP_001171767.1 CDS PST_1230 NC_009434.1 1338301 1338678 D hypothetical protein 1338301..1338678 Pseudomonas stutzeri A1501 5097316 YP_001171768.1 CDS rnc NC_009434.1 1338738 1339364 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1338738..1339364 Pseudomonas stutzeri A1501 5097317 YP_001171769.1 CDS era NC_009434.1 1339351 1340268 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1339351..1340268 Pseudomonas stutzeri A1501 5097318 YP_001171770.1 CDS recO NC_009434.1 1340296 1341006 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 1340296..1341006 Pseudomonas stutzeri A1501 5097319 YP_001171771.1 CDS pdxJ NC_009434.1 1340999 1341745 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1340999..1341745 Pseudomonas stutzeri A1501 5097320 YP_001171772.1 CDS PST_1235 NC_009434.1 1341802 1342008 R hypothetical protein complement(1341802..1342008) Pseudomonas stutzeri A1501 5097321 YP_001171773.1 CDS PST_1236 NC_009434.1 1341993 1342943 R Code: K; COG: COG0583; transcriptional regulator complement(1341993..1342943) Pseudomonas stutzeri A1501 5097322 YP_001171774.1 CDS PST_1237 NC_009434.1 1343374 1344369 R Code: QR; COG: COG0500; methyltransferase complement(1343374..1344369) Pseudomonas stutzeri A1501 5097323 YP_001171775.1 CDS PST_1238 NC_009434.1 1344333 1345163 R Code: QR; COG: COG0500; methyltransferase complement(1344333..1345163) Pseudomonas stutzeri A1501 5097324 YP_001171776.1 CDS PST_1239 NC_009434.1 1345142 1345555 R Code: S; COG: COG5513; putative lipoprotein complement(1345142..1345555) Pseudomonas stutzeri A1501 5097325 YP_001171777.1 CDS lon-1 NC_009434.1 1345675 1348050 R Code: O; COG: COG0466; ATP-dependent protease La complement(1345675..1348050) Pseudomonas stutzeri A1501 5097326 YP_001171778.1 CDS PST_1241 NC_009434.1 1348339 1348962 D Code: K; COG: COG2207; transcriptional regulator 1348339..1348962 Pseudomonas stutzeri A1501 5097327 YP_001171779.1 CDS putA NC_009434.1 1349226 1352387 D proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1349226..1352387 Pseudomonas stutzeri A1501 5097328 YP_001171780.1 CDS putP-1 NC_009434.1 1352811 1354130 D Code: ER; COG: COG0591; sodium/proline symporter PutP 1352811..1354130 Pseudomonas stutzeri A1501 5097329 YP_001171781.1 CDS PST_1244 NC_009434.1 1354275 1354499 R hypothetical protein complement(1354275..1354499) Pseudomonas stutzeri A1501 5097330 YP_001171782.1 CDS PST_1245 NC_009434.1 1354724 1356742 D Code: P; COG: COG1629; TonB-dependent receptor protein 1354724..1356742 Pseudomonas stutzeri A1501 5097331 YP_001171783.1 CDS putP-2 NC_009434.1 1356754 1358421 D Code: ER; COG: COG0591; sodium/proline symporter PutP 1356754..1358421 Pseudomonas stutzeri A1501 5097332 YP_001171784.1 CDS PST_1247 NC_009434.1 1358586 1359401 R hypothetical protein complement(1358586..1359401) Pseudomonas stutzeri A1501 5097333 YP_001171785.1 CDS pcaQ NC_009434.1 1359538 1360452 D Code: K; COG: COG0583; pca operon transcriptional activator PcaQ 1359538..1360452 Pseudomonas stutzeri A1501 5097334 YP_001171786.1 CDS pcaH NC_009434.1 1360563 1361282 D Code: Q; COG: COG3485; protocatechuate 3,4-dioxygenase subunit beta 1360563..1361282 Pseudomonas stutzeri A1501 5097335 YP_001171787.1 CDS pcaG NC_009434.1 1361295 1361900 D Code: Q; COG: COG3485; protocatechuate 3,4-dioxygenase subunit alpha 1361295..1361900 Pseudomonas stutzeri A1501 5097336 YP_001171788.1 CDS PST_1251 NC_009434.1 1361890 1362984 D Code: R; COG: COG1485; ATPase 1361890..1362984 Pseudomonas stutzeri A1501 5097337 YP_001171789.1 CDS PST_1252 NC_009434.1 1363097 1363924 D permease 1363097..1363924 Pseudomonas stutzeri A1501 5097338 YP_001171790.1 CDS pcaR NC_009434.1 1363993 1364835 D Code: K; COG: COG1414; transcriptional regulator PcaR 1363993..1364835 Pseudomonas stutzeri A1501 5097339 YP_001171791.1 CDS pcaI NC_009434.1 1364937 1365884 D Code: I; COG: COG1788; 3-oxoadipate:succinyl-CoA transferase subunit A 1364937..1365884 Pseudomonas stutzeri A1501 5097340 YP_001171792.1 CDS pcaJ NC_009434.1 1365884 1366666 D Code: I; COG: COG2057; 3-oxoadipate:succinyl-CoA transferase subunit B 1365884..1366666 Pseudomonas stutzeri A1501 5097341 YP_001171793.1 CDS pcaF NC_009434.1 1366663 1367868 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 1366663..1367868 Pseudomonas stutzeri A1501 5097342 YP_001171794.1 CDS pcaB NC_009434.1 1368091 1369452 D Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase 1368091..1369452 Pseudomonas stutzeri A1501 5097343 YP_001171795.1 CDS pcaD NC_009434.1 1369461 1370249 D Code: R; COG: COG0596; beta-ketoadipate enol-lactone hydrolase 1369461..1370249 Pseudomonas stutzeri A1501 5097344 YP_001171796.1 CDS pcaC NC_009434.1 1370345 1370743 D Code: S; COG: COG0599; 4-carboxymuconolactone decarboxylase 1370345..1370743 Pseudomonas stutzeri A1501 5097345 YP_001171797.1 CDS PST_1261 NC_009434.1 1371116 1371808 R Code: J; COG: COG1187; pseudouridylate synthase complement(1371116..1371808) Pseudomonas stutzeri A1501 5097347 YP_001171798.1 CDS metG NC_009434.1 1372072 1374150 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1372072..1374150) Pseudomonas stutzeri A1501 5097348 YP_001171799.1 CDS PST_1263 NC_009434.1 1374282 1375376 D Code: D; COG: COG0489; ATP-binding Mrp/Nbp35 family protein 1374282..1375376 Pseudomonas stutzeri A1501 5097349 YP_001171800.1 CDS PST_1264 NC_009434.1 1375480 1375689 R Code: K; COG: COG1278; cold shock protein CapB complement(1375480..1375689) Pseudomonas stutzeri A1501 5097350 YP_001171801.1 CDS dcd NC_009434.1 1376068 1376583 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1376068..1376583 Pseudomonas stutzeri A1501 5097351 YP_001171802.1 CDS napC NC_009434.1 1376644 1377240 R Code: C; COG: COG3005; periplasmic nitrate reductase c subunit complement(1376644..1377240) Pseudomonas stutzeri A1501 5097352 YP_001171803.1 CDS napB NC_009434.1 1377251 1377739 R Code: C; COG: COG3043; periplasmic nitrate reductase b subunit complement(1377251..1377739) Pseudomonas stutzeri A1501 5097353 YP_001171804.1 CDS napA NC_009434.1 1377751 1380255 R periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit complement(1377751..1380255) Pseudomonas stutzeri A1501 5097354 YP_001171805.1 CDS napD NC_009434.1 1380255 1380557 R Code: P; COG: COG3062; hypothetical protein complement(1380255..1380557) Pseudomonas stutzeri A1501 5097355 YP_001171806.1 CDS napE NC_009434.1 1380569 1380748 R Code: C; COG: COG4459; periplasmic nitrate reductase NapE subunit complement(1380569..1380748) Pseudomonas stutzeri A1501 5097356 YP_001171807.1 CDS PST_1271 NC_009434.1 1380932 1382107 D Code: GEPR; COG: COG0477; MFS family transporter 1380932..1382107 Pseudomonas stutzeri A1501 5097357 YP_001171808.1 CDS PST_1272 NC_009434.1 1382123 1382617 R Code: S; COG: COG3091; hypothetical protein complement(1382123..1382617) Pseudomonas stutzeri A1501 5097358 YP_001171809.1 CDS PST_1273 NC_009434.1 1382681 1383382 R hypothetical protein complement(1382681..1383382) Pseudomonas stutzeri A1501 5097359 YP_001171810.1 CDS PST_1274 NC_009434.1 1383545 1384144 R hypothetical protein complement(1383545..1384144) Pseudomonas stutzeri A1501 5097360 YP_001171811.1 CDS PST_1275 NC_009434.1 1384284 1384877 R Code: O; COG: COG2214; DnaJ-class molecular chaperone complement(1384284..1384877) Pseudomonas stutzeri A1501 5097361 YP_001171812.1 CDS PST_1276 NC_009434.1 1385011 1385835 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 1385011..1385835 Pseudomonas stutzeri A1501 5097362 YP_001171813.1 CDS aroF-2 NC_009434.1 1386391 1387467 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1386391..1387467 Pseudomonas stutzeri A1501 5097363 YP_001171814.1 CDS PST_1278 NC_009434.1 1387576 1388280 D Code: L; COG: COG2818; 3-methyladenine DNA glycosylase 1387576..1388280 Pseudomonas stutzeri A1501 5097364 YP_001171815.1 CDS PST_1279 NC_009434.1 1388339 1388704 D hypothetical protein 1388339..1388704 Pseudomonas stutzeri A1501 5097365 YP_001171816.1 CDS PST_1280 NC_009434.1 1388810 1389361 D hypothetical protein 1388810..1389361 Pseudomonas stutzeri A1501 5097366 YP_001171817.1 CDS cydA1 NC_009434.1 1389881 1391512 D Code: C; COG: COG1271; cytochrome d ubiquinol oxidase, subunit I 1389881..1391512 Pseudomonas stutzeri A1501 5097367 YP_001171818.1 CDS cydB1 NC_009434.1 1391457 1392665 D Code: C; COG: COG1294; cytochrome d terminal oxidase polypeptide subunit II 1391457..1392665 Pseudomonas stutzeri A1501 5097368 YP_001171819.1 CDS PST_1283 NC_009434.1 1392674 1393975 D hypothetical protein 1392674..1393975 Pseudomonas stutzeri A1501 5097369 YP_001171820.1 CDS PST_1284 NC_009434.1 1392709 1392813 D Code: S; COG: COG4890; hypothetical protein 1392709..1392813 Pseudomonas stutzeri A1501 5097370 YP_001171821.1 CDS PST_1285 NC_009434.1 1394043 1394675 D Code: M; COG: COG0791; putative lipoprotein 1394043..1394675 Pseudomonas stutzeri A1501 5097371 YP_001171822.1 CDS PST_1286 NC_009434.1 1394752 1395276 D Code: M; COG: COG0791; putative lipoprotein 1394752..1395276 Pseudomonas stutzeri A1501 5097372 YP_001171823.1 CDS PST_1287 NC_009434.1 1395464 1396717 D Na+/H+ antiporter NhaD 1395464..1396717 Pseudomonas stutzeri A1501 5097373 YP_001171824.1 CDS PST_1288 NC_009434.1 1396740 1397861 R Code: R; COG: COG1409; DNA repair exonuclease complement(1396740..1397861) Pseudomonas stutzeri A1501 5097374 YP_001171825.1 CDS PST_1289 NC_009434.1 1398063 1399880 D Code: H; COG: COG4206; TonB-dependent receptor 1398063..1399880 Pseudomonas stutzeri A1501 5097375 YP_001171826.1 CDS PST_1290 NC_009434.1 1399927 1400496 D hypothetical protein 1399927..1400496 Pseudomonas stutzeri A1501 5097376 YP_001171827.1 CDS cobO NC_009434.1 1400493 1401104 D catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 1400493..1401104 Pseudomonas stutzeri A1501 5097377 YP_001171828.1 CDS cobB NC_009434.1 1401237 1402529 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1401237..1402529 Pseudomonas stutzeri A1501 5097378 YP_001171829.1 CDS PST_1293 NC_009434.1 1402595 1403173 D Code: C; COG: COG0778; nitroreductase family protein 1402595..1403173 Pseudomonas stutzeri A1501 5097379 YP_001171830.1 CDS PST_1294 NC_009434.1 1403170 1403970 D substrate-binding protein 1403170..1403970 Pseudomonas stutzeri A1501 5097380 YP_001171831.1 CDS cobD NC_009434.1 1403967 1404878 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1403967..1404878 Pseudomonas stutzeri A1501 5097381 YP_001171832.1 CDS cobC NC_009434.1 1404871 1405860 D cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 1404871..1405860 Pseudomonas stutzeri A1501 5097382 YP_001171833.1 CDS cobQ NC_009434.1 1405857 1407314 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1405857..1407314 Pseudomonas stutzeri A1501 5097383 YP_001171834.1 CDS cobU NC_009434.1 1407317 1407835 D catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1407317..1407835 Pseudomonas stutzeri A1501 5097384 YP_001171835.1 CDS cobT NC_009434.1 1407835 1408884 D catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1407835..1408884 Pseudomonas stutzeri A1501 5097385 YP_001171836.1 CDS PST_1300 NC_009434.1 1408821 1409459 D Code: G; COG: COG0406; alpha-ribazole-5'-phosphate phosphatase 1408821..1409459 Pseudomonas stutzeri A1501 5097386 YP_001171837.1 CDS cobS NC_009434.1 1409469 1410206 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 1409469..1410206 Pseudomonas stutzeri A1501 5097387 YP_001171838.1 CDS PST_1302 NC_009434.1 1410286 1410618 R Code: O; COG: COG0278; glutaredoxin-like protein complement(1410286..1410618) Pseudomonas stutzeri A1501 5097388 YP_001171839.1 CDS PST_1303 NC_009434.1 1410623 1410982 R Code: P; COG: COG0607; thiosulfate sulfurtransferase glpE complement(1410623..1410982) Pseudomonas stutzeri A1501 5097389 YP_001171840.1 CDS nifQ NC_009434.1 1410979 1411536 R nitrogen fixation protein NifQ complement(1410979..1411536) Pseudomonas stutzeri A1501 5097390 YP_001171841.1 CDS PST_1305 NC_009434.1 1411533 1411979 R arsenate reductase complement(1411533..1411979) Pseudomonas stutzeri A1501 5097391 YP_001171842.1 CDS fdxN NC_009434.1 1411990 1412268 R ferredoxin-like protein complement(1411990..1412268) Pseudomonas stutzeri A1501 5097392 YP_001171843.1 CDS nifB NC_009434.1 1412280 1413623 R Code: R; COG: COG0535; FeMo cofactor biosynthesis protein NifB complement(1412280..1413623) Pseudomonas stutzeri A1501 5097393 YP_001171844.1 CDS PST_1307 NC_009434.1 1414655 1415134 D Code: S; COG: COG3865; hypothetical protein 1414655..1415134 Pseudomonas stutzeri A1501 5097394 YP_001171845.1 CDS PST_1308 NC_009434.1 1415164 1416087 R Code: K; COG: COG0583; LysR family transcriptional regulator complement(1415164..1416087) Pseudomonas stutzeri A1501 5097395 YP_001171846.1 CDS PST_1309 NC_009434.1 1416110 1416631 D Code: J; COG: COG0251; hypothetical protein 1416110..1416631 Pseudomonas stutzeri A1501 5097396 YP_001171847.1 CDS PST_1310 NC_009434.1 1416738 1417565 R Code: K; COG: COG2207; AraC protein complement(1416738..1417565) Pseudomonas stutzeri A1501 5097397 YP_001171848.1 CDS fsr NC_009434.1 1417703 1418914 D Code: GEPR; COG: COG0477; fosmidomycin resistance protein 1417703..1418914 Pseudomonas stutzeri A1501 5097398 YP_001171849.1 CDS tpmA NC_009434.1 1419048 1419755 R catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; thiopurine S-methyltransferase complement(1419048..1419755) Pseudomonas stutzeri A1501 5097399 YP_001171850.1 CDS nifA NC_009434.1 1419856 1421421 R Code: KT; COG: COG3604; nitrogen fixation positive regulatory protein complement(1419856..1421421) Pseudomonas stutzeri A1501 5097400 YP_001171851.1 CDS nifL NC_009434.1 1421436 1423049 R nitrogen fixation negative regulatory protein complement(1421436..1423049) Pseudomonas stutzeri A1501 5097401 YP_001171852.1 CDS rnfA NC_009434.1 1423460 1424032 D Code: C; COG: COG4657; RnfABCDGE type electron transport complex subunit A 1423460..1424032 Pseudomonas stutzeri A1501 5097402 YP_001171853.1 CDS rnfB NC_009434.1 1424070 1424594 D Code: C; COG: COG2878; RnfABCDGE type electron transport complex subunit B 1424070..1424594 Pseudomonas stutzeri A1501 5097403 YP_001171854.1 CDS rnfC NC_009434.1 1424637 1426100 D Code: C; COG: COG4656; RnfABCDGE type electron transport complex subunit C 1424637..1426100 Pseudomonas stutzeri A1501 5097404 YP_001171855.1 CDS rnfD NC_009434.1 1426097 1427197 D Code: C; COG: COG4658; RnfABCDGE type electron transport complex subunit D 1426097..1427197 Pseudomonas stutzeri A1501 5097405 YP_001171856.1 CDS rnfG NC_009434.1 1427194 1427880 D Code: C; COG: COG4659; RnfABCDGE type electron transport complex subunit G 1427194..1427880 Pseudomonas stutzeri A1501 5097406 YP_001171857.1 CDS rnfE NC_009434.1 1427877 1428596 D Code: C; COG: COG4660; RnfABCDGE type electron transport complex subunit E 1427877..1428596 Pseudomonas stutzeri A1501 5097407 YP_001171858.1 CDS rnfH NC_009434.1 1428622 1428882 D Code: S; COG: COG2914; RnfABCDGE type electron transport complex subunit H 1428622..1428882 Pseudomonas stutzeri A1501 5097408 YP_001171859.1 CDS nifY2 NC_009434.1 1428923 1429654 D dinitrogenase iron-molybdenum cofactor biosynthesis 1428923..1429654 Pseudomonas stutzeri A1501 5097409 YP_001171860.1 CDS PST_1323 NC_009434.1 1429651 1430049 D nitrogen fixation-like protein 1429651..1430049 Pseudomonas stutzeri A1501 5097410 YP_001171861.1 CDS PST_1324 NC_009434.1 1430405 1430968 R hypothetical protein complement(1430405..1430968) Pseudomonas stutzeri A1501 5097411 YP_001171862.1 CDS PST_1325 NC_009434.1 1430996 1431847 R hypothetical protein complement(1430996..1431847) Pseudomonas stutzeri A1501 5097412 YP_001171863.1 CDS nifH NC_009434.1 1432264 1433145 D Code: P; COG: COG1348; Fe protein, nitrogenase reductase NifH 1432264..1433145 Pseudomonas stutzeri A1501 5097413 YP_001171864.1 CDS nifD NC_009434.1 1433257 1434738 D Code: C; COG: COG2710; MoFe protein subunit alpha 1433257..1434738 Pseudomonas stutzeri A1501 5097414 YP_001171865.1 CDS nifK NC_009434.1 1434841 1436412 D Code: C; COG: COG2710; MoFe protein subunit beta 1434841..1436412 Pseudomonas stutzeri A1501 5097415 YP_001171866.1 CDS nifT NC_009434.1 1436504 1436725 D Code: Q; COG: COG5554; nitrogen fixation protein 1436504..1436725 Pseudomonas stutzeri A1501 5097416 YP_001171867.1 CDS nifY NC_009434.1 1436729 1437463 D nitrogenase iron-molybdenum cofactor biosynthesis 1436729..1437463 Pseudomonas stutzeri A1501 5097417 YP_001171868.1 CDS PST_1331 NC_009434.1 1437460 1437729 D hypothetical protein 1437460..1437729 Pseudomonas stutzeri A1501 5097418 YP_001171869.1 CDS PST_1332 NC_009434.1 1437985 1438470 D hypothetical protein 1437985..1438470 Pseudomonas stutzeri A1501 5097419 YP_001171870.1 CDS nifE NC_009434.1 1438882 1440300 D Code: C; COG: COG2710; nitrogenase iron-molybdenum cofactor biosynthesis protein 1438882..1440300 Pseudomonas stutzeri A1501 5097420 YP_001171871.1 CDS nifN NC_009434.1 1440311 1441687 D functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 1440311..1441687 Pseudomonas stutzeri A1501 5097421 YP_001171872.1 CDS nifX NC_009434.1 1441691 1442170 D nitrogenase iron-molybdenum cofactor biosynthesis protein 1441691..1442170 Pseudomonas stutzeri A1501 5097422 YP_001171873.1 CDS PST_1336 NC_009434.1 1442199 1442678 D hypothetical protein 1442199..1442678 Pseudomonas stutzeri A1501 5097423 YP_001171874.1 CDS PST_1337 NC_009434.1 1442693 1442902 D hypothetical protein 1442693..1442902 Pseudomonas stutzeri A1501 5097424 YP_001171875.1 CDS PST_1338 NC_009434.1 1442985 1443281 D Code: C; COG: COG1145; ferredoxin, 4Fe-4S 1442985..1443281 Pseudomonas stutzeri A1501 5097425 YP_001171876.1 CDS PST_1339 NC_009434.1 1443294 1443614 D Code: C; COG: COG3411; ferredoxin, 2Fe-2S 1443294..1443614 Pseudomonas stutzeri A1501 5097426 YP_001171877.1 CDS PST_1340 NC_009434.1 1443618 1444115 D hypothetical protein 1443618..1444115 Pseudomonas stutzeri A1501 5097427 YP_001171878.1 CDS PST_1341 NC_009434.1 1444115 1444489 D hypothetical protein 1444115..1444489 Pseudomonas stutzeri A1501 5097428 YP_001171879.1 CDS PST_1342 NC_009434.1 1444482 1445231 D hypothetical protein 1444482..1445231 Pseudomonas stutzeri A1501 5097429 YP_001171880.1 CDS PST_1343 NC_009434.1 1445228 1445650 D hypothetical protein 1445228..1445650 Pseudomonas stutzeri A1501 5097430 YP_001171881.1 CDS PST_1344 NC_009434.1 1446147 1446419 R hypothetical protein complement(1446147..1446419) Pseudomonas stutzeri A1501 5097431 YP_001171882.1 CDS modC NC_009434.1 1446528 1447625 R Code: P; COG: COG4148; molybdenum transport protein ModC complement(1446528..1447625) Pseudomonas stutzeri A1501 5097432 YP_001171883.1 CDS modB NC_009434.1 1447638 1448318 R Code: P; COG: COG4149; molybdate ABC transporter permease complement(1447638..1448318) Pseudomonas stutzeri A1501 5097433 YP_001171884.1 CDS modA NC_009434.1 1448325 1449077 R Code: P; COG: COG0725; molybdenum ABC transporter periplasmic binding protein complement(1448325..1449077) Pseudomonas stutzeri A1501 5097434 YP_001171885.1 CDS PST_1348 NC_009434.1 1449089 1449895 R Code: R; COG: COG2005; putative molybdenum-binding protein complement(1449089..1449895) Pseudomonas stutzeri A1501 5097435 YP_001171886.1 CDS hesB NC_009434.1 1450286 1450609 D Code: S; COG: COG0316; Fe-S cluster assembly protein 1450286..1450609 Pseudomonas stutzeri A1501 5097436 YP_001171887.1 CDS nifU NC_009434.1 1450671 1451621 D Fe-S cluster assembly protein NifU 1450671..1451621 Pseudomonas stutzeri A1501 5097437 YP_001171888.1 CDS nifS NC_009434.1 1451623 1452831 D Code: E; COG: COG1104; nitrogenase metalloclusters biosynthesis protein NifS 1451623..1452831 Pseudomonas stutzeri A1501 5097438 YP_001171889.1 CDS nifV NC_009434.1 1452872 1454017 D Code: E; COG: COG0119; NifV protein, encodes a homocitrate synthase 1452872..1454017 Pseudomonas stutzeri A1501 5097439 YP_001171890.1 CDS cysE NC_009434.1 1454014 1454757 D Code: E; COG: COG1045; serine acetyltransferase (cysE-like) 1454014..1454757 Pseudomonas stutzeri A1501 5097440 YP_001171891.1 CDS PST_1354 NC_009434.1 1454770 1455309 D hypothetical protein 1454770..1455309 Pseudomonas stutzeri A1501 5097441 YP_001171892.1 CDS nifW NC_009434.1 1455306 1455653 D nitrogenase stabilizing/protective protein nifW 1455306..1455653 Pseudomonas stutzeri A1501 5097442 YP_001171893.1 CDS nifZ NC_009434.1 1455673 1456143 D Fe-S cofactor synthesis protein 1455673..1456143 Pseudomonas stutzeri A1501 5097443 YP_001171894.1 CDS nifM NC_009434.1 1456133 1457011 D NifM protein a peptidyl-prolyl cis/trans isomerase 1456133..1457011 Pseudomonas stutzeri A1501 5097444 YP_001171895.1 CDS clpX NC_009434.1 1457008 1458324 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1457008..1458324 Pseudomonas stutzeri A1501 5097445 YP_001171896.1 CDS nifF NC_009434.1 1458524 1459066 D Code: C; COG: COG0716; flavodoxin required for electron transfer to the Fe protein 1458524..1459066 Pseudomonas stutzeri A1501 5097446 YP_001171897.1 CDS PST_1360 NC_009434.1 1459253 1459801 D Code: O; COG: COG0386; glutathione peroxidase 1459253..1459801 Pseudomonas stutzeri A1501 5097447 YP_001171898.1 CDS PST_1361 NC_009434.1 1459848 1461149 R Code: I; COG: COG2067; long-chain fatty acid transporter complement(1459848..1461149) Pseudomonas stutzeri A1501 5097448 YP_001171899.1 CDS PST_1362 NC_009434.1 1461346 1462191 R Code: P; COG: COG2897; 3-mercaptopyruvate sulfurtransferase complement(1461346..1462191) Pseudomonas stutzeri A1501 5097449 YP_001171900.1 CDS rnd NC_009434.1 1462247 1463452 D Code: J; COG: COG0349; ribonuclease D 1462247..1463452 Pseudomonas stutzeri A1501 5097450 YP_001171901.1 CDS PST_1364 NC_009434.1 1463449 1463742 D Code: S; COG: COG3100; hypothetical protein 1463449..1463742 Pseudomonas stutzeri A1501 5097451 YP_001171902.1 CDS PST_1365 NC_009434.1 1463833 1464240 D hypothetical protein 1463833..1464240 Pseudomonas stutzeri A1501 5097452 YP_001171903.1 CDS PST_1366 NC_009434.1 1464337 1464816 D Code: S; COG: COG2983; hypothetical protein 1464337..1464816 Pseudomonas stutzeri A1501 5097453 YP_001171904.1 CDS PST_1367 NC_009434.1 1464889 1466109 D hypothetical protein 1464889..1466109 Pseudomonas stutzeri A1501 5097454 YP_001171905.1 CDS PST_1368 NC_009434.1 1466152 1467168 D Code: E; COG: COG2008; threonine aldolase 1466152..1467168 Pseudomonas stutzeri A1501 5097455 YP_001171906.1 CDS alaS NC_009434.1 1467261 1469963 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1467261..1469963 Pseudomonas stutzeri A1501 5097456 YP_001171907.1 CDS lysC NC_009434.1 1470043 1471281 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1470043..1471281 Pseudomonas stutzeri A1501 5097457 YP_001171908.1 CDS csrA NC_009434.1 1471462 1471647 D affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 1471462..1471647 Pseudomonas stutzeri A1501 5097458 YP_001171909.1 CDS PST_1375 NC_009434.1 1472183 1472665 R hypothetical protein complement(1472183..1472665) Pseudomonas stutzeri A1501 5097462 YP_001171910.1 CDS mgtE NC_009434.1 1472995 1474437 D Code: P; COG: COG2239; magnesium transporter 1472995..1474437 Pseudomonas stutzeri A1501 5097463 YP_001171911.1 CDS PST_1377 NC_009434.1 1474843 1476627 D catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase 1474843..1476627 Pseudomonas stutzeri A1501 5097464 YP_001171912.1 CDS PST_1378 NC_009434.1 1476638 1477774 D Code: C; COG: COG1883; oxaloacetate decarboxylase subunit beta 1476638..1477774 Pseudomonas stutzeri A1501 5097465 YP_001171913.1 CDS algZ NC_009434.1 1477832 1478272 R alginate biosynthesis transcriptional activator complement(1477832..1478272) Pseudomonas stutzeri A1501 5097466 YP_001171914.1 CDS PST_1380 NC_009434.1 1478424 1478888 R hypothetical protein complement(1478424..1478888) Pseudomonas stutzeri A1501 5097467 YP_001171915.1 CDS PST_1382 NC_009434.1 1479408 1480154 R Code: M; COG: COG5581; glycosyltransferase complement(1479408..1480154) Pseudomonas stutzeri A1501 5097469 YP_001171916.1 CDS PST_1383 NC_009434.1 1480214 1480324 R hypothetical protein complement(1480214..1480324) Pseudomonas stutzeri A1501 5097470 YP_001171917.1 CDS flgM NC_009434.1 1480727 1481056 R Code: KNU; COG: COG2747; negative regulator of flagellin synthesis FlgM complement(1480727..1481056) Pseudomonas stutzeri A1501 5097471 YP_001171918.1 CDS flgA NC_009434.1 1481173 1481925 R required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA complement(1481173..1481925) Pseudomonas stutzeri A1501 5097472 YP_001171919.1 CDS cheV-3 NC_009434.1 1482003 1482935 D chemotaxis protein CheV 1482003..1482935 Pseudomonas stutzeri A1501 5097473 YP_001171920.1 CDS cheR NC_009434.1 1483062 1483799 D Code: NT; COG: COG1352; chemotaxis protein methyltransferase CheR 1483062..1483799 Pseudomonas stutzeri A1501 5097474 YP_001171921.1 CDS flgB NC_009434.1 1483988 1484392 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 1483988..1484392 Pseudomonas stutzeri A1501 5097475 YP_001171922.1 CDS flgC NC_009434.1 1484448 1484852 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1484448..1484852 Pseudomonas stutzeri A1501 5097476 YP_001171923.1 CDS flgD NC_009434.1 1484865 1485545 D Code: N; COG: COG1843; basal-body rod modification protein FlgD 1484865..1485545 Pseudomonas stutzeri A1501 5097477 YP_001171924.1 CDS flgE NC_009434.1 1485568 1486884 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1485568..1486884 Pseudomonas stutzeri A1501 5097478 YP_001171925.1 CDS flgF NC_009434.1 1487211 1487822 D Code: N; COG: COG4787; flagellar basal-body rod protein FlgF 1487211..1487822 Pseudomonas stutzeri A1501 5097479 YP_001171926.1 CDS flgG NC_009434.1 1487865 1488650 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1487865..1488650 Pseudomonas stutzeri A1501 5097480 YP_001171927.1 CDS flgH NC_009434.1 1488722 1489417 D part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 1488722..1489417 Pseudomonas stutzeri A1501 5097481 YP_001171928.1 CDS flgI NC_009434.1 1489432 1490532 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1489432..1490532 Pseudomonas stutzeri A1501 5097482 YP_001171929.1 CDS flgJ NC_009434.1 1490547 1491707 D Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 1490547..1491707 Pseudomonas stutzeri A1501 5097483 YP_001171930.1 CDS flgK NC_009434.1 1491711 1493720 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 1491711..1493720 Pseudomonas stutzeri A1501 5097484 YP_001171931.1 CDS flgL NC_009434.1 1493732 1495312 D With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 1493732..1495312 Pseudomonas stutzeri A1501 5097485 YP_001171932.1 CDS PST_1399 NC_009434.1 1495502 1495621 D hypothetical protein 1495502..1495621 Pseudomonas stutzeri A1501 5097486 YP_001171933.1 CDS cysC NC_009434.1 1496088 1496690 D Code: P; COG: COG0529; adenylylsulfate kinase 1496088..1496690 Pseudomonas stutzeri A1501 5097487 YP_001171934.1 CDS PST_1401 NC_009434.1 1496774 1497454 D hypothetical protein 1496774..1497454 Pseudomonas stutzeri A1501 5097488 YP_001171935.1 CDS PST_1402 NC_009434.1 1497509 1502356 D hypothetical protein 1497509..1502356 Pseudomonas stutzeri A1501 5097489 YP_001171936.1 CDS PST_1403 NC_009434.1 1502353 1502556 D hypothetical protein 1502353..1502556 Pseudomonas stutzeri A1501 5097490 YP_001171937.1 CDS fliC NC_009434.1 1502782 1504230 D Code: N; COG: COG1344; flagellin type B 1502782..1504230 Pseudomonas stutzeri A1501 5097491 YP_001171938.1 CDS PST_1405 NC_009434.1 1504297 1504662 D Code: N; COG: COG1334; flagellin FlaG 1504297..1504662 Pseudomonas stutzeri A1501 5097492 YP_001171939.1 CDS PST_1406 NC_009434.1 1504790 1506196 D Code: N; COG: COG1345; flagellar cap protein FliD 1504790..1506196 Pseudomonas stutzeri A1501 5097493 YP_001171940.1 CDS PST_1407 NC_009434.1 1506325 1506642 D Code: L; COG: COG1555; hypothetical protein 1506325..1506642 Pseudomonas stutzeri A1501 5097494 YP_001171941.1 CDS PST_1408 NC_009434.1 1507040 1507489 D Code: S; COG: COG3339; hypothetical protein 1507040..1507489 Pseudomonas stutzeri A1501 5097495 YP_001171942.1 CDS PST_1409 NC_009434.1 1507648 1507974 D Code: K; COG: COG1396; Cro/CI family transcriptional regulator 1507648..1507974 Pseudomonas stutzeri A1501 5097496 YP_001171943.1 CDS PST_1410 NC_009434.1 1507992 1508351 D hypothetical protein 1507992..1508351 Pseudomonas stutzeri A1501 5097497 YP_001171944.1 CDS PST_1411 NC_009434.1 1508402 1508806 D hypothetical protein 1508402..1508806 Pseudomonas stutzeri A1501 5097498 YP_001171945.1 CDS PST_1412 NC_009434.1 1509197 1510969 R EAL/GGDEF domain-containing protein complement(1509197..1510969) Pseudomonas stutzeri A1501 5097499 YP_001171946.1 CDS prc NC_009434.1 1511421 1513718 R Code: M; COG: COG0793; periplasmic tail-specific protease complement(1511421..1513718) Pseudomonas stutzeri A1501 5097500 YP_001171947.1 CDS PST_1413 NC_009434.1 1513674 1514636 D Code: CR; COG: COG0604; oxidoreductase 1513674..1514636 Pseudomonas stutzeri A1501 5097501 YP_001171948.1 CDS PST_1415 NC_009434.1 1514692 1515876 R Code: S; COG: COG4924; hypothetical protein complement(1514692..1515876) Pseudomonas stutzeri A1501 5097502 YP_001171949.1 CDS PST_1416 NC_009434.1 1515897 1516250 R Code: S; COG: COG2361; nucleotidyltransferase complement(1515897..1516250) Pseudomonas stutzeri A1501 5097503 YP_001171950.1 CDS PST_1417 NC_009434.1 1516243 1516533 R Code: R; COG: COG1669; nucleotidyltransferase family protein complement(1516243..1516533) Pseudomonas stutzeri A1501 5097504 YP_001171951.1 CDS PST_1418 NC_009434.1 1516576 1519959 R Code: S; COG: COG4913; hypothetical protein complement(1516576..1519959) Pseudomonas stutzeri A1501 5097505 YP_001171952.1 CDS PST_1419 NC_009434.1 1519956 1520546 R hypothetical protein complement(1519956..1520546) Pseudomonas stutzeri A1501 5097506 YP_001171953.1 CDS PST_1420 NC_009434.1 1520551 1521987 R hypothetical protein complement(1520551..1521987) Pseudomonas stutzeri A1501 5097507 YP_001171954.1 CDS PST_1421 NC_009434.1 1521987 1523276 R catalyzes the removal of amino acids from the N termini of peptides; putative aminopeptidase 2 complement(1521987..1523276) Pseudomonas stutzeri A1501 5097508 YP_001171955.1 CDS rluA NC_009434.1 1523424 1524158 R Code: J; COG: COG0564; pseudouridine synthase RluA complement(1523424..1524158) Pseudomonas stutzeri A1501 5097509 YP_001171956.1 CDS minE NC_009434.1 1524263 1524520 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(1524263..1524520) Pseudomonas stutzeri A1501 5097510 YP_001171957.1 CDS minD NC_009434.1 1524517 1525167 R Code: D; COG: COG2894; cell division inhibitor MinD complement(1524517..1525167) Pseudomonas stutzeri A1501 5097511 YP_001171958.1 CDS minC NC_009434.1 1525430 1526155 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(1525430..1526155) Pseudomonas stutzeri A1501 5097512 YP_001171959.1 CDS htrB NC_009434.1 1526175 1527260 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 1526175..1527260 Pseudomonas stutzeri A1501 5097513 YP_001171960.1 CDS PST_1427 NC_009434.1 1527297 1528139 R Code: R; COG: COG1741; pirin-like protein complement(1527297..1528139) Pseudomonas stutzeri A1501 5097514 YP_001171961.1 CDS PST_1428 NC_009434.1 1528234 1529145 R Code: M; COG: COG2853; lipoprotein complement(1528234..1529145) Pseudomonas stutzeri A1501 5097515 YP_001171962.1 CDS PST_1429 NC_009434.1 1529138 1530430 R hypothetical protein complement(1529138..1530430) Pseudomonas stutzeri A1501 5097516 YP_001171963.1 CDS PST_1430 NC_009434.1 1530623 1530808 R Code: S; COG: COG3205; hypothetical protein complement(1530623..1530808) Pseudomonas stutzeri A1501 5097517 YP_001171964.1 CDS PST_1431 NC_009434.1 1531117 1531431 D Code: S; COG: COG3162; hypothetical protein 1531117..1531431 Pseudomonas stutzeri A1501 5097518 YP_001171965.1 CDS PST_1432 NC_009434.1 1531431 1533086 D Code: R; COG: COG4147; sodium:solute symporter 1531431..1533086 Pseudomonas stutzeri A1501 5097519 YP_001171966.1 CDS PST_1433 NC_009434.1 1533322 1534131 D Code: IQR; COG: COG1028; short chain dehydrogenase 1533322..1534131 Pseudomonas stutzeri A1501 5097520 YP_001171967.1 CDS PST_1434 NC_009434.1 1534235 1535392 D Code: P; COG: COG2807; MFS family transporter 1534235..1535392 Pseudomonas stutzeri A1501 5097521 YP_001171968.1 CDS PST_1435 NC_009434.1 1535505 1535933 D hypothetical protein 1535505..1535933 Pseudomonas stutzeri A1501 5097522 YP_001171969.1 CDS PST_1436 NC_009434.1 1535946 1536173 R Code: S; COG: COG3089; hypothetical protein complement(1535946..1536173) Pseudomonas stutzeri A1501 5097523 YP_001171970.1 CDS PST_1437 NC_009434.1 1536217 1538961 R sensor/response regulator hybrid protein complement(1536217..1538961) Pseudomonas stutzeri A1501 5097524 YP_001171971.1 CDS PST_1438 NC_009434.1 1539158 1540363 R Code: G; COG: COG1363; glutamyl aminopeptidase family protein complement(1539158..1540363) Pseudomonas stutzeri A1501 5097525 YP_001171972.1 CDS PST_1439 NC_009434.1 1540489 1542228 R acetyltransferase complement(1540489..1542228) Pseudomonas stutzeri A1501 5097526 YP_001171973.1 CDS asnB NC_009434.1 1542366 1544138 R Code: E; COG: COG0367; asparagine synthetase complement(1542366..1544138) Pseudomonas stutzeri A1501 5097527 YP_001171974.1 CDS PST_1441 NC_009434.1 1544309 1544788 D Code: K; COG: COG1846; transcriptional regulator 1544309..1544788 Pseudomonas stutzeri A1501 5097528 YP_001171975.1 CDS PST_1442 NC_009434.1 1544795 1546564 R Code: O; COG: COG1404; subtilisin-like serine protease complement(1544795..1546564) Pseudomonas stutzeri A1501 5097529 YP_001171976.1 CDS PST_1443 NC_009434.1 1546568 1547530 R Code: S; COG: COG4301; hypothetical protein complement(1546568..1547530) Pseudomonas stutzeri A1501 5097530 YP_001171977.1 CDS PST_1444 NC_009434.1 1547533 1548828 R Code: S; COG: COG1262; hypothetical protein complement(1547533..1548828) Pseudomonas stutzeri A1501 5097531 YP_001171978.1 CDS PST_1445 NC_009434.1 1548969 1549784 D putative secreted protein 1548969..1549784 Pseudomonas stutzeri A1501 5097532 YP_001171979.1 CDS PST_1446 NC_009434.1 1549794 1550489 R Code: R; COG: COG4221; short chain dehydrogenase/reductase family oxidoreductase complement(1549794..1550489) Pseudomonas stutzeri A1501 5097533 YP_001171980.1 CDS PST_1448 NC_009434.1 1550499 1550960 R hypothetical protein complement(1550499..1550960) Pseudomonas stutzeri A1501 5097534 YP_001171981.1 CDS PST_1447 NC_009434.1 1550928 1555241 D Code: R; COG: COG1201; ATP-dependent DNA helicase 1550928..1555241 Pseudomonas stutzeri A1501 5097535 YP_001171982.1 CDS PST_1449 NC_009434.1 1555252 1556115 R putative lipoprotein complement(1555252..1556115) Pseudomonas stutzeri A1501 5097536 YP_001171983.1 CDS PST_1450 NC_009434.1 1556506 1557057 R hypothetical protein complement(1556506..1557057) Pseudomonas stutzeri A1501 5097537 YP_001171984.1 CDS PST_1451 NC_009434.1 1557136 1557906 R hypothetical protein complement(1557136..1557906) Pseudomonas stutzeri A1501 5097538 YP_001171985.1 CDS PST_1452 NC_009434.1 1558025 1558750 R Code: J; COG: COG1187; S4 domain-containing protein complement(1558025..1558750) Pseudomonas stutzeri A1501 5097539 YP_001171986.1 CDS PST_1453 NC_009434.1 1558835 1559032 R hypothetical protein complement(1558835..1559032) Pseudomonas stutzeri A1501 5097540 YP_001171987.1 CDS PST_1454 NC_009434.1 1559192 1560340 D Code: G; COG: COG2133; hydrophobic compound transport factor 1559192..1560340 Pseudomonas stutzeri A1501 5097541 YP_001171988.1 CDS PST_1455 NC_009434.1 1560496 1562829 D Code: G; COG: COG4993; glucose dehydrogenase 1560496..1562829 Pseudomonas stutzeri A1501 5097542 YP_001171989.1 CDS PST_1456 NC_009434.1 1562810 1563697 D Code: S; COG: COG2996; RNA binding S1 1562810..1563697 Pseudomonas stutzeri A1501 5097543 YP_001171990.1 CDS PST_1457 NC_009434.1 1563711 1564289 R Code: S; COG: COG5483; hypothetical protein complement(1563711..1564289) Pseudomonas stutzeri A1501 5097544 YP_001171991.1 CDS PST_1458 NC_009434.1 1564294 1564539 R hypothetical protein complement(1564294..1564539) Pseudomonas stutzeri A1501 5097545 YP_001171992.1 CDS PST_1459 NC_009434.1 1565040 1567118 D hypothetical protein 1565040..1567118 Pseudomonas stutzeri A1501 5097546 YP_001171993.1 CDS PST_1460 NC_009434.1 1567328 1568335 D hypothetical protein 1567328..1568335 Pseudomonas stutzeri A1501 5097547 YP_001171994.1 CDS PST_1461 NC_009434.1 1568332 1568760 D hypothetical protein 1568332..1568760 Pseudomonas stutzeri A1501 5097548 YP_001171995.1 CDS PST_1462 NC_009434.1 1568757 1569515 D hypothetical protein 1568757..1569515 Pseudomonas stutzeri A1501 5097549 YP_001171996.1 CDS PST_1464 NC_009434.1 1569760 1570065 D hypothetical protein 1569760..1570065 Pseudomonas stutzeri A1501 5097551 YP_001171997.1 CDS PST_1465 NC_009434.1 1570094 1570294 D hypothetical protein 1570094..1570294 Pseudomonas stutzeri A1501 5097552 YP_001171998.1 CDS PST_1466 NC_009434.1 1570386 1571033 D hypothetical protein 1570386..1571033 Pseudomonas stutzeri A1501 5097553 YP_001171999.1 CDS hsdR NC_009434.1 1571197 1573674 D Code: V; COG: COG4096; type I restriction-modification system, R subunit 1571197..1573674 Pseudomonas stutzeri A1501 5097554 YP_001172000.1 CDS PST_1468 NC_009434.1 1573743 1575047 D hypothetical protein 1573743..1575047 Pseudomonas stutzeri A1501 5097555 YP_001172001.1 CDS PST_1469 NC_009434.1 1575194 1576516 D Code: V; COG: COG0286; type I restriction-modification system, M subunit 1575194..1576516 Pseudomonas stutzeri A1501 5097556 YP_001172002.1 CDS PST_1470 NC_009434.1 1576513 1577481 D death-on-curing family protein 1576513..1577481 Pseudomonas stutzeri A1501 5097557 YP_001172003.1 CDS hsdS NC_009434.1 1577478 1579061 D type I restriction-modification system subunit S 1577478..1579061 Pseudomonas stutzeri A1501 5097558 YP_001172004.1 CDS PST_1472 NC_009434.1 1579078 1580163 D hypothetical protein 1579078..1580163 Pseudomonas stutzeri A1501 5097559 YP_001172005.1 CDS PST_1473 NC_009434.1 1580205 1582556 D hypothetical protein 1580205..1582556 Pseudomonas stutzeri A1501 5097560 YP_001172006.1 CDS PST_1474 NC_009434.1 1582556 1583320 D Code: N; COG: COG1360; chemotaxis protein MotB-related protein 1582556..1583320 Pseudomonas stutzeri A1501 5097561 YP_001172007.1 CDS PST_1475 NC_009434.1 1583317 1583949 D hypothetical protein 1583317..1583949 Pseudomonas stutzeri A1501 5097562 YP_001172008.1 CDS PST_1476 NC_009434.1 1583968 1584459 D hypothetical protein 1583968..1584459 Pseudomonas stutzeri A1501 5097563 YP_001172009.1 CDS PST_1477 NC_009434.1 1584476 1585126 R Code: L; COG: COG1484; ISPsy14, transposition helper protein complement(1584476..1585126) Pseudomonas stutzeri A1501 5097564 YP_001172010.1 CDS PST_1478 NC_009434.1 1585113 1586771 R Code: L; COG: COG4584; ISPsy14, transposase complement(1585113..1586771) Pseudomonas stutzeri A1501 5097565 YP_001172011.1 CDS PST_1479 NC_009434.1 1586969 1588219 D hypothetical protein 1586969..1588219 Pseudomonas stutzeri A1501 5097566 YP_001172012.1 CDS PST_1480 NC_009434.1 1588219 1591257 D Code: KL; COG: COG0553; helicase 1588219..1591257 Pseudomonas stutzeri A1501 5097567 YP_001172013.1 CDS PST_1481 NC_009434.1 1591507 1591980 D hypothetical protein 1591507..1591980 Pseudomonas stutzeri A1501 5097568 YP_001172014.1 CDS PST_1482 NC_009434.1 1592503 1592814 D hypothetical protein 1592503..1592814 Pseudomonas stutzeri A1501 5097569 YP_001172015.1 CDS PST_1483 NC_009434.1 1593084 1593374 R hypothetical protein complement(1593084..1593374) Pseudomonas stutzeri A1501 5097570 YP_001172016.1 CDS PST_1484 NC_009434.1 1593692 1595320 R hypothetical protein complement(1593692..1595320) Pseudomonas stutzeri A1501 5097571 YP_001172017.1 CDS PST_1485 NC_009434.1 1595320 1596195 R Code: S; COG: COG4643; TOPRIM domain-containing protein complement(1595320..1596195) Pseudomonas stutzeri A1501 5097572 YP_001172018.1 CDS PST_1486 NC_009434.1 1596528 1597373 R Code: L; COG: COG2801; IS3 family transposase complement(1596528..1597373) Pseudomonas stutzeri A1501 5097573 YP_001172019.1 CDS PST_1487 NC_009434.1 1597400 1597678 R Code: L; COG: COG2963; transposase family protein complement(1597400..1597678) Pseudomonas stutzeri A1501 5097574 YP_001172020.1 CDS PST_1488 NC_009434.1 1597727 1597975 R hypothetical protein complement(1597727..1597975) Pseudomonas stutzeri A1501 5097575 YP_001172021.1 CDS PST_1489 NC_009434.1 1597972 1599375 R integrase complement(1597972..1599375) Pseudomonas stutzeri A1501 5097576 YP_001172022.1 CDS PST_1491 NC_009434.1 1599646 1601124 R Code: GEPR; COG: COG0477; MFS family transporter complement(1599646..1601124) Pseudomonas stutzeri A1501 5097579 YP_001172023.1 CDS pobA NC_009434.1 1602811 1603995 D catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 1602811..1603995 Pseudomonas stutzeri A1501 5097580 YP_001172024.1 CDS PST_1497 NC_009434.1 1606361 1607866 R Code: T; COG: COG2199; diguanylate cyclase complement(1606361..1607866) Pseudomonas stutzeri A1501 5097582 YP_001172025.1 CDS PST_1498 NC_009434.1 1608289 1609272 R hypothetical protein complement(1608289..1609272) Pseudomonas stutzeri A1501 5097583 YP_001172026.1 CDS PST_1499 NC_009434.1 1610168 1610965 D Code: S; COG: COG1295; ribonuclease BN 1610168..1610965 Pseudomonas stutzeri A1501 5097584 YP_001172027.1 CDS PST_1500 NC_009434.1 1611143 1612237 D Code: M; COG: COG0438; glycoside hydrolase family protein 1611143..1612237 Pseudomonas stutzeri A1501 5097585 YP_001172028.1 CDS PST_1501 NC_009434.1 1612230 1612991 D Code: R; COG: COG3233; deacetylase 1612230..1612991 Pseudomonas stutzeri A1501 5097586 YP_001172029.1 CDS PST_1502 NC_009434.1 1612988 1613980 D Code: S; COG: COG0392; hypothetical protein 1612988..1613980 Pseudomonas stutzeri A1501 5097587 YP_001172030.1 CDS PST_1503 NC_009434.1 1614068 1614259 D Code: S; COG: COG3237; hypothetical protein 1614068..1614259 Pseudomonas stutzeri A1501 5097588 YP_001172031.1 CDS fdxA NC_009434.1 1614326 1614649 R Code: C; COG: COG1146; ferredoxin I complement(1614326..1614649) Pseudomonas stutzeri A1501 5097589 YP_001172032.1 CDS mutS NC_009434.1 1614771 1617446 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1614771..1617446) Pseudomonas stutzeri A1501 5097590 YP_001172033.1 CDS PST_1506 NC_009434.1 1617818 1618921 D hypothetical protein 1617818..1618921 Pseudomonas stutzeri A1501 5097591 YP_001172034.1 CDS PST_1507 NC_009434.1 1618893 1619534 D Code: R; COG: COG1546; CinA domain-containing protein 1618893..1619534 Pseudomonas stutzeri A1501 5097592 YP_001172035.2 CDS recA NC_009434.1 1619618 1620664 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1619618..1620664 Pseudomonas stutzeri A1501 5097593 YP_001172036.1 CDS recX NC_009434.1 1620715 1621137 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1620715..1621137 Pseudomonas stutzeri A1501 5097594 YP_001172037.1 CDS PST_1510 NC_009434.1 1621214 1622305 R Code: R; COG: COG1611; decarboxylase family protein complement(1621214..1622305) Pseudomonas stutzeri A1501 5097595 YP_001172038.1 CDS PST_1511 NC_009434.1 1622418 1623935 R Code: J; COG: COG1236; metallo-beta-lactamase superfamily protein complement(1622418..1623935) Pseudomonas stutzeri A1501 5097596 YP_001172039.1 CDS PST_1512 NC_009434.1 1623960 1626377 D Code: G; COG: COG3957; phosphoketolase 1623960..1626377 Pseudomonas stutzeri A1501 5097597 YP_001172040.1 CDS PST_1513 NC_009434.1 1626432 1626827 R hypothetical protein complement(1626432..1626827) Pseudomonas stutzeri A1501 5097598 YP_001172041.1 CDS PST_1514 NC_009434.1 1626953 1627672 D Code: S; COG: COG3148; hypothetical protein 1626953..1627672 Pseudomonas stutzeri A1501 5097599 YP_001172042.1 CDS PST_1515 NC_009434.1 1627677 1628588 R Code: GER; COG: COG0697; hypothetical protein complement(1627677..1628588) Pseudomonas stutzeri A1501 5097600 YP_001172043.1 CDS PST_1516 NC_009434.1 1628905 1629483 D Code: TK; COG: COG2197; two-component response regulator 1628905..1629483 Pseudomonas stutzeri A1501 5097601 YP_001172044.1 CDS PST_1517 NC_009434.1 1629502 1630428 R Code: K; COG: COG0583; LysR family transcriptional regulator complement(1629502..1630428) Pseudomonas stutzeri A1501 5097602 YP_001172045.1 CDS fpr NC_009434.1 1630541 1631317 D Code: C; COG: COG1018; ferredoxin--NADP reductase 1630541..1631317 Pseudomonas stutzeri A1501 5097603 YP_001172046.1 CDS PST_1519 NC_009434.1 1631378 1631914 R Code: S; COG: COG3012; hypothetical protein complement(1631378..1631914) Pseudomonas stutzeri A1501 5097604 YP_001172047.1 CDS PST_1520 NC_009434.1 1631865 1632365 R hypothetical protein complement(1631865..1632365) Pseudomonas stutzeri A1501 5097605 YP_001172048.1 CDS PST_1521 NC_009434.1 1632499 1633137 D Code: M; COG: COG2885; outer membrane protein 1632499..1633137 Pseudomonas stutzeri A1501 5097606 YP_001172049.1 CDS PST_1522 NC_009434.1 1633196 1633660 R Code: S; COG: COG5615; integral membrane protein complement(1633196..1633660) Pseudomonas stutzeri A1501 5097607 YP_001172050.1 CDS dinG NC_009434.1 1633840 1635891 D helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 1633840..1635891 Pseudomonas stutzeri A1501 5097608 YP_001172051.1 CDS estC NC_009434.1 1636003 1637151 D Code: V; COG: COG1680; carboxylesterase 1636003..1637151 Pseudomonas stutzeri A1501 5097609 YP_001172052.1 CDS PST_1525 NC_009434.1 1637227 1637916 D putative outer membrane protein 1637227..1637916 Pseudomonas stutzeri A1501 5097610 YP_001172053.1 CDS pdxH NC_009434.1 1638108 1638755 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 1638108..1638755 Pseudomonas stutzeri A1501 5097611 YP_001172054.1 CDS PST_1527 NC_009434.1 1638931 1639167 R 30S ribosomal protein S3 complement(1638931..1639167) Pseudomonas stutzeri A1501 5097612 YP_001172055.1 CDS PST_1528 NC_009434.1 1639333 1639794 D Code: M; COG: COG3133; outer membrane lipoprotein 1639333..1639794 Pseudomonas stutzeri A1501 5097613 YP_001172056.1 CDS PST_1529 NC_009434.1 1640015 1642807 D subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 1640015..1642807 Pseudomonas stutzeri A1501 5097614 YP_001172057.1 CDS PST_1530 NC_009434.1 1642807 1643136 D subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 1642807..1643136 Pseudomonas stutzeri A1501 5097615 YP_001172058.1 CDS PST_1531 NC_009434.1 1643133 1644632 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 1643133..1644632 Pseudomonas stutzeri A1501 5097616 YP_001172059.1 CDS PST_1532 NC_009434.1 1644629 1645129 D Code: P; COG: COG1863; multisubunit Na+/H+ antiporter, MnhE subunit 1644629..1645129 Pseudomonas stutzeri A1501 5097617 YP_001172060.1 CDS PST_1533 NC_009434.1 1645114 1645383 D Code: P; COG: COG2212; multisubunit Na+/H+ antiporter subunit MnhF 1645114..1645383 Pseudomonas stutzeri A1501 5097618 YP_001172061.1 CDS PST_1534 NC_009434.1 1645393 1645722 D subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit G 1645393..1645722 Pseudomonas stutzeri A1501 5097619 YP_001172062.1 CDS glnD NC_009434.1 1645765 1648467 R Catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase complement(1645765..1648467) Pseudomonas stutzeri A1501 5097620 YP_001172063.1 CDS map NC_009434.1 1648504 1649286 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1648504..1649286) Pseudomonas stutzeri A1501 5097621 YP_001172064.1 CDS rpsB NC_009434.1 1649573 1650313 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1649573..1650313 Pseudomonas stutzeri A1501 5097622 YP_001172065.1 CDS tsf NC_009434.1 1650441 1651304 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1650441..1651304 Pseudomonas stutzeri A1501 5097623 YP_001172066.1 CDS pyrH NC_009434.1 1651504 1652247 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1651504..1652247 Pseudomonas stutzeri A1501 5097624 YP_001172067.1 CDS frr NC_009434.1 1652280 1652801 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1652280..1652801 Pseudomonas stutzeri A1501 5097625 YP_001172068.1 CDS uppS NC_009434.1 1652842 1653687 D Code: I; COG: COG0020; undecaprenyl diphosphate synthase 1652842..1653687 Pseudomonas stutzeri A1501 5097626 YP_001172069.1 CDS cdsA NC_009434.1 1653816 1654496 D Code: I; COG: COG0575; phosphatidate cytidylyltransferase 1653816..1654496 Pseudomonas stutzeri A1501 5097627 YP_001172070.1 CDS dxr NC_009434.1 1654493 1655683 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1654493..1655683 Pseudomonas stutzeri A1501 5097628 YP_001172071.1 CDS PST_1544 NC_009434.1 1655744 1657096 D Code: M; COG: COG0750; membrane-associated zinc metalloprotease 1655744..1657096 Pseudomonas stutzeri A1501 5097629 YP_001172072.1 CDS PST_1545 NC_009434.1 1657202 1659517 D Code: M; COG: COG4775; surface antigen family outer membrane protein 1657202..1659517 Pseudomonas stutzeri A1501 5097630 YP_001172073.1 CDS ompH NC_009434.1 1659530 1660069 D Code: M; COG: COG2825; outer membrane protein OmpH 1659530..1660069 Pseudomonas stutzeri A1501 5097631 YP_001172074.1 CDS lpxD NC_009434.1 1660083 1661129 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1660083..1661129 Pseudomonas stutzeri A1501 5097632 YP_001172075.1 CDS fabZ NC_009434.1 1661234 1661671 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1661234..1661671 Pseudomonas stutzeri A1501 5097633 YP_001172076.1 CDS lpxA NC_009434.1 1661668 1662444 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1661668..1662444 Pseudomonas stutzeri A1501 5097634 YP_001172077.1 CDS lpxB NC_009434.1 1662575 1663579 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1662575..1663579 Pseudomonas stutzeri A1501 5097635 YP_001172078.1 CDS rnhB NC_009434.1 1663579 1664217 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1663579..1664217 Pseudomonas stutzeri A1501 5097636 YP_001172079.1 CDS dnaE NC_009434.1 1664504 1667899 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1664504..1667899 Pseudomonas stutzeri A1501 5097637 YP_001172080.1 CDS accA NC_009434.1 1668084 1669034 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1668084..1669034 Pseudomonas stutzeri A1501 5097638 YP_001172081.1 CDS PST_1554 NC_009434.1 1669301 1670449 D Code: D; COG: COG0037; cell cycle protein mesJ 1669301..1670449 Pseudomonas stutzeri A1501 5097639 YP_001172082.1 CDS pyrG NC_009434.1 1670617 1672248 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1670617..1672248 Pseudomonas stutzeri A1501 5097640 YP_001172083.1 CDS kdsA NC_009434.1 1672245 1673090 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1672245..1673090 Pseudomonas stutzeri A1501 5097641 YP_001172084.1 CDS eno NC_009434.1 1673050 1674414 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1673050..1674414 Pseudomonas stutzeri A1501 5097642 YP_001172085.1 CDS PST_1558 NC_009434.1 1674507 1674833 D Code: D; COG: COG2919; septum formation initiator 1674507..1674833 Pseudomonas stutzeri A1501 5097643 YP_001172086.1 CDS ispD NC_009434.1 1674830 1675534 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1674830..1675534 Pseudomonas stutzeri A1501 5097644 YP_001172087.1 CDS PST_1560 NC_009434.1 1675563 1676729 R hypothetical protein complement(1675563..1676729) Pseudomonas stutzeri A1501 5097645 YP_001172088.1 CDS PST_1561 NC_009434.1 1676806 1677120 R ribosomal subunit interface protein complement(1676806..1677120) Pseudomonas stutzeri A1501 5097646 YP_001172089.1 CDS PST_1562 NC_009434.1 1677238 1678137 R Code: K; COG: COG0583; LysR family transcriptional regulator complement(1677238..1678137) Pseudomonas stutzeri A1501 5097647 YP_001172090.1 CDS adhC NC_009434.1 1678281 1679405 D Code: C; COG: COG1062; alcohol dehydrogenase class III 1678281..1679405 Pseudomonas stutzeri A1501 5097648 YP_001172091.1 CDS PST_1564 NC_009434.1 1679494 1680339 D Code: R; COG: COG0627; esterase, putative 1679494..1680339 Pseudomonas stutzeri A1501 5097649 YP_001172092.1 CDS xenB NC_009434.1 1680315 1681883 R Code: C; COG: COG1902; xenobiotic reductase complement(1680315..1681883) Pseudomonas stutzeri A1501 5097650 YP_001172093.1 CDS ispF NC_009434.1 1682006 1682479 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1682006..1682479 Pseudomonas stutzeri A1501 5097651 YP_001172094.1 CDS truD NC_009434.1 1682476 1683516 D catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 1682476..1683516 Pseudomonas stutzeri A1501 5097652 YP_001172095.1 CDS surE NC_009434.1 1683516 1684265 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1683516..1684265 Pseudomonas stutzeri A1501 5097653 YP_001172096.1 CDS pcm NC_009434.1 1684262 1684939 D catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 1684262..1684939 Pseudomonas stutzeri A1501 5097654 YP_001172097.1 CDS PST_1570 NC_009434.1 1684959 1685894 D Code: S; COG: COG2035; hypothetical protein 1684959..1685894 Pseudomonas stutzeri A1501 5097655 YP_001172098.1 CDS nlpD NC_009434.1 1685962 1686777 D Code: M; COG: COG0739; lipoprotein NlpD 1685962..1686777 Pseudomonas stutzeri A1501 5097656 YP_001172099.1 CDS rpoS NC_009434.1 1686876 1687874 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 1686876..1687874 Pseudomonas stutzeri A1501 5097657 YP_001172100.1 CDS PST_1573 NC_009434.1 1688377 1688562 D hypothetical protein 1688377..1688562 Pseudomonas stutzeri A1501 5097658 YP_001172101.1 CDS PST_1575 NC_009434.1 1688567 1689427 R hypothetical protein complement(1688567..1689427) Pseudomonas stutzeri A1501 5097659 YP_001172102.1 CDS PST_1574 NC_009434.1 1689397 1691520 D sodium/glucose cotransport protein 1689397..1691520 Pseudomonas stutzeri A1501 5097660 YP_001172103.1 CDS PST_1576 NC_009434.1 1691827 1692303 D hypothetical protein 1691827..1692303 Pseudomonas stutzeri A1501 5097661 YP_001172104.1 CDS PST_1577 NC_009434.1 1692370 1693161 R Sir2 family NAD-dependent protein deacetylase complement(1692370..1693161) Pseudomonas stutzeri A1501 5097662 YP_001172105.1 CDS PST_1578 NC_009434.1 1693168 1693770 R Code: F; COG: COG0127; nucleoside-triphosphatase complement(1693168..1693770) Pseudomonas stutzeri A1501 5097663 YP_001172106.1 CDS PST_1579 NC_009434.1 1693960 1694481 R Code: R; COG: COG2346; hypothetical protein complement(1693960..1694481) Pseudomonas stutzeri A1501 5097664 YP_001172107.1 CDS PST_1580 NC_009434.1 1694621 1694965 D Code: T; COG: COG0589; universal stress protein 1694621..1694965 Pseudomonas stutzeri A1501 5097665 YP_001172108.1 CDS PST_1581 NC_009434.1 1694989 1695333 R restriction endonuclease complement(1694989..1695333) Pseudomonas stutzeri A1501 5097666 YP_001172109.1 CDS PST_1582 NC_009434.1 1695431 1696129 R Code: S; COG: COG0217; hypothetical protein complement(1695431..1696129) Pseudomonas stutzeri A1501 5097667 YP_001172110.1 CDS PST_1583 NC_009434.1 1696362 1697390 D Code: L; COG: COG2826; transposase 1696362..1697390 Pseudomonas stutzeri A1501 5097668 YP_001172111.1 CDS PST_1584 NC_009434.1 1697447 1698331 D Code: GER; COG: COG0697; hypothetical protein 1697447..1698331 Pseudomonas stutzeri A1501 5097669 YP_001172112.1 CDS PST_1585 NC_009434.1 1698370 1698639 R hypothetical protein complement(1698370..1698639) Pseudomonas stutzeri A1501 5097670 YP_001172113.1 CDS PST_1586 NC_009434.1 1698742 1699350 R Code: S; COG: COG2258; hypothetical protein complement(1698742..1699350) Pseudomonas stutzeri A1501 5097671 YP_001172114.1 CDS PST_1587 NC_009434.1 1699440 1699628 R hypothetical protein complement(1699440..1699628) Pseudomonas stutzeri A1501 5097672 YP_001172115.1 CDS dgt NC_009434.1 1699735 1701231 D forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 1699735..1701231 Pseudomonas stutzeri A1501 5097673 YP_001172116.1 CDS PST_1589 NC_009434.1 1701632 1702765 D Code: P; COG: COG0004; ammonium transporter 1701632..1702765 Pseudomonas stutzeri A1501 5097674 YP_001172117.1 CDS PST_1590 NC_009434.1 1702792 1703724 R Code: HE; COG: COG0111; putative 2-hydroxyacid dehydrogenase complement(1702792..1703724) Pseudomonas stutzeri A1501 5097675 YP_001172118.1 CDS PST_1591 NC_009434.1 1703841 1704077 D hypothetical protein 1703841..1704077 Pseudomonas stutzeri A1501 5097676 YP_001172119.1 CDS PST_1592 NC_009434.1 1704125 1704520 R oxidoreductase complement(1704125..1704520) Pseudomonas stutzeri A1501 5097677 YP_001172120.1 CDS PST_1593 NC_009434.1 1704547 1705506 D Code: G; COG: COG0483; inositol-1-monophosphatase 1704547..1705506 Pseudomonas stutzeri A1501 5097678 YP_001172121.1 CDS PST_1594 NC_009434.1 1705690 1705944 D hypothetical protein 1705690..1705944 Pseudomonas stutzeri A1501 5097679 YP_001172122.1 CDS PST_1595 NC_009434.1 1706249 1706662 D ribosomal subunit interface protein 1706249..1706662 Pseudomonas stutzeri A1501 5097680 YP_001172123.1 CDS PST_1596 NC_009434.1 1707247 1707615 R hypothetical protein complement(1707247..1707615) Pseudomonas stutzeri A1501 5097681 YP_001172124.1 CDS PST_1597 NC_009434.1 1707865 1709508 D Code: NT; COG: COG0840; methyl-accepting chemotaxis transducer 1707865..1709508 Pseudomonas stutzeri A1501 5097682 YP_001172125.1 CDS PST_1598 NC_009434.1 1709596 1709877 R Code: O; COG: COG0760; peptidyl-prolyl cis-trans isomerase C complement(1709596..1709877) Pseudomonas stutzeri A1501 5097683 YP_001172126.1 CDS PST_1599 NC_009434.1 1709977 1710948 R Code: P; COG: COG0226; phosphate ABC transporter substrate-binding protein complement(1709977..1710948) Pseudomonas stutzeri A1501 5097684 YP_001172127.1 CDS PST_1600 NC_009434.1 1711219 1712379 R Code: P; COG: COG1283; Na+/Pi-cotransporter complement(1711219..1712379) Pseudomonas stutzeri A1501 5097685 YP_001172128.1 CDS glpD NC_009434.1 1712569 1714104 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(1712569..1714104) Pseudomonas stutzeri A1501 5097686 YP_001172129.1 CDS glpR NC_009434.1 1714534 1715292 R Code: KG; COG: COG1349; glycerol-3-phosphate regulon repressor complement(1714534..1715292) Pseudomonas stutzeri A1501 5097687 YP_001172130.1 CDS glpK NC_009434.1 1715425 1716933 R Code: C; COG: COG0554; glycerol kinase complement(1715425..1716933) Pseudomonas stutzeri A1501 5097688 YP_001172131.1 CDS glpF NC_009434.1 1716946 1717827 R Code: G; COG: COG0580; glycerol uptake facilitator protein complement(1716946..1717827) Pseudomonas stutzeri A1501 5097689 YP_001172132.1 CDS PST_1605 NC_009434.1 1718012 1718776 R hypothetical protein complement(1718012..1718776) Pseudomonas stutzeri A1501 5097690 YP_001172133.1 CDS PST_1606 NC_009434.1 1718854 1721214 R ATP-dependent RNA helicase complement(1718854..1721214) Pseudomonas stutzeri A1501 5097691 YP_001172134.1 CDS PST_1607 NC_009434.1 1721307 1722083 R Code: P; COG: COG1226; ion transporter complement(1721307..1722083) Pseudomonas stutzeri A1501 5097692 YP_001172135.1 CDS PST_1608 NC_009434.1 1722093 1722905 D Code: S; COG: COG1801; hypothetical protein 1722093..1722905 Pseudomonas stutzeri A1501 5097693 YP_001172136.1 CDS PST_1609 NC_009434.1 1722921 1723517 R hypothetical protein complement(1722921..1723517) Pseudomonas stutzeri A1501 5097694 YP_001172137.1 CDS PST_1610 NC_009434.1 1724021 1725619 D Code: E; COG: COG1231; flavin monoamine oxidase-related protein 1724021..1725619 Pseudomonas stutzeri A1501 5097695 YP_001172138.1 CDS PST_1611 NC_009434.1 1725639 1726049 D Code: C; COG: COG2010; cytochrome C6 1725639..1726049 Pseudomonas stutzeri A1501 5097696 YP_001172139.1 CDS PST_1612 NC_009434.1 1726077 1726547 D Code: J; COG: COG0251; putative endoribonuclease L-PSP 1726077..1726547 Pseudomonas stutzeri A1501 5097697 YP_001172140.1 CDS PST_1613 NC_009434.1 1726849 1728255 D Code: G; COG: COG2814; sugar efflux transporter 1726849..1728255 Pseudomonas stutzeri A1501 5097698 YP_001172141.1 CDS PST_1614 NC_009434.1 1728320 1730443 R Code: O; COG: COG0826; U32 family peptidase complement(1728320..1730443) Pseudomonas stutzeri A1501 5097699 YP_001172142.1 CDS PST_1615 NC_009434.1 1730468 1731502 R MerR family transcriptional regulator complement(1730468..1731502) Pseudomonas stutzeri A1501 5097700 YP_001172143.1 CDS PST_1616 NC_009434.1 1731659 1732060 R hypothetical protein complement(1731659..1732060) Pseudomonas stutzeri A1501 5097701 YP_001172144.1 CDS PST_1617 NC_009434.1 1732212 1733048 D Code: S; COG: COG2340; hypothetical protein 1732212..1733048 Pseudomonas stutzeri A1501 5097702 