-- dump date 20250217_002505 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP018920.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP018920.1.REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67xREFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS IIREFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98 Pseudo Genes (internal stop) :: 1 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98 Pseudo Genes (internal stop) :: 1 of 98 Pseudo Genes (multiple problems) :: 7 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98 Pseudo Genes (internal stop) :: 1 of 98 Pseudo Genes (multiple problems) :: 7 of 98 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP018920.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS_HGAP_Assembly v. 2 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98 Pseudo Genes (internal stop) :: 1 of 98 Pseudo Genes (multiple problems) :: 7 of 98 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_AP018921.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP018921.1.REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67xREFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PEREFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98 Pseudo Genes (internal stop) :: 1 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98 Pseudo Genes (internal stop) :: 1 of 98 Pseudo Genes (multiple problems) :: 7 of 98REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98 Pseudo Genes (internal stop) :: 1 of 98 Pseudo Genes (multiple problems) :: 7 of 98 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP018921.1. Annotated at DFAST https://dfast.nig.ac.jp/ The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.6 Genome Coverage :: 67x Sequencing Technology :: PacBio RS II; HiSeq PE ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003945385.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:46:55 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,127 CDSs (total) :: 7,058 Genes (coding) :: 6,960 CDSs (with protein) :: 6,960 Genes (RNA) :: 69 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 53 ncRNAs :: 4 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 20 of 98 Pseudo Genes (incomplete) :: 84 of 98 Pseudo Genes (internal stop) :: 1 of 98 Pseudo Genes (multiple problems) :: 7 of 98 ##Genome-Annotation-Data-END## COMPLETENESS: full length.