-- dump date 20140620_020750 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_263309.1 71064582 3514718 520..1965 1 NC_007204.1 DnaA is an ATP- and DNA-binding protein. It binds specifically to 9 bp nucleotide repeats known as dnaA boxes which are found in the chromosome origin of replication (oriC).; Citation: Skarstad K and Boye E. 1994. The initiator protein DnaA: evolution, properties and function. Biochim Biophys Acta. 1217(2):111-30.; chromosome replication initiator DnaA 1965 dnaA 3514718 dnaA Psychrobacter arcticus 273-4 chromosome replication initiator DnaA YP_263309.1 520 D 259536 CDS YP_263310.1 71064583 3514719 2125..3300 1 NC_007204.1 A dimer of the beta subunit of DNA polymerase forms a ring which encircles duplex DNA.; Citation: Kong XP, Onrust R, O'Donnell M, Kuriyan J. 1992. Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp. Cell. 69:425-437.; DNA polymerase III subunit beta 3300 dnaN 3514719 dnaN Psychrobacter arcticus 273-4 DNA polymerase III subunit beta YP_263310.1 2125 D 259536 CDS YP_263311.1 71064584 3514720 3463..4677 1 NC_007204.1 DNA replication and repair protein RecF 4677 recF 3514720 recF Psychrobacter arcticus 273-4 DNA replication and repair protein RecF YP_263311.1 3463 D 259536 CDS YP_263312.1 71064585 3514721 5179..7794 1 NC_007204.1 DNA gyrase is a type II topoisomerase that catalyses an ATP-dependent 2 strand cleavage of DNA.; DNA gyrase subunit B 7794 gyrB 3514721 gyrB Psychrobacter arcticus 273-4 DNA gyrase subunit B YP_263312.1 5179 D 259536 CDS YP_263313.1 71064586 3514686 7907..8500 1 NC_007204.1 Possible transmembrane protein: 6 TM domains; hypothetical protein 8500 3514686 Psyc_0005 Psychrobacter arcticus 273-4 hypothetical protein YP_263313.1 7907 D 259536 CDS YP_263314.1 71064587 3514687 complement(8586..9371) 1 NC_007204.1 IS3 family transposase 9371 3514687 Psyc_0006 Psychrobacter arcticus 273-4 IS3 family transposase YP_263314.1 8586 R 259536 CDS YP_263315.1 71064588 3514688 complement(9413..9931) 1 NC_007204.1 IS3/IS911 family transposase orfA 9931 3514688 Psyc_0007 Psychrobacter arcticus 273-4 IS3/IS911 family transposase orfA YP_263315.1 9413 R 259536 CDS YP_263316.1 71064589 3514689 complement(10178..11215) 1 NC_007204.1 SAM-dependent methyltransferase 11215 3514689 Psyc_0008 Psychrobacter arcticus 273-4 SAM-dependent methyltransferase YP_263316.1 10178 R 259536 CDS YP_263317.1 71064590 3514690 11806..13416 1 NC_007204.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 13416 guaA 3514690 guaA Psychrobacter arcticus 273-4 GMP synthase YP_263317.1 11806 D 259536 CDS YP_263318.1 71064591 3514691 13573..14865 1 NC_007204.1 hypothetical protein 14865 3514691 Psyc_0010 Psychrobacter arcticus 273-4 hypothetical protein YP_263318.1 13573 D 259536 CDS YP_263319.1 71064592 3514692 complement(14993..15997) 1 NC_007204.1 Zinc-containing alcohol dehydrogenase 15997 3514692 Psyc_0011 Psychrobacter arcticus 273-4 Zinc-containing alcohol dehydrogenase YP_263319.1 14993 R 259536 CDS YP_263320.1 71064593 3514693 complement(16221..17198) 1 NC_007204.1 nuclear receptor-binding factor-like protein 17198 3514693 Psyc_0012 Psychrobacter arcticus 273-4 nuclear receptor-binding factor-like protein YP_263320.1 16221 R 259536 CDS YP_263321.1 71064594 3514694 complement(17341..17595) 1 NC_007204.1 hypothetical protein 17595 3514694 Psyc_0013 Psychrobacter arcticus 273-4 hypothetical protein YP_263321.1 17341 R 259536 CDS YP_263322.1 71064595 3514695 complement(18119..19162) 1 NC_007204.1 2-nitropropane dioxygenase 19162 3514695 Psyc_0014 Psychrobacter arcticus 273-4 2-nitropropane dioxygenase YP_263322.1 18119 R 259536 CDS YP_263323.1 71064596 3514696 complement(19335..20621) 1 NC_007204.1 No RBS found.; hypothetical protein 20621 3514696 Psyc_0015 Psychrobacter arcticus 273-4 hypothetical protein YP_263323.1 19335 R 259536 CDS YP_263324.1 71064597 3514697 20634..20930 1 NC_007204.1 IS3/IS911 family transposase OrfA 20930 3514697 Psyc_0016 Psychrobacter arcticus 273-4 IS3/IS911 family transposase OrfA YP_263324.1 20634 D 259536 CDS YP_263325.1 71064598 3514698 20981..21799 1 NC_007204.1 IS30 family transposase 21799 3514698 Psyc_0017 Psychrobacter arcticus 273-4 IS30 family transposase YP_263325.1 20981 D 259536 CDS YP_263326.1 71064599 3514699 complement(21800..22450) 1 NC_007204.1 hypothetical protein 22450 3514699 Psyc_0018 Psychrobacter arcticus 273-4 hypothetical protein YP_263326.1 21800 R 259536 CDS YP_263327.1 71064600 3514700 complement(22443..22952) 1 NC_007204.1 similar to Burkholderia pseudomallei hypothetical protein BPSL0749; hypothetical protein 22952 3514700 Psyc_0019 Psychrobacter arcticus 273-4 hypothetical protein YP_263327.1 22443 R 259536 CDS YP_263328.1 71064601 3514701 complement(22945..23997) 1 NC_007204.1 RBS found.; hypothetical protein 23997 3514701 Psyc_0020 Psychrobacter arcticus 273-4 hypothetical protein YP_263328.1 22945 R 259536 CDS YP_263329.1 71064602 3514702 complement(24177..24554) 1 NC_007204.1 This protein may be a peroxiredoxin, COG2044. RBS found.; hypothetical protein 24554 3514702 Psyc_0021 Psychrobacter arcticus 273-4 hypothetical protein YP_263329.1 24177 R 259536 CDS YP_263330.1 71064603 3514703 complement(24825..25877) 1 NC_007204.1 This protein may contain an alpha/beta-hydrolase fold (COG0429) and an esterase/lipase/thioesterase active site (PS50187). RBS found.; hypothetical protein 25877 3514703 Psyc_0022 Psychrobacter arcticus 273-4 hypothetical protein YP_263330.1 24825 R 259536 CDS YP_263331.1 71064604 3514704 complement(26178..26774) 1 NC_007204.1 RBS found.; hypothetical protein 26774 3514704 Psyc_0023 Psychrobacter arcticus 273-4 hypothetical protein YP_263331.1 26178 R 259536 CDS YP_263332.1 71064605 3514760 26978..27697 1 NC_007204.1 ribosomal small subunit pseudouridine synthase A 27697 3514760 Psyc_0024 Psychrobacter arcticus 273-4 ribosomal small subunit pseudouridine synthase A YP_263332.1 26978 D 259536 CDS YP_263333.1 71064606 3514761 28179..29264 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.996 at residue 24; hypothetical protein 29264 3514761 Psyc_0025 Psychrobacter arcticus 273-4 hypothetical protein YP_263333.1 28179 D 259536 CDS YP_263334.1 71064607 3514762 complement(29409..30059) 1 NC_007204.1 hypothetical protein 30059 3514762 Psyc_0026 Psychrobacter arcticus 273-4 hypothetical protein YP_263334.1 29409 R 259536 CDS YP_263335.1 71064608 3514763 30543..31667 1 NC_007204.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 31667 3514763 Psyc_0027 Psychrobacter arcticus 273-4 molecular chaperone DnaJ YP_263335.1 30543 D 259536 CDS YP_263336.1 71064609 3514764 31996..32832 1 NC_007204.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 32832 dapB 3514764 dapB Psychrobacter arcticus 273-4 dihydrodipicolinate reductase YP_263336.1 31996 D 259536 CDS YP_263337.1 71064610 3514765 complement(32915..34090) 1 NC_007204.1 ornithine decarboxylase 34090 3514765 Psyc_0029 Psychrobacter arcticus 273-4 ornithine decarboxylase YP_263337.1 32915 R 259536 CDS YP_263338.1 71064611 3514766 complement(34198..34752) 1 NC_007204.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 34752 def 3514766 def Psychrobacter arcticus 273-4 peptide deformylase YP_263338.1 34198 R 259536 CDS YP_263339.1 71064612 3514767 complement(35124..35378) 1 NC_007204.1 Signal peptide and 3 transmembrane helices predicted. RBS found.; hypothetical protein 35378 3514767 Psyc_0031 Psychrobacter arcticus 273-4 hypothetical protein YP_263339.1 35124 R 259536 CDS YP_263340.1 71064613 3514768 complement(35713..37230) 1 NC_007204.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 37230 mpl 3514768 mpl Psychrobacter arcticus 273-4 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_263340.1 35713 R 259536 CDS YP_263341.1 71064614 3514769 complement(37523..38146) 1 NC_007204.1 hypothetical protein 38146 3514769 Psyc_0033 Psychrobacter arcticus 273-4 hypothetical protein YP_263341.1 37523 R 259536 CDS YP_263342.1 71064615 3514770 complement(38341..38871) 1 NC_007204.1 disulfide bond formation protein 38871 dsbB 3514770 dsbB Psychrobacter arcticus 273-4 disulfide bond formation protein YP_263342.1 38341 R 259536 CDS YP_263343.1 71064616 3514771 complement(38926..40509) 1 NC_007204.1 glutamate-cysteine ligase 40509 gshA 3514771 gshA Psychrobacter arcticus 273-4 glutamate-cysteine ligase YP_263343.1 38926 R 259536 CDS YP_263344.1 71064617 3514772 complement(40901..41281) 1 NC_007204.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 41281 3514772 Psyc_0036 Psychrobacter arcticus 273-4 iron-sulfur cluster insertion protein ErpA YP_263344.1 40901 R 259536 CDS YP_263345.1 71064618 3514773 41787..43805 1 NC_007204.1 ABC transporter ATPase 43805 3514773 Psyc_0037 Psychrobacter arcticus 273-4 ABC transporter ATPase YP_263345.1 41787 D 259536 CDS YP_263346.1 71064619 3514774 complement(43911..44279) 1 NC_007204.1 Lipoprotein conserved domain; lipoprotein A 44279 rlpA 3514774 rlpA Psychrobacter arcticus 273-4 lipoprotein A YP_263346.1 43911 R 259536 CDS YP_263347.1 71064620 3514775 44824..45822 1 NC_007204.1 molecular chaperone DnaJ 45822 3514775 Psyc_0039 Psychrobacter arcticus 273-4 molecular chaperone DnaJ YP_263347.1 44824 D 259536 CDS YP_263348.1 71064621 3514776 45908..46231 1 NC_007204.1 hypothetical protein 46231 3514776 Psyc_0040 Psychrobacter arcticus 273-4 hypothetical protein YP_263348.1 45908 D 259536 CDS YP_263349.1 71064622 3514777 complement(46320..47522) 1 NC_007204.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 47522 sstT 3514777 sstT Psychrobacter arcticus 273-4 serine/threonine transporter SstT YP_263349.1 46320 R 259536 CDS YP_263350.1 71064623 3514778 complement(47861..48319) 1 NC_007204.1 Chi forms a 1:1 heterodimer with psi. The chi:psi complex functions by increasing the affinity of tau and gamma for delta.delta allowing a functional clamp-loading complex to form at physiological subunit concentrations.; DNA polymerase III subunit chi 48319 holC 3514778 holC Psychrobacter arcticus 273-4 DNA polymerase III subunit chi YP_263350.1 47861 R 259536 CDS YP_263351.1 71064624 3514779 complement(48355..50013) 1 NC_007204.1 PepA aminopeptidase 50013 pepA 3514779 pepA Psychrobacter arcticus 273-4 PepA aminopeptidase YP_263351.1 48355 R 259536 CDS YP_263352.1 71064625 3514609 complement(50261..50866) 1 NC_007204.1 isochorismatase hydrolase 50866 3514609 Psyc_0044 Psychrobacter arcticus 273-4 isochorismatase hydrolase YP_263352.1 50261 R 259536 CDS YP_263353.1 71064626 3514610 51384..52634 1 NC_007204.1 hypothetical protein 52634 3514610 Psyc_0045 Psychrobacter arcticus 273-4 hypothetical protein YP_263353.1 51384 D 259536 CDS YP_263354.1 71064627 3514611 52634..53842 1 NC_007204.1 hypothetical protein 53842 3514611 Psyc_0046 Psychrobacter arcticus 273-4 hypothetical protein YP_263354.1 52634 D 259536 CDS YP_263355.1 71064628 3514612 complement(53920..54528) 1 NC_007204.1 Possible 16S RNA G1207 methylase RsmC (COG2813). RBS found.; hypothetical protein 54528 3514612 Psyc_0047 Psychrobacter arcticus 273-4 hypothetical protein YP_263355.1 53920 R 259536 CDS YP_263356.1 71064629 3514613 complement(55288..55752) 1 NC_007204.1 Signal peptide and 5 transmembrane helices predicted.; hypothetical protein 55752 3514613 Psyc_0048 Psychrobacter arcticus 273-4 hypothetical protein YP_263356.1 55288 R 259536 CDS YP_263357.1 71064630 3514614 complement(55758..56192) 1 NC_007204.1 Signal peptide and 5 transmembrane helices predicted. RBS found.; hypothetical protein 56192 3514614 Psyc_0049 Psychrobacter arcticus 273-4 hypothetical protein YP_263357.1 55758 R 259536 CDS YP_263358.1 71064631 3514615 56291..57226 1 NC_007204.1 LysR family transcriptional regulator 57226 3514615 Psyc_0050 Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_263358.1 56291 D 259536 CDS YP_263359.1 71064632 3514616 57548..59107 1 NC_007204.1 hypothetical protein 59107 3514616 Psyc_0051 Psychrobacter arcticus 273-4 hypothetical protein YP_263359.1 57548 D 259536 CDS YP_263360.1 71064633 3514617 complement(59255..60193) 1 NC_007204.1 phage integrase 60193 xerD 3514617 xerD Psychrobacter arcticus 273-4 phage integrase YP_263360.1 59255 R 259536 CDS YP_263361.1 71064634 3514618 complement(60448..61662) 1 NC_007204.1 This protein contains a SAM (and some other nucleotide) binding motif. RBS found.; hypothetical protein 61662 3514618 Psyc_0053 Psychrobacter arcticus 273-4 hypothetical protein YP_263361.1 60448 R 259536 CDS YP_263362.1 71064635 3514619 complement(61869..62129) 1 NC_007204.1 Possible redox protein regulator of disulfide bond formation, Sir A. RBS found.; hypothetical protein 62129 3514619 Psyc_0054 Psychrobacter arcticus 273-4 hypothetical protein YP_263362.1 61869 R 259536 CDS YP_263363.1 71064636 3514620 complement(62205..62717) 1 NC_007204.1 hypothetical protein 62717 3514620 Psyc_0055 Psychrobacter arcticus 273-4 hypothetical protein YP_263363.1 62205 R 259536 CDS YP_263364.1 71064637 3514621 complement(62796..63329) 1 NC_007204.1 This protein contains a ribonuclease RNase H fold (COG0816). RBS found.; hypothetical protein 63329 3514621 Psyc_0056 Psychrobacter arcticus 273-4 hypothetical protein YP_263364.1 62796 R 259536 CDS YP_263365.1 71064638 3514622 complement(63380..63943) 1 NC_007204.1 contains DNA binding region also has domain hit to protein DUF 179; transcriptional regulator 63943 algH 3514622 algH Psychrobacter arcticus 273-4 transcriptional regulator YP_263365.1 63380 R 259536 CDS YP_263366.1 71064639 3514623 complement(64062..65741) 1 NC_007204.1 DNA repair protein 65741 recN 3514623 recN Psychrobacter arcticus 273-4 DNA repair protein YP_263366.1 64062 R 259536 CDS YP_263367.1 71064640 3514624 66427..66762 1 NC_007204.1 hypothetical protein 66762 3514624 Psyc_0059 Psychrobacter arcticus 273-4 hypothetical protein YP_263367.1 66427 D 259536 CDS YP_263368.1 71064641 3514625 66968..67738 1 NC_007204.1 RNA methyltransferase 67738 3514625 Psyc_0060 Psychrobacter arcticus 273-4 RNA methyltransferase YP_263368.1 66968 D 259536 CDS YP_263369.1 71064642 3514626 complement(67701..68393) 1 NC_007204.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 68393 coaE 3514626 coaE Psychrobacter arcticus 273-4 dephospho-CoA kinase YP_263369.1 67701 R 259536 CDS YP_263370.1 71064643 3514627 complement(68477..69376) 1 NC_007204.1 type 4 prepilin peptidase 1 69376 pilD 3514627 pilD Psychrobacter arcticus 273-4 type 4 prepilin peptidase 1 YP_263370.1 68477 R 259536 CDS YP_263371.1 71064644 3514149 complement(69402..70625) 1 NC_007204.1 pilin secretion/fimbrial assembly system protein, PilC 70625 pilC 3514149 pilC Psychrobacter arcticus 273-4 pilin secretion/fimbrial assembly system protein, PilC YP_263371.1 69402 R 259536 CDS YP_263372.1 71064645 3514150 complement(70862..72637) 1 NC_007204.1 pilin secretion/fimbrial assembly system protein, PilB 72637 pilB 3514150 pilB Psychrobacter arcticus 273-4 pilin secretion/fimbrial assembly system protein, PilB YP_263372.1 70862 R 259536 CDS YP_263373.1 71064646 3514151 73127..73936 1 NC_007204.1 triosephosphate isomerase 73936 tpiA 3514151 tpiA Psychrobacter arcticus 273-4 triosephosphate isomerase YP_263373.1 73127 D 259536 CDS YP_263374.1 71064647 3514152 74165..74473 1 NC_007204.1 preprotein translocase subunit SecG 74473 secG 3514152 secG Psychrobacter arcticus 273-4 preprotein translocase subunit SecG YP_263374.1 74165 D 259536 CDS YP_263375.1 71064648 3514155 75377..75877 1 NC_007204.1 hypothetical protein 75877 3514155 Psyc_0067 Psychrobacter arcticus 273-4 hypothetical protein YP_263375.1 75377 D 259536 CDS YP_263376.1 71064649 3514156 76010..77494 1 NC_007204.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 77494 nusA 3514156 nusA Psychrobacter arcticus 273-4 transcription elongation factor NusA YP_263376.1 76010 D 259536 CDS YP_263377.1 71064650 3514157 77646..80372 1 NC_007204.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 80372 infB 3514157 infB Psychrobacter arcticus 273-4 translation initiation factor IF-2 YP_263377.1 77646 D 259536 CDS YP_263378.1 71064651 3514158 80587..80991 1 NC_007204.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 80991 rbfA 3514158 rbfA Psychrobacter arcticus 273-4 ribosome-binding factor A YP_263378.1 80587 D 259536 CDS YP_263379.1 71064652 3514159 81008..82150 1 NC_007204.1 100 aa longer than homologs returned from blastp; tRNA pseudouridine synthase B 82150 truB 3514159 truB Psychrobacter arcticus 273-4 tRNA pseudouridine synthase B YP_263379.1 81008 D 259536 CDS YP_263380.1 71064653 3514160 82492..82677 1 NC_007204.1 hypothetical protein 82677 3514160 Psyc_0072 Psychrobacter arcticus 273-4 hypothetical protein YP_263380.1 82492 D 259536 CDS YP_263381.1 71064654 3514161 83015..83281 1 NC_007204.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 83281 rpsO 3514161 rpsO Psychrobacter arcticus 273-4 30S ribosomal protein S15 YP_263381.1 83015 D 259536 CDS YP_263382.1 71064655 3514162 83907..86009 1 NC_007204.1 polynucleotide phosphorylase 86009 pnp 3514162 pnp Psychrobacter arcticus 273-4 polynucleotide phosphorylase YP_263382.1 83907 D 259536 CDS YP_263383.1 71064656 3514163 complement(86116..86397) 1 NC_007204.1 hypothetical protein 86397 3514163 Psyc_0075 Psychrobacter arcticus 273-4 hypothetical protein YP_263383.1 86116 R 259536 CDS YP_263384.1 71064657 3514164 complement(86461..87066) 1 NC_007204.1 hypothetical protein 87066 3514164 Psyc_0076 Psychrobacter arcticus 273-4 hypothetical protein YP_263384.1 86461 R 259536 CDS YP_263385.1 71064658 3514165 complement(87218..87472) 1 NC_007204.1 hypothetical protein 87472 3514165 Psyc_0077 Psychrobacter arcticus 273-4 hypothetical protein YP_263385.1 87218 R 259536 CDS YP_263386.1 71064659 3514166 complement(87473..89698) 1 NC_007204.1 oligopeptidase A 89698 prlC 3514166 prlC Psychrobacter arcticus 273-4 oligopeptidase A YP_263386.1 87473 R 259536 CDS YP_263387.1 71064660 3514667 90323..91435 1 NC_007204.1 hypothetical protein 91435 3514667 Psyc_0079 Psychrobacter arcticus 273-4 hypothetical protein YP_263387.1 90323 D 259536 CDS YP_263388.1 71064661 3514668 91496..92404 1 NC_007204.1 hypothetical protein 92404 3514668 Psyc_0080 Psychrobacter arcticus 273-4 hypothetical protein YP_263388.1 91496 D 259536 CDS YP_263389.1 71064662 3514669 92464..93462 1 NC_007204.1 hypothetical protein 93462 3514669 Psyc_0081 Psychrobacter arcticus 273-4 hypothetical protein YP_263389.1 92464 D 259536 CDS YP_263390.1 71064663 3514670 complement(93498..94115) 1 NC_007204.1 DNA-N1-methyladenine dioxygenase 94115 alkB 3514670 alkB Psychrobacter arcticus 273-4 DNA-N1-methyladenine dioxygenase YP_263390.1 93498 R 259536 CDS YP_263391.1 71064664 3514671 complement(94165..96078) 1 NC_007204.1 eflux ABC transporter inner membrane protein 96078 3514671 Psyc_0083 Psychrobacter arcticus 273-4 eflux ABC transporter inner membrane protein YP_263391.1 94165 R 259536 CDS YP_263392.1 71064665 3514672 96361..97209 1 NC_007204.1 hypothetical protein 97209 3514672 Psyc_0084 Psychrobacter arcticus 273-4 hypothetical protein YP_263392.1 96361 D 259536 CDS YP_263393.1 71064666 3514673 97383..98273 1 NC_007204.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 98273 3514673 Psyc_0085 Psychrobacter arcticus 273-4 fructose-1,6-bisphosphate aldolase YP_263393.1 97383 D 259536 CDS YP_263394.1 71064667 3514674 complement(98385..100460) 1 NC_007204.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 100460 thiC 3514674 thiC Psychrobacter arcticus 273-4 thiamine biosynthesis protein ThiC YP_263394.1 98385 R 259536 CDS YP_263395.1 71064668 3514675 complement(100903..101193) 1 NC_007204.1 RBS found.; hypothetical protein 101193 3514675 Psyc_0087 Psychrobacter arcticus 273-4 hypothetical protein YP_263395.1 100903 R 259536 CDS YP_263396.1 71064669 3514676 complement(101502..102875) 1 NC_007204.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 102875 argH 3514676 argH Psychrobacter arcticus 273-4 argininosuccinate lyase YP_263396.1 101502 R 259536 CDS YP_263397.1 71064670 3514677 103385..104422 1 NC_007204.1 hydroxymethylbilane synthase 104422 hemC 3514677 hemC Psychrobacter arcticus 273-4 hydroxymethylbilane synthase YP_263397.1 103385 D 259536 CDS YP_263398.1 71064671 3514678 104539..105522 1 NC_007204.1 uroporphyrinogen-III synthase 105522 hemD 3514678 hemD Psychrobacter arcticus 273-4 uroporphyrinogen-III synthase YP_263398.1 104539 D 259536 CDS YP_263399.1 71064672 3514679 105653..106612 1 NC_007204.1 hypothetical protein 106612 3514679 Psyc_0091 Psychrobacter arcticus 273-4 hypothetical protein YP_263399.1 105653 D 259536 CDS YP_263400.1 71064673 3514680 106671..107156 1 NC_007204.1 hypothetical protein 107156 3514680 Psyc_0092 Psychrobacter arcticus 273-4 hypothetical protein YP_263400.1 106671 D 259536 CDS YP_263401.1 71064674 3514681 complement(107401..108513) 1 NC_007204.1 GTP cyclohydrolase II 108513 ribB 3514681 ribB Psychrobacter arcticus 273-4 GTP cyclohydrolase II YP_263401.1 107401 R 259536 CDS YP_263402.1 71064675 3514682 complement(108765..110054) 1 NC_007204.1 recombination factor protein RarA 110054 3514682 Psyc_0094 Psychrobacter arcticus 273-4 recombination factor protein RarA YP_263402.1 108765 R 259536 CDS YP_263403.1 71064676 3514683 110387..110878 1 NC_007204.1 hypothetical protein 110878 3514683 Psyc_0095 Psychrobacter arcticus 273-4 hypothetical protein YP_263403.1 110387 D 259536 CDS YP_263404.1 71064677 3514684 110986..111837 1 NC_007204.1 hypothetical protein 111837 3514684 Psyc_0096 Psychrobacter arcticus 273-4 hypothetical protein YP_263404.1 110986 D 259536 CDS YP_263405.1 71064678 3514685 complement(111902..113182) 1 NC_007204.1 citrate synthase 113182 gltA 3514685 gltA Psychrobacter arcticus 273-4 citrate synthase YP_263405.1 111902 R 259536 CDS YP_263406.1 71064679 3514468 114223..114609 1 NC_007204.1 succinate dehydrogenase subunit C 114609 sdhC 3514468 sdhC Psychrobacter arcticus 273-4 succinate dehydrogenase subunit C YP_263406.1 114223 D 259536 CDS YP_263407.1 71064680 3514469 114609..115013 1 NC_007204.1 succinate dehydrogenase subunit D 115013 sdhD 3514469 sdhD Psychrobacter arcticus 273-4 succinate dehydrogenase subunit D YP_263407.1 114609 D 259536 CDS YP_263408.1 71064681 3514470 115192..117042 1 NC_007204.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 117042 sdhA 3514470 sdhA Psychrobacter arcticus 273-4 succinate dehydrogenase flavoprotein subunit YP_263408.1 115192 D 259536 CDS YP_263409.1 71064682 3514471 117251..117961 1 NC_007204.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 117961 sdhB 3514471 sdhB Psychrobacter arcticus 273-4 succinate dehydrogenase iron-sulfur subunit YP_263409.1 117251 D 259536 CDS YP_263410.1 71064683 3514472 119047..121932 1 NC_007204.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 121932 sucA 3514472 sucA Psychrobacter arcticus 273-4 2-oxoglutarate dehydrogenase E1 YP_263410.1 119047 D 259536 CDS YP_263411.1 71064684 3514473 122097..123329 1 NC_007204.1 2-oxoglutarate dehydrogenase E2 123329 sucB 3514473 sucB Psychrobacter arcticus 273-4 2-oxoglutarate dehydrogenase E2 YP_263411.1 122097 D 259536 CDS YP_263412.1 71064685 3514474 123590..125041 1 NC_007204.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 125041 lpdG 3514474 lpdG Psychrobacter arcticus 273-4 dihydrolipoamide dehydrogenase YP_263412.1 123590 D 259536 CDS YP_263413.1 71064686 3514475 125228..126394 1 NC_007204.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 126394 sucC 3514475 sucC Psychrobacter arcticus 273-4 succinyl-CoA synthetase subunit beta YP_263413.1 125228 D 259536 CDS YP_263414.1 71064687 3514476 126500..127375 1 NC_007204.1 succinyl-CoA synthetase subunit alpha 127375 3514476 Psyc_0106 Psychrobacter arcticus 273-4 succinyl-CoA synthetase subunit alpha YP_263414.1 126500 D 259536 CDS YP_263415.1 71064688 3514477 127483..128514 1 NC_007204.1 UDP-galactose 4-epimerase 128514 galE 3514477 galE Psychrobacter arcticus 273-4 UDP-galactose 4-epimerase YP_263415.1 127483 D 259536 CDS YP_263416.1 71064689 3514478 128569..129453 1 NC_007204.1 UDP-glucose pyrophosphorylase 129453 galU 3514478 galU Psychrobacter arcticus 273-4 UDP-glucose pyrophosphorylase YP_263416.1 128569 D 259536 CDS YP_263417.1 71064690 3514479 129457..131124 1 NC_007204.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 131124 pgi 3514479 pgi Psychrobacter arcticus 273-4 glucose-6-phosphate isomerase YP_263417.1 129457 D 259536 CDS YP_263418.1 71064691 3514480 131165..132595 1 NC_007204.1 hypothetical protein 132595 3514480 Psyc_0110 Psychrobacter arcticus 273-4 hypothetical protein YP_263418.1 131165 D 259536 CDS YP_263419.1 71064692 3514481 complement(132855..134336) 1 NC_007204.1 phosphomannomutase 134336 cpsG 3514481 cpsG Psychrobacter arcticus 273-4 phosphomannomutase YP_263419.1 132855 R 259536 CDS YP_263420.1 71064693 3514482 134490..135356 1 NC_007204.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 135356 mazG 3514482 mazG Psychrobacter arcticus 273-4 nucleoside triphosphate pyrophosphohydrolase YP_263420.1 134490 D 259536 CDS YP_263421.1 71064694 3514483 135367..135714 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.995) with cleavage site probability 0.936 at residue 24; competence DNA binding protein ComEA 135714 comEA 3514483 comEA Psychrobacter arcticus 273-4 competence DNA binding protein ComEA YP_263421.1 135367 D 259536 CDS YP_263422.1 71064695 3514484 135879..138116 1 NC_007204.1 hypothetical protein 138116 3514484 Psyc_0114 Psychrobacter arcticus 273-4 hypothetical protein YP_263422.1 135879 D 259536 CDS YP_263423.1 71064696 3514485 138151..138732 1 NC_007204.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 138732 folK 3514485 folK Psychrobacter arcticus 273-4 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_263423.1 138151 D 259536 CDS YP_263424.1 71064697 3514486 138792..139592 1 NC_007204.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 139592 panB 3514486 panB Psychrobacter arcticus 273-4 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_263424.1 138792 D 259536 CDS YP_263425.1 71064698 3514487 139644..140510 1 NC_007204.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 140510 panC 3514487 panC Psychrobacter arcticus 273-4 pantoate--beta-alanine ligase YP_263425.1 139644 D 259536 CDS YP_263426.1 71064699 3514722 140567..141529 1 NC_007204.1 hypothetical protein 141529 3514722 Psyc_0118 Psychrobacter arcticus 273-4 hypothetical protein YP_263426.1 140567 D 259536 CDS YP_263427.1 71064700 3514723 141597..142109 1 NC_007204.1 hypothetical protein 142109 3514723 Psyc_0119 Psychrobacter arcticus 273-4 hypothetical protein YP_263427.1 141597 D 259536 CDS YP_263428.1 71064701 3514724 complement(142426..143046) 1 NC_007204.1 hypothetical protein 143046 3514724 Psyc_0120 Psychrobacter arcticus 273-4 hypothetical protein YP_263428.1 142426 R 259536 CDS YP_263429.1 71064702 3514725 143562..144392 1 NC_007204.