YP_001172145.1 CDS PST_1618 NC_009434.1 1732987 1735083 D isoleucyl-tRNA synthetase 1732987..1735083 Pseudomonas stutzeri A1501 5097703 YP_001172146.1 CDS PST_1619 NC_009434.1 1735101 1735748 R Code: P; COG: COG1230; Co/Zn/Cd efflux system protein complement(1735101..1735748) Pseudomonas stutzeri A1501 5097704 YP_001172147.1 CDS PST_1620 NC_009434.1 1735812 1736249 D Code: K; COG: COG0789; MerR family transcriptional regulator 1735812..1736249 Pseudomonas stutzeri A1501 5097705 YP_001172148.1 CDS gnl NC_009434.1 1736706 1737878 R Code: G; COG: COG3386; gluconolactonase complement(1736706..1737878) Pseudomonas stutzeri A1501 5097706 YP_001172149.1 CDS PST_1622 NC_009434.1 1738131 1739135 D sterol desaturase 1738131..1739135 Pseudomonas stutzeri A1501 5097707 YP_001172150.1 CDS PST_1623 NC_009434.1 1739230 1739478 D hypothetical protein 1739230..1739478 Pseudomonas stutzeri A1501 5097708 YP_001172151.1 CDS PST_1624 NC_009434.1 1739514 1740413 R Code: K; COG: COG0583; transcriptional regulator complement(1739514..1740413) Pseudomonas stutzeri A1501 5097709 YP_001172152.1 CDS PST_1625 NC_009434.1 1740494 1741282 D Code: R; COG: COG2249; NAD(P)H dehydrogenase 1740494..1741282 Pseudomonas stutzeri A1501 5097710 YP_001172153.1 CDS PST_1626 NC_009434.1 1741370 1741933 R hypothetical protein complement(1741370..1741933) Pseudomonas stutzeri A1501 5097711 YP_001172154.1 CDS PST_1627 NC_009434.1 1741960 1742562 R hypothetical protein complement(1741960..1742562) Pseudomonas stutzeri A1501 5097712 YP_001172155.1 CDS PST_1628 NC_009434.1 1742920 1743342 R Code: S; COG: COG4704; hypothetical protein complement(1742920..1743342) Pseudomonas stutzeri A1501 5097713 YP_001172156.1 CDS katG NC_009434.1 1743696 1745927 D Code: P; COG: COG0376; catalase/peroxidase HPI 1743696..1745927 Pseudomonas stutzeri A1501 5097714 YP_001172157.1 CDS PST_1630 NC_009434.1 1746069 1746812 D Code: QR; COG: COG0500; SAM-dependent methyltransferase 1746069..1746812 Pseudomonas stutzeri A1501 5097715 YP_001172158.1 CDS PST_1631 NC_009434.1 1746837 1747532 R acetyltransferase complement(1746837..1747532) Pseudomonas stutzeri A1501 5097716 YP_001172159.1 CDS PST_1632 NC_009434.1 1748680 1749435 D Code: K; COG: COG0583; LysR family transcriptional regulator 1748680..1749435 Pseudomonas stutzeri A1501 5097717 YP_001172160.1 CDS PST_1633 NC_009434.1 1749562 1750458 R DNA topoisomerase I: restriction endonuclease complement(1749562..1750458) Pseudomonas stutzeri A1501 5097718 YP_001172161.1 CDS PST_1634 NC_009434.1 1751351 1751794 R hypothetical protein complement(1751351..1751794) Pseudomonas stutzeri A1501 5097719 YP_001172162.1 CDS PST_1635 NC_009434.1 1751907 1752623 R hypothetical protein complement(1751907..1752623) Pseudomonas stutzeri A1501 5097720 YP_001172163.1 CDS nrdB NC_009434.1 1752789 1754036 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(1752789..1754036) Pseudomonas stutzeri A1501 5097721 YP_001172164.1 CDS nrdA NC_009434.1 1754335 1757220 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(1754335..1757220) Pseudomonas stutzeri A1501 5097722 YP_001172165.1 CDS PST_1638 NC_009434.1 1757922 1758638 D Code: TK; COG: COG0745; two-component response regulator 1757922..1758638 Pseudomonas stutzeri A1501 5097723 YP_001172166.1 CDS PST_1639 NC_009434.1 1758650 1760251 D Code: T; COG: COG0642; sensor histidine kinase 1758650..1760251 Pseudomonas stutzeri A1501 5097724 YP_001172167.1 CDS fadE NC_009434.1 1760377 1762821 R functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase complement(1760377..1762821) Pseudomonas stutzeri A1501 5097725 YP_001172168.1 CDS PST_1641 NC_009434.1 1762934 1764073 R Code: M; COG: COG0668; hypothetical protein complement(1762934..1764073) Pseudomonas stutzeri A1501 5097726 YP_001172169.1 CDS PST_1642 NC_009434.1 1764200 1764556 R Code: P; COG: COG0607; rhodanese domain-containing protein complement(1764200..1764556) Pseudomonas stutzeri A1501 5097727 YP_001172170.1 CDS PST_1643 NC_009434.1 1764698 1764928 R hypothetical protein complement(1764698..1764928) Pseudomonas stutzeri A1501 5097728 YP_001172171.1 CDS PST_1644 NC_009434.1 1765018 1765428 D hypothetical protein 1765018..1765428 Pseudomonas stutzeri A1501 5097729 YP_001172172.1 CDS PST_1645 NC_009434.1 1765449 1765877 R Code: S; COG: COG5579; hypothetical protein complement(1765449..1765877) Pseudomonas stutzeri A1501 5097730 YP_001172173.1 CDS PST_1647 NC_009434.1 1766310 1767638 D Code: T; COG: COG2206; hypothetical protein 1766310..1767638 Pseudomonas stutzeri A1501 5097732 YP_001172174.1 CDS PST_1648 NC_009434.1 1767768 1768457 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1767768..1768457 Pseudomonas stutzeri A1501 5097733 YP_001172175.1 CDS argD NC_009434.1 1768599 1769819 D DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 1768599..1769819 Pseudomonas stutzeri A1501 5097734 YP_001172176.1 CDS PST_1650 NC_009434.1 1769876 1770157 D type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 1769876..1770157 Pseudomonas stutzeri A1501 5097735 YP_001172177.1 CDS astE NC_009434.1 1770170 1771168 D catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 1770170..1771168 Pseudomonas stutzeri A1501 5097736 YP_001172178.1 CDS PST_1652 NC_009434.1 1771359 1772183 D Code: V; COG: COG1131; ABC transporter ATP-binding protein 1771359..1772183 Pseudomonas stutzeri A1501 5097737 YP_001172179.1 CDS PST_1653 NC_009434.1 1772180 1772959 D Code: V; COG: COG0842; ABC transporter permease 1772180..1772959 Pseudomonas stutzeri A1501 5097738 YP_001172180.1 CDS queF NC_009434.1 1772987 1773883 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1772987..1773883 Pseudomonas stutzeri A1501 5097739 YP_001172181.1 CDS PST_1655 NC_009434.1 1773923 1774189 R chromosome segregation ATPase complement(1773923..1774189) Pseudomonas stutzeri A1501 5097740 YP_001172182.1 CDS vacJ NC_009434.1 1774420 1775121 D Code: M; COG: COG2853; VacJ-like lipoprotein 1774420..1775121 Pseudomonas stutzeri A1501 5097741 YP_001172183.1 CDS PST_1657 NC_009434.1 1775161 1775460 R hypothetical protein complement(1775161..1775460) Pseudomonas stutzeri A1501 5097742 YP_001172184.1 CDS PST_1658 NC_009434.1 1775576 1776838 D two-component response regulator 1775576..1776838 Pseudomonas stutzeri A1501 5097743 YP_001172185.1 CDS PST_1659 NC_009434.1 1776835 1777317 D Code: T; COG: COG1366; anti-anti-sigma factor 1776835..1777317 Pseudomonas stutzeri A1501 5097744 YP_001172186.1 CDS tal NC_009434.1 1777325 1778251 R Code: G; COG: COG0176; transaldolase B complement(1777325..1778251) Pseudomonas stutzeri A1501 5097745 YP_001172187.1 CDS PST_1661 NC_009434.1 1778383 1779387 R Code: J; COG: COG0042; tRNA-dihydrouridine synthase A complement(1778383..1779387) Pseudomonas stutzeri A1501 5097746 YP_001172188.1 CDS PST_1662 NC_009434.1 1779620 1780942 R Code: G; COG: COG1593; TRAP C4-dicarboxylate transport system permease complement(1779620..1780942) Pseudomonas stutzeri A1501 5097747 YP_001172189.1 CDS PST_1663 NC_009434.1 1780939 1781466 R hypothetical protein complement(1780939..1781466) Pseudomonas stutzeri A1501 5097748 YP_001172190.1 CDS PST_1664 NC_009434.1 1781513 1782892 R Code: G; COG: COG1638; TRAP dicarboxylate family transporter subunit DctP complement(1781513..1782892) Pseudomonas stutzeri A1501 5097749 YP_001172191.1 CDS PST_1665 NC_009434.1 1782916 1784595 R tannase complement(1782916..1784595) Pseudomonas stutzeri A1501 5097750 YP_001172192.1 CDS benR NC_009434.1 1784916 1785869 D Code: K; COG: COG2207; benABC operon transcriptional activator BenR 1784916..1785869 Pseudomonas stutzeri A1501 5097751 YP_001172193.1 CDS benA NC_009434.1 1786195 1787445 D Code: PR; COG: COG4638; benzoate dioxygenase subunit alpha 1786195..1787445 Pseudomonas stutzeri A1501 5097752 YP_001172194.1 CDS benB NC_009434.1 1787448 1787936 D Code: Q; COG: COG5517; benzoate dioxygenase subunit beta 1787448..1787936 Pseudomonas stutzeri A1501 5097753 YP_001172195.1 CDS benC NC_009434.1 1787947 1788957 D Code: HC; COG: COG0543; benzoate dioxygenase, ferredoxin reductase component 1787947..1788957 Pseudomonas stutzeri A1501 5097754 YP_001172196.1 CDS benD NC_009434.1 1789029 1789805 D catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 1789029..1789805 Pseudomonas stutzeri A1501 5097755 YP_001172197.1 CDS benK NC_009434.1 1789913 1791259 D Code: GEPR; COG: COG0477; benzoate MFS transporter BenK 1789913..1791259 Pseudomonas stutzeri A1501 5097756 YP_001172198.1 CDS catB NC_009434.1 1791288 1792409 D Code: MR; COG: COG4948; muconate cycloisomerase 1791288..1792409 Pseudomonas stutzeri A1501 5097757 YP_001172199.1 CDS catC NC_009434.1 1792424 1792714 D Code: Q; COG: COG4829; muconolactone isomerase 1792424..1792714 Pseudomonas stutzeri A1501 5097758 YP_001172200.1 CDS catA NC_009434.1 1792873 1793724 D Code: Q; COG: COG3485; catechol 1,2-dioxygenase 1792873..1793724 Pseudomonas stutzeri A1501 5097759 YP_001172201.1 CDS benE NC_009434.1 1793852 1795075 D Code: Q; COG: COG3135; benzoate transport protein 1793852..1795075 Pseudomonas stutzeri A1501 5097760 YP_001172202.1 CDS benF NC_009434.1 1795183 1796445 D benzoate-specific porin 1795183..1796445 Pseudomonas stutzeri A1501 5097761 YP_001172203.1 CDS PST_1681 NC_009434.1 1803103 1805394 R sensor/response regulator hybrid complement(1803103..1805394) Pseudomonas stutzeri A1501 5097766 YP_001172204.1 CDS lpd3 NC_009434.1 1805859 1807979 D Code: C; COG: COG1249; dihydrolipoamide dehydrogenase 3 1805859..1807979 Pseudomonas stutzeri A1501 5097767 YP_001172205.1 CDS fumC-2 NC_009434.1 1808177 1809571 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(1808177..1809571) Pseudomonas stutzeri A1501 5097768 YP_001172206.1 CDS PST_1684 NC_009434.1 1809647 1810225 D Code: S; COG: COG3184; hypothetical protein 1809647..1810225 Pseudomonas stutzeri A1501 5097769 YP_001172207.1 CDS PST_1685 NC_009434.1 1810648 1811589 D Code: R; COG: COG1054; hypothetical protein 1810648..1811589 Pseudomonas stutzeri A1501 5097770 YP_001172208.1 CDS PST_1686 NC_009434.1 1811673 1812272 D Code: O; COG: COG3531; protein-disulfide isomerase 1811673..1812272 Pseudomonas stutzeri A1501 5097771 YP_001172209.1 CDS PST_1687 NC_009434.1 1812265 1814043 D Code: V; COG: COG1132; ABC transporter ATP-binding protein/permease 1812265..1814043 Pseudomonas stutzeri A1501 5097772 YP_001172210.1 CDS PST_1688 NC_009434.1 1814215 1816167 D Code: NT; COG: COG0840; methyl-accepting chemotaxis transducer 1814215..1816167 Pseudomonas stutzeri A1501 5097773 YP_001172211.1 CDS PST_1689 NC_009434.1 1816204 1817205 R Code: R; COG: COG1988; integral membrane protein complement(1816204..1817205) Pseudomonas stutzeri A1501 5097774 YP_001172212.1 CDS PST_1690 NC_009434.1 1817254 1817802 D Code: J; COG: COG1186; peptidyl-tRNA hydrolase domain-containing protein 1817254..1817802 Pseudomonas stutzeri A1501 5097775 YP_001172213.1 CDS PST_1691 NC_009434.1 1817805 1819112 R Code: GEPR; COG: COG0477; major facilitator family transporter complement(1817805..1819112) Pseudomonas stutzeri A1501 5097776 YP_001172214.1 CDS PST_1692 NC_009434.1 1819277 1820602 R hypothetical protein complement(1819277..1820602) Pseudomonas stutzeri A1501 5097777 YP_001172215.1 CDS PST_1693 NC_009434.1 1821530 1822513 D Code: S; COG: COG3777; hypothetical protein 1821530..1822513 Pseudomonas stutzeri A1501 5097778 YP_001172216.1 CDS PST_1694 NC_009434.1 1822584 1823747 D Code: I; COG: COG1960; acyl-CoA dehydrogenase 1822584..1823747 Pseudomonas stutzeri A1501 5097779 YP_001172217.1 CDS PST_1695 NC_009434.1 1823861 1824265 D Code: E; COG: COG0346; ring-cleaving dioxygenase 1823861..1824265 Pseudomonas stutzeri A1501 5097780 YP_001172218.1 CDS PST_1696 NC_009434.1 1824262 1825614 D Code: R; COG: COG2079; hypothetical protein 1824262..1825614 Pseudomonas stutzeri A1501 5097781 YP_001172219.1 CDS PST_1697 NC_009434.1 1825628 1826950 D Code: C; COG: COG1804; CAIB/BAIF family protein 1825628..1826950 Pseudomonas stutzeri A1501 5097782 YP_001172220.1 CDS PST_1698 NC_009434.1 1826971 1827798 D Code: G; COG: COG2301; citrate lyase subunit beta 1826971..1827798 Pseudomonas stutzeri A1501 5097783 YP_001172221.1 CDS PST_1699 NC_009434.1 1827808 1828842 D Code: G; COG: COG1638; C4-dicarboxylate-binding periplasmic protein 1827808..1828842 Pseudomonas stutzeri A1501 5097784 YP_001172222.1 CDS PST_1700 NC_009434.1 1828923 1829183 D hypothetical protein 1828923..1829183 Pseudomonas stutzeri A1501 5097785 YP_001172223.1 CDS PST_1701 NC_009434.1 1829233 1829655 D hypothetical protein 1829233..1829655 Pseudomonas stutzeri A1501 5097786 YP_001172224.1 CDS PST_1702 NC_009434.1 1830548 1831348 R Code: L; COG: COG2801; ISxac2 transposase complement(1830548..1831348) Pseudomonas stutzeri A1501 5097787 YP_001172225.1 CDS PST_1703 NC_009434.1 1831369 1831635 R Code: L; COG: COG2801; ISSod2, transposase OrfA complement(1831369..1831635) Pseudomonas stutzeri A1501 5097788 YP_001172226.1 CDS PST_1704 NC_009434.1 1831696 1832724 D Code: L; COG: COG3344; reverse transcriptase 1831696..1832724 Pseudomonas stutzeri A1501 5097789 YP_001172227.1 CDS PST_1705 NC_009434.1 1832721 1833254 D transposase 1832721..1833254 Pseudomonas stutzeri A1501 5097790 YP_001172228.1 CDS PST_1706 NC_009434.1 1833654 1835270 R Code: R; COG: COG4172; peptide ABC transporter, ATP-binding protein complement(1833654..1835270) Pseudomonas stutzeri A1501 5097791 YP_001172229.1 CDS PST_1707 NC_009434.1 1835267 1836292 R Code: R; COG: COG4239; peptide ABC transporter, permease protein complement(1835267..1836292) Pseudomonas stutzeri A1501 5097792 YP_001172230.1 CDS PST_1708 NC_009434.1 1836292 1837362 R Code: R; COG: COG4174; peptide ABC transporter, permease protein complement(1836292..1837362) Pseudomonas stutzeri A1501 5097793 YP_001172231.1 CDS PST_1709 NC_009434.1 1837359 1839413 R Code: E; COG: COG4166; peptide ABC transporter, periplasmic peptide-binding protein complement(1837359..1839413) Pseudomonas stutzeri A1501 5097794 YP_001172232.1 CDS PST_1710 NC_009434.1 1839349 1842048 R Code: P; COG: COG1629; TonB-dependent receptor complement(1839349..1842048) Pseudomonas stutzeri A1501 5097795 YP_001172233.1 CDS exbD1 NC_009434.1 1842197 1842598 R Code: U; COG: COG0848; TonB system transport protein complement(1842197..1842598) Pseudomonas stutzeri A1501 5097796 YP_001172234.1 CDS exbB1 NC_009434.1 1842600 1843220 R Code: U; COG: COG0811; TonB system transport protein ExbB complement(1842600..1843220) Pseudomonas stutzeri A1501 5097797 YP_001172235.1 CDS PST_1713 NC_009434.1 1843342 1844199 R Code: M; COG: COG0810; TonB domain-containing protein complement(1843342..1844199) Pseudomonas stutzeri A1501 5097798 YP_001172236.1 CDS PST_1714 NC_009434.1 1844792 1846141 R Code: R; COG: COG0312; Zn-dependent protease complement(1844792..1846141) Pseudomonas stutzeri A1501 5097799 YP_001172237.1 CDS PST_1715 NC_009434.1 1846138 1847583 R Code: R; COG: COG0312; TldD/PmbA family protein complement(1846138..1847583) Pseudomonas stutzeri A1501 5097800 YP_001172238.1 CDS mvaB NC_009434.1 1847992 1849008 R Code: E; COG: COG0119; hydroxymethylglutaryl-CoA lyase complement(1847992..1849008) Pseudomonas stutzeri A1501 5097801 YP_001172239.1 CDS PST_1717 NC_009434.1 1849021 1850223 R Code: C; COG: COG1804; CAIB/BAIF family protein complement(1849021..1850223) Pseudomonas stutzeri A1501 5097802 YP_001172240.1 CDS PST_1718 NC_009434.1 1850400 1851083 D Code: K; COG: COG0583; LysR family transcriptional regulator 1850400..1851083 Pseudomonas stutzeri A1501 5097803 YP_001172241.1 CDS PST_1719 NC_009434.1 1851097 1851300 D hypothetical protein 1851097..1851300 Pseudomonas stutzeri A1501 5097804 YP_001172242.1 CDS PST_1720 NC_009434.1 1851446 1852444 D Code: G; COG: COG1638; c4-dicarboxylate-binding protein 1851446..1852444 Pseudomonas stutzeri A1501 5097805 YP_001172243.1 CDS acsA NC_009434.1 1854173 1856128 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1854173..1856128 Pseudomonas stutzeri A1501 5097807 YP_001172244.1 CDS PST_1724 NC_009434.1 1856230 1856589 R hypothetical protein complement(1856230..1856589) Pseudomonas stutzeri A1501 5097808 YP_001172245.1 CDS PST_1725 NC_009434.1 1856677 1858629 R Code: E; COG: COG1770; oligopeptidase complement(1856677..1858629) Pseudomonas stutzeri A1501 5097809 YP_001172246.1 CDS fadB NC_009434.1 1859143 1861290 D includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 1859143..1861290 Pseudomonas stutzeri A1501 5097810 YP_001172247.1 CDS fadA NC_009434.1 1861309 1862484 D FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 1861309..1862484 Pseudomonas stutzeri A1501 5097811 YP_001172248.1 CDS PST_1728 NC_009434.1 1862557 1862853 D Code: S; COG: COG4728; hypothetical protein 1862557..1862853 Pseudomonas stutzeri A1501 5097812 YP_001172249.1 CDS topA NC_009434.1 1863140 1865743 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1863140..1865743 Pseudomonas stutzeri A1501 5097813 YP_001172250.1 CDS PST_1730 NC_009434.1 1865879 1866397 D hypothetical protein 1865879..1866397 Pseudomonas stutzeri A1501 5097814 YP_001172251.1 CDS PST_1731 NC_009434.1 1866412 1867251 R Code: GER; COG: COG0697; hypothetical protein complement(1866412..1867251) Pseudomonas stutzeri A1501 5097815 YP_001172252.1 CDS PST_1732 NC_009434.1 1867457 1867693 D hypothetical protein 1867457..1867693 Pseudomonas stutzeri A1501 5097816 YP_001172253.1 CDS PST_1733 NC_009434.1 1867760 1868239 R Code: D; COG: COG5404; cell division inhibitor-related protein complement(1867760..1868239) Pseudomonas stutzeri A1501 5097817 YP_001172254.1 CDS lexA-2 NC_009434.1 1868250 1868687 R Code: KT; COG: COG1974; LexA repressor complement(1868250..1868687) Pseudomonas stutzeri A1501 5097818 YP_001172255.1 CDS psrA NC_009434.1 1869059 1869766 D Code: K; COG: COG1309; transcriptional regulator PsrA 1869059..1869766 Pseudomonas stutzeri A1501 5097819 YP_001172256.1 CDS PST_1736 NC_009434.1 1869806 1870330 D hypothetical protein 1869806..1870330 Pseudomonas stutzeri A1501 5097820 YP_001172257.1 CDS nagZ NC_009434.1 1870546 1871343 D hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 1870546..1871343 Pseudomonas stutzeri A1501 5097821 YP_001172258.1 CDS PST_1738 NC_009434.1 1871368 1872105 D Catalyzes the phosphorolytic cleavage of 6-oxopurine nucleosides; 5'-methylthioadenosine phosphorylase 1871368..1872105 Pseudomonas stutzeri A1501 5097822 YP_001172259.1 CDS PST_1739 NC_009434.1 1872252 1872749 D Code: S; COG: COG5608; putative lipoprotein 1872252..1872749 Pseudomonas stutzeri A1501 5097823 YP_001172260.1 CDS PST_1740 NC_009434.1 1872953 1873414 D hypothetical protein 1872953..1873414 Pseudomonas stutzeri A1501 5097824 YP_001172261.1 CDS PST_1741 NC_009434.1 1873485 1876022 D Code: R; COG: COG2366; penicillin amidase 1873485..1876022 Pseudomonas stutzeri A1501 5097825 YP_001172262.1 CDS PST_1742 NC_009434.1 1876041 1876748 R Code: S; COG: COG1720; hypothetical protein complement(1876041..1876748) Pseudomonas stutzeri A1501 5097826 YP_001172263.1 CDS PST_1743 NC_009434.1 1876859 1878067 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1876859..1878067) Pseudomonas stutzeri A1501 5097827 YP_001172264.1 CDS PST_1744 NC_009434.1 1878498 1880564 D proton-motive-force-driven choline transporter; choline transport protein BetT 1878498..1880564 Pseudomonas stutzeri A1501 5097828 YP_001172265.1 CDS betB NC_009434.1 1880657 1882129 D catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 1880657..1882129 Pseudomonas stutzeri A1501 5097829 YP_001172266.1 CDS betA NC_009434.1 1882145 1883818 D catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 1882145..1883818 Pseudomonas stutzeri A1501 5097830 YP_001172267.1 CDS rimO NC_009434.1 1883925 1885307 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase complement(1883925..1885307) Pseudomonas stutzeri A1501 5097831 YP_001172268.1 CDS PST_1748 NC_009434.1 1885333 1886400 R Code: I; COG: COG1835; acetyltransferase complement(1885333..1886400) Pseudomonas stutzeri A1501 5097832 YP_001172269.1 CDS PST_1749 NC_009434.1 1886423 1887496 R glycosyl transferase family protein complement(1886423..1887496) Pseudomonas stutzeri A1501 5097833 YP_001172270.1 CDS PST_1750 NC_009434.1 1887743 1888084 R hypothetical protein complement(1887743..1888084) Pseudomonas stutzeri A1501 5097834 YP_001172271.1 CDS PST_1751 NC_009434.1 1888130 1889332 R Code: M; COG: COG0438; glycoside hydrolase family protein complement(1888130..1889332) Pseudomonas stutzeri A1501 5097835 YP_001172272.1 CDS PST_1752 NC_009434.1 1889392 1890438 R hypothetical protein complement(1889392..1890438) Pseudomonas stutzeri A1501 5097836 YP_001172273.1 CDS PST_1753 NC_009434.1 1890494 1891600 R Code: M; COG: COG0438; glycoside hydrolase family protein complement(1890494..1891600) Pseudomonas stutzeri A1501 5097837 YP_001172274.1 CDS PST_1754 NC_009434.1 1891779 1893095 R hypothetical protein complement(1891779..1893095) Pseudomonas stutzeri A1501 5097838 YP_001172275.1 CDS PST_1755 NC_009434.1 1893112 1894410 R hypothetical protein complement(1893112..1894410) Pseudomonas stutzeri A1501 5097839 YP_001172276.1 CDS PST_1756 NC_009434.1 1894304 1895614 R glycoside hydrolase family protein complement(1894304..1895614) Pseudomonas stutzeri A1501 5097840 YP_001172277.1 CDS PST_1757 NC_009434.1 1895669 1896178 R Code: K; COG: COG0250; transcriptional activator RfaH complement(1895669..1896178) Pseudomonas stutzeri A1501 5097841 YP_001172278.1 CDS PST_1758 NC_009434.1 1896230 1896952 R hypothetical protein complement(1896230..1896952) Pseudomonas stutzeri A1501 5097842 YP_001172279.1 CDS PST_1759 NC_009434.1 1896996 1899206 R Code: M; COG: COG3206; tyrosine-protein kinase complement(1896996..1899206) Pseudomonas stutzeri A1501 5097843 YP_001172280.1 CDS PST_1760 NC_009434.1 1899256 1900188 R Code: M; COG: COG0463; glycosyl transferase family protein complement(1899256..1900188) Pseudomonas stutzeri A1501 5097844 YP_001172281.1 CDS PST_1761 NC_009434.1 1900157 1901719 R polysaccharide biosynthesis protein complement(1900157..1901719) Pseudomonas stutzeri A1501 5097845 YP_001172282.1 CDS PST_1762 NC_009434.1 1901742 1902920 R Code: M; COG: COG0399; aminotransferase complement(1901742..1902920) Pseudomonas stutzeri A1501 5097846 YP_001172283.1 CDS PST_1763 NC_009434.1 1902996 1903769 R hypothetical protein complement(1902996..1903769) Pseudomonas stutzeri A1501 5097847 YP_001172284.1 CDS PST_1766 NC_009434.1 1905215 1905640 D hypothetical protein 1905215..1905640 Pseudomonas stutzeri A1501 5097850 YP_001172285.1 CDS PST_1767 NC_009434.1 1905667 1905960 D hypothetical protein 1905667..1905960 Pseudomonas stutzeri A1501 5097851 YP_001172286.1 CDS PST_1768 NC_009434.1 1906104 1907012 D Code: J; COG: COG0042; NifR3/Smm1 family protein 1906104..1907012 Pseudomonas stutzeri A1501 5097852 YP_001172287.1 CDS PST_1769 NC_009434.1 1907019 1907753 R Code: IQR; COG: COG1028; short chain dehydrogenase complement(1907019..1907753) Pseudomonas stutzeri A1501 5097853 YP_001172288.1 CDS ibpA NC_009434.1 1907895 1908341 D Code: O; COG: COG0071; heat-shock protein IbpA 1907895..1908341 Pseudomonas stutzeri A1501 5097854 YP_001172289.1 CDS PST_1771 NC_009434.1 1908393 1909265 R Code: K; COG: COG0583; LysR family transcriptional regulator complement(1908393..1909265) Pseudomonas stutzeri A1501 5097855 YP_001172290.1 CDS leuC NC_009434.1 1909414 1910841 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1909414..1910841 Pseudomonas stutzeri A1501 5097856 YP_001172291.1 CDS leuD NC_009434.1 1910853 1911500 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 1910853..1911500 Pseudomonas stutzeri A1501 5097857 YP_001172292.1 CDS leuB NC_009434.1 1911684 1912766 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1911684..1912766 Pseudomonas stutzeri A1501 5097858 YP_001172293.1 CDS asd-1 NC_009434.1 1912821 1913933 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1912821..1913933 Pseudomonas stutzeri A1501 5097859 YP_001172294.1 CDS asd-2 NC_009434.1 1914068 1915078 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1914068..1915078 Pseudomonas stutzeri A1501 5097860 YP_001172295.1 CDS PST_1777 NC_009434.1 1915223 1917967 D Code: NU; COG: COG3170; hypothetical protein 1915223..1917967 Pseudomonas stutzeri A1501 5097861 YP_001172296.1 CDS truA NC_009434.1 1917970 1918830 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1917970..1918830 Pseudomonas stutzeri A1501 5097862 YP_001172297.1 CDS trpF NC_009434.1 1918913 1919536 D catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 1918913..1919536 Pseudomonas stutzeri A1501 5097863 YP_001172298.1 CDS accD NC_009434.1 1919752 1920645 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1919752..1920645 Pseudomonas stutzeri A1501 5097864 YP_001172299.1 CDS folC NC_009434.1 1920732 1921946 D Code: H; COG: COG0285; folylpolyglutamate synthetase 1920732..1921946 Pseudomonas stutzeri A1501 5097865 YP_001172300.1 CDS PST_1782 NC_009434.1 1921930 1922556 D Code: S; COG: COG3147; hypothetical protein 1921930..1922556 Pseudomonas stutzeri A1501 5097866 YP_001172301.1 CDS PST_1783 NC_009434.1 1922598 1923200 D Code: R; COG: COG1286; CvpA family protein 1922598..1923200 Pseudomonas stutzeri A1501 5097867 YP_001172302.1 CDS purF NC_009434.1 1923272 1924777 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1923272..1924777 Pseudomonas stutzeri A1501 5097868 YP_001172303.1 CDS metZ NC_009434.1 1924819 1926030 D catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase 1924819..1926030 Pseudomonas stutzeri A1501 5097869 YP_001172304.1 CDS xcpQ NC_009434.1 1926120 1928054 R Code: NU; COG: COG1450; general secretion pathway protein D complement(1926120..1928054) Pseudomonas stutzeri A1501 5097870 YP_001172305.1 CDS xcpP NC_009434.1 1928058 1928702 R secretion protein XcpP complement(1928058..1928702) Pseudomonas stutzeri A1501 5097871 YP_001172306.1 CDS PST_1790 NC_009434.1 1929091 1929285 R hypothetical protein complement(1929091..1929285) Pseudomonas stutzeri A1501 5097874 YP_001172307.1 CDS soxR NC_009434.1 1929282 1929758 R Code: K; COG: COG0789; transcriptional regulator SoxR complement(1929282..1929758) Pseudomonas stutzeri A1501 5097875 YP_001172308.1 CDS PST_1792 NC_009434.1 1929885 1930481 R Code: E; COG: COG1280; amino acid transporter LysE complement(1929885..1930481) Pseudomonas stutzeri A1501 5097876 YP_001172309.1 CDS PST_1793 NC_009434.1 1930650 1931345 R hypothetical protein complement(1930650..1931345) Pseudomonas stutzeri A1501 5097877 YP_001172310.1 CDS PST_1794 NC_009434.1 1931625 1931939 R Code: S; COG: COG4744; hypothetical protein complement(1931625..1931939) Pseudomonas stutzeri A1501 5097878 YP_001172311.1 CDS PST_1795 NC_009434.1 1931939 1932484 R Code: U; COG: COG0811; hypothetical protein complement(1931939..1932484) Pseudomonas stutzeri A1501 5097879 YP_001172312.1 CDS cobN NC_009434.1 1932435 1936112 R with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN complement(1932435..1936112) Pseudomonas stutzeri A1501 5097880 YP_001172313.1 CDS PST_1797 NC_009434.1 1936306 1938261 R Code: P; COG: COG4771; colicin I receptor complement(1936306..1938261) Pseudomonas stutzeri A1501 5097881 YP_001172314.1 CDS rpmE2 NC_009434.1 1938351 1938608 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(1938351..1938608) Pseudomonas stutzeri A1501 5097882 YP_001172315.1 CDS ltaA NC_009434.1 1938937 1939983 D Code: E; COG: COG2008; low specificity l-threonine aldolase 1938937..1939983 Pseudomonas stutzeri A1501 5097883 YP_001172316.1 CDS PST_1800 NC_009434.1 1940108 1941016 R Code: K; COG: COG0583; transcriptional regulator complement(1940108..1941016) Pseudomonas stutzeri A1501 5097884 YP_001172317.1 CDS PST_1801 NC_009434.1 1941118 1941744 D stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 1941118..1941744 Pseudomonas stutzeri A1501 5097885 YP_001172318.1 CDS PST_1802 NC_009434.1 1941741 1942919 D Code: GEPR; COG: COG0477; MFS family transporter 1941741..1942919 Pseudomonas stutzeri A1501 5097886 YP_001172319.1 CDS PST_1803 NC_009434.1 1942934 1943701 R Code: G; COG: COG2513; carboxyvinyl-carboxyphosphonate phosphorylmutase complement(1942934..1943701) Pseudomonas stutzeri A1501 5097887 YP_001172320.1 CDS PST_1804 NC_009434.1 1944035 1946161 D sensory box/GGDEF family protein 1944035..1946161 Pseudomonas stutzeri A1501 5097888 YP_001172321.1 CDS PST_1805 NC_009434.1 1946170 1946502 R hypothetical protein complement(1946170..1946502) Pseudomonas stutzeri A1501 5097889 YP_001172322.1 CDS PST_1806 NC_009434.1 1946512 1947555 R Code: E; COG: COG3227; thermolysin metallopeptidase complement(1946512..1947555) Pseudomonas stutzeri A1501 5097890 YP_001172323.1 CDS cydA2 NC_009434.1 1947755 1949194 D Code: C; COG: COG1271; cytochrome d ubiquinol oxidase, subunit I 1947755..1949194 Pseudomonas stutzeri A1501 5097891 YP_001172324.1 CDS cydB2 NC_009434.1 1949198 1950205 D Code: C; COG: COG1294; cytochrome d ubiquinol oxidase, subunit II 1949198..1950205 Pseudomonas stutzeri A1501 5097892 YP_001172325.1 CDS PST_1809 NC_009434.1 1950205 1950372 D hypothetical protein 1950205..1950372 Pseudomonas stutzeri A1501 5097893 YP_001172326.1 CDS PST_1810 NC_009434.1 1950639 1951676 R Code: K; COG: COG2207; AraC family transcriptional regulator complement(1950639..1951676) Pseudomonas stutzeri A1501 5097894 YP_001172327.1 CDS PST_1811 NC_009434.1 1951673 1952686 R Code: R; COG: COG0388; carbon-nitrogen family hydrolase complement(1951673..1952686) Pseudomonas stutzeri A1501 5097895 YP_001172328.1 CDS fadH1 NC_009434.1 1952757 1954904 D 2,4-dienoyl-CoA reductase FadH 1952757..1954904 Pseudomonas stutzeri A1501 5097896 YP_001172329.1 CDS PST_1813 NC_009434.1 1954937 1955359 D hypothetical protein 1954937..1955359 Pseudomonas stutzeri A1501 5097897 YP_001172330.1 CDS PST_1814 NC_009434.1 1955565 1956905 D chromosome segregation ATPase 1955565..1956905 Pseudomonas stutzeri A1501 5097898 YP_001172331.1 CDS PST_1815 NC_009434.1 1956914 1957861 D Code: E; COG: COG2515; 1-aminocyclopropane-1-carboxylate deaminase 1956914..1957861 Pseudomonas stutzeri A1501 5097899 YP_001172332.1 CDS PST_1816 NC_009434.1 1957999 1958982 D cAMP-binding protein 1957999..1958982 Pseudomonas stutzeri A1501 5097900 YP_001172333.1 CDS PST_1817 NC_009434.1 1958993 1960387 R Code: V; COG: COG0534; transporter complement(1958993..1960387) Pseudomonas stutzeri A1501 5097901 YP_001172334.1 CDS pdxB NC_009434.1 1960509 1961654 D Required for the de novo synthesis of pyroxidine via the pdxA branch; catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate; erythronate-4-phosphate dehydrogenase 1960509..1961654 Pseudomonas stutzeri A1501 5097902 YP_001172335.1 CDS PST_1819 NC_009434.1 1962769 1964508 D Code: L; COG: COG3344; group II intron-encoding maturase 1962769..1964508 Pseudomonas stutzeri A1501 5097903 YP_001172336.1 CDS dnaX NC_009434.1 1964616 1966679 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1964616..1966679 Pseudomonas stutzeri A1501 5097904 YP_001172337.1 CDS PST_1821 NC_009434.1 1966744 1967025 D Code: S; COG: COG0718; hypothetical protein 1966744..1967025 Pseudomonas stutzeri A1501 5097905 YP_001172338.1 CDS recR NC_009434.1 1967106 1967705 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1967106..1967705 Pseudomonas stutzeri A1501 5097906 YP_001172339.1 CDS PST_1823 NC_009434.1 1967809 1968840 D hypothetical protein 1967809..1968840 Pseudomonas stutzeri A1501 5097907 YP_001172340.1 CDS PST_1824 NC_009434.1 1968931 1969689 D Code: P; COG: COG1116; ABC transporter ATP-binding protein 1968931..1969689 Pseudomonas stutzeri A1501 5097908 YP_001172341.1 CDS PST_1825 NC_009434.1 1969686 1970459 D Code: P; COG: COG0600; taurine ABC transporter permease 1969686..1970459 Pseudomonas stutzeri A1501 5097909 YP_001172342.1 CDS PST_1826 NC_009434.1 1970470 1971171 D amino acid ABC transporter, periplasmic amino acid-binding protein 1970470..1971171 Pseudomonas stutzeri A1501 5097910 YP_001172343.1 CDS PST_1827 NC_009434.1 1971213 1971821 R Code: R; COG: COG1999; Sco1/SenC family protein complement(1971213..1971821) Pseudomonas stutzeri A1501 5097911 YP_001172344.1 CDS apt NC_009434.1 1971860 1972408 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(1971860..1972408) Pseudomonas stutzeri A1501 5097912 YP_001172345.1 CDS anr NC_009434.1 1972435 1973169 R Code: T; COG: COG0664; transcriptional regulator Anr complement(1972435..1973169) Pseudomonas stutzeri A1501 5097913 YP_001172346.1 CDS PST_1830 NC_009434.1 1973281 1974663 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1973281..1974663) Pseudomonas stutzeri A1501 5097914 YP_001172347.1 CDS nadE NC_009434.1 1974870 1975697 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1974870..1975697 Pseudomonas stutzeri A1501 5097915 YP_001172348.1 CDS PST_1832 NC_009434.1 1975712 1976326 R Code: S; COG: COG2836; hypothetical protein complement(1975712..1976326) Pseudomonas stutzeri A1501 5097916 YP_001172349.1 CDS ccoS NC_009434.1 1976421 1976627 R Code: P; COG: COG3197; cbb3-type cytochrome oxidase maturation protein complement(1976421..1976627) Pseudomonas stutzeri A1501 5097917 YP_001172350.1 CDS PST_1834 NC_009434.1 1976720 1979140 R Code: P; COG: COG2217; cation-transporting P-type ATPase complement(1976720..1979140) Pseudomonas stutzeri A1501 5097918 YP_001172351.1 CDS PST_1835 NC_009434.1 1979148 1979552 R Code: S; COG: COG3198; hypothetical protein complement(1979148..1979552) Pseudomonas stutzeri A1501 5097919 YP_001172352.1 CDS PST_1836 NC_009434.1 1979660 1981072 R Code: C; COG: COG0348; ferredoxin complement(1979660..1981072) Pseudomonas stutzeri A1501 5097920 YP_001172353.1 CDS PST_1837 NC_009434.1 1981210 1982127 R Code: C; COG: COG2010; cytochrome c oxidase, cbb3-type subunit III complement(1981210..1982127) Pseudomonas stutzeri A1501 5097921 YP_001172354.1 CDS ccoQ-2 NC_009434.1 1982128 1982316 R Code: O; COG: COG4736; cytochrome c oxidase, cbb3-type, CcoQ subunit complement(1982128..1982316) Pseudomonas stutzeri A1501 5097922 YP_001172355.1 CDS PST_1839 NC_009434.1 1982320 1982931 R CcoO; FixO; cbb3-type cytochrome c oxidase subunit II complement(1982320..1982931) Pseudomonas stutzeri A1501 5097923 YP_001172356.1 CDS ccoN-2 NC_009434.1 1982944 1984371 R CcoN; FixN; cbb3-type cytochrome c oxidase subunit I complement(1982944..1984371) Pseudomonas stutzeri A1501 5097924 YP_001172357.1 CDS PST_1841 NC_009434.1 1984724 1985659 R Code: C; COG: COG2010; cytochrome c oxidase, cbb3-type subunit III complement(1984724..1985659) Pseudomonas stutzeri A1501 5097925 YP_001172358.1 CDS PST_1842 NC_009434.1 1985757 1986368 R CcoO; FixO; cbb3-type cytochrome c oxidase subunit II complement(1985757..1986368) Pseudomonas stutzeri A1501 5097926 YP_001172359.1 CDS ccoN-1 NC_009434.1 1986382 1987806 R Code: O; COG: COG3278; cytochrome c oxidase, cbb3-type subunit I complement(1986382..1987806) Pseudomonas stutzeri A1501 5097927 YP_001172360.1 CDS PST_1844 NC_009434.1 1987830 1988561 D Code: R; COG: COG3571; hypothetical protein 1987830..1988561 Pseudomonas stutzeri A1501 5097928 YP_001172361.1 CDS aer-2 NC_009434.1 1988602 1990170 R Code: NT; COG: COG0840; aerotaxis receptor Aer-2 complement(1988602..1990170) Pseudomonas stutzeri A1501 5097929 YP_001172362.1 CDS acnA NC_009434.1 1990520 1993195 R Code: C; COG: COG1048; aconitate hydratase 1 complement(1990520..1993195) Pseudomonas stutzeri A1501 5097930 YP_001172363.2 CDS PST_1847 NC_009434.1 1993369 1994418 D Code: R; COG: COG2933; putative RNA 2'-O-ribose methyltransferase 1993369..1994418 Pseudomonas stutzeri A1501 5097931 YP_001172364.1 CDS PST_1848 NC_009434.1 1994491 1994742 D TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 1994491..1994742 Pseudomonas stutzeri A1501 5097932 YP_001172365.1 CDS PST_1849 NC_009434.1 1994782 1996029 R hypothetical protein complement(1994782..1996029) Pseudomonas stutzeri A1501 5097933 YP_001172366.1 CDS PST_1850 NC_009434.1 1995986 1998514 R Code: C; COG: COG0843; cytochrome c oxidase subunit I complement(1995986..1998514) Pseudomonas stutzeri A1501 5097934 YP_001172367.1 CDS PST_1851 NC_009434.1 1998511 2000109 R heme/copper-type cytochrome/quinol oxidase subunit 2 complement(1998511..2000109) Pseudomonas stutzeri A1501 5097935 YP_001172368.1 CDS PST_1852 NC_009434.1 2000131 2000544 R Code: S; COG: COG1981; hypothetical protein complement(2000131..2000544) Pseudomonas stutzeri A1501 5097936 YP_001172369.1 CDS PST_1853 NC_009434.1 2000650 2001501 R Code: P; COG: COG1226; potassium channel complement(2000650..2001501) Pseudomonas stutzeri A1501 5097937 YP_001172370.1 CDS moaA2 NC_009434.1 2001691 2002686 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2001691..2002686 Pseudomonas stutzeri A1501 5097938 YP_001172371.1 CDS PST_1855 NC_009434.1 2002921 2006409 D Code: D; COG: COG1196; chromosome segregation SMC protein 2002921..2006409 Pseudomonas stutzeri A1501 5097939 YP_001172372.1 CDS zipA NC_009434.1 2006584 2007405 D interacts directly with the cell division protein ftsZ; probable receptor for the septal ring structure, may anchor it to the inner-membrane; cell division protein ZipA 2006584..2007405 Pseudomonas stutzeri A1501 5097940 YP_001172373.1 CDS ligA NC_009434.1 2007649 2010057 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 2007649..2010057 Pseudomonas stutzeri A1501 5097941 YP_001172374.1 CDS PST_1858 NC_009434.1 2010446 2010562 D hypothetical protein 2010446..2010562 Pseudomonas stutzeri A1501 5097942 YP_001172375.1 CDS PST_1859 NC_009434.1 2010559 2011404 R Code: L; COG: COG2801; IS3 family transposase complement(2010559..2011404) Pseudomonas stutzeri A1501 5097943 YP_001172376.1 CDS PST_1860 NC_009434.1 2011431 2011709 R Code: L; COG: COG2963; transposase family protein complement(2011431..2011709) Pseudomonas stutzeri A1501 5097944 YP_001172377.1 CDS PST_1861 NC_009434.1 2011779 2012546 D Code: N; COG: COG1344; putative flagellin protein 2011779..2012546 Pseudomonas stutzeri A1501 5097945 YP_001172378.1 CDS PST_1862 NC_009434.1 2012604 2012948 D Code: N; COG: COG1334; flagellin FlaG 2012604..2012948 Pseudomonas stutzeri A1501 5097946 YP_001172379.1 CDS PST_1863 NC_009434.1 2013014 2014369 D Code: N; COG: COG1345; flagellar capping protein FliD 2013014..2014369 Pseudomonas stutzeri A1501 5097947 YP_001172380.1 CDS PST_1864 NC_009434.1 2014344 2015165 R Code: L; COG: COG2801; ISPsy12, transposase OrfB complement(2014344..2015165) Pseudomonas stutzeri A1501 5097948 YP_001172381.1 CDS PST_1865 NC_009434.1 2015198 2015506 R Code: L; COG: COG2963; transposase complement(2015198..2015506) Pseudomonas stutzeri A1501 5097949 YP_001172382.1 CDS fliS NC_009434.1 2015848 2016234 D flagellin specific chaperone; flagellar protein FliS 2015848..2016234 Pseudomonas stutzeri A1501 5097950 YP_001172383.1 CDS PST_1867 NC_009434.1 2016231 2016590 D hypothetical protein 2016231..2016590 Pseudomonas stutzeri A1501 5097951 YP_001172384.1 CDS PST_1868 NC_009434.1 2016590 2017108 D hypothetical protein 2016590..2017108 Pseudomonas stutzeri A1501 5097952 YP_001172385.1 CDS PST_1869 NC_009434.1 2017092 2017511 R Code: S; COG: COG3169; hypothetical protein complement(2017092..2017511) Pseudomonas stutzeri A1501 5097953 YP_001172386.1 CDS gltA NC_009434.1 2017937 2019208 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(2017937..2019208) Pseudomonas stutzeri A1501 5097954 YP_001172387.1 CDS sdhC NC_009434.1 2019569 2019943 D Code: C; COG: COG2009; succinate dehydrogenase (C subunit) 2019569..2019943 Pseudomonas stutzeri A1501 5097955 YP_001172388.1 CDS sdhD NC_009434.1 2019937 2020305 D Code: C; COG: COG2142; succinate dehydrogenase (D subunit) 2019937..2020305 Pseudomonas stutzeri A1501 5097956 YP_001172389.1 CDS sdhA NC_009434.1 2020309 2022081 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 2020309..2022081 Pseudomonas stutzeri A1501 5097957 YP_001172390.1 CDS sdhB NC_009434.1 2022092 2022796 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2022092..2022796 Pseudomonas stutzeri A1501 5097958 YP_001172391.1 CDS sucA NC_009434.1 2023089 2025920 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 2023089..2025920 Pseudomonas stutzeri A1501 5097959 YP_001172392.1 CDS sucB NC_009434.1 2025992 2027218 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 2025992..2027218 Pseudomonas stutzeri A1501 5097960 YP_001172393.1 CDS lpdG NC_009434.1 2027314 2028750 D E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 2027314..2028750 Pseudomonas stutzeri A1501 5097961 YP_001172394.1 CDS sucC NC_009434.1 2028944 2030110 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2028944..2030110 Pseudomonas stutzeri A1501 5097962 YP_001172395.1 CDS sucD NC_009434.1 2030110 2030994 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 2030110..2030994 Pseudomonas stutzeri A1501 5097963 YP_001172396.1 CDS braB NC_009434.1 2031362 2032681 D Code: E; COG: COG1114; branched chain amino acid transporter 2031362..2032681 Pseudomonas stutzeri A1501 5097964 YP_001172397.1 CDS PST_1881 NC_009434.1 2032771 2033496 D Code: S; COG: COG3821; hypothetical protein 2032771..2033496 Pseudomonas stutzeri A1501 5097965 YP_001172398.1 CDS PST_1882 NC_009434.1 2033554 2034015 D Code: Q; COG: COG2050; hypothetical protein 2033554..2034015 Pseudomonas stutzeri A1501 5097966 YP_001172399.1 CDS PST_1883 NC_009434.1 2034012 2034455 D Code: Q; COG: COG2050; hypothetical protein 2034012..2034455 Pseudomonas stutzeri A1501 5097967 YP_001172400.1 CDS PST_1884 NC_009434.1 2034522 2035763 D major facilitator superfamily permease 2034522..2035763 Pseudomonas stutzeri A1501 5097968 YP_001172401.1 CDS htpG NC_009434.1 2035884 2037788 D molecular chaperone; heat shock protein 90 2035884..2037788 Pseudomonas stutzeri A1501 5097969 YP_001172402.1 CDS PST_1886 NC_009434.1 2037852 2038430 R Code: O; COG: COG1765; redox protein, regulator of disulfide bond formation complement(2037852..2038430) Pseudomonas stutzeri A1501 5097970 YP_001172403.1 CDS PST_1887 NC_009434.1 2038442 2039512 D 5-oxo-L-prolinase 2038442..2039512 Pseudomonas stutzeri A1501 5097971 YP_001172404.1 CDS PST_1888 NC_009434.1 2039577 2040047 D helicase subunit of the DNA excision repair complex 2039577..2040047 Pseudomonas stutzeri A1501 5097972 YP_001172405.1 CDS PST_1889 NC_009434.1 2040202 2041827 D Code: NT; COG: COG0840; methyl-accepting chemotaxis protein 2040202..2041827 Pseudomonas stutzeri A1501 5097973 YP_001172406.1 CDS PST_1890 NC_009434.1 2042033 2043565 D Code: NT; COG: COG0840; chemotaxis transducer 2042033..2043565 Pseudomonas stutzeri A1501 5097974 YP_001172407.1 CDS PST_1891 NC_009434.1 2043743 2044981 D involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 2043743..2044981 Pseudomonas stutzeri A1501 5097975 YP_001172408.1 CDS fabB NC_009434.1 2045046 2046263 R FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(2045046..2046263) Pseudomonas stutzeri A1501 5097976 YP_001172409.1 CDS fabA NC_009434.1 2046275 2046790 R catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase complement(2046275..2046790) Pseudomonas stutzeri A1501 5097977 YP_001172410.1 CDS gpsA NC_009434.1 2047190 2048233 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2047190..2048233 Pseudomonas stutzeri A1501 5097978 YP_001172411.1 CDS PST_1895 NC_009434.1 2048243 2048605 D lipase 2048243..2048605 Pseudomonas stutzeri A1501 5097979 YP_001172412.1 CDS sixA NC_009434.1 2048692 2049060 D Code: T; COG: COG2062; phosphohistidine phosphatase SixA 2048692..2049060 Pseudomonas stutzeri A1501 5097980 YP_001172413.1 CDS PST_1897 NC_009434.1 2049137 2049580 D Code: Q; COG: COG2050; 4-hydroxybenzoyl-CoA thioesterase 2049137..2049580 Pseudomonas stutzeri A1501 5097981 YP_001172414.1 CDS PST_1898 NC_009434.1 2049540 2050523 D Code: R; COG: COG0596; hydrolase 2049540..2050523 Pseudomonas stutzeri A1501 5097982 YP_001172415.1 CDS PST_1899 NC_009434.1 2050520 2051377 D Code: R; COG: COG0596; hydrolase 2050520..2051377 Pseudomonas stutzeri A1501 5097983 YP_001172416.1 CDS PST_1900 NC_009434.1 2051595 2052413 D hypothetical protein 2051595..2052413 Pseudomonas stutzeri A1501 5097984 YP_001172417.1 CDS PST_1901 NC_009434.1 2052499 2053593 D Code: R; COG: COG0628; putative lipoprotein 2052499..2053593 Pseudomonas stutzeri A1501 5097985 YP_001172418.1 CDS PST_1902 NC_009434.1 2053607 2054593 R Code: R; COG: COG1752; alpha-beta hydrolase family esterase complement(2053607..2054593) Pseudomonas stutzeri A1501 5097986 YP_001172419.1 CDS selD NC_009434.1 2054715 2055749 D catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 2054715..2055749 Pseudomonas stutzeri A1501 5097987 YP_001172420.1 CDS PST_1904 NC_009434.1 2055869 2056855 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 2055869..2056855 Pseudomonas stutzeri A1501 5097988 YP_001172421.1 CDS PST_1905 NC_009434.1 2056884 2057162 D putative lipoprotein 2056884..2057162 Pseudomonas stutzeri A1501 5097989 YP_001172422.1 CDS PST_1906 NC_009434.1 2057196 2057411 D hypothetical protein 2057196..2057411 Pseudomonas stutzeri A1501 5097990 YP_001172423.1 CDS PST_1907 NC_009434.1 2057441 2058358 D Code: R; COG: COG0714; MoxR-like protein 2057441..2058358 Pseudomonas stutzeri A1501 5097991 YP_001172424.1 CDS PST_1908 NC_009434.1 2058393 2059355 D Code: R; COG: COG1721; hypothetical protein 2058393..2059355 Pseudomonas stutzeri A1501 5097992 YP_001172425.1 CDS PST_1909 NC_009434.1 2059352 2061352 D Code: E; COG: COG1305; transglutaminase 2059352..2061352 Pseudomonas stutzeri A1501 5097993 YP_001172426.1 CDS PST_1910 NC_009434.1 2061594 2062268 D Code: I; COG: COG1946; acyl-CoA thioesterase II 2061594..2062268 Pseudomonas stutzeri A1501 5097994 YP_001172427.1 CDS PST_1911 NC_009434.1 2062329 2063441 R hypothetical protein complement(2062329..2063441) Pseudomonas stutzeri A1501 5097995 YP_001172428.1 CDS PST_1912 NC_009434.1 2063685 2064140 D hypothetical protein 2063685..2064140 Pseudomonas stutzeri A1501 5097996 YP_001172429.1 CDS PST_1913 NC_009434.1 2064201 2064638 D Code: S; COG: COG1238; hypothetical protein 2064201..2064638 Pseudomonas stutzeri A1501 5097997 YP_001172430.1 CDS PST_1914 NC_009434.1 2064706 2065764 D Code: K; COG: COG2207; AraC family transcriptional regulator 2064706..2065764 Pseudomonas stutzeri A1501 5097998 YP_001172431.1 CDS PST_1915 NC_009434.1 2065950 2066717 D Code: IQR; COG: COG1028; 3-hydroxyacyl-CoA dehydrogenase 2065950..2066717 Pseudomonas stutzeri A1501 5097999 YP_001172432.1 CDS fadAx NC_009434.1 2066804 2067913 D Code: I; COG: COG0183; 3-ketoacyl-CoA thiolase 2066804..2067913 Pseudomonas stutzeri A1501 5098000 YP_001172433.1 CDS PST_1917 NC_009434.1 2067924 2069063 D Code: I; COG: COG1960; acyl-CoA dehydrogenase 2067924..2069063 Pseudomonas stutzeri A1501 5098001 YP_001172434.1 CDS alkK-2 NC_009434.1 2069177 2070811 D Code: IQ; COG: COG0318; medium-chain-fatty-acid--CoA ligase 2069177..2070811 Pseudomonas stutzeri A1501 5098002 YP_001172435.1 CDS PST_1919 NC_009434.1 2070884 2071966 D Code: C; COG: COG1804; alpha-methylacyl-CoA racemase 2070884..2071966 Pseudomonas stutzeri A1501 5098003 YP_001172436.1 CDS PST_1920 NC_009434.1 2072245 2072511 D hypothetical protein 2072245..2072511 Pseudomonas stutzeri A1501 5098004 YP_001172437.1 CDS PST_1921 NC_009434.1 2073265 2074467 D Code: L; COG: COG3464; ISBma1, transposase 2073265..2074467 Pseudomonas stutzeri A1501 5098005 YP_001172438.1 CDS acdA NC_009434.1 2074646 2075797 R Code: I; COG: COG1960; acyl-CoA dehydrogenase complement(2074646..2075797) Pseudomonas stutzeri A1501 5098006 YP_001172439.1 CDS PST_1923 NC_009434.1 2075835 2076929 R Code: I; COG: COG1024; enoly-coenzyme A hydratase/isomerase family protein complement(2075835..2076929) Pseudomonas stutzeri A1501 5098007 YP_001172440.1 CDS mmsB NC_009434.1 2076932 2077780 R Code: I; COG: COG2084; 3-hydroxyisobutyrate dehydrogenase complement(2076932..2077780) Pseudomonas stutzeri A1501 5098008 YP_001172441.1 CDS fadB1x NC_009434.1 2077859 2078632 R Code: I; COG: COG1024; enoyl-CoA hydratase/isomerase FadB1x complement(2077859..2078632) Pseudomonas stutzeri A1501 5098009 YP_001172442.1 CDS mmsA-2 NC_009434.1 2078680 2080191 R Code: C; COG: COG1012; methylmalonate semialdehyde dehydrogenase complement(2078680..2080191) Pseudomonas stutzeri A1501 5098010 YP_001172443.1 CDS PST_1927 NC_009434.1 2080349 2081239 D Code: K; COG: COG0583; LysR family transcriptional regulator 2080349..2081239 Pseudomonas stutzeri A1501 5098011 YP_001172444.1 CDS PST_1928 NC_009434.1 2081319 2081741 D hypothetical protein 2081319..2081741 Pseudomonas stutzeri A1501 5098012 YP_001172445.1 CDS PST_1929 NC_009434.1 2081778 2084288 R Code: G; COG: COG0058; glycosyltransferase family protein complement(2081778..2084288) Pseudomonas stutzeri A1501 5098013 YP_001172446.1 CDS PST_1930 NC_009434.1 2084360 2085457 R Code: S; COG: COG3021; hypothetical protein complement(2084360..2085457) Pseudomonas stutzeri A1501 5098014 YP_001172447.1 CDS PST_1931 NC_009434.1 2085636 2088617 R Code: M; COG: COG0744; membrane carboxypeptidase complement(2085636..2088617) Pseudomonas stutzeri A1501 5098015 YP_001172448.1 CDS PST_1932 NC_009434.1 2088949 2089749 D Code: K; COG: COG2207; transcriptional regulator 2088949..2089749 Pseudomonas stutzeri A1501 5098016 YP_001172449.1 CDS PST_1933 NC_009434.1 2089881 2090579 D hypothetical protein 2089881..2090579 Pseudomonas stutzeri A1501 5098017 YP_001172450.1 CDS PST_1934 NC_009434.1 2090881 2091612 R Code: T; COG: COG3103; hypothetical protein complement(2090881..2091612) Pseudomonas stutzeri A1501 5098018 YP_001172451.1 CDS PST_1935 NC_009434.1 2092021 2094474 D sensory box histidine kinase/response regulator 2092021..2094474 Pseudomonas stutzeri A1501 5098019 YP_001172452.1 CDS PST_1936 NC_009434.1 2094597 2095925 D Code: P; COG: COG0168; putative cation transporter 2094597..2095925 Pseudomonas stutzeri A1501 5098020 YP_001172453.1 CDS PST_1937 NC_009434.1 2095972 2096619 D Code: P; COG: COG0569; putative cation transporter 2095972..2096619 Pseudomonas stutzeri A1501 5098021 YP_001172454.1 CDS PST_1938 NC_009434.1 2096739 2097128 D Code: S; COG: COG3791; hypothetical protein 2096739..2097128 Pseudomonas stutzeri A1501 5098022 YP_001172455.1 CDS PST_1939 NC_009434.1 2097132 2099396 R Code: C; COG: COG0243; molybdopterin oxidoreductase subunit alpha complement(2097132..2099396) Pseudomonas stutzeri A1501 5098023 YP_001172456.1 CDS PST_1940 NC_009434.1 2099477 2100274 R Code: C; COG: COG1526; formate dehydrogenase accessory protein FdhD complement(2099477..2100274) Pseudomonas stutzeri A1501 5098024 YP_001172457.1 CDS PST_1941 NC_009434.1 2100382 2101170 R Code: K; COG: COG0583; LysR family transcriptional regulator complement(2100382..2101170) Pseudomonas stutzeri A1501 5098025 YP_001172458.1 CDS PST_1942 NC_009434.1 2101320 2102357 R AraC family transcriptional regulator complement(2101320..2102357) Pseudomonas stutzeri A1501 5098026 YP_001172459.1 CDS PST_1943 NC_009434.1 2102365 2103279 R diguanylate cyclase complement(2102365..2103279) Pseudomonas stutzeri A1501 5098027 YP_001172460.1 CDS PST_1944 NC_009434.1 2104461 2106842 D TonB-dependent receptor 2104461..2106842 Pseudomonas stutzeri A1501 5098028 YP_001172461.1 CDS PST_1945 NC_009434.1 2106917 2108833 D Code: I; COG: COG4247; phytase domain-containing protein 2106917..2108833 Pseudomonas stutzeri A1501 5098029 YP_001172462.1 CDS tolQ-1 NC_009434.1 2108901 2109614 D Code: U; COG: COG0811; tolQ protein 2108901..2109614 Pseudomonas stutzeri A1501 5098030 YP_001172463.1 CDS tolR-1 NC_009434.1 2109626 2110090 D Code: U; COG: COG0848; tolR protein 2109626..2110090 Pseudomonas stutzeri A1501 5098031 YP_001172464.1 CDS PST_1948 NC_009434.1 2110090 2110884 D TonB domain-containing protein 2110090..2110884 Pseudomonas stutzeri A1501 5098032 YP_001172465.1 CDS uxpB NC_009434.1 2110914 2112875 D Code: R; COG: COG3211; UxpB protein 2110914..2112875 Pseudomonas stutzeri A1501 5098033 YP_001172466.1 CDS PST_1950 NC_009434.1 2112884 2115868 R sensor/response regulator hybrid complement(2112884..2115868) Pseudomonas stutzeri A1501 5098034 YP_001172467.1 CDS PST_1951 NC_009434.1 2116082 2118079 D Code: L; COG: COG0210; helicase 2116082..2118079 Pseudomonas stutzeri A1501 5098035 YP_001172468.1 CDS PST_1952 NC_009434.1 2118076 2119614 R Code: RTKL; COG: COG0515; serine/threonine-protein kinase complement(2118076..2119614) Pseudomonas stutzeri A1501 5098036 YP_001172469.1 CDS PST_1953 NC_009434.1 2119861 2120673 R Code: P; COG: COG2116; formate/nitrate transporter complement(2119861..2120673) Pseudomonas stutzeri A1501 5098037 YP_001172470.1 CDS PST_1954 NC_009434.1 2120840 2121223 R Code: PR; COG: COG2146; nitrite reductase [NAD(P)H], small subunit complement(2120840..2121223) Pseudomonas stutzeri A1501 5098038 YP_001172471.1 CDS PST_1955 NC_009434.1 2121223 2123781 R Code: C; COG: COG1251; nitrite reductase [NAD(P)H] large subunit complement(2121223..2123781) Pseudomonas stutzeri A1501 5098039 YP_001172472.1 CDS PST_1956 NC_009434.1 2124172 2124930 R Code: K; COG: COG0846; cobalamin biosynthetic protein complement(2124172..2124930) Pseudomonas stutzeri A1501 5098040 YP_001172473.1 CDS PST_1957 NC_009434.1 2125137 2126465 D Code: H; COG: COG0635; oxygen-independent coproporphyrinogen III oxidase 2125137..2126465 Pseudomonas stutzeri A1501 5098041 YP_001172474.1 CDS PST_1958 NC_009434.1 2126472 2127965 R methyl-accepting chemotaxis protein complement(2126472..2127965) Pseudomonas stutzeri A1501 5098042 YP_001172475.1 CDS PST_1959 NC_009434.1 2128017 2129282 R Code: M; COG: COG2230; cyclopropane-fatty-acyl-phospholipid synthase complement(2128017..2129282) Pseudomonas stutzeri A1501 5098043 YP_001172476.1 CDS PST_1960 NC_009434.1 2129269 2130084 R Code: S; COG: COG3496; hypothetical protein complement(2129269..2130084) Pseudomonas stutzeri A1501 5098044 YP_001172477.1 CDS PST_1961 NC_009434.1 2130081 2131328 R Code: R; COG: COG2907; amine oxidase, flavin-containing complement(2130081..2131328) Pseudomonas stutzeri A1501 5098045 YP_001172478.1 CDS PST_1962 NC_009434.1 2131331 2132098 R Code: IQR; COG: COG1028; short chain dehydrogenase/reductase family oxidoreductase complement(2131331..2132098) Pseudomonas stutzeri A1501 5098046 YP_001172479.1 CDS PST_1963 NC_009434.1 2132095 2132523 R transcriptional regulator complement(2132095..2132523) Pseudomonas stutzeri A1501 5098047 YP_001172480.1 CDS phrB NC_009434.1 2132520 2133950 R Code: L; COG: COG0415; deoxyribodipyrimidine photolyase complement(2132520..2133950) Pseudomonas stutzeri A1501 5098048 YP_001172481.1 CDS PST_1965 NC_009434.1 2133947 2134882 R Code: K; COG: COG0789; MerR family transcriptional regulator complement(2133947..2134882) Pseudomonas stutzeri A1501 5098049 YP_001172482.1 CDS PST_1966 NC_009434.1 2134885 2135895 R hypothetical protein complement(2134885..2135895) Pseudomonas stutzeri A1501 5098050 YP_001172483.1 CDS PST_1967 NC_009434.1 2136174 2137076 D Code: R; COG: COG1090; nucleoside-diphosphate sugar epimerase 2136174..2137076 Pseudomonas stutzeri A1501 5098051 YP_001172484.1 CDS hemH NC_009434.1 2137152 2138177 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 2137152..2138177 Pseudomonas stutzeri A1501 5098052 YP_001172485.1 CDS PST_1969 NC_009434.1 2138220 2140880 R sensory box protein complement(2138220..2140880) Pseudomonas stutzeri A1501 5098053 YP_001172486.1 CDS PST_1970 NC_009434.1 2141057 2141497 R sensory box protein complement(2141057..2141497) Pseudomonas stutzeri A1501 5098054 YP_001172487.1 CDS PST_1971 NC_009434.1 2141582 2142097 R putative lipoprotein complement(2141582..2142097) Pseudomonas stutzeri A1501 5098055 YP_001172488.1 CDS PST_1972 NC_009434.1 2142106 2143341 R Code: G; COG: COG2211; Na+/melibiose symporter and related transporter complement(2142106..2143341) Pseudomonas stutzeri A1501 5098056 YP_001172489.1 CDS PST_1973 NC_009434.1 2143338 2143859 R hypothetical protein complement(2143338..2143859) Pseudomonas stutzeri A1501 5098057 YP_001172490.1 CDS folX NC_009434.1 2143869 2144240 R catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase complement(2143869..2144240) Pseudomonas stutzeri A1501 5098058 YP_001172491.1 CDS folE-1 NC_009434.1 2144240 2144884 R Code: H; COG: COG0302; GTP cyclohydrolase I complement(2144240..2144884) Pseudomonas stutzeri A1501 5098059 YP_001172492.1 CDS PST_1976 NC_009434.1 2145101 2145541 R Code: S; COG: COG3011; hypothetical protein complement(2145101..2145541) Pseudomonas stutzeri A1501 5098060 YP_001172493.1 CDS PST_1977 NC_009434.1 2145634 2146581 D Code: K; COG: COG0789; MerR family transcriptional regulator 2145634..2146581 Pseudomonas stutzeri A1501 5098061 YP_001172494.1 CDS pqqF NC_009434.1 2146616 2149147 D Code: O; COG: COG1025; pyrroloquinoline quinone biosynthesis protein F 2146616..2149147 Pseudomonas stutzeri A1501 5098062 YP_001172495.1 CDS PST_1979 NC_009434.1 2149405 2150595 D outer membrane protein (porin) 2149405..2150595 Pseudomonas stutzeri A1501 5098063 YP_001172496.1 CDS PST_1980 NC_009434.1 2150946 2152073 D Code: S; COG: COG3287; hypothetical protein 2150946..2152073 Pseudomonas stutzeri A1501 5098064 YP_001172497.1 CDS PST_1981 NC_009434.1 2152003 2154642 D two-component sensor 2152003..2154642 Pseudomonas stutzeri A1501 5098065 YP_001172498.1 CDS PST_1982 NC_009434.1 2154673 2155677 R Code: O; COG: COG0435; glutathione S-transferase domain-containing protein complement(2154673..2155677) Pseudomonas stutzeri A1501 5098066 YP_001172499.1 CDS PST_1983 NC_009434.1 2155762 2156583 R Code: E; COG: COG0547; hypothetical protein complement(2155762..2156583) Pseudomonas stutzeri A1501 5098067 YP_001172500.1 CDS PST_1984 NC_009434.1 2156742 2157236 R Code: P; COG: COG2920; dissimilatory sulfite reductase (desulfoviridin) subunit gamma complement(2156742..2157236) Pseudomonas stutzeri A1501 5098068 YP_001172501.1 CDS PST_1985 NC_009434.1 2157373 2157732 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC complement(2157373..2157732) Pseudomonas stutzeri A1501 5098069 YP_001172502.1 CDS PST_1986 NC_009434.1 2157732 2158415 R hypothetical protein complement(2157732..2158415) Pseudomonas stutzeri A1501 5098070 YP_001172503.1 CDS PST_1987 NC_009434.1 2158490 2159620 D Code: GEPR; COG: COG0477; hypothetical protein 2158490..2159620 Pseudomonas stutzeri A1501 5098071 YP_001172504.1 CDS PST_1988 NC_009434.1 2159720 2160388 R Code: R; COG: COG0670; hypothetical protein complement(2159720..2160388) Pseudomonas stutzeri A1501 5098072 YP_001172505.1 CDS PST_1990 NC_009434.1 2160879 2161151 D hypothetical protein 2160879..2161151 Pseudomonas stutzeri A1501 5098074 YP_001172506.1 CDS ttgR NC_009434.1 2161140 2161781 R Code: K; COG: COG1309; transcriptional regulator TtgR complement(2161140..2161781) Pseudomonas stutzeri A1501 5098075 YP_001172507.1 CDS PST_1992 NC_009434.1 2161846 2162913 R Code: P; COG: COG0715; ABC transporter substrate-binding protein complement(2161846..2162913) Pseudomonas stutzeri A1501 5098076 YP_001172508.1 CDS PST_1993 NC_009434.1 2162929 2164293 R Code: E; COG: COG0174; glutamate--ammonia ligase complement(2162929..2164293) Pseudomonas stutzeri A1501 5098077 YP_001172509.1 CDS PST_1994 NC_009434.1 2164436 2165458 D Code: E; COG: COG2021; homoserine O-acetyltransferase 2164436..2165458 Pseudomonas stutzeri A1501 5098078 YP_001172510.1 CDS PST_1995 NC_009434.1 2166304 2167182 R Code: P; COG: COG0600; taurine ABC transporter permease complement(2166304..2167182) Pseudomonas stutzeri A1501 5098079 YP_001172511.1 CDS PST_1996 NC_009434.1 2167179 2167988 R hypothetical protein complement(2167179..2167988) Pseudomonas stutzeri A1501 5098080 YP_001172512.1 CDS PST_1997 NC_009434.1 2168038 2168697 R Code: Q; COG: COG1335; isochorismatase family protein complement(2168038..2168697) Pseudomonas stutzeri A1501 5098081 YP_001172513.1 CDS PST_1998 NC_009434.1 2168694 2169455 R Code: R; COG: COG1402; creatinine amidohydrolase subunit