-- dump date 20240506_034442 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP035952.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP035952.1.REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available.REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7xREFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeqREFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 20 of 60REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 20 of 60 Pseudo Genes (incomplete) :: 46 of 60REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 20 of 60 Pseudo Genes (incomplete) :: 46 of 60 Pseudo Genes (internal stop) :: 9 of 60REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 20 of 60 Pseudo Genes (incomplete) :: 46 of 60 Pseudo Genes (internal stop) :: 9 of 60 Pseudo Genes (multiple problems) :: 13 of 60REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 20 of 60 Pseudo Genes (incomplete) :: 46 of 60 Pseudo Genes (internal stop) :: 9 of 60 Pseudo Genes (multiple problems) :: 13 of 60 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP035952.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 83.7x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/17/2024 13:07:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,227 CDSs (total) :: 5,128 Genes (coding) :: 5,068 CDSs (with protein) :: 5,068 Genes (RNA) :: 99 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 73 ncRNAs :: 4 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 20 of 60 Pseudo Genes (incomplete) :: 46 of 60 Pseudo Genes (internal stop) :: 9 of 60 Pseudo Genes (multiple problems) :: 13 of 60 ##Genome-Annotation-Data-END## COMPLETENESS: full length.