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 144392 ubiG 3514725 ubiG Psychrobacter arcticus 273-4 3-demethylubiquinone-9 3-methyltransferase YP_263429.1 143562 D 259536 CDS YP_263430.1 71064703 3514726 144428..145138 1 NC_007204.1 haloacid dehalogenase 145138 3514726 Psyc_0122 Psychrobacter arcticus 273-4 haloacid dehalogenase YP_263430.1 144428 D 259536 CDS YP_263431.1 71064704 3514727 145243..146130 1 NC_007204.1 short chain dehydrogenase 146130 3514727 Psyc_0123 Psychrobacter arcticus 273-4 short chain dehydrogenase YP_263431.1 145243 D 259536 CDS YP_263432.1 71064705 3514728 146254..146520 1 NC_007204.1 Citation: Brown L, Gentry D, Elliott T, Cashel M (2002). DksA affects ppGpp induction of RpoS at a translational level. J Bacteriol 184(16);4455-65. PMID: 12142416; hypothetical protein 146520 3514728 Psyc_0124 Psychrobacter arcticus 273-4 hypothetical protein YP_263432.1 146254 D 259536 CDS YP_263433.1 71064706 3514729 complement(146719..147828) 1 NC_007204.1 This protein shows low homology to the cobalamin synthesis protein/P47K family (PFAM cobW). No RBS was found.; hypothetical protein 147828 3514729 Psyc_0125 Psychrobacter arcticus 273-4 hypothetical protein YP_263433.1 146719 R 259536 CDS YP_263434.1 71064707 3514730 complement(147959..148723) 1 NC_007204.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 148723 ompR 3514730 ompR Psychrobacter arcticus 273-4 osmolarity response regulator YP_263434.1 147959 R 259536 CDS YP_263435.1 71064708 3514731 149143..151665 1 NC_007204.1 hypothetical protein 151665 3514731 Psyc_0127 Psychrobacter arcticus 273-4 hypothetical protein YP_263435.1 149143 D 259536 CDS YP_263436.1 71064709 3514732 complement(151802..152296) 1 NC_007204.1 hypothetical protein 152296 3514732 Psyc_0128 Psychrobacter arcticus 273-4 hypothetical protein YP_263436.1 151802 R 259536 CDS YP_263437.1 71064710 3514733 complement(152743..154041) 1 NC_007204.1 RBS found.; hypothetical protein 154041 3514733 Psyc_0129 Psychrobacter arcticus 273-4 hypothetical protein YP_263437.1 152743 R 259536 CDS YP_263438.1 71064711 3514734 154478..154633 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.198 at residue 28; hypothetical protein 154633 3514734 Psyc_0130 Psychrobacter arcticus 273-4 hypothetical protein YP_263438.1 154478 D 259536 CDS YP_263439.1 71064712 3514735 complement(154919..155212) 1 NC_007204.1 pterin-4-alpha-carbinolamine dehydratase 155212 phhB 3514735 phhB Psychrobacter arcticus 273-4 pterin-4-alpha-carbinolamine dehydratase YP_263439.1 154919 R 259536 CDS YP_263440.1 71064713 3514736 complement(155523..155816) 1 NC_007204.1 RBS found.; hypothetical protein 155816 3514736 Psyc_0132 Psychrobacter arcticus 273-4 hypothetical protein YP_263440.1 155523 R 259536 CDS YP_263441.1 71064714 3514737 156306..157967 1 NC_007204.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 157967 3514737 Psyc_0133 Psychrobacter arcticus 273-4 ABC transporter ATP-binding protein YP_263441.1 156306 D 259536 CDS YP_263442.1 71064715 3514738 complement(158102..160894) 1 NC_007204.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 160894 3514738 Psyc_0134 Psychrobacter arcticus 273-4 glycerol-3-phosphate acyltransferase YP_263442.1 158102 R 259536 CDS YP_263443.1 71064716 3514739 161278..161766 1 NC_007204.1 hypothetical protein 161766 3514739 Psyc_0135 Psychrobacter arcticus 273-4 hypothetical protein YP_263443.1 161278 D 259536 CDS YP_263444.1 71064717 3514740 161842..162216 1 NC_007204.1 hypothetical protein 162216 3514740 Psyc_0136 Psychrobacter arcticus 273-4 hypothetical protein YP_263444.1 161842 D 259536 CDS YP_263445.1 71064718 3514503 complement(162300..164120) 1 NC_007204.1 acyl-CoA dehydrogenase 164120 3514503 Psyc_0137 Psychrobacter arcticus 273-4 acyl-CoA dehydrogenase YP_263445.1 162300 R 259536 CDS YP_263446.1 71064719 3514504 164664..165791 1 NC_007204.1 hypothetical protein 165791 3514504 Psyc_0138 Psychrobacter arcticus 273-4 hypothetical protein YP_263446.1 164664 D 259536 CDS YP_263447.1 71064720 3514505 complement(165855..166721) 1 NC_007204.1 shikimate dehydrogenase 166721 aroE 3514505 aroE Psychrobacter arcticus 273-4 shikimate dehydrogenase YP_263447.1 165855 R 259536 CDS YP_263448.1 71064721 3514506 167146..167811 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.990) with cleavage site probability 0.982 at residue 24; hypothetical protein 167811 3514506 Psyc_0140 Psychrobacter arcticus 273-4 hypothetical protein YP_263448.1 167146 D 259536 CDS YP_263449.1 71064722 3514507 167815..168774 1 NC_007204.1 aminodeoxychorismate lyase 168774 3514507 Psyc_0141 Psychrobacter arcticus 273-4 aminodeoxychorismate lyase YP_263449.1 167815 D 259536 CDS YP_263450.1 71064723 3514508 complement(168785..168985) 1 NC_007204.1 hypothetical protein 168985 3514508 Psyc_0142 Psychrobacter arcticus 273-4 hypothetical protein YP_263450.1 168785 R 259536 CDS YP_263451.1 71064724 3514509 complement(169265..170029) 1 NC_007204.1 type II restriction endonuclease DpnI 170029 dpnC 3514509 dpnC Psychrobacter arcticus 273-4 type II restriction endonuclease DpnI YP_263451.1 169265 R 259536 CDS YP_263452.1 71064725 3514510 170201..171484 1 NC_007204.1 hypothetical protein 171484 3514510 Psyc_0144 Psychrobacter arcticus 273-4 hypothetical protein YP_263452.1 170201 D 259536 CDS YP_263453.1 71064726 3514511 171585..172262 1 NC_007204.1 thymidylate kinase 172262 tmk 3514511 tmk Psychrobacter arcticus 273-4 thymidylate kinase YP_263453.1 171585 D 259536 CDS YP_263454.1 71064727 3514512 complement(172382..174673) 1 NC_007204.1 CPA1 family Na(+)/H(+) antiporter 174673 3514512 Psyc_0146 Psychrobacter arcticus 273-4 CPA1 family Na(+)/H(+) antiporter YP_263454.1 172382 R 259536 CDS YP_263455.1 71064728 3514513 175485..176942 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.993) with cleavage site probability 0.989 at residue 47; serine protease 176942 mucD 3514513 mucD Psychrobacter arcticus 273-4 serine protease YP_263455.1 175485 D 259536 CDS YP_263456.1 71064729 3514514 177480..178385 1 NC_007204.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 178385 dapA 3514514 dapA Psychrobacter arcticus 273-4 dihydrodipicolinate synthase YP_263456.1 177480 D 259536 CDS YP_263457.1 71064730 3514515 178400..178735 1 NC_007204.1 hypothetical protein 178735 3514515 Psyc_0149 Psychrobacter arcticus 273-4 hypothetical protein YP_263457.1 178400 D 259536 CDS YP_263458.1 71064731 3514516 178866..179579 1 NC_007204.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 179579 purC 3514516 purC Psychrobacter arcticus 273-4 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_263458.1 178866 D 259536 CDS YP_263459.1 71064732 3514517 complement(179656..179997) 1 NC_007204.1 hypothetical protein 179997 3514517 Psyc_0151 Psychrobacter arcticus 273-4 hypothetical protein YP_263459.1 179656 R 259536 CDS YP_263460.1 71064733 3514519 180603..180914 1 NC_007204.1 hypothetical protein 180914 3514519 Psyc_0153 Psychrobacter arcticus 273-4 hypothetical protein YP_263460.1 180603 D 259536 CDS YP_263461.1 71064734 3514520 complement(180969..181190) 1 NC_007204.1 hypothetical protein 181190 3514520 Psyc_0154 Psychrobacter arcticus 273-4 hypothetical protein YP_263461.1 180969 R 259536 CDS YP_263462.1 71064735 3514521 complement(181490..181732) 1 NC_007204.1 hypothetical protein 181732 3514521 Psyc_0155 Psychrobacter arcticus 273-4 hypothetical protein YP_263462.1 181490 R 259536 CDS YP_263463.1 71064736 3515116 complement(181933..182136) 1 NC_007204.1 RBS found.; hypothetical protein 182136 3515116 Psyc_0156 Psychrobacter arcticus 273-4 hypothetical protein YP_263463.1 181933 R 259536 CDS YP_263464.1 71064737 3515117 182604..182855 1 NC_007204.1 hypothetical protein 182855 3515117 Psyc_0157 Psychrobacter arcticus 273-4 hypothetical protein YP_263464.1 182604 D 259536 CDS YP_263465.1 71064738 3515118 complement(182842..184173) 1 NC_007204.1 D-amino acid dehydrogenase subunit 184173 dadA 3515118 dadA Psychrobacter arcticus 273-4 D-amino acid dehydrogenase subunit YP_263465.1 182842 R 259536 CDS YP_263466.1 71064739 3515119 complement(184228..184995) 1 NC_007204.1 hypothetical protein 184995 3515119 Psyc_0159 Psychrobacter arcticus 273-4 hypothetical protein YP_263466.1 184228 R 259536 CDS YP_263467.1 71064740 3515120 185292..185645 1 NC_007204.1 Phosphonoacetate hydrolase PhnA is a novel carbon-phosphorus bond cleavage enzyme. The phnA gene is part of a large operon in Escherichia coli associated with alkylphosphonate uptake and carbon-phosphorus bond cleavage.; PhnA protein 185645 phnA 3515120 phnA Psychrobacter arcticus 273-4 PhnA protein YP_263467.1 185292 D 259536 CDS YP_263468.1 71064741 3515121 185744..187045 1 NC_007204.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 187045 hemL 3515121 hemL Psychrobacter arcticus 273-4 glutamate-1-semialdehyde aminotransferase YP_263468.1 185744 D 259536 CDS YP_263469.1 71064742 3515122 187480..189006 1 NC_007204.1 exopolyphosphatase 189006 3515122 Psyc_0162 Psychrobacter arcticus 273-4 exopolyphosphatase YP_263469.1 187480 D 259536 CDS YP_263470.1 71064743 3515123 189235..190038 1 NC_007204.1 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 190038 3515123 Psyc_0163 Psychrobacter arcticus 273-4 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_263470.1 189235 D 259536 CDS YP_263471.1 71064744 3515124 190316..191893 1 NC_007204.1 hypothetical protein 191893 3515124 Psyc_0164 Psychrobacter arcticus 273-4 hypothetical protein YP_263471.1 190316 D 259536 CDS YP_263472.1 71064745 3515125 192082..192915 1 NC_007204.1 pyrroline-5-carboxylate reductase 192915 proC 3515125 proC Psychrobacter arcticus 273-4 pyrroline-5-carboxylate reductase YP_263472.1 192082 D 259536 CDS YP_263473.1 71064746 3515126 193038..193607 1 NC_007204.1 hypothetical protein 193607 3515126 Psyc_0166 Psychrobacter arcticus 273-4 hypothetical protein YP_263473.1 193038 D 259536 CDS YP_263474.1 71064747 3515127 complement(193860..194654) 1 NC_007204.1 phosphomethylpyrimidine kinase 194654 thiD 3515127 thiD Psychrobacter arcticus 273-4 phosphomethylpyrimidine kinase YP_263474.1 193860 R 259536 CDS YP_263475.1 71064748 3515130 195455..196129 1 NC_007204.1 hypothetical protein 196129 3515130 Psyc_0168 Psychrobacter arcticus 273-4 hypothetical protein YP_263475.1 195455 D 259536 CDS YP_263476.1 71064749 3515131 complement(196376..196756) 1 NC_007204.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 196756 panD 3515131 panD Psychrobacter arcticus 273-4 aspartate alpha-decarboxylase YP_263476.1 196376 R 259536 CDS YP_263477.1 71064750 3515132 complement(196856..197437) 1 NC_007204.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 197437 pth 3515132 pth Psychrobacter arcticus 273-4 peptidyl-tRNA hydrolase YP_263477.1 196856 R 259536 CDS YP_263478.1 71064751 3514206 complement(197634..198308) 1 NC_007204.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 198308 3514206 Psyc_0171 Psychrobacter arcticus 273-4 50S ribosomal protein L25 YP_263478.1 197634 R 259536 CDS YP_263479.1 71064752 3514207 complement(198705..199652) 1 NC_007204.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 199652 prsA 3514207 prsA Psychrobacter arcticus 273-4 ribose-phosphate pyrophosphokinase YP_263479.1 198705 R 259536 CDS YP_263480.1 71064753 3514210 complement(200407..201375) 1 NC_007204.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 201375 ipk 3514210 ipk Psychrobacter arcticus 273-4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_263480.1 200407 R 259536 CDS YP_263481.1 71064754 3514211 complement(201438..202076) 1 NC_007204.1 hypothetical protein 202076 3514211 Psyc_0174 Psychrobacter arcticus 273-4 hypothetical protein YP_263481.1 201438 R 259536 CDS YP_263482.1 71064755 3514212 complement(202218..203882) 1 NC_007204.1 hypothetical protein 203882 3514212 Psyc_0175 Psychrobacter arcticus 273-4 hypothetical protein YP_263482.1 202218 R 259536 CDS YP_263483.1 71064756 3514213 204616..205995 1 NC_007204.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 205995 hemA 3514213 hemA Psychrobacter arcticus 273-4 glutamyl-tRNA reductase YP_263483.1 204616 D 259536 CDS YP_263484.1 71064757 3514214 206442..207578 1 NC_007204.1 serine-pyruvate aminotransferase 207578 agxT 3514214 agxT Psychrobacter arcticus 273-4 serine-pyruvate aminotransferase YP_263484.1 206442 D 259536 CDS YP_263485.1 71064758 3514215 207814..208251 1 NC_007204.1 hypothetical protein 208251 3514215 Psyc_0178 Psychrobacter arcticus 273-4 hypothetical protein YP_263485.1 207814 D 259536 CDS YP_263486.1 71064759 3514216 208344..208766 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.953) with cleavage site probability 0.501 at residue 23; hypothetical protein 208766 3514216 Psyc_0179 Psychrobacter arcticus 273-4 hypothetical protein YP_263486.1 208344 D 259536 CDS YP_263487.1 71064760 3514217 complement(208866..210530) 1 NC_007204.1 The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; AMP-dependent synthetase/ligase 210530 3514217 Psyc_0180 Psychrobacter arcticus 273-4 AMP-dependent synthetase/ligase YP_263487.1 208866 R 259536 CDS YP_263488.1 71064761 3514218 210870..213005 1 NC_007204.1 2,4-dienoyl-CoA reductase 213005 fadH2 3514218 fadH2 Psychrobacter arcticus 273-4 2,4-dienoyl-CoA reductase YP_263488.1 210870 D 259536 CDS YP_263489.1 71064762 3514219 213389..214492 1 NC_007204.1 FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; N-ethylmaleimide reductase 214492 nemA 3514219 nemA Psychrobacter arcticus 273-4 N-ethylmaleimide reductase YP_263489.1 213389 D 259536 CDS YP_263490.1 71064763 3514220 complement(214749..216065) 1 NC_007204.1 Member of TIGR00275 family of proteins. RBS found.; hypothetical protein 216065 3514220 Psyc_0183 Psychrobacter arcticus 273-4 hypothetical protein YP_263490.1 214749 R 259536 CDS YP_263491.1 71064764 3514221 216448..218409 1 NC_007204.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 218409 acs 3514221 acs Psychrobacter arcticus 273-4 acetyl-CoA synthetase YP_263491.1 216448 D 259536 CDS YP_263492.1 71064765 3514222 219109..219789 1 NC_007204.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 219789 pgsA 3514222 pgsA Psychrobacter arcticus 273-4 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_263492.1 219109 D 259536 CDS YP_263493.1 71064766 3514522 complement(220074..220568) 1 NC_007204.1 This protein has some homology to general stress protein 26 (COG3871). RBS found.; hypothetical protein 220568 3514522 Psyc_0186 Psychrobacter arcticus 273-4 hypothetical protein YP_263493.1 220074 R 259536 CDS YP_263494.1 71064767 3514523 220986..225014 1 NC_007204.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 225014 purL 3514523 purL Psychrobacter arcticus 273-4 phosphoribosylformylglycinamidine synthase YP_263494.1 220986 D 259536 CDS YP_263495.1 71064768 3514524 225212..225685 1 NC_007204.1 hypothetical protein 225685 3514524 Psyc_0188 Psychrobacter arcticus 273-4 hypothetical protein YP_263495.1 225212 D 259536 CDS YP_263496.1 71064769 3514525 complement(225740..227497) 1 NC_007204.1 hypothetical protein 227497 3514525 Psyc_0189 Psychrobacter arcticus 273-4 hypothetical protein YP_263496.1 225740 R 259536 CDS YP_263497.1 71064770 3514526 227710..227889 1 NC_007204.1 hypothetical protein 227889 3514526 Psyc_0190 Psychrobacter arcticus 273-4 hypothetical protein YP_263497.1 227710 D 259536 CDS YP_263498.1 71064771 3514527 228171..228800 1 NC_007204.1 alkaline phosphatase 228800 3514527 Psyc_0191 Psychrobacter arcticus 273-4 alkaline phosphatase YP_263498.1 228171 D 259536 CDS YP_263499.1 71064772 3514528 complement(229127..229267) 1 NC_007204.1 High homology to COG3328, yet very short sequence.; transposase and inactivated derivatives 229267 3514528 Psyc_0192 Psychrobacter arcticus 273-4 transposase and inactivated derivatives YP_263499.1 229127 R 259536 CDS YP_263500.1 71064773 3514529 complement(229310..230866) 1 NC_007204.1 contains a TerC, 2 CBS and 1 CorC domains; TerC family transport protein 230866 3514529 Psyc_0193 Psychrobacter arcticus 273-4 TerC family transport protein YP_263500.1 229310 R 259536 CDS YP_263501.1 71064774 3514530 complement(231329..231742) 1 NC_007204.1 Member of bacterial family of proteins related to iojap from plants. The gene iojap is a pattern-striping gene in maize. RBS found.; hypothetical protein 231742 3514530 Psyc_0194 Psychrobacter arcticus 273-4 hypothetical protein YP_263501.1 231329 R 259536 CDS YP_263502.1 71064775 3514531 complement(231882..232766) 1 NC_007204.1 nicotinate-nucleotide adenylyltransferase 232766 nadD 3514531 nadD Psychrobacter arcticus 273-4 nicotinate-nucleotide adenylyltransferase YP_263502.1 231882 R 259536 CDS YP_263503.1 71064776 3514532 complement(233099..235255) 1 NC_007204.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 235255 3514532 Psyc_0196 Psychrobacter arcticus 273-4 phosphate acetyltransferase YP_263503.1 233099 R 259536 CDS YP_263504.1 71064777 3514533 complement(235349..236581) 1 NC_007204.1 acetate kinase 236581 3514533 Psyc_0197 Psychrobacter arcticus 273-4 acetate kinase YP_263504.1 235349 R 259536 CDS YP_263505.1 71064778 3514534 237088..237513 1 NC_007204.1 Two transmembrane helices predicted.; hypothetical protein 237513 3514534 Psyc_0198 Psychrobacter arcticus 273-4 hypothetical protein YP_263505.1 237088 D 259536 CDS YP_263506.1 71064779 3514535 237623..238954 1 NC_007204.1 diaminopimelate decarboxylase 238954 lysA 3514535 lysA Psychrobacter arcticus 273-4 diaminopimelate decarboxylase YP_263506.1 237623 D 259536 CDS YP_263507.1 71064780 3514536 239291..240178 1 NC_007204.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 240178 dapF 3514536 dapF Psychrobacter arcticus 273-4 diaminopimelate epimerase YP_263507.1 239291 D 259536 CDS YP_263508.1 71064781 3514537 240236..241273 1 NC_007204.1 tyrosine recombinase XerC 241273 xerC 3514537 xerC Psychrobacter arcticus 273-4 tyrosine recombinase XerC YP_263508.1 240236 D 259536 CDS YP_263509.1 71064782 3514538 complement(241487..242383) 1 NC_007204.1 Hydrolase conserved domain; carbon-nitrogen hydrolase 242383 3514538 Psyc_0202 Psychrobacter arcticus 273-4 carbon-nitrogen hydrolase YP_263509.1 241487 R 259536 CDS YP_263510.1 71064783 3514539 242863..244572 1 NC_007204.1 contain all necessary domains of rpoN except conserved octapeptide with unkown function; Citation: Merrick M.J. In a class of its own--the RNA polymerase sigma factor sigma 54 (sigma N). Mol. Microbiol. 10: 903- 909 (1993) [PubMed: 7934866 ]; RNA polymerase sigma-54 factor family protein 244572 rpoN 3514539 rpoN Psychrobacter arcticus 273-4 RNA polymerase sigma-54 factor family protein YP_263510.1 242863 D 259536 CDS YP_263511.1 71064784 3514540 244975..245355 1 NC_007204.1 encoded adjacently (downstream) from to RpoN (Sigma 54); Citation: Heurlier K et al. J Bacteriol. 2003 Apr;185(7):2227-35. PMID: 12644493 [PubMed - indexed for MEDLINE] 2: Oosthuiz et al. Appl. Environ Microbiol. 2002 Jun;68(6):2770-80. PMID: 12039732 [PubMed - indexed for MEDLINE]; 30S ribosomal protein S30 245355 yfiA 3514540 yfiA Psychrobacter arcticus 273-4 30S ribosomal protein S30 YP_263511.1 244975 D 259536 CDS YP_263512.1 71064785 3514541 complement(245787..245987) 1 NC_007204.1 thiamine biosynthesis sulfur transfer protein 245987 thiS 3514541 thiS Psychrobacter arcticus 273-4 thiamine biosynthesis sulfur transfer protein YP_263512.1 245787 R 259536 CDS YP_263513.1 71064786 3514780 complement(246097..246471) 1 NC_007204.1 Signal peptide and 4 transmembrane helices predicted. RBS found.; hypothetical protein 246471 3514780 Psyc_0206 Psychrobacter arcticus 273-4 hypothetical protein YP_263513.1 246097 R 259536 CDS YP_263514.1 71064787 3514781 complement(246530..247555) 1 NC_007204.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 247555 rpoH 3514781 rpoH Psychrobacter arcticus 273-4 RNA polymerase factor sigma-32 YP_263514.1 246530 R 259536 CDS YP_263515.1 71064788 3514782 complement(247635..248102) 1 NC_007204.1 RBS found.; hypothetical protein 248102 3514782 Psyc_0208 Psychrobacter arcticus 273-4 hypothetical protein YP_263515.1 247635 R 259536 CDS YP_263516.1 71064789 3514783 248494..250179 1 NC_007204.1 hypothetical protein 250179 3514783 Psyc_0209 Psychrobacter arcticus 273-4 hypothetical protein YP_263516.1 248494 D 259536 CDS YP_263517.1 71064790 3514784 complement(250391..250840) 1 NC_007204.1 Possible GatB/Yqey domain (tRNA metabolism). RBS found.; hypothetical protein 250840 3514784 Psyc_0210 Psychrobacter arcticus 273-4 hypothetical protein YP_263517.1 250391 R 259536 CDS YP_263518.1 71064791 3514785 complement(251039..251254) 1 NC_007204.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 251254 rpsU 3514785 rpsU Psychrobacter arcticus 273-4 30S ribosomal protein S21 YP_263518.1 251039 R 259536 CDS YP_263519.1 71064792 3514786 251670..252038 1 NC_007204.1 Signal peptide predicted; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.603 at residue 31; hypothetical protein 252038 3514786 Psyc_0212 Psychrobacter arcticus 273-4 hypothetical protein YP_263519.1 251670 D 259536 CDS YP_263520.1 71064793 3514787 252105..252626 1 NC_007204.1 Cytochrome c domain at c-terminus; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.417 at residue 34; hypothetical protein 252626 3514787 Psyc_0213 Psychrobacter arcticus 273-4 hypothetical protein YP_263520.1 252105 D 259536 CDS YP_263521.1 71064794 3514788 252902..253951 1 NC_007204.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 253951 ygjD 3514788 ygjD Psychrobacter arcticus 273-4 DNA-binding/iron metalloprotein/AP endonuclease YP_263521.1 252902 D 259536 CDS YP_263522.1 71064795 3514789 254011..254382 1 NC_007204.1 camphor resistance protein CrcB 254382 3514789 Psyc_0215 Psychrobacter arcticus 273-4 camphor resistance protein CrcB YP_263522.1 254011 D 259536 CDS YP_263523.1 71064796 3514790 complement(254413..255303) 1 NC_007204.1 All possess a potential HTH DNA-binding motif towards their N-termini.; LysR family transcriptional regulator 255303 metR 3514790 metR Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_263523.1 254413 R 259536 CDS YP_263524.1 71064797 3514791 255969..256607 1 NC_007204.1 carbonic anhydrase 256607 3514791 Psyc_0217 Psychrobacter arcticus 273-4 carbonic anhydrase YP_263524.1 255969 D 259536 CDS YP_263525.1 71064798 3514792 256690..257259 1 NC_007204.1 lactoylglutathione lyase 257259 gloA 3514792 gloA Psychrobacter arcticus 273-4 lactoylglutathione lyase YP_263525.1 256690 D 259536 CDS YP_263526.1 71064799 3514793 complement(257347..258357) 1 NC_007204.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 258357 hemF 3514793 hemF Psychrobacter arcticus 273-4 coproporphyrinogen III oxidase YP_263526.1 257347 R 259536 CDS YP_263527.1 71064800 3514794 complement(258376..259068) 1 NC_007204.1 GTP cyclohydrolase II 259068 ribA 3514794 ribA Psychrobacter arcticus 273-4 GTP cyclohydrolase II YP_263527.1 258376 R 259536 CDS YP_263528.1 71064801 3514795 259652..261694 1 NC_007204.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 261694 dxs 3514795 dxs Psychrobacter arcticus 273-4 1-deoxy-D-xylulose-5-phosphate synthase YP_263528.1 259652 D 259536 CDS YP_263529.1 71064802 3514796 262183..263010 1 NC_007204.1 inositol monophosphatase 263010 suhB 3514796 suhB Psychrobacter arcticus 273-4 inositol monophosphatase YP_263529.1 262183 D 259536 CDS YP_263530.1 71064803 3514797 complement(263057..264484) 1 NC_007204.1 diacylglycerol O-acyltransferase 264484 3514797 Psyc_0223 Psychrobacter arcticus 273-4 diacylglycerol O-acyltransferase YP_263530.1 263057 R 259536 CDS YP_263531.1 71064804 3514798 complement(264531..265355) 1 NC_007204.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 265355 thiG 3514798 thiG Psychrobacter arcticus 273-4 thiazole synthase YP_263531.1 264531 R 259536 CDS YP_263532.1 71064805 3514705 complement(265553..266287) 1 NC_007204.1 hypothetical protein 266287 3514705 Psyc_0225 Psychrobacter arcticus 273-4 hypothetical protein YP_263532.1 265553 R 259536 CDS YP_263533.1 71064806 3514706 266672..268168 1 NC_007204.1 endonuclease 268168 3514706 Psyc_0226 Psychrobacter arcticus 273-4 endonuclease YP_263533.1 266672 D 259536 CDS YP_263534.1 71064807 3514707 268184..269728 1 NC_007204.1 hypothetical protein 269728 3514707 Psyc_0227 Psychrobacter arcticus 273-4 hypothetical protein YP_263534.1 268184 D 259536 CDS YP_263535.1 71064808 3514711 270938..272026 1 NC_007204.1 hypothetical protein 272026 3514711 Psyc_0228 Psychrobacter arcticus 273-4 hypothetical protein YP_263535.1 270938 D 259536 CDS YP_263536.1 71064809 3514714 276220..277656 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.980 at residue 48; outer membrane phospholipase A 277656 pldA 3514714 pldA Psychrobacter arcticus 273-4 outer membrane phospholipase A YP_263536.1 276220 D 259536 CDS YP_263537.1 71064810 3514715 277687..278529 1 NC_007204.1 competence protein F 278529 comF 3514715 comF Psychrobacter arcticus 273-4 competence protein F YP_263537.1 277687 D 259536 CDS YP_263538.1 71064811 3514716 278992..279450 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.751) with cleavage site probability 0.319 at residue 26; type IV pilin protein 279450 fimT 3514716 fimT Psychrobacter arcticus 273-4 type IV pilin protein YP_263538.1 278992 D 259536 CDS YP_263539.1 71064812 3514717 279450..280100 1 NC_007204.1 type IV fimbrial biogenesis protein PilV 280100 pilV 3514717 pilV Psychrobacter arcticus 273-4 type IV fimbrial biogenesis protein PilV YP_263539.1 279450 D 259536 CDS YP_263540.1 71064813 3515078 280100..281011 1 NC_007204.1 pilus assembly protein PilW 281011 3515078 Psyc_0235 Psychrobacter arcticus 273-4 pilus assembly protein PilW YP_263540.1 280100 D 259536 CDS YP_263541.1 71064814 3515079 281023..281841 1 NC_007204.1 pilus assembly protein PilX 281841 3515079 Psyc_0236 Psychrobacter arcticus 273-4 pilus assembly protein PilX YP_263541.1 281023 D 259536 CDS YP_263542.1 71064815 3515080 281921..285676 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.426 at residue 35; pilus assembly protein tip-associated adhesin PilY1 285676 3515080 Psyc_0237 Psychrobacter arcticus 273-4 pilus assembly protein tip-associated adhesin PilY1 YP_263542.1 281921 D 259536 CDS YP_263543.1 71064816 3515081 285723..286310 1 NC_007204.1 pilus assembly protein PilE 286310 3515081 Psyc_0238 Psychrobacter arcticus 273-4 pilus assembly protein PilE YP_263543.1 285723 D 259536 CDS YP_263544.1 71064817 3515082 286310..286747 1 NC_007204.1 pilus assembly protein PilE 286747 pilE 3515082 pilE Psychrobacter arcticus 273-4 pilus assembly protein PilE YP_263544.1 286310 D 259536 CDS YP_263545.1 71064818 3515083 287088..287507 1 NC_007204.1 pilus assembly protein major pilin PilA 287507 3515083 Psyc_0240 Psychrobacter arcticus 273-4 pilus assembly protein major pilin PilA YP_263545.1 287088 D 259536 CDS YP_263546.1 71064819 3515084 287641..288054 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.652) with cleavage site probability 0.517 at residue 33; pilus assembly protein major pilin PilA 288054 3515084 Psyc_0241 Psychrobacter arcticus 273-4 pilus assembly protein major pilin PilA YP_263546.1 287641 D 259536 CDS YP_263547.1 71064820 3515085 288187..289947 1 NC_007204.1 hypothetical protein 289947 3515085 Psyc_0242 Psychrobacter arcticus 273-4 hypothetical protein YP_263547.1 288187 D 259536 CDS YP_263548.1 71064821 3515086 complement(290109..290645) 1 NC_007204.1 Possible transposase and inactivated derivatives (COG1943).; hypothetical protein 290645 3515086 Psyc_0243 Psychrobacter arcticus 273-4 hypothetical protein YP_263548.1 290109 R 259536 CDS YP_263549.1 71064822 3515088 complement(290940..291641) 1 NC_007204.1 hypothetical protein 291641 3515088 Psyc_0245 Psychrobacter arcticus 273-4 hypothetical protein YP_263549.1 290940 R 259536 CDS YP_263550.1 71064823 3515089 complement(291832..292155) 1 NC_007204.1 ferredoxin 292155 3515089 Psyc_0246 Psychrobacter arcticus 273-4 ferredoxin YP_263550.1 291832 R 259536 CDS YP_263551.1 71064824 3515090 complement(292249..295425) 1 NC_007204.