F complement(2168694..2169455) Pseudomonas stutzeri A1501 5098082 YP_001172514.1 CDS PST_1999 NC_009434.1 2169452 2170291 R Code: GER; COG: COG0697; DMT family permease complement(2169452..2170291) Pseudomonas stutzeri A1501 5098083 YP_001172515.1 CDS PST_2000 NC_009434.1 2170333 2171088 R Code: IQR; COG: COG1028; short chain dehydrogenase/reductase family oxidoreductase complement(2170333..2171088) Pseudomonas stutzeri A1501 5098084 YP_001172516.1 CDS PST_2001 NC_009434.1 2171088 2171876 R Code: IQR; COG: COG1028; 3-hydroxybutyrate dehydrogenase complement(2171088..2171876) Pseudomonas stutzeri A1501 5098085 YP_001172517.1 CDS PST_2002 NC_009434.1 2171878 2172900 R hypothetical protein complement(2171878..2172900) Pseudomonas stutzeri A1501 5098086 YP_001172518.1 CDS PST_2003 NC_009434.1 2172946 2173947 R Code: P; COG: COG0715; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(2172946..2173947) Pseudomonas stutzeri A1501 5098087 YP_001172519.1 CDS PST_2004 NC_009434.1 2174396 2175367 R Code: C; COG: COG0667; aldo/keto reductase family oxidoreductase complement(2174396..2175367) Pseudomonas stutzeri A1501 5098088 YP_001172520.1 CDS PST_2005 NC_009434.1 2175500 2177302 R catalyzes the hydrolysis of allophanate; allophanate hydrolase complement(2175500..2177302) Pseudomonas stutzeri A1501 5098089 YP_001172521.1 CDS PST_2008 NC_009434.1 2181189 2181824 R Code: S; COG: COG3665; hypothetical protein complement(2181189..2181824) Pseudomonas stutzeri A1501 5098091 YP_001172522.1 CDS PST_2009 NC_009434.1 2181838 2182566 R Code: S; COG: COG3665; hypothetical protein complement(2181838..2182566) Pseudomonas stutzeri A1501 5098092 YP_001172523.1 CDS PST_2010 NC_009434.1 2182568 2183455 R Code: P; COG: COG1116; ABC transporter ATP-binding protein complement(2182568..2183455) Pseudomonas stutzeri A1501 5098093 YP_001172524.1 CDS PST_2011 NC_009434.1 2183452 2184267 R Code: P; COG: COG0600; ABC transporter permease complement(2183452..2184267) Pseudomonas stutzeri A1501 5098094 YP_001172525.1 CDS PST_2012 NC_009434.1 2184689 2186104 R Code: NT; COG: COG0840; methyl-accepting chemotaxis transducer complement(2184689..2186104) Pseudomonas stutzeri A1501 5098095 YP_001172526.1 CDS mttC NC_009434.1 2186265 2187071 R Code: L; COG: COG0084; secretion protein MttC complement(2186265..2187071) Pseudomonas stutzeri A1501 5098096 YP_001172527.1 CDS PST_2014 NC_009434.1 2187244 2188659 D Code: M; COG: COG4623; glycosylase 2187244..2188659 Pseudomonas stutzeri A1501 5098097 YP_001172528.1 CDS lipH NC_009434.1 2188665 2189672 R acts as a molecular chaperone to fold and export lipase A; lipase chaperone complement(2188665..2189672) Pseudomonas stutzeri A1501 5098098 YP_001172529.1 CDS lipC NC_009434.1 2189736 2190671 R Code: R; COG: COG1075; lipase LipC complement(2189736..2190671) Pseudomonas stutzeri A1501 5098099 YP_001172530.1 CDS greB NC_009434.1 2190984 2191502 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(2190984..2191502) Pseudomonas stutzeri A1501 5098100 YP_001172531.1 CDS PST_2018 NC_009434.1 2191522 2194026 R Code: Q; COG: COG3127; permease complement(2191522..2194026) Pseudomonas stutzeri A1501 5098101 YP_001172532.1 CDS PST_2019 NC_009434.1 2194023 2194709 R Code: Q; COG: COG4181; ABC transporter ATP-binding protein complement(2194023..2194709) Pseudomonas stutzeri A1501 5098102 YP_001172533.1 CDS tesA NC_009434.1 2194721 2195326 D Code: E; COG: COG2755; acyl-CoA thioesterase 2194721..2195326 Pseudomonas stutzeri A1501 5098103 YP_001172534.1 CDS PST_2021 NC_009434.1 2195330 2196685 D Code: S; COG: COG1376; ErfK/YbiS/YcfS/YnhG family protein 2195330..2196685 Pseudomonas stutzeri A1501 5098104 YP_001172535.1 CDS oprI NC_009434.1 2196747 2197001 R outer membrane lipoprotein OprI complement(2196747..2197001) Pseudomonas stutzeri A1501 5098105 YP_001172536.1 CDS PST_2023 NC_009434.1 2197393 2197686 D acetyltransferase 2197393..2197686 Pseudomonas stutzeri A1501 5098106 YP_001172537.1 CDS aroF-1 NC_009434.1 2197718 2198794 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2197718..2198794) Pseudomonas stutzeri A1501 5098107 YP_001172538.1 CDS panE-1 NC_009434.1 2199058 2200014 D catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 2199058..2200014 Pseudomonas stutzeri A1501 5098108 YP_001172539.1 CDS cysB NC_009434.1 2200191 2201165 D LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 2200191..2201165 Pseudomonas stutzeri A1501 5098109 YP_001172540.1 CDS cysH NC_009434.1 2201234 2201968 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(2201234..2201968) Pseudomonas stutzeri A1501 5098110 YP_001172541.1 CDS thrH NC_009434.1 2202160 2202777 D catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; phosphoserine phosphatase 2202160..2202777 Pseudomonas stutzeri A1501 5098111 YP_001172542.1 CDS pabB NC_009434.1 2202818 2204164 R Code: EH; COG: COG0147; para-aminobenzoate synthase, component I complement(2202818..2204164) Pseudomonas stutzeri A1501 5098112 YP_001172543.1 CDS PST_2030 NC_009434.1 2204215 2205198 R glutathione synthase/ribosomal protein S6 modification protein complement(2204215..2205198) Pseudomonas stutzeri A1501 5098113 YP_001172544.1 CDS PST_2031 NC_009434.1 2205202 2206728 R hypothetical protein complement(2205202..2206728) Pseudomonas stutzeri A1501 5098114 YP_001172545.1 CDS PST_2032 NC_009434.1 2206734 2207270 R Code: O; COG: COG4067; hypothetical protein complement(2206734..2207270) Pseudomonas stutzeri A1501 5098115 YP_001172546.1 CDS PST_2033 NC_009434.1 2207537 2208262 D Code: K; COG: COG1802; GntR family transcriptional regulator 2207537..2208262 Pseudomonas stutzeri A1501 5098116 YP_001172547.1 CDS prpB NC_009434.1 2208259 2209146 D catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 2208259..2209146 Pseudomonas stutzeri A1501 5098117 YP_001172548.1 CDS prpC NC_009434.1 2209243 2210370 D catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 2209243..2210370 Pseudomonas stutzeri A1501 5098118 YP_001172549.1 CDS PST_2036 NC_009434.1 2210390 2213050 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2210390..2213050 Pseudomonas stutzeri A1501 5098119 YP_001172550.1 CDS PST_2037 NC_009434.1 2213069 2214352 D Code: S; COG: COG2828; hypothetical protein 2213069..2214352 Pseudomonas stutzeri A1501 5098120 YP_001172551.1 CDS PST_2038 NC_009434.1 2214459 2215277 R Code: S; COG: COG1806; hypothetical protein complement(2214459..2215277) Pseudomonas stutzeri A1501 5098121 YP_001172552.1 CDS ppsA NC_009434.1 2215516 2217801 D catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2215516..2217801 Pseudomonas stutzeri A1501 5098122 YP_001172553.1 CDS menG NC_009434.1 2217946 2218434 D regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 2217946..2218434 Pseudomonas stutzeri A1501 5098123 YP_001172554.1 CDS cmaX NC_009434.1 2218453 2219511 D Code: P; COG: COG0598; CmaX protein 2218453..2219511 Pseudomonas stutzeri A1501 5098124 YP_001172555.1 CDS crfX NC_009434.1 2219568 2219810 D CrfX protein 2219568..2219810 Pseudomonas stutzeri A1501 5098125 YP_001172556.1 CDS cmpX NC_009434.1 2219807 2220637 D Code: M; COG: COG0668; CmpX protein 2219807..2220637 Pseudomonas stutzeri A1501 5098126 YP_001172557.1 CDS sigX NC_009434.1 2220704 2221312 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas fluorescens and P. aeruginosa regulates outer membrane protein OprF expression; RNA polymerase sigma factor SigX 2220704..2221312 Pseudomonas stutzeri A1501 5098127 YP_001172558.1 CDS oprF NC_009434.1 2221451 2222398 D Code: M; COG: COG2885; outer membrane protein OprF 2221451..2222398 Pseudomonas stutzeri A1501 5098128 YP_001172559.2 CDS acnB NC_009434.1 2222615 2225224 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(2222615..2225224) Pseudomonas stutzeri A1501 5098129 YP_001172560.1 CDS PST_2047 NC_009434.1 2225584 2226108 D Code: R; COG: COG3313; Fe-S protein 2225584..2226108 Pseudomonas stutzeri A1501 5098130 YP_001172561.1 CDS PST_2048 NC_009434.1 2226147 2227007 R Code: T; COG: COG0589; universal stress protein complement(2226147..2227007) Pseudomonas stutzeri A1501 5098131 YP_001172562.1 CDS PST_2049 NC_009434.1 2227184 2227789 D Code: FJ; COG: COG4445; tRNA-(ms(2)io(6)a)-hydroxylase 2227184..2227789 Pseudomonas stutzeri A1501 5098132 YP_001172563.1 CDS lpxH NC_009434.1 2227786 2228508 R catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase complement(2227786..2228508) Pseudomonas stutzeri A1501 5098133 YP_001172564.1 CDS ppiB NC_009434.1 2228515 2229105 R Code: O; COG: COG0652; peptidyl-prolyl cis-trans isomerase B complement(2228515..2229105) Pseudomonas stutzeri A1501 5098134 YP_001172565.1 CDS glnS NC_009434.1 2229283 2230950 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2229283..2230950 Pseudomonas stutzeri A1501 5098135 YP_001172566.2 CDS cysS NC_009434.1 2230950 2232335 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2230950..2232335 Pseudomonas stutzeri A1501 5098136 YP_001172567.1 CDS folD NC_009434.1 2232393 2233247 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(2232393..2233247) Pseudomonas stutzeri A1501 5098137 YP_001172568.1 CDS PST_2058 NC_009434.1 2234096 2234803 D Code: K; COG: COG2186; transcriptional regulator 2234096..2234803 Pseudomonas stutzeri A1501 5098141 YP_001172569.1 CDS PST_2059 NC_009434.1 2234812 2235573 D Code: R; COG: COG0730; hypothetical protein 2234812..2235573 Pseudomonas stutzeri A1501 5098142 YP_001172570.1 CDS tig NC_009434.1 2235746 2237056 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2235746..2237056 Pseudomonas stutzeri A1501 5098143 YP_001172571.1 CDS clpP NC_009434.1 2237164 2237784 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2237164..2237784 Pseudomonas stutzeri A1501 5098144 YP_001172572.1 CDS clpX NC_009434.1 2237837 2239162 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2237837..2239162 Pseudomonas stutzeri A1501 5098145 YP_001172573.1 CDS lon NC_009434.1 2239295 2241691 D Code: O; COG: COG0466; ATP-dependent protease 2239295..2241691 Pseudomonas stutzeri A1501 5098146 YP_001172574.1 CDS hupB NC_009434.1 2241822 2242094 D Code: L; COG: COG0776; DNA-binding protein HU 2241822..2242094 Pseudomonas stutzeri A1501 5098147 YP_001172575.1 CDS ppiD NC_009434.1 2242300 2244156 D Code: O; COG: COG0760; peptidyl-prolyl cis-trans isomerase D 2242300..2244156 Pseudomonas stutzeri A1501 5098148 YP_001172576.1 CDS PST_2066 NC_009434.1 2244253 2245710 R phosphoserine aminotransferase complement(2244253..2245710) Pseudomonas stutzeri A1501 5098149 YP_001172577.1 CDS PST_2067 NC_009434.1 2245691 2246194 R Code: S; COG: COG3748; hypothetical protein complement(2245691..2246194) Pseudomonas stutzeri A1501 5098150 YP_001172578.1 CDS PST_2068 NC_009434.1 2246278 2247423 R Code: R; COG: COG0535; pyrroloquinoline quinone biosynthesis protein PqqE complement(2246278..2247423) Pseudomonas stutzeri A1501 5098151 YP_001172579.1 CDS PST_2069 NC_009434.1 2247392 2247685 R pyrroloquinoline quinone biosynthesis protein D complement(2247392..2247685) Pseudomonas stutzeri A1501 5098152 YP_001172580.1 CDS PST_2070 NC_009434.1 2247741 2247989 R hypothetical protein complement(2247741..2247989) Pseudomonas stutzeri A1501 5098153 YP_001172581.1 CDS PST_2071 NC_009434.1 2248226 2249746 D Code: C; COG: COG1012; aldehyde dehydrogenase 2248226..2249746 Pseudomonas stutzeri A1501 5098154 YP_001172582.1 CDS morB NC_009434.1 2249987 2251105 D Code: C; COG: COG1902; morphinone reductase 2249987..2251105 Pseudomonas stutzeri A1501 5098155 YP_001172583.1 CDS pqqB NC_009434.1 2251404 2252315 D possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 2251404..2252315 Pseudomonas stutzeri A1501 5098156 YP_001172584.1 CDS pqqC NC_009434.1 2252480 2253139 D Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 2252480..2253139 Pseudomonas stutzeri A1501 5098157 YP_001172585.1 CDS PST_2075 NC_009434.1 2253225 2253503 D with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone; pyrroloquinoline quinone biosynthesis protein PqqD 2253225..2253503 Pseudomonas stutzeri A1501 5098158 YP_001172586.1 CDS PST_2076 NC_009434.1 2253664 2254629 D Code: R; COG: COG0535; pyrroloquinoline quinone biosynthesis protein PqqE 2253664..2254629 Pseudomonas stutzeri A1501 5098159 YP_001172587.1 CDS PST_2077 NC_009434.1 2254626 2256560 D Code: E; COG: COG1506; prolyl oligopeptidase family protein 2254626..2256560 Pseudomonas stutzeri A1501 5098160 YP_001172588.1 CDS PST_2078 NC_009434.1 2256639 2257832 D Code: C; COG: COG1454; iron-containing alcohol dehydrogenase 2256639..2257832 Pseudomonas stutzeri A1501 5098161 YP_001172589.1 CDS PST_2079 NC_009434.1 2257816 2259516 D sensory box histidine kinase/response regulator 2257816..2259516 Pseudomonas stutzeri A1501 5098162 YP_001172590.1 CDS PST_2080 NC_009434.1 2259569 2259913 D hypothetical protein 2259569..2259913 Pseudomonas stutzeri A1501 5098163 YP_001172591.1 CDS PST_2081 NC_009434.1 2260004 2261257 D CzcC family heavy metal RND efflux outer membrane protein 2260004..2261257 Pseudomonas stutzeri A1501 5098164 YP_001172592.1 CDS PST_2082 NC_009434.1 2261254 2262750 D Code: M; COG: COG0845; CzcB family heavy metal RND efflux membrane fusion protein 2261254..2262750 Pseudomonas stutzeri A1501 5098165 YP_001172593.1 CDS PST_2083 NC_009434.1 2262747 2265896 D Code: P; COG: COG3696; CzcA family heavy metal RND efflux protein 2262747..2265896 Pseudomonas stutzeri A1501 5098166 YP_001172594.1 CDS PST_2084 NC_009434.1 2265882 2266658 R hypothetical protein complement(2265882..2266658) Pseudomonas stutzeri A1501 5098167 YP_001172595.1 CDS gacA NC_009434.1 2266821 2267450 D Code: TK; COG: COG2197; DNA-binding response regulator GacA 2266821..2267450 Pseudomonas stutzeri A1501 5098168 YP_001172596.1 CDS uvrC NC_009434.1 2267516 2269273 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2267516..2269273 Pseudomonas stutzeri A1501 5098169 YP_001172597.1 CDS pgsA NC_009434.1 2269251 2269865 D Code: I; COG: COG0558; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2269251..2269865 Pseudomonas stutzeri A1501 5098170 YP_001172598.1 CDS PST_2089 NC_009434.1 2270280 2270525 D hypothetical protein 2270280..2270525 Pseudomonas stutzeri A1501 5098174 YP_001172599.1 CDS PST_2091 NC_009434.1 2270526 2270708 R hypothetical protein complement(2270526..2270708) Pseudomonas stutzeri A1501 5098173 YP_001172600.1 CDS PST_2092 NC_009434.1 2270827 2271069 R Code: OC; COG: COG0526; redox-active disulfide protein complement(2270827..2271069) Pseudomonas stutzeri A1501 5098175 YP_001172601.1 CDS PST_2093 NC_009434.1 2271066 2272442 R hypothetical protein complement(2271066..2272442) Pseudomonas stutzeri A1501 5098176 YP_001172602.1 CDS PST_2094 NC_009434.1 2272521 2273603 R Code: P; COG: COG0798; putative sodium bile acid symporter family protein complement(2272521..2273603) Pseudomonas stutzeri A1501 5098177 YP_001172603.1 CDS PST_2095 NC_009434.1 2273652 2274725 R Code: P; COG: COG2072; monooxygenase complement(2273652..2274725) Pseudomonas stutzeri A1501 5098178 YP_001172604.1 CDS arsR-2 NC_009434.1 2274943 2275299 D Code: K; COG: COG0640; arsenic resistance transcriptional regulator 2274943..2275299 Pseudomonas stutzeri A1501 5098179 YP_001172605.1 CDS arsH NC_009434.1 2275339 2276052 D Code: R; COG: COG0431; arsH protein 2275339..2276052 Pseudomonas stutzeri A1501 5098180 YP_001172606.1 CDS PST_2098 NC_009434.1 2276071 2276565 D Code: T; COG: COG2453; phosphatase family protein 2276071..2276565 Pseudomonas stutzeri A1501 5098181 YP_001172607.1 CDS PST_2099 NC_009434.1 2276534 2276902 D Code: S; COG: COG1742; putative inner membrane lipoprotein 2276534..2276902 Pseudomonas stutzeri A1501 5098182 YP_001172608.1 CDS PST_2100 NC_009434.1 2276929 2277939 D catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 2276929..2277939 Pseudomonas stutzeri A1501 5098183 YP_001172609.1 CDS PST_2101 NC_009434.1 2278030 2279244 D Code: GEPR; COG: COG0477; major facilitator superfamily permease 2278030..2279244 Pseudomonas stutzeri A1501 5098184 YP_001172610.1 CDS PST_2102 NC_009434.1 2279279 2280532 R hypothetical protein complement(2279279..2280532) Pseudomonas stutzeri A1501 5098185 YP_001172611.1 CDS PST_2103 NC_009434.1 2280678 2281022 R hypothetical protein complement(2280678..2281022) Pseudomonas stutzeri A1501 5098186 YP_001172612.1 CDS PST_2104 NC_009434.1 2280991 2281689 R hypothetical protein complement(2280991..2281689) Pseudomonas stutzeri A1501 5098187 YP_001172613.1 CDS PST_2105 NC_009434.1 2281683 2282087 R hypothetical protein complement(2281683..2282087) Pseudomonas stutzeri A1501 5098188 YP_001172614.1 CDS PST_2107 NC_009434.1 2282486 2284912 R Code: KL; COG: COG1199; rad3-related DNA helicase complement(2282486..2284912) Pseudomonas stutzeri A1501 5098190 YP_001172615.1 CDS PST_2108 NC_009434.1 2284762 2286399 R hypothetical protein complement(2284762..2286399) Pseudomonas stutzeri A1501 5098191 YP_001172616.1 CDS PST_2109 NC_009434.1 2286534 2287922 R Code: H; COG: COG0635; oxygen-independent coproporphyrinogen III oxidase complement(2286534..2287922) Pseudomonas stutzeri A1501 5098192 YP_001172617.1 CDS PST_2110 NC_009434.1 2288143 2289762 R Code: NT; COG: COG0840; methyl-accepting chemotaxis protein complement(2288143..2289762) Pseudomonas stutzeri A1501 5098193 YP_001172618.1 CDS galU NC_009434.1 2290369 2291208 D Code: M; COG: COG1210; UTP--glucose-1-phosphate uridylyltransferase 2290369..2291208 Pseudomonas stutzeri A1501 5098194 YP_001172619.1 CDS PST_2112 NC_009434.1 2291243 2291665 R Code: E; COG: COG0346; ring-cleaving dioxygenase complement(2291243..2291665) Pseudomonas stutzeri A1501 5098195 YP_001172620.1 CDS gor NC_009434.1 2291737 2293095 D catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 2291737..2293095 Pseudomonas stutzeri A1501 5098196 YP_001172621.1 CDS PST_2114 NC_009434.1 2293137 2293604 R Code: S; COG: COG2847; hypothetical protein complement(2293137..2293604) Pseudomonas stutzeri A1501 5098197 YP_001172622.1 CDS PST_2115 NC_009434.1 2293742 2293963 R hypothetical protein complement(2293742..2293963) Pseudomonas stutzeri A1501 5098198 YP_001172623.1 CDS PST_2116 NC_009434.1 2293960 2294913 R Code: FE; COG: COG0462; ribose-phosphate pyrophosphokinase family protein complement(2293960..2294913) Pseudomonas stutzeri A1501 5098199 YP_001172624.1 CDS PST_2117 NC_009434.1 2294910 2295356 R hypothetical protein complement(2294910..2295356) Pseudomonas stutzeri A1501 5098200 YP_001172625.1 CDS PST_2118 NC_009434.1 2295645 2295833 R hypothetical protein complement(2295645..2295833) Pseudomonas stutzeri A1501 5098201 YP_001172626.1 CDS pobR NC_009434.1 2295923 2296762 R Code: K; COG: COG2207; transcriptional regulator PobR complement(2295923..2296762) Pseudomonas stutzeri A1501 5098202 YP_001172627.1 CDS PST_2120 NC_009434.1 2296857 2298995 D Code: S; COG: COG1289; hypothetical protein 2296857..2298995 Pseudomonas stutzeri A1501 5098203 YP_001172628.1 CDS PST_2121 NC_009434.1 2298992 2299195 D hypothetical protein 2298992..2299195 Pseudomonas stutzeri A1501 5098204 YP_001172629.1 CDS PST_2122 NC_009434.1 2299199 2300098 D Code: V; COG: COG1566; efflux transporter, membrane fusion protein 2299199..2300098 Pseudomonas stutzeri A1501 5098205 YP_001172630.1 CDS PST_2123 NC_009434.1 2300095 2301549 D Code: MU; COG: COG1538; outer membrane efflux protein 2300095..2301549 Pseudomonas stutzeri A1501 5098206 YP_001172631.1 CDS PST_2124 NC_009434.1 2301549 2302484 D Code: K; COG: COG0583; transcriptional regulator 2301549..2302484 Pseudomonas stutzeri A1501 5098207 YP_001172632.1 CDS PST_2125 NC_009434.1 2302701 2303000 D hypothetical protein 2302701..2303000 Pseudomonas stutzeri A1501 5098208 YP_001172633.1 CDS PST_2126 NC_009434.1 2303042 2304091 R hypothetical protein complement(2303042..2304091) Pseudomonas stutzeri A1501 5098209 YP_001172634.1 CDS PST_2127 NC_009434.1 2304503 2305978 D oxidoreductase 2304503..2305978 Pseudomonas stutzeri A1501 5098210 YP_001172635.1 CDS PST_2128 NC_009434.1 2306115 2307128 D Code: IQR; COG: COG1028; short chain dehydrogenase/reductase family oxidoreductase 2306115..2307128 Pseudomonas stutzeri A1501 5098211 YP_001172636.1 CDS poxB NC_009434.1 2307161 2308963 R catalyzes the formation of acetate from pyruvate; thiamine pyrophosphate protein complement(2307161..2308963) Pseudomonas stutzeri A1501 5098212 YP_001172637.1 CDS ligD NC_009434.1 2309026 2311581 R catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase complement(2309026..2311581) Pseudomonas stutzeri A1501 5098213 YP_001172638.1 CDS PST_2131 NC_009434.1 2311610 2311906 R hypothetical protein complement(2311610..2311906) Pseudomonas stutzeri A1501 5098214 YP_001172639.1 CDS PST_2132 NC_009434.1 2312089 2312310 R hypothetical protein complement(2312089..2312310) Pseudomonas stutzeri A1501 5098215 YP_001172640.1 CDS PST_2133 NC_009434.1 2312476 2312862 R hypothetical protein complement(2312476..2312862) Pseudomonas stutzeri A1501 5098216 YP_001172641.1 CDS PST_2134 NC_009434.1 2312869 2313399 R Code: S; COG: COG3685; hypothetical protein complement(2312869..2313399) Pseudomonas stutzeri A1501 5098217 YP_001172642.1 CDS PST_2135 NC_009434.1 2313601 2314713 D mechanosensitive ion channel family protein 2313601..2314713 Pseudomonas stutzeri A1501 5098218 YP_001172643.1 CDS PST_2136 NC_009434.1 2314717 2315223 R Code: R; COG: COG1546; CinA domain-containing protein complement(2314717..2315223) Pseudomonas stutzeri A1501 5098219 YP_001172644.1 CDS glgA NC_009434.1 2315258 2317069 D catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 2315258..2317069 Pseudomonas stutzeri A1501 5098220 YP_001172645.1 CDS PST_2138 NC_009434.1 2317082 2318854 D Code: G; COG: COG0296; alpha-amylase family protein 2317082..2318854 Pseudomonas stutzeri A1501 5098221 YP_001172646.1 CDS malQ NC_009434.1 2318851 2320926 D Code: G; COG: COG1640; 4-alpha-glucanotransferase 2318851..2320926 Pseudomonas stutzeri A1501 5098222 YP_001172647.1 CDS PST_2140 NC_009434.1 2320923 2323733 D Code: G; COG: COG3280; maltooligosyl trehalose synthase 2320923..2323733 Pseudomonas stutzeri A1501 5098223 YP_001172648.1 CDS PST_2141 NC_009434.1 2323730 2324074 D hypothetical protein 2323730..2324074 Pseudomonas stutzeri A1501 5098224 YP_001172649.1 CDS glgX NC_009434.1 2324174 2326324 D Code: G; COG: COG1523; glycogen operon protein GlgX 2324174..2326324 Pseudomonas stutzeri A1501 5098225 YP_001172650.1 CDS PST_2143 NC_009434.1 2326612 2327460 D Code: M; COG: COG0739; M24/M37 family peptidase 2326612..2327460 Pseudomonas stutzeri A1501 5098226 YP_001172651.1 CDS PST_2144 NC_009434.1 2327465 2328304 R Code: C; COG: COG3038; cytochrome b561 complement(2327465..2328304) Pseudomonas stutzeri A1501 5098227 YP_001172652.1 CDS PST_2145 NC_009434.1 2328332 2329159 R Code: S; COG: COG3384; catalytic LigB subunit of aromatic ring-opening dioxygenase complement(2328332..2329159) Pseudomonas stutzeri A1501 5098228 YP_001172653.1 CDS PST_2146 NC_009434.1 2329264 2330184 D Code: K; COG: COG0583; LysR family transcriptional regulator 2329264..2330184 Pseudomonas stutzeri A1501 5098229 YP_001172654.1 CDS PST_2147 NC_009434.1 2330481 2331734 D Code: ER; COG: COG1063; Zn-dependent alcohol dehydrogenase 2330481..2331734 Pseudomonas stutzeri A1501 5098230 YP_001172655.1 CDS PST_2148 NC_009434.1 2331749 2332666 D Code: S; COG: COG1801; hypothetical protein 2331749..2332666 Pseudomonas stutzeri A1501 5098231 YP_001172656.1 CDS PST_2149 NC_009434.1 2332663 2333466 D Code: R; COG: COG3568; endonuclease/exonuclease/phosphatase family protein 2332663..2333466 Pseudomonas stutzeri A1501 5098232 YP_001172657.1 CDS PST_2150 NC_009434.1 2333463 2334707 D Code: I; COG: COG1502; cardiolipin synthase 2 2333463..2334707 Pseudomonas stutzeri A1501 5098233 YP_001172658.1 CDS PST_2151 NC_009434.1 2334887 2335711 D Code: S; COG: COG0392; hypothetical protein 2334887..2335711 Pseudomonas stutzeri A1501 5098234 YP_001172659.1 CDS glgB NC_009434.1 2335864 2338242 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(2335864..2338242) Pseudomonas stutzeri A1501 5098235 YP_001172660.1 CDS PST_2153 NC_009434.1 2338070 2341333 R Code: G; COG: COG0366; alpha-amylase family protein complement(2338070..2341333) Pseudomonas stutzeri A1501 5098236 YP_001172661.1 CDS PST_2154 NC_009434.1 2341531 2343543 R Code: G; COG: COG0366; alpha-amylase family protein complement(2341531..2343543) Pseudomonas stutzeri A1501 5098237 YP_001172662.1 CDS PST_2155 NC_009434.1 2343575 2344027 D hypothetical protein 2343575..2344027 Pseudomonas stutzeri A1501 5098238 YP_001172663.1 CDS PST_2156 NC_009434.1 2344031 2344978 R Code: O; COG: COG3058; formate dehydrogenase accessory protein complement(2344031..2344978) Pseudomonas stutzeri A1501 5098239 YP_001172664.1 CDS fdnI-2 NC_009434.1 2345001 2345705 R Code: C; COG: COG2864; nitrate-inducible formate dehydrogenase subunit gamma complement(2345001..2345705) Pseudomonas stutzeri A1501 5098240 YP_001172665.1 CDS fdnH-2 NC_009434.1 2345702 2346640 R Code: C; COG: COG0437; nitrate-inducible formate dehydrogenase subunit beta complement(2345702..2346640) Pseudomonas stutzeri A1501 5098241 YP_001172666.1 CDS PST_2159 NC_009434.1 2346651 2349074 R Code: C; COG: COG0243; formate dehydrogenase-O, major subunit complement(2346651..2349074) Pseudomonas stutzeri A1501 5098242 YP_001172667.1 CDS PST_2160 NC_009434.1 2349123 2349716 R Code: C; COG: COG0243; FdxG protein complement(2349123..2349716) Pseudomonas stutzeri A1501 5098243 YP_001172668.1 CDS PST_2161 NC_009434.1 2349885 2350805 R Code: L; COG: COG3285; hypothetical protein complement(2349885..2350805) Pseudomonas stutzeri A1501 5098244 YP_001172669.1 CDS PST_2162 NC_009434.1 2350809 2351765 R Code: S; COG: COG1273; KU domain-containing protein complement(2350809..2351765) Pseudomonas stutzeri A1501 5098245 YP_001172670.1 CDS PST_2163 NC_009434.1 2351799 2352656 R Code: IQR; COG: COG1028; short-chain dehydrogenase complement(2351799..2352656) Pseudomonas stutzeri A1501 5098246 YP_001172671.1 CDS PST_2164 NC_009434.1 2352763 2353779 R Code: CR; COG: COG0604; zinc-containing alcohol dehydrogenase complement(2352763..2353779) Pseudomonas stutzeri A1501 5098247 YP_001172672.1 CDS mexT NC_009434.1 2354114 2354956 D Code: K; COG: COG0583; transcriptional regulator MexT 2354114..2354956 Pseudomonas stutzeri A1501 5098248 YP_001172673.1 CDS mexE NC_009434.1 2355237 2356466 D Code: M; COG: COG0845; RND multidrug efflux membrane fusion protein MexE 2355237..2356466 Pseudomonas stutzeri A1501 5098249 YP_001172674.1 CDS oprN NC_009434.1 2359733 2361121 D Code: MU; COG: COG1538; outer membrane protein OprN 2359733..2361121 Pseudomonas stutzeri A1501 5098251 YP_001172675.1 CDS PST_2170 NC_009434.1 2361197 2361352 D hypothetical protein 2361197..2361352 Pseudomonas stutzeri A1501 5098252 YP_001172676.1 CDS PST_2171 NC_009434.1 2361376 2362164 D streptomycin 3'-adenyltransferase; aminoglycoside resistance protein 2361376..2362164 Pseudomonas stutzeri A1501 5098253 YP_001172677.1 CDS PST_2172 NC_009434.1 2362161 2362520 D Code: S; COG: COG2315; hypothetical protein 2362161..2362520 Pseudomonas stutzeri A1501 5098254 YP_001172678.1 CDS PST_2173 NC_009434.1 2362809 2363840 D Code: G; COG: COG1638; c4-dicarboxylate-binding protein 2362809..2363840 Pseudomonas stutzeri A1501 5098255 YP_001172679.1 CDS PST_2174 NC_009434.1 2363898 2365319 R Code: MU; COG: COG1538; outer membrane lipoprotein complement(2363898..2365319) Pseudomonas stutzeri A1501 5098256 YP_001172680.1 CDS PST_2175 NC_009434.1 2365388 2368492 R Code: V; COG: COG0841; AcrB/AcrD/AcrF family protein complement(2365388..2368492) Pseudomonas stutzeri A1501 5098257 YP_001172681.1 CDS PST_2176 NC_009434.1 2368521 2371601 R Code: V; COG: COG0841; RND efflux transporter complement(2368521..2371601) Pseudomonas stutzeri A1501 5098258 YP_001172682.1 CDS PST_2177 NC_009434.1 2371598 2372899 R Code: M; COG: COG0845; HlyD family secretion protein complement(2371598..2372899) Pseudomonas stutzeri A1501 5098259 YP_001172683.1 CDS PST_2178 NC_009434.1 2373119 2374585 D hypothetical protein 2373119..2374585 Pseudomonas stutzeri A1501 5098260 YP_001172684.1 CDS strU NC_009434.1 2374688 2375875 R Code: E; COG: COG4091; NAD(P)-dependent oxidoreductase complement(2374688..2375875) Pseudomonas stutzeri A1501 5098261 YP_001172685.1 CDS PST_2180 NC_009434.1 2375872 2376129 R hypothetical protein complement(2375872..2376129) Pseudomonas stutzeri A1501 5098262 YP_001172686.1 CDS tpx NC_009434.1 2376183 2376683 R Code: O; COG: COG2077; thiol peroxidase complement(2376183..2376683) Pseudomonas stutzeri A1501 5098263 YP_001172687.1 CDS PST_2182 NC_009434.1 2376820 2378163 R Code: E; COG: COG1115; sodium:alanine symporter complement(2376820..2378163) Pseudomonas stutzeri A1501 5098264 YP_001172688.1 CDS PST_2183 NC_009434.1 2378645 2382325 R Code: S; COG: COG2911; hypothetical protein complement(2378645..2382325) Pseudomonas stutzeri A1501 5098265 YP_001172689.1 CDS PST_2184 NC_009434.1 2382322 2384142 R Code: M; COG: COG0729; Outer membrane protein complement(2382322..2384142) Pseudomonas stutzeri A1501 5098266 YP_001172690.1 CDS PST_2185 NC_009434.1 2384206 2384841 R Code: KR; COG: COG0454; acetyltransferase complement(2384206..2384841) Pseudomonas stutzeri A1501 5098267 YP_001172691.1 CDS xthA NC_009434.1 2384969 2385874 D removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 2384969..2385874 Pseudomonas stutzeri A1501 5098268 YP_001172692.1 CDS PST_2187 NC_009434.1 2385966 2387339 D Code: P; COG: COG0226; OmpA family protein 2385966..2387339 Pseudomonas stutzeri A1501 5098269 YP_001172693.1 CDS mtlZ NC_009434.1 2387436 2388368 D Code: G; COG: COG0524; fructokinase 2387436..2388368 Pseudomonas stutzeri A1501 5098270 YP_001172694.1 CDS mltR NC_009434.1 2388435 2389340 D Code: K; COG: COG2207; transcriptional activator MltR 2388435..2389340 Pseudomonas stutzeri A1501 5098271 YP_001172695.1 CDS PST_2190 NC_009434.1 2389637 2390944 D Code: G; COG: COG1653; binding protein component of ABC maltose/mannitol transporter 2389637..2390944 Pseudomonas stutzeri A1501 5098272 YP_001172696.1 CDS PST_2191 NC_009434.1 2391027 2391971 D Code: G; COG: COG1175; binding-protein-dependent maltose/mannitol transport protein 2391027..2391971 Pseudomonas stutzeri A1501 5098273 YP_001172697.1 CDS mtlG NC_009434.1 2391982 2392815 D Code: G; COG: COG0395; mannitol ABC transporter permease 2391982..2392815 Pseudomonas stutzeri A1501 5098274 YP_001172698.1 CDS mtlK NC_009434.1 2392854 2393969 D Code: G; COG: COG3839; maltose/maltodextrin ABC transporter ATP-binding protein 2392854..2393969 Pseudomonas stutzeri A1501 5098275 YP_001172699.1 CDS uxuB NC_009434.1 2393929 2395551 D Code: G; COG: COG0246; D-mannonate oxidoreductase 2393929..2395551 Pseudomonas stutzeri A1501 5098276 YP_001172700.1 CDS xylB NC_009434.1 2395562 2397085 D Code: G; COG: COG1070; xylulokinase 2395562..2397085 Pseudomonas stutzeri A1501 5098277 YP_001172701.1 CDS PST_2197 NC_009434.1 2397176 2398549 R Code: I; COG: COG1960; acyl-CoA dehydrogenase complement(2397176..2398549) Pseudomonas stutzeri A1501 5098278 YP_001172702.1 CDS PST_2196 NC_009434.1 2398549 2399460 D Code: K; COG: COG0583; transcriptional regulator 2398549..2399460 Pseudomonas stutzeri A1501 5098279 YP_001172703.1 CDS gntR NC_009434.1 2399485 2400339 R Code: K; COG: COG1609; gluconate utilization system GNT-I transcriptional repressor complement(2399485..2400339) Pseudomonas stutzeri A1501 5098280 YP_001172704.1 CDS PST_2199 NC_009434.1 2400563 2401579 R Code: G; COG: COG1638; putative ABC transporter periplasmic solute-binding protein complement(2400563..2401579) Pseudomonas stutzeri A1501 5098281 YP_001172705.1 CDS PST_2200 NC_009434.1 2401641 2402918 R Code: G; COG: COG1593; hypothetical protein complement(2401641..2402918) Pseudomonas stutzeri A1501 5098282 YP_001172706.1 CDS PST_2201 NC_009434.1 2402969 2404048 R hypothetical protein complement(2402969..2404048) Pseudomonas stutzeri A1501 5098283 YP_001172707.1 CDS PST_2202 NC_009434.1 2404114 2404266 D hypothetical protein 2404114..2404266 Pseudomonas stutzeri A1501 5098284 YP_001172708.1 CDS PST_2203 NC_009434.1 2404277 2404555 D Code: O; COG: COG0760; peptidyl-prolyl cis-trans isomerase C 2404277..2404555 Pseudomonas stutzeri A1501 5098285 YP_001172709.1 CDS PST_2204 NC_009434.1 2404543 2406684 R hypothetical protein complement(2404543..2406684) Pseudomonas stutzeri A1501 5098286 YP_001172710.1 CDS PST_2205 NC_009434.1 2406741 2407985 D Code: E; COG: COG0665; D-amino acid dehydrogenase small subunit 2406741..2407985 Pseudomonas stutzeri A1501 5098287 YP_001172711.1 CDS PST_2206 NC_009434.1 2408089 2409009 D Code: R; COG: COG2358; immunogenic protein 2408089..2409009 Pseudomonas stutzeri A1501 5098288 YP_001172712.1 CDS PST_2209 NC_009434.1 2411415 2413055 D ABC transporter ATP-binding protein 2411415..2413055 Pseudomonas stutzeri A1501 5098290 YP_001172713.1 CDS PST_2210 NC_009434.1 2413116 2413946 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(2413116..2413946) Pseudomonas stutzeri A1501 5098291 YP_001172714.1 CDS PST_2213 NC_009434.1 2415862 2416143 D hypothetical protein 2415862..2416143 Pseudomonas stutzeri A1501 5098293 YP_001172715.1 CDS PST_2214 NC_009434.1 2416240 2416509 D hypothetical protein 2416240..2416509 Pseudomonas stutzeri A1501 5098294 YP_001172716.1 CDS PST_2215 NC_009434.1 2416772 2416933 D hypothetical protein 2416772..2416933 Pseudomonas stutzeri A1501 5098295 YP_001172717.1 CDS PST_2216 NC_009434.1 2417027 2417719 D Code: S; COG: COG2323; putative inner membrane protein 2417027..2417719 Pseudomonas stutzeri A1501 5098296 YP_001172718.1 CDS PST_2217 NC_009434.1 2417756 2419141 D Code: L; COG: COG3569; DNA topoisomerase, type I 2417756..2419141 Pseudomonas stutzeri A1501 5098297 YP_001172719.1 CDS PST_2218 NC_009434.1 2419160 2420044 R sensory box/GGDEF family protein complement(2419160..2420044) Pseudomonas stutzeri A1501 5098298 YP_001172720.1 CDS PST_2219 NC_009434.1 2420119 2421108 R response regulator complement(2420119..2421108) Pseudomonas stutzeri A1501 5098299 YP_001172721.1 CDS PST_2220 NC_009434.1 2421304 2422389 R transposase complement(2421304..2422389) Pseudomonas stutzeri A1501 5098300 YP_001172722.1 CDS yhgI NC_009434.1 2422591 2423175 R yhgI protein complement(2422591..2423175) Pseudomonas stutzeri A1501 5098301 YP_001172723.1 CDS cti NC_009434.1 2423299 2425575 R cis/trans isomerase complement(2423299..2425575) Pseudomonas stutzeri A1501 5098302 YP_001172724.1 CDS metH NC_009434.1 2425739 2429431 D one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 2425739..2429431 Pseudomonas stutzeri A1501 5098303 YP_001172725.1 CDS PST_2224 NC_009434.1 2429486 2429812 D putative lipoprotein 2429486..2429812 Pseudomonas stutzeri A1501 5098304 YP_001172726.1 CDS PST_2225 NC_009434.1 2430107 2431255 D hypothetical protein 2430107..2431255 Pseudomonas stutzeri A1501 5098305 YP_001172727.1 CDS PST_2226 NC_009434.1 2431237 2431797 D Code: H; COG: COG3201; transporter 2431237..2431797 Pseudomonas stutzeri A1501 5098306 YP_001172728.1 CDS PST_2227 NC_009434.1 2431767 2432318 D Code: H; COG: COG3172; nicotinamide-nucleotide adenylyltransferase 2431767..2432318 Pseudomonas stutzeri A1501 5098307 YP_001172729.1 CDS PST_2228 NC_009434.1 2432324 2433313 R hypothetical protein complement(2432324..2433313) Pseudomonas stutzeri A1501 5098308 YP_001172730.1 CDS PST_2229 NC_009434.1 2433354 2433740 R hypothetical protein complement(2433354..2433740) Pseudomonas stutzeri A1501 5098309 YP_001172731.1 CDS PST_2230 NC_009434.1 2434201 2435241 D Code: GEPR; COG: COG0477; transporter 2434201..2435241 Pseudomonas stutzeri A1501 5098310 YP_001172732.1 CDS PST_2231 NC_009434.1 2435264 2436292 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 2435264..2436292 Pseudomonas stutzeri A1501 5098311 YP_001172733.1 CDS PST_2232 NC_009434.1 2436384 2437694 D protein kinase 2436384..2437694 Pseudomonas stutzeri A1501 5098312 YP_001172734.1 CDS PST_2233 NC_009434.1 2437723 2438172 D hypothetical protein 2437723..2438172 Pseudomonas stutzeri A1501 5098313 YP_001172735.1 CDS PST_2234 NC_009434.1 2438324 2438854 D Code: O; COG: COG0071; HSP20 family protein 2438324..2438854 Pseudomonas stutzeri A1501 5098314 YP_001172736.1 CDS PST_2235 NC_009434.1 2438982 2439197 D hypothetical protein 2438982..2439197 Pseudomonas stutzeri A1501 5098315 YP_001172737.1 CDS cysI NC_009434.1 2439535 2441193 D Code: P; COG: COG0155; sulfite reductase 2439535..2441193 Pseudomonas stutzeri A1501 5098316 YP_001172738.1 CDS PST_2237 NC_009434.1 2441177 2441677 D Code: S; COG: COG3749; hypothetical protein 2441177..2441677 Pseudomonas stutzeri A1501 5098317 YP_001172739.1 CDS PST_2238 NC_009434.1 2441724 2441978 D hypothetical protein 2441724..2441978 Pseudomonas stutzeri A1501 5098318 YP_001172740.1 CDS PST_2239 NC_009434.1 2441945 2442937 R Code: CR; COG: COG0604; oxidoreductase complement(2441945..2442937) Pseudomonas stutzeri A1501 5098319 YP_001172741.2 CDS PST_2240 NC_009434.1 2442952 2443974 R SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease complement(2442952..2443974) Pseudomonas stutzeri A1501 5098320 YP_001172742.1 CDS PST_2241 NC_009434.1 2444214 2444852 D Code: G; COG: COG0406; phosphoglycerate mutase family protein 2444214..2444852 Pseudomonas stutzeri A1501 5098321 YP_001172743.1 CDS PST_2242 NC_009434.1 2444849 2445226 D Code: I; COG: COG3255; SCP-2 sterol transfer family protein 2444849..2445226 Pseudomonas stutzeri A1501 5098322 YP_001172744.1 CDS PST_2243 NC_009434.1 2445433 2446500 D Code: R; COG: COG3173; phosphotransferase enzyme family protein 2445433..2446500 Pseudomonas stutzeri A1501 5098323 YP_001172745.1 CDS PST_2244 NC_009434.1 2446557 2447324 D Code: IQR; COG: COG1028; short chain dehydrogenase 2446557..2447324 Pseudomonas stutzeri A1501 5098324 YP_001172746.1 CDS PST_2245 NC_009434.1 2447382 2447939 R hypothetical protein complement(2447382..2447939) Pseudomonas stutzeri A1501 5098325 YP_001172747.1 CDS PST_2246 NC_009434.1 2448227 2449012 D Code: R; COG: COG0730; hypothetical protein 2448227..2449012 Pseudomonas stutzeri A1501 5098326 YP_001172748.1 CDS nudC NC_009434.1 2448980 2449810 R can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase complement(2448980..2449810) Pseudomonas stutzeri A1501 5098327 YP_001172749.1 CDS PST_2248 NC_009434.1 2449810 2451492 R pilin biosynthetic protein complement(2449810..2451492) Pseudomonas stutzeri A1501 5098328 YP_001172750.1 CDS PST_2249 NC_009434.1 2451530 2452342 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2451530..2452342) Pseudomonas stutzeri A1501 5098329 YP_001172751.1 CDS PST_2250 NC_009434.1 2452520 2454772 R Code: E; COG: COG1982; Orn/Arg/Lys decarboxylase complement(2452520..2454772) Pseudomonas stutzeri A1501 5098330 YP_001172752.1 CDS dnaQ NC_009434.1 2454867 2455592 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(2454867..2455592) Pseudomonas stutzeri A1501 5098331 YP_001172753.1 CDS rnhA NC_009434.1 2455607 2456062 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H complement(2455607..2456062) Pseudomonas stutzeri A1501 5098332 YP_001172754.1 CDS PST_2253 NC_009434.1 2456099 2456869 R Code: QR; COG: COG0500; SAM-dependent methyltransferase complement(2456099..2456869) Pseudomonas stutzeri A1501 5098333 YP_001172755.1 CDS gloB NC_009434.1 2456932 2457810 D Code: R; COG: COG0491; hydroxyacylglutathione hydrolase 2456932..2457810 Pseudomonas stutzeri A1501 5098334 YP_001172756.1 CDS mltD NC_009434.1 2457911 2459464 D membrane-bound lytic murein transglycosylase D 2457911..2459464 Pseudomonas stutzeri A1501 5098335 YP_001172757.1 CDS PST_2257 NC_009434.1 2459470 2461119 R signal transduction protein complement(2459470..2461119) Pseudomonas stutzeri A1501 5098336 YP_001172758.1 CDS PST_2256 NC_009434.1 2461061 2462890 D Code: E; COG: COG4166; ABC transporter substrate-binding protein 2461061..2462890 Pseudomonas stutzeri A1501 5098337 YP_001172759.1 CDS PST_2258 NC_009434.1 2462887 2464812 D Code: E; COG: COG4166; peptide ABC transporter periplamic peptide-binding protein 2462887..2464812 Pseudomonas stutzeri A1501 5098338 YP_001172760.1 CDS PST_2259 NC_009434.1 2464815 2465888 D Code: R; COG: COG4174; peptide ABC transporter, permease protein 2464815..2465888 Pseudomonas stutzeri A1501 5098339 YP_001172761.1 CDS PST_2260 NC_009434.1 2465890 2466909 D Code: R; COG: COG4239; peptide ABC transporter, permease protein 2465890..2466909 Pseudomonas stutzeri A1501 5098340 YP_001172762.1 CDS PST_2261 NC_009434.1 2466887 2468572 D ABC transporter ATP-binding protein 2466887..2468572 Pseudomonas stutzeri A1501 5098341 YP_001172763.1 CDS PST_2262 NC_009434.1 2468553 2469347 D Code: I; COG: COG0623; enoyl-(acyl-carrier-protein) reductase 2468553..2469347 Pseudomonas stutzeri A1501 5098342 YP_001172764.1 CDS PST_2263 NC_009434.1 2469415 2470179 R Code: IQR; COG: COG1028; short-chain dehydrogenase complement(2469415..2470179) Pseudomonas stutzeri A1501 5098343 YP_001172765.1 CDS PST_2264 NC_009434.1 2470248 2471381 D Code: K; COG: COG2207; transcriptional regulator 2470248..2471381 Pseudomonas stutzeri A1501 5098344 YP_001172766.1 CDS PST_2265 NC_009434.1 2471483 2473456 R Code: G; COG: COG4993; quinoprotein alcohol dehydrogenase complement(2471483..2473456) Pseudomonas stutzeri A1501 5098345 YP_001172767.1 CDS PST_2266 NC_009434.1 2473538 2474776 D hypothetical protein 2473538..2474776 Pseudomonas stutzeri A1501 5098346 YP_001172768.1 CDS PST_2267 NC_009434.1 2474783 2475712 R Code: R; COG: COG0491; hydrolase complement(2474783..2475712) Pseudomonas stutzeri A1501 5098347 YP_001172769.1 CDS PST_2268 NC_009434.1 2475759 2476067 R hypothetical protein complement(2475759..2476067) Pseudomonas stutzeri A1501 5098348 YP_001172770.1 CDS PST_2269 NC_009434.1 2476582 2477496 R periplasmic binding protein complement(2476582..2477496) Pseudomonas stutzeri A1501 5098349 YP_001172771.1 CDS exaB NC_009434.1 2477496 2477933 R Code: C; COG: COG2010; cytochrome c550 complement(2477496..2477933) Pseudomonas stutzeri A1501 5098350 YP_001172772.1 CDS PST_2270 NC_009434.1 2477917 2480115 D Code: G; COG: COG4993; quinoprotein alcohol dehydrogenase 2477917..2480115 Pseudomonas stutzeri A1501 5098351 YP_001172773.1 CDS PST_2272 NC_009434.1 2480273 2480926 D Code: S; COG: COG1357; pentapeptide repeat-containing protein 2480273..2480926 Pseudomonas stutzeri A1501 5098352 YP_001172774.1 CDS PST_2273 NC_009434.1 2481062 2482378 D methyl-accepting chemotaxis transducer/sensory box protein 2481062..2482378 Pseudomonas stutzeri A1501 5098353 YP_001172775.1 CDS PST_2274 NC_009434.1 2482443 2482826 D ribonuclease D 2482443..2482826 Pseudomonas stutzeri A1501 5098354 YP_001172776.1 CDS PST_2275 NC_009434.1 2483085 2483570 D hypothetical protein 2483085..2483570 Pseudomonas stutzeri A1501 5098355 YP_001172777.1 CDS PST_2276 NC_009434.1 2483671 2485968 R TonB-dependent receptor complement(2483671..2485968) Pseudomonas stutzeri A1501 5098356 YP_001172778.1 CDS PST_2277 NC_009434.1 2486296 2486955 R Code: TK; COG: COG2197; LuxR family DNA-binding response regulator complement(2486296..2486955) Pseudomonas stutzeri A1501 5098357 YP_001172779.1 CDS PST_2278 NC_009434.1 2486955 2488217 R sensor histidine kinase complement(2486955..2488217) Pseudomonas stutzeri A1501 5098358 YP_001172780.1 CDS PST_2279 NC_009434.1 2488258 2488899 R copper-binding protein complement(2488258..2488899) Pseudomonas stutzeri A1501 5098359 YP_001172781.1 CDS PST_2280 NC_009434.1 2489086 2491251 D methyl-accepting chemotaxis receptor/sensory transducer 2489086..2491251 Pseudomonas stutzeri A1501 5098360 YP_001172782.1 CDS PST_2281 NC_009434.1 2491381 2492568 D hypothetical protein 2491381..2492568 Pseudomonas stutzeri A1501 5098361 YP_001172783.1 CDS PST_2282 NC_009434.1 2492571 2493047 D hypothetical protein 2492571..2493047 Pseudomonas stutzeri A1501 5098362 YP_001172784.1 CDS PST_2283 NC_009434.1 2493066 2494037 D outer membrane protein 2493066..2494037 Pseudomonas stutzeri A1501 5098363 YP_001172785.1 CDS PST_2284 NC_009434.1 2494034 2494864 D Code: V; COG: COG1131; ABC efflux transporter, ATP-binding protein 2494034..2494864 Pseudomonas stutzeri A1501 5098364 YP_001172786.1 CDS PST_2285 NC_009434.1 2494861 2495652 D Code: V; COG: COG0842; ABC efflux transporter permease 2494861..2495652 Pseudomonas stutzeri A1501 5098365 YP_001172787.1 CDS PST_2286 NC_009434.1 2495756 2496319 D Code: P; COG: COG0607; rhodanese-related sulfurtransferase 2495756..2496319 Pseudomonas stutzeri A1501 5098366 YP_001172788.1 CDS agmR NC_009434.1 2496373 2497038 D Code: TK; COG: COG2197; DNA-binding response regulator AgmR 2496373..2497038 Pseudomonas stutzeri A1501 5098367 YP_001172789.1 CDS cysG NC_009434.1 2497063 2498505 R siroheme synthase complement(2497063..2498505) Pseudomonas stutzeri A1501 5098368 YP_001172790.1 CDS serS NC_009434.1 2498584 2499864 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(2498584..2499864) Pseudomonas stutzeri A1501 5098369 YP_001172791.1 CDS crcB NC_009434.1 2499937 2500311 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(2499937..2500311) Pseudomonas stutzeri A1501 5098370 YP_001172792.1 CDS PST_2291 NC_009434.1 2500308 2501633 R Code: L; COG: COG2256; recombination factor protein RarA complement(2500308..2501633) Pseudomonas stutzeri A1501 5098371 YP_001172793.1 CDS lolA NC_009434.1 2501707 2502354 R participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein complement(2501707..2502354) Pseudomonas stutzeri A1501 5098372 YP_001172794.1 CDS ftsK NC_009434.1 2502351 2504927 R Code: D; COG: COG1674; cell division protein FtsK complement(2502351..2504927) Pseudomonas stutzeri A1501 5098373 YP_001172795.1 CDS trxB1 NC_009434.1 2504966 2505913 D Code: O; COG: COG0492; thioredoxin reductase 1 2504966..2505913 Pseudomonas stutzeri A1501 5098374 YP_001172796.1 CDS aat NC_009434.1 2505959 2506639 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2505959..2506639 Pseudomonas stutzeri A1501 5098375 YP_001172797.1 CDS PST_2296 NC_009434.1 2506692 2507399 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2506692..2507399 Pseudomonas stutzeri A1501 5098376 YP_001172798.1 CDS infA NC_009434.1 2507497 2507715 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2507497..2507715 Pseudomonas stutzeri A1501 5098377 YP_001172799.1 CDS clpA NC_009434.1 2507840 2510110 R Code: O; COG: COG0542; ATP-dependent Clp protease, ATP-binding subunit ClpA complement(2507840..2510110) Pseudomonas stutzeri A1501 5098378 YP_001172800.1 CDS clpS NC_009434.1 2510140 2510643 R involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS complement(2510140..2510643) Pseudomonas stutzeri A1501 5098379 YP_001172801.1 CDS cspD NC_009434.1 2510703 2510984 D Code: K; COG: COG1278; cold-shock protein CspD 2510703..2510984 Pseudomonas stutzeri A1501 5098380 YP_001172802.1 CDS icd NC_009434.1 2511044 2512300 R Code: C; COG: COG0538; isocitrate dehydrogenase complement(2511044..2512300) Pseudomonas stutzeri A1501 5098381 YP_001172803.1 CDS idh NC_009434.1 2512659 2514887 D Code: C; COG: COG2838; isocitrate dehydrogenase 2512659..2514887 Pseudomonas stutzeri A1501 5098382 YP_001172804.1 CDS PST_2303 NC_009434.1 2514992 2515432 D Code: LR; COG: COG0494; MutT/nudix family protein 2514992..2515432 Pseudomonas stutzeri A1501 5098383 YP_001172805.1 CDS mnmA NC_009434.1 2515500 2516627 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2515500..2516627 Pseudomonas stutzeri A1501 5098384 YP_001172806.1 CDS PST_2305 NC_009434.1 2516624 2517262 D HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2516624..2517262 Pseudomonas stutzeri A1501 5098385 YP_001172807.1 CDS purB NC_009434.1 2517321 2518718 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2517321..2518718 Pseudomonas stutzeri A1501 5098386 YP_001172808.1 CDS PST_2307 NC_009434.1 2518796 2519962 D Code: S; COG: COG2850; hypothetical protein 2518796..2519962 Pseudomonas stutzeri A1501 5098387 YP_001172809.1 CDS PST_2308 NC_009434.1 2519955 2520380 D Code: KR; COG: COG0454; acetyl transferase 2519955..2520380 Pseudomonas stutzeri A1501 5098388 YP_001172810.1 CDS PST_2309 NC_009434.1 2520387 2521016 D hypothetical protein 2520387..2521016 Pseudomonas stutzeri A1501 5098389 YP_001172811.1 CDS PST_2310 NC_009434.1 2521013 2521822 D type II and III secretion system family protein 2521013..2521822 Pseudomonas stutzeri A1501 5098390 YP_001172812.1 CDS PST_2311 NC_009434.1 2522256 2523899 D Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 2522256..2523899 Pseudomonas stutzeri A1501 5098391 YP_001172813.1 CDS PST_2312 NC_009434.1 2524084 2526078 D Code: R; COG: COG3211; UxpB protein 2524084..2526078 Pseudomonas stutzeri A1501 5098392 YP_001172814.1 CDS PST_2313 NC_009434.1 2526125 2527138 R Code: R; COG: COG0628; hypothetical protein complement(2526125..2527138) Pseudomonas stutzeri A1501 5098393 YP_001172815.1 CDS PST_2314 NC_009434.1 2527315 2527593 D Code: L; COG: COG2963; transposase family protein 2527315..2527593 Pseudomonas stutzeri A1501 5098394 YP_001172816.1 CDS PST_2315 NC_009434.1 2527620 2528465 D Code: L; COG: COG2801; IS3 family transposase 2527620..2528465 Pseudomonas stutzeri A1501 5098395 YP_001172817.1 CDS PST_2316 NC_009434.1 2528538 2529854 R Code: R; COG: COG2056; transporter complement(2528538..2529854) Pseudomonas stutzeri A1501 5098396 YP_001172818.1 CDS PST_2317 NC_009434.1 2530039 2530461 R Code: H; COG: COG0720; 6-pyruvoyl tetrahydrobiopterin synthase complement(2530039..2530461) Pseudomonas stutzeri A1501 5098397 YP_001172819.1 CDS PST_2322 NC_009434.1 2536375 2537862 D Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; N-ethylammeline chlorohydrolase 2536375..2537862 Pseudomonas stutzeri A1501 5098402 YP_001172820.1 CDS ubiG NC_009434.1 2537991 2538689 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2537991..2538689 Pseudomonas stutzeri A1501 5098403 YP_001172821.1 CDS gph-2 NC_009434.1 2538689 2539360 D catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 2538689..2539360 Pseudomonas stutzeri A1501 5098404 YP_001172822.1 CDS PST_2325 NC_009434.1 2539445 2540185 D Code: IQR; COG: COG1028; short chain dehydrogenase 2539445..2540185 Pseudomonas stutzeri A1501 5098405 YP_001172823.1 CDS PST_2326 NC_009434.1 2540230 2541123 R Code: J; COG: COG1187; pseudouridine synthase complement(2540230..2541123) Pseudomonas stutzeri A1501 5098406 YP_001172824.1 CDS eda NC_009434.1 2541462 2542106 R catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase complement(2541462..2542106) Pseudomonas stutzeri A1501 5098407 YP_001172825.1 CDS PST_2328 NC_009434.1 2542124 2542837 R Code: G; COG: COG0363; 6-phosphogluconolactonase complement(2542124..2542837) Pseudomonas stutzeri A1501 5098408 YP_001172826.1 CDS PST_2329 NC_009434.1 2542824 2544293 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(2542824..2544293) Pseudomonas stutzeri A1501 5098409 YP_001172827.1 CDS PST_2330 NC_009434.1 2544502 2545425 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(2544502..2545425) Pseudomonas stutzeri A1501 5098410 YP_001172828.1 CDS PST_2331 NC_009434.1 2545728 2546324 D Code: Q; COG: COG1335; isochorismatase superfamily hydrolase 2545728..2546324 Pseudomonas stutzeri A1501 5098411 YP_001172829.1 CDS PST_2332 NC_009434.1 2546382 2546942 D Code: S; COG: COG2840; Smr domain-containing protein 2546382..2546942 Pseudomonas stutzeri A1501 5098412 YP_001172830.1 CDS folE NC_009434.1 2547041 2547586 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2547041..2547586 Pseudomonas stutzeri A1501 5098413 YP_001172831.1 CDS PST_2334 NC_009434.1 2547630 2548232 R Code: O; COG: COG0625; glutathione S-transferase family protein complement(2547630..2548232) Pseudomonas stutzeri A1501 5098414 YP_001172832.1 CDS PST_2335 NC_009434.1 2548279 2549472 R Code: KE; COG: COG1167; aminotransferase complement(2548279..2549472) Pseudomonas stutzeri A1501 5098415 YP_001172833.1 CDS PST_2336 NC_009434.1 2549526 2549969 D Code: K; COG: COG1846; transcriptional regulator 2549526..2549969 Pseudomonas stutzeri A1501 5098416 YP_001172834.1 CDS rpsA NC_009434.1 2550061 2551809 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(2550061..2551809) Pseudomonas stutzeri A1501 5098417 YP_001172835.1 CDS cmk NC_009434.1 2551934 2552623 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(2551934..2552623) Pseudomonas stutzeri A1501 5098418 YP_001172836.1 CDS PST_2339 NC_009434.1 2552620 2554740 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate and catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase complement(2552620..2554740) Pseudomonas stutzeri A1501 5098419 YP_001172837.1 CDS hisC2 NC_009434.1 2554860 2555933 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(2554860..2555933) Pseudomonas stutzeri A1501 5098420 YP_001172838.1 CDS pheA NC_009434.1 2556051 2557148 R Code: E; COG: COG0077; chorismate mutase complement(2556051..2557148) Pseudomonas stutzeri A1501 5098421 YP_001172839.1 CDS serC NC_009434.1 2557148 2558299 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(2557148..2558299) Pseudomonas stutzeri A1501 5098422 YP_001172840.1 CDS gyrA NC_009434.1 2558353 2561217 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(2558353..2561217) Pseudomonas stutzeri A1501 5098423 YP_001172841.1 CDS mtnA NC_009434.1 2561372 2562727 R isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase complement(2561372..2562727) Pseudomonas stutzeri A1501 5098424 YP_001172842.1 CDS PST_2344 NC_009434.1 2562716 2563393 D cell division inhibitor SulA 2562716..2563393 Pseudomonas stutzeri A1501 5098425 YP_001172843.1 CDS PST_2346 NC_009434.1 2563402 2564814 D Code: L; COG: COG0389; DNA repair nucleotidyltransferase/DNA polymerase 2563402..2564814 Pseudomonas stutzeri A1501 5098426 YP_001172844.1 CDS dnaE2 NC_009434.1 2564694 2567891 D DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 2564694..2567891 Pseudomonas stutzeri A1501 5098427 YP_001172845.1 CDS PST_2348 NC_009434.1 2568209 2569636 D hypothetical protein 2568209..2569636 Pseudomonas stutzeri A1501 5098428 YP_001172846.1 CDS PST_2349 NC_009434.1 2570060 2571169 D catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 2570060..2571169 Pseudomonas stutzeri A1501 5098429 YP_001172847.1 CDS PST_2350 NC_009434.1 2571274 2572068 D Code: ET; COG: COG0834; cystine transporter subunit 2571274..2572068 Pseudomonas stutzeri A1501 5098430 YP_001172848.1 CDS PST_2351 NC_009434.1 2572065 2572733 D Code: E; COG: COG0765; cystine ABC transporter permease 2572065..2572733 Pseudomonas stutzeri A1501 5098431 YP_001172849.1 CDS PST_2352 NC_009434.1 2572733 2573491 D Code: E; COG: COG1126; putative amino-acid ABC transporter ATP-binding protein YecC 2572733..2573491 Pseudomonas stutzeri A1501 5098432 YP_001172850.1 CDS PST_2353 NC_009434.1 2573521 2573700 D hypothetical protein 2573521..2573700 Pseudomonas stutzeri A1501 5098433 YP_001172851.1 CDS PST_2354 NC_009434.1 2573719 2574687 R Code: C; COG: COG2141; luciferase family protein complement(2573719..2574687) Pseudomonas stutzeri A1501 5098434 YP_001172852.1 CDS PST_2355 NC_009434.1 2574705 2574911 R hypothetical protein complement(2574705..2574911) Pseudomonas stutzeri A1501 5098435 YP_001172853.1 CDS kefC NC_009434.1 2574908 2576689 R Code: P; COG: COG0475; glutathione-regulated potassium-efflux system protein complement(2574908..2576689) Pseudomonas stutzeri A1501 5098436 YP_001172854.1 CDS PST_2357 NC_009434.1 2577013 2577480 R Code: S; COG: COG3431; hypothetical protein complement(2577013..2577480) Pseudomonas stutzeri A1501 5098437 YP_001172855.1 CDS PST_2358 NC_009434.1 2577717 2580611 R Code: O; COG: COG0542; chaperone-associated ATPase complement(2577717..2580611) Pseudomonas stutzeri A1501 5095251 YP_001172856.1 CDS PST_2359 NC_009434.1 2582165 2583577 D signal transduction ATPase 2582165..2583577 Pseudomonas stutzeri A1501 5095252 YP_001172857.1 CDS PST_2360 NC_009434.1 2583599 2584000 D response regulator 2583599..2584000 Pseudomonas stutzeri A1501 5095253 YP_001172858.1 CDS PST_2362 NC_009434.1 2584342 2584698 R Code: K; COG: COG0789; transcriptional regulator complement(2584342..2584698) Pseudomonas stutzeri A1501 5095255 YP_001172859.1 CDS ihfA NC_009434.1 2584679 2584981 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(2584679..2584981) Pseudomonas stutzeri A1501 5095256 YP_001172860.1 CDS pheT NC_009434.1 2584985 2587363 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(2584985..2587363) Pseudomonas stutzeri A1501 5095257 YP_001172861.2 CDS pheS NC_009434.1 2587400 2588416 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(2587400..2588416) Pseudomonas stutzeri A1501 5095258 YP_001172862.1 CDS rplT NC_009434.1 2588591 2588947 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(2588591..2588947) Pseudomonas stutzeri A1501 5095259 YP_001172863.1 CDS rpmI NC_009434.1 2588975 2589169 R Code: J; COG: COG0291; 50S ribosomal protein L35 complement(2588975..2589169) Pseudomonas stutzeri A1501 5095260 YP_001172864.1 CDS infC NC_009434.1 2589229 2589762 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(2589229..2589762) Pseudomonas stutzeri A1501 5095261 YP_001172865.1 CDS thrS NC_009434.1 2589780 2591702 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(2589780..2591702) Pseudomonas stutzeri A1501 5095262 YP_001172866.1 CDS PST_2371 NC_009434.1 2592176 2593459 D Code: E; COG: COG0665; glycine/D-amino acid oxidase 2592176..2593459 Pseudomonas stutzeri A1501 5095264 YP_001172867.1 CDS PST_2372 NC_009434.1 2593456 2594415 R hypothetical protein complement(2593456..2594415) Pseudomonas stutzeri A1501 5095265 YP_001172868.1 CDS PST_2373 NC_009434.1 2594412 2594813 R hypothetical protein complement(2594412..2594813) Pseudomonas stutzeri A1501 5095266 YP_001172869.1 CDS PST_2374 NC_009434.1 2595018 2595335 D hypothetical protein 2595018..2595335 Pseudomonas stutzeri A1501 5095267 YP_001172870.1 CDS PST_2375 NC_009434.1 2595406 2596434 R hypothetical protein complement(2595406..2596434) Pseudomonas stutzeri A1501 5095268 YP_001172871.1 CDS mobA NC_009434.1 2596636 2597244 D in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2596636..2597244 Pseudomonas stutzeri A1501 5095269 YP_001172872.1 CDS PST_2377 NC_009434.1 2597258 2597512 D putative lipoprotein 2597258..2597512 Pseudomonas stutzeri A1501 5095270 YP_001172873.1 CDS PST_2379 NC_009434.1 2597812 2598117 R Code: OC; COG: COG0526; thiol-disulfide isomerase and thioredoxin complement(2597812..2598117) Pseudomonas stutzeri A1501 5095272 YP_001172874.1 CDS PST_2380 NC_009434.1 2598481 2599773 D porin 2598481..2599773 Pseudomonas stutzeri A1501 5095273 YP_001172875.1 CDS PST_2381 NC_009434.1 2600000 2600401 D Code: S; COG: COG4575; hypothetical protein 2600000..2600401 Pseudomonas stutzeri A1501 5095274 YP_001172876.1 CDS PST_2382 NC_009434.1 2600416 2600796 D Code: S; COG: COG5393; hypothetical protein 2600416..2600796 Pseudomonas stutzeri A1501 5095275 YP_001172877.1 CDS PST_2383 NC_009434.1 2600793 2601113 D hypothetical protein 2600793..2601113 Pseudomonas stutzeri A1501 5095276 YP_001172878.1 CDS PST_2384 NC_009434.1 2601271 2602602 D dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2601271..2602602 Pseudomonas stutzeri A1501 5095277 YP_001172879.1 CDS PST_2385 NC_009434.1 2602670 2603701 D hypothetical protein 2602670..2603701 Pseudomonas stutzeri A1501 5095278 YP_001172880.1 CDS PST_2386 NC_009434.1 2603685 2604029 R Code: S; COG: COG3171; hypothetical protein complement(2603685..2604029) Pseudomonas stutzeri A1501 5095279 YP_001172881.1 CDS dacB NC_009434.1 2604295 2605752 D Code: M; COG: COG2027; D-alanyl-D-alanine carboxypeptidase 2604295..2605752 Pseudomonas stutzeri A1501 5095280 YP_001172882.1 CDS rlmL NC_009434.1 2605800 2607977 R catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase complement(2605800..2607977) Pseudomonas