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 295425 mutS 3515090 mutS Psychrobacter arcticus 273-4 DNA mismatch repair protein MutS YP_263551.1 292249 R 259536 CDS YP_263552.1 71064825 3515091 295988..298777 1 NC_007204.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 298777 secA 3515091 secA Psychrobacter arcticus 273-4 preprotein translocase subunit SecA YP_263552.1 295988 D 259536 CDS YP_263553.1 71064826 3515092 299100..299612 1 NC_007204.1 Signal peptide predicted; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.986) with cleavage site probability 0.971 at residue 28; hypothetical protein 299612 3515092 Psyc_0249 Psychrobacter arcticus 273-4 hypothetical protein YP_263553.1 299100 D 259536 CDS YP_263554.1 71064827 3515093 complement(299711..300379) 1 NC_007204.1 hypothetical protein 300379 3515093 Psyc_0250 Psychrobacter arcticus 273-4 hypothetical protein YP_263554.1 299711 R 259536 CDS YP_263555.1 71064828 3515094 complement(300687..301541) 1 NC_007204.1 PRC barrel domain present; hypothetical protein 301541 3515094 Psyc_0251 Psychrobacter arcticus 273-4 hypothetical protein YP_263555.1 300687 R 259536 CDS YP_263556.1 71064829 3515095 complement(302075..303256) 1 NC_007204.1 acetyl-CoA acyltransferase 303256 3515095 Psyc_0252 Psychrobacter arcticus 273-4 acetyl-CoA acyltransferase YP_263556.1 302075 R 259536 CDS YP_263557.1 71064830 3514113 complement(303315..304661) 1 NC_007204.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 304661 hom 3514113 hom Psychrobacter arcticus 273-4 homoserine dehydrogenase YP_263557.1 303315 R 259536 CDS YP_263558.1 71064831 3514114 complement(304875..305732) 1 NC_007204.1 Citation: Proc Natl Acad Sci U S A. 1992 Jul 1;89(13):6210-4. http://www.cf.ac.uk/biosi/staff/ehrmann/tools/ecce/Peripla smicBySize.html; thiol:disulfide interchange protein 305732 dsbC 3514114 dsbC Psychrobacter arcticus 273-4 thiol:disulfide interchange protein YP_263558.1 304875 R 259536 CDS YP_263559.1 71064832 3514115 306144..307067 1 NC_007204.1 hypothetical protein 307067 3514115 Psyc_0255 Psychrobacter arcticus 273-4 hypothetical protein YP_263559.1 306144 D 259536 CDS YP_263560.1 71064833 3514116 complement(307312..311529) 1 NC_007204.1 RNAse E 311529 3514116 Psyc_0256 Psychrobacter arcticus 273-4 RNAse E YP_263560.1 307312 R 259536 CDS YP_263561.1 71064834 3514117 312743..313759 1 NC_007204.1 ribosomal large subunit pseudouridine synthase C 313759 rlu 3514117 rlu Psychrobacter arcticus 273-4 ribosomal large subunit pseudouridine synthase C YP_263561.1 312743 D 259536 CDS YP_263562.1 71064835 3514118 313900..314607 1 NC_007204.1 could also have efflux ability; phosphoglycolate phosphatase 314607 3514118 Psyc_0258 Psychrobacter arcticus 273-4 phosphoglycolate phosphatase YP_263562.1 313900 D 259536 CDS YP_263563.1 71064836 3514119 complement(314697..315605) 1 NC_007204.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 315605 engB 3514119 engB Psychrobacter arcticus 273-4 ribosome biogenesis GTP-binding protein YsxC YP_263563.1 314697 R 259536 CDS YP_263564.1 71064837 3514120 315892..316227 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.911 at residue 35; cytochrome c, class I 316227 scyA 3514120 scyA Psychrobacter arcticus 273-4 cytochrome c, class I YP_263564.1 315892 D 259536 CDS YP_263565.1 71064838 3514121 316570..317238 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.999 at residue 20; cytochrome C, c4 317238 cc4 3514121 cc4 Psychrobacter arcticus 273-4 cytochrome C, c4 YP_263565.1 316570 D 259536 CDS YP_263566.1 71064839 3514122 317468..318610 1 NC_007204.1 Possible Na+ dependent transporter of the SNF family. Signal peptide and 11 transmembrane helices predicted.; hypothetical protein 318610 3514122 Psyc_0262 Psychrobacter arcticus 273-4 hypothetical protein YP_263566.1 317468 D 259536 CDS YP_263567.1 71064840 3514123 318598..319002 1 NC_007204.1 hypothetical protein 319002 3514123 Psyc_0263 Psychrobacter arcticus 273-4 hypothetical protein YP_263567.1 318598 D 259536 CDS YP_263568.1 71064841 3514124 complement(319028..319444) 1 NC_007204.1 outer membrane lipoprotein OmlA 319444 omlA 3514124 omlA Psychrobacter arcticus 273-4 outer membrane lipoprotein OmlA YP_263568.1 319028 R 259536 CDS YP_263569.1 71064842 3514125 319768..320202 1 NC_007204.1 ferric-uptake regulator family 320202 fur 3514125 fur Psychrobacter arcticus 273-4 ferric-uptake regulator family YP_263569.1 319768 D 259536 CDS YP_263570.1 71064843 3514126 complement(320393..321514) 1 NC_007204.1 twitching motility protein PilU 321514 pilU 3514126 pilU Psychrobacter arcticus 273-4 twitching motility protein PilU YP_263570.1 320393 R 259536 CDS YP_263571.1 71064844 3514127 complement(321690..322742) 1 NC_007204.1 pilus retraction protein PilT 322742 pilT 3514127 pilT Psychrobacter arcticus 273-4 pilus retraction protein PilT YP_263571.1 321690 R 259536 CDS YP_263572.1 71064845 3514128 323058..323813 1 NC_007204.1 hypothetical protein 323813 3514128 Psyc_0268 Psychrobacter arcticus 273-4 hypothetical protein YP_263572.1 323058 D 259536 CDS YP_263573.1 71064846 3514129 complement(324062..325336) 1 NC_007204.1 Transporter associated domain and two CBS domains present. RBS found. Signal peptide and 4 transmembrane helices predicted.; hypothetical protein 325336 3514129 Psyc_0269 Psychrobacter arcticus 273-4 hypothetical protein YP_263573.1 324062 R 259536 CDS YP_263574.1 71064847 3514130 complement(325581..327284) 1 NC_007204.1 NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase 327284 nadE 3514130 nadE Psychrobacter arcticus 273-4 NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase YP_263574.1 325581 R 259536 CDS YP_263575.1 71064848 3514131 328065..329204 1 NC_007204.1 hypothetical protein 329204 3514131 Psyc_0271 Psychrobacter arcticus 273-4 hypothetical protein YP_263575.1 328065 D 259536 CDS YP_263576.1 71064849 3514132 329289..330443 1 NC_007204.1 erythronate-4-phosphate dehydrogenase 330443 3514132 Psyc_0272 Psychrobacter arcticus 273-4 erythronate-4-phosphate dehydrogenase YP_263576.1 329289 D 259536 CDS YP_263577.1 71064850 3514167 330504..331532 1 NC_007204.1 lysyl-tRNA synthetase, class II 331532 lysS/U 3514167 lysS/U Psychrobacter arcticus 273-4 lysyl-tRNA synthetase, class II YP_263577.1 330504 D 259536 CDS YP_263578.1 71064851 3514168 complement(331821..332270) 1 NC_007204.1 RBS found.; hypothetical protein 332270 3514168 Psyc_0274 Psychrobacter arcticus 273-4 hypothetical protein YP_263578.1 331821 R 259536 CDS YP_263579.1 71064852 3514169 complement(332270..333625) 1 NC_007204.1 phosphoribosylaminoimidazole carboxylase 333625 purK 3514169 purK Psychrobacter arcticus 273-4 phosphoribosylaminoimidazole carboxylase YP_263579.1 332270 R 259536 CDS YP_263580.1 71064853 3514170 complement(333860..334420) 1 NC_007204.1 phosphoribosylaminoimidazole carboxylase catalytic subunit 334420 purE 3514170 purE Psychrobacter arcticus 273-4 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_263580.1 333860 R 259536 CDS YP_263581.1 71064854 3514171 complement(334660..335631) 1 NC_007204.1 Possible protein serine-threonine phosphatase domain.; hypothetical protein 335631 3514171 Psyc_0277 Psychrobacter arcticus 273-4 hypothetical protein YP_263581.1 334660 R 259536 CDS YP_263582.1 71064855 3514172 complement(335859..336467) 1 NC_007204.1 6 transmembrane domains; rhomboid family protein 336467 3514172 Psyc_0278 Psychrobacter arcticus 273-4 rhomboid family protein YP_263582.1 335859 R 259536 CDS YP_263583.1 71064856 3514173 336924..338426 1 NC_007204.1 hypothetical protein 338426 3514173 Psyc_0279 Psychrobacter arcticus 273-4 hypothetical protein YP_263583.1 336924 D 259536 CDS YP_263584.1 71064857 3514174 338964..340565 1 NC_007204.1 OmpA family outer membrane protein 340565 3514174 Psyc_0280 Psychrobacter arcticus 273-4 OmpA family outer membrane protein YP_263584.1 338964 D 259536 CDS YP_263585.1 71064858 3514175 complement(340828..341910) 1 NC_007204.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 341910 3514175 Psyc_0281 Psychrobacter arcticus 273-4 beta-hexosaminidase YP_263585.1 340828 R 259536 CDS YP_263586.1 71064859 3514176 342390..344603 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.994) with cleavage site probability 0.884 at residue 33; peptidase 344603 prc 3514176 prc Psychrobacter arcticus 273-4 peptidase YP_263586.1 342390 D 259536 CDS YP_263587.1 71064860 3514177 complement(345101..345586) 1 NC_007204.1 FKBP-type peptidyl-prolyl cis-trans isomerase 345586 slyD 3514177 slyD Psychrobacter arcticus 273-4 FKBP-type peptidyl-prolyl cis-trans isomerase YP_263587.1 345101 R 259536 CDS YP_263588.1 71064861 3514178 346048..348033 1 NC_007204.1 protease 348033 3514178 Psyc_0284 Psychrobacter arcticus 273-4 protease YP_263588.1 346048 D 259536 CDS YP_263589.1 71064862 3514179 complement(348127..348966) 1 NC_007204.1 hypothetical protein 348966 3514179 Psyc_0285 Psychrobacter arcticus 273-4 hypothetical protein YP_263589.1 348127 R 259536 CDS YP_263590.1 71064863 3514180 complement(349170..349796) 1 NC_007204.1 ribosomal large subunit pseudouridine synthase E 349796 rsu 3514180 rsu Psychrobacter arcticus 273-4 ribosomal large subunit pseudouridine synthase E YP_263590.1 349170 R 259536 CDS YP_263591.1 71064864 3514181 complement(350508..352727) 1 NC_007204.1 isocitrate dehydrogenase 352727 icd2 3514181 icd2 Psychrobacter arcticus 273-4 isocitrate dehydrogenase YP_263591.1 350508 R 259536 CDS YP_263592.1 71064865 3514182 353534..354886 1 NC_007204.1 hypothetical protein 354886 3514182 Psyc_0288 Psychrobacter arcticus 273-4 hypothetical protein YP_263592.1 353534 D 259536 CDS YP_263593.1 71064866 3514183 354939..355445 1 NC_007204.1 chorismate lyase 355445 ubiC 3514183 ubiC Psychrobacter arcticus 273-4 chorismate lyase YP_263593.1 354939 D 259536 CDS YP_263594.1 71064867 3514184 355846..357102 1 NC_007204.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 357102 glyA 3514184 glyA Psychrobacter arcticus 273-4 serine hydroxymethyltransferase YP_263594.1 355846 D 259536 CDS YP_263595.1 71064868 3514185 complement(357352..357726) 1 NC_007204.1 hypothetical protein 357726 3514185 Psyc_0291 Psychrobacter arcticus 273-4 hypothetical protein YP_263595.1 357352 R 259536 CDS YP_263596.1 71064869 3515096 complement(357728..358471) 1 NC_007204.1 Citation: Nucleic Acids Res. 1992 Jun 11;20(11):2861-4.; guanine-specific ribonuclease 358471 3515096 Psyc_0292 Psychrobacter arcticus 273-4 guanine-specific ribonuclease YP_263596.1 357728 R 259536 CDS YP_263597.1 71064870 3515097 complement(358637..359938) 1 NC_007204.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 359938 proA 3515097 proA Psychrobacter arcticus 273-4 gamma-glutamyl phosphate reductase YP_263597.1 358637 R 259536 CDS YP_263598.1 71064871 3515098 360599..361396 1 NC_007204.1 basic amino acid ABC transporter ATPase subunit 361396 3515098 Psyc_0294 Psychrobacter arcticus 273-4 basic amino acid ABC transporter ATPase subunit YP_263598.1 360599 D 259536 CDS YP_263599.1 71064872 3515099 361873..362673 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.394 at residue 25; basic amino acid ABC transporter periplasmic binding protein 362673 3515099 Psyc_0295 Psychrobacter arcticus 273-4 basic amino acid ABC transporter periplasmic binding protein YP_263599.1 361873 D 259536 CDS YP_263600.1 71064873 3515100 362760..363689 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.968) with cleavage site probability 0.651 at residue 34; basic amino acid ABC transporter periplasmic binding protein 363689 3515100 Psyc_0296 Psychrobacter arcticus 273-4 basic amino acid ABC transporter periplasmic binding protein YP_263600.1 362760 D 259536 CDS YP_263601.1 71064874 3515101 364285..365019 1 NC_007204.1 basic amino acid ABC transporter inner membrane protein 365019 3515101 Psyc_0297 Psychrobacter arcticus 273-4 basic amino acid ABC transporter inner membrane protein YP_263601.1 364285 D 259536 CDS YP_263602.1 71064875 3515102 365033..365758 1 NC_007204.1 basic amino acid ABC transporter inner membrane protein 365758 3515102 Psyc_0298 Psychrobacter arcticus 273-4 basic amino acid ABC transporter inner membrane protein YP_263602.1 365033 D 259536 CDS YP_263603.1 71064876 3515103 365857..366573 1 NC_007204.1 fumarylacetoacetate (FAA) hydrolase 366573 3515103 Psyc_0299 Psychrobacter arcticus 273-4 fumarylacetoacetate (FAA) hydrolase YP_263603.1 365857 D 259536 CDS YP_263604.1 71064877 3515104 366970..369171 1 NC_007204.1 phosphatase 369171 3515104 Psyc_0300 Psychrobacter arcticus 273-4 phosphatase YP_263604.1 366970 D 259536 CDS YP_263605.1 71064878 3515105 369539..371005 1 NC_007204.1 Esterase/lipase/thioesterase active site present.; hypothetical protein 371005 3515105 Psyc_0301 Psychrobacter arcticus 273-4 hypothetical protein YP_263605.1 369539 D 259536 CDS YP_263606.1 71064879 3515106 complement(371127..372107) 1 NC_007204.1 heat shock protein, Hsp33 372107 3515106 Psyc_0302 Psychrobacter arcticus 273-4 heat shock protein, Hsp33 YP_263606.1 371127 R 259536 CDS YP_263607.1 71064880 3515107 372590..373549 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.565 at residue 33; glutamate/aspartate ABC transporter periplasmic binding protein GltI 373549 gltI 3515107 gltI Psychrobacter arcticus 273-4 glutamate/aspartate ABC transporter periplasmic binding protein GltI YP_263607.1 372590 D 259536 CDS YP_263608.1 71064881 3515108 373659..374405 1 NC_007204.1 glutamate/aspartate ABC transporter inner membrane protein GltJ 374405 gltJ 3515108 gltJ Psychrobacter arcticus 273-4 glutamate/aspartate ABC transporter inner membrane protein GltJ YP_263608.1 373659 D 259536 CDS YP_263609.1 71064882 3515109 374402..375073 1 NC_007204.1 glutamate/aspartate ABC transporter inner membrane protein GltK 375073 gltK 3515109 gltK Psychrobacter arcticus 273-4 glutamate/aspartate ABC transporter inner membrane protein GltK YP_263609.1 374402 D 259536 CDS YP_263610.1 71064883 3515110 375161..375979 1 NC_007204.1 glutamate/aspartate ABC transporter inner membrane protein GltL 375979 gltL 3515110 gltL Psychrobacter arcticus 273-4 glutamate/aspartate ABC transporter inner membrane protein GltL YP_263610.1 375161 D 259536 CDS YP_263611.1 71064884 3515111 376375..377634 1 NC_007204.1 pyridine nucleotide-disulfide oxidoreductase 377634 3515111 Psyc_0307 Psychrobacter arcticus 273-4 pyridine nucleotide-disulfide oxidoreductase YP_263611.1 376375 D 259536 CDS YP_263612.1 71064885 3515112 377883..379637 1 NC_007204.1 activates fatty acids by binding to coenzyme A; AMP-binding protein 379637 3515112 Psyc_0308 Psychrobacter arcticus 273-4 AMP-binding protein YP_263612.1 377883 D 259536 CDS YP_263613.1 71064886 3515113 379861..381471 1 NC_007204.1 acyl-CoA carboxylase subunit beta 381471 3515113 Psyc_0309 Psychrobacter arcticus 273-4 acyl-CoA carboxylase subunit beta YP_263613.1 379861 D 259536 CDS YP_263614.1 71064887 3515114 381521..382327 1 NC_007204.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 382327 3515114 Psyc_0310 Psychrobacter arcticus 273-4 enoyl-CoA hydratase YP_263614.1 381521 D 259536 CDS YP_263615.1 71064888 3515115 382457..384577 1 NC_007204.1 3-methylcrotonoyl-CoA carboxylase subunit alpha 384577 3515115 Psyc_0311 Psychrobacter arcticus 273-4 3-methylcrotonoyl-CoA carboxylase subunit alpha YP_263615.1 382457 D 259536 CDS YP_263616.1 71064889 3514542 384592..385512 1 NC_007204.1 hydroxymethylglutaryl-CoA lyase 385512 mvaB 3514542 mvaB Psychrobacter arcticus 273-4 hydroxymethylglutaryl-CoA lyase YP_263616.1 384592 D 259536 CDS YP_263617.1 71064890 3514543 385592..386779 1 NC_007204.1 isovaleryl-CoA dehydrogenase 386779 acd 3514543 acd Psychrobacter arcticus 273-4 isovaleryl-CoA dehydrogenase YP_263617.1 385592 D 259536 CDS YP_263618.1 71064891 3514544 complement(386881..387609) 1 NC_007204.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 387609 3514544 Psyc_0314 Psychrobacter arcticus 273-4 pantothenate kinase YP_263618.1 386881 R 259536 CDS YP_263619.1 71064892 3514545 complement(387647..388621) 1 NC_007204.1 biotin-(acetyl CoA carboxylase) holoenzyme synthetase 388621 birA 3514545 birA Psychrobacter arcticus 273-4 biotin-(acetyl CoA carboxylase) holoenzyme synthetase YP_263619.1 387647 R 259536 CDS YP_263620.1 71064893 3514547 389517..390452 1 NC_007204.1 hypothetical protein 390452 3514547 Psyc_0317 Psychrobacter arcticus 273-4 hypothetical protein YP_263620.1 389517 D 259536 CDS YP_263621.1 71064894 3514548 390525..394448 1 NC_007204.1 Citation: Hirano T. 1998. SMC protein complexes and higher-order chromosome dynamics. Curr Opin Cell Biol. 10:317-322.; condensin subunit Smc 394448 smc 3514548 smc Psychrobacter arcticus 273-4 condensin subunit Smc YP_263621.1 390525 D 259536 CDS YP_263622.1 71064895 3514549 394653..395678 1 NC_007204.1 cell division protein 395678 zipA 3514549 zipA Psychrobacter arcticus 273-4 cell division protein YP_263622.1 394653 D 259536 CDS YP_263623.1 71064896 3514550 396012..398087 1 NC_007204.1 This protein also contains a BRCT domain (predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage).; Citation: Lee JY, Chang C, Song HK, Moon J, Yang JK, Kim HK, Kwon ST, Suh SW. 2000. Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications. EMBO J. 19:1119-1129.; NAD dependent DNA ligase 398087 lig 3514550 lig Psychrobacter arcticus 273-4 NAD dependent DNA ligase YP_263623.1 396012 D 259536 CDS YP_263624.1 71064897 3514551 complement(398321..399016) 1 NC_007204.1 hypothetical protein 399016 3514551 Psyc_0321 Psychrobacter arcticus 273-4 hypothetical protein YP_263624.1 398321 R 259536 CDS YP_263625.1 71064898 3514552 complement(399055..399876) 1 NC_007204.1 hypothetical protein 399876 3514552 Psyc_0322 Psychrobacter arcticus 273-4 hypothetical protein YP_263625.1 399055 R 259536 CDS YP_263626.1 71064899 3514553 complement(400165..400695) 1 NC_007204.1 hypothetical protein 400695 3514553 Psyc_0323 Psychrobacter arcticus 273-4 hypothetical protein YP_263626.1 400165 R 259536 CDS YP_263627.1 71064900 3514554 complement(401246..403693) 1 NC_007204.1 hypothetical protein 403693 3514554 Psyc_0324 Psychrobacter arcticus 273-4 hypothetical protein YP_263627.1 401246 R 259536 CDS YP_263628.1 71064901 3514555 complement(404366..404842) 1 NC_007204.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 404842 smpB 3514555 smpB Psychrobacter arcticus 273-4 SsrA-binding protein YP_263628.1 404366 R 259536 CDS YP_263629.1 71064902 3514556 405107..405619 1 NC_007204.1 phosphopantetheine adenylyltransferase 405619 coaD 3514556 coaD Psychrobacter arcticus 273-4 phosphopantetheine adenylyltransferase YP_263629.1 405107 D 259536 CDS YP_263630.1 71064903 3514557 405692..405940 1 NC_007204.1 4Fe-4S ferredoxin 405940 3514557 Psyc_0327 Psychrobacter arcticus 273-4 4Fe-4S ferredoxin YP_263630.1 405692 D 259536 CDS YP_263631.1 71064904 3514558 405944..407254 1 NC_007204.1 aminotransferase 407254 bioA 3514558 bioA Psychrobacter arcticus 273-4 aminotransferase YP_263631.1 405944 D 259536 CDS YP_263632.1 71064905 3514559 407266..407985 1 NC_007204.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 407985 bioD 3514559 bioD Psychrobacter arcticus 273-4 dithiobiotin synthetase YP_263632.1 407266 D 259536 CDS YP_263633.1 71064906 3515047 409080..410876 1 NC_007204.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 410876 lepA 3515047 lepA Psychrobacter arcticus 273-4 GTP-binding protein LepA YP_263633.1 409080 D 259536 CDS YP_263634.1 71064907 3515048 410955..411857 1 NC_007204.1 signal peptidase I 411857 lepB 3515048 lepB Psychrobacter arcticus 273-4 signal peptidase I YP_263634.1 410955 D 259536 CDS YP_263635.1 71064908 3515049 412018..412413 1 NC_007204.1 One transmembrane helix predicted.; hypothetical protein 412413 3515049 Psyc_0332 Psychrobacter arcticus 273-4 hypothetical protein YP_263635.1 412018 D 259536 CDS YP_263636.1 71064909 3515050 412567..413364 1 NC_007204.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 413364 rnc 3515050 rnc Psychrobacter arcticus 273-4 ribonuclease III YP_263636.1 412567 D 259536 CDS YP_263637.1 71064910 3515051 413679..414671 1 NC_007204.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 414671 era 3515051 era Psychrobacter arcticus 273-4 GTP-binding protein Era YP_263637.1 413679 D 259536 CDS YP_263638.1 71064911 3515052 414720..415484 1 NC_007204.1 DNA replication and repair protein RecO 415484 recO 3515052 recO Psychrobacter arcticus 273-4 DNA replication and repair protein RecO YP_263638.1 414720 D 259536 CDS YP_263639.1 71064912 3515053 415584..416378 1 NC_007204.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 416378 pdxJ 3515053 pdxJ Psychrobacter arcticus 273-4 pyridoxine 5'-phosphate synthase YP_263639.1 415584 D 259536 CDS YP_263640.1 71064913 3515054 complement(416416..417003) 1 NC_007204.1 hypothetical protein 417003 3515054 Psyc_0337 Psychrobacter arcticus 273-4 hypothetical protein YP_263640.1 416416 R 259536 CDS YP_263641.1 71064914 3515055 417594..418778 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.980 at residue 23; hypothetical protein 418778 oprF 3515055 oprF Psychrobacter arcticus 273-4 hypothetical protein YP_263641.1 417594 D 259536 CDS YP_263642.1 71064915 3515056 419133..420980 1 NC_007204.1 regulatory protein TypA or elongation factor Tu 420980 3515056 Psyc_0339 Psychrobacter arcticus 273-4 regulatory protein TypA or elongation factor Tu YP_263642.1 419133 D 259536 CDS YP_263643.1 71064916 3515057 421373..421810 1 NC_007204.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 421810 mscL 3515057 mscL Psychrobacter arcticus 273-4 large-conductance mechanosensitive channel YP_263643.1 421373 D 259536 CDS YP_263644.1 71064917 3515058 complement(421913..422365) 1 NC_007204.1 hypothetical protein 422365 3515058 Psyc_0341 Psychrobacter arcticus 273-4 hypothetical protein YP_263644.1 421913 R 259536 CDS YP_263645.1 71064918 3515059 complement(422692..423621) 1 NC_007204.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 423621 fpg 3515059 fpg Psychrobacter arcticus 273-4 formamidopyrimidine-DNA glycosylase YP_263645.1 422692 R 259536 CDS YP_263646.1 71064919 3515060 complement(423686..426226) 1 NC_007204.1 The two proteins are strongly similar. In many species, a single homolog to SpoT and RelA appears reponsible for both ppGpp synthesis and ppGpp degradation; RelA/SpoT family protein 426226 relA 3515060 relA Psychrobacter arcticus 273-4 RelA/SpoT family protein YP_263646.1 423686 R 259536 CDS YP_263647.1 71064920 3515061 complement(426591..428129) 1 NC_007204.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 428129 rumA 3515061 rumA Psychrobacter arcticus 273-4 23S rRNA 5-methyluridine methyltransferase YP_263647.1 426591 R 259536 CDS YP_263648.1 71064921 3515062 complement(428425..429240) 1 NC_007204.1 hypothetical protein 429240 3515062 Psyc_0345 Psychrobacter arcticus 273-4 hypothetical protein YP_263648.1 428425 R 259536 CDS YP_263649.1 71064922 3514037 complement(429328..430284) 1 NC_007204.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 430284 cysM 3514037 cysM Psychrobacter arcticus 273-4 cysteine synthase B YP_263649.1 429328 R 259536 CDS YP_263650.1 71064923 3514038 430705..434112 1 NC_007204.1 signal transduction histidine kinase sensor 434112 3514038 Psyc_0347 Psychrobacter arcticus 273-4 signal transduction histidine kinase sensor YP_263650.1 430705 D 259536 CDS YP_263651.1 71064924 3514039 434240..435052 1 NC_007204.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 435052 3514039 Psyc_0348 Psychrobacter arcticus 273-4 enoyl-CoA hydratase YP_263651.1 434240 D 259536 CDS YP_263652.1 71064925 3514040 435269..436528 1 NC_007204.1 major facilitator superfamily multi-drug efflux pump 436528 3514040 Psyc_0349 Psychrobacter arcticus 273-4 major facilitator superfamily multi-drug efflux pump YP_263652.1 435269 D 259536 CDS YP_263653.1 71064926 3514041 436838..437632 1 NC_007204.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 437632 rpsB 3514041 rpsB Psychrobacter arcticus 273-4 30S ribosomal protein S2 YP_263653.1 436838 D 259536 CDS YP_263654.1 71064927 3514042 437862..438746 1 NC_007204.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 438746 tsf 3514042 tsf Psychrobacter arcticus 273-4 elongation factor Ts YP_263654.1 437862 D 259536 CDS YP_263655.1 71064928 3514043 complement(438893..439714) 1 NC_007204.1 lytic transglycosylase 439714 3514043 Psyc_0352 Psychrobacter arcticus 273-4 lytic transglycosylase YP_263655.1 438893 R 259536 CDS YP_263656.1 71064929 3514044 complement(440145..440834) 1 NC_007204.1 hypothetical protein 440834 3514044 Psyc_0353 Psychrobacter arcticus 273-4 hypothetical protein YP_263656.1 440145 R 259536 CDS YP_263657.1 71064930 3514045 complement(440866..441294) 1 NC_007204.1 hypothetical protein 441294 3514045 Psyc_0354 Psychrobacter arcticus 273-4 hypothetical protein YP_263657.1 440866 R 259536 CDS YP_263658.1 71064931 3514046 complement(441586..443055) 1 NC_007204.1 GTP - binding protein, phage lambda cII repressor 443055 hflX 3514046 hflX Psychrobacter arcticus 273-4 GTP - binding protein, phage lambda cII repressor YP_263658.1 441586 R 259536 CDS YP_263659.1 71064932 3514047 443633..444433 1 NC_007204.1 lyso-ornithine lipid acyltransferase 444433 plsC 3514047 plsC Psychrobacter arcticus 273-4 lyso-ornithine lipid acyltransferase YP_263659.1 443633 D 259536 CDS YP_263660.1 71064933 3514048 complement(444568..445608) 1 NC_007204.1 oxidoreductase, aldo/keto reductase 445608 3514048 Psyc_0357 Psychrobacter arcticus 273-4 oxidoreductase, aldo/keto reductase YP_263660.1 444568 R 259536 CDS YP_263661.1 71064934 3514049 complement(445651..446148) 1 NC_007204.1 FKBP-type peptidyl-prolyl cis-trans isomerase 446148 3514049 Psyc_0358 Psychrobacter arcticus 273-4 FKBP-type peptidyl-prolyl cis-trans isomerase YP_263661.1 445651 R 259536 CDS YP_263662.1 71064935 3514050 446465..447346 1 NC_007204.1 There are 9 addittional ORFs identical to this one.; IS4 family transposase 447346 3514050 Psyc_0359 Psychrobacter arcticus 273-4 IS4 family transposase YP_263662.1 446465 D 259536 CDS YP_263663.1 71064936 3514051 448233..449150 1 NC_007204.1 Contains TPR repeats, SEL1 subfamily.; hypothetical protein 449150 3514051 Psyc_0360 Psychrobacter arcticus 273-4 hypothetical protein YP_263663.1 448233 D 259536 CDS YP_263664.1 71064937 3514052 complement(449214..449426) 1 NC_007204.1 hypothetical protein 449426 3514052 Psyc_0361 Psychrobacter arcticus 273-4 hypothetical protein YP_263664.1 449214 R 259536 CDS YP_263665.1 71064938 3514053 449893..450381 1 NC_007204.1 hypothetical protein 450381 3514053 Psyc_0362 Psychrobacter arcticus 273-4 hypothetical protein YP_263665.1 449893 D 259536 CDS YP_263666.1 71064939 3514054 complement(450659..451174) 1 NC_007204.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 451174 lspA 3514054 lspA Psychrobacter arcticus 273-4 lipoprotein signal peptidase YP_263666.1 450659 R 259536 CDS YP_263667.1 71064940 3514055 complement(451302..454127) 1 NC_007204.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 454127 ileS 3514055 ileS Psychrobacter arcticus 273-4 isoleucyl-tRNA synthetase YP_263667.1 451302 R 259536 CDS YP_263668.1 71064941 3514434 complement(454611..455174) 1 NC_007204.1 thioredoxin protein 455174 3514434 Psyc_0365 Psychrobacter arcticus 273-4 thioredoxin protein YP_263668.1 454611 R 259536 CDS YP_263669.1 71064942 3514435 complement(455427..457064) 1 NC_007204.1 amidohydrolase 457064 3514435 Psyc_0366 Psychrobacter arcticus 273-4 amidohydrolase YP_263669.1 455427 R 259536 CDS YP_263670.1 71064943 3514436 457612..458244 1 NC_007204.1 hypothetical protein 458244 3514436 Psyc_0367 Psychrobacter arcticus 273-4 hypothetical protein YP_263670.1 457612 D 259536 CDS YP_263671.1 71064944 3514437 complement(458394..459836) 1 NC_007204.1 oxidoreductase, FAD binding 459836 3514437 Psyc_0368 Psychrobacter arcticus 273-4 oxidoreductase, FAD binding YP_263671.1 458394 R 259536 CDS YP_263672.1 71064945 3514438 460224..461450 1 NC_007204.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 461450 serA 3514438 serA Psychrobacter arcticus 273-4 D-3-phosphoglycerate dehydrogenase YP_263672.1 460224 D 259536 CDS YP_263673.1 71064946 3514439 complement(461573..462631) 1 NC_007204.1 hypothetical protein 462631 3514439 Psyc_0370 Psychrobacter arcticus 273-4 hypothetical protein YP_263673.1 461573 R 259536 CDS YP_263674.1 71064947 3514440 complement(462797..463804) 1 NC_007204.1 hypothetical protein 463804 3514440 Psyc_0371 Psychrobacter arcticus 273-4 hypothetical protein YP_263674.1 462797 R 259536 CDS YP_263675.1 71064948 3514441 complement(463898..464140) 1 NC_007204.1 hypothetical protein 464140 3514441 Psyc_0372 Psychrobacter arcticus 273-4 hypothetical protein YP_263675.1 463898 R 259536 CDS YP_263676.1 71064949 3514442 complement(464315..464896) 1 NC_007204.1 hypothetical protein 464896 3514442 Psyc_0373 Psychrobacter arcticus 273-4 hypothetical protein YP_263676.1 464315 R 259536 CDS YP_263677.1 71064950 3514443 complement(465299..465916) 1 NC_007204.1 hypothetical protein 465916 3514443 Psyc_0374 Psychrobacter arcticus 273-4 hypothetical protein YP_263677.1 465299 R 259536 CDS YP_263678.1 71064951 3514444 complement(465913..467250) 1 NC_007204.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 467250 metX 3514444 metX Psychrobacter arcticus 273-4 homoserine O-acetyltransferase YP_263678.1 465913 R 259536 CDS YP_263679.1 71064952 3514445 467731..468750 1 NC_007204.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 468750 hemH 3514445 hemH Psychrobacter arcticus 273-4 ferrochelatase YP_263679.1 467731 D 259536 CDS YP_263680.1 71064953 3514446 complement(468847..469221) 1 NC_007204.1 hypothetical protein 469221 3514446 Psyc_0377 Psychrobacter arcticus 273-4 hypothetical protein YP_263680.1 468847 R 259536 CDS YP_263681.1 71064954 3514447 complement(469527..472397) 1 NC_007204.1 DNA polymerase I 472397 polA 3514447 polA Psychrobacter arcticus 273-4 DNA polymerase I YP_263681.1 469527 R 259536 CDS YP_263682.1 71064955 3514448 complement(472843..473256) 1 NC_007204.1 organic hydroperoxide resistance protein 473256 ohrA 3514448 ohrA Psychrobacter arcticus 273-4 organic hydroperoxide resistance protein YP_263682.1 472843 R 259536 CDS YP_263683.1 71064956 3514449 474234..475829 1 NC_007204.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 475829 prfC 3514449 prfC Psychrobacter arcticus 273-4 peptide chain release factor 3 YP_263683.1 474234 D 259536 CDS YP_263684.1 71064957 3514451 476897..477853 1 NC_007204.1 Forkhead-associated (FHA) domain. The domain is present in a diverse range of proteins, such as kinases, phosphatases, kinesins, transcription factors, RNA-binding proteins and metabolic enzymes which partake in many different cellular processes; hypothetical protein 477853 3514451 Psyc_0382 Psychrobacter arcticus 273-4 hypothetical protein YP_263684.1 476897 D 259536 CDS YP_263685.1 71064958 3513987 479294..480484 1 NC_007204.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 480484 tufBa 3513987 tufBa Psychrobacter arcticus 273-4 elongation factor Tu YP_263685.1 479294 D 259536 CDS YP_263686.1 71064959 3513988 complement(480663..481214) 1 NC_007204.1 hypothetical protein 481214 3513988 Psyc_0384 Psychrobacter arcticus 273-4 hypothetical protein YP_263686.1 480663 R 259536 CDS YP_263687.1 71064960 3513989 481437..481907 1 NC_007204.1 ribosomal-protein-alanine acetyltransferase 481907 rimI 3513989 rimI Psychrobacter arcticus 273-4 ribosomal-protein-alanine acetyltransferase YP_263687.1 481437 D 259536 CDS YP_263688.1 71064961 3513990 complement(481988..482422) 1 NC_007204.1 MerR family transcriptional regulator 482422 3513990 Psyc_0386 Psychrobacter arcticus 273-4 MerR family transcriptional regulator YP_263688.1 481988 R 259536 CDS YP_263689.1 71064962 3513991 complement(482733..483539) 1 NC_007204.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 483539 aat 3513991 aat Psychrobacter arcticus 273-4 leucyl/phenylalanyl-tRNA--protein transferase YP_263689.1 482733 R 259536 CDS YP_263690.1 71064963 3513992 complement(483610..484632) 1 NC_007204.1 thioredoxin reductase 484632 trxB 3513992 trxB Psychrobacter arcticus 273-4 thioredoxin reductase YP_263690.1 483610 R 259536 CDS YP_263691.1 71064964 3513993 485598..488804 1 NC_007204.1 DNA translocase FtsK 488804 ftsK 3513993 ftsK Psychrobacter arcticus 273-4 DNA translocase FtsK YP_263691.1 485598 D 259536 CDS YP_263692.1 71064965 3513994 complement(489143..489631) 1 NC_007204.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 489631 3513994 Psyc_0390 Psychrobacter arcticus 273-4 rRNA large subunit methyltransferase YP_263692.1 489143 R 259536 CDS YP_263693.1 71064966 3513995 complement(489872..490483) 1 NC_007204.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 490483 dnaQ 3513995 dnaQ Psychrobacter arcticus 273-4 DNA polymerase III subunit epsilon YP_263693.1 489872 R 259536 CDS YP_263694.1 71064967 3513996 complement(490541..492499) 1 NC_007204.1 nucleotidyltransferase 492499 3513996 Psyc_0392 Psychrobacter arcticus 273-4 nucleotidyltransferase YP_263694.1 490541 R 259536 CDS YP_263695.1 71064968 3513997 complement(492825..494051) 1 NC_007204.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 494051 3513997 Psyc_0393 Psychrobacter arcticus 273-4 succinyldiaminopimelate transaminase YP_263695.1 492825 R 259536 CDS YP_263696.1 71064969 3513998 494365..495033 1 NC_007204.1 Two transmembrane helices predicted.; hypothetical protein 495033 3513998 Psyc_0394 Psychrobacter arcticus 273-4 hypothetical protein YP_263696.1 494365 D 259536 CDS YP_263697.1 71064970 3514133 complement(495044..497791) 1 NC_007204.1 Senses intracellular glutamine levels via ACT domain; protein-P-II uridylyltransferase 497791 glnD 3514133 glnD Psychrobacter arcticus 273-4 protein-P-II uridylyltransferase YP_263697.1 495044 R 259536 CDS YP_263698.1 71064971 3514134 complement(497967..498761) 1 NC_007204.1 methionine aminopeptidase 498761 map 3514134 map Psychrobacter arcticus 273-4 methionine aminopeptidase YP_263698.1 497967 R 259536 CDS YP_263699.1 71064972 3514135 499186..499533 1 NC_007204.1 Signal peptide predicted.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.716) with cleavage site probability 0.275 at residue 40; hypothetical protein 499533 3514135 Psyc_0397 Psychrobacter arcticus 273-4 hypothetical protein YP_263699.1 499186 D 259536 CDS YP_263700.1 71064973 3514137 500233..500403 1 NC_007204.1 hypothetical protein 500403 3514137 Psyc_0399 Psychrobacter arcticus 273-4 hypothetical protein YP_263700.1 500233 D 259536 CDS YP_263701.1 71064974 3514138 500449..500598 1 NC_007204.1 hypothetical protein 500598 3514138 Psyc_0400 Psychrobacter arcticus 273-4 hypothetical protein YP_263701.1 500449 D 259536 CDS YP_263702.1 71064975 3514139 complement(500671..502233) 1 NC_007204.1 Citation: Lauster R, Trautner TA, Noyer-Weidner M. 1989. Cytosine-specific type II DNA methyltransferases. A conserved enzyme core with variable target-recognizing domains. J Mol Biol. 206(2):305-12.; C-5 cytosine-specific DNA methylase 502233 dcm 3514139 dcm Psychrobacter arcticus 273-4 C-5 cytosine-specific DNA methylase YP_263702.1 500671 R 259536 CDS YP_263703.1 71064976 3514140 502506..503840 1 NC_007204.1 hypothetical protein 503840 3514140 Psyc_0402 Psychrobacter arcticus 273-4 hypothetical protein YP_263703.1 502506 D 259536 CDS YP_263704.1 71064977 3514141 complement(503979..507794) 1 NC_007204.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 507794 metH 3514141 metH Psychrobacter arcticus 273-4 B12-dependent methionine synthase YP_263704.1 503979 R 259536 CDS YP_263705.1 71064978 3514142 508533..509117 1 NC_007204.1 fasciclin domain; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.995) with cleavage site probability 0.457 at residue 22; hypothetical protein 509117 3514142 Psyc_0404 Psychrobacter arcticus 273-4 hypothetical protein YP_263705.1 508533 D 259536 CDS YP_263706.1 71064979 3514143 509429..510031 1 NC_007204.1 fasciclin domain; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.656 at residue 21; hypothetical protein 510031 3514143 Psyc_0405 Psychrobacter arcticus 273-4 hypothetical protein YP_263706.1 509429 D 259536 CDS YP_263707.1 71064980 3514145 511927..512808 1 NC_007204.1 There are 9 addittional ORFs identical to this one.; IS4 family transposase 512808 3514145 Psyc_0407 Psychrobacter arcticus 273-4 IS4 family transposase YP_263707.1 511927 D 259536 CDS YP_263708.1 71064981 3514147 513935..514567 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.858 at residue 34; LemA family protein 514567 3514147 Psyc_0409 Psychrobacter arcticus 273-4 LemA family protein YP_263708.1 513935 D 259536 CDS YP_263709.1 71064982 3514148 514839..515999 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 1.000 at residue 26; hypothetical protein 515999 3514148 Psyc_0410 Psychrobacter arcticus 273-4 hypothetical protein YP_263709.1 514839 D 259536 CDS YP_263710.1 71064983 3515063 516094..516618 1 NC_007204.1 hypothetical protein 516618 3515063 Psyc_0411 Psychrobacter arcticus 273-4 hypothetical protein YP_263710.1 516094 D 259536 CDS YP_263711.1 71064984 3515064 516806..517165 1 NC_007204.1 hypothetical protein 517165 3515064 Psyc_0412 Psychrobacter arcticus 273-4 hypothetical protein YP_263711.1 516806 D 259536 CDS YP_263712.1 71064985 3515066 517955..518836 1 NC_007204.1 There are 9 addittional ORFs identical to this one.; IS4 family transposase 518836 3515066 Psyc_0414 Psychrobacter arcticus 273-4 IS4 family transposase YP_263712.1 517955 D 259536 CDS YP_263713.1 71064986 3515068 520957..522330 1 NC_007204.1 type I restriction-modification system subunit S 522330 3515068 Psyc_0416 Psychrobacter arcticus 273-4 type I restriction-modification system subunit S YP_263713.1 520957 D 259536 CDS YP_263714.1 71064987 3515069 complement(522539..522829) 1 NC_007204.1 hypothetical protein 522829 3515069 Psyc_0417 Psychrobacter arcticus 273-4 hypothetical protein YP_263714.1 522539 R 259536 CDS YP_263715.1 71064988 3515070 523115..523795 1 NC_007204.1 glutathione S-transferase 523795 gst 3515070 gst Psychrobacter arcticus 273-4 glutathione S-transferase YP_263715.1 523115 D 259536 CDS YP_263716.1 71064989 3515071 524327..525019 1 NC_007204.1 hypothetical protein 525019 3515071 Psyc_0419 Psychrobacter arcticus 273-4 hypothetical protein YP_263716.1 524327 D 259536 CDS YP_263717.1 71064990 3515072 524974..526065 1 NC_007204.1 hypothetical protein 526065 3515072 Psyc_0420 Psychrobacter arcticus 273-4 hypothetical protein YP_263717.1 524974 D 259536 CDS YP_263718.1 71064991 3515073 complement(526062..527150) 1 NC_007204.1 Part of the pathway of flavonoids, stilbene and lignin biosynthesis.; chalcone synthase 527150 3515073 Psyc_0421 Psychrobacter arcticus 273-4 chalcone synthase YP_263718.1 526062 R 259536 CDS YP_263719.1 71064992 3515074 complement(527278..527538) 1 NC_007204.1 hypothetical protein 527538 3515074 Psyc_0422 Psychrobacter arcticus 273-4 hypothetical protein YP_263719.1 527278 R 259536 CDS YP_263720.1 71064993 3515075 complement(527666..528094) 1 NC_007204.1 transposase ISSod6 528094 3515075 Psyc_0423 Psychrobacter arcticus 273-4 transposase ISSod6 YP_263720.1 527666 R 259536 CDS YP_263721.1 71064994 3515076 528255..531563 1 NC_007204.1 type I restriction enzyme, R subunit 531563 3515076 Psyc_0424 Psychrobacter arcticus 273-4 type I restriction enzyme, R subunit YP_263721.1 528255 D 259536 CDS YP_263722.1 71064995 3514223 531987..532658 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.748 at residue 24; cytochrome C, class I 532658 3514223 Psyc_0425 Psychrobacter arcticus 273-4 cytochrome C, class I YP_263722.1 531987 D 259536 CDS YP_263723.1 71064996 3514224 532980..533927 1 NC_007204.1 ABC transporter ATPase 533927 3514224 Psyc_0426 Psychrobacter arcticus 273-4 ABC transporter ATPase YP_263723.1 532980 D 259536 CDS YP_263724.1 71064997 3514225 534080..534853 1 NC_007204.1 ABC transporter inner membrane subunit 534853 3514225 Psyc_0427 Psychrobacter arcticus 273-4 ABC transporter inner membrane subunit YP_263724.1 534080 D 259536 CDS YP_263725.1 71064998 3514226 535094..535951 1 NC_007204.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 535951 queF 3514226 queF Psychrobacter arcticus 273-4 7-cyano-7-deazaguanine reductase YP_263725.1 535094 D 259536 CDS YP_263726.1 71064999 3514227 complement(536241..537959) 1 NC_007204.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 537959 proS 3514227 proS Psychrobacter arcticus 273-4 prolyl-tRNA synthetase YP_263726.1 536241 R 259536 CDS YP_263727.1 71065000 3514228 complement(538822..540447) 1 NC_007204.1 Citation: Sancar A, Smith FW, Sancar GB. 1984. Purification of Escherichia coli DNA photolyase. J Biol Chem. 259(9):6028-32.; deoxyribodipyrimidine photo-lyase type I 540447 phrB 3514228 phrB Psychrobacter arcticus 273-4 deoxyribodipyrimidine photo-lyase type I YP_263727.1 538822 R 259536 CDS YP_263728.1 71065001 3514229 540585..541268 1 NC_007204.1 phosphoribosylanthranilate isomerase 541268 3514229 Psyc_0431 Psychrobacter arcticus 273-4 phosphoribosylanthranilate isomerase YP_263728.1 540585 D 259536 CDS YP_263729.1 71065002 3514230 541376..542650 1 NC_007204.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 542650 trpB 3514230 trpB Psychrobacter arcticus 273-4 tryptophan synthase subunit beta YP_263729.1 541376 D 259536 CDS YP_263730.1 71065003 3514231 542793..543629 1 NC_007204.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 543629 trpA 3514231 trpA Psychrobacter arcticus 273-4 tryptophan synthase subunit alpha YP_263730.1 542793 D 259536 CDS YP_263731.1 71065004 3514232 543896..544849 1 NC_007204.1 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 544849 accD 3514232 accD Psychrobacter arcticus 273-4 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_263731.1 543896 D 259536 CDS YP_263732.1 71065005 3514233 545092..546459 1 NC_007204.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase FolC 546459 folC 3514233 folC Psychrobacter arcticus 273-4 bifunctional folylpolyglutamate synthase/dihydrofolate synthase FolC YP_263732.1 545092 D 259536 CDS YP_263733.1 71065006 3514234 546690..547805 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.989) with cleavage site probability 0.750 at residue 24; peptidoglycan-binding LysM 547805 lysM 3514234 lysM Psychrobacter arcticus 273-4 peptidoglycan-binding LysM YP_263733.1 546690 D 259536 CDS YP_263734.1 71065007 3514235 548132..548662 1 NC_007204.1 hypothetical protein 548662 3514235 Psyc_0437 Psychrobacter arcticus 273-4 hypothetical protein YP_263734.1 548132 D 259536 CDS YP_263735.1 71065008 3514236 complement(548678..549640) 1 NC_007204.1 Part of a prophage; hypothetical protein 549640 3514236 Psyc_0438 Psychrobacter arcticus 273-4 hypothetical protein YP_263735.1 548678 R 259536 CDS YP_263736.1 71065009 3514237 complement(550211..550699) 1 NC_007204.1 hypothetical protein 550699 3514237 Psyc_0439 Psychrobacter arcticus 273-4 hypothetical protein YP_263736.1 550211 R 259536 CDS YP_263737.1 71065010 3514238 complement(550716..551261) 1 NC_007204.1 N-acetylmuramoyl-L-alanine amidase 551261 3514238 Psyc_0440 Psychrobacter arcticus 273-4 N-acetylmuramoyl-L-alanine amidase YP_263737.1 550716 R 259536 CDS YP_263738.1 71065011 3514239 complement(551327..551650) 1 NC_007204.1 hypothetical protein 551650 3514239 Psyc_0441 Psychrobacter arcticus 273-4 hypothetical protein YP_263738.1 551327 R 259536 CDS YP_263739.1 71065012 3514240 complement(551715..552266) 1 NC_007204.1 hypothetical protein 552266 3514240 Psyc_0442 Psychrobacter arcticus 273-4 hypothetical protein YP_263739.1 551715 R 259536 CDS YP_263740.1 71065013 3514241 complement(552271..555444) 1 NC_007204.1 prophage LambdaSo, host specificity protein J 555444 3514241 Psyc_0443 Psychrobacter arcticus 273-4 prophage LambdaSo, host specificity protein J YP_263740.1 552271 R 259536 CDS YP_263741.1 71065014 3514589 complement(555447..556010) 1 NC_007204.1 phage protein tail protein 556010 3514589 Psyc_0444 Psychrobacter arcticus 273-4 phage protein tail protein YP_263741.1 555447 R 259536 CDS YP_263742.1 71065015 3514590 complement(556066..556815) 1 NC_007204.1 prophage LambdaSo, tail assembly protein K 556815 3514590 Psyc_0445 Psychrobacter arcticus 273-4 prophage LambdaSo, tail assembly protein K YP_263742.1 556066 R 259536 CDS YP_263743.1 71065016 3514591 complement(556815..557633) 1 NC_007204.1 phage minor tail protein 557633 3514591 Psyc_0446 Psychrobacter arcticus 273-4 phage minor tail protein YP_263743.1 556815 R 259536 CDS YP_263744.1 71065017 3514592 complement(557921..559009) 1 NC_007204.1 Within prophage.; RNA-directed DNA polymerase 559009 3514592 Psyc_0447 Psychrobacter arcticus 273-4 RNA-directed DNA polymerase YP_263744.1 557921 R 259536 CDS YP_263745.1 71065018 3514593 complement(559269..559652) 1 NC_007204.1 hypothetical protein 559652 3514593 Psyc_0448 Psychrobacter arcticus 273-4 hypothetical protein YP_263745.1 559269 R 259536 CDS YP_263746.1 71065019 3514594 complement(559678..561144) 1 NC_007204.1 hypothetical protein 561144 3514594 Psyc_0449 Psychrobacter arcticus 273-4 hypothetical protein YP_263746.1 559678 R 259536 CDS YP_263747.1 71065020 3514595 complement(561153..561491) 1 NC_007204.1 LambdaSo, minor tail protein M 561491 3514595 Psyc_0450 Psychrobacter arcticus 273-4 LambdaSo, minor tail protein M YP_263747.1 561153 R 259536 CDS YP_263748.1 71065021 3514596 complement(561553..561825) 1 NC_007204.1 similar to Shewanella oneidensis hypothetical protein SO2991; hypothetical protein 561825 3514596 Psyc_0451 Psychrobacter arcticus 273-4 hypothetical protein YP_263748.1 561553 R 259536 CDS YP_263749.1 71065022 3514597 complement(562011..565082) 1 NC_007204.1 pore-forming tail tip protein 565082 3514597 Psyc_0452 Psychrobacter arcticus 273-4 pore-forming tail tip protein YP_263749.1 562011 R 259536 CDS YP_263750.1 71065023 3514598 complement(565254..565784) 1 NC_007204.1 hypothetical protein 565784 3514598 Psyc_0453 Psychrobacter arcticus 273-4 hypothetical protein YP_263750.1 565254 R 259536 CDS YP_263751.1 71065024 3514599 complement(565850..566074) 1 NC_007204.1 hypothetical protein 566074 3514599 Psyc_0454 Psychrobacter arcticus 273-4 hypothetical protein YP_263751.1 565850 R 259536 CDS YP_263752.1 71065025 3514600 complement(566176..566541) 1 NC_007204.1 hypothetical protein 566541 3514600 Psyc_0455 Psychrobacter arcticus 273-4 hypothetical protein YP_263752.1 566176 R 259536 CDS YP_263753.1 71065026 3514601 complement(566615..567037) 1 NC_007204.1 hypothetical protein 567037 3514601 Psyc_0456 Psychrobacter arcticus 273-4 hypothetical protein YP_263753.1 566615 R 259536 CDS YP_263754.1 71065027 3514602 complement(567059..567418) 1 NC_007204.1 hypothetical protein 567418 3514602 Psyc_0457 Psychrobacter arcticus 273-4 hypothetical protein YP_263754.1 567059 R 259536 CDS YP_263755.1 71065028 3514603 complement(567436..567903) 1 NC_007204.1 Part of a prophage; hypothetical protein 567903 3514603 Psyc_0458 Psychrobacter arcticus 273-4 hypothetical protein YP_263755.1 567436 R 259536 CDS YP_263756.1 71065029 3514604 complement(567896..568228) 1 NC_007204.1 phage head-tail adaptor protein 568228 3514604 Psyc_0459 Psychrobacter arcticus 273-4 phage head-tail adaptor protein YP_263756.1 567896 R 259536 CDS YP_263757.1 71065030 3514605 complement(568230..568538) 1 NC_007204.1 hypothetical protein 568538 3514605 Psyc_0460 Psychrobacter arcticus 273-4 hypothetical protein YP_263757.1 568230 R 259536 CDS YP_263758.1 71065031 3514606 complement(568652..569905) 1 NC_007204.1 major phage capsid subunit 569905 3514606 Psyc_0461 Psychrobacter arcticus 273-4 major phage capsid subunit YP_263758.1 568652 R 259536 CDS YP_263759.1 71065032 3514607 complement(569983..570729) 1 NC_007204.1 prohead peptidase 570729 3514607 Psyc_0462 Psychrobacter arcticus 273-4 prohead peptidase YP_263759.1 569983 R 259536 CDS YP_263760.1 71065033 3514608 complement(570722..571957) 1 NC_007204.1 phage portal protein 571957 3514608 Psyc_0463 Psychrobacter arcticus 273-4 phage portal protein YP_263760.1 570722 R 259536 CDS YP_263761.1 71065034 3514416 complement(571959..573704) 1 NC_007204.1 Often located next to the small subunit.; phage terminase, large subunit 573704 3514416 Psyc_0464 Psychrobacter arcticus 273-4 phage terminase, large subunit YP_263761.1 571959 R 259536 CDS YP_263762.1 71065035 3514417 complement(573711..574184) 1 NC_007204.1 Members tend to be adjacent to the phage terminase large subunit gene.; phage terminase small subunit 574184 3514417 Psyc_0465 Psychrobacter arcticus 273-4 phage terminase small subunit YP_263762.1 573711 R 259536 CDS YP_263763.1 71065036 3514418 complement(574289..574735) 1 NC_007204.1 phage holin protein 574735 3514418 Psyc_0466 Psychrobacter arcticus 273-4 phage holin protein YP_263763.1 574289 R 259536 CDS YP_263764.1 71065037 3514419 complement(574862..575263) 1 NC_007204.1 hypothetical protein 575263 3514419 Psyc_0467 Psychrobacter arcticus 273-4 hypothetical protein YP_263764.1 574862 R 259536 CDS YP_263765.1 71065038 3514420 complement(575616..577316) 1 NC_007204.1 hypothetical protein 577316 3514420 Psyc_0468 Psychrobacter arcticus 273-4 hypothetical protein YP_263765.1 575616 R 259536 CDS YP_263766.1 71065039 3514421 complement(577513..578529) 1 NC_007204.1 Within prophage.; bacteriophage DNA primase 578529 3514421 Psyc_0469 Psychrobacter arcticus 273-4 bacteriophage DNA primase YP_263766.1 577513 R 259536 CDS YP_263767.1 71065040 3514422 complement(578519..579022) 1 NC_007204.1 hypothetical protein 579022 3514422 Psyc_0470 Psychrobacter arcticus 273-4 hypothetical protein YP_263767.1 578519 R 259536 CDS YP_263768.1 71065041 3514423 complement(579064..579318) 1 NC_007204.1 Part of a prophage; hypothetical protein 579318 3514423 Psyc_0471 Psychrobacter arcticus 273-4 hypothetical protein YP_263768.1 579064 R 259536 CDS YP_263769.1 71065042 3514424 579446..580120 1 NC_007204.1 in prophage; helix turn helix motif; Cro/CI family transcriptional regulator 580120 3514424 Psyc_0472 Psychrobacter arcticus 273-4 Cro/CI family transcriptional regulator YP_263769.1 579446 D 259536 CDS YP_263770.1 71065043 3514425 580383..580658 1 NC_007204.1 Within prophage.; hypothetical protein 580658 3514425 Psyc_0473 Psychrobacter arcticus 273-4 hypothetical protein YP_263770.1 580383 D 259536 CDS YP_263771.1 71065044 3514426 580655..581611 1 NC_007204.1 Within prophage.; hypothetical protein 581611 3514426 Psyc_0474 Psychrobacter arcticus 273-4 hypothetical protein YP_263771.1 580655 D 259536 CDS YP_263772.1 71065045 3514427 581604..581957 1 NC_007204.1 Within prophage; hypothetical protein 581957 3514427 Psyc_0475 Psychrobacter arcticus 273-4 hypothetical protein YP_263772.1 581604 D 259536 CDS YP_263773.1 71065046 3514428 581957..582475 1 NC_007204.1 Within prophage, signal peptide predicted.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.726) with cleavage site probability 0.717 at residue 27; hypothetical protein 582475 3514428 Psyc_0476 Psychrobacter arcticus 273-4 hypothetical protein YP_263773.1 581957 D 259536 CDS YP_263774.1 71065047 3514429 582890..583405 1 NC_007204.1 Within prophage, contains ATP/GTP-binding site motif A.; hypothetical protein 583405 3514429 Psyc_0477 Psychrobacter arcticus 273-4 hypothetical protein YP_263774.1 582890 D 259536 CDS YP_263775.1 71065048 3514430 583405..583605 1 NC_007204.1 phage TraR/DksA family protein 583605 3514430 Psyc_0478 Psychrobacter arcticus 273-4 phage TraR/DksA family protein YP_263775.1 583405 D 259536 CDS YP_263776.1 71065049 3514431 584020..585093 1 NC_007204.1 Within prophage.; phage integrase 585093 3514431 Psyc_0479 Psychrobacter arcticus 273-4 phage integrase YP_263776.1 584020 D 259536 CDS YP_263777.1 71065050 3514433 complement(585580..587109) 1 NC_007204.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 587109 gatB 3514433 gatB Psychrobacter arcticus 273-4 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_263777.1 585580 R 259536 CDS YP_263778.1 71065051 3514280 complement(587109..588605) 1 NC_007204.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 588605 gatA 3514280 gatA Psychrobacter arcticus 273-4 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_263778.1 587109 R 259536 CDS YP_263779.1 71065052 3514281 complement(588671..588985) 1 NC_007204.1 aspartyl/glutamyl-tRNA amidotransferase subunit C 588985 gatC 3514281 gatC Psychrobacter arcticus 273-4 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_263779.1 588671 R 259536 CDS YP_263780.1 71065053 3514282 589699..590727 1 NC_007204.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 590727 mreB 3514282 mreB Psychrobacter arcticus 273-4 rod shape-determining protein MreB YP_263780.1 589699 D 259536 CDS YP_263781.1 71065054 3514283 590985..591845 1 NC_007204.