stutzeri A1501 5095281 YP_001172883.1 CDS rmf NC_009434.1 2608337 2608552 D Code: J; COG: COG3130; ribosome modulation factor-related protein 2608337..2608552 Pseudomonas stutzeri A1501 5095282 YP_001172884.1 CDS pyrD NC_009434.1 2608644 2609675 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(2608644..2609675) Pseudomonas stutzeri A1501 5095283 YP_001172885.1 CDS PST_2392 NC_009434.1 2609787 2610008 R type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit complement(2609787..2610008) Pseudomonas stutzeri A1501 5095284 YP_001172886.1 CDS PST_2391 NC_009434.1 2610002 2611081 D hypothetical protein 2610002..2611081 Pseudomonas stutzeri A1501 5095285 YP_001172887.1 CDS PST_2393 NC_009434.1 2611206 2616056 R Code: E; COG: COG2902; NAD-specific glutamate dehydrogenase complement(2611206..2616056) Pseudomonas stutzeri A1501 5095286 YP_001172888.1 CDS PST_2394 NC_009434.1 2616202 2617227 D Code: R; COG: COG0714; MoxR protein, putative 2616202..2617227 Pseudomonas stutzeri A1501 5095287 YP_001172889.1 CDS PST_2395 NC_009434.1 2617227 2618189 D Code: R; COG: COG1721; hypothetical protein 2617227..2618189 Pseudomonas stutzeri A1501 5095288 YP_001172890.1 CDS PST_2396 NC_009434.1 2618186 2618680 D hypothetical protein 2618186..2618680 Pseudomonas stutzeri A1501 5095289 YP_001172891.1 CDS PST_2397 NC_009434.1 2618673 2619692 D Code: R; COG: COG2304; von Willebrand factor type A domain-containing protein 2618673..2619692 Pseudomonas stutzeri A1501 5095290 YP_001172892.1 CDS PST_2398 NC_009434.1 2619689 2621398 D Code: R; COG: COG2304; hypothetical protein 2619689..2621398 Pseudomonas stutzeri A1501 5095291 YP_001172893.1 CDS PST_2399 NC_009434.1 2621308 2623023 D hypothetical protein 2621308..2623023 Pseudomonas stutzeri A1501 5095292 YP_001172894.1 CDS nasS NC_009434.1 2622929 2624377 D Code: P; COG: COG0715; nitrate-binding protein NasS 2622929..2624377 Pseudomonas stutzeri A1501 5095293 YP_001172895.1 CDS nasT NC_009434.1 2624343 2624969 D Code: T; COG: COG3707; response regulator NasT 2624343..2624969 Pseudomonas stutzeri A1501 5095294 YP_001172896.1 CDS PST_2402 NC_009434.1 2625039 2625959 D hypothetical protein 2625039..2625959 Pseudomonas stutzeri A1501 5095295 YP_001172897.1 CDS PST_2403 NC_009434.1 2626155 2626598 D thioesterase 2626155..2626598 Pseudomonas stutzeri A1501 5095296 YP_001172898.1 CDS PST_2404 NC_009434.1 2626595 2627530 R Code: G; COG: COG1105; carbohydrate kinase complement(2626595..2627530) Pseudomonas stutzeri A1501 5095297 YP_001172899.1 CDS PST_2405 NC_009434.1 2627705 2627884 D hypothetical protein 2627705..2627884 Pseudomonas stutzeri A1501 5095298 YP_001172900.1 CDS nasA NC_009434.1 2627881 2629092 D Code: P; COG: COG2223; nitrate transporter 2627881..2629092 Pseudomonas stutzeri A1501 5095299 YP_001172901.1 CDS PST_2407 NC_009434.1 2629004 2630827 D serine/threonine-protein kinase 2629004..2630827 Pseudomonas stutzeri A1501 5095300 YP_001172902.1 CDS PST_2408 NC_009434.1 2630829 2631137 R hypothetical protein complement(2630829..2631137) Pseudomonas stutzeri A1501 5095301 YP_001172903.1 CDS PST_2409 NC_009434.1 2631627 2634092 D Code: C; COG: COG1251; assimilatory nitrite reductase large subunit 2631627..2634092 Pseudomonas stutzeri A1501 5095302 YP_001172904.1 CDS PST_2410 NC_009434.1 2634116 2634445 D Code: PR; COG: COG2146; assimilatory nitrite reductase small subunit 2634116..2634445 Pseudomonas stutzeri A1501 5095303 YP_001172905.1 CDS PST_2411 NC_009434.1 2634488 2637193 D Code: C; COG: COG0243; assimilatory nitrate reductase 2634488..2637193 Pseudomonas stutzeri A1501 5095304 YP_001172906.1 CDS cobA NC_009434.1 2637117 2637956 D catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 2637117..2637956 Pseudomonas stutzeri A1501 5095305 YP_001172907.1 CDS PST_2413 NC_009434.1 2638051 2640405 R Code: R; COG: COG1033; hypothetical protein complement(2638051..2640405) Pseudomonas stutzeri A1501 5095306 YP_001172908.1 CDS PST_2414 NC_009434.1 2640422 2641513 R Code: R; COG: COG4447; BNR/Asp-box repeat-containing protein complement(2640422..2641513) Pseudomonas stutzeri A1501 5095307 YP_001172909.1 CDS pepN NC_009434.1 2641863 2644523 R Code: E; COG: COG0308; aminopeptidase N complement(2641863..2644523) Pseudomonas stutzeri A1501 5095308 YP_001172910.1 CDS PST_2416 NC_009434.1 2644742 2645548 R hypothetical protein complement(2644742..2645548) Pseudomonas stutzeri A1501 5095309 YP_001172911.1 CDS PST_2417 NC_009434.1 2645581 2645859 R Code: S; COG: COG3139; hypothetical protein complement(2645581..2645859) Pseudomonas stutzeri A1501 5095310 YP_001172912.1 CDS PST_2418 NC_009434.1 2645931 2646788 R Code: R; COG: COG0705; rhomboid family protein complement(2645931..2646788) Pseudomonas stutzeri A1501 5095311 YP_001172913.1 CDS PST_2419 NC_009434.1 2646785 2647753 R Code: T; COG: COG0639; serine/threonine protein phosphatase complement(2646785..2647753) Pseudomonas stutzeri A1501 5095312 YP_001172914.1 CDS ppnK NC_009434.1 2647753 2648742 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(2647753..2648742) Pseudomonas stutzeri A1501 5095313 YP_001172915.1 CDS PST_2421 NC_009434.1 2648842 2649804 D Code: S; COG: COG3782; hypothetical protein 2648842..2649804 Pseudomonas stutzeri A1501 5095314 YP_001172916.1 CDS PST_2422 NC_009434.1 2649863 2651083 D Code: P; COG: COG2059; transporter 2649863..2651083 Pseudomonas stutzeri A1501 5095315 YP_001172917.1 CDS PST_2423 NC_009434.1 2651090 2651842 R hypothetical protein complement(2651090..2651842) Pseudomonas stutzeri A1501 5095316 YP_001172918.1 CDS PST_2424 NC_009434.1 2651952 2652908 D Code: K; COG: COG0583; LysR family transcriptional regulator 2651952..2652908 Pseudomonas stutzeri A1501 5095317 YP_001172919.1 CDS PST_2425 NC_009434.1 2652912 2653253 R hypothetical protein complement(2652912..2653253) Pseudomonas stutzeri A1501 5095318 YP_001172920.1 CDS speE NC_009434.1 2653567 2654427 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(2653567..2654427) Pseudomonas stutzeri A1501 5095319 YP_001172921.1 CDS alkA NC_009434.1 2654614 2655489 D Code: L; COG: COG0122; DNA-3-methyladenine glycosidase II 2654614..2655489 Pseudomonas stutzeri A1501 5095320 YP_001172922.1 CDS PST_2428 NC_009434.1 2655498 2656058 R fructose-2,6-bisphosphatase complement(2655498..2656058) Pseudomonas stutzeri A1501 5095321 YP_001172923.1 CDS PST_2429 NC_009434.1 2656062 2656253 R hypothetical protein complement(2656062..2656253) Pseudomonas stutzeri A1501 5095322 YP_001172924.1 CDS PST_2430 NC_009434.1 2656260 2656469 R hypothetical protein complement(2656260..2656469) Pseudomonas stutzeri A1501 5095323 YP_001172925.1 CDS PST_2431 NC_009434.1 2656678 2657223 R Code: S; COG: COG1791; oxidase complement(2656678..2657223) Pseudomonas stutzeri A1501 5095324 YP_001172926.1 CDS PST_2432 NC_009434.1 2657460 2658611 R Code: GEPR; COG: COG0477; MFS metabolite transporter complement(2657460..2658611) Pseudomonas stutzeri A1501 5095325 YP_001172927.1 CDS aroC NC_009434.1 2658677 2659768 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(2658677..2659768) Pseudomonas stutzeri A1501 5095326 YP_001172928.1 CDS PST_2434 NC_009434.1 2659925 2660887 D Code: R; COG: COG1073; alpha/beta fold family hydrolase 2659925..2660887 Pseudomonas stutzeri A1501 5095327 YP_001172929.1 CDS PST_2435 NC_009434.1 2660968 2661747 D hypothetical protein 2660968..2661747 Pseudomonas stutzeri A1501 5095328 YP_001172930.1 CDS PST_2436 NC_009434.1 2661752 2662975 R Code: G; COG: COG4580; maltoporin complement(2661752..2662975) Pseudomonas stutzeri A1501 5095329 YP_001172931.1 CDS gltK NC_009434.1 2663080 2664252 R Code: G; COG: COG3839; glucose ABC transporter ATP-binding protein complement(2663080..2664252) Pseudomonas stutzeri A1501 5095330 YP_001172932.1 CDS PST_2438 NC_009434.1 2664264 2665106 R Code: G; COG: COG0395; glucose ABC transporter permease complement(2664264..2665106) Pseudomonas stutzeri A1501 5095331 YP_001172933.1 CDS PST_2439 NC_009434.1 2665099 2666016 R Code: G; COG: COG1175; sugar ABC transporter permease complement(2665099..2666016) Pseudomonas stutzeri A1501 5095332 YP_001172934.1 CDS PST_2440 NC_009434.1 2666126 2667454 R Code: G; COG: COG1653; binding protein component of ABC sugar transporter complement(2666126..2667454) Pseudomonas stutzeri A1501 5095333 YP_001172935.1 CDS PST_2441 NC_009434.1 2667533 2668984 R Code: T; COG: COG0642; sensor histidine kinase complement(2667533..2668984) Pseudomonas stutzeri A1501 5095334 YP_001172936.1 CDS gltR NC_009434.1 2668968 2669702 R Code: TK; COG: COG0745; two-component response regulator GltR complement(2668968..2669702) Pseudomonas stutzeri A1501 5095335 YP_001172937.1 CDS glk NC_009434.1 2669760 2670722 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(2669760..2670722) Pseudomonas stutzeri A1501 5095336 YP_001172938.1 CDS PST_2444 NC_009434.1 2670719 2672548 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(2670719..2672548) Pseudomonas stutzeri A1501 5095337 YP_001172939.1 CDS PST_2445 NC_009434.1 2672721 2673530 R Code: K; COG: COG1386; transcriptional regulator complement(2672721..2673530) Pseudomonas stutzeri A1501 5095338 YP_001172940.1 CDS PST_2446 NC_009434.1 2673508 2674248 R Code: S; COG: COG1354; hypothetical protein complement(2673508..2674248) Pseudomonas stutzeri A1501 5095339 YP_001172941.1 CDS PST_2447 NC_009434.1 2674354 2675568 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(2674354..2675568) Pseudomonas stutzeri A1501 5095340 YP_001172942.1 CDS PST_2448 NC_009434.1 2675769 2676392 R Code: J; COG: COG0009; Sua5/YciO/YrdC/YwlC family protein complement(2675769..2676392) Pseudomonas stutzeri A1501 5095341 YP_001172943.1 CDS PST_2449 NC_009434.1 2676406 2677272 R Code: R; COG: COG0613; phosphotransferase domain-containing protein complement(2676406..2677272) Pseudomonas stutzeri A1501 5095342 YP_001172944.1 CDS PST_2450 NC_009434.1 2677616 2677915 D unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 2677616..2677915 Pseudomonas stutzeri A1501 5095343 YP_001172945.1 CDS PST_2451 NC_009434.1 2677989 2678366 D hypothetical protein 2677989..2678366 Pseudomonas stutzeri A1501 5095344 YP_001172946.1 CDS PST_2452 NC_009434.1 2678380 2679057 D Code: TK; COG: COG0745; DNA-binding response regulator 2678380..2679057 Pseudomonas stutzeri A1501 5095345 YP_001172947.1 CDS PST_2453 NC_009434.1 2679215 2679628 D Code: UNTP; COG: COG3678; hypothetical protein 2679215..2679628 Pseudomonas stutzeri A1501 5095346 YP_001172948.1 CDS PST_2454 NC_009434.1 2679719 2681077 D Code: T; COG: COG0642; sensor histidine kinase 2679719..2681077 Pseudomonas stutzeri A1501 5095347 YP_001172949.1 CDS PST_2455 NC_009434.1 2681071 2681634 R Code: C; COG: COG0778; nitroreductase family protein complement(2681071..2681634) Pseudomonas stutzeri A1501 5095348 YP_001172950.1 CDS PST_2456 NC_009434.1 2681726 2682097 R Code: R; COG: COG0727; ferredoxin complement(2681726..2682097) Pseudomonas stutzeri A1501 5095349 YP_001172951.1 CDS trkH NC_009434.1 2682206 2683738 D Code: P; COG: COG0168; potassium uptake protein TrkH 2682206..2683738 Pseudomonas stutzeri A1501 5095350 YP_001172952.1 CDS PST_2458 NC_009434.1 2683739 2684530 R Code: S; COG: COG2354; hypothetical protein complement(2683739..2684530) Pseudomonas stutzeri A1501 5095351 YP_001172953.1 CDS PST_2459 NC_009434.1 2684738 2685751 R Code: K; COG: COG2207; AraC family transcriptional regulator complement(2684738..2685751) Pseudomonas stutzeri A1501 5095352 YP_001172954.1 CDS PST_2460 NC_009434.1 2685872 2686189 D Code: S; COG: COG4323; hypothetical protein 2685872..2686189 Pseudomonas stutzeri A1501 5095353 YP_001172955.1 CDS PST_2461 NC_009434.1 2686450 2687838 D Code: T; COG: COG2114; adenylate cyclase 2686450..2687838 Pseudomonas stutzeri A1501 5095354 YP_001172956.1 CDS PST_2462 NC_009434.1 2687847 2688668 D Code: K; COG: COG2207; AraC family transcriptional regulator 2687847..2688668 Pseudomonas stutzeri A1501 5095355 YP_001172957.1 CDS PST_2463 NC_009434.1 2688837 2689667 D Code: GER; COG: COG0697; hypothetical protein 2688837..2689667 Pseudomonas stutzeri A1501 5095356 YP_001172958.1 CDS PST_2464 NC_009434.1 2689692 2689973 R Code: O; COG: COG3526; hypothetical protein complement(2689692..2689973) Pseudomonas stutzeri A1501 5095357 YP_001172959.1 CDS PST_2465 NC_009434.1 2690024 2692231 D outer membrane protein 2690024..2692231 Pseudomonas stutzeri A1501 5095358 YP_001172960.1 CDS PST_2466 NC_009434.1 2692228 2692677 R Code: K; COG: COG1846; MarR family transcriptional regulator complement(2692228..2692677) Pseudomonas stutzeri A1501 5095359 YP_001172961.1 CDS recQ NC_009434.1 2692840 2694963 R Code: L; COG: COG0514; ATP-dependent DNA helicase RecQ complement(2692840..2694963) Pseudomonas stutzeri A1501 5095360 YP_001172962.1 CDS PST_2468 NC_009434.1 2695133 2695720 D related to the C-terminal domain of SecA; Code: R; COG: COG3318; metal-binding protein 2695133..2695720 Pseudomonas stutzeri A1501 5095361 YP_001172963.1 CDS PST_2469 NC_009434.1 2695906 2696325 D Code: S; COG: COG2832; hypothetical protein 2695906..2696325 Pseudomonas stutzeri A1501 5095362 YP_001172964.1 CDS PST_2470 NC_009434.1 2696372 2696950 R Code: S; COG: COG3148; hypothetical protein complement(2696372..2696950) Pseudomonas stutzeri A1501 5095363 YP_001172965.1 CDS gstA NC_009434.1 2697038 2697709 D Code: O; COG: COG0625; glutathione S-transferase 2697038..2697709 Pseudomonas stutzeri A1501 5095364 YP_001172966.1 CDS PST_2472 NC_009434.1 2697716 2697841 R hypothetical protein complement(2697716..2697841) Pseudomonas stutzeri A1501 5095365 YP_001172967.1 CDS aceK NC_009434.1 2698039 2699781 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(2698039..2699781) Pseudomonas stutzeri A1501 5095366 YP_001172968.1 CDS PST_2474 NC_009434.1 2699886 2700803 D Code: GER; COG: COG0697; DMT family permease 2699886..2700803 Pseudomonas stutzeri A1501 5095367 YP_001172969.1 CDS cysK NC_009434.1 2700829 2701929 R Code: E; COG: COG0031; cysteine synthase A complement(2700829..2701929) Pseudomonas stutzeri A1501 5095368 YP_001172970.1 CDS PST_2475 NC_009434.1 2701928 2702998 D hypothetical protein 2701928..2702998 Pseudomonas stutzeri A1501 5095369 YP_001172971.1 CDS PST_2477 NC_009434.1 2703144 2703992 D Code: R; COG: COG0714; AAA ATPase 2703144..2703992 Pseudomonas stutzeri A1501 5095370 YP_001172972.1 CDS PST_2478 NC_009434.1 2704045 2704449 D Code: S; COG: COG3791; hypothetical protein 2704045..2704449 Pseudomonas stutzeri A1501 5095371 YP_001172973.1 CDS PST_2479 NC_009434.1 2704493 2705671 D Code: S; COG: COG3825; hypothetical protein 2704493..2705671 Pseudomonas stutzeri A1501 5095372 YP_001172974.1 CDS PST_2480 NC_009434.1 2705718 2706233 R hypothetical protein complement(2705718..2706233) Pseudomonas stutzeri A1501 5095373 YP_001172975.1 CDS PST_2481 NC_009434.1 2706227 2707009 R Code: R; COG: COG0121; glutamine amidotransferase complement(2706227..2707009) Pseudomonas stutzeri A1501 5095374 YP_001172976.1 CDS PST_2482 NC_009434.1 2707054 2707557 R major facilitator superfamily permease complement(2707054..2707557) Pseudomonas stutzeri A1501 5095375 YP_001172977.1 CDS PST_2483 NC_009434.1 2707748 2708188 D Code: T; COG: COG0589; universal stress protein 2707748..2708188 Pseudomonas stutzeri A1501 5095376 YP_001172978.1 CDS PST_2484 NC_009434.1 2708233 2708925 R hypothetical protein complement(2708233..2708925) Pseudomonas stutzeri A1501 5095377 YP_001172979.1 CDS PST_2485 NC_009434.1 2709080 2710996 R Code: R; COG: COG0488; ABC transporter ATP-binding protein complement(2709080..2710996) Pseudomonas stutzeri A1501 5095378 YP_001172980.1 CDS PST_2486 NC_009434.1 2711229 2713211 D Code: M; COG: COG0741; soluble lytic transglycosylase 2711229..2713211 Pseudomonas stutzeri A1501 5095379 YP_001172981.1 CDS PST_2487 NC_009434.1 2713257 2714057 R Code: R; COG: COG3217; MOSC domain-containing protein complement(2713257..2714057) Pseudomonas stutzeri A1501 5095380 YP_001172982.1 CDS chev-2 NC_009434.1 2714136 2715068 R chemotaxis protein CheV complement(2714136..2715068) Pseudomonas stutzeri A1501 5095381 YP_001172983.1 CDS PST_2489 NC_009434.1 2715181 2716092 R cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase complement(2715181..2716092) Pseudomonas stutzeri A1501 5095382 YP_001172984.1 CDS PST_2490 NC_009434.1 2716152 2716334 D hypothetical protein 2716152..2716334 Pseudomonas stutzeri A1501 5095383 YP_001172985.1 CDS PST_2491 NC_009434.1 2716468 2717895 D Code: M; COG: COG2148; capsular polysaccharide biosynthesis protein 2716468..2717895 Pseudomonas stutzeri A1501 5095384 YP_001172986.1 CDS PST_2492 NC_009434.1 2718068 2718433 D Code: T; COG: COG0394; low molecular weight phosphotyrosine protein phosphatase family protein 2718068..2718433 Pseudomonas stutzeri A1501 5095385 YP_001172987.1 CDS PST_2493 NC_009434.1 2718505 2720721 D Code: M; COG: COG3206; tyrosine-protein kinase 2718505..2720721 Pseudomonas stutzeri A1501 5095386 YP_001172988.1 CDS PST_2494 NC_009434.1 2720853 2721935 D Code: G; COG: COG2730; endoglucanase 2720853..2721935 Pseudomonas stutzeri A1501 5095387 YP_001172989.1 CDS PST_2495 NC_009434.1 2721954 2723141 D hypothetical protein 2721954..2723141 Pseudomonas stutzeri A1501 5095388 YP_001172990.1 CDS PST_2496 NC_009434.1 2723192 2724376 D hypothetical protein 2723192..2724376 Pseudomonas stutzeri A1501 5095389 YP_001172991.1 CDS PST_2497 NC_009434.1 2724441 2725691 D hypothetical protein 2724441..2725691 Pseudomonas stutzeri A1501 5095390 YP_001172992.1 CDS PST_2498 NC_009434.1 2725736 2726989 D hypothetical protein 2725736..2726989 Pseudomonas stutzeri A1501 5095391 YP_001172993.1 CDS PST_2499 NC_009434.1 2726949 2727824 D Code: R; COG: COG1216; hypothetical protein 2726949..2727824 Pseudomonas stutzeri A1501 5095461 YP_001172994.1 CDS PST_2500 NC_009434.1 2727817 2728584 D Code: M; COG: COG1922; N-acetyl-mannosamine transferase 2727817..2728584 Pseudomonas stutzeri A1501 5095462 YP_001172995.1 CDS PST_2501 NC_009434.1 2728993 2730129 D Code: M; COG: COG1596; capsular polysaccharide biosynthesis protein 2728993..2730129 Pseudomonas stutzeri A1501 5095463 YP_001172996.1 CDS PST_2502 NC_009434.1 2730394 2731578 R Code: I; COG: COG0183; acyl-CoA thiolase complement(2730394..2731578) Pseudomonas stutzeri A1501 5095464 YP_001172997.1 CDS PST_2503 NC_009434.1 2731858 2733357 R Code: S; COG: COG2326; hypothetical protein complement(2731858..2733357) Pseudomonas stutzeri A1501 5095465 YP_001172998.1 CDS PST_2504 NC_009434.1 2733582 2734310 D Code: Q; COG: COG2977; siderophore biosynthesis protein 2733582..2734310 Pseudomonas stutzeri A1501 5095466 YP_001172999.1 CDS PST_2505 NC_009434.1 2734476 2734883 D dehydrogenase 2734476..2734883 Pseudomonas stutzeri A1501 5095467 YP_001173000.1 CDS ihfB NC_009434.1 2735010 2735291 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta complement(2735010..2735291) Pseudomonas stutzeri A1501 5095468 YP_001173001.1 CDS PST_2507 NC_009434.1 2735545 2737206 R Code: LKJ; COG: COG0513; DEAD/DEAH box helicase complement(2735545..2737206) Pseudomonas stutzeri A1501 5095469 YP_001173002.1 CDS PST_2508 NC_009434.1 2737538 2739700 R methyl-accepting chemotaxis transducer complement(2737538..2739700) Pseudomonas stutzeri A1501 5095470 YP_001173003.1 CDS PST_2509 NC_009434.1 2739996 2740745 R Code: E; COG: COG0421; spermidine synthase complement(2739996..2740745) Pseudomonas stutzeri A1501 5095471 YP_001173004.1 CDS PST_2510 NC_009434.1 2740878 2742233 D Code: E; COG: COG3200; phospho-2-dehydro-3-deoxyheptonate aldolase 2740878..2742233 Pseudomonas stutzeri A1501 5095472 YP_001173005.1 CDS PST_2511 NC_009434.1 2742375 2743823 D Code: P; COG: COG0471; di- and tricarboxylate transporter 2742375..2743823 Pseudomonas stutzeri A1501 5095473 YP_001173006.1 CDS efp NC_009434.1 2743891 2744457 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(2743891..2744457) Pseudomonas stutzeri A1501 5095474 YP_001173007.1 CDS PST_2513 NC_009434.1 2744503 2745603 R Code: S; COG: COG4394; hypothetical protein complement(2744503..2745603) Pseudomonas stutzeri A1501 5095475 YP_001173008.1 CDS PST_2514 NC_009434.1 2745996 2746169 R hypothetical protein complement(2745996..2746169) Pseudomonas stutzeri A1501 5095476 YP_001173009.1 CDS PST_2515 NC_009434.1 2746230 2747216 D Code: R; COG: COG3380; amine oxidase, flavin-containing 2746230..2747216 Pseudomonas stutzeri A1501 5095477 YP_001173010.1 CDS PST_2516 NC_009434.1 2747318 2748127 D Code: N; COG: COG1291; chemotaxis protein MotA 2747318..2748127 Pseudomonas stutzeri A1501 5095478 YP_001173011.1 CDS PST_2517 NC_009434.1 2748130 2748864 D Code: N; COG: COG1360; flagellar motor protein MotB 2748130..2748864 Pseudomonas stutzeri A1501 5095479 YP_001173012.1 CDS PST_2518 NC_009434.1 2748869 2749801 R Code: P; COG: COG0428; hypothetical protein complement(2748869..2749801) Pseudomonas stutzeri A1501 5095480 YP_001173013.1 CDS PST_2519 NC_009434.1 2749986 2751170 D membrane fusion protein 2749986..2751170 Pseudomonas stutzeri A1501 5095481 YP_001173014.1 CDS PST_2520 NC_009434.1 2751175 2752395 D Code: M; COG: COG4591; lipoprotein release ABC transporter permease 2751175..2752395 Pseudomonas stutzeri A1501 5095482 YP_001173015.1 CDS PST_2521 NC_009434.1 2752388 2753119 D Code: V; COG: COG1136; lipoprotein releasing system, ATP-binding protein 2752388..2753119 Pseudomonas stutzeri A1501 5095483 YP_001173016.1 CDS PST_2522 NC_009434.1 2753281 2754144 D Code: R; COG: COG0491; metallo-beta-lactamase family protein 2753281..2754144 Pseudomonas stutzeri A1501 5095484 YP_001173017.1 CDS PST_2523 NC_009434.1 2754169 2755917 D Code: R; COG: COG0446; hypothetical protein 2754169..2755917 Pseudomonas stutzeri A1501 5095485 YP_001173018.1 CDS PST_2524 NC_009434.1 2755914 2757692 D Code: P; COG: COG0659; sulfate transporter 2755914..2757692 Pseudomonas stutzeri A1501 5095486 YP_001173019.1 CDS PST_2525 NC_009434.1 2757689 2758069 D Code: P; COG: COG0607; rhodanese-like domain-containing protein 2757689..2758069 Pseudomonas stutzeri A1501 5095487 YP_001173020.1 CDS PST_2526 NC_009434.1 2758346 2758765 R Code: R; COG: COG2391; YeeE/YedE family protein complement(2758346..2758765) Pseudomonas stutzeri A1501 5095488 YP_001173021.1 CDS PST_2527 NC_009434.1 2758768 2759202 R Code: R; COG: COG2391; YeeE/YedE family protein complement(2758768..2759202) Pseudomonas stutzeri A1501 5095489 YP_001173022.1 CDS PST_2528 NC_009434.1 2759199 2759516 R Code: K; COG: COG0640; ArsR family regulatory protein complement(2759199..2759516) Pseudomonas stutzeri A1501 5095490 YP_001173023.1 CDS PST_2529 NC_009434.1 2759704 2759994 D hypothetical protein 2759704..2759994 Pseudomonas stutzeri A1501 5095491 YP_001173024.1 CDS PST_2531 NC_009434.1 2760297 2761316 D hypothetical protein 2760297..2761316 Pseudomonas stutzeri A1501 5095494 YP_001173025.1 CDS PST_2533 NC_009434.1 2761371 2762048 D Code: O; COG: COG0625; glutathione S-transferase 2761371..2762048 Pseudomonas stutzeri A1501 5095495 YP_001173026.1 CDS PST_2534 NC_009434.1 2762111 2763001 R Code: R; COG: COG2607; AAA ATPase complement(2762111..2763001) Pseudomonas stutzeri A1501 5095496 YP_001173027.1 CDS PST_2535 NC_009434.1 2763089 2763571 R Code: O; COG: COG0386; glutathione peroxidase complement(2763089..2763571) Pseudomonas stutzeri A1501 5095497 YP_001173028.1 CDS PST_2536 NC_009434.1 2763588 2764133 R Code: O; COG: COG0229; PilB-related protein complement(2763588..2764133) Pseudomonas stutzeri A1501 5095498 YP_001173029.1 CDS PST_2537 NC_009434.1 2764257 2765468 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2764257..2765468 Pseudomonas stutzeri A1501 5095499 YP_001173030.1 CDS PST_2538 NC_009434.1 2765473 2765943 D hypothetical protein 2765473..2765943 Pseudomonas stutzeri A1501 5095500 YP_001173031.1 CDS htpX NC_009434.1 2766032 2766904 D putative metalloprotease; heat shock protein HtpX 2766032..2766904 Pseudomonas stutzeri A1501 5095501 YP_001173032.1 CDS PST_2540 NC_009434.1 2766955 2767632 D DNA repair ATPase 2766955..2767632 Pseudomonas stutzeri A1501 5095502 YP_001173033.1 CDS PST_2541 NC_009434.1 2767655 2768314 R Code: QR; COG: COG0500; thiopurine s-methyltransferase complement(2767655..2768314) Pseudomonas stutzeri A1501 5095503 YP_001173034.1 CDS fleR NC_009434.1 2768371 2769591 R Code: T; COG: COG2204; sigma-54 dependent transcriptional regulator/response regulator FleR complement(2768371..2769591) Pseudomonas stutzeri A1501 5095504 YP_001173035.1 CDS fleS NC_009434.1 2769770 2770957 R Code: T; COG: COG0642; sensory box histidine kinase FleS complement(2769770..2770957) Pseudomonas stutzeri A1501 5095505 YP_001173036.1 CDS fleQ NC_009434.1 2771091 2772605 R Code: T; COG: COG2204; transcriptional regulator FleQ complement(2771091..2772605) Pseudomonas stutzeri A1501 5095506 YP_001173037.1 CDS PST_2545 NC_009434.1 2772944 2773240 R signal transduction histidine kinase complement(2772944..2773240) Pseudomonas stutzeri A1501 5095507 YP_001173038.1 CDS PST_2546 NC_009434.1 2773382 2773822 R putative lipoprotein complement(2773382..2773822) Pseudomonas stutzeri A1501 5095508 YP_001173039.1 CDS cycH NC_009434.1 2773840 2775060 R Code: O; COG: COG4235; cytochrome c-type biogenesis protein complement(2773840..2775060) Pseudomonas stutzeri A1501 5095509 YP_001173040.1 CDS cycL NC_009434.1 2775057 2775530 R Code: O; COG: COG3088; cytochrome c-type biogenesis protein CycL complement(2775057..2775530) Pseudomonas stutzeri A1501 5095510 YP_001173041.1 CDS ccmG NC_009434.1 2775527 2776042 R Code: OC; COG: COG0526; cytochrome C biogenesis protein CcmG complement(2775527..2776042) Pseudomonas stutzeri A1501 5095511 YP_001173042.1 CDS ccmF NC_009434.1 2776059 2778032 R Code: O; COG: COG1138; cytochrome C-type biogenesis protein CcmF complement(2776059..2778032) Pseudomonas stutzeri A1501 5095512 YP_001173043.1 CDS ccmE NC_009434.1 2778029 2778496 R CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE complement(2778029..2778496) Pseudomonas stutzeri A1501 5095513 YP_001173044.1 CDS ccmD NC_009434.1 2778493 2778669 R Code: U; COG: COG3114; cytochrome c-type biogenesis protein CcmD complement(2778493..2778669) Pseudomonas stutzeri A1501 5095514 YP_001173045.1 CDS ccmC NC_009434.1 2778666 2779421 R Code: O; COG: COG0755; heme exporter protein CcmC complement(2778666..2779421) Pseudomonas stutzeri A1501 5095515 YP_001173046.1 CDS ccmB NC_009434.1 2779509 2780180 R Code: O; COG: COG2386; heme exporter protein CcmB complement(2779509..2780180) Pseudomonas stutzeri A1501 5095516 YP_001173047.1 CDS ccmA NC_009434.1 2780177 2780812 R ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA complement(2780177..2780812) Pseudomonas stutzeri A1501 5095517 YP_001173048.1 CDS PST_2556 NC_009434.1 2781045 2782475 D hypothetical protein 2781045..2782475 Pseudomonas stutzeri A1501 5095518 YP_001173049.1 CDS PST_2557 NC_009434.1 2782472 2782804 D Code: S; COG: COG2257; FlhB domain-containing protein 2782472..2782804 Pseudomonas stutzeri A1501 5095519 YP_001173050.1 CDS PST_2558 NC_009434.1 2782785 2783225 R rhodanese-related sulfurtransferase complement(2782785..2783225) Pseudomonas stutzeri A1501 5095520 YP_001173051.1 CDS PST_2559 NC_009434.1 2783350 2783763 R methyl-accepting chemotaxis protein complement(2783350..2783763) Pseudomonas stutzeri A1501 5095521 YP_001173052.1 CDS cheW-2 NC_009434.1 2783767 2784246 R Code: NT; COG: COG0835; chemotaxis protein CheW complement(2783767..2784246) Pseudomonas stutzeri A1501 5095522 YP_001173053.1 CDS PST_2561 NC_009434.1 2784328 2785158 R CheW domain-containing protein complement(2784328..2785158) Pseudomonas stutzeri A1501 5095523 YP_001173054.1 CDS PST_2562 NC_009434.1 2785245 2786033 R Code: D; COG: COG1192; plasmid partitioning protein complement(2785245..2786033) Pseudomonas stutzeri A1501 5095524 YP_001173055.1 CDS motB NC_009434.1 2786120 2786956 R Homologous to MotB. These organism have both MotB and MotD. With MotC (a MotA homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. Either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; flagellar motor protein MotD complement(2786120..2786956) Pseudomonas stutzeri A1501 5095525 YP_001173056.1 CDS PST_2564 NC_009434.1 2786962 2787588 R Code: N; COG: COG1291; flagellar motor protein MotA complement(2786962..2787588) Pseudomonas stutzeri A1501 5095526 YP_001173057.1 CDS cheB NC_009434.1 2787702 2788820 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(2787702..2788820) Pseudomonas stutzeri A1501 5095527 YP_001173058.1 CDS cheA NC_009434.1 2788871 2791099 R Code: NT; COG: COG0643; chemotaxis histidine kinase CheA complement(2788871..2791099) Pseudomonas stutzeri A1501 5095528 YP_001173059.1 CDS cheZ NC_009434.1 2791111 2791905 R Code: NT; COG: COG3143; chemotaxis protein CheZ complement(2791111..2791905) Pseudomonas stutzeri A1501 5095529 YP_001173060.1 CDS cheY NC_009434.1 2791929 2792303 R Code: T; COG: COG0784; two-component response regulator CheY complement(2791929..2792303) Pseudomonas stutzeri A1501 5095530 YP_001173061.1 CDS fliA NC_009434.1 2792377 2793102 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(2792377..2793102) Pseudomonas stutzeri A1501 5095531 YP_001173062.1 CDS fleN NC_009434.1 2793120 2793947 R Code: D; COG: COG0455; flagellar number regulator FleN complement(2793120..2793947) Pseudomonas stutzeri A1501 5095532 YP_001173063.1 CDS flhF NC_009434.1 2794039 2795331 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(2794039..2795331) Pseudomonas stutzeri A1501 5095533 YP_001173064.1 CDS flhA NC_009434.1 2795347 2797377 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(2795347..2797377) Pseudomonas stutzeri A1501 5095534 YP_001173065.1 CDS sodC NC_009434.1 2797675 2798196 D Code: P; COG: COG2032; superoxide dismutase, Cu-Zn 2797675..2798196 Pseudomonas stutzeri A1501 5095535 YP_001173066.1 CDS flhB NC_009434.1 2798236 2799372 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB complement(2798236..2799372) Pseudomonas stutzeri A1501 5095536 YP_001173067.1 CDS fliR NC_009434.1 2799406 2800182 R FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR complement(2799406..2800182) Pseudomonas stutzeri A1501 5095537 YP_001173068.1 CDS fliQ NC_009434.1 2800187 2800456 R with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ complement(2800187..2800456) Pseudomonas stutzeri A1501 5095538 YP_001173069.1 CDS fliP NC_009434.1 2800469 2801068 R Code: NU; COG: COG1338; flagellar biosynthetic protein FliP complement(2800469..2801068) Pseudomonas stutzeri A1501 5095539 YP_001173070.1 CDS fliO NC_009434.1 2801245 2801664 R Code: N; COG: COG3190; flagellar protein FliO complement(2801245..2801664) Pseudomonas stutzeri A1501 5095540 YP_001173071.1 CDS fliN NC_009434.1 2801666 2802247 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein complement(2801666..2802247) Pseudomonas stutzeri A1501 5095541 YP_001173072.1 CDS fliM NC_009434.1 2802189 2803217 R with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM complement(2802189..2803217) Pseudomonas stutzeri A1501 5095542 YP_001173073.1 CDS fliL NC_009434.1 2803174 2803707 R interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL complement(2803174..2803707) Pseudomonas stutzeri A1501 5095543 YP_001173074.1 CDS fliK NC_009434.1 2803953 2805182 R Code: N; COG: COG3144; flagellar hook-length control protein FliK complement(2803953..2805182) Pseudomonas stutzeri A1501 5095544 YP_001173075.1 CDS PST_2583 NC_009434.1 2805342 2805692 R Code: T; COG: COG2198; Hpt domain-containing protein complement(2805342..2805692) Pseudomonas stutzeri A1501 5095545 YP_001173076.1 CDS PST_2584 NC_009434.1 2805720 2807321 R Code: TK; COG: COG2208; two-component response regulator complement(2805720..2807321) Pseudomonas stutzeri A1501 5095546 YP_001173077.1 CDS PST_2585 NC_009434.1 2807413 2807718 R Code: T; COG: COG1366; anti-sigma F factor antagonist complement(2807413..2807718) Pseudomonas stutzeri A1501 5095547 YP_001173078.1 CDS fliJ NC_009434.1 2807981 2808433 R rod/hook and filament chaperone; flagellar biosynthesis chaperone complement(2807981..2808433) Pseudomonas stutzeri A1501 5095548 YP_001173079.1 CDS fliI NC_009434.1 2808437 2809816 R involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase complement(2808437..2809816) Pseudomonas stutzeri A1501 5095549 YP_001173080.1 CDS fliH NC_009434.1 2809785 2810561 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(2809785..2810561) Pseudomonas stutzeri A1501 5095550 YP_001173081.1 CDS fliG NC_009434.1 2810581 2811597 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(2810581..2811597) Pseudomonas stutzeri A1501 5095551 YP_001173082.1 CDS fliF NC_009434.1 2811590 2813347 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(2811590..2813347) Pseudomonas stutzeri A1501 5095552 YP_001173083.1 CDS fliE NC_009434.1 2813388 2813717 R forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE complement(2813388..2813717) Pseudomonas stutzeri A1501 5095553 YP_001173084.1 CDS PST_2592 NC_009434.1 2813820 2815151 D Code: Q; COG: COG3135; benzoate transport protein 2813820..2815151 Pseudomonas stutzeri A1501 5095554 YP_001173085.1 CDS PST_2593 NC_009434.1 2815197 2815958 R Code: IQR; COG: COG1028; short chain dehydrogenase complement(2815197..2815958) Pseudomonas stutzeri A1501 5095555 YP_001173086.1 CDS PST_2594 NC_009434.1 2816177 2817181 D Code: R; COG: COG2130; oxidoreductase 2816177..2817181 Pseudomonas stutzeri A1501 5095556 YP_001173087.1 CDS pyrF NC_009434.1 2817238 2817774 R Code: F; COG: COG0284; orotidine 5'-phosphate decarboxylase complement(2817238..2817774) Pseudomonas stutzeri A1501 5095557 YP_001173088.1 CDS PST_2596 NC_009434.1 2818100 2818267 D hypothetical protein 2818100..2818267 Pseudomonas stutzeri A1501 5095558 YP_001173089.1 CDS PST_2597 NC_009434.1 2818382 2820949 D sensory box protein 2818382..2820949 Pseudomonas stutzeri A1501 5095559 YP_001173090.1 CDS PST_2598 NC_009434.1 2820969 2821478 R hypothetical protein complement(2820969..2821478) Pseudomonas stutzeri A1501 5095560 YP_001173091.1 CDS PST_2599 NC_009434.1 2821515 2822945 R Code: KE; COG: COG1167; GntR family transcriptional regulator complement(2821515..2822945) Pseudomonas stutzeri A1501 5095561 YP_001173092.1 CDS PST_2600 NC_009434.1 2823052 2823843 R Code: M; COG: COG2885; ompA family protein complement(2823052..2823843) Pseudomonas stutzeri A1501 5095562 YP_001173093.1 CDS PST_2601 NC_009434.1 2823846 2824202 R putative lipoprotein complement(2823846..2824202) Pseudomonas stutzeri A1501 5095563 YP_001173094.1 CDS PST_2603 NC_009434.1 2824211 2825113 R Code: ET; COG: COG0834; amino acid ABC transporter periplasmic protein complement(2824211..2825113) Pseudomonas stutzeri A1501 5095564 YP_001173096.1 CDS etfA NC_009434.1 2825159 2826088 R Code: C; COG: COG2025; electron transfer flavoprotein subunit alpha complement(2825159..2826088) Pseudomonas stutzeri A1501 5095566 YP_001173097.1 CDS etfB NC_009434.1 2826089 2826736 R Code: C; COG: COG2086; electron transfer flavoprotein subunit beta complement(2826089..2826736) Pseudomonas stutzeri A1501 5095567 YP_001173098.1 CDS PST_2606 NC_009434.1 2826849 2827049 R hypothetical protein complement(2826849..2827049) Pseudomonas stutzeri A1501 5095568 YP_001173099.1 CDS PST_2607 NC_009434.1 2827170 2828825 D Code: C; COG: COG0644; electron transfer flavoprotein-ubiquinone oxidoreductase 2827170..2828825 Pseudomonas stutzeri A1501 5095569 YP_001173100.1 CDS PST_2608 NC_009434.1 2828887 2829453 R Code: S; COG: COG3816; hypothetical protein complement(2828887..2829453) Pseudomonas stutzeri A1501 5095570 YP_001173101.1 CDS PST_2609 NC_009434.1 2829504 2830265 R putative lipoprotein complement(2829504..2830265) Pseudomonas stutzeri A1501 5095571 YP_001173102.1 CDS PST_2610 NC_009434.1 2830225 2831121 R Code: C; COG: COG1032; oxygen-independent coproporphyrinogen III oxidase complement(2830225..2831121) Pseudomonas stutzeri A1501 5095572 YP_001173103.1 CDS PST_2611 NC_009434.1 2831143 2831763 R Code: K; COG: COG1309; TetR family transcriptional regulator complement(2831143..2831763) Pseudomonas stutzeri A1501 5095573 YP_001173104.1 CDS PST_2612 NC_009434.1 2831838 2832971 D Code: E; COG: COG0520; class V aminotransferase 2831838..2832971 Pseudomonas stutzeri A1501 5095574 YP_001173105.1 CDS aroP1 NC_009434.1 2833189 2834583 R Code: E; COG: COG1113; aromatic amino acid transport protein AroP1 complement(2833189..2834583) Pseudomonas stutzeri A1501 5095575 YP_001173106.1 CDS PST_2614 NC_009434.1 2834663 2835448 R Code: L; COG: COG0084; TatD family deoxyribonuclease complement(2834663..2835448) Pseudomonas stutzeri A1501 5095576 YP_001173107.1 CDS pilZ NC_009434.1 2835561 2835917 R Code: NU; COG: COG3215; type 4 fimbrial biogenesis protein PilZ complement(2835561..2835917) Pseudomonas stutzeri A1501 5095577 YP_001173108.1 CDS holB NC_009434.1 2835949 2836935 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(2835949..2836935) Pseudomonas stutzeri A1501 5095578 YP_001173109.1 CDS tmk NC_009434.1 2836928 2837560 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(2836928..2837560) Pseudomonas stutzeri A1501 5095579 YP_001173110.1 CDS PST_2618 NC_009434.1 2837557 2838627 R Code: R; COG: COG1559; hypothetical protein complement(2837557..2838627) Pseudomonas stutzeri A1501 5095580 YP_001173111.1 CDS pabC NC_009434.1 2838624 2839445 R catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase complement(2838624..2839445) Pseudomonas stutzeri A1501 5095581 YP_001173112.2 CDS fabF NC_009434.1 2839442 2840686 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(2839442..2840686) Pseudomonas stutzeri A1501 5095582 YP_001173113.1 CDS acpP NC_009434.1 2840851 2841087 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2840851..2841087) Pseudomonas stutzeri A1501 5095583 YP_001173114.1 CDS fabG NC_009434.1 2841281 2842024 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(2841281..2842024) Pseudomonas stutzeri A1501 5095584 YP_001173115.1 CDS PST_2623 NC_009434.1 2842039 2842977 R Code: I; COG: COG0331; malonyl-CoA-[acyl-carrier-protein] transacylase complement(2842039..2842977) Pseudomonas stutzeri A1501 5095585 YP_001173116.1 CDS plsX NC_009434.1 2843039 2844079 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(2843039..2844079) Pseudomonas stutzeri A1501 5095586 YP_001173117.1 CDS rpmF NC_009434.1 2844113 2844295 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2844113..2844295) Pseudomonas stutzeri A1501 5095587 YP_001173118.1 CDS PST_2626 NC_009434.1 2844308 2844835 R Code: R; COG: COG1399; metal-binding protein complement(2844308..2844835) Pseudomonas stutzeri A1501 5095588 YP_001173119.1 CDS maf-1 NC_009434.1 2844940 2845518 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2844940..2845518 Pseudomonas stutzeri A1501 5095589 YP_001173120.1 CDS sppA NC_009434.1 2845535 2846518 R Code: OU; COG: COG0616; putative peptidase complement(2845535..2846518) Pseudomonas stutzeri A1501 5095590 YP_001173121.1 CDS PST_2629 NC_009434.1 2846508 2847194 R Code: R; COG: COG0546; HAD superfamily hydrolase complement(2846508..2847194) Pseudomonas stutzeri A1501 5095591 YP_001173122.1 CDS rluC NC_009434.1 2847187 2847987 R Code: J; COG: COG0564; ribosomal large subunit pseudouridine synthase C complement(2847187..2847987) Pseudomonas stutzeri A1501 5095592 YP_001173123.1 CDS rne NC_009434.1 2848647 2851859 D ribonuclease E 2848647..2851859 Pseudomonas stutzeri A1501 5095593 YP_001173124.1 CDS murB NC_009434.1 2852077 2853096 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(2852077..2853096) Pseudomonas stutzeri A1501 5095594 YP_001173125.1 CDS PST_2633 NC_009434.1 2853093 2853560 R Code: T; COG: COG0394; protein-tyrosine-phosphatase complement(2853093..2853560) Pseudomonas stutzeri A1501 5095595 YP_001173126.1 CDS kdsB NC_009434.1 2853562 2854185 R Code: M; COG: COG1212; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(2853562..2854185) Pseudomonas stutzeri A1501 5095596 YP_001173127.1 CDS PST_2635 NC_009434.1 2854323 2854508 R Code: S; COG: COG2835; hypothetical protein complement(2854323..2854508) Pseudomonas stutzeri A1501 5095597 YP_001173128.1 CDS lpxK NC_009434.1 2854554 2855558 R transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(2854554..2855558) Pseudomonas stutzeri A1501 5095598 YP_001173129.1 CDS PST_2637 NC_009434.1 2855558 2855986 R Code: U; COG: COG0848; biopolymer ExbD/TolR family transporter complement(2855558..2855986) Pseudomonas stutzeri A1501 5095599 YP_001173130.1 CDS PST_2638 NC_009434.1 2855983 2856582 R Code: U; COG: COG0811; MotA/TolQ/ExbB proton channel family protein complement(2855983..2856582) Pseudomonas stutzeri A1501 5095600 YP_001173131.1 CDS PST_2639 NC_009434.1 2856687 2858912 R Code: R; COG: COG0658; DNA internalization-related competence protein ComEC/Rec2 complement(2856687..2858912) Pseudomonas stutzeri A1501 5095601 YP_001173132.1 CDS PST_2640 NC_009434.1 2859057 2859572 D Code: S; COG: COG3216; hypothetical protein 2859057..2859572 Pseudomonas stutzeri A1501 5095602 YP_001173133.1 CDS lolE NC_009434.1 2859585 2860709 R Code: M; COG: COG4591; lipoprotein releasing system transmembrane protein LolE complement(2859585..2860709) Pseudomonas stutzeri A1501 5095603 YP_001173134.1 CDS PST_2642 NC_009434.1 2860829 2861542 R Code: V; COG: COG1136; lipoprotein releasing system, ATP-binding protein LolD complement(2860829..2861542) Pseudomonas stutzeri A1501 5095604 YP_001173135.1 CDS lolC NC_009434.1 2861535 2862830 R Code: M; COG: COG4591; lipoprotein releasing system, permease complement(2861535..2862830) Pseudomonas stutzeri A1501 5095605 YP_001173136.1 CDS PST_2643 NC_009434.1 2862815 2863450 D hypothetical protein 2862815..2863450 Pseudomonas stutzeri A1501 5095606 YP_001173137.1 CDS PST_2645 NC_009434.1 2863454 2863762 D hypothetical protein 2863454..2863762 Pseudomonas stutzeri A1501 5095607 YP_001173138.1 CDS PST_2646 NC_009434.1 2863759 2864481 D Code: C; COG: COG0584; phosphodiesterase 2863759..2864481 Pseudomonas stutzeri A1501 5095608 YP_001173139.1 CDS sthA NC_009434.1 2864626 2866020 R catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase complement(2864626..2866020) Pseudomonas stutzeri A1501 5095609 YP_001173140.1 CDS PST_2648 NC_009434.1 2866165 2866392 R Code: S; COG: COG2991; hypothetical protein complement(2866165..2866392) Pseudomonas stutzeri A1501 5095610 YP_001173141.1 CDS PST_2649 NC_009434.1 2866389 2867438 R Code: H; COG: COG1477; thiamine biosynthesis lipoprotein complement(2866389..2867438) Pseudomonas stutzeri A1501 5095611 YP_001173142.1 CDS nqrF NC_009434.1 2867440 2868663 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F complement(2867440..2868663) Pseudomonas stutzeri A1501 5095612 YP_001173143.1 CDS nqrE NC_009434.1 2868679 2869287 R Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E complement(2868679..2869287) Pseudomonas stutzeri A1501 5095613 YP_001173144.1 CDS nqrD NC_009434.1 2869287 2869955 R Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D complement(2869287..2869955) Pseudomonas stutzeri A1501 5095614 YP_001173145.1 CDS nqrC NC_009434.1 2869958 2870752 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C complement(2869958..2870752) Pseudomonas stutzeri A1501 5095615 YP_001173146.1 CDS nqrB NC_009434.1 2870745 2871956 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B complement(2870745..2871956) Pseudomonas stutzeri A1501 5095616 YP_001173147.1 CDS nqrA NC_009434.1 2871960 2873270 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A complement(2871960..2873270) Pseudomonas stutzeri A1501 5095617 YP_001173148.1 CDS gap-2 NC_009434.1 2873633 2875084 R catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase complement(2873633..2875084) Pseudomonas stutzeri A1501 5095618 YP_001173149.1 CDS mfd NC_009434.1 2875244 2878690 D Code: LK; COG: COG1197; transcription-repair coupling factor 2875244..2878690 Pseudomonas stutzeri A1501 5095619 YP_001173150.1 CDS PST_2658 NC_009434.1 2878691 2879209 D hypothetical protein 2878691..2879209 Pseudomonas stutzeri A1501 5095620 YP_001173151.1 CDS PST_2659 NC_009434.1 2879269 2881590 D Code: KL; COG: COG0553; helicase/SNF2 domain-containing protein 2879269..2881590 Pseudomonas stutzeri A1501 5095621 YP_001173152.1 CDS PST_2660 NC_009434.1 2881724 2882293 D hypothetical protein 2881724..2882293 Pseudomonas stutzeri A1501 5095622 YP_001173153.1 CDS PST_2661 NC_009434.1 2882435 2883451 D Code: J; COG: COG1236; mRNA 3'-end processing factor 2882435..2883451 Pseudomonas stutzeri A1501 5095623 YP_001173154.1 CDS PST_2662 NC_009434.1 2883507 2885213 D catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 2883507..2885213 Pseudomonas stutzeri A1501 5095624 YP_001173155.1 CDS PST_2663 NC_009434.1 2885210 2887906 D Code: R; COG: COG1201; DEAD/DEAH box helicase 2885210..2887906 Pseudomonas stutzeri A1501 5095625 YP_001173156.1 CDS PST_2664 NC_009434.1 2888031 2888627 D Code: R; COG: COG1407; ICC-like phosphoesterase 2888031..2888627 Pseudomonas stutzeri A1501 5095626 YP_001173157.1 CDS PST_2665 NC_009434.1 2888605 2888838 R hypothetical protein complement(2888605..2888838) Pseudomonas stutzeri A1501 5095627 YP_001173158.1 CDS PST_2666 NC_009434.1 2889040 2890374 D Code: R; COG: COG2312; protein-L-isoaspartate O-methyltransferase 2889040..2890374 Pseudomonas stutzeri A1501 5095628 YP_001173159.1 CDS PST_2667 NC_009434.1 2890706 2891245 R Code: S; COG: COG3122; hypothetical protein complement(2890706..2891245) Pseudomonas stutzeri A1501 5095629 YP_001173160.1 CDS mazG NC_009434.1 2891360 2892064 R functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase complement(2891360..2892064) Pseudomonas stutzeri A1501 5095630 YP_001173161.1 CDS relA NC_009434.1 2892358 2894601 R Code: TK; COG: COG0317; GTP pyrophosphokinase complement(2892358..2894601) Pseudomonas stutzeri A1501 5095631 YP_001173162.1 CDS rumA NC_009434.1 2894707 2896059 R in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase complement(2894707..2896059) Pseudomonas stutzeri A1501 5095632 YP_001173163.1 CDS cysM NC_009434.1 2896102 2897076 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(2896102..2897076) Pseudomonas stutzeri A1501 5095633 YP_001173164.1 CDS PST_2672 NC_009434.1 2897108 2898001 R specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein complement(2897108..2898001) Pseudomonas stutzeri A1501 5095634 YP_001173165.1 CDS PST_2673 NC_009434.1 2898202 2898765 D Code: S; COG: COG2860; hypothetical protein 2898202..2898765 Pseudomonas stutzeri A1501 5095635 YP_001173166.1 CDS gacS NC_009434.1 2898898 2901618 D sensor histidine kinase/response regulator GacS 2898898..2901618 Pseudomonas stutzeri A1501 5095636 YP_001173167.1 CDS mnmC NC_009434.1 2901685 2903667 D catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 2901685..2903667 Pseudomonas stutzeri A1501 5095637 YP_001173168.1 CDS PST_2676 NC_009434.1 2903771 2904328 D glutamate synthase domain-containing 2 2903771..2904328 Pseudomonas stutzeri A1501 5095638 YP_001173169.1 CDS PST_2677 NC_009434.1 2904380 2905252 D Code: R; COG: COG0730; hypothetical protein 2904380..2905252 Pseudomonas stutzeri A1501 5095639 YP_001173170.1 CDS PST_2678 NC_009434.1 2905261 2905494 R Code: S; COG: COG5457; hypothetical protein complement(2905261..2905494) Pseudomonas stutzeri A1501 5095640 YP_001173171.1 CDS PST_2679 NC_009434.1 2905589 2906443 D Code: K; COG: COG0583; LysR family transcriptional regulator 2905589..2906443 Pseudomonas stutzeri A1501 5095641 YP_001173172.1 CDS PST_2680 NC_009434.1 2906449 2906829 R hypothetical protein complement(2906449..2906829) Pseudomonas stutzeri A1501 5095642 YP_001173173.1 CDS PST_2681 NC_009434.1 2906972 2907268 D hypothetical protein 2906972..2907268 Pseudomonas stutzeri A1501 5095643 YP_001173174.1 CDS srmB NC_009434.1 2907285 2908652 R Code: LKJ; COG: COG0513; ATP-dependent RNA helicase SrmB complement(2907285..2908652) Pseudomonas stutzeri A1501 5095644 YP_001173175.1 CDS PST_2683 NC_009434.1 2908767 2909195 D integral membrane protein 2908767..2909195 Pseudomonas stutzeri A1501 5095645 YP_001173176.1 CDS PST_2684 NC_009434.1 2909220 2910527 D Code: K; COG: COG0583; LysR family transcriptional regulator 2909220..2910527 Pseudomonas stutzeri A1501 5095646 YP_001173177.1 CDS ppiA NC_009434.1 2910496 2911110 D Code: O; COG: COG0652; peptidyl-prolyl cis-trans isomerase A 2910496..2911110 Pseudomonas stutzeri A1501 5095647 YP_001173178.1 CDS PST_2686 NC_009434.1 2911208 2911630 D dioxygenase 2911208..2911630 Pseudomonas stutzeri A1501 5095648 YP_001173179.1 CDS PST_2687 NC_009434.1 2911639 2912769 R Code: S; COG: COG3146; hypothetical protein complement(2911639..2912769) Pseudomonas stutzeri A1501 5095649 YP_001173180.1 CDS oprO NC_009434.1 2912855 2914144 R Code: P; COG: COG3746; outer membrane porin OprO complement(2912855..2914144) Pseudomonas stutzeri A1501 5095650 YP_001173181.1 CDS PST_2689 NC_009434.1 2914313 2915122 R Code: H; COG: COG1179; ThiF family protein complement(2914313..2915122) Pseudomonas stutzeri A1501 5095651 YP_001173182.1 CDS dapE NC_009434.1 2915251 2916399 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2915251..2916399 Pseudomonas stutzeri A1501 5095652 YP_001173183.1 CDS rrmA NC_009434.1 2916444 2917199 D Code: QR; COG: COG0500; rRNA methyltransferase 2916444..2917199 Pseudomonas stutzeri A1501 5095653 YP_001173184.1 CDS PST_2692 NC_009434.1 2917259 2917630 D hypothetical protein 2917259..2917630 Pseudomonas stutzeri A1501 5095654 YP_001173185.1 CDS PST_2693 NC_009434.1 2917759 2918169 R cold shock protein CspA complement(2917759..2918169) Pseudomonas stutzeri A1501 5095655 YP_001173186.1 CDS PST_2694 NC_009434.1 2918169 2920004 R Code: N; COG: COG3225; ABC transporter involved in gliding motility, auxiliary component complement(2918169..2920004) Pseudomonas stutzeri A1501 5095656 YP_001173187.1 CDS PST_2695 NC_009434.1 2920014 2920745 R Code: R; COG: COG1277; ABC transporter permease complement(2920014..2920745) Pseudomonas stutzeri A1501 5095657 YP_001173188.1 CDS PST_2697 NC_009434.1 2920742 2921665 R Code: V; COG: COG1131; ABC transporter ATP-binding protein complement(2920742..2921665) Pseudomonas stutzeri A1501 5095658 YP_001173189.1 CDS PST_2696 NC_009434.1 2921624 2922394 D IAA acetyltransferase 2921624..2922394 Pseudomonas stutzeri A1501 5095659 YP_001173190.1 CDS PST_2698 NC_009434.1 2922471 2923040 D Code: J; COG: COG1670; acetyltransferase 2922471..2923040 Pseudomonas stutzeri A1501 5095660 YP_001173191.1 CDS PST_2699 NC_009434.1 2923083 2923865 D Code: V; COG: COG2602; beta-lactamase 2923083..2923865 Pseudomonas stutzeri A1501 5095661 YP_001173192.1 CDS PST_2700 NC_009434.1 2923933 2924637 D Code: QR; COG: COG0500; SAM-dependent methyltransferase 2923933..2924637 Pseudomonas stutzeri A1501 5095662 YP_001173193.1 CDS PST_2701 NC_009434.1 2924627 2924971 D hypothetical protein 2924627..2924971 Pseudomonas stutzeri A1501 5095663 YP_001173194.1 CDS PST_2702 NC_009434.1 2925044 2925457 D Code: R; COG: COG5485; ester cyclase 2925044..2925457 Pseudomonas stutzeri A1501 5095664 YP_001173195.1 CDS plsB NC_009434.1 2925546 2928104 D PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 2925546..2928104 Pseudomonas stutzeri A1501 5095665 YP_001173196.1 CDS PST_2705 NC_009434.1 2928062 2928673 R Code: KR; COG: COG0454; acetyltransferase complement(2928062..2928673) Pseudomonas stutzeri A1501 5095666 YP_001173197.1 CDS PST_2704 NC_009434.1 2928672 2929343 D hypothetical protein 2928672..2929343 Pseudomonas stutzeri A1501 5095667 YP_001173198.1 CDS dsbG NC_009434.1 2929461 2930228 R Involved in disulfide bond formation; disulfide isomerase/thiol-disulfide oxidase complement(2929461..2930228) Pseudomonas stutzeri A1501 5095668 YP_001173199.1 CDS PST_2707 NC_009434.1 2930225 2931040 R Code: OC; COG: COG0526; thiol:disulfide interchange protein dsbE complement(2930225..2931040) Pseudomonas stutzeri A1501 5095669 YP_001173200.1 CDS dsbD-2 NC_009434.1 2931040 2932776 R Code: OC; COG: COG4232; thiol:disulfide interchange protein DsbD complement(2931040..2932776) Pseudomonas stutzeri A1501 5095670 YP_001173201.1 CDS PST_2709 NC_009434.1 2932915 2933592 D Code: TK; COG: COG0745; two-component response regulator 2932915..2933592 Pseudomonas stutzeri A1501 5095671 YP_001173202.1 CDS PST_2710 NC_009434.1 2933589 2934911 D Code: T; COG: COG0642; two-component sensor 2933589..2934911 Pseudomonas stutzeri A1501 5095672 YP_001173203.1 CDS PST_2711 NC_009434.1 2934912 2936276 R Code: T; COG: COG0642; sensor protein CopS complement(2934912..2936276) Pseudomonas stutzeri A1501 5095673 YP_001173204.1 CDS PST_2712 NC_009434.1 2936273 2937004 R Code: TK; COG: COG0745; transcriptional activator CopR complement(2936273..2937004) Pseudomonas stutzeri A1501 5095674 YP_001173205.1 CDS PST_2713 NC_009434.1 2937166 2937429 D Code: P; COG: COG2608; copper-binding protein 2937166..2937429 Pseudomonas stutzeri A1501 5095675 YP_001173206.1 CDS PST_2714 NC_009434.1 2937450 2937896 D Code: R; COG: COG3019; metal-binding protein 2937450..2937896 Pseudomonas stutzeri A1501 5095676 YP_001173207.1 CDS pcoA NC_009434.1 2938501 2939958 D Code: Q; COG: COG2132; copper resistance protein A 2938501..2939958 Pseudomonas stutzeri A1501 5095677 YP_001173208.1 CDS PST_2716 NC_009434.1 2939970 2940287 D hypothetical protein 2939970..2940287 Pseudomonas stutzeri A1501 5095678 YP_001173209.1 CDS pcoB NC_009434.1 2940349 2941179 D Code: P; COG: COG3667; copper resistance protein B 2940349..2941179 Pseudomonas stutzeri A1501 5095679 YP_001173210.1 CDS PST_2718 NC_009434.1 2941190 2941846 D cytochrome c family protein 2941190..2941846 Pseudomonas stutzeri A1501 5095680 YP_001173211.1 CDS PST_2719 NC_009434.1 2941859 2942398 R hypothetical protein complement(2941859..2942398) Pseudomonas stutzeri A1501 5095681 YP_001173212.1 CDS PST_2720 NC_009434.1 2942576 2943061 D acetyltransferase (GNAT) family protein 2942576..2943061 Pseudomonas stutzeri A1501 5095682 YP_001173213.1 CDS PST_2721 NC_009434.1 2943100 2943699 R stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA complement(2943100..2943699) Pseudomonas stutzeri A1501 5095683 YP_001173214.1 CDS PST_2722 NC_009434.1 2943770 2944468 R Code: R; COG: COG1741; pirin-related protein complement(2943770..2944468) Pseudomonas stutzeri A1501 5095684 YP_001173215.1 CDS PST_2723 NC_009434.1 2944848 2945039 D hypothetical protein 2944848..2945039 Pseudomonas stutzeri A1501 5095685 YP_001173216.1 CDS mgoH NC_009434.1 2945083 2947641 R necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH complement(2945083..2947641) Pseudomonas stutzeri A1501 5095686 YP_001173217.1 CDS mdoG NC_009434.1 2947652 2949148 R involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G complement(2947652..2949148) Pseudomonas stutzeri A1501 5095687 YP_001173218.1 CDS bglX NC_009434.1 2949362 2951653 R Code: G; COG: COG1472; beta-glucosidase complement(2949362..2951653) Pseudomonas stutzeri A1501 5095688 YP_001173219.1 CDS PST_2727 NC_009434.1 2951750 2952529 R Code: R; COG: COG0384; PhzF family phenazine biosynthesis protein complement(2951750..2952529) Pseudomonas stutzeri A1501 5095689 YP_001173220.1 CDS PST_2728 NC_009434.1 2952674 2953384 R Code: M; COG: COG1346; hypothetical protein complement(2952674..2953384) Pseudomonas stutzeri A1501 5095690 YP_001173221.1 CDS PST_2729 NC_009434.1 2953381 2953746 R Code: R; COG: COG1380; LrgA family protein complement(2953381..2953746) Pseudomonas stutzeri A1501 5095691 YP_001173222.1 CDS PST_2730 NC_009434.1 2954047 2955465 D Code: C; COG: COG0348; iron-sulfur protein 2954047..2955465 Pseudomonas stutzeri A1501 5095692 YP_001173223.1 CDS PST_2731 NC_009434.1 2955473 2956909 D Code: KE; COG: COG1167; GntR family transcriptional regulator 2955473..2956909 Pseudomonas stutzeri A1501 5095693 YP_001173224.1 CDS PST_2732 NC_009434.1 2956919 2958343 R sensory box protein complement(2956919..2958343) Pseudomonas stutzeri A1501 5095694 YP_001173225.1 CDS PST_2733 NC_009434.1 2958393 2959235 R Code: R; COG: COG0491; Zn-dependent hydrolase complement(2958393..2959235) Pseudomonas stutzeri A1501 5095695 YP_001173226.1 CDS PST_2735 NC_009434.1 2959181 2959909 R Code: O; COG: COG0625; glutathione S-transferase complement(2959181..2959909) Pseudomonas stutzeri A1501 5095696 YP_001173227.1 CDS PST_2734 NC_009434.1 2959908 2960468 D Code: K; COG: COG1309; transcriptional regulator 2959908..2960468 Pseudomonas stutzeri A1501 5095697 YP_001173228.1 CDS PST_2736 NC_009434.1 2960501 2963572 R Code: V; COG: COG0841; RND efflux transporter complement(2960501..2963572) Pseudomonas stutzeri A1501 5095698 YP_001173229.1 CDS PST_2738 NC_009434.1 2963577 2964773 R Code: M; COG: COG0845; RND efflux membrane fusion protein complement(2963577..2964773) Pseudomonas stutzeri A1501 5095699 YP_001173230.1 CDS PST_2737 NC_009434.1 2964772 2965407 D Code: K; COG: COG1309; transcriptional regulator 2964772..2965407 Pseudomonas stutzeri A1501 5095700 YP_001173231.1 CDS PST_2739 NC_009434.1 2965438 2966214 R Code: QR; COG: COG0500; SAM-dependent methyltransferase complement(2965438..2966214) Pseudomonas stutzeri A1501 5095701 YP_001173232.1 CDS PST_2740 NC_009434.1 2966286 2966978 R Code: S; COG: COG3921; hypothetical protein complement(2966286..2966978) Pseudomonas stutzeri A1501 5095702 YP_001173233.1 CDS PST_2741 NC_009434.1 2967047 2967790 R Code: S; COG: COG1801; hypothetical protein complement(2967047..2967790) Pseudomonas stutzeri A1501 5095703 YP_001173234.1 CDS PST_2742 NC_009434.1 2967916 2968263 R hypothetical protein complement(2967916..2968263) Pseudomonas stutzeri A1501 5095704 YP_001173235.1 CDS PST_2743 NC_009434.1 2968325 2969053 R Code: O; COG: COG1214; metal-dependent protease molecular chaperone complement(2968325..2969053) Pseudomonas stutzeri A1501 5095705 YP_001173236.2 CDS adk NC_009434.1 2969134 2969781 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(2969134..2969781) Pseudomonas stutzeri A1501 5095706 YP_001173237.1 CDS ppc NC_009434.1 2970024 2972663 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(2970024..2972663) Pseudomonas stutzeri A1501 5095707 YP_001173238.1 CDS PST_2746 NC_009434.1 2972920 2973261 D hypothetical protein 2972920..2973261 Pseudomonas stutzeri A1501 5095708 YP_001173239.1 CDS PST_2747 NC_009434.1 2973539 2973931 D chromosome segregation ATPase 2973539..2973931 Pseudomonas stutzeri A1501 5095709 YP_001173240.1 CDS PST_2748 NC_009434.1 2973982 2974764 D Code: M; COG: COG2885; OmpA family protein 2973982..2974764 Pseudomonas stutzeri A1501 5095710 YP_001173241.1 CDS PST_2749 NC_009434.1 2974850 2975206 R putative lipoprotein complement(2974850..2975206) Pseudomonas stutzeri A1501 5095711 YP_001173242.1 CDS PST_2750 NC_009434.1 2975237 2975983 R Code: S; COG: COG2013; hypothetical protein complement(2975237..2975983) Pseudomonas stutzeri A1501 5095712 YP_001173243.1 CDS PST_2751 NC_009434.1 2976041 2976463 R hypothetical protein complement(2976041..2976463) Pseudomonas stutzeri A1501 5095713 YP_001173244.1 CDS PST_2752 NC_009434.1 2976460 2976699 R hypothetical protein complement(2976460..2976699) Pseudomonas stutzeri A1501 5095714 YP_001173245.1 CDS PST_2753 NC_009434.1 2976743 2978038 R Code: S; COG: COG3930; hypothetical protein complement(2976743..2978038) Pseudomonas stutzeri A1501 5095715 YP_001173246.1 CDS lysS NC_009434.1 2978129 2979409 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(2978129..2979409) Pseudomonas stutzeri A1501 5095716 YP_001173247.1 CDS PST_2755 NC_009434.1 2979695 2980507 R Code: J; COG: COG1186; peptide chain release factor 1 complement(2979695..2980507) Pseudomonas stutzeri A1501 5095717 YP_001173248.1 CDS PST_2756 NC_009434.1 2980915 2981631 R Code: S; COG: COG2979; hypothetical protein complement(2980915..2981631) Pseudomonas stutzeri A1501 5095718 YP_001173249.1 CDS PST_2757 NC_009434.1 2981666 2982775 R Code: C; COG: COG1902; FMN oxidoreductase complement(2981666..2982775) Pseudomonas stutzeri A1501 5095719 YP_001173250.1 CDS PST_2758 NC_009434.1 2982869 2985253 R Code: C; COG: COG0243; molybdopterin-binding oxidoreductase complement(2982869..2985253) Pseudomonas stutzeri A1501 5095720 YP_001173251.1 CDS recJ NC_009434.1 2985091 2986677 R Code: L; COG: COG0608; single-stranded-DNA-specific exonuclease RecJ complement(2985091..2986677) Pseudomonas stutzeri A1501 5095721 YP_001173252.1 CDS PST_2760 NC_009434.1 2986833 2987237 R Code: K; COG: COG5631; transcriptional regulator complement(2986833..2987237) Pseudomonas stutzeri A1501 5095722 YP_001173253.1 CDS PST_2761 NC_009434.1 2987616 2988290 D Code: R; COG: COG1540; putative lactam utilization protein 2987616..2988290 Pseudomonas stutzeri A1501 5095723 YP_001173254.1 CDS PST_2762 NC_009434.1 2988287 2988994 D Code: E; COG: COG2049; allophanate hydrolase subunit 1 2988287..2988994 Pseudomonas stutzeri A1501 5095724 YP_001173255.1 CDS PST_2763 NC_009434.1 2988991 2989917 D Code: E; COG: COG1984; urea amidolyase-related protein 2988991..2989917 Pseudomonas stutzeri A1501 5095725 YP_001173256.1 CDS PST_2764 NC_009434.1 2989923 2990720 D Code: S; COG: COG4336; hypothetical protein 2989923..2990720 Pseudomonas stutzeri A1501 5095726 YP_001173257.1 CDS PST_2765 NC_009434.1 2990759 2992048 D Code: P; COG: COG1914; branched chain amino acids transporter 2990759..2992048 Pseudomonas stutzeri A1501 5095727 YP_001173258.1 CDS PST_2766 NC_009434.1 2992070 2992609 R Code: S; COG: COG4681; hypothetical protein complement(2992070..2992609) Pseudomonas stutzeri A1501 5095728 YP_001173259.1 CDS PST_2767 NC_009434.1 2992651 2993841 R diguanylate cyclase complement(2992651..2993841) Pseudomonas stutzeri A1501 5095729 YP_001173260.1 CDS PST_2768 NC_009434.1 2993875 2994414 R hypothetical protein complement(2993875..2994414) Pseudomonas stutzeri A1501 5095730 YP_001173261.1 CDS bfrB NC_009434.1 2994512 2994982 D Code: P; COG: COG2193; bacterioferritin 2994512..2994982 Pseudomonas stutzeri A1501 5095731 YP_001173262.1 CDS fklB-2 NC_009434.1 2995053 2995787 R Code: O; COG: COG0545; peptidyl-prolyl cis-trans isomerase, FKBP-type complement(2995053..2995787) Pseudomonas stutzeri A1501 5095732 YP_001173263.1 CDS rdgC NC_009434.1 2996389 2997345 D Required for efficient pilin antigenic variation; recombination associated protein 2996389..2997345 Pseudomonas stutzeri A1501 5095735 YP_001173264.1 CDS PST_2774 NC_009434.1 2997386 2998795 R Code: GEPR; COG: COG0477; acyltransferase complement(2997386..2998795) Pseudomonas stutzeri A1501 5095736 YP_001173265.1 CDS PST_2775 NC_009434.1 2998792 2999118 R Code: S; COG: COG4392; hypothetical protein complement(2998792..2999118) Pseudomonas stutzeri A1501 5095737 YP_001173266.1 CDS azlC NC_009434.1 2999115 2999831 R Code: E; COG: COG1296; branched-chain amino acid transport protein AzlC complement(2999115..2999831) Pseudomonas stutzeri A1501 5095738 YP_001173267.1 CDS PST_2777 NC_009434.1 2999985 3000545 R Code: J; COG: COG1670; acetyltransferase complement(2999985..3000545) Pseudomonas stutzeri A1501 5095739 YP_001173268.1 CDS PST_2778 NC_009434.1 3000665 3000826 D hypothetical protein 3000665..3000826 Pseudomonas stutzeri A1501 5095740 YP_001173269.1 CDS PST_2779 NC_009434.1 3000823 3004290 D two-component sensor 3000823..3004290 Pseudomonas stutzeri A1501 5095741 YP_001173270.1 CDS PST_2780 NC_009434.1 3004688 3005830 D Code: S; COG: COG3174; hypothetical protein 3004688..3005830 Pseudomonas stutzeri A1501 5095742 YP_001173271.1 CDS PST_2781 NC_009434.1 3005846 3007318 R Code: S; COG: COG1322; hypothetical protein complement(3005846..3007318) Pseudomonas stutzeri A1501 5095743 YP_001173272.1 CDS PST_2782 NC_009434.1 3007387 3007803 R hypothetical protein complement(3007387..3007803) Pseudomonas stutzeri A1501 5095744 YP_001173273.1 CDS PST_2783 NC_009434.1 3008176 3010866 D hypothetical protein 3008176..3010866 Pseudomonas stutzeri A1501 5095745 YP_001173274.1 CDS PST_2784 NC_009434.1 3010850 3011428 D hypothetical protein 3010850..3011428 Pseudomonas stutzeri A1501 5095746 YP_001173275.1 CDS PST_2785 NC_009434.1 3011481 3011819 R hypothetical protein complement(3011481..3011819) Pseudomonas stutzeri A1501 5095747 YP_001173276.1 CDS polB NC_009434.1 3011862 3014222 R Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II complement(3011862..3014222) Pseudomonas stutzeri A1501 5095748 YP_001173277.1 CDS PST_2788 NC_009434.1 3014576 3015451 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(3014576..3015451) Pseudomonas stutzeri A1501 5095750 YP_001173278.1 CDS PST_2789 NC_009434.1 3015540 3016640 R Code: M; COG: COG3317; putative lipoprotein complement(3015540..3016640) Pseudomonas stutzeri A1501 5095751 YP_001173279.1 CDS dapA NC_009434.1 3016657 3017535 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(3016657..3017535) Pseudomonas stutzeri A1501 5095752 YP_001173280.1 CDS PST_2791 NC_009434.1 3017825 3018322 D Code: E; COG: COG2716; glycine cleavage system transcriptional repressor 3017825..3018322 Pseudomonas stutzeri A1501 5095753 YP_001173281.1 CDS bcp NC_009434.1 3018337 3018810 D Code: O; COG: COG1225; bacterioferritin comigratory protein 3018337..3018810 Pseudomonas stutzeri A1501 5095754 YP_001173282.1 CDS PST_2793 NC_009434.1 3018847 3019677 R Code: R; COG: COG0628; PerM family membrane protein complement(3018847..3019677) Pseudomonas stutzeri A1501 5095755 YP_001173283.1 CDS PST_2794 NC_009434.1 3019945 3020196 R Code: O; COG: COG0425; SirA domain-containing protein complement(3019945..3020196) Pseudomonas stutzeri A1501 5095756 YP_001173284.1 CDS PST_2795 NC_009434.1 3020307 3021737 D Code: R; COG: COG4783; hypothetical protein 3020307..3021737 Pseudomonas stutzeri A1501 5095757 YP_001173285.1 CDS nadA NC_009434.1 3021846 3023186 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(3021846..3023186) Pseudomonas stutzeri A1501 5095758 YP_001173286.1 CDS PST_2797 NC_009434.1 3023138 3024613 R Code: C; COG: COG0427; acetyl-CoA hydrolase complement(3023138..3024613) Pseudomonas stutzeri A1501 5095759 YP_001173287.1 CDS exsB NC_009434.1 3025017 3025742 R Code: R; COG: COG0603; ExsB protein complement(3025017..3025742) Pseudomonas stutzeri A1501 5095761 YP_001173288.1 CDS PST_2800 NC_009434.1 3025726 3026367 R Code: O; COG: COG0602; radical activating enzyme complement(3025726..3026367) Pseudomonas stutzeri A1501 5095762 YP_001173289.1 CDS PST_2801 NC_009434.1 3026487 3027299 R Code: S; COG: COG1729; hypothetical protein complement(3026487..3027299) Pseudomonas stutzeri A1501 5095763 YP_001173290.1 CDS oprL NC_009434.1 3027306 3027809 R Code: M; COG: COG2885; peptidoglycan-associated lipoprotein OprL complement(3027306..3027809) Pseudomonas stutzeri A1501 5095764 YP_001173291.1 CDS tolB NC_009434.1 3027858 3029012 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(3027858..3029012) Pseudomonas stutzeri A1501 5095765 YP_001173292.1 CDS tolA NC_009434.1 3029156 3030154 R biopolymer transport protein TolA complement(3029156..3030154) Pseudomonas stutzeri A1501 5095766 YP_001173293.1 CDS tolR NC_009434.1 3030154 3030594 R Code: U; COG: COG0848; TolR protein complement(3030154..3030594) Pseudomonas stutzeri A1501 5095767 YP_001173294.1 CDS tolQ NC_009434.1 3030606 3031271 R Code: U; COG: COG0811; TolQ protein complement(3030606..3031271) Pseudomonas stutzeri A1501 5095768 YP_001173295.1 CDS PST_2807 NC_009434.1 3031301 3031771 R Code: R; COG: COG0824; thioesterase family protein complement(3031301..3031771) Pseudomonas stutzeri A1501 5095769 YP_001173296.1 CDS ruvB NC_009434.1 3031796 3032848 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(3031796..3032848) Pseudomonas stutzeri A1501 5095770 YP_001173297.1 CDS ruvA NC_009434.1 3032852 3033457 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(3032852..3033457) Pseudomonas stutzeri A1501 5095771 YP_001173298.1 CDS ruvC NC_009434.1 3033518 3034042 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(3033518..3034042) Pseudomonas stutzeri A1501 5095772 YP_001173299.1 CDS PST_2811 NC_009434.1 3034204 3034953 R Code: S; COG: COG0217; hypothetical protein complement(3034204..3034953) Pseudomonas stutzeri A1501 5095773 YP_001173300.1 CDS aspS NC_009434.1 3035104 3036918 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(3035104..3036918) Pseudomonas stutzeri A1501 5095774 YP_001173301.1 CDS PST_2812 NC_009434.1 3035137 3037050 D hypothetical protein 3035137..3037050 Pseudomonas stutzeri A1501 5095775 YP_001173302.1 CDS PST_2814 NC_009434.1 3037226 3037696 D Code: P; COG: COG0783; DNA-binding stress protein 3037226..3037696 Pseudomonas stutzeri A1501 5095776 YP_001173303.1 CDS PST_2815 NC_009434.1 3037821 3038552 D cold-shock DNA-binding protein 3037821..3038552 Pseudomonas stutzeri A1501 5095777 YP_001173304.1 CDS PST_2816 NC_009434.1 3038592 3038807 R Code: S; COG: COG2900; hypothetical protein complement(3038592..3038807) Pseudomonas stutzeri A1501 5095778 YP_001173305.1 CDS PST_2817 NC_009434.1 3038804 3039373 R Code: FGR; COG: COG0537; histidine triad family protein complement(3038804..3039373) Pseudomonas stutzeri A1501 5095779 YP_001173306.1 CDS oprQ NC_009434.1 3039662 3040957 D outer membrane protein OprE3 3039662..3040957 Pseudomonas stutzeri A1501 5095780 YP_001173307.1 CDS proS NC_009434.1 3041113 3042828 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3041113..3042828 Pseudomonas stutzeri A1501 5095781 YP_001173308.1 CDS PST_2820 NC_009434.1 3042838 3043770 D putative lipoprotein 3042838..3043770 Pseudomonas stutzeri A1501 5095782 YP_001173309.1 CDS PST_2821 NC_009434.1 3043776 3044348 D Code: M; COG: COG0741; transglycosylase 3043776..3044348 Pseudomonas stutzeri A1501 5095783 YP_001173310.1 CDS PST_2823 NC_009434.1 3044356 3044811 R Code: OC; COG: COG0526; thioredoxin complement(3044356..3044811) Pseudomonas stutzeri A1501 5095784 YP_001173311.1 CDS PST_2822 NC_009434.1 3044810 3045424 D hypothetical protein 3044810..3045424 Pseudomonas stutzeri A1501 5095785 YP_001173312.1 CDS PST_2825 NC_009434.1 3045772 3046947 R Code: S; COG: COG1295; ribonuclease complement(3045772..3046947) Pseudomonas stutzeri A1501 5095786 YP_001173313.1 CDS arsC-1 NC_009434.1 3046927 3047514 D arsenate reductase 3046927..3047514 Pseudomonas stutzeri A1501 5095787 YP_001173314.1 CDS PST_2826 NC_009434.1 3047511 3048116 D Code: R; COG: COG0655; trp repressor binding protein 3047511..3048116 Pseudomonas stutzeri A1501 5095788 YP_001173315.1 CDS PST_2827 NC_009434.1 3048109 3048519 D Code: S; COG: COG3308; hypothetical protein 3048109..3048519 Pseudomonas stutzeri A1501 5095789 YP_001173316.1 CDS PST_2828 NC_009434.1 3048560 3049231 R controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor complement(3048560..3049231) Pseudomonas stutzeri A1501 5095790 YP_001173317.1 CDS PST_2829 NC_009434.1 3049261 3050358 R Code: R; COG: COG0628; transporter complement(3049261..3050358) Pseudomonas stutzeri A1501 5095791 YP_001173318.1 CDS purM NC_009434.1 3051904 3052878 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3051904..3052878 Pseudomonas stutzeri A1501 5095792 YP_001173319.1 CDS purN NC_009434.1 3052878 3053525 D glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 3052878..3053525 Pseudomonas stutzeri A1501 5095793 YP_001173320.1 CDS PST_2832 NC_009434.1 3053534 3054244 D dehydrogenase 3053534..3054244 Pseudomonas stutzeri A1501 5095794 YP_001173321.1 CDS PST_2833 NC_009434.1 3054298 3054963 D Code: S; COG: COG3650; putative lipoprotein 3054298..3054963 Pseudomonas stutzeri A1501 5095795 YP_001173322.1 CDS PST_2834 NC_009434.1 3055014 3056210 D catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 3055014..3056210 Pseudomonas stutzeri A1501 5095796 YP_001173323.1 CDS PST_2835 NC_009434.1 3056251 3056412 R hypothetical protein complement(3056251..3056412) Pseudomonas stutzeri A1501 5095797 YP_001173324.1 CDS PST_2837 NC_009434.1 3056427 3056672 R hypothetical protein complement(3056427..3056672) Pseudomonas stutzeri A1501 5095798 YP_001173325.1 CDS PST_2836 NC_009434.1 3056662 3057132 D Code: OC; COG: COG0526; thioredoxin 3056662..3057132 Pseudomonas stutzeri A1501 5095799 YP_001173326.1 CDS PST_2838 NC_009434.1 3057259 3057630 D Code: P; COG: COG1393; ArsC family protein 3057259..3057630 Pseudomonas stutzeri A1501 5095800 YP_001173327.1 CDS dapD NC_009434.1 3057675 3058709 D Code: E; COG: COG2171; tetrahydrodipicolinate succinylase 3057675..3058709 Pseudomonas stutzeri A1501 5095801 YP_001173328.1 CDS csdA NC_009434.1 3058781 3059986 D Code: E; COG: COG0520; cysteine sulfinate desulfinase 3058781..3059986 Pseudomonas stutzeri A1501 5095802 YP_001173329.1 CDS sufE NC_009434.1 3059983 3060390 D Code: R; COG: COG2166; Fe-S metabolism associated protein SufE 3059983..3060390 Pseudomonas stutzeri A1501 5095803 YP_001173330.1 CDS PST_2842 NC_009434.1 3060440 3061561 R catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(3060440..3061561) Pseudomonas stutzeri A1501 5095804 YP_001173331.1 CDS PST_2843 NC_009434.1 3061817 3062740 R Code: C; COG: COG3258; cytochrome c family protein complement(3061817..3062740) Pseudomonas stutzeri A1501 5095805 YP_001173332.1 CDS PST_2844 NC_009434.1 3062737 3063387 R Code: C; COG: COG2863; cytochrome c type protein complement(3062737..3063387) Pseudomonas stutzeri A1501 5095806 YP_001173333.1 CDS PST_2845 NC_009434.1 3063644 3064174 D hypothetical protein 3063644..3064174 Pseudomonas stutzeri A1501 5095807 YP_001173334.1 CDS PST_2846 NC_009434.1 3064193 3064459 R Code: S; COG: COG3530; hypothetical protein complement(3064193..3064459) Pseudomonas stutzeri A1501 5095808 YP_001173335.1 CDS PST_2847 NC_009434.1 3064626 3065156 D Code: R; COG: COG0666; ankyrin domain-containing protein 3064626..3065156 Pseudomonas stutzeri A1501 5095809 YP_001173336.1 CDS PST_2848 NC_009434.1 3065164 3065634 R Code: S; COG: COG2606; YbaK/EbsC protein complement(3065164..3065634) Pseudomonas stutzeri A1501 5095810 YP_001173337.1 CDS glpD-1 NC_009434.1 3065706 3067250 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 3065706..3067250 Pseudomonas stutzeri A1501 5095811 YP_001173338.1 CDS metE NC_009434.1 3067276 3069591 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(3067276..3069591) Pseudomonas stutzeri A1501 5095812 YP_001173339.1 CDS PST_2851 NC_009434.1 3069753 3070343 D ABC transporter permease 3069753..3070343 Pseudomonas stutzeri A1501 5095813 YP_001173340.1 CDS metR NC_009434.1 3070497 3071423 D Code: K; COG: COG0583; transcriptional regulator MetR 3070497..3071423 Pseudomonas stutzeri A1501 5095814 YP_001173341.1 CDS PST_2853 NC_009434.1 3071433 3072407 R Code: IQR; COG: COG1028; short chain dehydrogenase complement(3071433..3072407) Pseudomonas stutzeri A1501 5095815 YP_001173342.1 CDS PST_2854 NC_009434.1 3072502 3072957 R Code: S; COG: COG2764; glyoxalase family protein complement(3072502..3072957) Pseudomonas stutzeri A1501 5095816 YP_001173343.1 CDS PST_2855 NC_009434.1 3073031 3073666 R Code: E; COG: COG1280; amino acid transporter LysE complement(3073031..3073666) Pseudomonas stutzeri A1501 5095817 YP_001173344.1 CDS PST_2856 NC_009434.1 3073878 3074525 D LuxR family DNA-binding response regulator 3073878..3074525 Pseudomonas stutzeri A1501 5095818 YP_001173345.1 CDS PST_2857 NC_009434.1 3074522 3074905 D chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; curli assembly protein CsgE 3074522..3074905 Pseudomonas stutzeri A1501 5095819 YP_001173346.1 CDS PST_2858 NC_009434.1 3074902 3075318 D curli fiber protein CsgF 3074902..3075318 Pseudomonas stutzeri A1501 5095820 YP_001173347.1 CDS csgG NC_009434.1 3075367 3076170 D Code: M; COG: COG1462; curli fiber membrane-associated lipoprotein CsgG 3075367..3076170 Pseudomonas stutzeri A1501 5095821 YP_001173348.1 CDS PST_2860 NC_009434.1 3076360 3076893 D curli fiber surface-exposed nucleator CsgB 3076360..3076893 Pseudomonas stutzeri A1501 5095822 YP_001173349.1 CDS PST_2861 NC_009434.1 3076941 3078227 D PPE repeat-containing protein 3076941..3078227 Pseudomonas stutzeri A1501 5095823 YP_001173350.1 CDS PST_2862 NC_009434.1 3078594 3079391 D Code: M; COG: COG3248; nucleoside-binding outer membrane protein 3078594..3079391 Pseudomonas stutzeri A1501 5095824 YP_001173351.1 CDS PST_2863 NC_009434.1 3079771 3080304 D Code: K; COG: COG1309; transcriptional regulator 3079771..3080304 Pseudomonas stutzeri A1501 5095825 YP_001173352.1 CDS PST_2864 NC_009434.1 3080309 3081268 D Code: K; COG: COG0583; transcriptional regulator 3080309..3081268 Pseudomonas stutzeri A1501 5095826 YP_001173353.1 CDS PST_2865 NC_009434.1 3081326 3081844 D Code: O; COG: COG4067; hypothetical protein 3081326..3081844 Pseudomonas stutzeri A1501 5095827 YP_001173354.1 CDS PST_2866 NC_009434.1 3081858 3082886 R Code: R; COG: COG1092; SAM-dependent methyltransferase complement(3081858..3082886) Pseudomonas stutzeri A1501 5095828 YP_001173355.1 CDS PST_2867 NC_009434.1 3083075 3084457 D Code: J; COG: COG1236; metallo-beta-lactamase family protein 3083075..3084457 Pseudomonas stutzeri A1501 5095829 YP_001173356.1 CDS PST_2868 NC_009434.1 3084491 3084967 D Code: E; COG: COG0346; glyoxalase/bleomycin resistance protein/dioxygenase 3084491..3084967 Pseudomonas stutzeri A1501 5095830 YP_001173357.1 CDS PST_2869 NC_009434.1 3085059 3086729 R Code: E; COG: COG0405; gamma-glutamyltranspeptidase complement(3085059..3086729) Pseudomonas stutzeri A1501 5095831 YP_001173358.1 CDS PST_2871 NC_009434.1 3086846 3088081 R zinc-containing alcohol dehydrogenase complement(3086846..3088081) Pseudomonas stutzeri A1501 5095832 YP_001173359.1 CDS PST_2870 NC_009434.1 3088080 3089600 D phosphate ABC transporter periplasmic protein 3088080..3089600 Pseudomonas stutzeri A1501 5095833 YP_001173360.1 CDS PST_2872 NC_009434.1 3089607 3090083 R hypothetical protein complement(3089607..3090083) Pseudomonas stutzeri A1501 5095834 YP_001173361.1 CDS PST_2873 NC_009434.1 3090150 3091715 R Code: P; COG: COG0659; sulfate transporter complement(3090150..3091715) Pseudomonas stutzeri A1501 5095835 YP_001173362.1 CDS PST_2874 NC_009434.1 3092017 3093078 R hypothetical protein complement(3092017..3093078) Pseudomonas stutzeri A1501 5095836 YP_001173363.1 CDS PST_2875 NC_009434.1 3093082 3093330 R Code: IQ; COG: COG0236; acyl carrier protein complement(3093082..3093330) Pseudomonas stutzeri A1501 5095837 YP_001173364.1 CDS PST_2876 NC_009434.1 3093327 3095228 R Code: Q; COG: COG3882; methoxymalonyl-ACP biosynthesis protein complement(3093327..3095228) Pseudomonas stutzeri A1501 5095838 YP_001173365.1 CDS algI NC_009434.1 3095249 3096544 R Code: M; COG: COG1696; alginate O-acetylation protein AlgI complement(3095249..3096544) Pseudomonas stutzeri A1501 5095839 YP_001173366.1 CDS PST_2878 NC_009434.1 3096628 3097665 R putative transposase TnpA complement(3096628..3097665) Pseudomonas stutzeri A1501 5095840 YP_001173367.1 CDS PST_2879 NC_009434.1 3097705 3097896 R hypothetical protein complement(3097705..3097896) Pseudomonas stutzeri A1501 5095841 YP_001173368.1 CDS PST_2880 NC_009434.1 3098160 3098996 R Code: M; COG: COG1091; dTDP-4-dehydrorhamnose reductase complement(3098160..3098996) Pseudomonas stutzeri A1501 5095842 YP_001173369.1 CDS PST_2881 NC_009434.1 3099554 3100183 R Code: E; COG: COG1280; LysE family efflux protein complement(3099554..3100183) Pseudomonas stutzeri A1501 5095843 YP_001173370.1 CDS PST_2882 NC_009434.1 3100582 3102669 D sensory box histidine kinase/response regulator 3100582..3102669 Pseudomonas stutzeri A1501 5095844 YP_001173371.1 CDS PST_2883 NC_009434.1 3102676 3103377 R Code: IQR; COG: COG1028; short chain dehydrogenase/reductase family oxidoreductase complement(3102676..3103377) Pseudomonas stutzeri A1501 5095845 YP_001173372.1 CDS PST_2884 NC_009434.1 3103394 3105067 R putative ABC1 protein complement(3103394..3105067) Pseudomonas stutzeri A1501 5095846 YP_001173373.1 CDS PST_2885 NC_009434.1 3105106 3106632 D Code: T; COG: COG0467; circadian oscillation regulator 3105106..3106632 Pseudomonas stutzeri A1501 5095847 YP_001173374.1 CDS PST_2886 NC_009434.1 3106616 3108301 D sensory box histidine kinase/response regulator 3106616..3108301 Pseudomonas stutzeri A1501 5095848 YP_001173375.1 CDS PST_2887 NC_009434.1 3108338 3108553 R imidazoleglycerol-phosphate synthase complement(3108338..3108553) Pseudomonas stutzeri A1501 5095849 YP_001173376.1 CDS PST_2888 NC_009434.1 3108550 3110355 R Code: V; COG: COG1132; ABC transporter ATP-binding protein/permease complement(3108550..3110355) Pseudomonas stutzeri A1501 5095850 YP_001173377.1 CDS PST_2889 NC_009434.1 3110352 3111506 R beta-glucosidase/6-phospho-beta- glucosidase/beta- galactosidase complement(3110352..3111506) Pseudomonas stutzeri A1501 5095851 YP_001173378.1 CDS glf NC_009434.1 3111605 3112825 R Code: M; COG: COG0562; UDP-galactopyranose mutase complement(3111605..3112825) Pseudomonas stutzeri A1501 5095852 YP_001173379.1 CDS PST_2891 NC_009434.1 3112813 3113997 R Code: M; COG: COG0438; glycosyltransferase complement(3112813..3113997) Pseudomonas stutzeri A1501 5095853 YP_001173380.1 CDS galE NC_009434.1 3114423 3115487 D Code: M; COG: COG1087; UDP-glucose 4-epimerase 3114423..3115487 Pseudomonas stutzeri A1501 5095854 YP_001173381.1 CDS PST_2893 NC_009434.1 3115564 3116061 R hypothetical protein complement(3115564..3116061) Pseudomonas stutzeri A1501 5095855 YP_001173382.1 CDS trpI NC_009434.1 3116240 3117130 R Code: K; COG: COG0583; transcriptional regulator TrpI complement(3116240..3117130) Pseudomonas stutzeri A1501 5095856 YP_001173383.1 CDS PST_2895 NC_009434.1 3117256 3118467 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3117256..3118467 Pseudomonas stutzeri A1501 5095857 YP_001173384.1 CDS trpA NC_009434.1 3118464 3119273 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 3118464..3119273 Pseudomonas stutzeri A1501 5095858 YP_001173385.1 CDS PST_2897 NC_009434.1 3119660 3120640 D Code: R; COG: COG3491; oxidoreductase 3119660..3120640 Pseudomonas stutzeri A1501 5095859 YP_001173386.1 CDS PST_2898 NC_009434.1 3120633 3121382 D putative alkyl salicylate esterase 3120633..3121382 Pseudomonas stutzeri A1501 5095860 YP_001173387.1 CDS PST_2899 NC_009434.1 3121433 3122410 D Code: P; COG: COG0715; hypothetical protein 3121433..3122410 Pseudomonas stutzeri A1501 5095861 YP_001173388.1 CDS PST_2900 NC_009434.1 3122415 3123218 D Code: P; COG: COG1116; ABC transporter ATP-binding protein 3122415..3123218 Pseudomonas stutzeri A1501 5095862 YP_001173389.1 CDS PST_2901 NC_009434.1 3123163 3123999 D Code: P; COG: COG0600; ABC transporter permease 3123163..3123999 Pseudomonas stutzeri A1501 5095863 YP_001173390.1 CDS PST_2902 NC_009434.1 3124036 3124506 D Code: FJ; COG: COG0590; cytidine/deoxycytidylate deaminase family protein 3124036..3124506 Pseudomonas stutzeri A1501 5095864 YP_001173391.1 CDS PST_2903 NC_009434.1 3124630 3125367 D Code: R; COG: COG4221; short-chain dehydrogenase 3124630..3125367 Pseudomonas stutzeri A1501 5095865 YP_001173392.1 CDS PST_2904 NC_009434.1 3125378 3125833 D Code: S; COG: COG0599; gamma-carboxymuconolactone decarboxylase 3125378..3125833 Pseudomonas stutzeri A1501 5095866 YP_001173393.1 CDS PST_2905 NC_009434.1 3125978 3126898 R Code: K; COG: COG2207; transcriptional regulator complement(3125978..3126898) Pseudomonas stutzeri A1501 5095867 YP_001173394.1 CDS PST_2906 NC_009434.1 3126931 3127260 R hypothetical protein complement(3126931..3127260) Pseudomonas stutzeri A1501 5095868 YP_001173395.1 CDS PST_2907 NC_009434.1 3127369 3128706 D ABC transporter ATP-binding protein 3127369..3128706 Pseudomonas stutzeri A1501 5095869 YP_001173396.1 CDS PST_2908 NC_009434.1 3128719 3129825 D Code: R; COG: COG4603; ABC transporter permease 3128719..3129825 Pseudomonas stutzeri A1501 5095870 YP_001173397.1 CDS PST_2909 NC_009434.1 3129891 3130817 D Code: R; COG: COG1079; ABC transporter permease 3129891..3130817 Pseudomonas stutzeri A1501 5095871 YP_001173398.1 CDS PST_2910 NC_009434.1 3131520 3132245 R hypothetical protein complement(3131520..3132245) Pseudomonas stutzeri A1501 5095872 YP_001173399.1 CDS PST_2911 NC_009434.1 3132318 3132818 R hypothetical protein complement(3132318..3132818) Pseudomonas stutzeri A1501 5095873 YP_001173400.1 CDS PST_2912 NC_009434.1 3132840 3134069 D Code: C; COG: COG1301; proton-glutamate symporter 3132840..3134069 Pseudomonas stutzeri A1501 5095874 YP_001173401.1 CDS topB NC_009434.1 3134600 3136447 D decatenates replicating daughter chromosomes; DNA topoisomerase III 3134600..3136447 Pseudomonas stutzeri A1501 5095875 YP_001173402.1 CDS PST_2914 NC_009434.1 3136530 3137006 R transcription elongation factor complement(3136530..3137006) Pseudomonas stutzeri A1501 5095876 YP_001173403.1 CDS PST_2916 NC_009434.1 3137003 3138196 R Code: R; COG: COG4757; alpha/beta hydrolase complement(3137003..3138196) Pseudomonas stutzeri A1501 5095877 YP_001173404.1 CDS PST_2915 NC_009434.1 3138195 3140042 D Code: P; COG: COG0471; sodium/sulfate symporter family protein 3138195..3140042 Pseudomonas stutzeri A1501 5095878 YP_001173405.1 CDS PST_2917 NC_009434.1 3140085 3142250 R methyl-accepting chemotaxis protein complement(3140085..3142250) Pseudomonas stutzeri A1501 5095879 YP_001173406.1 CDS PST_2918 NC_009434.1 3142458 3143684 D Code: G; COG: COG2814; major facilitator family transporter 3142458..3143684 Pseudomonas stutzeri A1501 5095880 YP_001173407.1 CDS PST_2919 NC_009434.1 3143820 3144746 D Code: R; COG: COG1073; alpha/beta fold family hydrolase 3143820..3144746 Pseudomonas stutzeri A1501 5095881 YP_001173408.1 CDS PST_2920 NC_009434.1 3144820 3145764 D Code: S; COG: COG4275; chromate resistance protein 3144820..3145764 Pseudomonas stutzeri A1501 5095882 YP_001173409.1 CDS PST_2921 NC_009434.1 3145718 3147115 D Code: P; COG: COG2059; chromate transporter 3145718..3147115 Pseudomonas stutzeri A1501 5095883 YP_001173410.1 CDS PST_2922 NC_009434.1 3147142 3148197 R Code: R; COG: COG0596; alpha/beta fold family hydrolase complement(3147142..3148197) Pseudomonas stutzeri A1501 5095884 YP_001173411.1 CDS PST_2923 NC_009434.1 3148265 3150007 R methyl-accepting chemotaxis transducer complement(3148265..3150007) Pseudomonas stutzeri A1501 5095885 YP_001173412.1 CDS PST_2924 NC_009434.1 3150695 3151120 R 3-isopropylmalate dehydratase large subunit complement(3150695..3151120) Pseudomonas stutzeri A1501 5095886 YP_001173413.1 CDS PST_2925 NC_009434.1 3151234 3152082 D Code: K; COG: COG2207; AraC family transcriptional regulator 3151234..3152082 Pseudomonas stutzeri A1501 5095887 YP_001173414.1 CDS PST_2926 NC_009434.1 3152079 3152648 R Code: E; COG: COG1280; amino acid transporter LysE complement(3152079..3152648) Pseudomonas stutzeri A1501 5095888 YP_001173415.1 CDS PST_2927 NC_009434.1 3153012 3153269 R hypothetical protein complement(3153012..3153269) Pseudomonas stutzeri A1501 5095889 YP_001173416.1 CDS PST_2928 NC_009434.1 3153279 3155387 D Code: NT; COG: COG0840; methyl-accepting chemotaxis protein 3153279..3155387 Pseudomonas stutzeri A1501 5095890 YP_001173417.1 CDS PST_2929 NC_009434.1 3155515 3155913 D hypothetical protein 3155515..3155913 Pseudomonas stutzeri A1501 5095891 YP_001173418.1 CDS PST_2930 NC_009434.1 3156084 3157349 D Code: S; COG: COG2733; hypothetical protein 3156084..3157349 Pseudomonas stutzeri A1501 5095892 YP_001173419.1 CDS PST_2931 NC_009434.1 3157355 3157999 R Code: P; COG: COG1116; ABC transporter ATP-binding protein complement(3157355..3157999) Pseudomonas stutzeri A1501 5095893 YP_001173420.1 CDS PST_2932 NC_009434.1 3157992 3158753 R Code: P; COG: COG0600; sulfonate ABC transporter permease complement(3157992..3158753) Pseudomonas stutzeri A1501 5095894 YP_001173421.1 CDS PST_2933 NC_009434.1 3158750 3159754 R ABC transporter substrate-binding protein complement(3158750..3159754) Pseudomonas stutzeri A1501 5095895 YP_001173422.1 CDS PST_2934 NC_009434.1 3159866 3160309 R Code: FGR; COG: COG0537; HIT family protein complement(3159866..3160309) Pseudomonas stutzeri A1501 5095896 YP_001173423.1 CDS cpg2 NC_009434.1 3160377 3161678 D catalyzes the release of C-terminal glutamate residues from N-acylating moieties; glutamate carboxypeptidase 3160377..3161678 Pseudomonas stutzeri A1501 5095897 YP_001173424.1 CDS PST_2936 NC_009434.1 3161797 3162504 D Code: S; COG: COG2258; hypothetical protein 3161797..3162504 Pseudomonas stutzeri A1501 5095898 YP_001173425.1 CDS PST_2937 NC_009434.1 3162582 3163136 D Code: S; COG: COG3904; hypothetical protein 3162582..3163136 Pseudomonas stutzeri A1501 5095899 YP_001173426.1 CDS PST_2938 NC_009434.1 3163228 3163887 D Code: R; COG: COG1266; CAAX amino terminal protease family protein 3163228..3163887 Pseudomonas stutzeri A1501 5095900 YP_001173427.1 CDS PST_2939 NC_009434.1 3164008 3164427 D Code: S; COG: COG3795; hypothetical protein 3164008..3164427 Pseudomonas stutzeri A1501 5095901 YP_001173428.1 CDS PST_2940 NC_009434.1 3164445 3164861 D Code: S; COG: COG2764; glyoxalase family protein 3164445..3164861 Pseudomonas stutzeri A1501 5095902 YP_001173429.1 CDS PST_2941 NC_009434.1 3165056 3166219 D Code: S; COG: COG3503; hypothetical protein 3165056..3166219 Pseudomonas stutzeri A1501 5095903 YP_001173430.1 CDS PST_2942 NC_009434.1 3166298 3167611 R Code: C; COG: COG2851; citrate transporter complement(3166298..3167611) Pseudomonas stutzeri A1501 5095904 YP_001173431.1 CDS PST_2943 NC_009434.1 3167812 3169467 D Code: NU; COG: COG3170; hypothetical protein 3167812..3169467 Pseudomonas stutzeri A1501 5095905 YP_001173432.1 CDS PST_2944 NC_009434.1 3169531 3170544 D Code: R; COG: COG1234; metallo-beta-lactamase family protein 3169531..3170544 Pseudomonas stutzeri A1501 5095906 YP_001173433.1 CDS PST_2945 NC_009434.1 3170628 3171515 D Code: Q; COG: COG0412; dienelactone hydrolase family protein 3170628..3171515 Pseudomonas stutzeri A1501 5095907 YP_001173434.1 CDS PST_2946 NC_009434.1 3171669 3172484 D Code: R; COG: COG0596; hydrolase-related protein 3171669..3172484 Pseudomonas stutzeri A1501 5095908 YP_001173435.1 CDS PST_2947 NC_009434.1 3172566 3173333 R Code: R; COG: COG3257; hypothetical protein complement(3172566..3173333) Pseudomonas stutzeri A1501 5095909 YP_001173436.1 CDS ftsJ NC_009434.1 3173837 3174472 R Code: J; COG: COG0293; cell division protein FtsJ complement(3173837..3174472) Pseudomonas stutzeri A1501 5095910 YP_001173437.1 CDS PST_2949 NC_009434.1 3174665 3176341 D Code: R; COG: COG2509; FAD-dependent dehydrogenase 3174665..3176341 Pseudomonas stutzeri A1501 5095911 YP_001173438.1 CDS PST_2950 NC_009434.1 3176353 3177078 D Code: J; COG: COG0566; rRNA methylase 3176353..3177078 Pseudomonas stutzeri A1501 5095912 YP_001173439.1 CDS PST_2951 NC_009434.1 3177009 3178058 D Code: T; COG: COG0631; phosphoprotein phosphatase 3177009..3178058 Pseudomonas stutzeri A1501 5095913 YP_001173440.1 CDS PST_2952 NC_009434.1 3178077 3179633 D hypothetical protein 3178077..3179633 Pseudomonas stutzeri A1501 5095914 YP_001173441.1 CDS PST_2953 NC_009434.1 3179691 3180530 D FHA domain-containing protein 3179691..3180530 Pseudomonas stutzeri A1501 5095915 YP_001173442.1 CDS rarD-2 NC_009434.1 3180636 3181553 R Code: R; COG: COG2962; RarD protein complement(3180636..3181553) Pseudomonas stutzeri A1501 5095916 YP_001173443.1 CDS hrpA NC_009434.1 3181561 3185838 R Code: L; COG: COG1643; ATP-dependent helicase HrpA complement(3181561..3185838) Pseudomonas stutzeri A1501 5095917 YP_001173444.1 CDS PST_2956 NC_009434.1 3185744 3187348 R Code: R; COG: COG2234; aminopeptidase complement(3185744..3187348) Pseudomonas stutzeri A1501 5095918 YP_001173445.1 CDS PST_2957 NC_009434.1 3187356 3187568 R hypothetical protein complement(3187356..3187568) Pseudomonas stutzeri A1501 5095919 YP_001173446.1 CDS PST_2958 NC_009434.1 3187593 3189359 R Code: NT; COG: COG0840; chemotaxis transducer complement(3187593..3189359) Pseudomonas stutzeri A1501 5095920 YP_001173447.1 CDS PST_2959 NC_009434.1 3189467 3191152 R Code: NT; COG: COG0840; chemotaxis transducer complement(3189467..3191152) Pseudomonas stutzeri A1501 5095921 YP_001173448.1 CDS fadD1 NC_009434.1 3191329 3193020 R activates fatty acids by binding to coenzyme A; involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids; long-chain-fatty-acid--CoA ligase complement(3191329..3193020) Pseudomonas stutzeri A1501 5095922 YP_001173449.2 CDS PST_2961 NC_009434.1 3193244 3194932 R Disruption of the fadD2 gene did not have any effect on the catabolism of acetic, butyric and longer fatty acids (aliphatic or aromatic); however, might be involved in the specific activation of other fatty acids and may be functional when FadD1 is inactivated.; long-chain-fatty-acid--CoA ligase complement(3193244..3194932) Pseudomonas stutzeri A1501 5095923 YP_001173450.1 CDS phaJ1 NC_009434.1 3195206 3195676 D Code: I; COG: COG2030; enoyl-CoA hydratase, R-specific 3195206..3195676 Pseudomonas stutzeri A1501 5095924 YP_001173451.1 CDS PST_2963 NC_009434.1 3195712 3199032 D Code: G; COG: COG1523; type II secretory pathway protein 3195712..3199032 Pseudomonas stutzeri A1501 5095925 YP_001173452.1 CDS PST_2964 NC_009434.1 3199102 3199212 R hypothetical protein complement(3199102..3199212) Pseudomonas stutzeri A1501 5095926 YP_001173453.1 CDS PST_2965 NC_009434.1 3199218 3199415 R hypothetical protein complement(3199218..3199415) Pseudomonas stutzeri A1501 5095927 YP_001173454.1 CDS PST_2966 NC_009434.1 3199470 3199631 R hypothetical protein complement(3199470..3199631) Pseudomonas stutzeri A1501 5095928 YP_001173455.1 CDS PST_2967 NC_009434.1 3199621 3200259 R Code: L; COG: COG3145; DNA repair system protein complement(3199621..3200259) Pseudomonas stutzeri A1501 5095929 YP_001173456.1 CDS PST_2968 NC_009434.1 3200246 3200542 R aspartate-semialdehyde dehydrogenase complement(3200246..3200542) Pseudomonas stutzeri A1501 5095930 YP_001173457.1 CDS hepA NC_009434.1 3200692 3203541 D transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 3200692..3203541 Pseudomonas stutzeri A1501 5095931 YP_001173458.1 CDS PST_2970 NC_009434.1 3203601 3204524 R hypothetical protein complement(3203601..3204524) Pseudomonas stutzeri A1501 5095932 YP_001173459.1 CDS yegD NC_009434.1 3204629 3205948 R Code: O; COG: COG0443; heat shock protein YegD complement(3204629..3205948) Pseudomonas stutzeri A1501 5095933 YP_001173460.1 CDS PST_2972 NC_009434.1 3206057 3207460 R Code: GEPR; COG: COG0477; major facilitator family transporter complement(3206057..3207460) Pseudomonas stutzeri A1501 5095934 YP_001173461.1 CDS PST_2973 NC_009434.1 3207524 3208306 R Code: G; COG: COG3622; hydroxypyruvate isomerase complement(3207524..3208306) Pseudomonas stutzeri A1501 5095935 YP_001173462.1 CDS PST_2974 NC_009434.1 3208303 3209190 R Code: I; COG: COG2084; 3-hydroxyisobutyrate dehydrogenase complement(3208303..3209190) Pseudomonas stutzeri A1501 5095936 YP_001173463.1 CDS PST_2975 NC_009434.1 3209451 3210263 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 3209451..3210263 Pseudomonas stutzeri A1501 5095937 YP_001173464.1 CDS PST_2976 NC_009434.1 3210293 3210571 D hypothetical protein 3210293..3210571 Pseudomonas stutzeri A1501 5095938 YP_001173465.1 CDS PST_2977 NC_009434.1 3210761 3211612 D Code: P; COG: COG3221; phosphonate ABC transporter periplasmic phosphonate-binding protein 3210761..3211612 Pseudomonas stutzeri A1501 5095939 YP_001173466.1 CDS PST_2978 NC_009434.1 3211731 3212486 D Code: P; COG: COG3638; ABC transporter ATP-binding protein 3211731..3212486 Pseudomonas stutzeri A1501 5095940 YP_001173467.1 CDS PST_2979 NC_009434.1 3212480 3213313 D Code: P; COG: COG3639; ABC transporter permease 3212480..3213313 Pseudomonas stutzeri A1501 5095941 YP_001173468.1 CDS PST_2980 NC_009434.1 3213310 3214077 D Code: P; COG: COG3639; ABC transporter permease 3213310..3214077 Pseudomonas stutzeri A1501 5095942 YP_001173469.1 CDS PST_2981 NC_009434.1 3214108 3214455 R Code: S; COG: COG5626; hypothetical protein complement(3214108..3214455) Pseudomonas stutzeri A1501 5095943 YP_001173470.1 CDS braC NC_009434.1 3214625 3215743 D Code: E; COG: COG0683; branched-chain amino acid transport protein BraC 3214625..3215743 Pseudomonas stutzeri A1501 5095944 YP_001173471.1 CDS braD NC_009434.1 3215999 3216922 D Code: E; COG: COG0559; branched-chain amino acid transport protein BraD 3215999..3216922 Pseudomonas stutzeri A1501 5095945 YP_001173472.1 CDS livM NC_009434.1 3216919 3218175 D Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 3216919..3218175 Pseudomonas stutzeri A1501 5095946 YP_001173473.1 CDS livG NC_009434.1 3218172 3218939 D Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 3218172..3218939 Pseudomonas stutzeri A1501 5095947 YP_001173474.1 CDS PST_2986 NC_009434.1 3218942 3219643 D Code: E; COG: COG0410; branched-chain amino acid ABC transporter ATP-binding protein 3218942..3219643 Pseudomonas stutzeri A1501 5095948 YP_001173475.1 CDS PST_2987 NC_009434.1 3219808 3220614 D Code: Q; COG: COG0412; dienelactone hydrolase family protein 3219808..3220614 Pseudomonas stutzeri A1501 5095949 YP_001173476.1 CDS PST_2988 NC_009434.1 3220894 3221151 D hypothetical protein 3220894..3221151 Pseudomonas stutzeri A1501 5095950 YP_001173477.1 CDS PST_2989 NC_009434.1 3221148 3221549 D Code: O; COG: COG3187; putative lipoprotein 3221148..3221549 Pseudomonas stutzeri A1501 5095951 YP_001173478.1 CDS dinP NC_009434.1 3221877 3222959 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(3221877..3222959) Pseudomonas stutzeri A1501 5095952 YP_001173479.1 CDS PST_2991 NC_009434.1 3223301 3223708 R Code: R; COG: COG0824; 4-hydroxybenzoyl-CoA thioesterase complement(3223301..3223708) Pseudomonas stutzeri A1501 5095953 YP_001173480.1 CDS gltX NC_009434.1 3224564 3226045 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(3224564..3226045) Pseudomonas stutzeri A1501 5095958 YP_001173481.1 CDS uvrB NC_009434.1 3226204 3228219 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(3226204..3228219) Pseudomonas stutzeri A1501 5095959 YP_001173482.2 CDS aspC NC_009434.1 3228517 3229713 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 3228517..3229713 Pseudomonas stutzeri A1501 5095960 YP_001173483.1 CDS PST_3000 NC_009434.1 3230298 3230741 R hypothetical protein complement(3230298..3230741) Pseudomonas stutzeri A1501 5095962 YP_001173484.1 CDS PST_3001 NC_009434.1 3230899 3232101 D Code: L; COG: COG3464; ISRSO15-transposase protein 3230899..3232101 Pseudomonas stutzeri A1501 5095963 YP_001173485.1 CDS PST_3002 NC_009434.1 3232167 3232493 R Code: O; COG: COG0278; glutaredoxin-like protein complement(3232167..3232493) Pseudomonas stutzeri A1501 5095964 YP_001173486.2 CDS argF NC_009434.1 3232768 3233688 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 3232768..3233688 Pseudomonas stutzeri A1501 5095965 YP_001173487.1 CDS PST_3004 NC_009434.1 3233607 3234782 D Code: E; COG: COG3842; ABC transporter ATP-binding protein 3233607..3234782 Pseudomonas stutzeri A1501 5095966 YP_001173488.1 CDS cumB NC_009434.1 3234779 3235216 R Code: FJ; COG: COG0590; cytidine/deoxycytidylate deaminase complement(3234779..3235216) Pseudomonas stutzeri A1501 5095967 YP_001173489.1 CDS cumA NC_009434.1 3235281 3236651 R Code: Q; COG: COG2132; multicopper oxidase complement(3235281..3236651) Pseudomonas stutzeri A1501 5095968 YP_001173490.1 CDS guaA NC_009434.1 3236762 3238342 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3236762..3238342) Pseudomonas stutzeri A1501 5095969 YP_001173491.1 CDS guaB NC_009434.1 3238459 3239928 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(3238459..3239928) Pseudomonas stutzeri A1501 5095970 YP_001173492.1 CDS PST_3009 NC_009434.1 3240055 3240729 R sugar ABC transporter ATPase complement(3240055..3240729) Pseudomonas stutzeri A1501 5095971 YP_001173493.1 CDS xseA NC_009434.1 3240737 3242113 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3240737..3242113 Pseudomonas stutzeri A1501 5095972 YP_001173494.1 CDS PST_3011 NC_009434.1 3242207 3243031 D Code: M; COG: COG0739; M24/M37 family peptidase 3242207..3243031 Pseudomonas stutzeri A1501 5095973 YP_001173495.1 CDS PST_3012 NC_009434.1 3243135 3243593 D Code: Q; COG: COG1335; isochorismatase superfamily hydrolase 3243135..3243593 Pseudomonas stutzeri A1501 5095974 YP_001173496.1 CDS PST_3013 NC_009434.1 3243673 3244974 D Code: M; COG: COG0668; mechanosensitive ion channel family protein 3243673..3244974 Pseudomonas stutzeri A1501 5095975 YP_001173497.1 CDS oprC NC_009434.1 3245142 3247391 R Code: P; COG: COG1629; outer membrane protein OprC complement(3245142..3247391) Pseudomonas stutzeri A1501 5095976 YP_001173498.1 CDS PST_3015 NC_009434.1 3247388 3247798 R hypothetical protein complement(3247388..3247798) Pseudomonas stutzeri A1501 5095977 YP_001173499.1 CDS leuA NC_009434.1 3248084 3249754 D Code: E; COG: COG0119; 2-isopropylmalate synthase 3248084..3249754 Pseudomonas stutzeri A1501 5095978 YP_001173500.1 CDS PST_3017 NC_009434.1 3250003 3251058 D Code: R; COG: COG1064; oxidoreductase, zinc-binding 3250003..3251058 Pseudomonas stutzeri A1501 5095979 YP_001173501.1 CDS PST_3018 NC_009434.1 3251148 3252002 D Code: GER; COG: COG0697; carboxylate/amino acid/amine transporter 3251148..3252002 Pseudomonas stutzeri A1501 5095980 YP_001173502.1 CDS endA NC_009434.1 3252105 3252836 D Code: L; COG: COG2356; DNA-specific endonuclease I 3252105..3252836 Pseudomonas stutzeri A1501 5095981 YP_001173503.1 CDS PST_3020 NC_009434.1 3252871 3253533 D Code: S; COG: COG3647; hypothetical protein 3252871..3253533 Pseudomonas stutzeri A1501 5095982 YP_001173504.1 CDS PST_3021 NC_009434.1 3253538 3253903 D hypothetical protein 3253538..3253903 Pseudomonas stutzeri A1501 5095983 YP_001173505.1 CDS PST_3022 NC_009434.1 3253869 3254915 D putative methyltransferase 3253869..3254915 Pseudomonas stutzeri A1501 5095984 YP_001173506.1 CDS PST_3023 NC_009434.1 3254918 3256267 D Code: E; COG: COG0531; amino acid transporter 3254918..3256267 Pseudomonas stutzeri A1501 5095985 YP_001173507.1 CDS PST_3024 NC_009434.1 3256264 3257058 R Code: R; COG: COG0388; carbon-nitrogen family hydrolase complement(3256264..3257058) Pseudomonas stutzeri A1501 5095986 YP_001173508.1 CDS PST_3025 NC_009434.1 3257046 3258194 R catalyzes the transfer of an amino moiety; putative aminotransferase complement(3257046..3258194) Pseudomonas stutzeri A1501 5095987 YP_001173509.1 CDS PST_3026 NC_009434.1 3258255 3259148 D Code: E; COG: COG1045; serine acetyltransferase 3258255..3259148 Pseudomonas stutzeri A1501 5095988 YP_001173510.1 CDS engA NC_009434.1 3259232 3260731 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(3259232..3260731) Pseudomonas stutzeri A1501 5095989 YP_001173511.1 CDS PST_3028 NC_009434.1 3260834 3261982 R Code: S; COG: COG1520; PQQ repeat-containing protein complement(3260834..3261982) Pseudomonas stutzeri A1501 5095990 YP_001173512.1 CDS PST_3029 NC_009434.1 3261986 3262627 R Code: S; COG: COG2976; hypothetical protein complement(3261986..3262627) Pseudomonas stutzeri A1501 5095991 YP_001173513.1 CDS hisS NC_009434.1 3262655 3263944 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(3262655..3263944) Pseudomonas stutzeri A1501 5095992 YP_001173514.1 CDS ispG NC_009434.1 3263961 3264977 R Code: I; COG: COG0821; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase complement(3263961..3264977) Pseudomonas stutzeri A1501 5095993 YP_001173515.1 CDS PST_3032 NC_009434.1 3265081 3266085 R Code: S; COG: COG1426; Cro/CI family transcriptional regulator complement(3265081..3266085) Pseudomonas stutzeri A1501 5095994 YP_001173516.1 CDS pilF NC_009434.1 3266082 3266840 R Code: NU; COG: COG3063; type IV pilus biogenesis protein PilF complement(3266082..3266840) Pseudomonas stutzeri A1501 5095995 YP_001173517.1 CDS PST_3034 NC_009434.1 3266852 3267895 R Code: R; COG: COG0820; radical SAM protein complement(3266852..3267895) Pseudomonas stutzeri A1501 5095996 YP_001173518.1 CDS ndk NC_009434.1 3268020 3268451 R Code: F; COG: COG0105; nucleoside diphosphate kinase complement(3268020..3268451) Pseudomonas stutzeri A1501 5095997 YP_001173519.1 CDS PST_3036 NC_009434.1 3268609 3268809 R Code: S; COG: COG2975; hypothetical protein complement(3268609..3268809) Pseudomonas stutzeri A1501 5095998 YP_001173520.1 CDS fdx2 NC_009434.1 3268820 3269158 R Code: C; COG: COG0633; ferredoxin complement(3268820..3269158) Pseudomonas stutzeri A1501 5095999 YP_001173521.1 CDS hscA NC_009434.1 3269164 3271026 R involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA complement(3269164..3271026) Pseudomonas stutzeri A1501 5096000 YP_001173522.1 CDS hscB NC_009434.1 3271066 3271587 R J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB complement(3271066..3271587) Pseudomonas stutzeri A1501 5096001 YP_001173523.1 CDS PST_3040 NC_009434.1 3271595 3271759 R hypothetical protein complement(3271595..3271759) Pseudomonas stutzeri A1501 5096002 YP_001173524.1 CDS iscU NC_009434.1 3271931 3272317 R Code: C; COG: COG0822; scaffold protein complement(3271931..3272317) Pseudomonas stutzeri A1501 5096003 YP_001173525.1 CDS iscS NC_009434.1 3272361 3273575 R catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase complement(3272361..3273575) Pseudomonas stutzeri A1501 5096004 YP_001173526.1 CDS PST_3043 NC_009434.1 3273607 3274158 R Code: K; COG: COG1959; iron-sulfur cluster assembly transcription factor IscR complement(3273607..3274158) Pseudomonas stutzeri A1501 5096005 YP_001173527.1 CDS cysE2 NC_009434.1 3274263 3275039 R Code: E; COG: COG1045; O-acetylserine synthase complement(3274263..3275039) Pseudomonas stutzeri A1501 5096006 YP_001173528.1 CDS PST_3045 NC_009434.1 3275039 3275875 R Code: J; COG: COG0565; methyltransferase complement(3275039..3275875) Pseudomonas stutzeri A1501 5096007 YP_001173529.1 CDS PST_3046 NC_009434.1 3275970 3276785 D Code: G; COG: COG0483; inositol-1-monophosphatase 3275970..3276785 Pseudomonas stutzeri A1501 5096008 YP_001173530.1 CDS PST_3047 NC_009434.1 3276845 3277432 R Code: S; COG: COG3134; hypothetical protein complement(3276845..3277432) Pseudomonas stutzeri A1501 5096009 YP_001173531.1 CDS secF NC_009434.1 3277456 3278367 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(3277456..3278367) Pseudomonas stutzeri A1501 5096010 YP_001173532.1 CDS secD NC_009434.1 3278380 3280107 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(3278380..3280107) Pseudomonas stutzeri A1501 5096011 YP_001173533.1 CDS yajC NC_009434.1 3280313 3280642 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(3280313..3280642) Pseudomonas stutzeri A1501 5096012 YP_001173534.1 CDS tgt NC_009434.1 3280685 3281818 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(3280685..3281818) Pseudomonas stutzeri A1501 5096013 YP_001173535.1 CDS queA NC_009434.1 3281815 3282780 R Code: J; COG: COG0809; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(3281815..3282780) Pseudomonas stutzeri A1501 5096014 YP_001173536.1 CDS PST_3054 NC_009434.1 3283461 3283673 D Code: K; COG: COG1278; cold acclimation protein B 3283461..3283673 Pseudomonas stutzeri A1501 5096016 YP_001173537.1 CDS PST_3055 NC_009434.1 3283771 3284268 D Code: S; COG: COG1714; hypothetical protein 3283771..3284268 Pseudomonas stutzeri A1501 5096017 YP_001173538.1 CDS PST_3056 NC_009434.1 3284347 3285408 R Code: R; COG: COG0795; permease complement(3284347..3285408) Pseudomonas stutzeri A1501 5096018 YP_001173539.1 CDS PST_3057 NC_009434.1 3285401 3286522 R Code: R; COG: COG0795; permease complement(3285401..3286522) Pseudomonas stutzeri A1501 5096019 YP_001173540.1 CDS pepA NC_009434.1 3286777 3288267 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 3286777..3288267 Pseudomonas stutzeri A1501 5096020 YP_001173541.1 CDS holC NC_009434.1 3288335 3288754 D Code: L; COG: COG2927; DNA polymerase III subunit chi 3288335..3288754 Pseudomonas stutzeri A1501 5096021 YP_001173542.1 CDS PST_3060 NC_009434.1 3288804 3289214 D hypothetical protein 3288804..3289214 Pseudomonas stutzeri A1501 5096022 YP_001173543.2 CDS valS NC_009434.1 3289316 3292150 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 3289316..3292150 Pseudomonas stutzeri A1501 5096023 YP_001173544.1 CDS PST_3062 NC_009434.1 3292505 3293887 D Code: P; COG: COG1055; Na+/H+ antiporter NhaD 3292505..3293887 Pseudomonas stutzeri A1501 5096024 YP_001173545.1 CDS PST_3063 NC_009434.1 3293945 3294241 D Code: S; COG: COG4519; hypothetical protein 3293945..3294241 Pseudomonas stutzeri A1501 5096025 YP_001173546.1 CDS PST_3064 NC_009434.1 3294418 3296073 D sodium:sulfate symporter 3294418..3296073 Pseudomonas stutzeri A1501 5096026 YP_001173547.1 CDS PST_3065 NC_009434.1 3296105 3297340 D Code: GEPR; COG: COG0477; hypothetical protein 3296105..3297340 Pseudomonas stutzeri A1501 5096027 YP_001173548.1 CDS PST_3066 NC_009434.1 3297398 3298381 D Code: R; COG: COG3129; putative SAM-dependent methyltransferase 3297398..3298381 Pseudomonas stutzeri A1501 5096028 YP_001173549.1 CDS PST_3067 NC_009434.1 3298411 3298602 R hypothetical protein complement(3298411..3298602) Pseudomonas stutzeri A1501 5096029 YP_001173550.1 CDS PST_3068 NC_009434.1 3299040 3300251 R Code: GEPR; COG: COG0477; MFS family transporter complement(3299040..3300251) Pseudomonas stutzeri A1501 5096030 YP_001173551.1 CDS PST_3069 NC_009434.1 3300353 3301108 R hypothetical protein complement(3300353..3301108) Pseudomonas stutzeri A1501 5096031 YP_001173552.1 CDS PST_3070 NC_009434.1 3301293 3302414 D Code: R; COG: COG3081; nucleoid-associated protein NdpA 3301293..3302414 Pseudomonas stutzeri A1501 5096032 YP_001173553.1 CDS PST_3071 NC_009434.1 3302572 3303240 D Code: S; COG: COG2326; hypothetical protein 3302572..3303240 Pseudomonas stutzeri A1501 5096033 YP_001173554.1 CDS PST_3072 NC_009434.1 3303237 3304031 D hypothetical protein 3303237..3304031 Pseudomonas stutzeri A1501 5096034 YP_001173555.1 CDS PST_3073 NC_009434.1 3304035 3304913 R Code: O; COG: COG0625; glutathione S-transferase complement(3304035..3304913) Pseudomonas stutzeri A1501 5096035 YP_001173556.1 CDS PST_3074 NC_009434.1 3305091 3305408 R Code: L; COG: COG2827; GIY-YIG nuclease superfamily protein complement(3305091..3305408) Pseudomonas stutzeri A1501 5096036 YP_001173557.1 CDS PST_3075 NC_009434.1 3305645 3306973 D YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase 3305645..3306973 Pseudomonas stutzeri A1501 5096037 YP_001173558.1 CDS PST_3076 NC_009434.1 3306995 3309712 R Code: P; COG: COG0474; cation-transporting P-type ATPase complement(3306995..3309712) Pseudomonas stutzeri A1501 5096038 YP_001173559.1 CDS PST_3077 NC_009434.1 3309826 3310593 D Code: IQR; COG: COG1028; short chain dehydrogenase 3309826..3310593 Pseudomonas stutzeri A1501 5096039 YP_001173560.1 CDS atzB NC_009434.1 3310803 3312158 D catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 3310803..3312158 Pseudomonas stutzeri A1501 5096040 YP_001173561.1 CDS PST_3079 NC_009434.1 3312065 3313453 D Code: R; COG: COG1744; Bmp family membrane protein 3312065..3313453 Pseudomonas stutzeri A1501 5096041 YP_001173562.1 CDS PST_3080 NC_009434.1 3313593 3314567 D Code: R; COG: COG3491; 2OG-Fe(II) oxygenase 3313593..3314567 Pseudomonas stutzeri A1501 5096042 YP_001173563.1 CDS xdhA NC_009434.1 3314876 3316177 D Code: F; COG: COG4630; xanthine dehydrogenase 3314876..3316177 Pseudomonas stutzeri A1501 5096043 YP_001173564.1 CDS xdhB NC_009434.1 3316170 3318566 D Code: F; COG: COG4631; xanthine dehydrogenase 3316170..3318566 Pseudomonas stutzeri A1501 5096044 YP_001173565.1 CDS PST_3083 NC_009434.1 3318785 3319528 D Code: O; COG: COG1975; xanthine dehydrogenase accessory factor XdhC 3318785..3319528 Pseudomonas stutzeri A1501 5096045 YP_001173566.1 CDS guaD NC_009434.1 3319618 3320925 D Catalyzes the deamination of guanine; guanine deaminase 3319618..3320925 Pseudomonas stutzeri A1501 5096046 YP_001173567.1 CDS PST_3085 NC_009434.1 3321806 3322624 R Code: P; COG: COG1108; zinc ABC transporter permease complement(3321806..3322624) Pseudomonas stutzeri A1501 5096047 YP_001173568.1 CDS PST_3088 NC_009434.1 3323584 3324339 R Code: K; COG: COG1802; GntR family transcriptional regulator complement(3323584..3324339) Pseudomonas stutzeri A1501 5096049 YP_001173569.1 CDS PST_3089 NC_009434.1 3324336 3324551 R hypothetical protein complement(3324336..3324551) Pseudomonas stutzeri A1501 5096050 YP_001173570.1 CDS PST_3090 NC_009434.1 3324649 3326037 D Code: R; COG: COG2252; transporter 3324649..3326037 Pseudomonas stutzeri A1501 5096051 YP_001173571.1 CDS PST_3091 NC_009434.1 3326102 3326728 D Code: E; COG: COG1280; amino acid transporter LysE 3326102..3326728 Pseudomonas stutzeri A1501 5096052 YP_001173572.1 CDS PST_3092 NC_009434.1 3326973 3327326 R Code: R; COG: COG2351; transthyretin family protein complement(3326973..3327326) Pseudomonas stutzeri A1501 5096053 YP_001173573.1 CDS PST_3093 NC_009434.1 3327546 3328535 D Code: G; COG: COG0726; polysaccharide deacetylase family protein 3327546..3328535 Pseudomonas stutzeri A1501 5096054 YP_001173574.1 CDS PST_3094 NC_009434.1 3328535 3329050 D Code: S; COG: COG3195; hypothetical protein 3328535..3329050 Pseudomonas stutzeri A1501 5096055 YP_001173575.1 CDS alc NC_009434.1 3329126 3330121 D catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase 3329126..3330121 Pseudomonas stutzeri A1501 5096056 YP_001173576.1 CDS allA NC_009434.1 3330221 3330733 D catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 3330221..3330733 Pseudomonas stutzeri A1501 5096057 YP_001173577.1 CDS PST_3097 NC_009434.1 3330817 3332046 D Code: S; COG: COG3748; hypothetical protein 3330817..3332046 Pseudomonas stutzeri A1501 5096058 YP_001173578.1 CDS PST_3098 NC_009434.1 3332517 3335261 D Code: P; COG: COG0474; cation-transporting P-type ATPase 3332517..3335261 Pseudomonas stutzeri A1501 5096059 YP_001173579.1 CDS PST_3099 NC_009434.1 3335753 3336562 D Code: M; COG: COG3248; nucleoside-binding outer membrane protein 3335753..3336562 Pseudomonas stutzeri A1501 5096060 YP_001173580.1 CDS PST_3100 NC_009434.1 3336653 3338584 R Code: NT; COG: COG0840; methyl-accepting chemotaxis transducer complement(3336653..3338584) Pseudomonas stutzeri A1501 5096061 YP_001173581.1 CDS PST_3101 NC_009434.1 3338808 3339428 D Code: K; COG: COG1309; TetR family transcriptional regulator 3338808..3339428 Pseudomonas stutzeri A1501 5096062 YP_001173582.1 CDS PST_3102 NC_009434.1 3339552 3341180 D Code: GEPR; COG: COG0477; transporter 3339552..3341180 Pseudomonas stutzeri A1501 5096063 YP_001173583.1 CDS PST_3103 NC_009434.1 3341177 3342292 D Code: V; COG: COG1566; multidrug resistance efflux pump 3341177..3342292 Pseudomonas stutzeri A1501 5096064 YP_001173584.1 CDS PST_3104 NC_009434.1 3342606 3343643 R putative transposase complement(3342606..3343643) Pseudomonas stutzeri A1501 5096065 YP_001173585.1 CDS oprJ NC_009434.1 3343662 3344795 D Code: MU; COG: COG1538; outer membrane protein OprJ 3343662..3344795 Pseudomonas stutzeri A1501 5096066 YP_001173586.1 CDS PST_3106 NC_009434.1 3344856 3345308 R NAD-dependent aldehyde dehydrogenase complement(3344856..3345308) Pseudomonas stutzeri A1501 5096067 YP_001173587.1 CDS PST_3107 NC_009434.1 3345445 3346698 R EAL domain-containing protein complement(3345445..3346698) Pseudomonas stutzeri A1501 5096068 YP_001173588.1 CDS PST_3108 NC_009434.1 3346835 3347533 R Code: L; COG: COG0708; exodeoxyribonuclease III complement(3346835..3347533) Pseudomonas stutzeri A1501 5096069 YP_001173589.1 CDS PST_3109 NC_009434.1 3347702 3349060 R Code: T; COG: COG0642; heavy metal sensor histidine kinase complement(3347702..3349060) Pseudomonas stutzeri A1501 5096070 YP_001173590.1 CDS irlR NC_009434.1 3349057 3349575 R Code: TK; COG: COG0745; two-component response regulator complement(3349057..3349575) Pseudomonas stutzeri A1501 5096071 YP_001173591.1 CDS PST_3111 NC_009434.1 3349872 3350375 D Code: R; COG: COG3193; hypothetical protein 3349872..3350375 Pseudomonas stutzeri A1501 5096072 YP_001173592.1 CDS PST_3112 NC_009434.1 3350392 3350802 D Code: R; COG: COG2351; transthyretin family protein 3350392..3350802 Pseudomonas stutzeri A1501 5096073 YP_001173593.1 CDS PST_3113 NC_009434.1 3350808 3351716 R Code: K; COG: COG0583; LysR family transcriptional regulator complement(3350808..3351716) Pseudomonas stutzeri A1501 5096074 YP_001173594.1 CDS gcl NC_009434.1 3351969 3353750 D catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 3351969..3353750 Pseudomonas stutzeri A1501 5096075 YP_001173595.1 CDS PST_3115 NC_009434.1 3353924 3354706 D Code: G; COG: COG3622; hydroxypyruvate isomerase 3353924..3354706 Pseudomonas stutzeri A1501 5096076 YP_001173596.1 CDS glxR NC_009434.1 3354779 3355669 D Code: I; COG: COG2084; 2-hydroxy-3-oxopropionate reductase 3354779..3355669 Pseudomonas stutzeri A1501 5096077 YP_001173597.1 CDS PST_3117 NC_009434.1 3355689 3357269 D Code: G; COG: COG2379; hydroxypyruvate reductase 3355689..3357269 Pseudomonas stutzeri A1501 5096078 YP_001173598.1 CDS pykF NC_009434.1 3357326 3358753 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 3357326..3358753 Pseudomonas stutzeri A1501 5096079 YP_001173599.1 CDS PST_3119 NC_009434.1 3358934 3359695 D transporter 3358934..3359695 Pseudomonas stutzeri A1501 5096080 YP_001173600.1 CDS PST_3120 NC_009434.1 3359751 3360062 D hypothetical protein 3359751..3360062 Pseudomonas stutzeri A1501 5096081 YP_001173601.1 CDS hmpA NC_009434.1 3360059 3361366 D flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 3360059..3361366 Pseudomonas stutzeri A1501 5096082 YP_001173602.1 CDS PST_3122 NC_009434.1 3361416 3361673 D hypothetical protein 3361416..3361673 Pseudomonas stutzeri A1501 5096083 YP_001173603.1 CDS PST_3123 NC_009434.1 3361887 3362057 D general stress protein 3361887..3362057 Pseudomonas stutzeri A1501 5096084 YP_001173604.1 CDS PST_3124 NC_009434.1 3362187 3362342 D hypothetical protein 3362187..3362342 Pseudomonas stutzeri A1501 5096085 YP_001173605.1 CDS pncB1 NC_009434.1 3362462 3363661 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 3362462..3363661 Pseudomonas stutzeri A1501 5096086 YP_001173606.1 CDS PST_3126 NC_009434.1 3363690 3364886 R Code: T; COG: COG2199; diguanylate cyclase complement(3363690..3364886) Pseudomonas stutzeri A1501 5096087 YP_001173607.1 CDS PST_3127 NC_009434.1 3365243 3367153 D esterase EstA 3365243..3367153 Pseudomonas stutzeri A1501 5096088 YP_001173608.1 CDS PST_3128 NC_009434.1 3367211 3368110 R chromosome segregation ATPase complement(3367211..3368110) Pseudomonas stutzeri A1501 5096089 YP_001173609.1 CDS PST_3129 NC_009434.1 3368471 3368743 D hypothetical protein 3368471..3368743 Pseudomonas stutzeri A1501 5096090 YP_001173610.1 CDS iciA NC_009434.1 3368754 3369644 R specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein complement(3368754..3369644) Pseudomonas stutzeri A1501 5096091 YP_001173611.1 CDS PST_3131 NC_009434.1 3369737 3370345 D Code: R; COG: COG1279; amino acid transporter LysE 3369737..3370345 Pseudomonas stutzeri A1501 5096092 YP_001173612.1 CDS sodB NC_009434.1 3370748 3371329 D Code: P; COG: COG0605; superoxide dismutase 3370748..3371329 Pseudomonas stutzeri A1501 5096093 YP_001173613.1 CDS PST_3133 NC_009434.1 3371698 3373680 D diguanylate cyclase 3371698..3373680 Pseudomonas stutzeri A1501 5096094 YP_001173614.1 CDS PST_3134 NC_009434.1 3373786 3374469 D Code: E; COG: COG0421; spermidine synthase 3373786..3374469 Pseudomonas stutzeri A1501 5096095 YP_001173615.1 CDS PST_3135 NC_009434.1 3374475 3375368 R hypothetical protein complement(3374475..3375368) Pseudomonas stutzeri A1501 5096096 YP_001173616.1 CDS PST_3136 NC_009434.1 3375370 3375942 R Code: S; COG: COG1704; LemA family protein complement(3375370..3375942) Pseudomonas stutzeri A1501 5096097 YP_001173617.1 CDS PST_3137 NC_009434.1 3376110 3377444 D Code: P; COG: COG3487; iron-regulated