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 591845 mreC 3514283 mreC Psychrobacter arcticus 273-4 rod shape-determining protein MreC YP_263781.1 590985 D 259536 CDS YP_263782.1 71065055 3514284 591993..592478 1 NC_007204.1 rod shape-determining protein MreD 592478 mreD 3514284 mreD Psychrobacter arcticus 273-4 rod shape-determining protein MreD YP_263782.1 591993 D 259536 CDS YP_263783.1 71065056 3514285 592618..593313 1 NC_007204.1 maf protein implicated in inhibition of septum formation 593313 maf 3514285 maf Psychrobacter arcticus 273-4 maf protein implicated in inhibition of septum formation YP_263783.1 592618 D 259536 CDS YP_263784.1 71065057 3514286 593525..595111 1 NC_007204.1 RNAse G 595111 3514286 Psyc_0487 Psychrobacter arcticus 273-4 RNAse G YP_263784.1 593525 D 259536 CDS YP_263785.1 71065058 3514287 595612..595923 1 NC_007204.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 595923 rpsJ 3514287 rpsJ Psychrobacter arcticus 273-4 30S ribosomal protein S10 YP_263785.1 595612 D 259536 CDS YP_263786.1 71065059 3514288 595972..596610 1 NC_007204.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 596610 rplC 3514288 rplC Psychrobacter arcticus 273-4 50S ribosomal protein L3 YP_263786.1 595972 D 259536 CDS YP_263787.1 71065060 3514289 596625..597227 1 NC_007204.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 597227 rplD 3514289 rplD Psychrobacter arcticus 273-4 50S ribosomal protein L4 YP_263787.1 596625 D 259536 CDS YP_263788.1 71065061 3514290 597224..597574 1 NC_007204.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 597574 rplW 3514290 rplW Psychrobacter arcticus 273-4 50S ribosomal protein L23 YP_263788.1 597224 D 259536 CDS YP_263789.1 71065062 3514291 597586..598413 1 NC_007204.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 598413 rplB 3514291 rplB Psychrobacter arcticus 273-4 50S ribosomal protein L2 YP_263789.1 597586 D 259536 CDS YP_263790.1 71065063 3514292 598426..598701 1 NC_007204.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 598701 rpsS 3514292 rpsS Psychrobacter arcticus 273-4 30S ribosomal protein S19 YP_263790.1 598426 D 259536 CDS YP_263791.1 71065064 3514293 598712..599041 1 NC_007204.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 599041 rplV 3514293 rplV Psychrobacter arcticus 273-4 50S ribosomal protein L22 YP_263791.1 598712 D 259536 CDS YP_263792.1 71065065 3514294 599045..599773 1 NC_007204.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 599773 rpsC 3514294 rpsC Psychrobacter arcticus 273-4 30S ribosomal protein S3 YP_263792.1 599045 D 259536 CDS YP_263793.1 71065066 3514295 599777..600190 1 NC_007204.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 600190 rplP 3514295 rplP Psychrobacter arcticus 273-4 50S ribosomal protein L16 YP_263793.1 599777 D 259536 CDS YP_263794.1 71065067 3514296 600190..600387 1 NC_007204.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 600387 rpmC 3514296 rpmC Psychrobacter arcticus 273-4 50S ribosomal protein L29 YP_263794.1 600190 D 259536 CDS YP_263795.1 71065068 3514297 600384..600659 1 NC_007204.1 30S ribosomal protein S17 600659 rpsQ 3514297 rpsQ Psychrobacter arcticus 273-4 30S ribosomal protein S17 YP_263795.1 600384 D 259536 CDS YP_263796.1 71065069 3514298 600841..601209 1 NC_007204.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 601209 rplN 3514298 rplN Psychrobacter arcticus 273-4 50S ribosomal protein L14 YP_263796.1 600841 D 259536 CDS YP_263797.1 71065070 3514299 601218..601535 1 NC_007204.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 601535 rplX 3514299 rplX Psychrobacter arcticus 273-4 50S ribosomal protein L24 YP_263797.1 601218 D 259536 CDS YP_263798.1 71065071 3514300 601557..602093 1 NC_007204.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 602093 rplE 3514300 rplE Psychrobacter arcticus 273-4 50S ribosomal protein L5 YP_263798.1 601557 D 259536 CDS YP_263799.1 71065072 3514301 602106..602411 1 NC_007204.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 602411 rpsN 3514301 rpsN Psychrobacter arcticus 273-4 30S ribosomal protein S14 YP_263799.1 602106 D 259536 CDS YP_263800.1 71065073 3514302 602423..602821 1 NC_007204.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 602821 rpsH 3514302 rpsH Psychrobacter arcticus 273-4 30S ribosomal protein S8 YP_263800.1 602423 D 259536 CDS YP_263801.1 71065074 3514303 602997..603530 1 NC_007204.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 603530 rplF 3514303 rplF Psychrobacter arcticus 273-4 50S ribosomal protein L6 YP_263801.1 602997 D 259536 CDS YP_263802.1 71065075 3514304 603542..603892 1 NC_007204.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 603892 rplR 3514304 rplR Psychrobacter arcticus 273-4 50S ribosomal protein L18 YP_263802.1 603542 D 259536 CDS YP_263803.1 71065076 3514305 603895..604410 1 NC_007204.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 604410 rpsE 3514305 rpsE Psychrobacter arcticus 273-4 30S ribosomal protein S5 YP_263803.1 603895 D 259536 CDS YP_263804.1 71065077 3514306 604431..604610 1 NC_007204.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 604610 rpmD 3514306 rpmD Psychrobacter arcticus 273-4 50S ribosomal protein L30 YP_263804.1 604431 D 259536 CDS YP_263805.1 71065078 3514307 604610..605050 1 NC_007204.1 late assembly protein; 50S ribosomal protein L15 605050 rplO 3514307 rplO Psychrobacter arcticus 273-4 50S ribosomal protein L15 YP_263805.1 604610 D 259536 CDS YP_263806.1 71065079 3514308 605070..606401 1 NC_007204.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 606401 secY 3514308 secY Psychrobacter arcticus 273-4 preprotein translocase subunit SecY YP_263806.1 605070 D 259536 CDS YP_263807.1 71065080 3514309 606433..606549 1 NC_007204.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 606549 rpmJ 3514309 rpmJ Psychrobacter arcticus 273-4 50S ribosomal protein L36 YP_263807.1 606433 D 259536 CDS YP_263808.1 71065081 3514310 606807..607163 1 NC_007204.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 607163 rpsM 3514310 rpsM Psychrobacter arcticus 273-4 30S ribosomal protein S13 YP_263808.1 606807 D 259536 CDS YP_263809.1 71065082 3514311 607184..607573 1 NC_007204.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 607573 rpsK 3514311 rpsK Psychrobacter arcticus 273-4 30S ribosomal protein S11 YP_263809.1 607184 D 259536 CDS YP_263810.1 71065083 3514312 607622..608263 1 NC_007204.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 608263 rpsD 3514312 rpsD Psychrobacter arcticus 273-4 30S ribosomal protein S4 YP_263810.1 607622 D 259536 CDS YP_263811.1 71065084 3514313 608345..609352 1 NC_007204.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 609352 rpoA 3514313 rpoA Psychrobacter arcticus 273-4 DNA-directed RNA polymerase subunit alpha YP_263811.1 608345 D 259536 CDS YP_263812.1 71065085 3514314 609372..609731 1 NC_007204.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 609731 rplQ 3514314 rplQ Psychrobacter arcticus 273-4 50S ribosomal protein L17 YP_263812.1 609372 D 259536 CDS YP_263813.1 71065086 3514315 complement(609944..610567) 1 NC_007204.1 Possible RNA binding protein; translation factor SUA5 610567 3514315 Psyc_0516 Psychrobacter arcticus 273-4 translation factor SUA5 YP_263813.1 609944 R 259536 CDS YP_263814.1 71065087 3514316 complement(610764..611561) 1 NC_007204.1 hypothetical protein 611561 3514316 Psyc_0517 Psychrobacter arcticus 273-4 hypothetical protein YP_263814.1 610764 R 259536 CDS YP_263815.1 71065088 3514317 611740..612333 1 NC_007204.1 hypothetical protein 612333 3514317 Psyc_0518 Psychrobacter arcticus 273-4 hypothetical protein YP_263815.1 611740 D 259536 CDS YP_263816.1 71065089 3514318 612666..612848 1 NC_007204.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 612848 rpmF 3514318 rpmF Psychrobacter arcticus 273-4 50S ribosomal protein L32 YP_263816.1 612666 D 259536 CDS YP_263817.1 71065090 3513999 613341..614309 1 NC_007204.1 ACP S-malonyltransferase 614309 fabD 3513999 fabD Psychrobacter arcticus 273-4 ACP S-malonyltransferase YP_263817.1 613341 D 259536 CDS YP_263818.1 71065091 3514000 614306..615034 1 NC_007204.1 3-oxoacyl-ACP reductase 615034 fabG 3514000 fabG Psychrobacter arcticus 273-4 3-oxoacyl-ACP reductase YP_263818.1 614306 D 259536 CDS YP_263819.1 71065092 3514001 615347..615583 1 NC_007204.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 615583 acpP 3514001 acpP Psychrobacter arcticus 273-4 acyl carrier protein YP_263819.1 615347 D 259536 CDS YP_263820.1 71065093 3514002 615874..616380 1 NC_007204.1 peptidoglycan-binding LysM motif; LysM domain/BON superfamily protein 616380 3514002 Psyc_0523 Psychrobacter arcticus 273-4 LysM domain/BON superfamily protein YP_263820.1 615874 D 259536 CDS YP_263821.1 71065094 3514003 complement(616486..617703) 1 NC_007204.1 iron-sulfur binding domain; 4Fe-4S ferredoxin 617703 3514003 Psyc_0524 Psychrobacter arcticus 273-4 4Fe-4S ferredoxin YP_263821.1 616486 R 259536 CDS YP_263822.1 71065095 3514004 617916..619688 1 NC_007204.1 hypothetical protein 619688 3514004 Psyc_0525 Psychrobacter arcticus 273-4 hypothetical protein YP_263822.1 617916 D 259536 CDS YP_263823.1 71065096 3514005 complement(619858..620346) 1 NC_007204.1 hypothetical protein 620346 3514005 Psyc_0526 Psychrobacter arcticus 273-4 hypothetical protein YP_263823.1 619858 R 259536 CDS YP_263824.1 71065097 3514006 621124..622950 1 NC_007204.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; acetolactate synthase 3 catalytic subunit 622950 ilvB 3514006 ilvB Psychrobacter arcticus 273-4 acetolactate synthase 3 catalytic subunit YP_263824.1 621124 D 259536 CDS YP_263825.1 71065098 3514007 622950..623447 1 NC_007204.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 623447 ilvH 3514007 ilvH Psychrobacter arcticus 273-4 acetolactate synthase 3 regulatory subunit YP_263825.1 622950 D 259536 CDS YP_263826.1 71065099 3514008 623594..624610 1 NC_007204.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 624610 ilvC 3514008 ilvC Psychrobacter arcticus 273-4 ketol-acid reductoisomerase YP_263826.1 623594 D 259536 CDS YP_263827.1 71065100 3514009 625016..625441 1 NC_007204.1 Four transmembrane helices predicted.; hypothetical protein 625441 3514009 Psyc_0530 Psychrobacter arcticus 273-4 hypothetical protein YP_263827.1 625016 D 259536 CDS YP_263828.1 71065101 3514010 625818..626030 1 NC_007204.1 Citation: Datta PP, Bhadra RK. Cold shock response and major cold shock proteins of Vibrio cholerae. Appl Environ Microbiol. 2003 Nov;69(11):6361-9. PMID: 14602587 [PubMed - in process]; cold-shock DNA-binding protein family protein 626030 cspA 3514010 cspA Psychrobacter arcticus 273-4 cold-shock DNA-binding protein family protein YP_263828.1 625818 D 259536 CDS YP_263829.1 71065102 3514011 626619..627368 1 NC_007204.1 electron transport flavoprotein beta-subunit 627368 3514011 Psyc_0532 Psychrobacter arcticus 273-4 electron transport flavoprotein beta-subunit YP_263829.1 626619 D 259536 CDS YP_263830.1 71065103 3514012 627500..628432 1 NC_007204.1 electron transportr flavoprotein subunit alpha 628432 etfA 3514012 etfA Psychrobacter arcticus 273-4 electron transportr flavoprotein subunit alpha YP_263830.1 627500 D 259536 CDS YP_263831.1 71065104 3514013 complement(628566..629774) 1 NC_007204.1 transposase mutator family protein 629774 3514013 Psyc_0534 Psychrobacter arcticus 273-4 transposase mutator family protein YP_263831.1 628566 R 259536 CDS YP_263832.1 71065105 3514015 630959..631270 1 NC_007204.1 contains fis type helix turn helix motif suggests binding; IS1329/IS3/IS911 transposase 631270 3514015 Psyc_0536 Psychrobacter arcticus 273-4 IS1329/IS3/IS911 transposase YP_263832.1 630959 D 259536 CDS YP_263833.1 71065106 3514016 631333..632142 1 NC_007204.1 Integrase, catalytic domain; transposase orfAB 632142 3514016 Psyc_0537 Psychrobacter arcticus 273-4 transposase orfAB YP_263833.1 631333 D 259536 CDS YP_263834.1 71065107 3513966 632473..632748 1 NC_007204.1 IS3/IS911 family transposase OrfA 632748 3513966 Psyc_0539 Psychrobacter arcticus 273-4 IS3/IS911 family transposase OrfA YP_263834.1 632473 D 259536 CDS YP_263835.1 71065108 3513967 complement(632966..633772) 1 NC_007204.1 tRNA/rRNA methyltransferase 633772 3513967 Psyc_0540 Psychrobacter arcticus 273-4 tRNA/rRNA methyltransferase YP_263835.1 632966 R 259536 CDS YP_263836.1 71065109 3513968 complement(633876..634859) 1 NC_007204.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 634859 fbp 3513968 fbp Psychrobacter arcticus 273-4 fructose-1,6-bisphosphatase YP_263836.1 633876 R 259536 CDS YP_263837.1 71065110 3513969 635285..636358 1 NC_007204.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 636358 pyrB 3513969 pyrB Psychrobacter arcticus 273-4 aspartate carbamoyltransferase YP_263837.1 635285 D 259536 CDS YP_263838.1 71065111 3513970 636419..637630 1 NC_007204.1 This orf is immediately downstream of a strong pyrB homolog.; Citation: J Bacteriol. 1995 April; 177 (7): 1751-1759; dihydroorotase 637630 pyrC 3513970 pyrC Psychrobacter arcticus 273-4 dihydroorotase YP_263838.1 636419 D 259536 CDS YP_263839.1 71065112 3513971 637563..638186 1 NC_007204.1 4 transmembrane domains predicted; hypothetical protein 638186 3513971 Psyc_0544 Psychrobacter arcticus 273-4 hypothetical protein YP_263839.1 637563 D 259536 CDS YP_263840.1 71065113 3513972 638292..639173 1 NC_007204.1 There are 9 addittional ORFs identical to this one.; IS4 family transposase 639173 3513972 Psyc_0545 Psychrobacter arcticus 273-4 IS4 family transposase YP_263840.1 638292 D 259536 CDS YP_263841.1 71065114 3513973 complement(639265..640539) 1 NC_007204.1 CPA1 family Na(+)/H(+) antiporter 640539 3513973 Psyc_0546 Psychrobacter arcticus 273-4 CPA1 family Na(+)/H(+) antiporter YP_263841.1 639265 R 259536 CDS YP_263842.1 71065115 3513974 complement(640580..642259) 1 NC_007204.1 hypothetical protein 642259 3513974 Psyc_0547 Psychrobacter arcticus 273-4 hypothetical protein YP_263842.1 640580 R 259536 CDS YP_263843.1 71065116 3513975 complement(642397..643974) 1 NC_007204.1 extra 100 aa at carboxy terminus. all 6 transmembrane domains present; tRNA-processing RNAse BN 643974 3513975 Psyc_0548 Psychrobacter arcticus 273-4 tRNA-processing RNAse BN YP_263843.1 642397 R 259536 CDS YP_263844.1 71065117 3513976 644302..644919 1 NC_007204.1 Trp repressor binding protein 644919 trpR 3513976 trpR Psychrobacter arcticus 273-4 Trp repressor binding protein YP_263844.1 644302 D 259536 CDS YP_263845.1 71065118 3513977 644991..645470 1 NC_007204.1 Four transmembrane helices predicted.; hypothetical protein 645470 3513977 Psyc_0550 Psychrobacter arcticus 273-4 hypothetical protein YP_263845.1 644991 D 259536 CDS YP_263846.1 71065119 3513978 complement(645590..646360) 1 NC_007204.1 hypothetical protein 646360 3513978 Psyc_0551 Psychrobacter arcticus 273-4 hypothetical protein YP_263846.1 645590 R 259536 CDS YP_263847.1 71065120 3513979 646903..647193 1 NC_007204.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 647193 groES 3513979 groES Psychrobacter arcticus 273-4 co-chaperonin GroES YP_263847.1 646903 D 259536 CDS YP_263848.1 71065121 3513980 647289..648929 1 NC_007204.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 648929 groEL 3513980 groEL Psychrobacter arcticus 273-4 molecular chaperone GroEL YP_263848.1 647289 D 259536 CDS YP_263849.1 71065122 3513981 complement(649273..650085) 1 NC_007204.1 hypothetical protein 650085 3513981 Psyc_0554 Psychrobacter arcticus 273-4 hypothetical protein YP_263849.1 649273 R 259536 CDS YP_263850.1 71065123 3513982 650559..651716 1 NC_007204.1 pyridine nucleotide transhydrogenase 651716 3513982 Psyc_0555 Psychrobacter arcticus 273-4 pyridine nucleotide transhydrogenase YP_263850.1 650559 D 259536 CDS YP_263851.1 71065124 3513983 651783..652160 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.993) with cleavage site probability 0.936 at residue 22; NAD(P) transhydrogenase subunit alpha 652160 pntA 3513983 pntA Psychrobacter arcticus 273-4 NAD(P) transhydrogenase subunit alpha YP_263851.1 651783 D 259536 CDS YP_263852.1 71065125 3514488 652157..653557 1 NC_007204.1 NAD(P) transhydrogenase subunit beta 653557 pntB 3514488 pntB Psychrobacter arcticus 273-4 NAD(P) transhydrogenase subunit beta YP_263852.1 652157 D 259536 CDS YP_263853.1 71065126 3514489 653710..654264 1 NC_007204.1 hypothetical protein 654264 3514489 Psyc_0558 Psychrobacter arcticus 273-4 hypothetical protein YP_263853.1 653710 D 259536 CDS YP_263854.1 71065127 3514490 654380..654589 1 NC_007204.1 protein of unknown function DUF528; hypothetical protein 654589 3514490 Psyc_0559 Psychrobacter arcticus 273-4 hypothetical protein YP_263854.1 654380 D 259536 CDS YP_263855.1 71065128 3514491 654673..655206 1 NC_007204.1 possible transcriptional activator; hypothetical protein 655206 3514491 Psyc_0560 Psychrobacter arcticus 273-4 hypothetical protein YP_263855.1 654673 D 259536 CDS YP_263856.1 71065129 3514492 complement(655515..656738) 1 NC_007204.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 656738 dapE 3514492 dapE Psychrobacter arcticus 273-4 succinyl-diaminopimelate desuccinylase YP_263856.1 655515 R 259536 CDS YP_263857.1 71065130 3514493 complement(656824..657582) 1 NC_007204.1 oxygenase 657582 3514493 Psyc_0562 Psychrobacter arcticus 273-4 oxygenase YP_263857.1 656824 R 259536 CDS YP_263858.1 71065131 3514494 657712..658587 1 NC_007204.1 hypothetical protein 658587 3514494 Psyc_0563 Psychrobacter arcticus 273-4 hypothetical protein YP_263858.1 657712 D 259536 CDS YP_263859.1 71065132 3514495 658598..659545 1 NC_007204.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 659545 pssA 3514495 pssA Psychrobacter arcticus 273-4 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_263859.1 658598 D 259536 CDS YP_263860.1 71065133 3514501 665969..667639 1 NC_007204.1 hypothetical protein 667639 3514501 Psyc_0565 Psychrobacter arcticus 273-4 hypothetical protein YP_263860.1 665969 D 259536 CDS YP_263861.1 71065134 3514502 667795..668205 1 NC_007204.1 hypothetical protein 668205 3514502 Psyc_0566 Psychrobacter arcticus 273-4 hypothetical protein YP_263861.1 667795 D 259536 CDS YP_263862.1 71065135 3514453 668274..668738 1 NC_007204.1 hypothetical protein 668738 3514453 Psyc_0567 Psychrobacter arcticus 273-4 hypothetical protein YP_263862.1 668274 D 259536 CDS YP_263863.1 71065136 3514454 668799..669449 1 NC_007204.1 strong RBS; hypothetical protein 669449 3514454 Psyc_0568 Psychrobacter arcticus 273-4 hypothetical protein YP_263863.1 668799 D 259536 CDS YP_263864.1 71065137 3514455 complement(669690..670493) 1 NC_007204.1 dienelactone hydrolase 670493 3514455 Psyc_0569 Psychrobacter arcticus 273-4 dienelactone hydrolase YP_263864.1 669690 R 259536 CDS YP_263865.1 71065138 3514456 670925..673012 1 NC_007204.1 catalase 673012 katE 3514456 katE Psychrobacter arcticus 273-4 catalase YP_263865.1 670925 D 259536 CDS YP_263866.1 71065139 3514457 673444..674226 1 NC_007204.1 Zn-dependent hydrolase 674226 3514457 Psyc_0571 Psychrobacter arcticus 273-4 Zn-dependent hydrolase YP_263866.1 673444 D 259536 CDS YP_263867.1 71065140 3514460 complement(675124..677121) 1 NC_007204.1 macrolide ABC transporter ATPase/inner membrane protein 677121 macB 3514460 macB Psychrobacter arcticus 273-4 macrolide ABC transporter ATPase/inner membrane protein YP_263867.1 675124 R 259536 CDS YP_263868.1 71065141 3514461 complement(677216..678583) 1 NC_007204.1 macrolide secretion protein MacA 678583 macA 3514461 macA Psychrobacter arcticus 273-4 macrolide secretion protein MacA YP_263868.1 677216 R 259536 CDS YP_263869.1 71065142 3514462 complement(678929..680005) 1 NC_007204.1 Citation: Song MS, Pham PT, Olson M, Carter JR, Franden MA, Schaaper RM, McHenry CS. 2001. The delta and delta ' subunits of the DNA polymerase III holoenzyme are essential for initiation complex formation and processive elongation. J Biol Chem. 276:35165-35175.; DNA polymerase III subunit delta 680005 holA 3514462 holA Psychrobacter arcticus 273-4 DNA polymerase III subunit delta YP_263869.1 678929 R 259536 CDS YP_263870.1 71065143 3514463 complement(680078..680737) 1 NC_007204.1 possible lipoprotein; hypothetical protein 680737 3514463 Psyc_0575 Psychrobacter arcticus 273-4 hypothetical protein YP_263870.1 680078 R 259536 CDS YP_263871.1 71065144 3514464 complement(680862..683627) 1 NC_007204.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 683627 leuS 3514464 leuS Psychrobacter arcticus 273-4 leucyl-tRNA synthetase YP_263871.1 680862 R 259536 CDS YP_263872.1 71065145 3514465 683738..686623 1 NC_007204.1 pentapeptide repeat motif present; hypothetical protein 686623 3514465 Psyc_0577 Psychrobacter arcticus 273-4 hypothetical protein YP_263872.1 683738 D 259536 CDS YP_263873.1 71065146 3514466 686620..686991 1 NC_007204.1 aresenate reductase arsC related; hypothetical protein 686991 3514466 Psyc_0578 Psychrobacter arcticus 273-4 hypothetical protein YP_263873.1 686620 D 259536 CDS YP_263874.1 71065147 3514467 complement(687068..687979) 1 NC_007204.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 687979 argB 3514467 argB Psychrobacter arcticus 273-4 acetylglutamate kinase YP_263874.1 687068 R 259536 CDS YP_263875.1 71065148 3514187 complement(690109..690573) 1 NC_007204.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 690573 dut 3514187 dut Psychrobacter arcticus 273-4 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_263875.1 690109 R 259536 CDS YP_263876.1 71065149 3514188 complement(690708..692111) 1 NC_007204.1 Mg/Co/Ni transporter MgtE 692111 mgtE 3514188 mgtE Psychrobacter arcticus 273-4 Mg/Co/Ni transporter MgtE YP_263876.1 690708 R 259536 CDS YP_263877.1 71065150 3514189 complement(692360..694393) 1 NC_007204.1 The Rep proteins function as dimers.; ATP-dependent DNA helicase Rep 694393 uvrD 3514189 uvrD Psychrobacter arcticus 273-4 ATP-dependent DNA helicase Rep YP_263877.1 692360 R 259536 CDS YP_263878.1 71065151 3514190 695360..695983 1 NC_007204.1 NADH dehydrogenase I subunit A 695983 nuoA 3514190 nuoA Psychrobacter arcticus 273-4 NADH dehydrogenase I subunit A YP_263878.1 695360 D 259536 CDS YP_263879.1 71065152 3514191 696173..696841 1 NC_007204.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 696841 nuoB 3514191 nuoB Psychrobacter arcticus 273-4 NADH dehydrogenase subunit B YP_263879.1 696173 D 259536 CDS YP_263880.1 71065153 3514192 696972..698747 1 NC_007204.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 698747 nuoD 3514192 nuoD Psychrobacter arcticus 273-4 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_263880.1 696972 D 259536 CDS YP_263881.1 71065154 3514193 698901..699410 1 NC_007204.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 699410 nuoE 3514193 nuoE Psychrobacter arcticus 273-4 NADH dehydrogenase subunit E YP_263881.1 698901 D 259536 CDS YP_263882.1 71065155 3514194 699407..700831 1 NC_007204.1 NADH dehydrogenase I subunit F 700831 nuoF 3514194 nuoF Psychrobacter arcticus 273-4 NADH dehydrogenase I subunit F YP_263882.1 699407 D 259536 CDS YP_263883.1 71065156 3514195 700842..703934 1 NC_007204.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 703934 nuoG 3514195 nuoG Psychrobacter arcticus 273-4 NADH dehydrogenase subunit G YP_263883.1 700842 D 259536 CDS YP_263884.1 71065157 3514196 703936..704979 1 NC_007204.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 704979 nuoH 3514196 nuoH Psychrobacter arcticus 273-4 NADH dehydrogenase subunit H YP_263884.1 703936 D 259536 CDS YP_263885.1 71065158 3514197 705035..705583 1 NC_007204.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 705583 nuoI 3514197 nuoI Psychrobacter arcticus 273-4 NADH dehydrogenase subunit I YP_263885.1 705035 D 259536 CDS YP_263886.1 71065159 3514198 705580..706299 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.676) with cleavage site probability 0.328 at residue 32; NADH dehydrogenase I subunit J 706299 nuoJ 3514198 nuoJ Psychrobacter arcticus 273-4 NADH dehydrogenase I subunit J YP_263886.1 705580 D 259536 CDS YP_263887.1 71065160 3514199 706299..706706 1 NC_007204.1 NADH dehydrogenase I subunit K 706706 nouK 3514199 nouK Psychrobacter arcticus 273-4 NADH dehydrogenase I subunit K YP_263887.1 706299 D 259536 CDS YP_263888.1 71065161 3514200 706711..708585 1 NC_007204.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 708585 nuoL 3514200 nuoL Psychrobacter arcticus 273-4 NADH dehydrogenase subunit L YP_263888.1 706711 D 259536 CDS YP_263889.1 71065162 3514201 708587..710212 1 NC_007204.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 710212 nuoM 3514201 nuoM Psychrobacter arcticus 273-4 NADH dehydrogenase subunit M YP_263889.1 708587 D 259536 CDS YP_263890.1 71065163 3514202 710216..711694 1 NC_007204.1 NADH dehydrogenase I subunit N 711694 nuoN 3514202 nuoN Psychrobacter arcticus 273-4 NADH dehydrogenase I subunit N YP_263890.1 710216 D 259536 CDS YP_263891.1 71065164 3514203 712013..712843 1 NC_007204.1 ferredoxin-NADP reductase 712843 3514203 Psyc_0597 Psychrobacter arcticus 273-4 ferredoxin-NADP reductase YP_263891.1 712013 D 259536 CDS YP_263892.1 71065165 3514204 complement(712969..713775) 1 NC_007204.1 hypothetical protein 713775 3514204 Psyc_0598 Psychrobacter arcticus 273-4 hypothetical protein YP_263892.1 712969 R 259536 CDS YP_263893.1 71065166 3514205 714070..714948 1 NC_007204.1 IS30 family transposase 714948 3514205 Psyc_0599 Psychrobacter arcticus 273-4 IS30 family transposase YP_263893.1 714070 D 259536 CDS YP_263894.1 71065167 3514397 714998..715168 1 NC_007204.1 hypothetical protein 715168 3514397 Psyc_0600 Psychrobacter arcticus 273-4 hypothetical protein YP_263894.1 714998 D 259536 CDS YP_263895.1 71065168 3514398 715517..716998 1 NC_007204.1 MFS nitrate/nitrite transporter 716998 3514398 Psyc_0601 Psychrobacter arcticus 273-4 MFS nitrate/nitrite transporter YP_263895.1 715517 D 259536 CDS YP_263896.1 71065169 3514399 complement(717103..717762) 1 NC_007204.1 nitrate/nitrite response regulator 717762 narL 3514399 narL Psychrobacter arcticus 273-4 nitrate/nitrite response regulator YP_263896.1 717103 R 259536 CDS YP_263897.1 71065170 3514400 complement(717864..719987) 1 NC_007204.1 could also be NarQ unclear but narGHJI present suggesting NarX (Biochem Soc Trans. 2003 Feb;31(Pt 1):1-10.); signal transduction histidine kinase sensor 719987 narX 3514400 narX Psychrobacter arcticus 273-4 signal transduction histidine kinase sensor YP_263897.1 717864 R 259536 CDS YP_263898.1 71065171 3514401 720320..721699 1 NC_007204.1 MFS nitrate/nitrite transporter NarK 721699 narK 3514401 narK Psychrobacter arcticus 273-4 MFS nitrate/nitrite transporter NarK YP_263898.1 720320 D 259536 CDS YP_263899.1 71065172 3514402 722205..725963 1 NC_007204.1 respiratory nitrate reductase subunit alpha apoprotein 725963 narG 3514402 narG Psychrobacter arcticus 273-4 respiratory nitrate reductase subunit alpha apoprotein YP_263899.1 722205 D 259536 CDS YP_263900.1 71065173 3514403 726003..727541 1 NC_007204.1 respiratory nitrate reductase subunit beta 727541 narH 3514403 narH Psychrobacter arcticus 273-4 respiratory nitrate reductase subunit beta YP_263900.1 726003 D 259536 CDS YP_263901.1 71065174 3514404 727543..728412 1 NC_007204.1 respiratory nitrate reductase chaperone NarJ 728412 narJ 3514404 narJ Psychrobacter arcticus 273-4 respiratory nitrate reductase chaperone NarJ YP_263901.1 727543 D 259536 CDS YP_263902.1 71065175 3514405 728427..729152 1 NC_007204.1 respiratory nitrate reductase subunit gamma 729152 narI 3514405 narI Psychrobacter arcticus 273-4 respiratory nitrate reductase subunit gamma YP_263902.1 728427 D 259536 CDS YP_263903.1 71065176 3514406 729309..730340 1 NC_007204.1 peptidyl-prolyl cis-trans isomerase 730340 3514406 Psyc_0609 Psychrobacter arcticus 273-4 peptidyl-prolyl cis-trans isomerase YP_263903.1 729309 D 259536 CDS YP_263904.1 71065177 3514407 730531..731826 1 NC_007204.1 molybdopterin molybdochelatase 731826 moeA 3514407 moeA Psychrobacter arcticus 273-4 molybdopterin molybdochelatase YP_263904.1 730531 D 259536 CDS YP_263905.1 71065178 3514408 732013..733122 1 NC_007204.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 733122 moaA 3514408 moaA Psychrobacter arcticus 273-4 molybdenum cofactor biosynthesis protein A YP_263905.1 732013 D 259536 CDS YP_263906.1 71065179 3514409 733243..733773 1 NC_007204.1 molybdenum cofactor biosynthesis protein 733773 moaB2 3514409 moaB2 Psychrobacter arcticus 273-4 molybdenum cofactor biosynthesis protein YP_263906.1 733243 D 259536 CDS YP_263907.1 71065180 3514410 733766..734563 1 NC_007204.1 Possible Molybdopterin-guanine dinucleotide biosynthesis protein A, MobA.; molybdenum cofactor guanylyltransferase 734563 3514410 Psyc_0613 Psychrobacter arcticus 273-4 molybdenum cofactor guanylyltransferase YP_263907.1 733766 D 259536 CDS YP_263908.1 71065181 3514411 734553..735140 1 NC_007204.1 GTP cyclohydrolase subunit MoaC 735140 moaC 3514411 moaC Psychrobacter arcticus 273-4 GTP cyclohydrolase subunit MoaC YP_263908.1 734553 D 259536 CDS YP_263909.1 71065182 3514412 735201..735464 1 NC_007204.1 molybdopterin converting factor, small subunit 735464 moaD 3514412 moaD Psychrobacter arcticus 273-4 molybdopterin converting factor, small subunit YP_263909.1 735201 D 259536 CDS YP_263910.1 71065183 3514413 735578..736132 1 NC_007204.1 molybdopterin synthase subunit MoaE 736132 moaE 3514413 moaE Psychrobacter arcticus 273-4 molybdopterin synthase subunit MoaE YP_263910.1 735578 D 259536 CDS YP_263911.1 71065184 3514414 736294..737184 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.983) with cleavage site probability 0.975 at residue 43; molybdenum ABC transporter periplasmic binding protein ModA 737184 modA 3514414 modA Psychrobacter arcticus 273-4 molybdenum ABC transporter periplasmic binding protein ModA YP_263911.1 736294 D 259536 CDS YP_263912.1 71065185 3514415 737356..738057 1 NC_007204.1 molybdenum ABC transporter inner membrane protein ModB 738057 modB 3514415 modB Psychrobacter arcticus 273-4 molybdenum ABC transporter inner membrane protein ModB YP_263912.1 737356 D 259536 CDS YP_263913.1 71065186 3514741 complement(738182..738691) 1 NC_007204.1 -capitalized Hypo; hypothetical protein 738691 3514741 Psyc_0619 Psychrobacter arcticus 273-4 hypothetical protein YP_263913.1 738182 R 259536 CDS YP_263914.1 71065187 3514742 738723..739163 1 NC_007204.1 4 transmembrane helices; hypothetical protein 739163 3514742 Psyc_0620 Psychrobacter arcticus 273-4 hypothetical protein YP_263914.1 738723 D 259536 CDS YP_263915.1 71065188 3514743 739307..739723 1 NC_007204.1 probable bacterial transmembrane pair; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.881) with cleavage site probability 0.867 at residue 32; hypothetical protein 739723 3514743 Psyc_0621 Psychrobacter arcticus 273-4 hypothetical protein YP_263915.1 739307 D 259536 CDS YP_263916.1 71065189 3514744 complement(739853..740506) 1 NC_007204.1 DSBA oxidoreductase 740506 3514744 Psyc_0622 Psychrobacter arcticus 273-4 DSBA oxidoreductase YP_263916.1 739853 R 259536 CDS YP_263917.1 71065190 3514746 741705..742676 1 NC_007204.1 hypothetical protein 742676 3514746 Psyc_0624 Psychrobacter arcticus 273-4 hypothetical protein YP_263917.1 741705 D 259536 CDS YP_263918.1 71065191 3514747 742743..743618 1 NC_007204.1 small-conductance mechanosensitive ion channel 743618 3514747 Psyc_0625 Psychrobacter arcticus 273-4 small-conductance mechanosensitive ion channel YP_263918.1 742743 D 259536 CDS YP_263919.1 71065192 3514748 complement(743615..744235) 1 NC_007204.1 hypothetical protein 744235 3514748 Psyc_0626 Psychrobacter arcticus 273-4 hypothetical protein YP_263919.1 743615 R 259536 CDS YP_263920.1 71065193 3514749 complement(744336..745421) 1 NC_007204.1 PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation and belongings to the phosphate regulon (pho) in Escherichia coli; PhoH-like protein, ATPase 745421 3514749 Psyc_0627 Psychrobacter arcticus 273-4 PhoH-like protein, ATPase YP_263920.1 744336 R 259536 CDS YP_263921.1 71065194 3514750 746234..747538 1 NC_007204.1 2-octaprenyl-6-methoxyphenol hydroxylase 747538 ubiH 3514750 ubiH Psychrobacter arcticus 273-4 2-octaprenyl-6-methoxyphenol hydroxylase YP_263921.1 746234 D 259536 CDS YP_263922.1 71065195 3514751 747795..749096 1 NC_007204.1 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 749096 3514751 Psyc_0629 Psychrobacter arcticus 273-4 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_263922.1 747795 D 259536 CDS YP_263923.1 71065196 3514752 complement(749101..750012) 1 NC_007204.1 Membrane protein of unknown function DUF340; hypothetical protein 750012 3514752 Psyc_0630 Psychrobacter arcticus 273-4 hypothetical protein YP_263923.1 749101 R 259536 CDS YP_263924.1 71065197 3514753 complement(750054..751943) 1 NC_007204.1 L-aspartate oxidase 751943 nadB 3514753 nadB Psychrobacter arcticus 273-4 L-aspartate oxidase YP_263924.1 750054 R 259536 CDS YP_263925.1 71065198 3514754 complement(751945..753084) 1 NC_007204.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 753084 nadA 3514754 nadA Psychrobacter arcticus 273-4 quinolinate synthetase YP_263925.1 751945 R 259536 CDS YP_263926.1 71065199 3514755 753357..754451 1 NC_007204.1 hypothetical protein 754451 3514755 Psyc_0633 Psychrobacter arcticus 273-4 hypothetical protein YP_263926.1 753357 D 259536 CDS YP_263927.1 71065200 3514756 754628..755488 1 NC_007204.1 nicotinate-nucleotide pyrophosphorylase 755488 nadC 3514756 nadC Psychrobacter arcticus 273-4 nicotinate-nucleotide pyrophosphorylase YP_263927.1 754628 D 259536 CDS YP_263928.1 71065201 3514757 755911..756516 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.949) with cleavage site probability 0.946 at residue 47; multiple antibiotic resistance (MarC)-like proteins 756516 3514757 Psyc_0635 Psychrobacter arcticus 273-4 multiple antibiotic resistance (MarC)-like proteins YP_263928.1 755911 D 259536 CDS YP_263929.1 71065202 3514758 756847..757113 1 NC_007204.1 IS3 family transposase 757113 3514758 Psyc_0636 Psychrobacter arcticus 273-4 IS3 family transposase YP_263929.1 756847 D 259536 CDS YP_263930.1 71065203 3514759 757185..757934 1 NC_007204.1 transposase OrfB 757934 3514759 Psyc_0637 Psychrobacter arcticus 273-4 transposase OrfB YP_263930.1 757185 D 259536 CDS YP_263931.1 71065204 3514378 complement(758105..760048) 1 NC_007204.1 acyltransferase 760048 3514378 Psyc_0638 Psychrobacter arcticus 273-4 acyltransferase YP_263931.1 758105 R 259536 CDS YP_263932.1 71065205 3514379 760140..760406 1 NC_007204.1 IS3 family transposase 760406 3514379 Psyc_0639 Psychrobacter arcticus 273-4 IS3 family transposase YP_263932.1 760140 D 259536 CDS YP_263933.1 71065206 3514380 760478..761227 1 NC_007204.1 transposase OrfB 761227 3514380 Psyc_0640 Psychrobacter arcticus 273-4 transposase OrfB YP_263933.1 760478 D 259536 CDS YP_263934.1 71065207 3514381 761434..761790 1 NC_007204.1 similar to sp|022008; bactoprenol-linked glucose translocase (flippase) 761790 3514381 Psyc_0641 Psychrobacter arcticus 273-4 bactoprenol-linked glucose translocase (flippase) YP_263934.1 761434 D 259536 CDS YP_263935.1 71065208 3514382 761794..762708 1 NC_007204.1 glycosyl transferase family protein 762708 yfdH 3514382 yfdH Psychrobacter arcticus 273-4 glycosyl transferase family protein YP_263935.1 761794 D 259536 CDS YP_263936.1 71065209 3514383 762710..764374 1 NC_007204.1 hypothetical protein 764374 3514383 Psyc_0643 Psychrobacter arcticus 273-4 hypothetical protein YP_263936.1 762710 D 259536 CDS YP_263937.1 71065210 3514384 764656..764955 1 NC_007204.1 IS3/IS911 family transposase OrfA 764955 3514384 Psyc_0644 Psychrobacter arcticus 273-4 IS3/IS911 family transposase OrfA YP_263937.1 764656 D 259536 CDS YP_263938.1 71065211 3514385 765000..765902 1 NC_007204.1 IS30 family transposase 765902 3514385 Psyc_0645 Psychrobacter arcticus 273-4 IS30 family transposase YP_263938.1 765000 D 259536 CDS YP_263939.1 71065212 3514386 complement(766279..767226) 1 NC_007204.1 ribosomal large subunit pseudouridine synthase B 767226 3514386 Psyc_0646 Psychrobacter arcticus 273-4 ribosomal large subunit pseudouridine synthase B YP_263939.1 766279 R 259536 CDS YP_263940.1 71065213 3514387 767827..768903 1 NC_007204.1 OMA family; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.928 at residue 29; polysaccharide export system, outer membrane component 768903 wza 3514387 wza Psychrobacter arcticus 273-4 polysaccharide export system, outer membrane component YP_263940.1 767827 D 259536 CDS YP_263941.1 71065214 3514388 768923..769354 1 NC_007204.1 protein tyrosine phosphatase 769354 epsP 3514388 epsP Psychrobacter arcticus 273-4 protein tyrosine phosphatase YP_263941.1 768923 D 259536 CDS YP_263942.1 71065215 3514389 769434..771695 1 NC_007204.1 lipopolysaccharide biosynthesis tyrosine kinase 771695 3514389 Psyc_0649 Psychrobacter arcticus 273-4 lipopolysaccharide biosynthesis tyrosine kinase YP_263942.1 769434 D 259536 CDS YP_263943.1 71065216 3514390 771887..773164 1 NC_007204.1 UDP-glucose/GDP-mannose dehydrogenase 773164 3514390 Psyc_0650 Psychrobacter arcticus 273-4 UDP-glucose/GDP-mannose dehydrogenase YP_263943.1 771887 D 259536 CDS YP_263944.1 71065217 3514391 773340..774374 1 NC_007204.1 NAD-dependent epimerase 774374 3514391 Psyc_0651 Psychrobacter arcticus 273-4 NAD-dependent epimerase YP_263944.1 773340 D 259536 CDS YP_263945.1 71065218 3514392 774394..776193 1 NC_007204.1 ABC transporter ATP-binding protein 776193 3514392 Psyc_0652 Psychrobacter arcticus 273-4 ABC transporter ATP-binding protein YP_263945.1 774394 D 259536 CDS YP_263946.1 71065219 3514393 776379..777377 1 NC_007204.1 polysaccharide biosynthesis protein CapD 777377 capD 3514393 capD Psychrobacter arcticus 273-4 polysaccharide biosynthesis protein CapD YP_263946.1 776379 D 259536 CDS YP_263947.1 71065220 3514394 777378..778535 1 NC_007204.1 DegT/DnrJ/EryC1/StrS aminotransferase 778535 3514394 Psyc_0654 Psychrobacter arcticus 273-4 DegT/DnrJ/EryC1/StrS aminotransferase YP_263947.1 777378 D 259536 CDS YP_263948.1 71065221 3514395 778547..779587 1 NC_007204.1 glycosyl transferase family protein 779587 3514395 Psyc_0655 Psychrobacter arcticus 273-4 glycosyl transferase family protein YP_263948.1 778547 D 259536 CDS YP_263949.1 71065222 3514396 779584..780270 1 NC_007204.1 acylneuraminate cytidylyltransferase 780270 neuA2 3514396 neuA2 Psychrobacter arcticus 273-4 acylneuraminate cytidylyltransferase YP_263949.1 779584 D 259536 CDS YP_263950.1 71065223 3514017 780321..781370 1 NC_007204.1 polysaccharide biosynthesis protein 781370 3514017 Psyc_0657 Psychrobacter arcticus 273-4 polysaccharide biosynthesis protein YP_263950.1 780321 D 259536 CDS YP_263951.1 71065224 3514018 781351..781863 1 NC_007204.1 hypothetical protein 781863 3514018 Psyc_0658 Psychrobacter arcticus 273-4 hypothetical protein YP_263951.1 781351 D 259536 CDS YP_263952.1 71065225 3514019 781860..782537 1 NC_007204.1 methionyl-tRNA formyltransferase 782537 3514019 Psyc_0659 Psychrobacter arcticus 273-4 methionyl-tRNA formyltransferase YP_263952.1 781860 D 259536 CDS YP_263953.1 71065226 3514020 782538..783587 1 NC_007204.1 most likely carbohydrate biosynthesis; N-acetylneuraminate synthase 783587 3514020 Psyc_0660 Psychrobacter arcticus 273-4 N-acetylneuraminate synthase YP_263953.1 782538 D 259536 CDS YP_263954.1 71065227 3514021 783580..784248 1 NC_007204.1 LmbE-like protein 784248 3514021 Psyc_0661 Psychrobacter arcticus 273-4 LmbE-like protein YP_263954.1 783580 D 259536 CDS YP_263955.1 71065228 3514022 784248..784832 1 NC_007204.1 N-acetylneuraminate synthase 784832 3514022 Psyc_0662 Psychrobacter arcticus 273-4 N-acetylneuraminate synthase YP_263955.1 784248 D 259536 CDS YP_263956.1 71065229 3514023 784968..785879 1 NC_007204.1 alpha-2,3-sialyltransferase 785879 3514023 Psyc_0663 Psychrobacter arcticus 273-4 alpha-2,3-sialyltransferase YP_263956.1 784968 D 259536 CDS YP_263957.1 71065230 3514024 786060..787145 1 NC_007204.1 group 1 glycosyl transferase 787145 3514024 Psyc_0664 Psychrobacter arcticus 273-4 group 1 glycosyl transferase YP_263957.1 786060 D 259536 CDS YP_263958.1 71065231 3514025 787145..789016 1 NC_007204.1 There are two asparagine synthase genes present in the Psychrobacter 273-4 genome.; asparagine synthase 789016 asnB 3514025 asnB Psychrobacter arcticus 273-4 asparagine synthase YP_263958.1 787145 D 259536 CDS YP_263959.1 71065232 3514026 789071..790270 1 NC_007204.1 hypothetical protein 790270 3514026 Psyc_0666 Psychrobacter arcticus 273-4 hypothetical protein YP_263959.1 789071 D 259536 CDS YP_263960.1 71065233 3514027 790409..791491 1 NC_007204.1 group 1 glycosyl transferase 791491 3514027 Psyc_0667 Psychrobacter arcticus 273-4 group 1 glycosyl transferase YP_263960.1 790409 D 259536 CDS YP_263961.1 71065234 3514028 791494..793449 1 NC_007204.1 There are two asparagine synthases in the Psychrobacter 273-4 genome.; asparagine synthase 793449 wbpS 3514028 wbpS Psychrobacter arcticus 273-4 asparagine synthase YP_263961.1 791494 D 259536 CDS YP_263962.1 71065235 3514029 793474..794670 1 NC_007204.1 hypothetical protein 794670 3514029 Psyc_0669 Psychrobacter arcticus 273-4 hypothetical protein YP_263962.1 793474 D 259536 CDS YP_263963.1 71065236 3514030 794672..795787 1 NC_007204.1 group 1 glycosyl transferase 795787 3514030 Psyc_0670 Psychrobacter arcticus 273-4 group 1 glycosyl transferase YP_263963.1 794672 D 259536 CDS YP_263964.1 71065237 3514031 796077..797324 1 NC_007204.1 sugar transferase 797324 rfbP1 3514031 rfbP1 Psychrobacter arcticus 273-4 sugar transferase YP_263964.1 796077 D 259536 CDS YP_263965.1 71065238 3514032 797379..798857 1 NC_007204.1 Citation: possible Binding-protein-dependent transport systems inner membrane component domain though these are usually located at c-term; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.941 at residue 32; hypothetical protein 798857 3514032 Psyc_0672 Psychrobacter arcticus 273-4 hypothetical protein YP_263965.1 797379 D 259536 CDS YP_263966.1 71065239 3514033 799533..800420 1 NC_007204.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 800420 folD 3514033 folD Psychrobacter arcticus 273-4 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_263966.1 799533 D 259536 CDS YP_263967.1 71065240 3514034 complement(800634..801848) 1 NC_007204.1 magnesium and cobalt transport protein CorA 801848 corA 3514034 corA Psychrobacter arcticus 273-4 magnesium and cobalt transport protein CorA YP_263967.1 800634 R 259536 CDS YP_263968.1 71065241 3514035 complement(801929..802318) 1 NC_007204.1 hypothetical protein 802318 3514035 Psyc_0675 Psychrobacter arcticus 273-4 hypothetical protein YP_263968.1 801929 R 259536 CDS YP_263969.1 71065242 3514036 802862..804166 1 NC_007204.1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 804166 3514036 Psyc_0676 Psychrobacter arcticus 273-4 ATP phosphoribosyltransferase YP_263969.1 802862 D 259536 CDS YP_263970.1 71065243 3516137 804274..805563 1 NC_007204.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 805563 purA 3516137 purA Psychrobacter arcticus 273-4 adenylosuccinate synthetase YP_263970.1 804274 D 259536 CDS YP_263971.1 71065244 3516138 805877..806308 1 NC_007204.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 806308 ndk 3516138 ndk Psychrobacter arcticus 273-4 nucleoside diphosphate kinase YP_263971.1 805877 D 259536 CDS YP_263972.1 71065245 3516139 806786..808015 1 NC_007204.1 Other members of this family also contain the Radical SAM domain in central portion of protein generate a radical species by reductive cleavage of S:-adenosylmethionine (SAM) through an unusual Fe-S center; hypothetical protein 808015 3516139 Psyc_0679 Psychrobacter arcticus 273-4 hypothetical protein YP_263972.1 806786 D 259536 CDS YP_263973.1 71065246 3516140 808500..809447 1 NC_007204.1 TPR repeat implicated to be involved in protein-protein interaction; type 4 fimbrial biogenesis protein 809447 pilF 3516140 pilF Psychrobacter arcticus 273-4 type 4 fimbrial biogenesis protein YP_263973.1 808500 D 259536 CDS YP_263974.1 71065247 3516141 809438..810259 1 NC_007204.1 hypothetical protein 810259 3516141 Psyc_0681 Psychrobacter arcticus 273-4 hypothetical protein YP_263974.1 809438 D 259536 CDS YP_263975.1 71065248 3516142 810359..811474 1 NC_007204.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 811474 ispG 3516142 ispG Psychrobacter arcticus 273-4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_263975.1 810359 D 259536 CDS YP_263976.1 71065249 3516143 811539..812867 1 NC_007204.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 812867 hisS 3516143 hisS Psychrobacter arcticus 273-4 histidyl-tRNA synthetase YP_263976.1 811539 D 259536 CDS YP_263977.1 71065250 3516144 812919..813713 1 NC_007204.1 hypothetical protein 813713 3516144 Psyc_0684 Psychrobacter arcticus 273-4 hypothetical protein YP_263977.1 812919 D 259536 CDS YP_263978.1 71065251 3516145 813968..815131 1 NC_007204.1 possible bacterial quinoprotein; hypothetical protein 815131 3516145 Psyc_0685 Psychrobacter arcticus 273-4 hypothetical protein YP_263978.1 813968 D 259536 CDS YP_263979.1 71065252 3516146 815568..816989 1 NC_007204.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 816989 engA 3516146 engA Psychrobacter arcticus 273-4 GTP-binding protein EngA YP_263979.1 815568 D 259536 CDS YP_263980.1 71065253 3516147 complement(817287..818453) 1 NC_007204.1 penicillin-binding protein 6 818453 dacC 3516147 dacC Psychrobacter arcticus 273-4 penicillin-binding protein 6 YP_263980.1 817287 R 259536 CDS YP_263981.1 71065254 3516148 complement(818950..819387) 1 NC_007204.1 Signal peptide predicted.; hypothetical protein 819387 3516148 Psyc_0688 Psychrobacter arcticus 273-4 hypothetical protein YP_263981.1 818950 R 259536 CDS YP_263982.1 71065255 3516149 819884..820171 1 NC_007204.1 hypothetical protein 820171 3516149 Psyc_0689 Psychrobacter arcticus 273-4 hypothetical protein YP_263982.1 819884 D 259536 CDS YP_263983.1 71065256 3516150 820256..821074 1 NC_007204.1 Probable membrane bound metallopeptidase; Citation: Members of this family are zinc metallopeptidases with a range of specificities.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.994) with cleavage site probability 0.511 at residue 23; hypothetical protein 821074 3516150 Psyc_0690 Psychrobacter arcticus 273-4 hypothetical protein YP_263983.1 820256 D 259536 CDS YP_263984.1 71065257 3516151 821152..822456 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.591 at residue 25; membrane-bound lytic murein transglycosylase 822456 3516151 Psyc_0691 Psychrobacter arcticus 273-4 membrane-bound lytic murein transglycosylase YP_263984.1 821152 D 259536 CDS YP_263985.1 71065258 3516152 complement(822617..823477) 1 NC_007204.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 823477 3516152 Psyc_0692 Psychrobacter arcticus 273-4 UDP-2,3-diacylglucosamine hydrolase YP_263985.1 822617 R 259536 CDS YP_263986.1 71065259 3516153 complement(823547..824062) 1 NC_007204.1 cyclophilin type peptidyl-prolyl cis-trans isomerase 824062 ppiB 3516153 ppiB Psychrobacter arcticus 273-4 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_263986.1 823547 R 259536 CDS YP_263987.1 71065260 3516154 824421..826160 1 NC_007204.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 826160 glnS 3516154 glnS Psychrobacter arcticus 273-4 glutaminyl-tRNA synthetase YP_263987.1 824421 D 259536 CDS YP_263988.1 71065261 3516155 826438..827184 1 NC_007204.1 hypothetical protein 827184 3516155 Psyc_0695 Psychrobacter arcticus 273-4 hypothetical protein YP_263988.1 826438 D 259536 CDS YP_263989.1 71065262 3516156 827474..828112 1 NC_007204.1 1-Cys peroxiredoxin 828112 3516156 Psyc_0696 Psychrobacter arcticus 273-4 1-Cys peroxiredoxin YP_263989.1 827474 D 259536 CDS YP_263990.1 71065263 3516157 828401..829063 1 NC_007204.1 glutathione S-transferase 829063 3516157 Psyc_0697 Psychrobacter arcticus 273-4 glutathione S-transferase YP_263990.1 828401 D 259536 CDS YP_263991.1 71065264 3516158 829537..830436 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.791 at residue 23; hypothetical protein 830436 3516158 Psyc_0698 Psychrobacter arcticus 273-4 hypothetical protein YP_263991.1 829537 D 259536 CDS YP_263992.1 71065265 3516159 complement(830680..831264) 1 NC_007204.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 831264 ruvC 3516159 ruvC Psychrobacter arcticus 273-4 Holliday junction resolvase YP_263992.1 830680 R 259536 CDS YP_263993.1 71065266 3516160 831417..832034 1 NC_007204.1 inner membrane protein FxsA 832034 yjeG 3516160 yjeG Psychrobacter arcticus 273-4 inner membrane protein FxsA YP_263993.1 831417 D 259536 CDS YP_263994.1 71065267 3516161 832603..834261 1 NC_007204.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 834261 pgm 3516161 pgm Psychrobacter arcticus 273-4 phosphoglyceromutase YP_263994.1 832603 D 259536 CDS YP_263995.1 71065268 3516162 834959..836263 1 NC_007204.1 hypothetical protein 836263 3516162 Psyc_0702 Psychrobacter arcticus 273-4 hypothetical protein YP_263995.1 834959 D 259536 CDS YP_263996.1 71065269 3516163 complement(836624..837259) 1 NC_007204.1 Domain arrangement suggests belongs to two-component sensory transduction system activated by phosphorylation by a transmembrane kinase. The proteins that belong to this class include bvgA, comA, dctR; degU, evgA, fimZ, fixJ, gacA, glpR, narL, narP, nodW; LuxR family transcriptional regulator 837259 3516163 Psyc_0703 Psychrobacter arcticus 273-4 LuxR family transcriptional regulator YP_263996.1 836624 R 259536 CDS YP_263997.1 71065270 3516164 837666..838757 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.982 at residue 27; murein-DD-endopeptidase 838757 3516164 Psyc_0704 Psychrobacter arcticus 273-4 murein-DD-endopeptidase YP_263997.1 837666 D 259536 CDS YP_263998.1 71065271 3516165 838875..839585 1 NC_007204.1 thiamine monophosphate synthase 839585 thiE 3516165 thiE Psychrobacter arcticus 273-4 thiamine monophosphate synthase YP_263998.1 838875 D 259536 CDS YP_263999.1 71065272 3516166 839849..841051 1 NC_007204.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 841051 pgk 3516166 pgk Psychrobacter arcticus 273-4 phosphoglycerate kinase YP_263999.1 839849 D 259536 CDS YP_264000.1 71065273 3516167 841312..841611 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.867 at residue 23; hypothetical protein 841611 3516167 Psyc_0707 Psychrobacter arcticus 273-4 hypothetical protein YP_264000.1 841312 D 259536 CDS YP_264001.1 71065274 3516168 842052..843089 1 NC_007204.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 843089 fba 3516168 fba Psychrobacter arcticus 273-4 fructose-1,6-bisphosphate aldolase YP_264001.1 842052 D 259536 CDS YP_264002.1 71065275 3516169 843168..843791 1 NC_007204.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 843791 ruvA 3516169 ruvA Psychrobacter arcticus 273-4 Holliday junction DNA helicase RuvA YP_264002.1 843168 D 259536 CDS YP_264003.1 71065276 3516170 843964..844959 1 NC_007204.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 844959 ruvB 3516170 ruvB Psychrobacter arcticus 273-4 Holliday junction DNA helicase RuvB YP_264003.1 843964 D 259536 CDS YP_264004.1 71065277 3516171 complement(845085..846746) 1 NC_007204.1 2-octaprenylphenol hydroxylase 846746 3516171 Psyc_0711 Psychrobacter arcticus 273-4 2-octaprenylphenol hydroxylase YP_264004.1 845085 R 259536 CDS YP_264005.1 71065278 3516172 complement(846804..847499) 1 NC_007204.1 hypothetical protein 847499 3516172 Psyc_0712 Psychrobacter arcticus 273-4 hypothetical protein YP_264005.1 846804 R 259536 CDS YP_264006.1 71065279 3516173 complement(847749..848873) 1 NC_007204.1 Extra 120 amino acids at N-terminus compared to homologs.; 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase 848873 ubiE 3516173 ubiE Psychrobacter arcticus 273-4 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase YP_264006.1 847749 R 259536 CDS YP_264007.1 71065280 3516174 complement(848955..849665) 1 NC_007204.1 hypothetical protein 849665 3516174 Psyc_0714 Psychrobacter arcticus 273-4 hypothetical protein YP_264007.1 848955 R 259536 CDS YP_264008.1 71065281 3516175 849949..851604 1 NC_007204.1 Protein of unknown function DUF344; polyphosphate:AMP phosphotransferase 851604 3516175 Psyc_0715 Psychrobacter arcticus 273-4 polyphosphate:AMP phosphotransferase YP_264008.1 849949 D 259536 CDS YP_264009.1 71065282 3514560 851996..853603 1 NC_007204.1 inorganic phosphate transporter 853603 3514560 Psyc_0716 Psychrobacter arcticus 273-4 inorganic phosphate transporter YP_264009.1 851996 D 259536 CDS YP_264010.1 71065283 3514561 complement(853728..855368) 1 NC_007204.1 in Corynebacterium glutamicum the aminotransferase can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; this protein contains a helix-turn-helix domain at the N-terminus; bifunctional HTH-domain containing protein/aminotransferase 855368 3514561 Psyc_0717 Psychrobacter arcticus 273-4 bifunctional HTH-domain containing protein/aminotransferase YP_264010.1 853728 R 259536 CDS YP_264011.1 71065284 3514562 855959..856384 1 NC_007204.1 Have a SelR domain; hypothetical protein 856384 3514562 Psyc_0718 Psychrobacter arcticus 273-4 hypothetical protein YP_264011.1 855959 D 259536 CDS YP_264012.1 71065285 3514565 857655..860012 1 NC_007204.1 Signal transduction histidine kinase sensor 860012 3514565 Psyc_0719 Psychrobacter arcticus 273-4 Signal transduction histidine kinase sensor YP_264012.1 857655 D 259536 CDS YP_264013.1 71065286 3514566 860046..860984 1 NC_007204.1 adjacent gene is histidine kinase; Fis family transcriptional regulator 860984 3514566 Psyc_0720 Psychrobacter arcticus 273-4 Fis family transcriptional regulator YP_264013.1 860046 D 259536 CDS YP_264014.1 71065287 3514567 861448..861783 1 NC_007204.1 hypothetical protein 861783 3514567 Psyc_0721 Psychrobacter arcticus 273-4 hypothetical protein YP_264014.1 861448 D 259536 CDS YP_264015.1 71065288 3514573 complement(865068..867113) 1 NC_007204.1 BCCT family choline/carnitine/betaine transporter 867113 3514573 Psyc_0727 Psychrobacter arcticus 273-4 BCCT family choline/carnitine/betaine transporter YP_264015.1 865068 R 259536 CDS YP_264016.1 71065289 3514574 complement(867331..869031) 1 NC_007204.