protein A 3376110..3377444 Pseudomonas stutzeri A1501 5096098 YP_001173618.1 CDS PST_3138 NC_009434.1 3377612 3379030 D Code: C; COG: COG3488; thiol oxidoreductase 3377612..3379030 Pseudomonas stutzeri A1501 5096099 YP_001173619.1 CDS PST_3139 NC_009434.1 3379099 3380175 D Code: R; COG: COG3489; putative lipoprotein 3379099..3380175 Pseudomonas stutzeri A1501 5096100 YP_001173620.1 CDS PST_3140 NC_009434.1 3380177 3381271 D Code: S; COG: COG3490; putative lipoprotein 3380177..3381271 Pseudomonas stutzeri A1501 5096101 YP_001173621.1 CDS PST_3141 NC_009434.1 3381356 3382978 D Code: NT; COG: COG0840; methyl-accepting chemotaxis protein 3381356..3382978 Pseudomonas stutzeri A1501 5096102 YP_001173622.1 CDS PST_3142 NC_009434.1 3383201 3384334 D Code: M; COG: COG0845; RND efflux membrane fusion protein 3383201..3384334 Pseudomonas stutzeri A1501 5096103 YP_001173623.1 CDS PST_3143 NC_009434.1 3384626 3387445 D MexW; inner membrane protein; member of RND (resistance, nodulation, and division) family; involved in resistance to fluoroquinolones, tetracycline, chloramphenicol, erythromycin, ethidium bromide, and acriflavine; functions along with MexV and OprM; multidrug efflux protein 3384626..3387445 Pseudomonas stutzeri A1501 5096104 YP_001173624.1 CDS PST_3144 NC_009434.1 3387457 3387678 R hypothetical protein complement(3387457..3387678) Pseudomonas stutzeri A1501 5096105 YP_001173625.1 CDS groEL NC_009434.1 3387837 3389477 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(3387837..3389477) Pseudomonas stutzeri A1501 5096106 YP_001173626.1 CDS groES NC_009434.1 3389525 3389818 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(3389525..3389818) Pseudomonas stutzeri A1501 5096107 YP_001173627.1 CDS fxsA NC_009434.1 3390067 3390576 R F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein complement(3390067..3390576) Pseudomonas stutzeri A1501 5096108 YP_001173628.1 CDS PST_3148 NC_009434.1 3390657 3391364 R Code: P; COG: COG0748; putative heme iron utilization protein complement(3390657..3391364) Pseudomonas stutzeri A1501 5096109 YP_001173629.1 CDS fabG NC_009434.1 3391465 3392223 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 3391465..3392223 Pseudomonas stutzeri A1501 5096110 YP_001173630.1 CDS PST_3150 NC_009434.1 3392294 3393298 R hypothetical protein complement(3392294..3393298) Pseudomonas stutzeri A1501 5096111 YP_001173631.1 CDS ampG NC_009434.1 3393833 3395533 D Code: GEPR; COG: COG0477; muropeptide permease AmpG 3393833..3395533 Pseudomonas stutzeri A1501 5096112 YP_001173632.1 CDS PST_3152 NC_009434.1 3395583 3396407 R Code: M; COG: COG0668; mechanosensitive ion channel family protein complement(3395583..3396407) Pseudomonas stutzeri A1501 5096113 YP_001173633.1 CDS PST_3153 NC_009434.1 3396497 3396976 R putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein complement(3396497..3396976) Pseudomonas stutzeri A1501 5096114 YP_001173634.1 CDS PST_3154 NC_009434.1 3397127 3398092 D Code: T; COG: COG3706; two-component response regulator 3397127..3398092 Pseudomonas stutzeri A1501 5096115 YP_001173635.1 CDS panE-2 NC_009434.1 3398097 3399008 D catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 3398097..3399008 Pseudomonas stutzeri A1501 5096116 YP_001173636.1 CDS PST_3156 NC_009434.1 3399055 3401070 D Code: T; COG: COG0642; sensory box histidine kinase/response regulator 3399055..3401070 Pseudomonas stutzeri A1501 5096117 YP_001173637.1 CDS PST_3157 NC_009434.1 3401084 3401674 D Code: S; COG: COG2096; ATP:cob(I)alamin adenosyltransferase 3401084..3401674 Pseudomonas stutzeri A1501 5096118 YP_001173638.1 CDS PST_3158 NC_009434.1 3401667 3402695 D preprotein translocase subunit SecA 3401667..3402695 Pseudomonas stutzeri A1501 5096119 YP_001173639.1 CDS PST_3159 NC_009434.1 3402860 3403639 R Code: R; COG: COG1073; prolyl oligopeptidase family protein complement(3402860..3403639) Pseudomonas stutzeri A1501 5096120 YP_001173640.1 CDS PST_3160 NC_009434.1 3403626 3404948 R biotin carboxylase complement(3403626..3404948) Pseudomonas stutzeri A1501 5096121 YP_001173641.1 CDS ahpF-2 NC_009434.1 3404985 3406547 R Code: O; COG: COG3634; alkyl hydroperoxide reductase subunit F complement(3404985..3406547) Pseudomonas stutzeri A1501 5096122 YP_001173642.1 CDS ahpC NC_009434.1 3406668 3407231 R Code: O; COG: COG0450; alkyl hydroperoxide reductase subunit C complement(3406668..3407231) Pseudomonas stutzeri A1501 5096123 YP_001173643.1 CDS PST_3163 NC_009434.1 3407400 3408341 R hypothetical protein complement(3407400..3408341) Pseudomonas stutzeri A1501 5096124 YP_001173644.1 CDS PST_3164 NC_009434.1 3408338 3408970 R Code: O; COG: COG0625; glutathione S-transferase complement(3408338..3408970) Pseudomonas stutzeri A1501 5096125 YP_001173645.1 CDS argJ NC_009434.1 3409094 3410311 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(3409094..3410311) Pseudomonas stutzeri A1501 5096126 YP_001173646.1 CDS secA NC_009434.1 3410426 3413185 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA complement(3410426..3413185) Pseudomonas stutzeri A1501 5096127 YP_001173647.1 CDS PST_3167 NC_009434.1 3413461 3413916 D Code: S; COG: COG4701; hypothetical protein 3413461..3413916 Pseudomonas stutzeri A1501 5096128 YP_001173648.1 CDS PST_3168 NC_009434.1 3413974 3414501 D hypothetical protein 3413974..3414501 Pseudomonas stutzeri A1501 5096129 YP_001173649.1 CDS PST_3169 NC_009434.1 3414598 3414852 D Code: S; COG: COG3141; hypothetical protein 3414598..3414852 Pseudomonas stutzeri A1501 5096130 YP_001173650.1 CDS PST_3170 NC_009434.1 3414973 3415242 D hypothetical protein 3414973..3415242 Pseudomonas stutzeri A1501 5096131 YP_001173651.1 CDS PST_3171 NC_009434.1 3415410 3418028 R Code: K; COG: COG2909; transcriptional regulator complement(3415410..3418028) Pseudomonas stutzeri A1501 5096132 YP_001173652.1 CDS PST_3172 NC_009434.1 3418278 3419579 R hypothetical protein complement(3418278..3419579) Pseudomonas stutzeri A1501 5096133 YP_001173653.1 CDS PST_3173 NC_009434.1 3419737 3421542 R type V secretory pathway, adhesin AidA complement(3419737..3421542) Pseudomonas stutzeri A1501 5096134 YP_001173654.1 CDS hpt NC_009434.1 3422111 3422668 R Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase complement(3422111..3422668) Pseudomonas stutzeri A1501 5096135 YP_001173655.1 CDS upp NC_009434.1 3422927 3423565 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 3422927..3423565 Pseudomonas stutzeri A1501 5096136 YP_001173656.1 CDS uraA NC_009434.1 3423568 3424827 D Code: F; COG: COG2233; uracil permease 3423568..3424827 Pseudomonas stutzeri A1501 5096137 YP_001173657.1 CDS PST_3177 NC_009434.1 3424916 3425227 D Fe-S-cluster oxidoreductase 3424916..3425227 Pseudomonas stutzeri A1501 5096138 YP_001173658.1 CDS PST_3178 NC_009434.1 3425285 3425914 R NAD-dependent aldehyde dehydrogenase complement(3425285..3425914) Pseudomonas stutzeri A1501 5096139 YP_001173659.1 CDS murI NC_009434.1 3425886 3426680 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(3425886..3426680) Pseudomonas stutzeri A1501 5096140 YP_001173660.1 CDS moeB NC_009434.1 3426673 3427428 R ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB complement(3426673..3427428) Pseudomonas stutzeri A1501 5096141 YP_001173661.1 CDS hemK NC_009434.1 3427451 3428278 R Code: J; COG: COG2890; methyl transferase complement(3427451..3428278) Pseudomonas stutzeri A1501 5096142 YP_001173662.1 CDS prfA NC_009434.1 3428313 3429395 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(3428313..3429395) Pseudomonas stutzeri A1501 5096143 YP_001173663.1 CDS hemA NC_009434.1 3429392 3430660 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(3429392..3430660) Pseudomonas stutzeri A1501 5096144 YP_001173664.1 CDS PST_3184 NC_009434.1 3430800 3432584 D Code: R; COG: COG0457; hypothetical protein 3430800..3432584 Pseudomonas stutzeri A1501 5096145 YP_001173665.1 CDS lolB NC_009434.1 3432588 3433208 D Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 3432588..3433208 Pseudomonas stutzeri A1501 5096146 YP_001173666.1 CDS ipk NC_009434.1 3433209 3434063 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 3433209..3434063 Pseudomonas stutzeri A1501 5096147 YP_001173667.1 CDS prsA NC_009434.1 3434381 3435310 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 3434381..3435310 Pseudomonas stutzeri A1501 5096150 YP_001173668.1 CDS PST_3190 NC_009434.1 3435430 3436047 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 3435430..3436047 Pseudomonas stutzeri A1501 5096151 YP_001173669.1 CDS pth NC_009434.1 3436285 3436665 D Code: J; COG: COG0193; peptidyl-tRNA hydrolase 3436285..3436665 Pseudomonas stutzeri A1501 5096152 YP_001173670.1 CDS ychF NC_009434.1 3436690 3437790 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3436690..3437790 Pseudomonas stutzeri A1501 5096153 YP_001173671.1 CDS PST_3193 NC_009434.1 3437829 3439196 D Code: L; COG: COG0582; phage integrase family site specific recombinase 3437829..3439196 Pseudomonas stutzeri A1501 5096154 YP_001173672.1 CDS PST_3194 NC_009434.1 3439457 3440518 D fic family protein 3439457..3440518 Pseudomonas stutzeri A1501 5096155 YP_001173673.1 CDS PST_3195 NC_009434.1 3440515 3443823 D Code: KL; COG: COG0553; ATP-dependent helicase HEPA 3440515..3443823 Pseudomonas stutzeri A1501 5096156 YP_001173674.1 CDS PST_3196 NC_009434.1 3443813 3447541 D hypothetical protein 3443813..3447541 Pseudomonas stutzeri A1501 5096157 YP_001173675.1 CDS PST_3197 NC_009434.1 3449330 3451201 D hypothetical protein 3449330..3451201 Pseudomonas stutzeri A1501 5096158 YP_001173676.1 CDS PST_3198 NC_009434.1 3451198 3452655 D piwi domain-containing protein 3451198..3452655 Pseudomonas stutzeri A1501 5096159 YP_001173677.1 CDS PST_3199 NC_009434.1 3452660 3453523 R integrase complement(3452660..3453523) Pseudomonas stutzeri A1501 5096160 YP_001173678.1 CDS PST_3200 NC_009434.1 3453940 3454230 D hypothetical protein 3453940..3454230 Pseudomonas stutzeri A1501 5096161 YP_001173679.1 CDS PST_3201 NC_009434.1 3454227 3454571 D Code: L; COG: COG3436; ISPsy5, Orf1 3454227..3454571 Pseudomonas stutzeri A1501 5096162 YP_001173680.1 CDS PST_3202 NC_009434.1 3454693 3456231 D Code: L; COG: COG3436; ISPpu14, transposase Orf3 3454693..3456231 Pseudomonas stutzeri A1501 5096163 YP_001173681.1 CDS PST_3203 NC_009434.1 3456695 3457096 R hypothetical protein complement(3456695..3457096) Pseudomonas stutzeri A1501 5096164 YP_001173682.1 CDS PST_3204 NC_009434.1 3457774 3458781 R Code: E; COG: COG4177; branched-chain amino acid ABC transporter permease complement(3457774..3458781) Pseudomonas stutzeri A1501 5096165 YP_001173683.1 CDS PST_3205 NC_009434.1 3458784 3459671 R Code: E; COG: COG0559; branched-chain amino acid ABC transporter permease complement(3458784..3459671) Pseudomonas stutzeri A1501 5096166 YP_001173684.1 CDS PST_3206 NC_009434.1 3459741 3460793 R Code: E; COG: COG0683; ABC transporter substrate-binding protein complement(3459741..3460793) Pseudomonas stutzeri A1501 5096167 YP_001173685.1 CDS PST_3207 NC_009434.1 3461030 3461746 R Code: E; COG: COG0410; branched-chain amino acid ABC transporter ATP-binding protein complement(3461030..3461746) Pseudomonas stutzeri A1501 5096168 YP_001173686.1 CDS braF-2 NC_009434.1 3461743 3462519 R Code: E; COG: COG0411; branched-chain amino acid transport protein BraF complement(3461743..3462519) Pseudomonas stutzeri A1501 5096169 YP_001173687.1 CDS PST_3209 NC_009434.1 3462841 3464115 R porin complement(3462841..3464115) Pseudomonas stutzeri A1501 5096170 YP_001173688.1 CDS PST_3210 NC_009434.1 3464218 3464823 R Code: S; COG: COG2128; alkylhydroperoxidase complement(3464218..3464823) Pseudomonas stutzeri A1501 5096171 YP_001173689.1 CDS PST_3211 NC_009434.1 3464881 3466563 R activates fatty acids by binding to coenzyme A; AMP-binding protein complement(3464881..3466563) Pseudomonas stutzeri A1501 5096172 YP_001173690.1 CDS PST_3212 NC_009434.1 3466870 3467997 R UV damage repair endonuclease complement(3466870..3467997) Pseudomonas stutzeri A1501 5096173 YP_001173691.1 CDS PST_3213 NC_009434.1 3468208 3469371 D Code: I; COG: COG1960; isovaleryl-CoA dehydrogenase 3468208..3469371 Pseudomonas stutzeri A1501 5096174 YP_001173692.1 CDS PST_3214 NC_009434.1 3469481 3471088 D Code: I; COG: COG4799; acyl-CoA carboxyltransferase subunit beta 3469481..3471088 Pseudomonas stutzeri A1501 5096175 YP_001173693.1 CDS PST_3215 NC_009434.1 3471146 3471943 D catalyzes the hydration of gamma-carboxygeranoyl-CoA to 3-hydroxy-gamma-carboxygeranoyl-CoA; gamma-carboxygeranoyl-CoA hydratase 3471146..3471943 Pseudomonas stutzeri A1501 5096176 YP_001173694.1 CDS PST_3216 NC_009434.1 3471943 3473853 D Code: I; COG: COG4770; acetyl-CoA carboxylase, biotin carboxylase 3471943..3473853 Pseudomonas stutzeri A1501 5096177 YP_001173695.1 CDS PST_3217 NC_009434.1 3474016 3474915 D catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase 3474016..3474915 Pseudomonas stutzeri A1501 5096178 YP_001173696.1 CDS PST_3218 NC_009434.1 3475001 3475696 D Code: I; COG: COG1788; CoA transferase, subunit A 3475001..3475696 Pseudomonas stutzeri A1501 5096179 YP_001173697.1 CDS PST_3219 NC_009434.1 3475701 3476330 D Code: I; COG: COG2057; CoA transferase subunit B 3475701..3476330 Pseudomonas stutzeri A1501 5096180 YP_001173698.1 CDS PST_3220 NC_009434.1 3476588 3477769 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3476588..3477769 Pseudomonas stutzeri A1501 5096181 YP_001173699.1 CDS PST_3221 NC_009434.1 3477843 3478241 D Code: K; COG: COG0789; transcriptional regulator 3477843..3478241 Pseudomonas stutzeri A1501 5096182 YP_001173700.1 CDS PST_3222 NC_009434.1 3478647 3479732 D Code: Q; COG: COG4663; transporter, periplasmic protein 3478647..3479732 Pseudomonas stutzeri A1501 5096183 YP_001173701.1 CDS PST_3223 NC_009434.1 3479808 3480410 D Code: Q; COG: COG4665; hypothetical protein 3479808..3480410 Pseudomonas stutzeri A1501 5096184 YP_001173702.1 CDS PST_3224 NC_009434.1 3480427 3481797 D Code: Q; COG: COG4664; C4-dicarboxylate transporter 3480427..3481797 Pseudomonas stutzeri A1501 5096185 YP_001173703.1 CDS PST_3225 NC_009434.1 3481874 3483373 D Code: KT; COG: COG3829; transcriptional regulator 3481874..3483373 Pseudomonas stutzeri A1501 5096186 YP_001173704.1 CDS PST_3226 NC_009434.1 3483485 3483883 D Code: S; COG: COG2259; hypothetical protein 3483485..3483883 Pseudomonas stutzeri A1501 5096187 YP_001173705.1 CDS PST_3227 NC_009434.1 3484135 3487386 D hypothetical protein 3484135..3487386 Pseudomonas stutzeri A1501 5096188 YP_001173706.1 CDS PST_3228 NC_009434.1 3488057 3489544 R Code: L; COG: COG3436; ISPsy5, transposase complement(3488057..3489544) Pseudomonas stutzeri A1501 5096189 YP_001173707.1 CDS PST_3229 NC_009434.1 3489638 3489997 R Code: L; COG: COG3436; ISPpu13, transposase Orf1 complement(3489638..3489997) Pseudomonas stutzeri A1501 5096190 YP_001173708.1 CDS PST_3230 NC_009434.1 3490363 3491052 R DNA-methyltransferase complement(3490363..3491052) Pseudomonas stutzeri A1501 5096191 YP_001173709.1 CDS PST_3231 NC_009434.1 3491286 3492971 R hypothetical protein complement(3491286..3492971) Pseudomonas stutzeri A1501 5096192 YP_001173710.1 CDS PST_3233 NC_009434.1 3494047 3494946 R Code: GER; COG: COG0697; hypothetical protein complement(3494047..3494946) Pseudomonas stutzeri A1501 5096194 YP_001173711.1 CDS PST_3234 NC_009434.1 3494946 3495590 R Code: P; COG: COG0288; carbonic anhydrase complement(3494946..3495590) Pseudomonas stutzeri A1501 5096195 YP_001173712.1 CDS PST_3235 NC_009434.1 3495671 3497086 R Code: G; COG: COG0380; alpha,alpha-trehalose-phosphate synthase complement(3495671..3497086) Pseudomonas stutzeri A1501 5096196 YP_001173713.1 CDS PST_3236 NC_009434.1 3497103 3497879 R Code: G; COG: COG1877; trehalose-6-phosphate phophatase, biosynthetic complement(3497103..3497879) Pseudomonas stutzeri A1501 5096197 YP_001173714.1 CDS PST_3237 NC_009434.1 3498060 3498602 D hypothetical protein 3498060..3498602 Pseudomonas stutzeri A1501 5096198 YP_001173715.1 CDS rimI NC_009434.1 3499015 3499467 R Code: R; COG: COG0456; peptide n-acetyltransferase RimI complement(3499015..3499467) Pseudomonas stutzeri A1501 5096199 YP_001173716.1 CDS PST_3239 NC_009434.1 3499477 3500247 R hypothetical protein complement(3499477..3500247) Pseudomonas stutzeri A1501 5096200 YP_001173717.1 CDS PST_3240 NC_009434.1 3500283 3501827 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(3500283..3501827) Pseudomonas stutzeri A1501 5096201 YP_001173718.1 CDS PST_3241 NC_009434.1 3502208 3503401 R Code: E; COG: COG1748; catalase complement(3502208..3503401) Pseudomonas stutzeri A1501 5096202 YP_001173719.1 CDS nspC NC_009434.1 3503473 3504570 R Code: E; COG: COG0019; carboxynorspermidine decarboxylase complement(3503473..3504570) Pseudomonas stutzeri A1501 5096203 YP_001173720.1 CDS PST_3243 NC_009434.1 3504810 3506096 D hypothetical protein 3504810..3506096 Pseudomonas stutzeri A1501 5096204 YP_001173721.1 CDS PST_3244 NC_009434.1 3506163 3506864 D hypothetical protein 3506163..3506864 Pseudomonas stutzeri A1501 5096205 YP_001173722.1 CDS PST_3245 NC_009434.1 3506861 3509695 D chromosome segregation ATPase 3506861..3509695 Pseudomonas stutzeri A1501 5096206 YP_001173723.1 CDS PST_3246 NC_009434.1 3509799 3512108 R Code: R; COG: COG3008; PqiB family protein complement(3509799..3512108) Pseudomonas stutzeri A1501 5096207 YP_001173724.1 CDS PST_3247 NC_009434.1 3512101 3512724 R paraquat-inducible protein A complement(3512101..3512724) Pseudomonas stutzeri A1501 5096208 YP_001173725.1 CDS PST_3248 NC_009434.1 3512711 3513367 R paraquat-inducible protein A complement(3512711..3513367) Pseudomonas stutzeri A1501 5096209 YP_001173726.1 CDS PST_3253 NC_009434.1 3519572 3520195 R in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ complement(3519572..3520195) Pseudomonas stutzeri A1501 5096214 YP_001173727.1 CDS PST_3254 NC_009434.1 3520195 3521202 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY complement(3520195..3521202) Pseudomonas stutzeri A1501 5096215 YP_001173728.1 CDS pssA NC_009434.1 3521257 3522096 R Code: I; COG: COG1183; phosphatidylserine synthase complement(3521257..3522096) Pseudomonas stutzeri A1501 5096216 YP_001173729.1 CDS ilvC NC_009434.1 3522250 3523266 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(3522250..3523266) Pseudomonas stutzeri A1501 5096217 YP_001173730.1 CDS ilvH NC_009434.1 3523343 3523834 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(3523343..3523834) Pseudomonas stutzeri A1501 5096218 YP_001173731.1 CDS ilvI NC_009434.1 3523837 3525537 R catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; acetolactate synthase 3 catalytic subunit complement(3523837..3525537) Pseudomonas stutzeri A1501 5096219 YP_001173732.1 CDS PST_3259 NC_009434.1 3525931 3526401 D hypothetical protein 3525931..3526401 Pseudomonas stutzeri A1501 5096220 YP_001173733.1 CDS PST_3260 NC_009434.1 3526438 3526764 R Code: S; COG: COG3098; hypothetical protein complement(3526438..3526764) Pseudomonas stutzeri A1501 5096221 YP_001173734.1 CDS PST_3261 NC_009434.1 3526764 3527432 R hypothetical protein complement(3526764..3527432) Pseudomonas stutzeri A1501 5096222 YP_001173735.1 CDS mrcB NC_009434.1 3527541 3529853 R Code: M; COG: COG0744; penicillin-binding protein complement(3527541..3529853) Pseudomonas stutzeri A1501 5096223 YP_001173736.1 CDS PST_3263 NC_009434.1 3529932 3531575 D Code: S; COG: COG2187; hypothetical protein 3529932..3531575 Pseudomonas stutzeri A1501 5096224 YP_001173737.1 CDS PST_3264 NC_009434.1 3531642 3532430 D Code: QR; COG: COG0500; SAM-dependent methyltransferase 3531642..3532430 Pseudomonas stutzeri A1501 5096225 YP_001173738.1 CDS PST_3265 NC_009434.1 3532449 3532712 D Code: K; COG: COG3070; competence-specific genes regulator 3532449..3532712 Pseudomonas stutzeri A1501 5096226 YP_001173739.1 CDS PST_3266 NC_009434.1 3532738 3533622 D Code: T; COG: COG0664; cAMP-dependent protein kinase 3532738..3533622 Pseudomonas stutzeri A1501 5096227 YP_001173740.1 CDS PST_3267 NC_009434.1 3533844 3534728 R Code: S; COG: COG3016; putative lipoprotein complement(3533844..3534728) Pseudomonas stutzeri A1501 5096228 YP_001173741.1 CDS hmuV NC_009434.1 3534740 3535507 R with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit complement(3534740..3535507) Pseudomonas stutzeri A1501 5096229 YP_001173742.1 CDS PST_3269 NC_009434.1 3535507 3536676 R Code: P; COG: COG0609; ABC transporter permease complement(3535507..3536676) Pseudomonas stutzeri A1501 5096230 YP_001173743.1 CDS PST_3270 NC_009434.1 3536678 3537013 D Code: PR; COG: COG2146; Rieske family iron-sulfur cluster-binding protein 3536678..3537013 Pseudomonas stutzeri A1501 5096231 YP_001173744.1 CDS dipZ NC_009434.1 3537045 3538841 D two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 3537045..3538841 Pseudomonas stutzeri A1501 5096232 YP_001173745.1 CDS aroQ NC_009434.1 3539053 3539496 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3539053..3539496 Pseudomonas stutzeri A1501 5096233 YP_001173746.1 CDS accB NC_009434.1 3539573 3540031 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3539573..3540031 Pseudomonas stutzeri A1501 5096234 YP_001173747.1 CDS accC NC_009434.1 3540049 3541398 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 3540049..3541398 Pseudomonas stutzeri A1501 5096235 YP_001173748.1 CDS prmA NC_009434.1 3541467 3542429 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 3541467..3542429 Pseudomonas stutzeri A1501 5096236 YP_001173749.1 CDS PST_3276 NC_009434.1 3542542 3543777 D hypothetical protein 3542542..3543777 Pseudomonas stutzeri A1501 5096237 YP_001173750.1 CDS PST_3277 NC_009434.1 3543975 3544988 D Code: J; COG: COG0042; NifR3 family TIM-barrel protein 3543975..3544988 Pseudomonas stutzeri A1501 5096238 YP_001173751.1 CDS fis NC_009434.1 3544985 3545305 D Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 3544985..3545305 Pseudomonas stutzeri A1501 5096239 YP_001173752.1 CDS purH NC_009434.1 3545382 3546986 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3545382..3546986 Pseudomonas stutzeri A1501 5096240 YP_001173753.1 CDS purD NC_009434.1 3547186 3548478 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 3547186..3548478 Pseudomonas stutzeri A1501 5096241 YP_001173754.1 CDS PST_3281 NC_009434.1 3548553 3551396 D sensor/response regulator hybrid 3548553..3551396 Pseudomonas stutzeri A1501 5096242 YP_001173755.1 CDS PST_3282 NC_009434.1 3551418 3552668 R Code: Q; COG: COG2124; fatty acid alpha hydroxylase complement(3551418..3552668) Pseudomonas stutzeri A1501 5096243 YP_001173756.1 CDS PST_3283 NC_009434.1 3552872 3553819 D Code: S; COG: COG0392; hypothetical protein 3552872..3553819 Pseudomonas stutzeri A1501 5096244 YP_001173757.1 CDS PST_3284 NC_009434.1 3553929 3554660 D major facilitator superfamily permease 3553929..3554660 Pseudomonas stutzeri A1501 5096245 YP_001173758.1 CDS PST_3285 NC_009434.1 3554899 3555798 R Code: R; COG: COG0679; permease complement(3554899..3555798) Pseudomonas stutzeri A1501 5096246 YP_001173759.1 CDS PST_3286 NC_009434.1 3555903 3556823 R Code: M; COG: COG1091; dTDP-4-dehydrorhamnose reductase complement(3555903..3556823) Pseudomonas stutzeri A1501 5096247 YP_001173760.1 CDS sfsA NC_009434.1 3557083 3557700 R Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A complement(3557083..3557700) Pseudomonas stutzeri A1501 5096248 YP_001173761.1 CDS PST_3288 NC_009434.1 3557790 3559025 R Code: E; COG: COG0436; hypothetical protein complement(3557790..3559025) Pseudomonas stutzeri A1501 5096249 YP_001173762.1 CDS dksA NC_009434.1 3559154 3559600 D Code: T; COG: COG1734; suppressor protein DksA 3559154..3559600 Pseudomonas stutzeri A1501 5096250 YP_001173763.1 CDS PST_3290 NC_009434.1 3559690 3560595 D this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 3559690..3560595 Pseudomonas stutzeri A1501 5096251 YP_001173764.1 CDS PST_3291 NC_009434.1 3560701 3560877 D major facilitator superfamily permease 3560701..3560877 Pseudomonas stutzeri A1501 5096252 YP_001173765.1 CDS PST_3292 NC_009434.1 3560861 3563815 D Code: ER; COG: COG0591; sensor histidine kinase 3560861..3563815 Pseudomonas stutzeri A1501 5096253 YP_001173766.1 CDS PST_3293 NC_009434.1 3563877 3565292 D Code: T; COG: COG2204; two-component response regulator 3563877..3565292 Pseudomonas stutzeri A1501 5096254 YP_001173767.1 CDS pcnB NC_009434.1 3566014 3567414 D Code: J; COG: COG0617; poly(A) polymerase 3566014..3567414 Pseudomonas stutzeri A1501 5096255 YP_001173768.1 CDS folK NC_009434.1 3567392 3567943 D Code: H; COG: COG0801; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3567392..3567943 Pseudomonas stutzeri A1501 5096256 YP_001173769.1 CDS panB NC_009434.1 3568187 3568870 D Code: H; COG: COG0413; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3568187..3568870 Pseudomonas stutzeri A1501 5096257 YP_001173770.1 CDS panC NC_009434.1 3568867 3569727 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 3568867..3569727 Pseudomonas stutzeri A1501 5096258 YP_001173771.1 CDS PST_3298 NC_009434.1 3569811 3570191 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 3569811..3570191 Pseudomonas stutzeri A1501 5096259 YP_001173772.1 CDS pgi NC_009434.1 3570544 3572208 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 3570544..3572208 Pseudomonas stutzeri A1501 5096260 YP_001173773.1 CDS PST_3300 NC_009434.1 3572337 3573212 D Code: S; COG: COG3662; hypothetical protein 3572337..3573212 Pseudomonas stutzeri A1501 5096261 YP_001173774.1 CDS PST_3301 NC_009434.1 3573430 3574290 D SAM-dependent methyltransferase 3573430..3574290 Pseudomonas stutzeri A1501 5096262 YP_001173775.1 CDS PST_3302 NC_009434.1 3574418 3577210 D hypothetical protein 3574418..3577210 Pseudomonas stutzeri A1501 5096263 YP_001173776.1 CDS PST_3303 NC_009434.1 3577262 3577558 D hypothetical protein 3577262..3577558 Pseudomonas stutzeri A1501 5096264 YP_001173777.1 CDS PST_3304 NC_009434.1 3577576 3577884 D hypothetical protein 3577576..3577884 Pseudomonas stutzeri A1501 5096265 YP_001173778.1 CDS PST_3305 NC_009434.1 3577951 3578316 R Code: R; COG: COG2823; osmY-related protein complement(3577951..3578316) Pseudomonas stutzeri A1501 5096266 YP_001173779.1 CDS pnp NC_009434.1 3578587 3580692 R Code: J; COG: COG1185; polynucleotide phosphorylase/polyadenylase complement(3578587..3580692) Pseudomonas stutzeri A1501 5096267 YP_001173780.1 CDS rpsO NC_009434.1 3580860 3581129 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(3580860..3581129) Pseudomonas stutzeri A1501 5096268 YP_001173781.1 CDS truB NC_009434.1 3581245 3582162 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(3581245..3582162) Pseudomonas stutzeri A1501 5096269 YP_001173782.1 CDS rbfA NC_009434.1 3582165 3582554 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(3582165..3582554) Pseudomonas stutzeri A1501 5096270 YP_001173783.1 CDS infB NC_009434.1 3582657 3585170 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(3582657..3585170) Pseudomonas stutzeri A1501 5096271 YP_001173784.1 CDS nusA NC_009434.1 3585199 3586680 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(3585199..3586680) Pseudomonas stutzeri A1501 5096272 YP_001173785.1 CDS PST_3312 NC_009434.1 3586728 3587276 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(3586728..3587276) Pseudomonas stutzeri A1501 5096273 YP_001173786.1 CDS secG NC_009434.1 3587579 3588004 R Code: U; COG: COG1314; preprotein translocase subunit SecG complement(3587579..3588004) Pseudomonas stutzeri A1501 5096276 YP_001173787.1 CDS tpiA NC_009434.1 3587967 3588722 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(3587967..3588722) Pseudomonas stutzeri A1501 5096277 YP_001173788.1 CDS glmM NC_009434.1 3588788 3590026 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(3588788..3590026) Pseudomonas stutzeri A1501 5096278 YP_001173789.1 CDS folP NC_009434.1 3590136 3590987 R Code: H; COG: COG0294; dihydropteroate synthase complement(3590136..3590987) Pseudomonas stutzeri A1501 5096279 YP_001173790.1 CDS ftsH NC_009434.1 3591156 3592937 R Code: O; COG: COG0465; cell division protein FtsH complement(3591156..3592937) Pseudomonas stutzeri A1501 5096280 YP_001173791.1 CDS PST_3320 NC_009434.1 3593684 3593995 D Code: J; COG: COG1534; RNA-binding protein 3593684..3593995 Pseudomonas stutzeri A1501 5096281 YP_001173792.1 CDS PST_3321 NC_009434.1 3594023 3594457 R major facilitator superfamily permease complement(3594023..3594457) Pseudomonas stutzeri A1501 5096282 YP_001173793.1 CDS greA NC_009434.1 3594435 3594911 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(3594435..3594911) Pseudomonas stutzeri A1501 5096283 YP_001173794.1 CDS carB NC_009434.1 3594908 3598129 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(3594908..3598129) Pseudomonas stutzeri A1501 5096284 YP_001173795.1 CDS carA NC_009434.1 3598166 3599314 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(3598166..3599314) Pseudomonas stutzeri A1501 5096285 YP_001173796.1 CDS dapB NC_009434.1 3599531 3600337 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(3599531..3600337) Pseudomonas stutzeri A1501 5096286 YP_001173797.1 CDS dnaJ NC_009434.1 3600419 3601462 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(3600419..3601462) Pseudomonas stutzeri A1501 5096287 YP_001173798.1 CDS dnaK NC_009434.1 3601673 3603586 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(3601673..3603586) Pseudomonas stutzeri A1501 5096288 YP_001173799.1 CDS grpE NC_009434.1 3603685 3604254 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(3603685..3604254) Pseudomonas stutzeri A1501 5096289 YP_001173800.1 CDS recN NC_009434.1 3604456 3606129 D Code: L; COG: COG0497; DNA repair protein RecN 3604456..3606129 Pseudomonas stutzeri A1501 5096290 YP_001173801.1 CDS fur NC_009434.1 3606192 3606596 R Code: P; COG: COG0735; ferric uptake regulation protein complement(3606192..3606596) Pseudomonas stutzeri A1501 5096291 YP_001173802.1 CDS omlA NC_009434.1 3606599 3607204 D Code: J; COG: COG2913; outer membrane lipoprotein OmlA 3606599..3607204 Pseudomonas stutzeri A1501 5096292 YP_001173803.1 CDS PST_3332 NC_009434.1 3607245 3607559 R Code: S; COG: COG2914; hypothetical protein complement(3607245..3607559) Pseudomonas stutzeri A1501 5096293 YP_001173804.1 CDS PST_3333 NC_009434.1 3607552 3607986 R Code: I; COG: COG2867; oligoketide cyclase/lipid transporter protein complement(3607552..3607986) Pseudomonas stutzeri A1501 5096294 YP_001173805.1 CDS smpB NC_009434.1 3608193 3608675 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 3608193..3608675 Pseudomonas stutzeri A1501 5096295 YP_001173806.1 CDS PST_3335 NC_009434.1 3608728 3609519 R Code: K; COG: COG2186; GntR family transcriptional regulator complement(3608728..3609519) Pseudomonas stutzeri A1501 5096296 YP_001173807.1 CDS PST_3336 NC_009434.1 3609789 3611483 D Code: C; COG: COG1620; L-lactate permease 3609789..3611483 Pseudomonas stutzeri A1501 5096297 YP_001173808.1 CDS PST_3337 NC_009434.1 3611738 3612559 D Code: C; COG: COG0247; Fe-S oxidoreductase 3611738..3612559 Pseudomonas stutzeri A1501 5096298 YP_001173809.1 CDS PST_3338 NC_009434.1 3612556 3614016 D Code: C; COG: COG1139; iron-sulfur protein 3612556..3614016 Pseudomonas stutzeri A1501 5096299 YP_001173810.1 CDS PST_3339 NC_009434.1 3614013 3614684 D Code: S; COG: COG1556; hypothetical protein 3614013..3614684 Pseudomonas stutzeri A1501 5096300 YP_001173811.1 CDS PST_3340 NC_009434.1 3614681 3617533 D D-lactate dehydrogenase 3614681..3617533 Pseudomonas stutzeri A1501 5096301 YP_001173812.1 CDS PST_3341 NC_009434.1 3617577 3618020 D hypothetical protein 3617577..3618020 Pseudomonas stutzeri A1501 5096302 YP_001173813.1 CDS PST_3343 NC_009434.1 3619731 3621071 D integrase 3619731..3621071 Pseudomonas stutzeri A1501 5096304 YP_001173814.1 CDS PST_3344 NC_009434.1 3621234 3622493 D hypothetical protein 3621234..3622493 Pseudomonas stutzeri A1501 5096305 YP_001173815.1 CDS PST_3345 NC_009434.1 3622542 3622787 D hypothetical protein 3622542..3622787 Pseudomonas stutzeri A1501 5096306 YP_001173816.1 CDS PST_3346 NC_009434.1 3623771 3624037 D Code: L; COG: COG2801; transposase family protein 3623771..3624037 Pseudomonas stutzeri A1501 5096307 YP_001173817.1 CDS PST_3347 NC_009434.1 3624058 3624858 D Code: L; COG: COG2801; ISxac2 transposase 3624058..3624858 Pseudomonas stutzeri A1501 5096308 YP_001173818.1 CDS PST_3348 NC_009434.1 3624871 3625155 D transcriptional regulator MvaT, P16 subunit 3624871..3625155 Pseudomonas stutzeri A1501 5096309 YP_001173819.1 CDS PST_3349 NC_009434.1 3625281 3626291 R Code: L; COG: COG0389; impB/mucB/samB family protein complement(3625281..3626291) Pseudomonas stutzeri A1501 5096310 YP_001173820.1 CDS PST_3350 NC_009434.1 3626690 3627184 D Code: S; COG: COG1917; double-stranded beta-helix domain-containing protein 3626690..3627184 Pseudomonas stutzeri A1501 5096311 YP_001173821.1 CDS PST_3351 NC_009434.1 3627268 3627771 D hypothetical protein 3627268..3627771 Pseudomonas stutzeri A1501 5096312 YP_001173822.1 CDS PST_3352 NC_009434.1 3627916 3630081 R phage integrase family site specific recombinase complement(3627916..3630081) Pseudomonas stutzeri A1501 5096313 YP_001173823.1 CDS PST_3353 NC_009434.1 3630078 3631097 R integrase/recombinase XerC complement(3630078..3631097) Pseudomonas stutzeri A1501 5096314 YP_001173824.1 CDS PST_3354 NC_009434.1 3631153 3631404 R UV repair DNA polymerase complement(3631153..3631404) Pseudomonas stutzeri A1501 5096315 YP_001173825.1 CDS rulA NC_009434.1 3631391 3631822 R Code: KT; COG: COG1974; ultraviolet light resistance protein A complement(3631391..3631822) Pseudomonas stutzeri A1501 5096316 YP_001173826.1 CDS PST_3356 NC_009434.1 3631905 3632618 D Code: S; COG: COG2135; hypothetical protein 3631905..3632618 Pseudomonas stutzeri A1501 5096317 YP_001173827.1 CDS PST_3357 NC_009434.1 3633082 3633888 D Code: K; COG: COG0583; transcriptional regulator 3633082..3633888 Pseudomonas stutzeri A1501 5096318 YP_001173828.1 CDS PST_3358 NC_009434.1 3633899 3634846 R Code: C; COG: COG0667; oxidoreductase complement(3633899..3634846) Pseudomonas stutzeri A1501 5096319 YP_001173829.1 CDS PST_3359 NC_009434.1 3635645 3635779 D hypothetical protein 3635645..3635779 Pseudomonas stutzeri A1501 5096320 YP_001173830.1 CDS PST_3360 NC_009434.1 3636691 3637038 R hypothetical protein complement(3636691..3637038) Pseudomonas stutzeri A1501 5096321 YP_001173831.1 CDS czcA NC_009434.1 3637032 3640154 R Code: P; COG: COG3696; heavy metal efflux pump CzcA complement(3637032..3640154) Pseudomonas stutzeri A1501 5096322 YP_001173832.1 CDS PST_3362 NC_009434.1 3640157 3641794 R Code: M; COG: COG0845; CzcB family heavy metal RND efflux membrane fusion protein complement(3640157..3641794) Pseudomonas stutzeri A1501 5096323 YP_001173833.1 CDS PST_3363 NC_009434.1 3641791 3643077 R outer membrane protein complement(3641791..3643077) Pseudomonas stutzeri A1501 5096324 YP_001173834.1 CDS PST_3364 NC_009434.1 3643630 3644154 D hypothetical protein 3643630..3644154 Pseudomonas stutzeri A1501 5096325 YP_001173835.1 CDS PST_3365 NC_009434.1 3644169 3646361 D oxidoreductase, FAD-binding 3644169..3646361 Pseudomonas stutzeri A1501 5096326 YP_001173836.1 CDS PST_3366 NC_009434.1 3646503 3647051 D hypothetical protein 3646503..3647051 Pseudomonas stutzeri A1501 5096327 YP_001173837.1 CDS PST_3367 NC_009434.1 3647048 3647851 D hypothetical protein 3647048..3647851 Pseudomonas stutzeri A1501 5096328 YP_001173838.1 CDS PST_3368 NC_009434.1 3647863 3648198 D Code: S; COG: COG4828; hypothetical protein 3647863..3648198 Pseudomonas stutzeri A1501 5096329 YP_001173839.1 CDS PST_3369 NC_009434.1 3648432 3648761 R hypothetical protein complement(3648432..3648761) Pseudomonas stutzeri A1501 5096330 YP_001173840.1 CDS PST_3370 NC_009434.1 3649043 3649240 D hypothetical protein 3649043..3649240 Pseudomonas stutzeri A1501 5096331 YP_001173841.1 CDS PST_3371 NC_009434.1 3649772 3650107 R hypothetical protein complement(3649772..3650107) Pseudomonas stutzeri A1501 5096332 YP_001173842.1 CDS PST_3372 NC_009434.1 3650303 3650596 R hypothetical protein complement(3650303..3650596) Pseudomonas stutzeri A1501 5096333 YP_001173843.1 CDS PST_3373 NC_009434.1 3650629 3651018 D hypothetical protein 3650629..3651018 Pseudomonas stutzeri A1501 5096334 YP_001173844.1 CDS PST_3374 NC_009434.1 3651231 3651656 D hypothetical protein 3651231..3651656 Pseudomonas stutzeri A1501 5096335 YP_001173845.1 CDS PST_3375 NC_009434.1 3651832 3652023 D hypothetical protein 3651832..3652023 Pseudomonas stutzeri A1501 5096336 YP_001173846.1 CDS PST_3376 NC_009434.1 3652096 3652365 R hypothetical protein complement(3652096..3652365) Pseudomonas stutzeri A1501 5096337 YP_001173847.1 CDS PST_3377 NC_009434.1 3652355 3653893 R Code: L; COG: COG3436; ISPpu14, transposase Orf3 complement(3652355..3653893) Pseudomonas stutzeri A1501 5096338 YP_001173848.1 CDS PST_3378 NC_009434.1 3654015 3654359 R Code: L; COG: COG3436; ISPsy5, Orf1 complement(3654015..3654359) Pseudomonas stutzeri A1501 5096339 YP_001173849.1 CDS PST_3379 NC_009434.1 3654356 3654646 R hypothetical protein complement(3654356..3654646) Pseudomonas stutzeri A1501 5096340 YP_001173850.1 CDS PST_3380 NC_009434.1 3654694 3655344 R cytochrome c family protein complement(3654694..3655344) Pseudomonas stutzeri A1501 5096341 YP_001173851.1 CDS copB NC_009434.1 3655353 3656513 R Code: P; COG: COG3667; copper resistance protein B complement(3655353..3656513) Pseudomonas stutzeri A1501 5096342 YP_001173852.1 CDS PST_3382 NC_009434.1 3656503 3656814 R hypothetical protein complement(3656503..3656814) Pseudomonas stutzeri A1501 5096343 YP_001173853.1 CDS copA NC_009434.1 3656827 3658707 R Code: Q; COG: COG2132; copper resistance protein A complement(3656827..3658707) Pseudomonas stutzeri A1501 5096344 YP_001173854.1 CDS dipZ NC_009434.1 3659254 3661017 R two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein complement(3659254..3661017) Pseudomonas stutzeri A1501 5096345 YP_001173855.1 CDS PST_3385 NC_009434.1 3661200 3661700 R Code: R; COG: COG3019; metal-binding protein complement(3661200..3661700) Pseudomonas stutzeri A1501 5096346 YP_001173856.1 CDS PST_3386 NC_009434.1 3661667 3661939 R Code: P; COG: COG2608; copper-binding protein complement(3661667..3661939) Pseudomonas stutzeri A1501 5096347 YP_001173857.1 CDS PST_3387 NC_009434.1 3662013 3664367 R Code: P; COG: COG2217; heavy metal translocating P-type ATPase complement(3662013..3664367) Pseudomonas stutzeri A1501 5096348 YP_001173858.1 CDS PST_3388 NC_009434.1 3664373 3664615 R hypothetical protein complement(3664373..3664615) Pseudomonas stutzeri A1501 5096349 YP_001173859.1 CDS PST_3389 NC_009434.1 3664827 3665009 D hypothetical protein 3664827..3665009 Pseudomonas stutzeri A1501 5096350 YP_001173860.1 CDS PST_3390 NC_009434.1 3665072 3665806 D Code: TK; COG: COG0745; transcriptional activator CopR 3665072..3665806 Pseudomonas stutzeri A1501 5096351 YP_001173861.1 CDS PST_3391 NC_009434.1 3665845 3667182 D Code: T; COG: COG0642; sensor protein CopS 3665845..3667182 Pseudomonas stutzeri A1501 5096352 YP_001173862.1 CDS PST_3392 NC_009434.1 3667449 3667640 R hypothetical protein complement(3667449..3667640) Pseudomonas stutzeri A1501 5096353 YP_001173863.1 CDS PST_3393 NC_009434.1 3667917 3668237 R hypothetical protein complement(3667917..3668237) Pseudomonas stutzeri A1501 5096354 YP_001173864.1 CDS PST_3395 NC_009434.1 3668330 3670033 R hypothetical protein complement(3668330..3670033) Pseudomonas stutzeri A1501 5096355 YP_001173865.1 CDS PST_3394 NC_009434.1 3668435 3670093 D Code: L; COG: COG4584; ISPsy14, transposase 3668435..3670093 Pseudomonas stutzeri A1501 5096356 YP_001173866.1 CDS PST_3396 NC_009434.1 3670080 3670730 D Code: L; COG: COG1484; ISPsy14, transposition helper protein 3670080..3670730 Pseudomonas stutzeri A1501 5096357 YP_001173867.1 CDS PST_3397 NC_009434.1 3671010 3671156 D hypothetical protein 3671010..3671156 Pseudomonas stutzeri A1501 5096358 YP_001173868.1 CDS PST_3398 NC_009434.1 3671292 3671711 R hypothetical protein complement(3671292..3671711) Pseudomonas stutzeri A1501 5096359 YP_001173869.1 CDS PST_3399 NC_009434.1 3671821 3673326 R Code: L; COG: COG3344; group II intron-encoding maturase complement(3671821..3673326) Pseudomonas stutzeri A1501 5096360 YP_001173870.1 CDS PST_3400 NC_009434.1 3673919 3674452 R transposase-like protein TnpA3 complement(3673919..3674452) Pseudomonas stutzeri A1501 5096361 YP_001173871.1 CDS PST_3401 NC_009434.1 3674484 3674855 R hypothetical protein complement(3674484..3674855) Pseudomonas stutzeri A1501 5096362 YP_001173872.1 CDS PST_3403 NC_009434.1 3674845 3675483 R hypothetical protein complement(3674845..3675483) Pseudomonas stutzeri A1501 5096363 YP_001173873.1 CDS PST_3402 NC_009434.1 3675482 3675760 D Code: L; COG: COG2963; ISxac3 transposase 3675482..3675760 Pseudomonas stutzeri A1501 5096364 YP_001173874.1 CDS PST_3404 NC_009434.1 3676542 3678170 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(3676542..3678170) Pseudomonas stutzeri A1501 5096365 YP_001173875.1 CDS PST_3405 NC_009434.1 3678464 3678955 D Code: I; COG: COG1267; phosphatidylglycerophosphatase A 3678464..3678955 Pseudomonas stutzeri A1501 5096366 YP_001173876.1 CDS PST_3406 NC_009434.1 3679180 3681057 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 3679180..3681057 Pseudomonas stutzeri A1501 5096367 YP_001173877.1 CDS PST_3407 NC_009434.1 3681629 3682249 D Code: L; COG: COG0582; phage integrase family site specific recombinase 3681629..3682249 Pseudomonas stutzeri A1501 5096368 YP_001173878.1 CDS PST_3408 NC_009434.1 3682521 3683063 D DMT family permease 3682521..3683063 Pseudomonas stutzeri A1501 5096369 YP_001173879.1 CDS PST_3409 NC_009434.1 3683250 3684764 D Code: L; COG: COG4584; ISPsy14, transposase 3683250..3684764 Pseudomonas stutzeri A1501 5096370 YP_001173880.1 CDS PST_3410 NC_009434.1 3684782 3685537 D Code: L; COG: COG1484; ISPsy14, transposition helper protein 3684782..3685537 Pseudomonas stutzeri A1501 5096371 YP_001173881.1 CDS PST_3411 NC_009434.1 3685580 3686047 D hypothetical protein 3685580..3686047 Pseudomonas stutzeri A1501 5096372 YP_001173882.1 CDS PST_3412 NC_009434.1 3686311 3687555 D HD-superfamily hydrolase 3686311..3687555 Pseudomonas stutzeri A1501 5096373 YP_001173883.1 CDS PST_3413 NC_009434.1 3687596 3688552 R hypothetical protein complement(3687596..3688552) Pseudomonas stutzeri A1501 5096374 YP_001173884.1 CDS PST_3414 NC_009434.1 3688703 3689359 D hypothetical protein 3688703..3689359 Pseudomonas stutzeri A1501 5096375 YP_001173885.1 CDS PST_3415 NC_009434.1 3689415 3690047 D HAD superfamily hydrolase 3689415..3690047 Pseudomonas stutzeri A1501 5096376 YP_001173886.1 CDS PST_3416 NC_009434.1 3690134 3691024 R Code: P; COG: COG1230; Co/Zn/Cd efflux system protein complement(3690134..3691024) Pseudomonas stutzeri A1501 5096377 YP_001173887.1 CDS PST_3417 NC_009434.1 3691117 3691755 D Code: K; COG: COG0789; transcriptional regulator 3691117..3691755 Pseudomonas stutzeri A1501 5096378 YP_001173888.1 CDS PST_3418 NC_009434.1 3692091 3692435 R Code: T; COG: COG0642; sensor kinase complement(3692091..3692435) Pseudomonas stutzeri A1501 5096379 YP_001173889.1 CDS PST_3419 NC_009434.1 3692464 3693492 D Code: L; COG: COG2826; transposase 3692464..3693492 Pseudomonas stutzeri A1501 5096380 YP_001173890.1 CDS PST_3420 NC_009434.1 3693504 3694448 R Code: T; COG: COG0642; heavy metal sensor histidine kinase complement(3693504..3694448) Pseudomonas stutzeri A1501 5096381 YP_001173891.1 CDS czrR-2 NC_009434.1 3694577 3695308 R Code: TK; COG: COG0745; DNA-binding response regulator CzrR complement(3694577..3695308) Pseudomonas stutzeri A1501 5096382 YP_001173892.1 CDS PST_3422 NC_009434.1 3695568 3696887 R outer membrane porin complement(3695568..3696887) Pseudomonas stutzeri A1501 5096383 YP_001173893.1 CDS PST_3423 NC_009434.1 3697189 3698430 D Code: MU; COG: COG1538; cobalt-zinc-cadmium resistance protein CzcC 3697189..3698430 Pseudomonas stutzeri A1501 5096384 YP_001173894.1 CDS PST_3424 NC_009434.1 3698472 3699779 D Code: M; COG: COG0845; CzcB family cobalt/zinc/cadmium efflux transporter membrane fusion protein 3698472..3699779 Pseudomonas stutzeri A1501 5096385 YP_001173895.1 CDS PST_3425 NC_009434.1 3699865 3702963 D cation efflux family protein 3699865..3702963 Pseudomonas stutzeri A1501 5096386 YP_001173896.1 CDS PST_3426 NC_009434.1 3703009 3703104 R hypothetical protein complement(3703009..3703104) Pseudomonas stutzeri A1501 5096387 YP_001173897.1 CDS PST_3427 NC_009434.1 3703191 3703445 R hypothetical protein complement(3703191..3703445) Pseudomonas stutzeri A1501 5096388 YP_001173898.1 CDS PST_3428 NC_009434.1 3703822 3704742 D Code: P; COG: COG1230; cation efflux system protein 3703822..3704742 Pseudomonas stutzeri A1501 5096389 YP_001173899.1 CDS PST_3429 NC_009434.1 3704937 3705974 R putative transposase complement(3704937..3705974) Pseudomonas stutzeri A1501 5096390 YP_001173900.1 CDS PST_3430 NC_009434.1 3706052 3706234 R hypothetical protein complement(3706052..3706234) Pseudomonas stutzeri A1501 5096391 YP_001173901.1 CDS PST_3431 NC_009434.1 3706245 3706643 R Code: K; COG: COG0789; MerR family transcriptional regulator complement(3706245..3706643) Pseudomonas stutzeri A1501 5096392 YP_001173902.1 CDS PST_3432 NC_009434.1 3706718 3707068 D mercuric transport protein 3706718..3707068 Pseudomonas stutzeri A1501 5096393 YP_001173903.1 CDS PST_3433 NC_009434.1 3707081 3707356 D periplasmic transport protein; MerP 3707081..3707356 Pseudomonas stutzeri A1501 5096394 YP_001173904.1 CDS PST_3434 NC_009434.1 3707364 3707576 D hypothetical protein 3707364..3707576 Pseudomonas stutzeri A1501 5096395 YP_001173905.1 CDS PST_3435 NC_009434.1 3707589 3710582 R Tn3 family transposase complement(3707589..3710582) Pseudomonas stutzeri A1501 5096396 YP_001173906.1 CDS PST_3436 NC_009434.1 3710586 3710996 R Code: R; COG: COG1569; hypothetical protein complement(3710586..3710996) Pseudomonas stutzeri A1501 5096397 YP_001173907.1 CDS PST_3437 NC_009434.1 3710996 3711235 R hypothetical protein complement(3710996..3711235) Pseudomonas stutzeri A1501 5096398 YP_001173908.1 CDS PST_3438 NC_009434.1 3711428 3712321 R hypothetical protein complement(3711428..3712321) Pseudomonas stutzeri A1501 5096399 YP_001173909.1 CDS PST_3439 NC_009434.1 3712353 3712517 D hypothetical protein 3712353..3712517 Pseudomonas stutzeri A1501 5096400 YP_001173910.1 CDS PST_3440 NC_009434.1 3712833 3714920 R Code: L; COG: COG0210; putative DNA helicase complement(3712833..3714920) Pseudomonas stutzeri A1501 5096401 YP_001173911.1 CDS PST_3441 NC_009434.1 3714917 3721249 R putative helicase complement(3714917..3721249) Pseudomonas stutzeri A1501 5096402 YP_001173912.1 CDS PST_3442 NC_009434.1 3721252 3722925 R hypothetical protein complement(3721252..3722925) Pseudomonas stutzeri A1501 5096403 YP_001173913.1 CDS PST_3443 NC_009434.1 3722990 3723664 R hypothetical protein complement(3722990..3723664) Pseudomonas stutzeri A1501 5096404 YP_001173914.1 CDS PST_3444 NC_009434.1 3723765 3724586 R hypothetical protein complement(3723765..3724586) Pseudomonas stutzeri A1501 5096405 YP_001173915.1 CDS PST_3445 NC_009434.1 3724586 3726493 R hypothetical protein complement(3724586..3726493) Pseudomonas stutzeri A1501 5096406 YP_001173916.1 CDS PST_3446 NC_009434.1 3726468 3728576 R hypothetical protein complement(3726468..3728576) Pseudomonas stutzeri A1501 5096407 YP_001173917.1 CDS PST_3447 NC_009434.1 3728588 3733495 R Code: V; COG: COG1002; type II restriction enzyme, methylase subunit complement(3728588..3733495) Pseudomonas stutzeri A1501 5096408 YP_001173918.1 CDS PST_3448 NC_009434.1 3733509 3736382 R Code: KL; COG: COG0553; SNF2 family DNA/RNA helicase complement(3733509..3736382) Pseudomonas stutzeri A1501 5096409 YP_001173919.1 CDS PST_3449 NC_009434.1 3736610 3737050 R hypothetical protein complement(3736610..3737050) Pseudomonas stutzeri A1501 5096410 YP_001173920.1 CDS PST_3450 NC_009434.1 3737112 3737399 R hypothetical protein complement(3737112..3737399) Pseudomonas stutzeri A1501 5096411 YP_001173921.1 CDS PST_3451 NC_009434.1 3737638 3738405 D Code: K; COG: COG2378; hypothetical protein 3737638..3738405 Pseudomonas stutzeri A1501 5096412 YP_001173922.1 CDS PST_3452 NC_009434.1 3738471 3738779 D hypothetical protein 3738471..3738779 Pseudomonas stutzeri A1501 5096413 YP_001173923.1 CDS PST_3453 NC_009434.1 3738976 3739362 D hypothetical protein 3738976..3739362 Pseudomonas stutzeri A1501 5096414 YP_001173924.1 CDS PST_3454 NC_009434.1 3739371 3740018 D hypothetical protein 3739371..3740018 Pseudomonas stutzeri A1501 5096415 YP_001173925.1 CDS PST_3455 NC_009434.1 3740101 3742281 D Code: O; COG: COG0464; ATPase 3740101..3742281 Pseudomonas stutzeri A1501 5096416 YP_001173926.1 CDS PST_3456 NC_009434.1 3742353 3742724 D hypothetical protein 3742353..3742724 Pseudomonas stutzeri A1501 5096417 YP_001173927.1 CDS PST_3457 NC_009434.1 3742770 3743786 D transcriptional factor MdcH 3742770..3743786 Pseudomonas stutzeri A1501 5096418 YP_001173928.1 CDS PST_3458 NC_009434.1 3743743 3743940 R hypothetical protein complement(3743743..3743940) Pseudomonas stutzeri A1501 5096419 YP_001173929.1 CDS PST_3459 NC_009434.1 3744350 3744862 R hypothetical protein complement(3744350..3744862) Pseudomonas stutzeri A1501 5096420 YP_001173930.1 CDS PST_3460 NC_009434.1 3744859 3745188 R SohA; PrlF; involved in protein secretion; when overproduced or mutated, it induces growth defect and increased export of a reporter protein; a PrlF mutation induces the activity of the Lon protease, and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation; putative regulator PrlF complement(3744859..3745188) Pseudomonas stutzeri A1501 5096421 YP_001173931.1 CDS PST_3461 NC_009434.1 3745515 3747734 R Code: R; COG: COG1201; ATP-dependent helicase complement(3745515..3747734) Pseudomonas stutzeri A1501 5096422 YP_001173932.1 CDS PST_3462 NC_009434.1 3747709 3748875 R biotin carboxylase complement(3747709..3748875) Pseudomonas stutzeri A1501 5096423 YP_001173933.1 CDS PST_3463 NC_009434.1 3749001 3751484 R hypothetical protein complement(3749001..3751484) Pseudomonas stutzeri A1501 5096424 YP_001173934.1 CDS PST_3464 NC_009434.1 3751694 3752347 R Code: R; COG: COG5018; exonuclease complement(3751694..3752347) Pseudomonas stutzeri A1501 5096425 YP_001173935.1 CDS PST_3465 NC_009434.1 3753184 3753588 R hypothetical protein complement(3753184..3753588) Pseudomonas stutzeri A1501 5096426 YP_001173936.1 CDS PST_3466 NC_009434.1 3753725 3753889 R hypothetical protein complement(3753725..3753889) Pseudomonas stutzeri A1501 5096427 YP_001173937.1 CDS PST_3467 NC_009434.1 3753958 3754107 D hypothetical protein 3753958..3754107 Pseudomonas stutzeri A1501 5096428 YP_001173938.1 CDS PST_3468 NC_009434.1 3754578 3754760 D hypothetical protein 3754578..3754760 Pseudomonas stutzeri A1501 5096429 YP_001173939.1 CDS PST_3469 NC_009434.1 3754857 3755234 D hypothetical protein 3754857..3755234 Pseudomonas stutzeri A1501 5096430 YP_001173940.1 CDS PST_3470 NC_009434.1 3755260 3755529 R hypothetical protein complement(3755260..3755529) Pseudomonas stutzeri A1501 5096431 YP_001173941.1 CDS PST_3471 NC_009434.1 3755519 3757057 R Code: L; COG: COG3436; ISPpu14, transposase Orf3 complement(3755519..3757057) Pseudomonas stutzeri A1501 5096432 YP_001173942.1 CDS PST_3472 NC_009434.1 3757179 3757523 R Code: L; COG: COG3436; ISPsy5, Orf1 complement(3757179..3757523) Pseudomonas stutzeri A1501 5096433 YP_001173943.1 CDS PST_3473 NC_009434.1 3757520 3757810 R hypothetical protein complement(3757520..3757810) Pseudomonas stutzeri A1501 5096434 YP_001173944.1 CDS PST_3474 NC_009434.1 3758343 3758516 R hypothetical protein complement(3758343..3758516) Pseudomonas stutzeri A1501 5096435 YP_001173945.1 CDS PST_3475 NC_009434.1 3758744 3759199 R Code: LR; COG: COG0494; NTP pyrophosphohydrolase complement(3758744..3759199) Pseudomonas stutzeri A1501 5096436 YP_001173946.1 CDS PST_3476 NC_009434.1 3759445 3760059 D Code: E; COG: COG1280; amino acid transporter LysE 3759445..3760059 Pseudomonas stutzeri A1501 5096437 YP_001173947.1 CDS PST_3477 NC_009434.1 3760169 3762457 D hypothetical protein 3760169..3762457 Pseudomonas stutzeri A1501 5096438 YP_001173948.1 CDS malK-2 NC_009434.1 3762533 3763648 R with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein complement(3762533..3763648) Pseudomonas stutzeri A1501 5096439 YP_001173949.1 CDS PST_3479 NC_009434.1 3763725 3765416 R Code: G; COG: COG0366; oligo-1,6-glucosidase complement(3763725..3765416) Pseudomonas stutzeri A1501 5096440 YP_001173950.1 CDS PST_3480 NC_009434.1 3765501 3766049 R Code: R; COG: COG0110; acetyltransferase complement(3765501..3766049) Pseudomonas stutzeri A1501 5096441 YP_001173951.1 CDS PST_3481 NC_009434.1 3766235 3766837 D Code: O; COG: COG0625; glutathione S-transferase family protein 3766235..3766837 Pseudomonas stutzeri A1501 5096442 YP_001173952.1 CDS PST_3482 NC_009434.1 3766885 3767313 R hypothetical protein complement(3766885..3767313) Pseudomonas stutzeri A1501 5096443 YP_001173953.1 CDS PST_3483 NC_009434.1 3767450 3770248 R Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT complement(3767450..3770248) Pseudomonas stutzeri A1501 5096444 YP_001173954.1 CDS malG NC_009434.1 3770291 3771181 R with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease complement(3770291..3771181) Pseudomonas stutzeri A1501 5096445 YP_001173955.1 CDS malF NC_009434.1 3771192 3772850 R with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein complement(3771192..3772850) Pseudomonas stutzeri A1501 5096446 YP_001173956.1 CDS malE NC_009434.1 3772825 3774186 R functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter periplasmic protein complement(3772825..3774186) Pseudomonas stutzeri A1501 5096447 YP_001173957.1 CDS malS NC_009434.1 3774264 3776336 D periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; periplasmic alpha-amylase 3774264..3776336 Pseudomonas stutzeri A1501 5096448 YP_001173958.1 CDS PST_3488 NC_009434.1 3776333 3777445 D hypothetical protein 3776333..3777445 Pseudomonas stutzeri A1501 5096449 YP_001173959.1 CDS PST_3489 NC_009434.1 3777628 3779469 R glucan 1,4-alpha-maltohexaosidase complement(3777628..3779469) Pseudomonas stutzeri A1501 5096450 YP_001173960.1 CDS lamB NC_009434.1 3779566 3780969 D porin involved in the transport of maltose and maltodextrins; maltoporin 3779566..3780969 Pseudomonas stutzeri A1501 5096451 YP_001173961.1 CDS PST_3491 NC_009434.1 3780920 3782209 D hypothetical protein 3780920..3782209 Pseudomonas stutzeri A1501 5096452 YP_001173962.1 CDS sugE NC_009434.1 3782121 3782525 R Code: P; COG: COG2076; SugE protein complement(3782121..3782525) Pseudomonas stutzeri A1501 5096453 YP_001173963.1 CDS PST_3493 NC_009434.1 3782713 3783576 R Code: R; COG: COG4989; oxidoreductase complement(3782713..3783576) Pseudomonas stutzeri A1501 5096454 YP_001173964.1 CDS PST_3494 NC_009434.1 3783589 3785217 R Code: C; COG: COG1012; glyceraldehyde-3-phosphate dehydrogenase complement(3783589..3785217) Pseudomonas stutzeri A1501 5096455 YP_001173965.1 CDS eda-1 NC_009434.1 3785286 3786023 R catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase complement(3785286..3786023) Pseudomonas stutzeri A1501 5096456 YP_001173966.1 CDS PST_3496 NC_009434.1 3786042 3786755 R Code: G; COG: COG0363; 6-phosphogluconolactonase complement(3786042..3786755) Pseudomonas stutzeri A1501 5096457 YP_001173967.1 CDS PST_3497 NC_009434.1 3786742 3788211 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(3786742..3788211) Pseudomonas stutzeri A1501 5096458 YP_001173968.1 CDS hexR NC_009434.1 3788454 3789251 D Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 3788454..3789251 Pseudomonas stutzeri A1501 5096459 YP_001173969.1 CDS glk NC_009434.1 3789375 3790343 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(3789375..3790343) Pseudomonas stutzeri A1501 5096460 YP_001173970.1 CDS PST_3500 NC_009434.1 3790340 3792166 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(3790340..3792166) Pseudomonas stutzeri A1501 5096461 YP_001173971.1 CDS PST_3501 NC_009434.1 3792264 3792665 R hypothetical protein complement(3792264..3792665) Pseudomonas stutzeri A1501 5096462 YP_001173972.1 CDS PST_3502 NC_009434.1 3792737 3794164 R Code: GEPR; COG: COG0477; EmrB/QacA family drug resistance transporter complement(3792737..3794164) Pseudomonas stutzeri A1501 5096463 YP_001173973.1 CDS PST_3503 NC_009434.1 3794501 3795034 D Code: P; COG: COG3470; hypothetical protein 3794501..3795034 Pseudomonas stutzeri A1501 5096464 YP_001173974.1 CDS PST_3504 NC_009434.1 3795034 3795372 D periplasmic lipoprotein involved in iron transport 3795034..3795372 Pseudomonas stutzeri A1501 5096465 YP_001173975.1 CDS PST_3505 NC_009434.1 3795392 3796249 D Code: P; COG: COG0672; FTR1 family iron permease 3795392..3796249 Pseudomonas stutzeri A1501 5096466 YP_001173976.1 CDS PST_3506 NC_009434.1 3796246 3797619 D Code: C; COG: COG0348; polyferredoxin 3796246..3797619 Pseudomonas stutzeri A1501 5096467 YP_001173977.1 CDS PST_3507 NC_009434.1 3797717 3798340 R Code: O; COG: COG1180; radical SAM protein complement(3797717..3798340) Pseudomonas stutzeri A1501 5096468 YP_001173978.1 CDS PST_3508 NC_009434.1 3798409 3798564 R oxygen-sensitive ribonucleoside-triphosphate reductase complement(3798409..3798564) Pseudomonas stutzeri A1501 5096469 YP_001173979.1 CDS PST_3509 NC_009434.1 3798637 3800655 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(3798637..3800655) Pseudomonas stutzeri A1501 5096470 YP_001173980.1 CDS dnrS NC_009434.1 3800887 3801564 D Code: T; COG: COG0664; transcriptional regulator DnrS 3800887..3801564 Pseudomonas stutzeri A1501 5096471 YP_001173981.1 CDS PST_3511 NC_009434.1 3801613 3801996 D Code: S; COG: COG4273; hypothetical protein 3801613..3801996 Pseudomonas stutzeri A1501 5096472 YP_001173982.1 CDS PST_3512 NC_009434.1 3802624 3803514 R Code: O; COG: COG0826; collagenase complement(3802624..3803514) Pseudomonas stutzeri A1501 5096473 YP_001173983.1 CDS PST_3513 NC_009434.1 3803529 3804524 R Code: O; COG: COG0826; protease complement(3803529..3804524) Pseudomonas stutzeri A1501 5096474 YP_001173984.1 CDS PST_3514 NC_009434.1 3804728 3804937 R terminase small subunit complement(3804728..3804937) Pseudomonas stutzeri A1501 5096475 YP_001173985.1 CDS norR NC_009434.1 3805011 3806567 R Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator complement(3805011..3806567) Pseudomonas stutzeri A1501 5096476 YP_001173986.1 CDS dnrN NC_009434.1 3806536 3807399 D Code: D; COG: COG2846; regulator of cell morphogenesis and NO signaling 3806536..3807399 Pseudomonas stutzeri A1501 5096477 YP_001173987.1 CDS dnrO NC_009434.1 3807396 3807914 D DnrO protein 3807396..3807914 Pseudomonas stutzeri A1501 5096478 YP_001173988.1 CDS dnrD NC_009434.1 3808049 3808732 D Code: T; COG: COG0664; transcription factor for denitrification gene expression elicited by NO 3808049..3808732 Pseudomonas stutzeri A1501 5096479 YP_001173989.1 CDS dnrP NC_009434.1 3808734 3808991 D DnrP protein 3808734..3808991 Pseudomonas stutzeri A1501 5096480 YP_001173990.1 CDS norD NC_009434.1 3809250 3811091 R Code: P; COG: COG4548; nitric oxide reductase activation protein complement(3809250..3811091) Pseudomonas stutzeri A1501 5096481 YP_001173991.1 CDS norB NC_009434.1 3811175 3812599 R Code: P; COG: COG3256; nitric-oxide reductase subunit B complement(3811175..3812599) Pseudomonas stutzeri A1501 5096482 YP_001173992.1 CDS norC NC_009434.1 3812643 3813083 R Code: C; COG: COG2010; nitric-oxide reductase subunit C complement(3812643..3813083) Pseudomonas stutzeri A1501 