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 869031 betA 3514574 betA Psychrobacter arcticus 273-4 choline dehydrogenase YP_264016.1 867331 R 259536 CDS YP_264017.1 71065290 3514575 complement(869114..870616) 1 NC_007204.1 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 870616 betB 3514575 betB Psychrobacter arcticus 273-4 betaine aldehyde dehydrogenase YP_264017.1 869114 R 259536 CDS YP_264018.1 71065291 3514576 complement(870804..871367) 1 NC_007204.1 TetR family transcriptional regulator 871367 3514576 Psyc_0730 Psychrobacter arcticus 273-4 TetR family transcriptional regulator YP_264018.1 870804 R 259536 CDS YP_264019.1 71065292 3514577 complement(871371..871715) 1 NC_007204.1 small multidrug efflux pump 871715 3514577 Psyc_0731 Psychrobacter arcticus 273-4 small multidrug efflux pump YP_264019.1 871371 R 259536 CDS YP_264020.1 71065293 3514578 complement(873083..873598) 1 NC_007204.1 hypothetical protein 873598 3514578 Psyc_0732 Psychrobacter arcticus 273-4 hypothetical protein YP_264020.1 873083 R 259536 CDS YP_264021.1 71065294 3514579 873984..875810 1 NC_007204.1 exonuclease RecJ 875810 recJ 3514579 recJ Psychrobacter arcticus 273-4 exonuclease RecJ YP_264021.1 873984 D 259536 CDS YP_264022.1 71065295 3514580 complement(875841..876503) 1 NC_007204.1 strong RBS found; predicted membrane protein; hypothetical protein 876503 3514580 Psyc_0734 Psychrobacter arcticus 273-4 hypothetical protein YP_264022.1 875841 R 259536 CDS YP_264023.1 71065296 3514581 complement(876785..877876) 1 NC_007204.1 Signal peptide and 9 transmembrane helices predicted.; hypothetical protein 877876 3514581 Psyc_0735 Psychrobacter arcticus 273-4 hypothetical protein YP_264023.1 876785 R 259536 CDS YP_264024.1 71065297 3514582 complement(878072..878806) 1 NC_007204.1 radical activating enzyme 878806 3514582 Psyc_0736 Psychrobacter arcticus 273-4 radical activating enzyme YP_264024.1 878072 R 259536 CDS YP_264025.1 71065298 3514583 complement(879028..879849) 1 NC_007204.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 879849 dapD 3514583 dapD Psychrobacter arcticus 273-4 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_264025.1 879028 R 259536 CDS YP_264026.1 71065299 3514584 complement(879961..880893) 1 NC_007204.1 Esterase/lipase/thioesterase, active site; lysophospholipase 880893 3514584 Psyc_0738 Psychrobacter arcticus 273-4 lysophospholipase YP_264026.1 879961 R 259536 CDS YP_264027.1 71065300 3514586 881704..883416 1 NC_007204.1 hypothetical protein 883416 3514586 Psyc_0739 Psychrobacter arcticus 273-4 hypothetical protein YP_264027.1 881704 D 259536 CDS YP_264028.1 71065301 3514587 883454..884491 1 NC_007204.1 hypothetical protein 884491 3514587 Psyc_0740 Psychrobacter arcticus 273-4 hypothetical protein YP_264028.1 883454 D 259536 CDS YP_264029.1 71065302 3514588 884571..885935 1 NC_007204.1 cyclopropane-fatty-acyl-phospholipid synthase 885935 cfa 3514588 cfa Psychrobacter arcticus 273-4 cyclopropane-fatty-acyl-phospholipid synthase YP_264029.1 884571 D 259536 CDS YP_264030.1 71065303 3514242 885973..886383 1 NC_007204.1 Possible membrane protein; hypothetical protein 886383 3514242 Psyc_0742 Psychrobacter arcticus 273-4 hypothetical protein YP_264030.1 885973 D 259536 CDS YP_264031.1 71065304 3514243 886489..887052 1 NC_007204.1 acyl-CoA thioester hydrolase 887052 3514243 Psyc_0743 Psychrobacter arcticus 273-4 acyl-CoA thioester hydrolase YP_264031.1 886489 D 259536 CDS YP_264032.1 71065305 3514244 887460..889571 1 NC_007204.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 889571 uvrB 3514244 uvrB Psychrobacter arcticus 273-4 excinuclease ABC subunit B YP_264032.1 887460 D 259536 CDS YP_264033.1 71065306 3514245 complement(889885..890271) 1 NC_007204.1 Possible lipoprotein, signal peptide predicted.; hypothetical protein 890271 3514245 Psyc_0745 Psychrobacter arcticus 273-4 hypothetical protein YP_264033.1 889885 R 259536 CDS YP_264034.1 71065307 3514246 891023..892057 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.499 at residue 28; TRAP-T family transporter periplasmic substrate binding subunit 892057 3514246 Psyc_0746 Psychrobacter arcticus 273-4 TRAP-T family transporter periplasmic substrate binding subunit YP_264034.1 891023 D 259536 CDS YP_264035.1 71065308 3514247 892128..892595 1 NC_007204.1 hypothetical protein 892595 3514247 Psyc_0747 Psychrobacter arcticus 273-4 hypothetical protein YP_264035.1 892128 D 259536 CDS YP_264036.1 71065309 3514248 892567..894651 1 NC_007204.1 TRAP-T family transporter fused inner membrane subunits 894651 3514248 Psyc_0748 Psychrobacter arcticus 273-4 TRAP-T family transporter fused inner membrane subunits YP_264036.1 892567 D 259536 CDS YP_264037.1 71065310 3514249 complement(894786..895829) 1 NC_007204.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 895829 lipA 3514249 lipA Psychrobacter arcticus 273-4 lipoyl synthase YP_264037.1 894786 R 259536 CDS YP_264038.1 71065311 3514250 complement(895992..896441) 1 NC_007204.1 involved in protocatechuate catabolism; carboxymuconolactone decarboxylase 896441 3514250 Psyc_0750 Psychrobacter arcticus 273-4 carboxymuconolactone decarboxylase YP_264038.1 895992 R 259536 CDS YP_264039.1 71065312 3514251 897067..899670 1 NC_007204.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 899670 acnB 3514251 acnB Psychrobacter arcticus 273-4 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_264039.1 897067 D 259536 CDS YP_264040.1 71065313 3514253 complement(900837..901634) 1 NC_007204.1 enoyl-CoA hydratase 901634 3514253 Psyc_0753 Psychrobacter arcticus 273-4 enoyl-CoA hydratase YP_264040.1 900837 R 259536 CDS YP_264041.1 71065314 3514254 901683..901910 1 NC_007204.1 hypothetical protein 901910 3514254 Psyc_0754 Psychrobacter arcticus 273-4 hypothetical protein YP_264041.1 901683 D 259536 CDS YP_264042.1 71065315 3514255 complement(901935..903077) 1 NC_007204.1 hypothetical protein 903077 3514255 Psyc_0755 Psychrobacter arcticus 273-4 hypothetical protein YP_264042.1 901935 R 259536 CDS YP_264043.1 71065316 3514256 complement(903074..904267) 1 NC_007204.1 hypothetical protein 904267 3514256 Psyc_0756 Psychrobacter arcticus 273-4 hypothetical protein YP_264043.1 903074 R 259536 CDS YP_264044.1 71065317 3514257 complement(904330..905139) 1 NC_007204.1 possible hydrolase of the HAD superfamily; hypothetical protein 905139 3514257 Psyc_0757 Psychrobacter arcticus 273-4 hypothetical protein YP_264044.1 904330 R 259536 CDS YP_264045.1 71065318 3514258 complement(905500..906771) 1 NC_007204.1 RBS found; hypothetical protein 906771 3514258 Psyc_0758 Psychrobacter arcticus 273-4 hypothetical protein YP_264045.1 905500 R 259536 CDS YP_264046.1 71065319 3514259 complement(906907..908082) 1 NC_007204.1 hypothetical protein 908082 3514259 Psyc_0759 Psychrobacter arcticus 273-4 hypothetical protein YP_264046.1 906907 R 259536 CDS YP_264047.1 71065320 3514260 908547..909806 1 NC_007204.1 Response to stress; tellurium resistance protein 909806 terA 3514260 terA Psychrobacter arcticus 273-4 tellurium resistance protein YP_264047.1 908547 D 259536 CDS YP_264048.1 71065321 3514261 complement(910065..910673) 1 NC_007204.1 Bacterial stress protein; tellurium resitance protein TerZ 910673 3514261 Psyc_0761 Psychrobacter arcticus 273-4 tellurium resitance protein TerZ YP_264048.1 910065 R 259536 CDS YP_264049.1 71065322 3514262 complement(910708..911460) 1 NC_007204.1 strong RBS found; hypothetical protein 911460 3514262 Psyc_0762 Psychrobacter arcticus 273-4 hypothetical protein YP_264049.1 910708 R 259536 CDS YP_264050.1 71065323 3514263 complement(911675..912250) 1 NC_007204.1 Bacterial stress protein; tellurium resistance TerD 912250 3514263 Psyc_0763 Psychrobacter arcticus 273-4 tellurium resistance TerD YP_264050.1 911675 R 259536 CDS YP_264051.1 71065324 3514264 complement(912863..913930) 1 NC_007204.1 hypothetical protein 913930 3514264 Psyc_0764 Psychrobacter arcticus 273-4 hypothetical protein YP_264051.1 912863 R 259536 CDS YP_264052.1 71065325 3514265 complement(914192..914767) 1 NC_007204.1 Stress protein; tellurium resistance protein 914767 3514265 Psyc_0765 Psychrobacter arcticus 273-4 tellurium resistance protein YP_264052.1 914192 R 259536 CDS YP_264053.1 71065326 3514266 complement(915171..917477) 1 NC_007204.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 917477 rlmL 3514266 rlmL Psychrobacter arcticus 273-4 23S rRNA m(2)G2445 methyltransferase YP_264053.1 915171 R 259536 CDS YP_264054.1 71065327 3514267 complement(917799..919004) 1 NC_007204.1 small-conductance mechanosensitive ion channel 919004 3514267 Psyc_0767 Psychrobacter arcticus 273-4 small-conductance mechanosensitive ion channel YP_264054.1 917799 R 259536 CDS YP_264055.1 71065328 3514268 complement(919073..920608) 1 NC_007204.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 920608 3514268 Psyc_0768 Psychrobacter arcticus 273-4 dihydrolipoamide dehydrogenase YP_264055.1 919073 R 259536 CDS YP_264056.1 71065329 3514269 complement(920662..921162) 1 NC_007204.1 peroxiredoxin 921162 3514269 Psyc_0769 Psychrobacter arcticus 273-4 peroxiredoxin YP_264056.1 920662 R 259536 CDS YP_264057.1 71065330 3514270 complement(921321..921650) 1 NC_007204.1 Signal peptide predicted; hypothetical protein 921650 3514270 Psyc_0770 Psychrobacter arcticus 273-4 hypothetical protein YP_264057.1 921321 R 259536 CDS YP_264058.1 71065331 3514271 complement(921923..922780) 1 NC_007204.1 exoenzyme S synthesis protein B 922780 exsB 3514271 exsB Psychrobacter arcticus 273-4 exoenzyme S synthesis protein B YP_264058.1 921923 R 259536 CDS YP_264059.1 71065332 3514272 923085..924230 1 NC_007204.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 924230 3514272 Psyc_0772 Psychrobacter arcticus 273-4 C32 tRNA thiolase YP_264059.1 923085 D 259536 CDS YP_264060.1 71065333 3514273 complement(924331..924912) 1 NC_007204.1 hypothetical protein 924912 3514273 Psyc_0773 Psychrobacter arcticus 273-4 hypothetical protein YP_264060.1 924331 R 259536 CDS YP_264061.1 71065334 3514274 complement(925059..926468) 1 NC_007204.1 4Fe-4S ferredoxin domain found; hypothetical protein 926468 3514274 Psyc_0774 Psychrobacter arcticus 273-4 hypothetical protein YP_264061.1 925059 R 259536 CDS YP_264062.1 71065335 3514275 complement(927020..928144) 1 NC_007204.1 cytochrome c oxidase cbb3-type subunit III 928144 3514275 Psyc_0775 Psychrobacter arcticus 273-4 cytochrome c oxidase cbb3-type subunit III YP_264062.1 927020 R 259536 CDS YP_264063.1 71065336 3514276 complement(928144..928323) 1 NC_007204.1 cytochrome C, oxidase component 928323 3514276 Psyc_0776 Psychrobacter arcticus 273-4 cytochrome C, oxidase component YP_264063.1 928144 R 259536 CDS YP_264064.1 71065337 3514277 complement(928323..928961) 1 NC_007204.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 928961 3514277 Psyc_0777 Psychrobacter arcticus 273-4 cbb3-type cytochrome c oxidase subunit II YP_264064.1 928323 R 259536 CDS YP_264065.1 71065338 3514278 complement(928971..930452) 1 NC_007204.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 930452 3514278 Psyc_0778 Psychrobacter arcticus 273-4 cbb3-type cytochrome c oxidase subunit I YP_264065.1 928971 R 259536 CDS YP_264066.1 71065339 3514279 931329..931718 1 NC_007204.1 hypothetical protein 931718 3514279 Psyc_0779 Psychrobacter arcticus 273-4 hypothetical protein YP_264066.1 931329 D 259536 CDS YP_264067.1 71065340 3514628 complement(931838..932806) 1 NC_007204.1 hypothetical protein 932806 3514628 Psyc_0780 Psychrobacter arcticus 273-4 hypothetical protein YP_264067.1 931838 R 259536 CDS YP_264068.1 71065341 3514629 933257..934492 1 NC_007204.1 lipoprotein ABC transporter inner membrane protein LolE 934492 lolE 3514629 lolE Psychrobacter arcticus 273-4 lipoprotein ABC transporter inner membrane protein LolE YP_264068.1 933257 D 259536 CDS YP_264069.1 71065342 3514630 934537..935217 1 NC_007204.1 lipoprotein ABC transporter ATPase LolD 935217 lolD 3514630 lolD Psychrobacter arcticus 273-4 lipoprotein ABC transporter ATPase LolD YP_264069.1 934537 D 259536 CDS YP_264070.1 71065343 3514631 935277..935585 1 NC_007204.1 hypothetical protein 935585 3514631 Psyc_0783 Psychrobacter arcticus 273-4 hypothetical protein YP_264070.1 935277 D 259536 CDS YP_264071.1 71065344 3514632 complement(935595..936188) 1 NC_007204.1 4 transmembrane helices; hypothetical protein 936188 3514632 Psyc_0784 Psychrobacter arcticus 273-4 hypothetical protein YP_264071.1 935595 R 259536 CDS YP_264072.1 71065345 3514633 936587..939547 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.990) with cleavage site probability 0.913 at residue 21; competence protein, ComEC 939547 3514633 Psyc_0785 Psychrobacter arcticus 273-4 competence protein, ComEC YP_264072.1 936587 D 259536 CDS YP_264073.1 71065346 3514634 939936..940991 1 NC_007204.1 signal peptide peptidase 940991 sppA 3514634 sppA Psychrobacter arcticus 273-4 signal peptide peptidase YP_264073.1 939936 D 259536 CDS YP_264074.1 71065347 3514635 941117..942007 1 NC_007204.1 hydrolase 942007 3514635 Psyc_0787 Psychrobacter arcticus 273-4 hydrolase YP_264074.1 941117 D 259536 CDS YP_264075.1 71065348 3514636 942107..942904 1 NC_007204.1 7 transmembrane helices; hypothetical protein 942904 3514636 Psyc_0788 Psychrobacter arcticus 273-4 hypothetical protein YP_264075.1 942107 D 259536 CDS YP_264076.1 71065349 3514637 complement(942973..943944) 1 NC_007204.1 tRNA-dihydrouridine synthase A 943944 3514637 Psyc_0789 Psychrobacter arcticus 273-4 tRNA-dihydrouridine synthase A YP_264076.1 942973 R 259536 CDS YP_264077.1 71065350 3514638 complement(944232..945533) 1 NC_007204.1 major facilitator transporter 945533 3514638 Psyc_0790 Psychrobacter arcticus 273-4 major facilitator transporter YP_264077.1 944232 R 259536 CDS YP_264078.1 71065351 3514639 complement(945739..947451) 1 NC_007204.1 phospholipase D 947451 3514639 Psyc_0791 Psychrobacter arcticus 273-4 phospholipase D YP_264078.1 945739 R 259536 CDS YP_264079.1 71065352 3514640 947894..949168 1 NC_007204.1 cystathionine gamma-synthase 949168 metZ 3514640 metZ Psychrobacter arcticus 273-4 cystathionine gamma-synthase YP_264079.1 947894 D 259536 CDS YP_264080.1 71065353 3514641 949252..949581 1 NC_007204.1 hypothetical protein 949581 3514641 Psyc_0793 Psychrobacter arcticus 273-4 hypothetical protein YP_264080.1 949252 D 259536 CDS YP_264081.1 71065354 3514642 949693..950286 1 NC_007204.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 950286 recR 3514642 recR Psychrobacter arcticus 273-4 recombination protein RecR YP_264081.1 949693 D 259536 CDS YP_264082.1 71065355 3514643 950427..951725 1 NC_007204.1 ribonuclease D 951725 rnd 3514643 rnd Psychrobacter arcticus 273-4 ribonuclease D YP_264082.1 950427 D 259536 CDS YP_264083.1 71065356 3514644 complement(952044..954941) 1 NC_007204.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 954941 gcvP 3514644 gcvP Psychrobacter arcticus 273-4 glycine dehydrogenase YP_264083.1 952044 R 259536 CDS YP_264084.1 71065357 3514645 complement(955005..955817) 1 NC_007204.1 nitroreductase family protein 955817 3514645 Psyc_0797 Psychrobacter arcticus 273-4 nitroreductase family protein YP_264084.1 955005 R 259536 CDS YP_264085.1 71065358 3514646 complement(956080..956460) 1 NC_007204.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 956460 gcvH 3514646 gcvH Psychrobacter arcticus 273-4 glycine cleavage system protein H YP_264085.1 956080 R 259536 CDS YP_264086.1 71065359 3514647 complement(956527..957699) 1 NC_007204.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 957699 gcvT 3514647 gcvT Psychrobacter arcticus 273-4 glycine cleavage system aminomethyltransferase T YP_264086.1 956527 R 259536 CDS YP_264087.1 71065360 3514648 958574..958897 1 NC_007204.1 hypothetical protein 958897 3514648 Psyc_0800 Psychrobacter arcticus 273-4 hypothetical protein YP_264087.1 958574 D 259536 CDS YP_264088.1 71065361 3514649 959112..959699 1 NC_007204.1 3 transmembrane helices; hypothetical protein 959699 3514649 Psyc_0801 Psychrobacter arcticus 273-4 hypothetical protein YP_264088.1 959112 D 259536 CDS YP_264089.1 71065362 3514650 960079..960933 1 NC_007204.1 ATPase AAA 960933 3514650 Psyc_0802 Psychrobacter arcticus 273-4 ATPase AAA YP_264089.1 960079 D 259536 CDS YP_264090.1 71065363 3514651 961011..962234 1 NC_007204.1 hypothetical protein 962234 3514651 Psyc_0803 Psychrobacter arcticus 273-4 hypothetical protein YP_264090.1 961011 D 259536 CDS YP_264091.1 71065364 3514652 complement(962616..963443) 1 NC_007204.1 This family of bacterial transcriptional regulators includes the acetate operon repressor both of which are members of the iclR family [1, 2]. These proteins have a Helix-Turn-Helix motif at the N-terminus. The C-terminal region may bind to the regulatory; IclR family transcriptional regulator 963443 3514652 Psyc_0804 Psychrobacter arcticus 273-4 IclR family transcriptional regulator YP_264091.1 962616 R 259536 CDS YP_264092.1 71065365 3514653 963619..964803 1 NC_007204.1 glutaryl-CoA dehydrogenase 964803 gcdH 3514653 gcdH Psychrobacter arcticus 273-4 glutaryl-CoA dehydrogenase YP_264092.1 963619 D 259536 CDS YP_264093.1 71065366 3514654 965018..966289 1 NC_007204.1 L-carnitine dehydratase 966289 3514654 Psyc_0806 Psychrobacter arcticus 273-4 L-carnitine dehydratase YP_264093.1 965018 D 259536 CDS YP_264094.1 71065367 3514655 complement(966522..967280) 1 NC_007204.1 IclR family transcriptional regulator 967280 3514655 Psyc_0807 Psychrobacter arcticus 273-4 IclR family transcriptional regulator YP_264094.1 966522 R 259536 CDS YP_264095.1 71065368 3514656 967710..969176 1 NC_007204.1 succinate semialdehyde dehydrogenase 969176 3514656 Psyc_0808 Psychrobacter arcticus 273-4 succinate semialdehyde dehydrogenase YP_264095.1 967710 D 259536 CDS YP_264096.1 71065369 3514657 969323..970582 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.940) with cleavage site probability 0.907 at residue 28; 4-aminobutyrate aminotransferase 970582 gabT 3514657 gabT Psychrobacter arcticus 273-4 4-aminobutyrate aminotransferase YP_264096.1 969323 D 259536 CDS YP_264097.1 71065370 3514658 970850..972292 1 NC_007204.1 amino acid transporter 972292 3514658 Psyc_0810 Psychrobacter arcticus 273-4 amino acid transporter YP_264097.1 970850 D 259536 CDS YP_264098.1 71065371 3514659 complement(972553..973782) 1 NC_007204.1 glycosyl transferase family protein 973782 3514659 Psyc_0811 Psychrobacter arcticus 273-4 glycosyl transferase family protein YP_264098.1 972553 R 259536 CDS YP_264099.1 71065372 3514660 complement(974138..975106) 1 NC_007204.1 RBS found. similarity to hepatitis A virus cellular receptor; hypothetical protein 975106 3514660 Psyc_0812 Psychrobacter arcticus 273-4 hypothetical protein YP_264099.1 974138 R 259536 CDS YP_264100.1 71065373 3514661 complement(975447..975923) 1 NC_007204.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 975923 greA 3514661 greA Psychrobacter arcticus 273-4 transcription elongation factor GreA YP_264100.1 975447 R 259536 CDS YP_264101.1 71065374 3514662 complement(976262..979516) 1 NC_007204.1 There is only one set of carbomoyl-phosphate synthase genes in Psychrobacter 273-4; carbamoyl-phosphate synthase large subunit 979516 carB 3514662 carB Psychrobacter arcticus 273-4 carbamoyl-phosphate synthase large subunit YP_264101.1 976262 R 259536 CDS YP_264102.1 71065375 3514663 complement(979715..980947) 1 NC_007204.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 980947 carA 3514663 carA Psychrobacter arcticus 273-4 carbamoyl phosphate synthase small subunit YP_264102.1 979715 R 259536 CDS YP_264103.1 71065376 3514664 complement(981334..981903) 1 NC_007204.1 PAP2 family; membrane-associated phospholipid phosphatase 981903 3514664 Psyc_0816 Psychrobacter arcticus 273-4 membrane-associated phospholipid phosphatase YP_264103.1 981334 R 259536 CDS YP_264104.1 71065377 3514665 982318..982854 1 NC_007204.1 transferase 982854 3514665 Psyc_0817 Psychrobacter arcticus 273-4 transferase YP_264104.1 982318 D 259536 CDS YP_264105.1 71065378 3514666 982916..983632 1 NC_007204.1 hypothetical protein 983632 3514666 Psyc_0818 Psychrobacter arcticus 273-4 hypothetical protein YP_264105.1 982916 D 259536 CDS YP_264106.1 71065379 3514319 983773..984822 1 NC_007204.1 peptide chain release factor 2 984822 prfB 3514319 prfB Psychrobacter arcticus 273-4 peptide chain release factor 2 YP_264106.1 983773 D 259536 CDS YP_264107.1 71065380 3514320 984892..985176 1 NC_007204.1 hypothetical protein 985176 3514320 Psyc_0820 Psychrobacter arcticus 273-4 hypothetical protein YP_264107.1 984892 D 259536 CDS YP_264108.1 71065381 3514321 985662..987371 1 NC_007204.1 Probable AMP-dependent synthetase and ligase; acetyl-CoA synthetase 987371 3514321 Psyc_0821 Psychrobacter arcticus 273-4 acetyl-CoA synthetase YP_264108.1 985662 D 259536 CDS YP_264109.1 71065382 3514322 987439..988218 1 NC_007204.1 3-hydroxyacyl-CoA dehydrogenase 988218 3514322 Psyc_0822 Psychrobacter arcticus 273-4 3-hydroxyacyl-CoA dehydrogenase YP_264109.1 987439 D 259536 CDS YP_264110.1 71065383 3514323 988604..991201 1 NC_007204.1 chaperonin clpA/B 991201 clpB 3514323 clpB Psychrobacter arcticus 273-4 chaperonin clpA/B YP_264110.1 988604 D 259536 CDS YP_264111.1 71065384 3514324 991514..991642 1 NC_007204.1 hypothetical protein 991642 3514324 Psyc_0824 Psychrobacter arcticus 273-4 hypothetical protein YP_264111.1 991514 D 259536 CDS YP_264112.1 71065385 3514325 991614..991931 1 NC_007204.1 hypothetical protein 991931 3514325 Psyc_0825 Psychrobacter arcticus 273-4 hypothetical protein YP_264112.1 991614 D 259536 CDS YP_264113.1 71065386 3514326 992104..993756 1 NC_007204.1 BCCT family choline/carnitine/betaine transporter 993756 3514326 Psyc_0826 Psychrobacter arcticus 273-4 BCCT family choline/carnitine/betaine transporter YP_264113.1 992104 D 259536 CDS YP_264114.1 71065387 3514327 complement(993913..994269) 1 NC_007204.1 RBS found; hypothetical protein 994269 3514327 Psyc_0827 Psychrobacter arcticus 273-4 hypothetical protein YP_264114.1 993913 R 259536 CDS YP_264115.1 71065388 3514328 complement(994366..995532) 1 NC_007204.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 995532 metK 3514328 metK Psychrobacter arcticus 273-4 S-adenosylmethionine synthetase YP_264115.1 994366 R 259536 CDS YP_264116.1 71065389 3514329 complement(996160..996855) 1 NC_007204.1 Citation: Tainer JA, Thayer MM, Cunningham RP. 1995. DNA repair proteins. Curr Opin Struct Biol. 5(1):20-6.; DNA-(apurinic or apyrimidinic site) lyase / endonuclease III 996855 nth 3514329 nth Psychrobacter arcticus 273-4 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III YP_264116.1 996160 R 259536 CDS YP_264117.1 71065390 3514330 complement(996897..997739) 1 NC_007204.1 4Fe-4S ferredoxin; RnfABCDGE type electron transport complex subunit B 997739 3514330 Psyc_0830 Psychrobacter arcticus 273-4 RnfABCDGE type electron transport complex subunit B YP_264117.1 996897 R 259536 CDS YP_264118.1 71065391 3514331 complement(997970..999046) 1 NC_007204.1 MutT anti- mutagenic activity represents only one subgroup within this family.; NUDIX hydrolase 999046 3514331 Psyc_0831 Psychrobacter arcticus 273-4 NUDIX hydrolase YP_264118.1 997970 R 259536 CDS YP_264119.1 71065392 3514332 complement(999127..1000824) 1 NC_007204.1 hypothetical protein 1000824 3514332 Psyc_0832 Psychrobacter arcticus 273-4 hypothetical protein YP_264119.1 999127 R 259536 CDS YP_264120.1 71065393 3514333 complement(1000960..1002543) 1 NC_007204.1 Whether this protein is functional is unknown, both functions are coded for separately elsewhere in the genome (or2386 and or0752).; bifunctional ribonuclease HI/DNA polymerase III, epsilon subunit 1002543 3514333 Psyc_0833 Psychrobacter arcticus 273-4 bifunctional ribonuclease HI/DNA polymerase III, epsilon subunit YP_264120.1 1000960 R 259536 CDS YP_264121.1 71065394 3514334 1002958..1003515 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.529 at residue 31; hypothetical protein 1003515 3514334 Psyc_0834 Psychrobacter arcticus 273-4 hypothetical protein YP_264121.1 1002958 D 259536 CDS YP_264122.1 71065395 3514335 1003620..1003925 1 NC_007204.1 3 transmembrane helices; hypothetical protein 1003925 3514335 Psyc_0835 Psychrobacter arcticus 273-4 hypothetical protein YP_264122.1 1003620 D 259536 CDS YP_264123.1 71065396 3514336 complement(1004072..1004575) 1 NC_007204.1 hypothetical protein 1004575 3514336 Psyc_0836 Psychrobacter arcticus 273-4 hypothetical protein YP_264123.1 1004072 R 259536 CDS YP_264124.1 71065397 3514337 1004691..1005935 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.950) with cleavage site probability 0.553 at residue 33; hypothetical protein 1005935 3514337 Psyc_0837 Psychrobacter arcticus 273-4 hypothetical protein YP_264124.1 1004691 D 259536 CDS YP_264125.1 71065398 3514338 1006137..1006550 1 NC_007204.1 class I peptide chain release factor 1006550 3514338 Psyc_0838 Psychrobacter arcticus 273-4 class I peptide chain release factor YP_264125.1 1006137 D 259536 CDS YP_264126.1 71065399 3514339 complement(1006765..1007964) 1 NC_007204.1 sugar efflux transporter 1007964 sotB 3514339 sotB Psychrobacter arcticus 273-4 sugar efflux transporter YP_264126.1 1006765 R 259536 CDS YP_264127.1 71065400 3514340 1008223..1008915 1 NC_007204.1 Citation: Newman JD, Anthony JR, Donohue TJ. The importance of zinc-binding to the function of Rhodobacter sphaeroides ChrR as an anti-sigma factor. J Mol Biol. 2001 Oct 26;313(3):485-99. PMID: 11676534 [PubMed - indexed for MEDLINE]; anti-sigma factor, ChrR 1008915 chrR 3514340 chrR Psychrobacter arcticus 273-4 anti-sigma factor, ChrR YP_264127.1 1008223 D 259536 CDS YP_264128.1 71065401 3514341 1008905..1010041 1 NC_007204.1 monoamine oxidase 1010041 3514341 Psyc_0841 Psychrobacter arcticus 273-4 monoamine oxidase YP_264128.1 1008905 D 259536 CDS YP_264129.1 71065402 3514342 1010532..1011188 1 NC_007204.1 glutathione S-transferase 1011188 3514342 Psyc_0842 Psychrobacter arcticus 273-4 glutathione S-transferase YP_264129.1 1010532 D 259536 CDS YP_264130.1 71065403 3514343 1011764..1012444 1 NC_007204.1 hypothetical protein 1012444 3514343 Psyc_0843 Psychrobacter arcticus 273-4 hypothetical protein YP_264130.1 1011764 D 259536 CDS YP_264131.1 71065404 3514344 1012723..1013457 1 NC_007204.1 hypothetical protein 1013457 3514344 Psyc_0844 Psychrobacter arcticus 273-4 hypothetical protein YP_264131.1 1012723 D 259536 CDS YP_264132.1 71065405 3514345 1013745..1014755 1 NC_007204.1 hypothetical protein 1014755 3514345 Psyc_0845 Psychrobacter arcticus 273-4 hypothetical protein YP_264132.1 1013745 D 259536 CDS YP_264133.1 71065406 3514346 1014823..1015860 1 NC_007204.