5096483 YP_001173993.1 CDS nirH NC_009434.1 3813338 3813844 R Code: K; COG: COG1522; nitrite reductase heme biosynthesis H protein complement(3813338..3813844) Pseudomonas stutzeri A1501 5096484 YP_001173994.1 CDS nirG NC_009434.1 3813819 3814262 R Code: K; COG: COG1522; putative heme biosynthesis protein complement(3813819..3814262) Pseudomonas stutzeri A1501 5096485 YP_001173995.1 CDS nirL NC_009434.1 3814255 3814767 R Code: K; COG: COG1522; heme d1 biosynthesis protein NirL complement(3814255..3814767) Pseudomonas stutzeri A1501 5096486 YP_001173996.1 CDS nirD NC_009434.1 3814764 3815222 R Code: K; COG: COG1522; transcriptional regulator complement(3814764..3815222) Pseudomonas stutzeri A1501 5096487 YP_001173997.1 CDS nirF NC_009434.1 3815224 3816399 R heme d1 biosynthesis protein NirF complement(3815224..3816399) Pseudomonas stutzeri A1501 5096488 YP_001173998.1 CDS nirC NC_009434.1 3816396 3816737 R Code: C; COG: COG2010; c-type cytochrome complement(3816396..3816737) Pseudomonas stutzeri A1501 5096489 YP_001173999.1 CDS nirM NC_009434.1 3816756 3817070 R Code: C; COG: COG4654; cytochrome c-551 complement(3816756..3817070) Pseudomonas stutzeri A1501 5096490 YP_001174000.1 CDS nirB NC_009434.1 3817391 3818203 R denitrification system component cytochrome c-552 complement(3817391..3818203) Pseudomonas stutzeri A1501 5096491 YP_001174001.1 CDS nirT NC_009434.1 3818314 3818922 R Code: C; COG: COG3005; tetraheme protein NirT complement(3818314..3818922) Pseudomonas stutzeri A1501 5096492 YP_001174002.1 CDS nirS NC_009434.1 3818992 3820674 R cytochrome cd1 nitrite reductase complement(3818992..3820674) Pseudomonas stutzeri A1501 5096493 YP_001174003.1 CDS nirQ NC_009434.1 3821123 3821830 D Code: R; COG: COG0714; denitrification regulatory protein nirQ 3821123..3821830 Pseudomonas stutzeri A1501 5096494 YP_001174004.1 CDS nirO NC_009434.1 3821874 3822401 D Code: C; COG: COG1845; cytochrome c oxidase subunit III family protein 3821874..3822401 Pseudomonas stutzeri A1501 5096495 YP_001174005.1 CDS nirP NC_009434.1 3822412 3822660 D membrane protein NirP 3822412..3822660 Pseudomonas stutzeri A1501 5096496 YP_001174006.1 CDS nirJ NC_009434.1 3822819 3824000 D Code: R; COG: COG0535; heme d1 biosynthesis protein NirJ 3822819..3824000 Pseudomonas stutzeri A1501 5096497 YP_001174007.1 CDS nirE NC_009434.1 3824062 3824898 D Code: H; COG: COG0007; uroporphyrinogen-III C-methyltransferase 3824062..3824898 Pseudomonas stutzeri A1501 5096498 YP_001174008.1 CDS nirN NC_009434.1 3824889 3826397 D c-type cytochrome 3824889..3826397 Pseudomonas stutzeri A1501 5096499 YP_001174009.1 CDS nirY NC_009434.1 3826634 3827353 D Code: K; COG: COG0583; LysR family transcriptional regulator 3826634..3827353 Pseudomonas stutzeri A1501 5096500 YP_001174010.1 CDS PST_3540 NC_009434.1 3827396 3828433 R Code: T; COG: COG3448; hypothetical protein complement(3827396..3828433) Pseudomonas stutzeri A1501 5096501 YP_001174011.1 CDS PST_3541 NC_009434.1 3828631 3829035 R hypothetical protein complement(3828631..3829035) Pseudomonas stutzeri A1501 5096502 YP_001174012.1 CDS PST_3542 NC_009434.1 3829306 3830400 R Code: NT; COG: COG0840; methyl-accepting chemotaxis protein complement(3829306..3830400) Pseudomonas stutzeri A1501 5096503 YP_001174013.1 CDS PST_3543 NC_009434.1 3830413 3831156 R Code: IQR; COG: COG1028; short-chain dehydrogenase/reductase complement(3830413..3831156) Pseudomonas stutzeri A1501 5096504 YP_001174014.1 CDS PST_3544 NC_009434.1 3831275 3832465 R Code: P; COG: COG3213; hypothetical protein complement(3831275..3832465) Pseudomonas stutzeri A1501 5096505 YP_001174015.1 CDS tatA-1 NC_009434.1 3832780 3832977 R sec-independent protein translocase protein TatA complement(3832780..3832977) Pseudomonas stutzeri A1501 5096506 YP_001174016.1 CDS nosL NC_009434.1 3833010 3833582 R Code: C; COG: COG4314; lipoprotein involved in nitrous oxide reduction complement(3833010..3833582) Pseudomonas stutzeri A1501 5096507 YP_001174017.1 CDS nosY NC_009434.1 3833608 3834438 R Code: R; COG: COG1277; ABC transporter involved in multi-copper enzyme maturation complement(3833608..3834438) Pseudomonas stutzeri A1501 5096508 YP_001174018.1 CDS nosF NC_009434.1 3834435 3835361 R Code: V; COG: COG1131; multidrug ABC transporter ATPase complement(3834435..3835361) Pseudomonas stutzeri A1501 5096509 YP_001174019.1 CDS nosD NC_009434.1 3835358 3836548 R Code: P; COG: COG3420; nitrous oxidase accessory protein complement(3835358..3836548) Pseudomonas stutzeri A1501 5096510 YP_001174020.1 CDS nosZ NC_009434.1 3836779 3838692 R reduces nitrous oxide to nitrogen; nitrous-oxide reductase complement(3836779..3838692) Pseudomonas stutzeri A1501 5096511 YP_001174021.1 CDS nosR NC_009434.1 3838760 3840937 R Code: K; COG: COG3901; regulatory protein NosR complement(3838760..3840937) Pseudomonas stutzeri A1501 5096512 YP_001174022.1 CDS PST_3552 NC_009434.1 3841198 3842448 R Code: I; COG: COG1960; acyl-CoA dehydrogenase complement(3841198..3842448) Pseudomonas stutzeri A1501 5096513 YP_001174023.1 CDS PST_3553 NC_009434.1 3842632 3843072 R Code: S; COG: COG3399; hypothetical protein complement(3842632..3843072) Pseudomonas stutzeri A1501 5096514 YP_001174024.1 CDS PST_3554 NC_009434.1 3843143 3843496 R hypothetical protein complement(3843143..3843496) Pseudomonas stutzeri A1501 5096515 YP_001174025.1 CDS PST_3555 NC_009434.1 3843707 3844126 D Code: S; COG: COG3189; putative bacteriophage protein 3843707..3844126 Pseudomonas stutzeri A1501 5096516 YP_001174026.1 CDS PST_3556 NC_009434.1 3844110 3845108 R Code: G; COG: COG1638; c4-dicarboxylate-binding protein complement(3844110..3845108) Pseudomonas stutzeri A1501 5096517 YP_001174027.1 CDS PST_3558 NC_009434.1 3845474 3846697 R Code: G; COG: COG1638; c4-dicarboxylate-binding protein complement(3845474..3846697) Pseudomonas stutzeri A1501 5096518 YP_001174028.1 CDS PST_3557 NC_009434.1 3846544 3847827 D Code: O; COG: COG0492; thioredoxin reductase 3846544..3847827 Pseudomonas stutzeri A1501 5096519 YP_001174029.1 CDS sda-2 NC_009434.1 3847877 3849253 D Code: E; COG: COG1760; iron-sulfur-dependent L-serine dehydratase 3847877..3849253 Pseudomonas stutzeri A1501 5096520 YP_001174030.1 CDS PST_3560 NC_009434.1 3849296 3853576 D two-component hybrid sensor and regulator 3849296..3853576 Pseudomonas stutzeri A1501 5096521 YP_001174031.1 CDS phhR NC_009434.1 3853663 3855222 R Code: KE; COG: COG3283; transcriptional regulator PhhR complement(3853663..3855222) Pseudomonas stutzeri A1501 5096522 YP_001174032.1 CDS phhA NC_009434.1 3855468 3856253 D phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 3855468..3856253 Pseudomonas stutzeri A1501 5096523 YP_001174033.1 CDS phhB NC_009434.1 3856393 3856749 D 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 3856393..3856749 Pseudomonas stutzeri A1501 5096524 YP_001174034.1 CDS phhC NC_009434.1 3856749 3857945 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 3856749..3857945 Pseudomonas stutzeri A1501 5096525 YP_001174035.1 CDS PST_3565 NC_009434.1 3857967 3858908 D mitomycin antibiotics/polyketide fumonisin biosynthesis protein 3857967..3858908 Pseudomonas stutzeri A1501 5096526 YP_001174036.1 CDS cynS NC_009434.1 3858993 3859442 D catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 3858993..3859442 Pseudomonas stutzeri A1501 5096527 YP_001174037.1 CDS PST_3567 NC_009434.1 3859447 3860001 R Code: R; COG: COG0666; ankyrin domain-containing protein complement(3859447..3860001) Pseudomonas stutzeri A1501 5096528 YP_001174038.1 CDS katB NC_009434.1 3860113 3861651 R Code: P; COG: COG0753; catalase complement(3860113..3861651) Pseudomonas stutzeri A1501 5096529 YP_001174039.1 CDS codB NC_009434.1 3861943 3863220 D Code: F; COG: COG1457; cytosine permease 3861943..3863220 Pseudomonas stutzeri A1501 5096530 YP_001174040.1 CDS codA NC_009434.1 3863234 3864469 D Code: FR; COG: COG0402; cytosine deaminase 3863234..3864469 Pseudomonas stutzeri A1501 5096531 YP_001174041.1 CDS PST_3571 NC_009434.1 3864463 3865062 R Code: C; COG: COG2863; cytochrome c4 complement(3864463..3865062) Pseudomonas stutzeri A1501 5096532 YP_001174042.1 CDS PST_3572 NC_009434.1 3865325 3865468 R hypothetical protein complement(3865325..3865468) Pseudomonas stutzeri A1501 5096533 YP_001174043.1 CDS PST_3573 NC_009434.1 3865514 3865990 D Code: I; COG: COG1607; cytosolic long-chain acyl-CoA thioester hydrolase family protein 3865514..3865990 Pseudomonas stutzeri A1501 5096534 YP_001174044.1 CDS phnA NC_009434.1 3866104 3866448 D Code: P; COG: COG2824; phnA protein 3866104..3866448 Pseudomonas stutzeri A1501 5096535 YP_001174045.1 CDS PST_3575 NC_009434.1 3866496 3867203 R Code: S; COG: COG3326; cold-shock DNA-binding domain-containing protein complement(3866496..3867203) Pseudomonas stutzeri A1501 5096536 YP_001174046.1 CDS PST_3576 NC_009434.1 3867438 3868169 D Code: S; COG: COG1432; hypothetical protein 3867438..3868169 Pseudomonas stutzeri A1501 5096537 YP_001174047.1 CDS PST_3577 NC_009434.1 3868176 3869576 R diguanylate cyclase complement(3868176..3869576) Pseudomonas stutzeri A1501 5096538 YP_001174048.1 CDS PST_3578 NC_009434.1 3869782 3870180 D hypothetical protein 3869782..3870180 Pseudomonas stutzeri A1501 5096539 YP_001174049.1 CDS PST_3579 NC_009434.1 3870193 3871119 R Code: R; COG: COG1079; ABC transporter permease complement(3870193..3871119) Pseudomonas stutzeri A1501 5096540 YP_001174050.1 CDS PST_3580 NC_009434.1 3871119 3872255 R Code: R; COG: COG4603; ABC transporter permease complement(3871119..3872255) Pseudomonas stutzeri A1501 5096541 YP_001174051.1 CDS PST_3581 NC_009434.1 3872248 3873825 R ABC transporter ATP-binding protein complement(3872248..3873825) Pseudomonas stutzeri A1501 5096542 YP_001174052.1 CDS PST_3583 NC_009434.1 3873822 3875411 R Code: R; COG: COG1744; bmp family protein complement(3873822..3875411) Pseudomonas stutzeri A1501 5096543 YP_001174053.1 CDS PST_3582 NC_009434.1 3874946 3875332 R hypothetical protein complement(3874946..3875332) Pseudomonas stutzeri A1501 5096544 YP_001174054.1 CDS PST_3584 NC_009434.1 3875329 3876339 R Code: R; COG: COG3491; 2OG-Fe(II) oxygenase complement(3875329..3876339) Pseudomonas stutzeri A1501 5096545 YP_001174055.1 CDS PST_3585 NC_009434.1 3876563 3876721 R hypothetical protein complement(3876563..3876721) Pseudomonas stutzeri A1501 5096546 YP_001174056.1 CDS PST_3586 NC_009434.1 3876902 3877372 D Code: S; COG: COG4244; hypothetical protein 3876902..3877372 Pseudomonas stutzeri A1501 5096547 YP_001174057.1 CDS PST_3587 NC_009434.1 3877369 3878664 D Code: G; COG: COG2133; L-sorbosone dehydrogenase 3877369..3878664 Pseudomonas stutzeri A1501 5096548 YP_001174058.1 CDS PST_3588 NC_009434.1 3878717 3879121 R hypothetical protein complement(3878717..3879121) Pseudomonas stutzeri A1501 5096549 YP_001174059.1 CDS PST_3589 NC_009434.1 3879292 3879684 D Code: E; COG: COG0346; glyoxylase I family protein 3879292..3879684 Pseudomonas stutzeri A1501 5096550 YP_001174060.1 CDS PST_3590 NC_009434.1 3879840 3880310 R hypothetical protein complement(3879840..3880310) Pseudomonas stutzeri A1501 5096551 YP_001174061.1 CDS PST_3591 NC_009434.1 3880314 3880772 R Code: S; COG: COG2128; hypothetical protein complement(3880314..3880772) Pseudomonas stutzeri A1501 5096552 YP_001174062.1 CDS PST_3592 NC_009434.1 3880774 3881673 D Code: K; COG: COG2207; AraC family transcriptional regulator 3880774..3881673 Pseudomonas stutzeri A1501 5096553 YP_001174063.1 CDS PST_3593 NC_009434.1 3881710 3882822 D Code: K; COG: COG4977; transcriptional regulator 3881710..3882822 Pseudomonas stutzeri A1501 5096554 YP_001174064.1 CDS PST_3594 NC_009434.1 3882909 3884090 D Code: GEPR; COG: COG0477; MFS family transporter 3882909..3884090 Pseudomonas stutzeri A1501 5096555 YP_001174065.1 CDS PST_3595 NC_009434.1 3884113 3884487 R hypothetical protein complement(3884113..3884487) Pseudomonas stutzeri A1501 5096556 YP_001174066.1 CDS PST_3596 NC_009434.1 3884594 3885304 R Code: K; COG: COG1309; TetR family transcriptional regulator complement(3884594..3885304) Pseudomonas stutzeri A1501 5096557 YP_001174067.1 CDS PST_3597 NC_009434.1 3885598 3886680 D Code: C; COG: COG2141; luciferase family protein 3885598..3886680 Pseudomonas stutzeri A1501 5096558 YP_001174068.1 CDS PST_3598 NC_009434.1 3886680 3887426 D Code: Q; COG: COG1335; isochorismatase family protein 3886680..3887426 Pseudomonas stutzeri A1501 5096559 YP_001174069.1 CDS PST_3599 NC_009434.1 3887436 3887891 D Code: J; COG: COG0251; endoribonuclease L-PSP family protein 3887436..3887891 Pseudomonas stutzeri A1501 5096560 YP_001174070.1 CDS PST_3600 NC_009434.1 3887957 3888754 D Code: R; COG: COG0596; alpha/beta fold family hydrolase 3887957..3888754 Pseudomonas stutzeri A1501 5096561 YP_001174071.1 CDS PST_3601 NC_009434.1 3888765 3889355 D Code: C; COG: COG0778; hypothetical protein 3888765..3889355 Pseudomonas stutzeri A1501 5096562 YP_001174072.1 CDS PST_3602 NC_009434.1 3889369 3889893 D Code: R; COG: COG1853; NAD(P)H-flavin oxidoreductase 3889369..3889893 Pseudomonas stutzeri A1501 5096563 YP_001174073.1 CDS PST_3603 NC_009434.1 3890254 3890616 D Code: T; COG: COG1734; DnaK suppressor protein, putative 3890254..3890616 Pseudomonas stutzeri A1501 5096564 YP_001174074.1 CDS PST_3604 NC_009434.1 3890626 3891828 D Code: R; COG: COG0523; CobW/P47K family protein 3890626..3891828 Pseudomonas stutzeri A1501 5096565 YP_001174075.1 CDS PST_3605 NC_009434.1 3891828 3892472 D hypothetical protein 3891828..3892472 Pseudomonas stutzeri A1501 5096566 YP_001174076.1 CDS PST_3606 NC_009434.1 3892522 3892851 R Code: C; COG: COG1145; ferredoxin complement(3892522..3892851) Pseudomonas stutzeri A1501 5096567 YP_001174077.1 CDS PST_3607 NC_009434.1 3893060 3893647 D Code: S; COG: COG1739; hypothetical protein 3893060..3893647 Pseudomonas stutzeri A1501 5096568 YP_001174078.1 CDS add NC_009434.1 3894106 3895056 D catalyzes the formation of inosine from adenosine; adenosine deaminase 3894106..3895056 Pseudomonas stutzeri A1501 5096569 YP_001174079.1 CDS PST_3609 NC_009434.1 3895157 3895321 D hypothetical protein 3895157..3895321 Pseudomonas stutzeri A1501 5096570 YP_001174080.1 CDS PST_3610 NC_009434.1 3895324 3896598 R Code: GEPR; COG: COG0477; MFS family transporter complement(3895324..3896598) Pseudomonas stutzeri A1501 5096571 YP_001174081.1 CDS PST_3611 NC_009434.1 3896698 3897345 D Code: K; COG: COG1309; transcriptional regulator 3896698..3897345 Pseudomonas stutzeri A1501 5096572 YP_001174082.1 CDS PST_3612 NC_009434.1 3897358 3897549 R Code: P; COG: COG2608; copper-binding protein complement(3897358..3897549) Pseudomonas stutzeri A1501 5096573 YP_001174083.1 CDS PST_3613 NC_009434.1 3897698 3900076 D Code: P; COG: COG2217; metal transporting P-type ATPase 3897698..3900076 Pseudomonas stutzeri A1501 5096574 YP_001174084.1 CDS PST_3614 NC_009434.1 3900090 3900539 D Code: K; COG: COG0789; transcriptional regulator 3900090..3900539 Pseudomonas stutzeri A1501 5096575 YP_001174085.1 CDS PST_3615 NC_009434.1 3900644 3902638 D Code: NT; COG: COG0840; methyl-accepting chemotaxis transducer 3900644..3902638 Pseudomonas stutzeri A1501 5096576 YP_001174086.1 CDS bfrA NC_009434.1 3902693 3903205 R Code: P; COG: COG2193; bacterioferritin complement(3902693..3903205) Pseudomonas stutzeri A1501 5096577 YP_001174087.1 CDS PST_3617 NC_009434.1 3903406 3904485 D membrane-fusion protein 3903406..3904485 Pseudomonas stutzeri A1501 5096578 YP_001174088.1 CDS PST_3618 NC_009434.1 3904490 3907534 D Code: V; COG: COG0841; RND efflux transporter 3904490..3907534 Pseudomonas stutzeri A1501 5096579 YP_001174089.1 CDS PST_3619 NC_009434.1 3907531 3908997 D Code: MU; COG: COG1538; outer membrane lipoprotein 3907531..3908997 Pseudomonas stutzeri A1501 5096580 YP_001174090.1 CDS PST_3620 NC_009434.1 3909074 3910078 R Code: TD; COG: COG1718; serine kinase complement(3909074..3910078) Pseudomonas stutzeri A1501 5096581 YP_001174091.1 CDS PST_3621 NC_009434.1 3910122 3911162 D AraC family transcriptional regulator 3910122..3911162 Pseudomonas stutzeri A1501 5096582 YP_001174092.1 CDS PST_3622 NC_009434.1 3911184 3911456 D hypothetical protein 3911184..3911456 Pseudomonas stutzeri A1501 5096583 YP_001174093.1 CDS PST_3623 NC_009434.1 3911545 3912285 D Code: L; COG: COG0084; TatD family deoxyribonuclease 3911545..3912285 Pseudomonas stutzeri A1501 5096584 YP_001174094.1 CDS PST_3624 NC_009434.1 3912295 3914292 R Code: NT; COG: COG0840; chemotaxis transducer complement(3912295..3914292) Pseudomonas stutzeri A1501 5096585 YP_001174095.1 CDS PST_3625 NC_009434.1 3914636 3915472 R Code: V; COG: COG3725; inner membrane protein AmpE complement(3914636..3915472) Pseudomonas stutzeri A1501 5096586 YP_001174096.1 CDS ampD NC_009434.1 3915488 3916039 R Code: V; COG: COG3023; N-acetyl-anhydromuranmyl-L-alanine amidase complement(3915488..3916039) Pseudomonas stutzeri A1501 5096587 YP_001174097.1 CDS PST_3627 NC_009434.1 3916143 3916868 R Code: L; COG: COG1515; endonuclease V complement(3916143..3916868) Pseudomonas stutzeri A1501 5096588 YP_001174098.1 CDS PST_3628 NC_009434.1 3917116 3918012 D Code: K; COG: COG4977; transcriptional regulator 3917116..3918012 Pseudomonas stutzeri A1501 5096589 YP_001174099.1 CDS PST_3629 NC_009434.1 3918154 3919248 R Code: R; COG: COG1485; ATPase complement(3918154..3919248) Pseudomonas stutzeri A1501 5096590 YP_001174100.1 CDS trpS NC_009434.1 3919417 3920775 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(3919417..3920775) Pseudomonas stutzeri A1501 5096591 YP_001174101.1 CDS PST_3631 NC_009434.1 3920827 3921453 R Code: R; COG: COG2945; alpha/beta superfamily hydrolase complement(3920827..3921453) Pseudomonas stutzeri A1501 5096592 YP_001174102.1 CDS PST_3632 NC_009434.1 3921526 3922020 D Code: S; COG: COG3105; hypothetical protein 3921526..3922020 Pseudomonas stutzeri A1501 5096593 YP_001174103.1 CDS nadC NC_009434.1 3922061 3922909 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase complement(3922061..3922909) Pseudomonas stutzeri A1501 5096594 YP_001174104.1 CDS PST_3634 NC_009434.1 3923336 3925594 D thymidine phosphorylase 3923336..3925594 Pseudomonas stutzeri A1501 5096595 YP_001174105.1 CDS ndh NC_009434.1 3925938 3927233 D Code: C; COG: COG1252; NADH dehydrogenase 3925938..3927233 Pseudomonas stutzeri A1501 5096596 YP_001174106.1 CDS PST_3636 NC_009434.1 3927257 3927415 D hypothetical protein 3927257..3927415 Pseudomonas stutzeri A1501 5096597 YP_001174107.1 CDS clpB NC_009434.1 3927781 3930345 R Code: O; COG: COG0542; ClpB protein complement(3927781..3930345) Pseudomonas stutzeri A1501 5096601 YP_001174108.1 CDS PST_3641 NC_009434.1 3930505 3931242 R Code: S; COG: COG1496; hypothetical protein complement(3930505..3931242) Pseudomonas stutzeri A1501 5096602 YP_001174109.1 CDS rluD NC_009434.1 3931239 3932213 R Code: J; COG: COG0564; pseudouridine synthase complement(3931239..3932213) Pseudomonas stutzeri A1501 5096603 YP_001174110.1 CDS comL NC_009434.1 3932283 3933407 D Code: R; COG: COG4105; competence protein ComL 3932283..3933407 Pseudomonas stutzeri A1501 5096604 YP_001174111.1 CDS PST_3644 NC_009434.1 3933442 3933762 D hypothetical protein 3933442..3933762 Pseudomonas stutzeri A1501 5096605 YP_001174112.1 CDS pilS NC_009434.1 3933752 3935344 D Code: T; COG: COG0642; two-component sensor PilS 3933752..3935344 Pseudomonas stutzeri A1501 5096606 YP_001174113.1 CDS pilR NC_009434.1 3935421 3936812 D Code: T; COG: COG2204; two-component response regulator PilR 3935421..3936812 Pseudomonas stutzeri A1501 5096607 YP_001174114.1 CDS PST_3647 NC_009434.1 3936856 3937914 R Code: S; COG: COG5345; hypothetical protein complement(3936856..3937914) Pseudomonas stutzeri A1501 5096608 YP_001174115.1 CDS PST_3648 NC_009434.1 3938132 3939727 D Code: T; COG: COG3706; two-component response regulator 3938132..3939727 Pseudomonas stutzeri A1501 5096609 YP_001174116.1 CDS ctpL NC_009434.1 3939855 3941816 D Code: NT; COG: COG0840; methyl-accepting chemotaxis transducer for inorganic phosphate CtpL 3939855..3941816 Pseudomonas stutzeri A1501 5096610 YP_001174117.1 CDS PST_3650 NC_009434.1 3941856 3944045 R Code: C; COG: COG1032; hypothetical protein complement(3941856..3944045) Pseudomonas stutzeri A1501 5096611 YP_001174118.1 CDS dadX NC_009434.1 3946154 3947230 R Code: M; COG: COG0787; alanine racemase, catabolic complement(3946154..3947230) Pseudomonas stutzeri A1501 5096612 YP_001174119.1 CDS dnaB NC_009434.1 3947355 3948620 R unwinds double stranded DNA; replicative DNA helicase complement(3947355..3948620) Pseudomonas stutzeri A1501 5096613 YP_001174120.1 CDS rplI NC_009434.1 3948854 3949300 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(3948854..3949300) Pseudomonas stutzeri A1501 5096614 YP_001174121.1 CDS PST_3654 NC_009434.1 3949322 3950215 R hypothetical protein complement(3949322..3950215) Pseudomonas stutzeri A1501 5096615 YP_001174122.1 CDS rpsR NC_009434.1 3950250 3950480 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(3950250..3950480) Pseudomonas stutzeri A1501 5096616 YP_001174123.1 CDS rpsF NC_009434.1 3950509 3950925 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(3950509..3950925) Pseudomonas stutzeri A1501 5096617 YP_001174124.1 CDS PST_3657 NC_009434.1 3951105 3953261 R sensory box histidine kinase/response regulator complement(3951105..3953261) Pseudomonas stutzeri A1501 5096618 YP_001174125.1 CDS PST_3658 NC_009434.1 3953434 3954189 R Code: J; COG: COG0566; RNA methyltransferase complement(3953434..3954189) Pseudomonas stutzeri A1501 5096619 YP_001174126.1 CDS vacB NC_009434.1 3954186 3956687 R Code: K; COG: COG0557; ribonuclease R complement(3954186..3956687) Pseudomonas stutzeri A1501 5096620 YP_001174127.1 CDS PST_3661 NC_009434.1 3956925 3957080 R hypothetical protein complement(3956925..3957080) Pseudomonas stutzeri A1501 5096622 YP_001174128.1 CDS purA NC_009434.1 3957320 3958522 R Code: F; COG: COG0104; adenylosuccinate synthetase complement(3957320..3958522) Pseudomonas stutzeri A1501 5096624 YP_001174129.1 CDS hisZ NC_009434.1 3958706 3959893 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(3958706..3959893) Pseudomonas stutzeri A1501 5096625 YP_001174130.1 CDS hflC NC_009434.1 3960178 3961044 R Code: O; COG: COG0330; HflC protein complement(3960178..3961044) Pseudomonas stutzeri A1501 5096626 YP_001174131.1 CDS hflK NC_009434.1 3961044 3962222 R Code: O; COG: COG0330; HflK protein complement(3961044..3962222) Pseudomonas stutzeri A1501 5096627 YP_001174132.1 CDS hflX NC_009434.1 3962321 3963580 R Code: R; COG: COG2262; GTP-binding protein HflX complement(3962321..3963580) Pseudomonas stutzeri A1501 5096628 YP_001174133.1 CDS hfq NC_009434.1 3963634 3963888 R Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(3963634..3963888) Pseudomonas stutzeri A1501 5096629 YP_001174134.1 CDS miaA NC_009434.1 3963981 3964979 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(3963981..3964979) Pseudomonas stutzeri A1501 5096630 YP_001174135.1 CDS mutL NC_009434.1 3965034 3966911 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(3965034..3966911) Pseudomonas stutzeri A1501 5096631 YP_001174136.1 CDS amiB NC_009434.1 3966908 3968335 R Code: M; COG: COG0860; N-acetylmuramoyl-L-alanine amidase complement(3966908..3968335) Pseudomonas stutzeri A1501 5096632 YP_001174137.1 CDS PST_3672 NC_009434.1 3968341 3968811 R Code: R; COG: COG0802; ATPase or kinase complement(3968341..3968811) Pseudomonas stutzeri A1501 5096633 YP_001174138.1 CDS PST_3673 NC_009434.1 3968799 3970289 R hypothetical protein complement(3968799..3970289) Pseudomonas stutzeri A1501 5096634 YP_001174139.1 CDS PST_3674 NC_009434.1 3970441 3971436 D Code: C; COG: COG1600; iron-sulfur cluster-binding protein 3970441..3971436 Pseudomonas stutzeri A1501 5096635 YP_001174140.1 CDS ftsH-2 NC_009434.1 3971446 3973251 R Code: O; COG: COG0465; cell division protein FtsH complement(3971446..3973251) Pseudomonas stutzeri A1501 5096636 YP_001174141.1 CDS PST_3676 NC_009434.1 3973381 3973671 R Code: R; COG: COG5645; putative lipoprotein complement(3973381..3973671) Pseudomonas stutzeri A1501 5096637 YP_001174142.1 CDS PST_3677 NC_009434.1 3973673 3974302 R Code: H; COG: COG0163; aromatic acid decarboxylase complement(3973673..3974302) Pseudomonas stutzeri A1501 5096638 YP_001174143.1 CDS mpl NC_009434.1 3974614 3976071 R Code: M; COG: COG0773; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(3974614..3976071) Pseudomonas stutzeri A1501 5096639 YP_001174144.1 CDS PST_3679 NC_009434.1 3976153 3977673 D Code: C; COG: COG1012; aldehyde dehydrogenase family protein 3976153..3977673 Pseudomonas stutzeri A1501 5096640 YP_001174145.1 CDS PST_3680 NC_009434.1 3977872 3979320 D Code: E; COG: COG0531; ethanolamine transporter 3977872..3979320 Pseudomonas stutzeri A1501 5096641 YP_001174146.1 CDS eutB NC_009434.1 3979332 3980723 D Code: E; COG: COG4303; ethanolamine ammonia-lyase large subunit 3979332..3980723 Pseudomonas stutzeri A1501 5096642 YP_001174147.1 CDS eutC NC_009434.1 3980845 3981627 D catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 3980845..3981627 Pseudomonas stutzeri A1501 5096643 YP_001174148.1 CDS PST_3683 NC_009434.1 3981634 3983205 R Code: P; COG: COG3540; Tat pathway signal sequence domain-containing protein complement(3981634..3983205) Pseudomonas stutzeri A1501 5096644 YP_001174149.1 CDS PST_3684 NC_009434.1 3983290 3983718 R Code: J; COG: COG0251; YjgF family translation initiation inhibitor complement(3983290..3983718) Pseudomonas stutzeri A1501 5096645 YP_001174150.1 CDS PST_3685 NC_009434.1 3983844 3984734 D Code: S; COG: COG3228; hypothetical protein 3983844..3984734 Pseudomonas stutzeri A1501 5096646 YP_001174151.1 CDS ppa-1 NC_009434.1 3984843 3985370 D catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 3984843..3985370 Pseudomonas stutzeri A1501 5096647 YP_001174152.1 CDS PST_3687 NC_009434.1 3985459 3986859 R diguanylate cyclase complement(3985459..3986859) Pseudomonas stutzeri A1501 5096648 YP_001174153.1 CDS PST_3688 NC_009434.1 3987034 3987597 D hypothetical protein 3987034..3987597 Pseudomonas stutzeri A1501 5096649 YP_001174154.1 CDS PST_3689 NC_009434.1 3987740 3988675 D Code: P; COG: COG0715; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 3987740..3988675 Pseudomonas stutzeri A1501 5096650 YP_001174155.1 CDS PST_3690 NC_009434.1 3988669 3990735 D hypothetical protein 3988669..3990735 Pseudomonas stutzeri A1501 5096651 YP_001174156.1 CDS PST_3691 NC_009434.1 3990011 3991057 D hypothetical protein 3990011..3991057 Pseudomonas stutzeri A1501 5096652 YP_001174157.1 CDS PST_3692 NC_009434.1 3991144 3992322 D PpiC-type peptidyl-prolyl cis-trans isomerase 3991144..3992322 Pseudomonas stutzeri A1501 5096653 YP_001174158.1 CDS PST_3693 NC_009434.1 3992355 3995471 R Code: C; COG: COG0243; tetrathionate reductase subunit A complement(3992355..3995471) Pseudomonas stutzeri A1501 5096654 YP_001174159.1 CDS PST_3694 NC_009434.1 3995487 3996524 R tetrathionate reductase subunit C complement(3995487..3996524) Pseudomonas stutzeri A1501 5096655 YP_001174160.1 CDS PST_3695 NC_009434.1 3996535 3997299 R Code: C; COG: COG0437; tetrathionate reductase subunit B complement(3996535..3997299) Pseudomonas stutzeri A1501 5096656 YP_001174161.1 CDS PST_3696 NC_009434.1 3997345 3998175 R Code: OC; COG: COG0526; thiol-disulfide isomerase and thioredoxin complement(3997345..3998175) Pseudomonas stutzeri A1501 5096657 YP_001174162.1 CDS PST_3697 NC_009434.1 3998338 3998514 R hypothetical protein complement(3998338..3998514) Pseudomonas stutzeri A1501 5096658 YP_001174163.1 CDS PST_3698 NC_009434.1 3998720 3999979 D Code: E; COG: COG0076; tyrosine decarboxylase 3998720..3999979 Pseudomonas stutzeri A1501 5096659 YP_001174164.1 CDS PST_3699 NC_009434.1 3999976 4001295 D Code: Q; COG: COG3486; putative siderophore biosynthetic protein 3999976..4001295 Pseudomonas stutzeri A1501 5096660 YP_001174165.1 CDS PST_3700 NC_009434.1 4001319 4002446 D hypothetical protein 4001319..4002446 Pseudomonas stutzeri A1501 5096661 YP_001174166.1 CDS PST_3701 NC_009434.1 4002443 4003030 D Code: J; COG: COG1670; putative siderophore biosynthetic protein 4002443..4003030 Pseudomonas stutzeri A1501 5096662 YP_001174167.1 CDS PST_3702 NC_009434.1 4003027 4004811 D Code: Q; COG: COG4264; siderophore biosynthesis protein 4003027..4004811 Pseudomonas stutzeri A1501 5096663 YP_001174168.1 CDS PST_3703 NC_009434.1 4004795 4005556 D hypothetical protein 4004795..4005556 Pseudomonas stutzeri A1501 5096664 YP_001174169.1 CDS xseB NC_009434.1 4005612 4005953 D Code: L; COG: COG1722; exodeoxyribonuclease VII small subunit 4005612..4005953 Pseudomonas stutzeri A1501 5096665 YP_001174170.1 CDS ispA NC_009434.1 4005953 4006840 D Code: H; COG: COG0142; geranyltranstransferase 4005953..4006840 Pseudomonas stutzeri A1501 5096666 YP_001174171.1 CDS dxs NC_009434.1 4006948 4008846 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 4006948..4008846 Pseudomonas stutzeri A1501 5096667 YP_001174172.1 CDS PST_3707 NC_009434.1 4008946 4009539 R Code: S; COG: COG1432; hypothetical protein complement(4008946..4009539) Pseudomonas stutzeri A1501 5096668 YP_001174173.1 CDS PST_3708 NC_009434.1 4009539 4010219 D hypothetical protein 4009539..4010219 Pseudomonas stutzeri A1501 5096669 YP_001174174.1 CDS PST_3709 NC_009434.1 4010296 4010724 D Code: E; COG: COG0346; lactoylglutathione lyase 4010296..4010724 Pseudomonas stutzeri A1501 5096670 YP_001174175.1 CDS PST_3710 NC_009434.1 4010735 4011562 R Code: IQR; COG: COG1028; short chain dehydrogenase complement(4010735..4011562) Pseudomonas stutzeri A1501 5096671 YP_001174176.1 CDS PST_3711 NC_009434.1 4011644 4012450 D hypothetical protein 4011644..4012450 Pseudomonas stutzeri A1501 5096672 YP_001174177.1 CDS PST_3712 NC_009434.1 4012454 4014979 R Code: L; COG: COG1643; ATP-dependent helicase HrpB complement(4012454..4014979) Pseudomonas stutzeri A1501 5096673 YP_001174178.1 CDS PST_3713 NC_009434.1 4015039 4015539 R hypothetical protein complement(4015039..4015539) Pseudomonas stutzeri A1501 5096674 YP_001174179.1 CDS PST_3714 NC_009434.1 4015729 4016145 D hypothetical protein 4015729..4016145 Pseudomonas stutzeri A1501 5096675 YP_001174180.1 CDS PST_3715 NC_009434.1 4016171 4017061 D Code: P; COG: COG0053; cation efflux family protein 4016171..4017061 Pseudomonas stutzeri A1501 5096676 YP_001174181.1 CDS PST_3716 NC_009434.1 4017377 4017946 D Code: K; COG: COG1522; transcriptional regulator 4017377..4017946 Pseudomonas stutzeri A1501 5096677 YP_001174182.1 CDS PST_3717 NC_009434.1 4018095 4018487 D hypothetical protein 4018095..4018487 Pseudomonas stutzeri A1501 5096678 YP_001174183.1 CDS PST_3718 NC_009434.1 4018693 4018881 D hypothetical protein 4018693..4018881 Pseudomonas stutzeri A1501 5096679 YP_001174184.1 CDS PST_3719 NC_009434.1 4018903 4019532 R Code: J; COG: COG1187; pseudouridine synthase complement(4018903..4019532) Pseudomonas stutzeri A1501 5096680 YP_001174185.1 CDS PST_3720 NC_009434.1 4019813 4021081 D Code: E; COG: COG0683; branched-chain amino acid ABC transporter substrate-binding protein 4019813..4021081 Pseudomonas stutzeri A1501 5096681 YP_001174186.1 CDS PST_3721 NC_009434.1 4021258 4022829 D Code: E; COG: COG0559; branched-chain amino acid ABC transporter permease 4021258..4022829 Pseudomonas stutzeri A1501 5096682 YP_001174187.1 CDS PST_3722 NC_009434.1 4022826 4023905 D Code: E; COG: COG4177; branched-chain amino acid ABC transporter permease 4022826..4023905 Pseudomonas stutzeri A1501 5096683 YP_001174188.1 CDS PST_3723 NC_009434.1 4023902 4024753 D Code: R; COG: COG4674; branched-chain amino acid ABC transporter ATP-binding protein 4023902..4024753 Pseudomonas stutzeri A1501 5096684 YP_001174189.1 CDS PST_3724 NC_009434.1 4024879 4025577 D Code: E; COG: COG0410; branched-chain amino acid ABC transporter ATP-binding protein 4024879..4025577 Pseudomonas stutzeri A1501 5096685 YP_001174190.1 CDS PST_3725 NC_009434.1 4025682 4029230 D Code: P; COG: COG0474; Mg2+ transport ATPase 4025682..4029230 Pseudomonas stutzeri A1501 5096686 YP_001174191.1 CDS ureD-2 NC_009434.1 4029163 4030251 D Code: O; COG: COG0829; urease accessory protein UreD 4029163..4030251 Pseudomonas stutzeri A1501 5096687 YP_001174192.1 CDS ureA NC_009434.1 4030392 4030694 D UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 4030392..4030694 Pseudomonas stutzeri A1501 5096688 YP_001174193.1 CDS ureB NC_009434.1 4031257 4031562 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 4031257..4031562 Pseudomonas stutzeri A1501 5096689 YP_001174194.1 CDS ureC NC_009434.1 4031583 4033364 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 4031583..4033364 Pseudomonas stutzeri A1501 5096690 YP_001174195.1 CDS PST_3730 NC_009434.1 4033494 4034675 D sensor histidine kinase 4033494..4034675 Pseudomonas stutzeri A1501 5096691 YP_001174196.1 CDS PST_3731 NC_009434.1 4034676 4035071 R Code: T; COG: COG1734; hypothetical protein complement(4034676..4035071) Pseudomonas stutzeri A1501 5096692 YP_001174197.1 CDS PST_3732 NC_009434.1 4035146 4035871 D hypothetical protein 4035146..4035871 Pseudomonas stutzeri A1501 5096693 YP_001174198.1 CDS bcpA NC_009434.1 4035879 4036742 R Code: G; COG: COG2513; carboxyphosphonoenolpyruvate phosphonomutase complement(4035879..4036742) Pseudomonas stutzeri A1501 5096694 YP_001174199.1 CDS PST_3734 NC_009434.1 4036843 4037715 R Code: GER; COG: COG0697; hypothetical protein complement(4036843..4037715) Pseudomonas stutzeri A1501 5096695 YP_001174200.1 CDS PST_3735 NC_009434.1 4037899 4038468 D histone acetyltransferase HPA2 4037899..4038468 Pseudomonas stutzeri A1501 5096696 YP_001174201.2 CDS ureE NC_009434.1 4038632 4039132 D involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 4038632..4039132 Pseudomonas stutzeri A1501 5096697 YP_001174202.1 CDS ureF-2 NC_009434.1 4039228 4039821 D Code: O; COG: COG0830; urease accessory protein UreF 4039228..4039821 Pseudomonas stutzeri A1501 5096698 YP_001174203.1 CDS ureG NC_009434.1 4040930 4041544 D Code: OK; COG: COG0378; urease accessory protein UreG 4040930..4041544 Pseudomonas stutzeri A1501 5096699 YP_001174204.1 CDS ureJ NC_009434.1 4041574 4042146 D Code: O; COG: COG2370; urease accessory protein UreJ 4041574..4042146 Pseudomonas stutzeri A1501 5096700 YP_001174205.1 CDS PST_3740 NC_009434.1 4042308 4042667 D hypothetical protein 4042308..4042667 Pseudomonas stutzeri A1501 5096701 YP_001174206.1 CDS PST_3741 NC_009434.1 4042677 4044719 D Code: G; COG: COG4993; glucose dehydrogenase 4042677..4044719 Pseudomonas stutzeri A1501 5096702 YP_001174207.1 CDS amn NC_009434.1 4044720 4046192 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(4044720..4046192) Pseudomonas stutzeri A1501 5096703 YP_001174208.1 CDS PST_3743 NC_009434.1 4046207 4047676 R Code: KE; COG: COG1167; GntR family transcriptional regulator complement(4046207..4047676) Pseudomonas stutzeri A1501 5096704 YP_001174209.1 CDS PST_3744 NC_009434.1 4047907 4048647 D Code: E; COG: COG1171; hypothetical protein 4047907..4048647 Pseudomonas stutzeri A1501 5096705 YP_001174210.1 CDS PST_3745 NC_009434.1 4048801 4051038 D Code: R; COG: COG1203; CRISPR-associated helicase Cas3 domain-containing protein 4048801..4051038 Pseudomonas stutzeri A1501 5096706 YP_001174211.1 CDS PST_3746 NC_009434.1 4051153 4051827 D CRISPR-associated Cas5d family protein 4051153..4051827 Pseudomonas stutzeri A1501 5096707 YP_001174212.1 CDS PST_3747 NC_009434.1 4051824 4053611 D CRISPR-associated Csd1 family protein 4051824..4053611 Pseudomonas stutzeri A1501 5096708 YP_001174213.1 CDS PST_3748 NC_009434.1 4053608 4054477 D Code: L; COG: COG3649; CRISPR-associated Csh2 family protein 4053608..4054477 Pseudomonas stutzeri A1501 5096709 YP_001174214.1 CDS PST_3749 NC_009434.1 4054497 4055129 D Code: L; COG: COG1468; CRISPR-associated Cas4 family protein 4054497..4055129 Pseudomonas stutzeri A1501 5096710 YP_001174215.1 CDS PST_3750 NC_009434.1 4055250 4056173 D Code: L; COG: COG1518; CRISPR-associated Cas1 family protein 4055250..4056173 Pseudomonas stutzeri A1501 5096711 YP_001174216.1 CDS PST_3751 NC_009434.1 4056174 4056473 D Code: L; COG: COG1343; CRISPR-associated Cas2 family protein 4056174..4056473 Pseudomonas stutzeri A1501 5096712 YP_001174217.1 CDS PST_3752 NC_009434.1 4058780 4059676 R hypothetical protein complement(4058780..4059676) Pseudomonas stutzeri A1501 5096713 YP_001174218.1 CDS PST_3753 NC_009434.1 4059698 4060702 D Code: P; COG: COG1226; voltage-gated sodium channel subunit 4059698..4060702 Pseudomonas stutzeri A1501 5096714 YP_001174219.1 CDS PST_3754 NC_009434.1 4060745 4062604 R Code: I; COG: COG1960; acyl-CoA dehydrogenase complement(4060745..4062604) Pseudomonas stutzeri A1501 5096715 YP_001174220.1 CDS PST_3755 NC_009434.1 4062540 4064540 R two-component sensor complement(4062540..4064540) Pseudomonas stutzeri A1501 5096716 YP_001174221.1 CDS thiD NC_009434.1 4064707 4065570 D catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 4064707..4065570 Pseudomonas stutzeri A1501 5096717 YP_001174222.1 CDS thiE NC_009434.1 4065585 4066226 D Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 4065585..4066226 Pseudomonas stutzeri A1501 5096718 YP_001174223.1 CDS hemL NC_009434.1 4066280 4067563 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 4066280..4067563 Pseudomonas stutzeri A1501 5096719 YP_001174224.1 CDS PST_3759 NC_009434.1 4067560 4068183 D hypothetical protein 4067560..4068183 Pseudomonas stutzeri A1501 5096720 YP_001174225.1 CDS PST_3760 NC_009434.1 4068301 4068837 D Code: R; COG: COG0790; Sel1 repeat-containing protein 4068301..4068837 Pseudomonas stutzeri A1501 5096721 YP_001174226.1 CDS miaB NC_009434.1 4069034 4070254 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 4069034..4070254 Pseudomonas stutzeri A1501 5096722 YP_001174227.1 CDS PST_3762 NC_009434.1 4070386 4071393 D Code: T; COG: COG1702; PhoH-like protein 4070386..4071393 Pseudomonas stutzeri A1501 5096723 YP_001174228.1 CDS PST_3763 NC_009434.1 4071386 4071868 D Code: R; COG: COG0319; putative metalloprotease 4071386..4071868 Pseudomonas stutzeri A1501 5096724 YP_001174229.1 CDS PST_3764 NC_009434.1 4071878 4072720 D Code: P; COG: COG4535; metal ion transporter 4071878..4072720 Pseudomonas stutzeri A1501 5096725 YP_001174230.1 CDS lnt NC_009434.1 4072782 4074335 D Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 4072782..4074335 Pseudomonas stutzeri A1501 5096726 YP_001174231.1 CDS PST_3766 NC_009434.1 4074376 4075149 R Code: S; COG: COG1434; transmembrane protein complement(4074376..4075149) Pseudomonas stutzeri A1501 5096727 YP_001174232.1 CDS PST_3767 NC_009434.1 4075215 4075667 R hypothetical protein complement(4075215..4075667) Pseudomonas stutzeri A1501 5096728 YP_001174233.1 CDS leuS NC_009434.1 4075816 4078536 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 4075816..4078536 Pseudomonas stutzeri A1501 5096729 YP_001174234.1 CDS PST_3769 NC_009434.1 4078580 4079185 D Code: M; COG: COG2980; putative lipoprotein 4078580..4079185 Pseudomonas stutzeri A1501 5096730 YP_001174235.1 CDS holA NC_009434.1 4079223 4080254 D required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 4079223..4080254 Pseudomonas stutzeri A1501 5096731 YP_001174236.1 CDS PST_3771 NC_009434.1 4080291 4080491 D Code: S; COG: COG3036; hypothetical protein 4080291..4080491 Pseudomonas stutzeri A1501 5096732 YP_001174237.1 CDS PST_3772 NC_009434.1 4080512 4081852 D Code: M; COG: COG2951; membrane-bound lytic murein transglycosylase 4080512..4081852 Pseudomonas stutzeri A1501 5096733 YP_001174238.1 CDS PST_3773 NC_009434.1 4081938 4082336 R hypothetical protein complement(4081938..4082336) Pseudomonas stutzeri A1501 5096734 YP_001174239.1 CDS lipA NC_009434.1 4082483 4083460 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(4082483..4083460) Pseudomonas stutzeri A1501 5096735 YP_001174240.1 CDS lipB NC_009434.1 4083453 4084112 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(4083453..4084112) Pseudomonas stutzeri A1501 5096736 YP_001174241.1 CDS PST_3776 NC_009434.1 4084109 4084393 R Code: S; COG: COG2921; hypothetical protein complement(4084109..4084393) Pseudomonas stutzeri A1501 5096737 YP_001174242.1 CDS dacA NC_009434.1 4084460 4085617 R Code: M; COG: COG1686; D-alanyl-D-alanine carboxypeptidase complement(4084460..4085617) Pseudomonas stutzeri A1501 5096738 YP_001174243.1 CDS PST_3778 NC_009434.1 4085665 4086657 R Code: M; COG: COG0797; RlpA family lipoprotein complement(4085665..4086657) Pseudomonas stutzeri A1501 5096739 YP_001174244.1 CDS mltB NC_009434.1 4086654 4087631 R Code: M; COG: COG2951; membrane-bound lytic murein transglycosylase B complement(4086654..4087631) Pseudomonas stutzeri A1501 5096740 YP_001174245.1 CDS rodA NC_009434.1 4087679 4088824 R Code: D; COG: COG0772; rod-shape-determining protein RodA complement(4087679..4088824) Pseudomonas stutzeri A1501 5096741 YP_001174246.1 CDS mrdA-2 NC_009434.1 4088821 4090710 R Code: M; COG: COG0768; penicillin-binding protein 2 complement(4088821..4090710) Pseudomonas stutzeri A1501 5096742 YP_001174247.2 CDS PST_3782 NC_009434.1 4090729 4091196 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(4090729..4091196) Pseudomonas stutzeri A1501 5096743 YP_001174248.1 CDS PST_3783 NC_009434.1 4091200 4091559 R Code: S; COG: COG0799; iojap-like protein complement(4091200..4091559) Pseudomonas stutzeri A1501 5096744 YP_001174249.1 CDS nadD NC_009434.1 4091575 4092177 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(4091575..4092177) Pseudomonas stutzeri A1501 5096745 YP_001174250.1 CDS proA NC_009434.1 4092234 4093499 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(4092234..4093499) Pseudomonas stutzeri A1501 5096746 YP_001174251.1 CDS PST_3786 NC_009434.1 4093583 4095034 D PAP2 family protein/DedA family protein 4093583..4095034 Pseudomonas stutzeri A1501 5096747 YP_001174252.1 CDS PST_3787 NC_009434.1 4095051 4095635 R Code: R; COG: COG2802; ATP-dependent protease La complement(4095051..4095635) Pseudomonas stutzeri A1501 5096748 YP_001174253.1 CDS PST_3788 NC_009434.1 4095646 4096362 R Code: M; COG: COG1346; hypothetical protein complement(4095646..4096362) Pseudomonas stutzeri A1501 5096749 YP_001174254.1 CDS PST_3789 NC_009434.1 4096362 4096724 R Code: R; COG: COG1380; LrgA family protein complement(4096362..4096724) Pseudomonas stutzeri A1501 5096750 YP_001174255.1 CDS PST_3790 NC_009434.1 4096788 4097384 D Code: I; COG: COG2030; MaoC domain-containing protein 4096788..4097384 Pseudomonas stutzeri A1501 5096751 YP_001174256.1 CDS PST_3791 NC_009434.1 4097462 4099135 D Code: S; COG: COG4642; MorN domain-containing protein 4097462..4099135 Pseudomonas stutzeri A1501 5096752 YP_001174257.1 CDS PST_3792 NC_009434.1 4099155 4099796 D Code: MG; COG: COG0702; nucleoside-diphosphate-sugar epimerase 4099155..4099796 Pseudomonas stutzeri A1501 5096753 YP_001174258.1 CDS orn NC_009434.1 4099903 4100445 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(4099903..4100445) Pseudomonas stutzeri A1501 5096754 YP_001174259.1 CDS PST_3794 NC_009434.1 4100474 4101280 R hypothetical protein complement(4100474..4101280) Pseudomonas stutzeri A1501 5096755 YP_001174260.1 CDS PST_3795 NC_009434.1 4101362 4102435 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 4101362..4102435 Pseudomonas stutzeri A1501 5096756 YP_001174261.1 CDS motB NC_009434.1 4102448 4103458 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(4102448..4103458) Pseudomonas stutzeri A1501 5096757 YP_001174262.1 CDS motA NC_009434.1 4103468 4104319 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(4103468..4104319) Pseudomonas stutzeri A1501 5096758 YP_001174263.1 CDS PST_3798 NC_009434.1 4104484 4106007 D signal transduction protein 4104484..4106007 Pseudomonas stutzeri A1501 5096759 YP_001174264.1 CDS rhdA NC_009434.1 4106055 4106870 D Code: P; COG: COG2897; thiosulfate sulfurtransferase 4106055..4106870 Pseudomonas stutzeri A1501 5096760 YP_001174265.1 CDS psd NC_009434.1 4106882 4107775 D catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 4106882..4107775 Pseudomonas stutzeri A1501 5096761 YP_001174266.1 CDS PST_3801 NC_009434.1 4107920 4109761 D molecular chaperone 4107920..4109761 Pseudomonas stutzeri A1501 5096762 YP_001174267.1 CDS PST_3802 NC_009434.1 4109928 4111889 D hypothetical protein 4109928..4111889 Pseudomonas stutzeri A1501 5096763 YP_001174268.1 CDS PST_3803 NC_009434.1 4112023 4113096 D Code: ER; COG: COG1063; alcohol dehydrogenase 4112023..4113096 Pseudomonas stutzeri A1501 5096764 YP_001174269.1 CDS serB NC_009434.1 4113145 4114395 R phosphoserine phosphatase complement(4113145..4114395) Pseudomonas stutzeri A1501 5096765 YP_001174270.1 CDS PST_3804 NC_009434.1 4114372 4116081 D hypothetical protein 4114372..4116081 Pseudomonas stutzeri A1501 5096766 YP_001174271.1 CDS PST_3806 NC_009434.1 4116240 4116956 R Code: S; COG: COG3009; putative lipoprotein complement(4116240..4116956) Pseudomonas stutzeri A1501 5096767 YP_001174272.1 CDS parC NC_009434.1 4117130 4119382 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(4117130..4119382) Pseudomonas stutzeri A1501 5096768 YP_001174273.1 CDS PST_3808 NC_009434.1 4119379 4119870 R Code: R; COG: COG3577; aspartyl protease complement(4119379..4119870) Pseudomonas stutzeri A1501 5096769 YP_001174274.1 CDS PST_3809 NC_009434.1 4119903 4120886 R hypothetical protein complement(4119903..4120886) Pseudomonas stutzeri A1501 5096770 YP_001174275.1 CDS parE NC_009434.1 4120883 4122895 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(4120883..4122895) Pseudomonas stutzeri A1501 5096771 YP_001174276.1 CDS PST_3811 NC_009434.1 4122908 4123588 R Code: R; COG: COG3150; esterase complement(4122908..4123588) Pseudomonas stutzeri A1501 5096772 YP_001174277.1 CDS PST_3812 NC_009434.1 4123630 4124430 R Code: R; COG: COG1409; Ser/Thr protein phosphatase complement(4123630..4124430) Pseudomonas stutzeri A1501 5096773 YP_001174278.1 CDS PST_3813 NC_009434.1 4124597 4125043 R Code: S; COG: COG3151; hypothetical protein complement(4124597..4125043) Pseudomonas stutzeri A1501 5096774 YP_001174279.1 CDS PST_3814 NC_009434.1 4125040 4125657 R Code: LR; COG: COG0494; MutT/nudix family protein complement(4125040..4125657) Pseudomonas stutzeri A1501 5096775 YP_001174280.1 CDS PST_3815 NC_009434.1 4125774 4126610 D putative lipoprotein 4125774..4126610 Pseudomonas stutzeri A1501 5096776 YP_001174281.1 CDS thiC NC_009434.1 4126696 4128579 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(4126696..4128579) Pseudomonas stutzeri A1501 5096777 YP_001174282.1 CDS PST_3817 NC_009434.1 4128925 4130412 D Code: MU; COG: COG1538; outer membrane efflux protein TolC 4128925..4130412 Pseudomonas stutzeri A1501 5096778 YP_001174283.1 CDS kdtA NC_009434.1 4130531 4131799 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(4130531..4131799) Pseudomonas stutzeri A1501 5096779 YP_001174284.1 CDS PST_3819 NC_009434.1 4131885 4132244 D Code: P; COG: COG2076; multidrug efflux SMR transporter 4131885..4132244 Pseudomonas stutzeri A1501 5096780 YP_001174285.1 CDS PST_3820 NC_009434.1 4132300 4133475 D Code: C; COG: COG0578; oxidoreductase, FAD-binding 4132300..4133475 Pseudomonas stutzeri A1501 5096781 YP_001174286.1 CDS PST_3821 NC_009434.1 4133472 4134281 D Code: C; COG: COG0667; aldo/keto reductase family oxidoreductase 4133472..4134281 Pseudomonas stutzeri A1501 5096782 YP_001174287.1 CDS PST_3822 NC_009434.1 4134367 4135254 D hypothetical protein 4134367..4135254 Pseudomonas stutzeri A1501 5096783 YP_001174288.1 CDS PST_3823 NC_009434.1 4135459 4136829 D related to capsule biosynthesis enzyme; Code: R; COG: COG3550; hypothetical protein 4135459..4136829 Pseudomonas stutzeri A1501 5096784 YP_001174289.1 CDS PST_3824 NC_009434.1 4136799 4137065 D transcriptional regulator 4136799..4137065 Pseudomonas stutzeri A1501 5096785 YP_001174290.1 CDS rfaE NC_009434.1 4137401 4138822 R catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(4137401..4138822) Pseudomonas stutzeri A1501 5096786 YP_001174291.1 CDS PST_3826 NC_009434.1 4139116 4140003 D hypothetical protein 4139116..4140003 Pseudomonas stutzeri A1501 5096787 YP_001174292.1 CDS PST_3827 NC_009434.1 4140362 4141717 R hypothetical protein complement(4140362..4141717) Pseudomonas stutzeri A1501 5096788 YP_001174293.1 CDS PST_3828 NC_009434.1 4141779 4142675 R hypothetical protein complement(4141779..4142675) Pseudomonas stutzeri A1501 5096789 YP_001174294.1 CDS PST_3829 NC_009434.1 4142675 4143355 R InaA protein complement(4142675..4143355) Pseudomonas stutzeri A1501 5096790 YP_001174295.1 CDS msbA NC_009434.1 4143352 4145190 R Code: V; COG: COG1132; transport protein MsbA complement(4143352..4145190) Pseudomonas stutzeri A1501 5096791 YP_001174296.1 CDS PST_3831 NC_009434.1 4145225 4145833 D toluene tolerance protein 4145225..4145833 Pseudomonas stutzeri A1501 5096792 YP_001174297.1 CDS PST_3832 NC_009434.1 4145812 4146984 R hypothetical protein complement(4145812..4146984) Pseudomonas stutzeri A1501 5096793 YP_001174298.1 CDS PST_3833 NC_009434.1 4146993 4147793 R putative ketal pyruvate transferase PssM complement(4146993..4147793) Pseudomonas stutzeri A1501 5096794 YP_001174299.1 CDS PST_3834 NC_009434.1 4147795 4148745 R glycosyltransferase complement(4147795..4148745) Pseudomonas stutzeri A1501 5096795 YP_001174300.1 CDS PST_3835 NC_009434.1 4148873 4149925 R Code: M; COG: COG2089; sialic acid synthase complement(4148873..4149925) Pseudomonas stutzeri A1501 5096796 YP_001174301.1 CDS PST_3836 NC_009434.1 4149937 4150503 R Code: J; COG: COG1670; flagellin modification protein FlmH complement(4149937..4150503) Pseudomonas stutzeri A1501 5096797 YP_001174302.1 CDS PST_3837 NC_009434.1 4150500 4151630 R Code: M; COG: COG3980; spore coat polysaccharide biosynthesis protein, glycosyltransferase complement(4150500..4151630) Pseudomonas stutzeri A1501 5096798 YP_001174303.1 CDS PST_3838 NC_009434.1 4151633 4152331 R Code: M; COG: COG1083; acylneuraminate cytidylyltransferase complement(4151633..4152331) Pseudomonas stutzeri A1501 5096799 YP_001174304.1 CDS wbpE NC_009434.1 4152328 4153488 R Code: M; COG: COG0399; aminotransferase WbpE complement(4152328..4153488) Pseudomonas stutzeri A1501 5096800 YP_001174305.1 CDS PST_3840 NC_009434.1 4153492 4154355 R Code: MG; COG: COG1086; UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase complement(4153492..4154355) Pseudomonas stutzeri A1501 5096801 YP_001174306.1 CDS PST_3841 NC_009434.1 4154496 4155596 R hypothetical protein complement(4154496..4155596) Pseudomonas stutzeri A1501 5096802 YP_001174307.1 CDS PST_3842 NC_009434.1 4155643 4157397 R Code: O; COG: COG2192; carbamoyl transferase complement(4155643..4157397) Pseudomonas stutzeri A1501 5096803 YP_001174308.1 CDS PST_3843 NC_009434.1 4157481 4158932 R serine/threonine protein kinase complement(4157481..4158932) Pseudomonas stutzeri A1501 5096804 YP_001174309.1 CDS PST_3844 NC_009434.1 4158929 4159633 R serine/threonine protein kinase complement(4158929..4159633) Pseudomonas stutzeri A1501 5096805 YP_001174310.1 CDS PST_3845 NC_009434.1 4159681 4160397 R serine/threonine protein kinase complement(4159681..4160397) Pseudomonas stutzeri A1501 5096806 YP_001174311.1 CDS waaP NC_009434.1 4160415 4161341 R lipopolysaccharide core biosynthesis protein WaaP complement(4160415..4161341) Pseudomonas stutzeri A1501 5096807 YP_001174312.1 CDS waaG NC_009434.1 4161418 4162539 R Code: M; COG: COG0438; UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG complement(4161418..4162539) Pseudomonas stutzeri A1501 5096808 YP_001174313.1 CDS waaC NC_009434.1 4162646 4163488 R Code: M; COG: COG0859; heptosyltransferase I complement(4162646..4163488) Pseudomonas stutzeri A1501 5096809 YP_001174314.1 CDS waaF NC_009434.1 4163648 4164745 R Code: M; COG: COG0859; heptosyltransferase II complement(4163648..4164745) Pseudomonas stutzeri A1501 5096810 YP_001174315.1 CDS ilvE NC_009434.1 4164800 4165723 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(4164800..4165723) Pseudomonas stutzeri A1501 5096811 YP_001174316.1 CDS glnE NC_009434.1 4165773 4168718 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(4165773..4168718) Pseudomonas stutzeri A1501 5096812 YP_001174317.1 CDS aceE NC_009434.1 4168990 4171635 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 4168990..4171635 Pseudomonas stutzeri A1501 5096813 YP_001174318.1 CDS aceF NC_009434.1 4171663 4173327 D Code: C; COG: COG0508; dihydrolipoamide acetyltransferase 4171663..4173327 Pseudomonas stutzeri A1501 5096814 YP_001174319.1 CDS PST_3854 NC_009434.1 4173448 4173975 R hypothetical protein complement(4173448..4173975) Pseudomonas stutzeri A1501 5096815 YP_001174320.1 CDS PST_3855 NC_009434.1 4174086 4176758 D sensory box protein 4174086..4176758 Pseudomonas stutzeri A1501 5096816 YP_001174321.1 CDS msrA NC_009434.1 4176771 4177508 D Code: O; COG: COG0225; peptide methionine sulfoxide reductase 4176771..4177508 Pseudomonas stutzeri A1501 5096817 YP_001174322.1 CDS PST_3857 NC_009434.1 4177524 4177628 R hypothetical protein complement(4177524..4177628) Pseudomonas stutzeri A1501 5096818 YP_001174323.1 CDS PST_3858 NC_009434.1 4177916 4179694 R Code: I; COG: COG1960; acyl-CoA dehydrogenase complement(4177916..4179694) Pseudomonas stutzeri A1501 5096819 YP_001174324.1 CDS PST_3859 NC_009434.1 4179833 4181035 R Code: T; COG: COG2199; diguanylate cyclase complement(4179833..4181035) Pseudomonas stutzeri A1501 5096820 YP_001174325.1 CDS PST_3860 NC_009434.1 4181280 4183139 R Code: I; COG: COG1960; acyl-CoA dehydrogenase complement(4181280..4183139) Pseudomonas stutzeri A1501 5096821 YP_001174326.1 CDS PST_3861 NC_009434.1 4183453 4183701 R hypothetical protein complement(4183453..4183701) Pseudomonas stutzeri A1501 5096822 YP_001174327.1 CDS bioD NC_009434.1 4183766 4184500 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(4183766..4184500) Pseudomonas stutzeri A1501 5096823 YP_001174328.1 CDS bioC NC_009434.1 4184475 4185272 R Code: QR; COG: COG0500; biotin synthesis protein BioC complement(4184475..4185272) Pseudomonas stutzeri A1501 5096824 YP_001174329.1 CDS bioH NC_009434.1 4185265 4185990 R Code: R; COG: COG0596; bioH protein complement(4185265..4185990) Pseudomonas stutzeri A1501 5096825 YP_001174330.1 CDS bioF NC_009434.1 4185983 4187161 R catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase complement(4185983..4187161) Pseudomonas stutzeri A1501 5096826 YP_001174331.1 CDS bioB NC_009434.1 4187268 4188323 R Code: H; COG: COG0502; biotin synthase complement(4187268..4188323) Pseudomonas stutzeri A1501 5096827 YP_001174332.1 CDS PST_3867 NC_009434.1 4188417 4189121 D Code: R; COG: COG1040; phosphoribosyl transferase 4188417..4189121 Pseudomonas stutzeri A1501 5096828 YP_001174333.1 CDS PST_3868 NC_009434.1 4189176 4190150 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 4189176..4190150 Pseudomonas stutzeri A1501 5096829 YP_001174334.1 CDS PST_3869 NC_009434.1 4190219 4191058 R Code: R; COG: COG2961; protein involved in catabolism of external DNA complement(4190219..4191058) Pseudomonas stutzeri A1501 5096830 YP_001174335.1 CDS PST_3870 NC_009434.1 4191193 4192236 D Code: R; COG: COG2070; 2-nitropropane dioxygenase 4191193..4192236 Pseudomonas stutzeri A1501 5096831 YP_001174336.1 CDS crtZ NC_009434.1 4192319 4192852 D beta-carotene hydroxylase 4192319..4192852 Pseudomonas stutzeri A1501 5096832 YP_001174337.1 CDS PST_3872 NC_009434.1 4192812 4193738 R Code: I; COG: COG1562; phytoene synthase complement(4192812..4193738) Pseudomonas stutzeri A1501 5096833 YP_001174338.1 CDS PST_3873 NC_009434.1 4193735 4195252 R Code: Q; COG: COG1233; phytoene desaturase complement(4193735..4195252) Pseudomonas stutzeri A1501 5096834 YP_001174339.1 CDS PST_3874 NC_009434.1 4195249 4196415 R lycopene cyclase complement(4195249..4196415) Pseudomonas stutzeri A1501 5096835 YP_001174340.1 CDS PST_3875 NC_009434.1 4196405 4197691 R Code: GC; COG: COG1819; zeaxanthin glucosyl transferase complement(4196405..4197691) Pseudomonas stutzeri A1501 5096836 YP_001174341.1 CDS PST_3876 NC_009434.1 4197711 4198751 R catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase complement(4197711..4198751) Pseudomonas stutzeri A1501 5096837 YP_001174342.1 CDS PST_3877 NC_009434.1 4198909 4199799 D Code: H; COG: COG0142; geranylgeranyl pyrophosphate synthetase 4198909..4199799 Pseudomonas stutzeri A1501 5096838 YP_001174343.1 CDS PST_3878 NC_009434.1 4199902 4201704 D Code: I; COG: COG1960; acyl-CoA dehydrogenase 4199902..4201704 Pseudomonas stutzeri A1501 5096839 YP_001174344.1 CDS PST_3879 NC_009434.1 4201837 4203582 D the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 4201837..4203582 Pseudomonas stutzeri A1501 5096840 YP_001174345.1 CDS PST_3880 NC_009434.1 4203709 4206999 D small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 4203709..4206999 Pseudomonas stutzeri A1501 5096841 YP_001174346.1 CDS PST_3881 NC_009434.1 4207091 4208551 D Code: S; COG: COG0397; hypothetical protein 4207091..4208551 Pseudomonas stutzeri A1501 5096842 YP_001174347.1 CDS PST_3882 NC_009434.1 4208580 4209770 R Code: T; COG: COG0642; sensor histidine kinase/response regulator complement(4208580..4209770) Pseudomonas stutzeri A1501 5096843 YP_001174348.1 CDS PST_3883 NC_009434.1 4209773 4210276 R Code: NT; COG: COG2201; protein-glutamate methylesterase complement(4209773..4210276) Pseudomonas stutzeri A1501 5096844 YP_001174349.1 CDS PST_3884 NC_009434.1 4210372 4211190 R Code: NT; COG: COG1352; chemotaxis protein methyltransferase CheR complement(4210372..4211190) Pseudomonas stutzeri A1501 5096845 YP_001174350.1 CDS PST_3885 NC_009434.1 4211192 4214704 R sensor histidine kinase/response regulator complement(4211192..4214704) Pseudomonas stutzeri A1501 5096846 YP_001174351.1 CDS PST_3886 NC_009434.1 4214897 4215055 R Code: S; COG: COG0401; stress induced hydrophobic peptide complement(4214897..4215055) Pseudomonas stutzeri A1501 5096847 YP_001174352.1 CDS PST_3887 NC_009434.1 4215457 4216467 D short chain dehydrogenase 4215457..4216467 Pseudomonas stutzeri A1501 5096848 YP_001174353.1 CDS PST_3888 NC_009434.1 4216474 4216671 R hypothetical protein complement(4216474..4216671) Pseudomonas stutzeri A1501 5096849 YP_001174354.1 CDS PST_3889 NC_009434.1 4216671 4217504 R Code: R; COG: COG0491; putative metallo-beta-lactamase complement(4216671..4217504) Pseudomonas stutzeri A1501 5096850 YP_001174355.1 CDS PST_3890 NC_009434.1 4217694 4219070 D Code: O; COG: COG1030; hypothetical protein 4217694..4219070 Pseudomonas stutzeri A1501 5096851 YP_001174356.1 CDS PST_3891 NC_009434.1 4219060 4219818 D Code: O; COG: COG0330; stomatin-like protein 4219060..4219818 Pseudomonas stutzeri A1501 5096852 YP_001174357.1 CDS PST_3892 NC_009434.1 4219819 4220331 D putative lipoprotein 4219819..4220331 Pseudomonas stutzeri A1501 5096853 YP_001174358.1 CDS PST_3893 NC_009434.1 4220439 4221347 D hypothetical protein 4220439..4221347 Pseudomonas stutzeri A1501 5096854 YP_001174359.1 CDS treA NC_009434.1 4221344 4223014 R Code: G; COG: COG1626; periplasmic trehalase complement(4221344..4223014) Pseudomonas stutzeri A1501 5096855 YP_001174360.1 CDS PST_3895 NC_009434.1 4222993 4223760 R Code: IQR; COG: COG1028; short chain dehydrogenase/reductase family oxidoreductase complement(4222993..4223760) Pseudomonas stutzeri A1501 5096856 YP_001174361.1 CDS rarD-1 NC_009434.1 4223965 4224855 D Code: R; COG: COG2962; RarD protein 4223965..4224855 Pseudomonas stutzeri A1501 5096857 YP_001174362.1 CDS PST_3897 NC_009434.1 4224859 4225383 R Code: E; COG: COG2716; glycine cleavage system regulatory protein complement(4224859..4225383) Pseudomonas stutzeri A1501 5096858 YP_001174363.1 CDS PST_3898 NC_009434.1 4225614 4227794 D catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 4225614..4227794 Pseudomonas stutzeri A1501 5096859 YP_001174364.1 CDS PST_3899 NC_009434.1 4227952 4229910 D nucleotidyltransferase 4227952..4229910 Pseudomonas stutzeri A1501 5096860 YP_001174365.1 CDS PST_3900 NC_009434.1 4229907 4230614 D Code: L; COG: COG0847; exonuclease 4229907..4230614 Pseudomonas stutzeri A1501 5096861 YP_001174366.1 CDS PST_3901 NC_009434.1 4230759 4231277 R hypothetical protein complement(4230759..4231277) Pseudomonas stutzeri A1501 5096862 YP_001174367.1 CDS PST_3902 NC_009434.1 4231375 4233144 R Code: R; COG: COG4147; sodium:solute symporter family protein complement(4231375..4233144) Pseudomonas stutzeri A1501 5096863 YP_001174368.1 CDS PST_3903 NC_009434.1 4233150 4233668 R hypothetical protein complement(4233150..4233668) Pseudomonas stutzeri A1501 5096864 YP_001174369.1 CDS PST_3904 NC_009434.1 4234133 4234642 R Code: O; COG: COG4067; hypothetical protein complement(4234133..4234642) Pseudomonas stutzeri A1501 5096865 YP_001174370.1 CDS dbpA NC_009434.1 4234665 4236203 D exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 4234665..4236203 Pseudomonas stutzeri A1501 5096866 YP_001174371.1 CDS PST_3906 NC_009434.1 4236258 4238516 D Code: S; COG: COG1289; hypothetical protein 4236258..4238516 Pseudomonas stutzeri A1501 5096867 YP_001174372.1 CDS PST_3907 NC_009434.1 4238513 4239241 R amino acid ABC transporter, periplasmic amino acid-binding protein, putative complement(4238513..4239241) Pseudomonas stutzeri A1501 5096868 YP_001174373.1 CDS PST_3908 NC_009434.1 4239415 4240596 D Code: R; COG: COG2081; flavoprotein 4239415..4240596 Pseudomonas stutzeri A1501 5096869 YP_001174374.1 CDS PST_3909 NC_009434.1 4240617 4240799 R hypothetical protein complement(4240617..4240799) Pseudomonas stutzeri A1501 5096870 YP_001174375.1 CDS PST_3910 NC_009434.1 4240856 4241185 R hypothetical protein complement(4240856..4241185) Pseudomonas stutzeri A1501 5096871 YP_001174376.1 CDS PST_3911 NC_009434.1 4241317 4243572 R Code: T; COG: COG5001; putative sensory box/GGDEF family protein complement(4241317..4243572) Pseudomonas stutzeri A1501 5096872 YP_001174377.1 CDS PST_3912 NC_009434.1 4243775 4244248 R hypothetical protein complement(4243775..4244248) Pseudomonas stutzeri A1501 5096873 YP_001174378.1 CDS PST_3913 NC_009434.1 4244339 4244680 R hypothetical protein complement(4244339..4244680) Pseudomonas stutzeri A1501 5096874 YP_001174379.1 CDS PST_3914 NC_009434.1 4244789 4245412 R Code: QR; COG: COG0500; ubiquinone/menaquinone biosynthesis methyltransferase complement(4244789..4245412) Pseudomonas stutzeri A1501 5096875 YP_001174380.1 CDS PST_3915 NC_009434.1 4245685 4246065 D Code: T; COG: COG0784; response regulator 4245685..4246065 Pseudomonas stutzeri A1501 5096876 YP_001174381.1 CDS fda NC_009434.1 4246127 4247191 R class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase complement(4246127..4247191) Pseudomonas stutzeri A1501 5096877 YP_001174382.1 CDS PST_3917 NC_009434.1 4247373 4247708 R putative lipoprotein complement(4247373..4247708) Pseudomonas stutzeri A1501 5096878 YP_001174383.1 CDS pgk NC_009434.1 4248036 4249289 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(4248036..4249289) Pseudomonas stutzeri A1501 5096879 YP_001174384.1 CDS epd NC_009434.1 4249246 4250292 R Code: G; COG: COG0057; D-erythrose-4-phosphate dehydrogenase complement(4249246..4250292) Pseudomonas stutzeri A1501 5096880 YP_001174385.1 CDS tktA NC_009434.1 4250398 4252395 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(4250398..4252395) Pseudomonas stutzeri A1501 5096881 YP_001174386.1 CDS PST_3921 NC_009434.1 4252492 4253430 R Code: K; COG: COG0583; LysR family transcriptional regulator complement(4252492..4253430) Pseudomonas stutzeri A1501 5096882 YP_001174387.1 CDS PST_3922 NC_009434.1 4253440 4253553 R hypothetical protein complement(4253440..4253553) Pseudomonas stutzeri A1501 5096883 YP_001174388.1 CDS PST_3923 NC_009434.1 4253574 4254455 D non-heme iron hydroxylase MppO 4253574..4254455 Pseudomonas stutzeri A1501 5096884 YP_001174389.1 CDS PST_3924 NC_009434.1 4254452 4255054 D amino acid transporter LysE 4254452..4255054 Pseudomonas stutzeri A1501 5096885 YP_001174390.1 CDS PST_3925 NC_009434.1 4255137 4256138 D Code: QR; COG: COG0500; transcriptional regulator 4255137..4256138 Pseudomonas stutzeri A1501 5096886 YP_001174391.1 CDS metK NC_009434.1 4256153 4257343 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 4256153..4257343 Pseudomonas stutzeri A1501 5096887 YP_001174392.1 CDS PST_3927 NC_009434.1 4257561 4257896 D hypothetical protein 4257561..4257896 Pseudomonas stutzeri A1501 5096888 YP_001174393.1 CDS PST_3928 NC_009434.1 4257952 4258713 R Code: V; COG: COG0842; ABC transporter permease complement(4257952..4258713) Pseudomonas stutzeri A1501 5096889 YP_001174394.1 CDS PST_3929 NC_009434.1 4258726 4259751 R Code: V; COG: COG1131; ABC transporter ATP-binding protein complement(4258726..4259751) Pseudomonas stutzeri A1501 5096890 YP_001174395.1 CDS PST_3930 NC_009434.1 4259825 4261156 D Code: P; COG: COG4097; putative flavocytochrome 4259825..4261156 Pseudomonas stutzeri A1501 5096891 YP_001174396.1 CDS ligB NC_009434.1 4261120 4262913 D this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB 4261120..4262913 Pseudomonas stutzeri A1501 5096892 YP_001174397.1 CDS PST_3932 NC_009434.1 4262974 4263354 D hypothetical protein 4262974..4263354 Pseudomonas stutzeri A1501 5096893 YP_001174398.1 CDS PST_3933 NC_009434.1 4263361 4263810 R Code: C; COG: COG3909; cytochrome c, class II complement(4263361..4263810) Pseudomonas stutzeri A1501 5096894 YP_001174399.1 CDS PST_3934 NC_009434.1 4263915 4264352 R hypothetical protein complement(4263915..4264352) Pseudomonas stutzeri A1501 5096895 YP_001174400.1 CDS sahH NC_009434.1 4264630 4266036 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 4264630..4266036 Pseudomonas stutzeri A1501 5096896 YP_001174401.1 CDS metF NC_009434.1 4266110 4266961 D Code: E; COG: COG0685; 5,10-methylenetetrahydrofolate reductase 4266110..4266961 Pseudomonas stutzeri A1501 5096897 YP_001174402.1 CDS PST_3937 NC_009434.1 4267193 4269022 D Code: LKJ; COG: COG0513; DEAD/DEAH box helicase 4267193..4269022 Pseudomonas stutzeri A1501 5096898 YP_001174403.1 CDS oprM NC_009434.1 4269114 4270535 R Code: MU; COG: COG1538; outer membrane protein OprM precursor complement(4269114..4270535) Pseudomonas stutzeri A1501 5096899 YP_001174404.1 CDS ttgB NC_009434.1 4270532 4273669 R Code: V; COG: COG0841; multidrug/solvent RND transporter TtgB complement(4270532..4273669) Pseudomonas stutzeri A1501 5096900 YP_001174405.1 CDS ttgA NC_009434.1 4273684 4274823 R Code: M; COG: COG0845; multidrug/solvent RND membrane fusion protein complement(4273684..4274823) Pseudomonas stutzeri A1501 5096901 YP_001174406.1 CDS PST_3941 NC_009434.1 4275070 4275645 R Code: S; COG: COG2353; YceI-like family protein complement(4275070..4275645) Pseudomonas stutzeri A1501 5096902 YP_001174407.1 CDS PST_3942 NC_009434.1 4275669 4276223 R Code: C; COG: COG3038; cytochrome b561 complement(4275669..4276223) Pseudomonas stutzeri A1501 5096903 YP_001174408.1 CDS PST_3943 NC_009434.1 4276249 4276437 R hypothetical protein complement(4276249..4276437) Pseudomonas stutzeri A1501 5096904 YP_001174409.1 CDS bioA NC_009434.1 4276543 4277793 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 4276543..4277793 Pseudomonas stutzeri A1501 5096905 YP_001174410.1 CDS PST_3945 NC_009434.1 4277880 4278596 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 4277880..4278596 Pseudomonas stutzeri A1501 5096906 YP_001174411.1 CDS PST_3946 NC_009434.1 4278610 4279080 R chemotaxis protein complement(4278610..4279080) Pseudomonas stutzeri A1501 5096907 YP_001174412.1 CDS PST_3947 NC_009434.1 4279077 4280129 R Code: NT; COG: COG2201; methylesterase complement(4279077..4280129) Pseudomonas stutzeri A1501 5096908 YP_001174413.1 CDS PST_3948 NC_009434.1 4280122 4287456 R component of chemotactic signal transduction system complement(4280122..4287456) Pseudomonas stutzeri A1501 5096909 YP_001174414.1 CDS pilK NC_009434.1 4287468 4288334 R Code: NT; COG: COG1352; methyltransferase PilK complement(4287468..4288334) Pseudomonas stutzeri A1501 5096910 YP_001174415.1 CDS pilJ NC_009434.1 4288395 4290443 R Code: NT; COG: COG0840; twitching motility protein PilJ complement(4288395..4290443) Pseudomonas stutzeri A1501 5096911 YP_001174416.1 CDS pilI NC_009434.1 4290522 4291049 R Code: NT; COG: COG0835; twitching motility protein PilI complement(4290522..4291049) Pseudomonas stutzeri A1501 5096912 YP_001174417.1 CDS pilH NC_009434.1 4291100 4291465 R Code: T; COG: COG0784; type IV pilus response regulator PilH complement(4291100..4291465) Pseudomonas stutzeri A1501 5096913 YP_001174418.1 CDS pilG NC_009434.1 4291510 4291887 R Code: T; COG: COG0784; twitching motility protein PilG complement(4291510..4291887) Pseudomonas stutzeri A1501 5096914 YP_001174419.1 CDS gshB NC_009434.1 4292154 4293104 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 4292154..4293104 Pseudomonas stutzeri A1501 5096915 YP_001174420.1 CDS PST_3955 NC_009434.1 4293132 4294085 D Code: M; COG: COG0810; TonB domain-containing protein 4293132..4294085 Pseudomonas stutzeri A1501 5096916 YP_001174421.1 CDS algH NC_009434.1 4294151 4294720 D Code: K; COG: COG1678; hypothetical protein 4294151..4294720 Pseudomonas stutzeri A1501 5096917 YP_001174422.1 CDS PST_3957 NC_009434.1 4294717 4295145 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 4294717..4295145 Pseudomonas stutzeri A1501 5096918 YP_001174423.1 CDS pyrR NC_009434.1 4295163 4295678 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 4295163..4295678 Pseudomonas stutzeri A1501 5096919 YP_001174424.1 CDS pyrB NC_009434.1 4295732 4296748 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 4295732..4296748 Pseudomonas stutzeri A1501 5096920 YP_001174425.1 CDS pyrC NC_009434.1 4296748 4298022 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 4296748..4298022 Pseudomonas stutzeri A1501 5096921 YP_001174426.1 CDS PST_3961 NC_009434.1 4298080 4298475 R hypothetical protein complement(4298080..4298475) Pseudomonas stutzeri A1501 5096922 YP_001174427.1 CDS PST_3962 NC_009434.1 4298584 4299825 D Code: R; COG: COG4277; elongator protein 4298584..4299825 Pseudomonas stutzeri A1501 5096923 YP_001174428.1 CDS PST_3963 NC_009434.1 4299825 4300658 D leucyl-tRNA synthetase 4299825..4300658 Pseudomonas stutzeri A1501 5096924 YP_001174429.1 CDS pilU NC_009434.1 4300655 4301719 R Code: NU; COG: COG5008; twitching motility protein PilU complement(4300655..4301719) Pseudomonas stutzeri A1501 5096925 YP_001174430.1 CDS pilT NC_009434.1 4301860 4302894 R Code: NU; COG: COG2805; twitching motility protein PilT complement(4301860..4302894) Pseudomonas stutzeri A1501 5096926 YP_001174431.1 CDS PST_3966 NC_009434.1 4302961 4303650 D Code: R; COG: COG0325; TIM-barrel fold family protein 4302961..4303650 Pseudomonas stutzeri A1501 5096927 YP_001174432.1 CDS proC NC_009434.1 4303700 4304485 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 4303700..4304485 Pseudomonas stutzeri A1501 5096928 YP_001174433.1 CDS PST_3968 NC_009434.1 4304495 4305085 D Code: S; COG: COG0762; hypothetical protein 4304495..4305085 Pseudomonas stutzeri A1501 5096929 YP_001174434.1 CDS PST_3969 NC_009434.1 4305361 4307322 D Code: R; COG: COG0699; GTPase 4305361..4307322 Pseudomonas stutzeri A1501 5096930 YP_001174435.1 CDS metX NC_009434.1 4307453 4308592 D Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 4307453..4308592 Pseudomonas stutzeri A1501 5096931 YP_001174436.1 CDS metW NC_009434.1 4308602 4309201 D Code: QR; COG: COG0500; methionine biosynthesis protein MetW 4308602..4309201 Pseudomonas stutzeri A1501 5096932 YP_001174437.1 CDS PST_3972 NC_009434.1 4309226 4309648 D hypothetical protein 4309226..4309648 Pseudomonas stutzeri A1501 5096933 YP_001174438.1 CDS PST_3973 NC_009434.1 4309645 4310238 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 4309645..4310238 Pseudomonas stutzeri A1501 5096934 YP_001174439.1 CDS PST_3974 NC_009434.1 4310235 4311413 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4310235..4311413 Pseudomonas stutzeri A1501 5096935 YP_001174440.1 CDS PST_3975 NC_009434.1 4311423 4311746 D major facilitator superfamily permease 4311423..4311746 Pseudomonas stutzeri A1501 5096936 YP_001174441.1 CDS PST_3976 NC_009434.1 4311753 4312115 R hypothetical protein complement(4311753..4312115) Pseudomonas stutzeri A1501 5096937 YP_001174442.1 CDS arcD-2 NC_009434.1 4312304 4313731 D Code: E; COG: COG0531; arginine/ornithine antiporter 4312304..4313731 Pseudomonas stutzeri A1501 5096938 YP_001174443.1 CDS arcA-2 NC_009434.1 4313823 4315079 D catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 4313823..4315079 Pseudomonas stutzeri A1501 5096939 YP_001174444.1 CDS arcB-2 NC_009434.1 4315131 4316141 D catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 4315131..4316141 Pseudomonas stutzeri A1501 5096940 YP_001174445.1 CDS arcC-2 NC_009434.1 4316182 4317111 D reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 4316182..4317111 Pseudomonas stutzeri A1501 5096941 YP_001174446.1 CDS PST_3981 NC_009434.1 4317158 4318495 R hypothetical protein complement(4317158..4318495) Pseudomonas stutzeri A1501 5096942 YP_001174447.1 CDS trmB NC_009434.1 4318712 4319428 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(4318712..4319428) Pseudomonas stutzeri A1501 5096943 YP_001174448.1 CDS thiG NC_009434.1 4319494 4320288 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(4319494..4320288) Pseudomonas stutzeri A1501 5096944 YP_001174449.1 CDS thiS NC_009434.1 4320365 4320622 R Code: H; COG: COG2104; thiamine biosynthesis protein ThiS complement(4320365..4320622) Pseudomonas stutzeri A1501 5096945 YP_001174450.1 CDS PST_3985 NC_009434.1 4320653 4321027 R Code: S; COG: COG2363; hypothetical protein complement(4320653..4321027) Pseudomonas stutzeri A1501 5096946 YP_001174451.1 CDS mtgA NC_009434.1 4321095 4321823 D glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 4321095..4321823 Pseudomonas stutzeri A1501 5096947 YP_001174452.1 CDS PST_3987 NC_009434.1 4321948 4323876 D sensory box protein 4321948..4323876 Pseudomonas stutzeri A1501 5096948 YP_001174453.1 CDS PST_3988 NC_009434.1 4324225 4326618 D hypothetical protein 4324225..4326618 Pseudomonas stutzeri A1501 5096949 YP_001174454.1 CDS rpoH NC_009434.1 4326695 4327549 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(4326695..4327549) Pseudomonas stutzeri A1501 5096950 YP_001174455.1 CDS ftsX NC_009434.1 4327662 4328681 R Code: D; COG: COG2177; cell division ABC efflux transporter, permease FtsX complement(4327662..4328681) Pseudomonas stutzeri A1501 5096951 YP_001174456.1 CDS ftsE NC_009434.1 4328681 4329349 R Code: D; COG: COG2884; cell division ATP-binding protein FtsE complement(4328681..4329349) Pseudomonas stutzeri A1501 5096952 YP_001174457.1 CDS ftsY NC_009434.1 4329346 4330779 R Code: U; COG: COG0552; signal recognition particle receptor FtsY complement(4329346..4330779) Pseudomonas stutzeri A1501 5096953 YP_001174458.1 CDS PST_3993 NC_009434.1 4330848 4332200 D Code: R; COG: COG0612; zinc protease 4330848..4332200 Pseudomonas stutzeri A1501 5096954 YP_001174459.1 CDS PST_3994 NC_009434.1 4332169 4333734 D Code: R; COG: COG0612; Zn-dependent peptidase 4332169..4333734 Pseudomonas stutzeri A1501 5096955 YP_001174460.1 CDS PST_3995 NC_009434.1 4333734 4334351 D Code: L; COG: COG0742; methyltransferase 4333734..4334351 Pseudomonas stutzeri A1501 5096956 YP_001174461.1 CDS PST_3997 NC_009434.1 4334345 4334809 R ribonucleotide reductase, alpha subunit complement(4334345..4334809) Pseudomonas stutzeri A1501 5096957 YP_001174462.1 CDS PST_3996 NC_009434.1 4334762 4335958 D Code: R; COG: COG0429; alpha/beta fold family hydrolase 4334762..4335958 Pseudomonas stutzeri A1501 5098757 YP_001174463.1 CDS PST_3998 NC_009434.1 4335910 4336644 R Code: K; COG: COG1309; transcriptional regulator complement(4335910..4336644) Pseudomonas stutzeri A1501 5098758 YP_001174464.1 CDS PST_3999 NC_009434.1 4336747 4338126 D Code: C; COG: COG1012; aldehyde dehydrogenase 4336747..4338126 Pseudomonas stutzeri A1501 5096958 YP_001174465.1 CDS PST_4000 NC_009434.1 4338090 4338671 D hypothetical protein 4338090..4338671 Pseudomonas stutzeri A1501 5096959 YP_001174466.1 CDS PST_4001 NC_009434.1 4338686 4340281 D Code: E; COG: COG2303; oxidoreductase 4338686..4340281 Pseudomonas stutzeri A1501 5096960 YP_001174467.1 CDS coaD NC_009434.1 4340259 4340870 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 4340259..4340870 Pseudomonas stutzeri A1501 5096961 YP_001174468.1 CDS fdx1 NC_009434.1 4340978 4341229 D Code: C; COG: COG1145; ferredoxin 4340978..4341229 Pseudomonas stutzeri A1501 5096962 YP_001174469.1 CDS PST_4004 NC_009434.1 4341229 4342962 D Code: E; COG: COG0405; gamma-glutamyltranspeptidase 4341229..4342962 Pseudomonas stutzeri A1501 5096963 YP_001174470.1 CDS PST_4005 NC_009434.1 4342946 4344736 R Code: P; COG: COG1283; Na+/phosphate symporter complement(4342946..4344736) Pseudomonas stutzeri A1501 5096964 YP_001174471.1 CDS PST_4006 NC_009434.1 4344885 4345259 R cation/multidrug efflux pump complement(4344885..4345259) Pseudomonas stutzeri A1501 5096965 YP_001174472.1 CDS mutM NC_009434.1 4345341 4346153 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(4345341..4346153) Pseudomonas stutzeri A1501 5096966 YP_001174473.1 CDS PST_4008 NC_009434.1 4346210 4347157 R Code: T; COG: COG1639; signal transduction protein complement(4346210..4347157) Pseudomonas stutzeri A1501 5096967 YP_001174474.1 CDS pfpI NC_009434.1 4347207 4347746 D Code: R; COG: COG0693; protease PfpI 4347207..4347746 Pseudomonas stutzeri A1501 5096968 YP_001174475.1 CDS PST_4010 NC_009434.1 4347849 4349045 D Code: R; COG: COG1092; hypothetical protein 4347849..4349045 Pseudomonas stutzeri A1501 5096969 YP_001174476.1 CDS PST_4011 NC_009434.1 4349096 4349944 R lipase complement(4349096..4349944) Pseudomonas stutzeri A1501 5096970 YP_001174477.1 CDS ilvD NC_009434.1 4350453 4352291 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 4350453..4352291 Pseudomonas stutzeri A1501 5096971 YP_001174478.1 CDS PST_4013 NC_009434.1 4352349 4354229 R hypothetical protein complement(4352349..4354229) Pseudomonas stutzeri A1501 5096972 YP_001174479.1 CDS PST_4014 NC_009434.1 4354180 4355301 R Code: R; COG: COG0579; oxidoreductase, FAD-binding family protein complement(4354180..4355301) Pseudomonas stutzeri A1501 5096973 YP_001174480.1 CDS PST_4015 NC_009434.1 4355399 4355854 D Code: R; COG: COG0622; phosphoesterase 4355399..4355854 Pseudomonas stutzeri A1501 5096974 YP_001174481.1 CDS PST_4016 NC_009434.1 4355847 4356494 R Code: S; COG: COG1284; hypothetical protein complement(4355847..4356494) Pseudomonas stutzeri A1501 5096975 YP_001174482.1 CDS folA NC_009434.1 4356582 4357322 R Code: H; COG: COG0262; dihydrofolate reductase complement(4356582..4357322) Pseudomonas stutzeri A1501 5096976 YP_001174483.1 CDS glpQ NC_009434.1 4357336 4358397 D Code: C; COG: COG0584; glycerophosphoryl diester phosphodiesterase, periplasmic 4357336..4358397 Pseudomonas stutzeri A1501 5096977 YP_001174484.1 CDS PST_4019 NC_009434.1 4358490 4359884 D hypothetical protein 4358490..4359884 Pseudomonas stutzeri A1501 5096978 YP_001174485.1 CDS PST_4020 NC_009434.1 4359877 4361250 D GTPase SAR1 4359877..4361250 Pseudomonas stutzeri A1501 5096979 YP_001174486.1 CDS PST_4021 NC_009434.1 4361280 4362149 R DMT family permease complement(4361280..4362149) Pseudomonas stutzeri A1501 5096980 YP_001174487.1 CDS PST_4022 NC_009434.1 4362280 4363194 D Code: K; COG: COG0583; transcriptional regulator 4362280..4363194 Pseudomonas stutzeri A1501 5096981 YP_001174488.1 CDS phoU NC_009434.1 4363250 4363894 R Code: P; COG: COG0704; phosphate transport system regulatory protein PhoU complement(4363250..4363894) Pseudomonas stutzeri A1501 5096982 YP_001174489.1 CDS PST_4024 NC_009434.1 4364124 4364951 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(4364124..4364951) Pseudomonas stutzeri A1501 5096983 YP_001174490.1 CDS PST_4025 NC_009434.1 4365049 4366719 R membrane protein component of ABC phosphate transporter complement(4365049..4366719) Pseudomonas stutzeri A1501 5096984 YP_001174491.1 CDS PST_4026 NC_009434.1 4366747 4369023 R Code: R; COG: COG4590; membrane protein component of ABC phosphate transporter complement(4366747..4369023) Pseudomonas stutzeri A1501 5096985 YP_001174492.1 CDS PST_4027 NC_009434.1 4369185 4370150 R Code: P; COG: COG0226; phosphate ABC transporter substrate-binding protein complement(4369185..4370150) Pseudomonas stutzeri A1501 5096986 YP_001174493.1 CDS PST_4028 NC_009434.1 4370263 4370775 D Code: I; COG: COG1607; long-chain acyl-CoA thioester hydrolase family protein 4370263..4370775 Pseudomonas stutzeri A1501 5096987 YP_001174494.1 CDS PST_4029 NC_009434.1 4370786 4371988 R Code: T; COG: COG2199; diguanylate cyclase complement(4370786..4371988) Pseudomonas stutzeri A1501 5096988 YP_001174495.1 CDS PST_4030 NC_009434.1 4372074 4373060 D Code: R; COG: COG0679; hypothetical protein 4372074..4373060 Pseudomonas stutzeri A1501 5096989 YP_001174496.1 CDS PST_4031 NC_009434.1 4373061 4373540 R hypothetical protein complement(4373061..4373540) Pseudomonas stutzeri A1501 5096990 YP_001174497.1 CDS recD NC_009434.1 4373635 4375485 R Code: L; COG: COG0507; exodeoxyribonuclease V subunit alpha complement(4373635..4375485) Pseudomonas stutzeri A1501 5096991 YP_001174498.1 CDS recB NC_009434.1 4375556 4379104 R Code: L; COG: COG1074; exodeoxyribonuclease V subunit beta complement(4375556..4379104) Pseudomonas stutzeri A1501 5096992 YP_001174499.1 CDS recC NC_009434.1 4379768 4383046 R Code: L; COG: COG1330; exodeoxyribonuclease V subunit gamma complement(4379768..4383046) Pseudomonas stutzeri A1501 5096993 YP_001174500.1 CDS PST_4035 NC_009434.1 4383273 4384160 D methyl-accepting chemotaxis protein 4383273..4384160 Pseudomonas stutzeri A1501 5096994 YP_001174501.1 CDS PST_4036 NC_009434.1 4384296 4385975 D Code: P; COG: COG1283; Na/Pi cotransporter family protein 4384296..4385975 Pseudomonas stutzeri A1501 5096995 YP_001174502.1 CDS PST_4037 NC_009434.1 4385972 4386994 R Code: R; COG: COG3180; putative ammonia monooxygenase complement(4385972..4386994) Pseudomonas stutzeri A1501 5096996 YP_001174503.1 CDS PST_4038 NC_009434.1 4386996 4388510 R Code: S; COG: COG3333; tricarboxylate transport protein TctA complement(4386996..4388510) Pseudomonas stutzeri A1501 5096997 YP_001174504.1 CDS PST_4039 NC_009434.1 4388512 4388955 R membrane protein TctB complement(4388512..4388955) Pseudomonas stutzeri A1501 5096998 YP_001174505.1 CDS PST_4040 NC_009434.1 4389034 4390008 R Code: S; COG: COG3181; tricarboxylate transport protein TctC complement(4389034..4390008) Pseudomonas stutzeri A1501 5096999 YP_001174506.1 CDS PST_4041 NC_009434.1 4390036 4391298 R porin complement(4390036..4391298) Pseudomonas stutzeri A1501 5097000 YP_001174507.1 CDS tctD NC_009434.1 4391336 4392151 D Code: TK; COG: COG0745; transcriptional regulatory protein TctD 4391336..4392151 Pseudomonas stutzeri A1501 5097001 YP_001174508.1 CDS PST_4043 NC_009434.1 4392144 4393544 D Code: T; COG: COG0642; sensor histidine kinase TctE 4392144..4393544 Pseudomonas stutzeri A1501 5097002 YP_001174509.1 CDS PST_4044 NC_009434.1 4393525 4395450 R response regulator complement(4393525..4395450) Pseudomonas stutzeri A1501 5097003 YP_001174510.1 CDS PST_4045 NC_009434.1 4395578 4397122 R Code: NT; COG: COG0840; aerotaxis receptor Aer-2 complement(4395578..4397122) Pseudomonas stutzeri A1501 5097004 YP_001174511.1 CDS PST_4046 NC_009434.1 4397310 4397495 R hypothetical protein complement(4397310..4397495) Pseudomonas stutzeri A1501 5097005 YP_001174512.1 CDS aer NC_009434.1 4397770 4399617 R Code: NT; COG: COG0840; aerotaxis receptor Aer complement(4397770..4399617) Pseudomonas stutzeri A1501 5097006 YP_001174513.1 CDS PST_4048 NC_009434.1 4399962 4400927 D Code: R; COG: COG2358; TRAP-type transport system, periplasmic protein 4399962..4400927 Pseudomonas stutzeri A1501 5097007 YP_001174514.1 CDS PST_4049 NC_009434.1 4401045 4403597 D Code: R; COG: COG4666; TRAP-type transport system permease 4401045..4403597 Pseudomonas stutzeri A1501 5097008 YP_001174515.1 CDS PST_4050 NC_009434.1 4403694 4404923 R hypothetical protein complement(4403694..4404923) Pseudomonas stutzeri A1501 5097009 YP_001174516.1 CDS PST_4051 NC_009434.1 4405286 4405813 D hypothetical protein 4405286..4405813 Pseudomonas stutzeri A1501 5097010 YP_001174517.1 CDS PST_4052 NC_009434.1 4406008 4406799 D hypothetical protein 4406008..4406799 Pseudomonas stutzeri A1501 5097011 YP_001174518.1 CDS algB NC_009434.1 4406753 4408099 D Code: T; COG: COG2204; alginate biosynthesis transcriptional regulator AlgB 4406753..4408099 Pseudomonas stutzeri A1501 5097012 YP_001174519.1 CDS PST_4054 NC_009434.1 4408096 4409883 D Code: T; COG: COG0642; sensory box histidine kinase 4408096..4409883 Pseudomonas stutzeri A1501 5097013 YP_001174520.1 CDS PST_4055 NC_009434.1 4409908 4410312 D hypothetical protein 4409908..4410312 Pseudomonas stutzeri A1501 5097014 YP_001174521.1 CDS PST_4056 NC_009434.1 4410315 4411103 R Code: V; COG: COG3023; N-acetylmuramoyl-L-alanine amidase family protein complement(4410315..4411103) Pseudomonas stutzeri A1501 5097015 YP_001174522.1 CDS PST_4057 NC_009434.1 4411235 4413100 R Code: T; COG: COG2199; diguanylate cyclase complement(4411235..4413100) Pseudomonas stutzeri A1501 5097016 YP_001174523.1 CDS PST_4058 NC_009434.1 4413097 4413966 R Code: R; COG: COG3568; endonuclease/exonuclease/phosphatase family protein complement(4413097..4413966) Pseudomonas stutzeri A1501 5097017 YP_001174524.1 CDS dsbA NC_009434.1 4413973 4414602 R Code: OC; COG: COG0526; thiol:disulfide interchange protein DsbA complement(4413973..4414602) Pseudomonas stutzeri A1501 5097018 YP_001174525.1 CDS PST_4060 NC_009434.1 4414785 4415390 R Code: C; COG: COG2863; cytochrome c4 complement(4414785..4415390) Pseudomonas stutzeri A1501 5097019 YP_001174526.1 CDS engB NC_009434.1 4415653 4416336 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 4415653..4416336 Pseudomonas stutzeri A1501 5097020 YP_001174527.1 CDS gcvP-2 NC_009434.1 4416533 4419409 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(4416533..4419409) Pseudomonas stutzeri A1501 5097021 YP_001174528.1 CDS gcvH1 NC_009434.1 4419469 4419858 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(4419469..4419858) Pseudomonas stutzeri A1501 5097022 YP_001174529.1 CDS gcvT NC_009434.1 4419911 4420993 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(4419911..4420993) Pseudomonas stutzeri A1501 5097023 YP_001174530.1 CDS PST_4065 NC_009434.1 4421205 4422821 R Code: P; COG: COG1178; iron ABC transporter permease complement(4421205..4422821) Pseudomonas stutzeri A1501 5097024 YP_001174531.1 CDS PST_4066 NC_009434.1 4422937 4423938 R Code: P; COG: COG1840; iron ABC transporter periplasmic iron-binding protein complement(4422937..4423938) Pseudomonas stutzeri A1501 5097025 YP_001174532.1 CDS ubiF NC_009434.1 4424049 4425269 R catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(4424049..4425269) Pseudomonas stutzeri A1501 5097026 YP_001174533.1 CDS PST_4068 NC_009434.1 4425269 4425793 R translation initiation factor 5A (eIF-5A); translation elongation factor P (EF-P) complement(4425269..4425793) Pseudomonas stutzeri A1501 5097027 YP_001174534.1 CDS ubiH NC_009434.1 4425783 4426961 R Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase complement(4425783..4426961) Pseudomonas stutzeri A1501 5097028 YP_001174535.1 CDS pepP NC_009434.1 4426961 4428247 R Code: E; COG: COG0006; aminopeptidase P complement(4426961..4428247) Pseudomonas stutzeri A1501 5097029 YP_001174536.1 CDS PST_4071 NC_009434.1 4428312 4428881 R the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein complement(4428312..4428881) Pseudomonas stutzeri A1501 5097030 YP_001174537.1 CDS PST_4072 NC_009434.1 4428997 4429206 D chromosome segregation ATPase 4428997..4429206 Pseudomonas stutzeri A1501 5097031 YP_001174538.1 CDS PST_4073 NC_009434.1 4429840 4430445 D Code: H; COG: COG0212; 5-formyltetrahydrofolate cyclo-ligase 4429840..4430445 Pseudomonas stutzeri A1501 5097032 YP_001174539.1 CDS PST_4074 NC_009434.1 4430471 4430623 R hypothetical protein complement(4430471..4430623) Pseudomonas stutzeri A1501 5097033 YP_001174540.1 CDS PST_4075 NC_009434.1 4431271 4431774 R Code: N; COG: COG1580; flagellar basal body-associated protein FliL-like protein complement(4431271..4431774) Pseudomonas stutzeri A1501 5097034 YP_001174541.1 CDS PST_4076 NC_009434.1 4431786 4432871 D Code: CR; COG: COG0604; oxidoreductase 4431786..4432871 Pseudomonas stutzeri A1501 5097035 YP_001174542.1 CDS secB NC_009434.1 4432929 4433423 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(4432929..4433423) Pseudomonas stutzeri A1501 5097036 YP_001174543.1 CDS grx NC_009434.1 4433488 4433742 R Code: O; COG: COG0695; glutaredoxin complement(4433488..4433742) Pseudomonas stutzeri A1501 5097037 YP_001174544.1 CDS PST_4079 NC_009434.1 4433745 4434158 R Code: P; COG: COG0607; rhodanese-like domain-containing protein complement(4433745..4434158) Pseudomonas stutzeri A1501 5097038 YP_001174545.1 CDS gpmA NC_009434.1 4434299 4435846 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 4434299..4435846 Pseudomonas stutzeri A1501 5097039 YP_001174546.1 CDS PST_4081 NC_009434.1 4436152 4437225 D Code: D; COG: COG4942; M24/M37 family peptidase 4436152..4437225 Pseudomonas stutzeri A1501 5097040 YP_001174547.1 CDS PST_4082 NC_009434.1 4437297 4438619 D Code: M; COG: COG0793; carboxyl-terminal protease 4437297..4438619 Pseudomonas stutzeri A1501 5097041 YP_001174548.1 CDS PST_4083 NC_009434.1 4438622 4439413 D Code: S; COG: COG2861; hypothetical protein 4438622..4439413 Pseudomonas stutzeri A1501 5097042 YP_001174549.1 CDS PST_4084 NC_009434.1 4439417 4440163 R Code: ET; COG: COG0834; amino acid ABC transporter periplasmic protein complement(4439417..4440163) Pseudomonas stutzeri A1501 5097043 YP_001174550.1 CDS PST_4085 NC_009434.1 4440207 4440350 R hypothetical protein complement(4440207..4440350) Pseudomonas stutzeri A1501 5097044 YP_001174551.1 CDS PST_4086 NC_009434.1 4440394 4441140 R Code: ET; COG: COG0834; amino acid ABC transporter periplasmic protein complement(4440394..4441140) Pseudomonas stutzeri A1501 5097045 YP_001174552.1 CDS hisF1 NC_009434.1 4441221 4441991 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(4441221..4441991) Pseudomonas stutzeri A1501 5097046 YP_001174553.1 CDS hisA NC_009434.1 4442088 4442831 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(4442088..4442831) Pseudomonas stutzeri A1501 5097047 YP_001174554.1 CDS PST_4089 NC_009434.1 4442868 4443128 R hypothetical protein complement(4442868..4443128) Pseudomonas stutzeri A1501 5097048 YP_001174555.1 CDS hisB NC_009434.1 4443767 4444360 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(4443767..4444360) Pseudomonas stutzeri A1501 5097049 YP_001174556.1 CDS nasR NC_009434.1 4444490 4445791 D nitrate-and nitrite-responsive positive regulator 4444490..4445791 Pseudomonas stutzeri A1501 5097050 YP_001174557.1 CDS nasF NC_009434.1 4446150 4447481 D Code: P; COG: COG0715; nitrate ABC transporter substrate-binding protein 4446150..4447481 Pseudomonas stutzeri A1501 5097051 YP_001174558.1 CDS nasE NC_009434.1 4447586 4448377 D Code: P; COG: COG0600; nitrate ABC transporter permease 4447586..4448377 Pseudomonas stutzeri A1501 5097052 YP_001174559.1 CDS nasD NC_009434.1 4448389 4449171 D Code: P; COG: COG1116; nitrate ABC transporter ATP-binding protein 4448389..4449171 Pseudomonas stutzeri A1501 5097053 YP_001174560.1 CDS PST_4095 NC_009434.1 4449221 4449658 D putative acetyltransferase 4449221..4449658 Pseudomonas stutzeri A1501 5097054 YP_001174561.1 CDS PST_4096 NC_009434.1 4449861 4452083 D Code: M; COG: COG2982; hypothetical protein 4449861..4452083 Pseudomonas stutzeri A1501 5097055 YP_001174562.1 CDS mutY NC_009434.1 4452080 4453147 D Code: L; COG: COG1194; A / G specific adenine glycosylase 4452080..4453147 Pseudomonas stutzeri A1501 5097056 YP_001174563.1 CDS PST_4098 NC_009434.1 4453144 4453416 D Code: CO; COG: COG2924; hypothetical protein 4453144..4453416 Pseudomonas stutzeri A1501 5097057 YP_001174564.1 CDS PST_4100 NC_009434.1 4453760 4454290 D Code: L; COG: COG1525; micrococcal nuclease 4453760..4454290 Pseudomonas stutzeri A1501 5097059 YP_001174565.1 CDS PST_4101 NC_009434.1 4454477 4455220 D amino acid ABC transporter periplasmic protein 4454477..4455220 Pseudomonas stutzeri A1501 5097060 YP_001174566.1 CDS PST_4102 NC_009434.1 4455375 4457429 D Code: M; COG: COG1292; choline transporter 4455375..4457429 Pseudomonas stutzeri A1501 5097061 YP_001174567.1 CDS PST_4103 NC_009434.1 4457483 4458442 D Code: E; COG: COG4598; ABC transporter ATP-binding protein 4457483..4458442 Pseudomonas stutzeri A1501 5097062 YP_001174568.1 CDS PST_4104 NC_009434.1 4458457 4459212 D Code: ET; COG: COG0834; periplasmic binding protein 4458457..4459212 Pseudomonas stutzeri A1501 5097063 YP_001174569.1 CDS PST_4105 NC_009434.1 4459277 4459972 D Code: E; COG: COG4215; amino acid ABC transporter permease 4459277..4459972 Pseudomonas stutzeri A1501 5097064 YP_001174570.1 CDS PST_4106 NC_009434.1 4459969 4460658 D Code: E; COG: COG4160; amino acid ABC transporter permease 4459969..4460658 Pseudomonas stutzeri A1501 5097065 YP_001174571.1 CDS PST_4107 NC_009434.1 4460759 4461661 D Code: G; COG: COG0676; aldose 1-epimerase family protein 4460759..4461661 Pseudomonas stutzeri A1501 5097066 YP_001174572.1 CDS PST_4108 NC_009434.1 4461824 4462048 D hypothetical protein 4461824..4462048 Pseudomonas stutzeri A1501 5097067 YP_001174573.1 CDS PST_4109 NC_009434.1 4462129 4463076 D Code: K; COG: COG0583; malonate utilization transcriptional regulator 4462129..4463076 Pseudomonas stutzeri A1501 5097068 YP_001174574.1 CDS PST_4110 NC_009434.1 4463193 4464452 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(4463193..4464452) Pseudomonas stutzeri A1501 5097069 YP_001174575.1 CDS PST_4111 NC_009434.1 4464840 4466669 R Code: NT; COG: COG0840; chemotaxis transducer complement(4464840..4466669) Pseudomonas stutzeri A1501 5097070 YP_001174576.1 CDS madM NC_009434.1 4466843 4467607 R malonate transporter subunit MadM complement(4466843..4467607) Pseudomonas stutzeri A1501 5097071 YP_001174577.1 CDS madL NC_009434.1 4467613 4468029 R malonate transporter subunit MadL complement(4467613..4468029) Pseudomonas stutzeri A1501 5097072 YP_001174578.1 CDS PST_4114 NC_009434.1 4468157 4469083 R Code: I; COG: COG0331; malonyl CoA-acyl carrier protein transacylase complement(4468157..4469083) Pseudomonas stutzeri A1501 5097073 YP_001174579.1 CDS PST_4115 NC_009434.1 4469080 4469697 R Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase complement(4469080..4469697) Pseudomonas stutzeri A1501 5097074 YP_001174580.1 CDS mdcE NC_009434.1 4469768 4470553 R malonate decarboxylase subunit gamma complement(4469768..4470553) Pseudomonas stutzeri A1501 5097075 YP_001174581.1 CDS mdcD NC_009434.1 4470550 4471416 R The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta complement(4470550..4471416) Pseudomonas stutzeri A1501 5097076 YP_001174582.1 CDS mdcC NC_009434.1 4471409 4471708 R acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta complement(4471409..4471708) Pseudomonas stutzeri A1501 5097077 YP_001174583.1 CDS mdcB NC_009434.1 4471711 4472583 R catalyzes the reversible formation of 2'-(5''-triphosphoribosyl)-3'dephospho-CoA from 3-dephospho-CoA; triphosphoribosyl-dephospho-CoA synthase complement(4471711..4472583) Pseudomonas stutzeri A1501 5097078 YP_001174584.1 CDS mdcA NC_009434.1 4472583 4474250 R malonate decarboxylase subunit alpha complement(4472583..4474250) Pseudomonas stutzeri A1501 5097079 YP_001174585.1 CDS PST_4121 NC_009434.1 4474414 4475283 R Code: R; COG: COG4221; short-chain dehydrogenase complement(4474414..4475283) Pseudomonas stutzeri A1501 5097080 YP_001174586.1 CDS phnN NC_009434.1 4475375 4475929 D Code: P; COG: COG3709; ATP-binding protein PhnN 4475375..4475929 Pseudomonas stutzeri A1501 5097081 YP_001174587.1 CDS PST_4123 NC_009434.1 4476311 4476739 R DNA replication initiation ATPase complement(4476311..4476739) Pseudomonas stutzeri A1501 5097082 YP_001174588.1 CDS PST_4124 NC_009434.1 4477111 4478064 D Code: R; COG: COG2358; periplasmic binding protein 4477111..4478064 Pseudomonas stutzeri A1501 5097083 YP_001174589.1 CDS PST_4125 NC_009434.1 4478201 4480225 D Code: R; COG: COG4666; transporter 4478201..4480225 Pseudomonas stutzeri A1501 5097084 YP_001174590.1 CDS PST_4126 NC_009434.1 4480255 4480629 D Code: S; COG: COG4729; hypothetical protein 4480255..4480629 Pseudomonas stutzeri A1501 5097085 YP_001174591.1 CDS PST_4127 NC_009434.1 4480648 4480785 D hypothetical protein 4480648..4480785 Pseudomonas stutzeri A1501 5097086 YP_001174592.1 CDS PST_4128 NC_009434.1 4481651 4482370 R hypothetical protein complement(4481651..4482370) Pseudomonas stutzeri A1501 5097087 YP_001174593.1 CDS PST_4129 NC_009434.1 4482381 4483550 R hypothetical protein complement(4482381..4483550) Pseudomonas stutzeri A1501 5097088 YP_001174594.1 CDS PST_4131 NC_009434.1 4483761 4484963 R Code: R; COG: COG4324; aminopeptidase complement(4483761..4484963) Pseudomonas stutzeri A1501 5097089 YP_001174595.1 CDS PST_4130 NC_009434.1 4484962 4485387 D putative lipoprotein 4484962..4485387 Pseudomonas stutzeri A1501 5097090 YP_001174596.1 CDS PST_4132 NC_009434.1 4485481 4485897 D putative lipoprotein 4485481..4485897 Pseudomonas stutzeri A1501 5097091 YP_001174597.1 CDS PST_4133 NC_009434.1 4486094 4486936 D Code: C; COG: COG2141; luciferase 4486094..4486936 Pseudomonas stutzeri A1501 5097092 YP_001174598.1 CDS PST_4134 NC_009434.1 4487063 4488436 D Code: P; COG: COG0025; sodium/hydrogen exchanger family protein 4487063..4488436 Pseudomonas stutzeri A1501 5097093 YP_001174599.1 CDS PST_4135 NC_009434.1 4488488 4488703 R Code: S; COG: COG3360; hypothetical protein complement(4488488..4488703) Pseudomonas stutzeri A1501 5097094 YP_001174600.1 CDS PST_4136 NC_009434.1 4488958 4489800 D Code: O; COG: COG0625; glutathione S-transferase family protein 4488958..4489800 Pseudomonas stutzeri A1501 5097095 YP_001174601.1 CDS PST_4137 NC_009434.1 4490102 4490866 D hypothetical protein 4490102..4490866 Pseudomonas stutzeri A1501 5097096 YP_001174602.1 CDS PST_4138 NC_009434.1 4491045 4491437 D hypothetical protein 4491045..4491437 Pseudomonas stutzeri A1501 5097097 YP_001174603.1 CDS PST_4139 NC_009434.1 4491496 4491999 R hypothetical protein complement(4491496..4491999) Pseudomonas stutzeri A1501 5097098 YP_001174604.1 CDS ushA NC_009434.1 4492226 4494043 D Code: F; COG: COG0737; 5'-nucleotidase 4492226..4494043 Pseudomonas stutzeri A1501 5097099 YP_001174605.1 CDS PST_4141 NC_009434.1 4494167 4494706 R hypothetical protein complement(4494167..4494706) Pseudomonas stutzeri A1501 5097100 YP_001174606.1 CDS PST_4142 NC_009434.1 4494679 4495119 R acetyltransferase complement(4494679..4495119) Pseudomonas stutzeri A1501 5097101 YP_001174607.1 CDS PST_4143 NC_009434.1 4495116 4495736 R Code: E; COG: COG3340; S51 family peptidase complement(4495116..4495736) Pseudomonas stutzeri A1501 5097102 YP_001174608.1 CDS PST_4144 NC_009434.1 4495886 4497721 R Code: V; COG: COG1132; ABC transporter ATP-binding protein/permease complement(4495886..4497721) Pseudomonas stutzeri A1501 5097103 YP_001174609.1 CDS PST_4145 NC_009434.1 4498144 4499436 D Code: R; COG: COG1752; alpha-beta hydrolase family esterase 4498144..4499436 Pseudomonas stutzeri A1501 5097104 YP_001174610.1 CDS PST_4146 NC_009434.1 4499589 4500047 R Code: S; COG: COG3812; hypothetical protein complement(4499589..4500047) Pseudomonas stutzeri A1501 5097105 YP_001174611.1 CDS PST_4147 NC_009434.1 4500270 4500716 R hypothetical protein complement(4500270..4500716) Pseudomonas stutzeri A1501 5097106 YP_001174612.1 CDS PST_4148 NC_009434.1 4501006 4501545 D hypothetical protein 4501006..4501545 Pseudomonas stutzeri A1501 5097107 YP_001174613.1 CDS PST_4149 NC_009434.1 4501658 4502575 D Code: K; COG: COG0583; transcriptional regulator 4501658..4502575 Pseudomonas stutzeri A1501 5097108 YP_001174614.1 CDS PST_4150 NC_009434.1 4502784 4503869 R hypothetical protein complement(4502784..4503869) Pseudomonas stutzeri A1501 5097109 YP_001174615.1 CDS PST_4151 NC_009434.1 4504054 4504251 R hypothetical protein complement(4504054..4504251) Pseudomonas stutzeri A1501 5097110 YP_001174616.1 CDS pgm NC_009434.1 4504504 4506168 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 4504504..4506168 Pseudomonas stutzeri A1501 5097111 YP_001174617.1 CDS adhA NC_009434.1 4506476 4507459 R Code: R; COG: COG1064; alcohol dehydrogenase complement(4506476..4507459) Pseudomonas stutzeri A1501 5097112 YP_001174618.1 CDS PST_4154 NC_009434.1 4507636 4508061 D Code: R; COG: COG3565; ring-cleaving dioxygenase 4507636..4508061 Pseudomonas stutzeri A1501 5097113 YP_001174619.1 CDS PST_4155 NC_009434.1 4508068 4508556 R Code: R; COG: COG0663; anhydrase family 3 protein complement(4508068..4508556) Pseudomonas stutzeri A1501 5097114 YP_001174620.1 CDS prlC NC_009434.1 4508659 4510881 D Code: E; COG: COG0339; oligopeptidase A 4508659..4510881 Pseudomonas stutzeri A1501 5097115 YP_001174621.1 CDS PST_4157 NC_009434.1 4511160 4511927 D hypothetical protein 4511160..4511927 Pseudomonas stutzeri A1501 5097116 YP_001174622.1 CDS PST_4158 NC_009434.1 4512063 4513133 R Code: I; COG: COG1835; sugar acetylase complement(4512063..4513133) Pseudomonas stutzeri A1501 5097117 YP_001174623.1 CDS PST_4159 NC_009434.1 4513182 4514495 D Code: L; COG: COG1533; radical SAM domain-containing protein 4513182..4514495 Pseudomonas stutzeri A1501 5097118 YP_001174624.1 CDS PST_4160 NC_009434.1 4514696 4515448 D Code: P; COG: COG0288; carbonic anhydrase 4514696..4515448 Pseudomonas stutzeri A1501 5097119 YP_001174625.1 CDS PST_4161 NC_009434.1 4515524 4517062 D Code: P; COG: COG0659; sulfate transporter 4515524..4517062 Pseudomonas stutzeri A1501 5097120 YP_001174626.1 CDS PST_4162 NC_009434.1 4517163 4517429 D amino acid transporter 4517163..4517429 Pseudomonas stutzeri A1501 5097121 YP_001174627.1 CDS coxB NC_009434.1 4517686 4518795 D Code: C; COG: COG1622; cytochrome c oxidase subunit II 4517686..4518795 Pseudomonas stutzeri A1501 5097122 YP_001174628.1 CDS coxA NC_009434.1 4518919 4520445 D Code: C; COG: COG0843; cytochrome c oxidase subunit I 4518919..4520445 Pseudomonas stutzeri A1501 5097123 YP_001174629.1 CDS ctaG NC_009434.1 4520510 4521085 D involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 4520510..4521085 Pseudomonas stutzeri A1501 5097124 YP_001174630.1 CDS coIII NC_009434.1 4521082 4521978 D Code: C; COG: COG1845; cytochrome c oxidase subunit III 4521082..4521978 Pseudomonas stutzeri A1501 5097125 YP_001174631.1 CDS PST_4167 NC_009434.1 4521986 4522201 R hypothetical protein complement(4521986..4522201) Pseudomonas stutzeri A1501 5097126 YP_001174632.1 CDS PST_4168 NC_009434.1 4522260 4522997 D Code: S; COG: COG3346; hypothetical protein 4522260..4522997 Pseudomonas stutzeri A1501 5097127 YP_001174633.1 CDS PST_4169 NC_009434.1 4522972 4523550 D hypothetical protein 4522972..4523550 Pseudomonas stutzeri A1501 5097128 YP_001174634.1 CDS PST_4170 NC_009434.1 4523603 4524658 D Code: O; COG: COG1612; hypothetical protein 4523603..4524658 Pseudomonas stutzeri A1501 5097129 YP_001174635.1 CDS cyoE-1 NC_009434.1 4524676 4525575 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 4524676..4525575 Pseudomonas stutzeri A1501 5097130 YP_001174636.1 CDS PST_4172 NC_009434.1 4525754 4526389 D Code: R; COG: COG1999; Sco1/SenC family protein 4525754..4526389 Pseudomonas stutzeri A1501 5097131 YP_001174637.1 CDS PST_4173 NC_009434.1 4526411 4527646 R Code: S; COG: COG3182; iron-regulated membrane protein complement(4526411..4527646) Pseudomonas stutzeri A1501 5097132 YP_001174638.1 CDS PST_4174 NC_009434.1 4527685 4530138 R Code: P; COG: COG1629; TonB-dependent siderophore receptor complement(4527685..4530138) Pseudomonas stutzeri A1501 5097133 YP_001174639.1 CDS PST_4175 NC_009434.1 4530238 4531200 R Code: PT; COG: COG3712; transmembrane sensor complement(4530238..4531200) Pseudomonas stutzeri A1501 5097134 YP_001174640.1 CDS PST_4176 NC_009434.1 4531200 4531715 R Code: K; COG: COG1595; ECF subfamily RNA polymerase sigma-70 factor complement(4531200..4531715) Pseudomonas stutzeri A1501 5097135 YP_001174641.1 CDS PST_4177 NC_009434.1 4531881 4532411 D hypothetical protein 4531881..4532411 Pseudomonas stutzeri A1501 5097136 YP_001174642.1 CDS PST_4178 NC_009434.1 4532454 4532816 R NADH:ubiquinone oxidoreductase 49 kD subunit 7 complement(4532454..4532816) Pseudomonas stutzeri A1501 5097137 YP_001174643.1 CDS PST_4179 NC_009434.1 4532888 4533874 D Code: R; COG: COG0523; cobalamin synthesis protein/P47K family protein 4532888..4533874 Pseudomonas stutzeri A1501 5097138 YP_001174644.1 CDS PST_4180 NC_009434.1 4533880 4534254 R hypothetical protein complement(4533880..4534254) Pseudomonas stutzeri A1501 5097139 YP_001174645.1 CDS PST_4181 NC_009434.1 4534335 4534742 R hypothetical protein complement(4534335..4534742) Pseudomonas stutzeri A1501 5097140 YP_001174646.1 CDS PST_4182 NC_009434.1 4534974 4537244 D Code: T; COG: COG4251; phytochrome family protein 4534974..4537244 Pseudomonas stutzeri A1501 5097141 YP_001174647.1 CDS PST_4183 NC_009434.1 4537244 4537720 D Code: T; COG: COG0784; response regulator 4537244..4537720 Pseudomonas stutzeri A1501 5097142 YP_001174648.1 CDS PST_4184 NC_009434.1 4537784 4540189 D sensory box histidine kinase/response regulator 4537784..4540189 Pseudomonas stutzeri A1501 5097143 YP_001174649.1 CDS PST_4185 NC_009434.1 4540182 4540736 D Code: P; COG: COG3230; hypothetical protein 4540182..4540736 Pseudomonas stutzeri A1501 5097144 YP_001174650.1 CDS glmS NC_009434.1 4540797 4542647 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(4540797..4542647) Pseudomonas stutzeri A1501 5097145 YP_001174651.1 CDS PST_4187 NC_009434.1 4542650 4543432 R Code: KG; COG: COG1349; transcriptional regulator complement(4542650..4543432) Pseudomonas stutzeri A1501 5097146 YP_001174652.1 CDS PST_4188 NC_009434.1 4543532 4544143 R Code: E; COG: COG1280; amino acid transporter LysE complement(4543532..4544143) Pseudomonas stutzeri A1501 5097147 YP_001174653.1 CDS glmU NC_009434.1 4544238 4545596 R Code: M; COG: COG1207; UDP-N-acetylglucosamine pyrophosphorylase complement(4544238..4545596) Pseudomonas stutzeri A1501 5097148 YP_001174654.1 CDS atpC NC_009434.1 4545741 4546175 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(4545741..4546175) Pseudomonas stutzeri A1501 5097149 YP_001174655.1 CDS atpD NC_009434.1 4546245 4547621 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(4546245..4547621) Pseudomonas stutzeri A1501 5097150 YP_001174656.1 CDS atpG NC_009434.1 4547652 4548518 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(4547652..4548518) Pseudomonas stutzeri A1501 5097151 YP_001174657.1 CDS atpA NC_009434.1 4548569 4550113 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(4548569..4550113) Pseudomonas stutzeri A1501 5097152 YP_001174658.1 CDS atpH NC_009434.1 4550129 4550665 R Code: C; COG: COG0712; ATP synthase subunit delta complement(4550129..4550665) Pseudomonas stutzeri A1501 5097153 YP_001174659.1 CDS atpF NC_009434.1 4550678 4551148 R Code: C; COG: COG0711; ATP synthase subunit B complement(4550678..4551148) Pseudomonas stutzeri A1501 5097154 YP_001174660.1 CDS atpE NC_009434.1 4551241 4551468 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(4551241..4551468) Pseudomonas stutzeri A1501 5097155 YP_001174661.1 CDS atpB NC_009434.1 4551537 4552409 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(4551537..4552409) Pseudomonas stutzeri A1501 5097156 YP_001174662.1 CDS atpI NC_009434.1 4552424 4552750 R Code: C; COG: COG3312; ATP synthase protein I complement(4552424..4552750) Pseudomonas stutzeri A1501 5097157 YP_001174663.1 CDS parB NC_009434.1 4552956 4553828 R Code: K; COG: COG1475; chromosome partitioning protein ParB complement(4552956..4553828) Pseudomonas stutzeri A1501 5097158 YP_001174664.1 CDS PST_4200 NC_009434.1 4553838 4554626 R Code: D; COG: COG1192; ParA family protein complement(4553838..4554626) Pseudomonas stutzeri A1501 5097159 YP_001174665.1 CDS gidB NC_009434.1 4554645 4555292 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(4554645..4555292) Pseudomonas stutzeri A1501 5097160 YP_001174666.1 CDS gidA NC_009434.1 4555292 4557184 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(4555292..4557184) Pseudomonas stutzeri A1501 5097161 YP_001174667.1 CDS PST_4203 NC_009434.1 4557593 4557958 R Code: P; COG: COG1320; multicomponent potassium-proton antiporter subunit G complement(4557593..4557958) Pseudomonas stutzeri A1501 5097162 YP_001174668.1 CDS PST_4204 NC_009434.1 4557982 4558242 R Code: P; COG: COG2212; putative cation efflux system protein complement(4557982..4558242) Pseudomonas stutzeri A1501 5097163 YP_001174669.1 CDS PST_4205 NC_009434.1 4558245 4558589 R Code: P; COG: COG1863; Na+/H+ ion antiporter family protein complement(4558245..4558589) Pseudomonas stutzeri A1501 5097164 YP_001174670.1 CDS PST_4206 NC_009434.1 4558586 4560106 R Code: CP; COG: COG0651; NADH dehydrogenase complement(4558586..4560106) Pseudomonas stutzeri A1501 5097165 YP_001174671.1 CDS PST_4207 NC_009434.1 4560103 4560486 R Code: P; COG: COG1006; multicomponent potassium-proton antiporter subunit C complement(4560103..4560486) Pseudomonas stutzeri A1501 5097166 YP_001174672.1 CDS PST_4208 NC_009434.1 4560488 4560889 R monovalent cation/proton antiporter subunit complement(4560488..4560889) Pseudomonas stutzeri A1501 5097167 YP_001174673.1 CDS PST_4209 NC_009434.1 4560886 4563195 R Code: CP; COG: COG1009; NADH dehydrogenase complement(4560886..4563195) Pseudomonas stutzeri A1501 5097168 YP_001174674.1 CDS trmE NC_009434.1 4563480 4564847 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(4563480..4564847) Pseudomonas stutzeri A1501 5097169 YP_001174675.1 CDS yidC NC_009434.1 4564920 4566590 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC complement(4564920..4566590) Pseudomonas stutzeri A1501 5097170 YP_001174676.1 CDS PST_4212 NC_009434.1 4566593 4566838 R Code: S; COG: COG0759; hypothetical protein complement(4566593..4566838) Pseudomonas stutzeri A1501 5097171 YP_001174677.1 CDS rnpA NC_009434.1 4566831 4567226 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(4566831..4567226) Pseudomonas stutzeri A1501 5097172 YP_001174678.1 CDS rpmH NC_009434.1 4567241 4567375 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(4567241..4567375) Pseudomonas stutzeri A1501 5097173 PST_0094 tRNA PST_0094 NC_009434.1 111101 111177 R tRNA-Arg complement(111101..111177) Pseudomonas stutzeri A1501 5095448 PST_0260 tRNA PST_0260 NC_009434.1 297607 297682 R tRNA-Thr complement(297607..297682) Pseudomonas stutzeri A1501 5095032 PST_0711 tRNA PST_0711 NC_009434.1 813658 813734 R tRNA-Met complement(813658..813734) Pseudomonas stutzeri A1501 5094564 PST_0760 tRNA PST_0760 NC_009434.1 868336 868412 D tRNA-Ile 868336..868412 Pseudomonas stutzeri A1501 5094613 PST_0761 tRNA PST_0761 NC_009434.1 868419 868494 D tRNA-Ala 868419..868494 Pseudomonas stutzeri A1501 5094614 PST_0766 tRNA PST_0766 NC_009434.1 874530 874614 D tRNA-Tyr 874530..874614 Pseudomonas stutzeri A1501 5094619 PST_0767 tRNA PST_0767 NC_009434.1 874640 874713 D tRNA-Gly 874640..874713 Pseudomonas stutzeri A1501 5094620 PST_0768 tRNA PST_0768 NC_009434.1 874740 874815 D tRNA-Thr 874740..874815 Pseudomonas stutzeri A1501 5098438 PST_0770 tRNA PST_0770 NC_009434.1 876145 876220 D tRNA-Trp 876145..876220 Pseudomonas stutzeri A1501 5098440 PST_1260 tRNA PST_1260 NC_009434.1 1370963 1371036 R tRNA-Gly complement(1370963..1371036) Pseudomonas stutzeri A1501 5097346 PST_1372 tRNA PST_1372 NC_009434.1 1471710 1471800 D tRNA-Ser 1471710..1471800 Pseudomonas stutzeri A1501 5097459 PST_1373 tRNA PST_1373 NC_009434.1 1471911 1471987 D tRNA-Arg 1471911..1471987 Pseudomonas stutzeri A1501 5097460 PST_1374 tRNA PST_1374 NC_009434.1 1472057 1472133 D tRNA-Arg 1472057..1472133 Pseudomonas stutzeri A1501 5097461 PST_1381 tRNA PST_1381 NC_009434.1 1479180 1479256 D tRNA-Arg 1479180..1479256 Pseudomonas stutzeri A1501 5097468 PST_1463 tRNA PST_1463 NC_009434.1 1569599 1569674 D tRNA-Thr 1569599..1569674 Pseudomonas stutzeri A1501 5097550 PST_1490 tRNA PST_1490 NC_009434.1 1599509 1599578 D tRNA-Ser 1599509..1599578 Pseudomonas stutzeri A1501 5097577 PST_1646 tRNA PST_1646 NC_009434.1 1766060 1766149 R tRNA-Ser complement(1766060..1766149) Pseudomonas stutzeri A1501 5097731 PST_1678 tRNA PST_1678 NC_009434.1 1798706 1798782 D tRNA-Ile 1798706..1798782 Pseudomonas stutzeri A1501 5097763 PST_1679 tRNA PST_1679 NC_009434.1 1798789 1798864 D tRNA-Ala 1798789..1798864 Pseudomonas stutzeri A1501 5097764 PST_1764 tRNA PST_1764 NC_009434.1 1904615 1904691 R tRNA-Met complement(1904615..1904691) Pseudomonas stutzeri A1501 5097848 PST_1765 tRNA PST_1765 NC_009434.1 1904851 1904927 R tRNA-Met complement(1904851..1904927) Pseudomonas stutzeri A1501 5097849 PST_1788 tRNA PST_1788 NC_009434.1 1928959 1929034 D tRNA-Val 1928959..1929034 Pseudomonas stutzeri A1501 5097872 PST_1789 tRNA PST_1789 NC_009434.1 1929072 1929148 D tRNA-Asp 1929072..1929148 Pseudomonas stutzeri A1501 5097873 PST_1989 tRNA PST_1989 NC_009434.1 2160517 2160606 D tRNA-Ser 2160517..2160606 Pseudomonas stutzeri A1501 5098073 PST_2055 tRNA PST_2055 NC_009434.1 2233520 2233596 D tRNA-Arg 2233520..2233596 Pseudomonas stutzeri A1501 5098138 PST_2056 tRNA PST_2056 NC_009434.1 2233630 2233705 D tRNA-His 2233630..2233705 Pseudomonas stutzeri A1501 5098139 PST_2057 tRNA PST_2057 NC_009434.1 2233757 2233841 D tRNA-Leu 2233757..2233841 Pseudomonas stutzeri A1501 5098140 PST_2088 tRNA PST_2088 NC_009434.1 2269935 2270010 D tRNA-Gly 2269935..2270010 Pseudomonas stutzeri A1501 5098171 PST_2090 tRNA PST_2090 NC_009434.1 2270057 2270130 D tRNA-Cys 2270057..2270130 Pseudomonas stutzeri A1501 5098172 PST_2106 tRNA PST_2106 NC_009434.1 2282310 2282396 R tRNA-Leu complement(2282310..2282396) Pseudomonas stutzeri A1501 5098189 PST_2319 tRNA PST_2319 NC_009434.1 2534007 2534082 R tRNA-Ala complement(2534007..2534082) Pseudomonas stutzeri A1501 5098399 PST_2320 tRNA PST_2320 NC_009434.1 2534089 2534165 R tRNA-Ile complement(2534089..2534165) Pseudomonas stutzeri A1501 5098400 PST_2361 tRNA PST_2361 NC_009434.1 2584180 2584256 R tRNA-Pro complement(2584180..2584256) Pseudomonas stutzeri A1501 5095254 PST_2370 tRNA PST_2370 NC_009434.1 2591931 2592007 R tRNA-Val complement(2591931..2592007) Pseudomonas stutzeri A1501 5095263 PST_2378 tRNA PST_2378 NC_009434.1 2597656 2597732 D tRNA-Pro 2597656..2597732 Pseudomonas stutzeri A1501 5095271 PST_2530 tRNA PST_2530 NC_009434.1 2760167 2760242 R tRNA-Gly complement(2760167..2760242) Pseudomonas stutzeri A1501 5095492 PST_2532 tRNA PST_2532 NC_009434.1 2760260 2760335 R tRNA-Glu complement(2760260..2760335) Pseudomonas stutzeri A1501 5095493 PST_2771 tRNA PST_2771 NC_009434.1 2996044 2996120 R tRNA-Asp complement(2996044..2996120) Pseudomonas stutzeri A1501 5095733 PST_2772 tRNA PST_2772 NC_009434.1 2996134 2996209 R tRNA-Val complement(2996134..2996209) Pseudomonas stutzeri A1501 5095734 PST_2787 tRNA PST_2787 NC_009434.1 3014370 3014459 R tRNA-Ser complement(3014370..3014459) Pseudomonas stutzeri A1501 5095749 PST_2798 tRNA PST_2798 NC_009434.1 3024834 3024909 R tRNA-Lys complement(3024834..3024909) Pseudomonas stutzeri A1501 5095760 PST_2992 tRNA PST_2992 NC_009434.1 3223943 3224018 R tRNA-Glu complement(3223943..3224018) Pseudomonas stutzeri A1501 5095954 PST_2993 tRNA PST_2993 NC_009434.1 3224061 3224136 R tRNA-Ala complement(3224061..3224136) Pseudomonas stutzeri A1501 5095955 PST_2994 tRNA PST_2994 NC_009434.1 3224180 3224255 R tRNA-Glu complement(3224180..3224255) Pseudomonas stutzeri A1501 5095956 PST_2995 tRNA PST_2995 NC_009434.1 3224321 3224396 R tRNA-Ala complement(3224321..3224396) Pseudomonas stutzeri A1501 5095957 PST_2999 tRNA PST_2999 NC_009434.1 3229814 3229889 D tRNA-Asn 3229814..3229889 Pseudomonas stutzeri A1501 5095961 PST_3053 tRNA PST_3053 NC_009434.1 3282976 3283062 D tRNA-Leu 3282976..3283062 Pseudomonas stutzeri A1501 5096015 PST_3187 tRNA PST_3187 NC_009434.1 3434083 3434157 D tRNA-Gln 3434083..3434157 Pseudomonas stutzeri A1501 5096148 PST_3188 tRNA PST_3188 NC_009434.1 3434216 3434290 D tRNA-Gln 3434216..3434290 Pseudomonas stutzeri A1501 5096149 PST_3232 tRNA PST_3232 NC_009434.1 3493808 3493884 R tRNA-Met complement(3493808..3493884) Pseudomonas stutzeri A1501 5096193 PST_3250 tRNA PST_3250 NC_009434.1 3517190 3517265 R tRNA-Ala complement(3517190..3517265) Pseudomonas stutzeri A1501 5096211 PST_3251 tRNA PST_3251 NC_009434.1 3517296 3517372 R tRNA-Ile complement(3517296..3517372) Pseudomonas stutzeri A1501 5096212 PST_3313 tRNA PST_3313 NC_009434.1 3587315 3587391 R tRNA-Met complement(3587315..3587391) Pseudomonas stutzeri A1501 5096274 PST_3314 tRNA PST_3314 NC_009434.1 3587486 3587571 R tRNA-Leu complement(3587486..3587571) Pseudomonas stutzeri A1501 5096275 PST_3342 tRNA PST_3342 NC_009434.1 3618456 3618530 D tRNA-Leu 3618456..3618530 Pseudomonas stutzeri A1501 5096303 PST_3637 tRNA PST_3637 NC_009434.1 3927351 3927426 R tRNA-Lys complement(3927351..3927426) Pseudomonas stutzeri A1501 5096598 PST_3638 tRNA PST_3638 NC_009434.1 3927432 3927508 R tRNA-Pro complement(3927432..3927508) Pseudomonas stutzeri A1501 5096599 PST_3639 tRNA PST_3639 NC_009434.1 3927518 3927593 R tRNA-Asn complement(3927518..3927593) Pseudomonas stutzeri A1501 5096600 PST_3660 tRNA PST_3660 NC_009434.1 3956892 3956978 D tRNA-Leu 3956892..3956978 Pseudomonas stutzeri A1501 5096621 PST_3662 tRNA PST_3662 NC_009434.1 3957093 3957179 D tRNA-Leu 3957093..3957179 Pseudomonas stutzeri A1501 5096623 PST_4099 tRNA PST_4099 NC_009434.1 4453509 4453584 D tRNA-Phe 4453509..4453584 Pseudomonas stutzeri A1501 5097058 PST_0759 rRNA PST_0759 NC_009434.1 866708 868256 D 16S ribosomal RNA 866708..868256 Pseudomonas stutzeri A1501 5094612 PST_0762 rRNA PST_0762 NC_009434.1 868749 871649 D 23S ribosomal RNA 868749..871649 Pseudomonas stutzeri A1501 5094615 PST_0762a rRNA PST_0762a NC_009434.1 871772 871891 D 5S ribosomal RNA 871772..871891 Pseudomonas stutzeri A1501 5236306 PST_1677 rRNA PST_1677 NC_009434.1 1797078 1798626 D 16S ribosomal RNA 1797078..1798626 Pseudomonas stutzeri A1501 5097762 PST_1680 rRNA PST_1680 NC_009434.1 1799119 1802019 D 23S ribosomal RNA 1799119..1802019 Pseudomonas stutzeri A1501 5097765 PST_1680a rRNA PST_1680a NC_009434.1 1802142 1802261 D 5S ribosomal RNA 1802142..1802261 Pseudomonas stutzeri A1501 5236308 PST_2317a rRNA PST_2317a NC_009434.1 2530610 2530729 R 5S ribosomal RNA complement(2530610..2530729) Pseudomonas stutzeri A1501 5309690 PST_2318 rRNA PST_2318 NC_009434.1 2530852 2533752 R 23S ribosomal RNA complement(2530852..2533752) Pseudomonas stutzeri A1501 5098398 PST_2321 rRNA PST_2321 NC_009434.1 2534256 2535793 R 16S ribosomal RNA complement(2534256..2535793) Pseudomonas stutzeri A1501 5098401 PST_3248a rRNA PST_3248a NC_009434.1 3513772 3513891 R 5S ribosomal RNA complement(3513772..3513891) Pseudomonas stutzeri A1501 5309689 PST_3249 rRNA PST_3249 NC_009434.1 3514035 3516937 R 23S ribosomal RNA complement(3514035..3516937) Pseudomonas stutzeri A1501 5096210 PST_3252 rRNA PST_3252 NC_009434.1 3517463 3519000 R 16S ribosomal RNA complement(3517463..3519000) Pseudomonas stutzeri A1501 5096213