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1015860 metE 3514346 metE Psychrobacter arcticus 273-4 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_264133.1 1014823 D 259536 CDS YP_264134.1 71065407 3514347 1016059..1016574 1 NC_007204.1 flavin reductase 1016574 3514347 Psyc_0847 Psychrobacter arcticus 273-4 flavin reductase YP_264134.1 1016059 D 259536 CDS YP_264135.1 71065408 3514348 1016772..1017596 1 NC_007204.1 8 transmembrane domains found; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.870) with cleavage site probability 0.699 at residue 22; transmembrane protein 1017596 3514348 Psyc_0848 Psychrobacter arcticus 273-4 transmembrane protein YP_264135.1 1016772 D 259536 CDS YP_264136.1 71065409 3514349 complement(1017662..1018411) 1 NC_007204.1 transposase OrfB 1018411 3514349 Psyc_0849 Psychrobacter arcticus 273-4 transposase OrfB YP_264136.1 1017662 R 259536 CDS YP_264137.1 71065410 3514350 complement(1018483..1018749) 1 NC_007204.1 IS3 family transposase 1018749 3514350 Psyc_0850 Psychrobacter arcticus 273-4 IS3 family transposase YP_264137.1 1018483 R 259536 CDS YP_264138.1 71065411 3514351 complement(1018864..1019277) 1 NC_007204.1 thioesterase 1019277 3514351 Psyc_0851 Psychrobacter arcticus 273-4 thioesterase YP_264138.1 1018864 R 259536 CDS YP_264139.1 71065412 3514352 complement(1019438..1020337) 1 NC_007204.1 also has a SMP-30 domain but has low identity hit from Blast; gluconolactonase 1020337 3514352 Psyc_0852 Psychrobacter arcticus 273-4 gluconolactonase YP_264139.1 1019438 R 259536 CDS YP_264140.1 71065413 3514353 complement(1020389..1021552) 1 NC_007204.1 iron-containing alcohol dehydrogenase 1021552 3514353 Psyc_0853 Psychrobacter arcticus 273-4 iron-containing alcohol dehydrogenase YP_264140.1 1020389 R 259536 CDS YP_264141.1 71065414 3514354 1021941..1022993 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.906) with cleavage site probability 0.566 at residue 25; TRAP family periplasmic substrate binding subunit 1022993 3514354 Psyc_0854 Psychrobacter arcticus 273-4 TRAP family periplasmic substrate binding subunit YP_264141.1 1021941 D 259536 CDS YP_264142.1 71065415 3514355 1023566..1024564 1 NC_007204.1 catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; 23S rRNA pseudouridine synthase F 1024564 3514355 Psyc_0855 Psychrobacter arcticus 273-4 23S rRNA pseudouridine synthase F YP_264142.1 1023566 D 259536 CDS YP_264143.1 71065416 3514356 complement(1024632..1024847) 1 NC_007204.1 hypothetical protein 1024847 3514356 Psyc_0856 Psychrobacter arcticus 273-4 hypothetical protein YP_264143.1 1024632 R 259536 CDS YP_264144.1 71065417 3514357 1024993..1025271 1 NC_007204.1 peptidyl-prolyl isomerase 1025271 3514357 Psyc_0857 Psychrobacter arcticus 273-4 peptidyl-prolyl isomerase YP_264144.1 1024993 D 259536 CDS YP_264145.1 71065418 3514858 1025921..1027591 1 NC_007204.1 pyruvate decarboxylase 1027591 pdc 3514858 pdc Psychrobacter arcticus 273-4 pyruvate decarboxylase YP_264145.1 1025921 D 259536 CDS YP_264146.1 71065419 3514859 complement(1028108..1028854) 1 NC_007204.1 weak rbs. Predicted by glimmer and critica.; hypothetical protein 1028854 3514859 Psyc_0859 Psychrobacter arcticus 273-4 hypothetical protein YP_264146.1 1028108 R 259536 CDS YP_264147.1 71065420 3514860 1029827..1030516 1 NC_007204.1 hypothetical protein 1030516 3514860 Psyc_0860 Psychrobacter arcticus 273-4 hypothetical protein YP_264147.1 1029827 D 259536 CDS YP_264148.1 71065421 3514861 1030628..1030963 1 NC_007204.1 hypothetical protein 1030963 3514861 Psyc_0861 Psychrobacter arcticus 273-4 hypothetical protein YP_264148.1 1030628 D 259536 CDS YP_264149.1 71065422 3514862 1031025..1031432 1 NC_007204.1 hypothetical protein 1031432 3514862 Psyc_0862 Psychrobacter arcticus 273-4 hypothetical protein YP_264149.1 1031025 D 259536 CDS YP_264150.1 71065423 3514863 complement(1031429..1032238) 1 NC_007204.1 Integrase, catalytic domain; transposase orfAB 1032238 3514863 Psyc_0863 Psychrobacter arcticus 273-4 transposase orfAB YP_264150.1 1031429 R 259536 CDS YP_264151.1 71065424 3514864 complement(1032301..1032612) 1 NC_007204.1 Contains a fis type helix turn helix binding motif, which is found in a number of proteins involved in recombination and transcriptional regulation.; IS1329/IS3/IS911 transposase 1032612 3514864 Psyc_0864 Psychrobacter arcticus 273-4 IS1329/IS3/IS911 transposase YP_264151.1 1032301 R 259536 CDS YP_264152.1 71065425 3514865 1032690..1033049 1 NC_007204.1 hypothetical protein 1033049 3514865 Psyc_0865 Psychrobacter arcticus 273-4 hypothetical protein YP_264152.1 1032690 D 259536 CDS YP_264153.1 71065426 3514866 1033154..1034278 1 NC_007204.1 RBS found. predicted phage-related endonuclease; hypothetical protein 1034278 3514866 Psyc_0866 Psychrobacter arcticus 273-4 hypothetical protein YP_264153.1 1033154 D 259536 CDS YP_264154.1 71065427 3514867 1034413..1035324 1 NC_007204.1 RBS found.; hypothetical protein 1035324 3514867 Psyc_0867 Psychrobacter arcticus 273-4 hypothetical protein YP_264154.1 1034413 D 259536 CDS YP_264155.1 71065428 3514868 1035457..1035738 1 NC_007204.1 found to be upregulated in E.coli during high cell density stress; Citation: Gill RT etal. Genomic analysis of high-cell-density recombinant Escherichia coli fermentation and cell conditioning for improved recombinant protein yield. Biotechnol Bioeng. 2001 Jan 5;72(1):85-95. PMID: 11084598 [PubMed - indexed for MEDLINE]; prophage regulatory protein AlpA 1035738 alpA 3514868 alpA Psychrobacter arcticus 273-4 prophage regulatory protein AlpA YP_264155.1 1035457 D 259536 CDS YP_264156.1 71065429 3514869 1036105..1037163 1 NC_007204.1 ATP/GTP-binding site motif A (P-loop):AAA ATPase:AAA ATPase, central region; ATPase AAA 1037163 3514869 Psyc_0869 Psychrobacter arcticus 273-4 ATPase AAA YP_264156.1 1036105 D 259536 CDS YP_264157.1 71065430 3514870 1037208..1038503 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.673) with cleavage site probability 0.662 at residue 23; hypothetical protein 1038503 3514870 Psyc_0870 Psychrobacter arcticus 273-4 hypothetical protein YP_264157.1 1037208 D 259536 CDS YP_264158.1 71065431 3514871 1038503..1040275 1 NC_007204.1 hypothetical protein 1040275 3514871 Psyc_0871 Psychrobacter arcticus 273-4 hypothetical protein YP_264158.1 1038503 D 259536 CDS YP_264159.1 71065432 3514872 1040288..1040923 1 NC_007204.1 OmpA/MotB protein 1040923 motB 3514872 motB Psychrobacter arcticus 273-4 OmpA/MotB protein YP_264159.1 1040288 D 259536 CDS YP_264160.1 71065433 3514873 1040928..1041116 1 NC_007204.1 hypothetical protein 1041116 3514873 Psyc_0873 Psychrobacter arcticus 273-4 hypothetical protein YP_264160.1 1040928 D 259536 CDS YP_264161.1 71065434 3514874 1041266..1041745 1 NC_007204.1 similar to Shewanella oneidensis MR-1 hypothetical protein SO2854; hypothetical protein 1041745 3514874 Psyc_0874 Psychrobacter arcticus 273-4 hypothetical protein YP_264161.1 1041266 D 259536 CDS YP_264162.1 71065435 3514875 1041746..1042309 1 NC_007204.1 hypothetical protein 1042309 3514875 Psyc_0875 Psychrobacter arcticus 273-4 hypothetical protein YP_264162.1 1041746 D 259536 CDS YP_264163.1 71065436 3514876 complement(1042466..1043458) 1 NC_007204.1 hypothetical protein 1043458 3514876 Psyc_0876 Psychrobacter arcticus 273-4 hypothetical protein YP_264163.1 1042466 R 259536 CDS YP_264164.1 71065437 3514877 1044227..1045816 1 NC_007204.1 type I restriction-modification system, M subunit 1045816 hsdM-1 3514877 hsdM-1 Psychrobacter arcticus 273-4 type I restriction-modification system, M subunit YP_264164.1 1044227 D 259536 CDS YP_264165.1 71065438 3514878 1045806..1047080 1 NC_007204.1 type I restriction modification system methylase 1047080 3514878 Psyc_0878 Psychrobacter arcticus 273-4 type I restriction modification system methylase YP_264165.1 1045806 D 259536 CDS YP_264166.1 71065439 3514879 1047081..1048073 1 NC_007204.1 death-on-curing family protein 1048073 3514879 Psyc_0879 Psychrobacter arcticus 273-4 death-on-curing family protein YP_264166.1 1047081 D 259536 CDS YP_264167.1 71065440 3514880 1048137..1048988 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.984 at residue 23; hypothetical protein 1048988 3514880 Psyc_0880 Psychrobacter arcticus 273-4 hypothetical protein YP_264167.1 1048137 D 259536 CDS YP_264168.1 71065441 3514881 1049066..1052248 1 NC_007204.1 DEAD/DEAH box helicase:ATP/GTP-binding site motif A (P-loop)::Protein of unknown function DUF450; type I site specific deoxyribonuclease HsdR 1052248 3514881 Psyc_0881 Psychrobacter arcticus 273-4 type I site specific deoxyribonuclease HsdR YP_264168.1 1049066 D 259536 CDS YP_264169.1 71065442 3514882 1052899..1054404 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.852 at residue 20; hypothetical protein 1054404 yihD 3514882 yihD Psychrobacter arcticus 273-4 hypothetical protein YP_264169.1 1052899 D 259536 CDS YP_264170.1 71065443 3514883 1054428..1056491 1 NC_007204.1 hypothetical protein 1056491 3514883 Psyc_0883 Psychrobacter arcticus 273-4 hypothetical protein YP_264170.1 1054428 D 259536 CDS YP_264171.1 71065444 3514884 1056504..1057196 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.986 at residue 22; hypothetical protein 1057196 3514884 Psyc_0884 Psychrobacter arcticus 273-4 hypothetical protein YP_264171.1 1056504 D 259536 CDS YP_264172.1 71065445 3514885 complement(1057616..1058830) 1 NC_007204.1 also adjacent to or470, an integrase; transposase mutator family protein 1058830 3514885 Psyc_0885 Psychrobacter arcticus 273-4 transposase mutator family protein YP_264172.1 1057616 R 259536 CDS YP_264173.1 71065446 3514886 complement(1058936..1060300) 1 NC_007204.1 phage integrase 1060300 3514886 Psyc_0886 Psychrobacter arcticus 273-4 phage integrase YP_264173.1 1058936 R 259536 CDS YP_264174.1 71065447 3514888 complement(1060690..1061463) 1 NC_007204.1 has these domains: Oxidoreductase FAD/NAD(P)-binding:Flavoprotein pyridine nucleotide cytochrome reductase; NAD(P)/FAD ferrodoxin 1061463 3514888 Psyc_0887 Psychrobacter arcticus 273-4 NAD(P)/FAD ferrodoxin YP_264174.1 1060690 R 259536 CDS YP_264175.1 71065448 3514889 1061879..1062721 1 NC_007204.1 hypothetical protein 1062721 3514889 Psyc_0888 Psychrobacter arcticus 273-4 hypothetical protein YP_264175.1 1061879 D 259536 CDS YP_264176.1 71065449 3514890 1062776..1064563 1 NC_007204.1 type II secretion system protein 1064563 3514890 Psyc_0889 Psychrobacter arcticus 273-4 type II secretion system protein YP_264176.1 1062776 D 259536 CDS YP_264177.1 71065450 3514891 1064656..1065465 1 NC_007204.1 This family of proteins are related to a large superfamily of metalloenzymes.; Citation: Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T. 2000. TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export. J Biol Chem. 275(22):16717-22.; TatD family Mg-dependent DNase 1065465 tatD 3514891 tatD Psychrobacter arcticus 273-4 TatD family Mg-dependent DNase YP_264177.1 1064656 D 259536 CDS YP_264178.1 71065451 3514892 1065699..1066382 1 NC_007204.1 TetR family transcriptional regulator 1066382 3514892 Psyc_0891 Psychrobacter arcticus 273-4 TetR family transcriptional regulator YP_264178.1 1065699 D 259536 CDS YP_264179.1 71065452 3514893 complement(1066746..1067426) 1 NC_007204.1 hypothetical protein 1067426 3514893 Psyc_0892 Psychrobacter arcticus 273-4 hypothetical protein YP_264179.1 1066746 R 259536 CDS YP_264180.1 71065453 3515133 complement(1067519..1068952) 1 NC_007204.1 dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 1068952 dgt 3515133 dgt Psychrobacter arcticus 273-4 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_264180.1 1067519 R 259536 CDS YP_264181.1 71065454 3515134 complement(1069235..1070326) 1 NC_007204.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1070326 3515134 Psyc_0894 Psychrobacter arcticus 273-4 GTP-dependent nucleic acid-binding protein EngD YP_264181.1 1069235 R 259536 CDS YP_264182.1 71065455 3515135 complement(1070715..1071461) 1 NC_007204.1 good rbs. Predicted by generation, glimmer and critica.; hypothetical protein 1071461 3515135 Psyc_0895 Psychrobacter arcticus 273-4 hypothetical protein YP_264182.1 1070715 R 259536 CDS YP_264183.1 71065456 3515136 complement(1071572..1071994) 1 NC_007204.1 3 base rbs. Predicted by generation, glimmer and critica.; hypothetical protein 1071994 3515136 Psyc_0896 Psychrobacter arcticus 273-4 hypothetical protein YP_264183.1 1071572 R 259536 CDS YP_264184.1 71065457 3515137 1072587..1073732 1 NC_007204.1 MFS drug efflux pump 1073732 3515137 Psyc_0897 Psychrobacter arcticus 273-4 MFS drug efflux pump YP_264184.1 1072587 D 259536 CDS YP_264185.1 71065458 3515138 1073986..1075656 1 NC_007204.1 AMP-dependent synthetase and ligase family protein 1075656 3515138 Psyc_0898 Psychrobacter arcticus 273-4 AMP-dependent synthetase and ligase family protein YP_264185.1 1073986 D 259536 CDS YP_264186.1 71065459 3515139 1075851..1077896 1 NC_007204.1 catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; propionyl-CoA synthetase 1077896 prpE 3515139 prpE Psychrobacter arcticus 273-4 propionyl-CoA synthetase YP_264186.1 1075851 D 259536 CDS YP_264187.1 71065460 3515140 1078181..1079665 1 NC_007204.1 methylmalonate-semialdehyde dehydrogenase 1079665 mmsA 3515140 mmsA Psychrobacter arcticus 273-4 methylmalonate-semialdehyde dehydrogenase YP_264187.1 1078181 D 259536 CDS YP_264188.1 71065461 3515141 1079865..1081025 1 NC_007204.1 acyl-CoA dehydrogenase 1081025 3515141 Psyc_0901 Psychrobacter arcticus 273-4 acyl-CoA dehydrogenase YP_264188.1 1079865 D 259536 CDS YP_264189.1 71065462 3515142 1081071..1081853 1 NC_007204.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1081853 3515142 Psyc_0902 Psychrobacter arcticus 273-4 enoyl-CoA hydratase YP_264189.1 1081071 D 259536 CDS YP_264190.1 71065463 3515143 1081935..1083176 1 NC_007204.1 enoyl-CoA hydratase 1083176 3515143 Psyc_0903 Psychrobacter arcticus 273-4 enoyl-CoA hydratase YP_264190.1 1081935 D 259536 CDS YP_264191.1 71065464 3515144 1083288..1084253 1 NC_007204.1 3-hydroxyisobutyrate dehydrogenase 1084253 mmsB 3515144 mmsB Psychrobacter arcticus 273-4 3-hydroxyisobutyrate dehydrogenase YP_264191.1 1083288 D 259536 CDS YP_264192.1 71065465 3515145 complement(1084339..1085097) 1 NC_007204.1 IclR family transcriptional regulator 1085097 3515145 Psyc_0905 Psychrobacter arcticus 273-4 IclR family transcriptional regulator YP_264192.1 1084339 R 259536 CDS YP_264193.1 71065466 3515146 1085743..1086567 1 NC_007204.1 Contains an ATP binding domain; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.998 at residue 22; hypothetical protein 1086567 3515146 Psyc_0906 Psychrobacter arcticus 273-4 hypothetical protein YP_264193.1 1085743 D 259536 CDS YP_264194.1 71065467 3515147 complement(1086696..1087400) 1 NC_007204.1 phosphopantethiene-protein transferase domain-contain protein 1087400 3515147 Psyc_0907 Psychrobacter arcticus 273-4 phosphopantethiene-protein transferase domain-contain protein YP_264194.1 1086696 R 259536 CDS YP_264195.1 71065468 3515148 complement(1087658..1088176) 1 NC_007204.1 OmpA/MotB family outer membrane protein 1088176 3515148 Psyc_0908 Psychrobacter arcticus 273-4 OmpA/MotB family outer membrane protein YP_264195.1 1087658 R 259536 CDS YP_264196.1 71065469 3515149 1088686..1091334 1 NC_007204.1 Neutral zinc metallopeptidases, zinc-binding region; aminopeptidase 1091334 pepN 3515149 pepN Psychrobacter arcticus 273-4 aminopeptidase YP_264196.1 1088686 D 259536 CDS YP_264197.1 71065470 3515150 complement(1091446..1092528) 1 NC_007204.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1092528 aroF 3515150 aroF Psychrobacter arcticus 273-4 phospho-2-dehydro-3-deoxyheptonate aldolase YP_264197.1 1091446 R 259536 CDS YP_264198.1 71065471 3515151 1092893..1094194 1 NC_007204.1 lipid-A-disaccharide synthase 1094194 lpxB 3515151 lpxB Psychrobacter arcticus 273-4 lipid-A-disaccharide synthase YP_264198.1 1092893 D 259536 CDS YP_264199.1 71065472 3515152 1094240..1095103 1 NC_007204.1 ribonuclease HII 1095103 3515152 Psyc_0912 Psychrobacter arcticus 273-4 ribonuclease HII YP_264199.1 1094240 D 259536 CDS YP_264200.1 71065473 3515153 1095255..1096508 1 NC_007204.1 pyridoxal-dependent decarboxylase 1096508 3515153 Psyc_0913 Psychrobacter arcticus 273-4 pyridoxal-dependent decarboxylase YP_264200.1 1095255 D 259536 CDS YP_264201.1 71065474 3515154 1096786..1098060 1 NC_007204.1 contains following domains: ATP/GTP-binding site motif A (P-loop):Saccharopine dehydrogenase; saccharopine dehydrogenase family protein 1098060 3515154 Psyc_0914 Psychrobacter arcticus 273-4 saccharopine dehydrogenase family protein YP_264201.1 1096786 D 259536 CDS YP_264202.1 71065475 3515155 1098181..1098993 1 NC_007204.1 PhzF family phenazine biosynthesis protein 1098993 3515155 Psyc_0915 Psychrobacter arcticus 273-4 PhzF family phenazine biosynthesis protein YP_264202.1 1098181 D 259536 CDS YP_264203.1 71065476 3515156 1098997..1099329 1 NC_007204.1 predicted integral membrane protein; hypothetical protein 1099329 3515156 Psyc_0916 Psychrobacter arcticus 273-4 hypothetical protein YP_264203.1 1098997 D 259536 CDS YP_264204.1 71065477 3515157 1099786..1100391 1 NC_007204.1 hypothetical protein 1100391 3515157 Psyc_0917 Psychrobacter arcticus 273-4 hypothetical protein YP_264204.1 1099786 D 259536 CDS YP_264205.1 71065478 3515158 1100391..1100918 1 NC_007204.1 hypothetical protein 1100918 3515158 Psyc_0918 Psychrobacter arcticus 273-4 hypothetical protein YP_264205.1 1100391 D 259536 CDS YP_264206.1 71065479 3515159 1100965..1102716 1 NC_007204.1 The mutL protein binds to mutS, which recognizes and binds to mismatches in DNA duplexes. The mutS-mutL-DNA complex stimulates mutH to cleave the unmethylated DNA strand at the GATC sequence.; Contains following domains: DNA mismatch repair protein:ATP-binding region, ATPase-like.; DNA mismatch repair protein MutL 1102716 mutL 3515159 mutL Psychrobacter arcticus 273-4 DNA mismatch repair protein MutL YP_264206.1 1100965 D 259536 CDS YP_264207.1 71065480 3515160 1102782..1104041 1 NC_007204.1 contains full domains: ATP/GTP-binding site motif A (P-loop):tRNA isopentenyltransferase; tRNA delta-2-isopentenylpyrophosphate transferase 1104041 miaA 3515160 miaA Psychrobacter arcticus 273-4 tRNA delta-2-isopentenylpyrophosphate transferase YP_264207.1 1102782 D 259536 CDS YP_264208.1 71065481 3515161 1104622..1105173 1 NC_007204.1 RNA-binding protein Hfq 1105173 3515161 Psyc_0921 Psychrobacter arcticus 273-4 RNA-binding protein Hfq YP_264208.1 1104622 D 259536 CDS YP_264209.1 71065482 3515162 1105463..1106455 1 NC_007204.1 sugar isomerase 1106455 kpsF 3515162 kpsF Psychrobacter arcticus 273-4 sugar isomerase YP_264209.1 1105463 D 259536 CDS YP_264210.1 71065483 3515163 1106495..1107061 1 NC_007204.1 phosphatase 1107061 3515163 Psyc_0923 Psychrobacter arcticus 273-4 phosphatase YP_264210.1 1106495 D 259536 CDS YP_264211.1 71065484 3515164 1107058..1107642 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.636) with cleavage site probability 0.578 at residue 26; hypothetical protein 1107642 3515164 Psyc_0924 Psychrobacter arcticus 273-4 hypothetical protein YP_264211.1 1107058 D 259536 CDS YP_264212.1 71065485 3515165 1107718..1108287 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.997) with cleavage site probability 0.959 at residue 41; OstA-like protein 1108287 3515165 Psyc_0925 Psychrobacter arcticus 273-4 OstA-like protein YP_264212.1 1107718 D 259536 CDS YP_264213.1 71065486 3515166 1108392..1109189 1 NC_007204.1 ABC transporter ATPase 1109189 3515166 Psyc_0926 Psychrobacter arcticus 273-4 ABC transporter ATPase YP_264213.1 1108392 D 259536 CDS YP_264214.1 71065487 3515167 1109596..1111044 1 NC_007204.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1111044 radA 3515167 radA Psychrobacter arcticus 273-4 DNA repair protein RadA YP_264214.1 1109596 D 259536 CDS YP_264215.1 71065488 3515168 complement(1111229..1111849) 1 NC_007204.1 lipoprotein 1111849 3515168 Psyc_0928 Psychrobacter arcticus 273-4 lipoprotein YP_264215.1 1111229 R 259536 CDS YP_264216.1 71065489 3515169 complement(1112910..1114052) 1 NC_007204.1 rod shape determining protein 1114052 rodA 3515169 rodA Psychrobacter arcticus 273-4 rod shape determining protein YP_264216.1 1112910 R 259536 CDS YP_264217.1 71065490 3515170 1114315..1115244 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.991) with cleavage site probability 0.990 at residue 31; hypothetical protein 1115244 3515170 Psyc_0930 Psychrobacter arcticus 273-4 hypothetical protein YP_264217.1 1114315 D 259536 CDS YP_264218.1 71065491 3515171 complement(1115468..1117054) 1 NC_007204.1 insulinase-like peptidase 1117054 3515171 Psyc_0931 Psychrobacter arcticus 273-4 insulinase-like peptidase YP_264218.1 1115468 R 259536 CDS YP_264219.1 71065492 3514894 complement(1117258..1118727) 1 NC_007204.1 insulinase-like peptidase 1118727 3514894 Psyc_0932 Psychrobacter arcticus 273-4 insulinase-like peptidase YP_264219.1 1117258 R 259536 CDS YP_264220.1 71065493 3514895 1119138..1120019 1 NC_007204.1 There are 9 addittional ORFs identical to this one.; IS4 family transposase 1120019 3514895 Psyc_0933 Psychrobacter arcticus 273-4 IS4 family transposase YP_264220.1 1119138 D 259536 CDS YP_264221.1 71065494 3514896 1120374..1121810 1 NC_007204.1 GTP-binding signal recognition particle (SRP54) G-domain:ATP/GTP-binding site motif A (P-loop):AAA ATPase; signal recognition particle-docking protein FtsY 1121810 ftsY 3514896 ftsY Psychrobacter arcticus 273-4 signal recognition particle-docking protein FtsY YP_264221.1 1120374 D 259536 CDS YP_264222.1 71065495 3514897 1121876..1122448 1 NC_007204.1 methylated-DNA--protein-cysteine methyltransferase 1122448 3514897 Psyc_0935 Psychrobacter arcticus 273-4 methylated-DNA--protein-cysteine methyltransferase YP_264222.1 1121876 D 259536 CDS YP_264223.1 71065496 3514898 1122572..1122952 1 NC_007204.1 transposase orfA 1122952 3514898 Psyc_0936 Psychrobacter arcticus 273-4 transposase orfA YP_264223.1 1122572 D 259536 CDS YP_264224.1 71065497 3514899 1123087..1123791 1 NC_007204.1 transposase OrfB 1123791 3514899 Psyc_0937 Psychrobacter arcticus 273-4 transposase OrfB YP_264224.1 1123087 D 259536 CDS YP_264225.1 71065498 3514900 complement(1123872..1124621) 1 NC_007204.1 Protein of unknown function DUF28 Hits to yebC of E.coli but that is called a conserved hypothetical too; hypothetical protein 1124621 3514900 Psyc_0938 Psychrobacter arcticus 273-4 hypothetical protein YP_264225.1 1123872 R 259536 CDS YP_264226.1 71065499 3514901 1124978..1125808 1 NC_007204.1 VIC family potassium channel protein 1125808 3514901 Psyc_0939 Psychrobacter arcticus 273-4 VIC family potassium channel protein YP_264226.1 1124978 D 259536 CDS YP_264227.1 71065500 3514902 complement(1125868..1127169) 1 NC_007204.1 ABC1 binding domain; from interpro: E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins.; hypothetical protein 1127169 3514902 Psyc_0940 Psychrobacter arcticus 273-4 hypothetical protein YP_264227.1 1125868 R 259536 CDS YP_264228.1 71065501 3514903 complement(1127348..1127884) 1 NC_007204.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1127884 aroQ 3514903 aroQ Psychrobacter arcticus 273-4 3-dehydroquinate dehydratase YP_264228.1 1127348 R 259536 CDS YP_264229.1 71065502 3514904 1128371..1128586 1 NC_007204.1 contains the cold shock DNA-binding domain 79% homology to capB; Citation: Michel V, Lehoux I, Depret G, Anglade P, Labadie J, Hebraud M. The cold shock response of the psychrotrophic bacterium Pseudomonas fragi involves four low-molecular-mass nucleic acid-binding proteins. J Bacteriol. 1997 Dec;179(23):7331-42. PMID: 93; cold-shock DNA-binding protein family protein 1128586 capB 3514904 capB Psychrobacter arcticus 273-4 cold-shock DNA-binding protein family protein YP_264229.1 1128371 D 259536 CDS YP_264230.1 71065503 3514905 1128808..1129998 1 NC_007204.1 ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop); ATP-dependent RNA helicase 1129998 rhlB 3514905 rhlB Psychrobacter arcticus 273-4 ATP-dependent RNA helicase YP_264230.1 1128808 D 259536 CDS YP_264231.1 71065504 3514906 complement(1130049..1130930) 1 NC_007204.1 There are 10 repeats of this sequence; IS4 family transposase 1130930 3514906 Psyc_0944 Psychrobacter arcticus 273-4 IS4 family transposase YP_264231.1 1130049 R 259536 CDS YP_264232.1 71065505 3514907 complement(1131278..1132096) 1 NC_007204.1 hypothetical protein 1132096 3514907 Psyc_0945 Psychrobacter arcticus 273-4 hypothetical protein YP_264232.1 1131278 R 259536 CDS YP_264233.1 71065506 3514908 complement(1132194..1132496) 1 NC_007204.1 hypothetical protein 1132496 3514908 Psyc_0946 Psychrobacter arcticus 273-4 hypothetical protein YP_264233.1 1132194 R 259536 CDS YP_264234.1 71065507 3514909 complement(1132623..1133420) 1 NC_007204.1 Protein of unknown function DUF218 domain; hypothetical protein 1133420 3514909 Psyc_0947 Psychrobacter arcticus 273-4 hypothetical protein YP_264234.1 1132623 R 259536 CDS YP_264235.1 71065508 3514910 complement(1133386..1134507) 1 NC_007204.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1134507 murB 3514910 murB Psychrobacter arcticus 273-4 UDP-N-acetylenolpyruvoylglucosamine reductase YP_264235.1 1133386 R 259536 CDS YP_264236.1 71065509 3514911 complement(1134613..1135107) 1 NC_007204.1 low molecular weight phosphotyrosine protein phosphatase 1135107 3514911 Psyc_0949 Psychrobacter arcticus 273-4 low molecular weight phosphotyrosine protein phosphatase YP_264236.1 1134613 R 259536 CDS YP_264237.1 71065510 3514912 complement(1135339..1135779) 1 NC_007204.1 S4 paralog; heat shock RNA-binding protein 1135779 3514912 Psyc_0950 Psychrobacter arcticus 273-4 heat shock RNA-binding protein YP_264237.1 1135339 R 259536 CDS YP_264238.1 71065511 3514358 complement(1136091..1137644) 1 NC_007204.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 1137644 ilvA 3514358 ilvA Psychrobacter arcticus 273-4 threonine dehydratase YP_264238.1 1136091 R 259536 CDS YP_264239.1 71065512 3514359 1137936..1138310 1 NC_007204.1 ArsR family transcriptional regulator 1138310 3514359 Psyc_0952 Psychrobacter arcticus 273-4 ArsR family transcriptional regulator YP_264239.1 1137936 D 259536 CDS YP_264240.1 71065513 3514360 1138370..1138780 1 NC_007204.1 arsenate reductase 1138780 3514360 Psyc_0953 Psychrobacter arcticus 273-4 arsenate reductase YP_264240.1 1138370 D 259536 CDS YP_264241.1 71065514 3514361 1138764..1139555 1 NC_007204.1 NADPH-dependent FMN reductase 1139555 arsH 3514361 arsH Psychrobacter arcticus 273-4 NADPH-dependent FMN reductase YP_264241.1 1138764 D 259536 CDS YP_264242.1 71065515 3514362 1139785..1141089 1 NC_007204.1 arsenite-antimonite efflux pump ArsB 1141089 arsB 3514362 arsB Psychrobacter arcticus 273-4 arsenite-antimonite efflux pump ArsB YP_264242.1 1139785 D 259536 CDS YP_264243.1 71065516 3514363 1141236..1141895 1 NC_007204.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1141895 rpiA 3514363 rpiA Psychrobacter arcticus 273-4 ribose-5-phosphate isomerase A YP_264243.1 1141236 D 259536 CDS YP_264244.1 71065517 3514364 complement(1142154..1143077) 1 NC_007204.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1143077 argF 3514364 argF Psychrobacter arcticus 273-4 ornithine carbamoyltransferase YP_264244.1 1142154 R 259536 CDS YP_264245.1 71065518 3514365 complement(1143289..1144395) 1 NC_007204.1 inding-protein-dependent transport systems inner membrane component:; alanine racemase 1144395 alr 3514365 alr Psychrobacter arcticus 273-4 alanine racemase YP_264245.1 1143289 R 259536 CDS YP_264246.1 71065519 3514366 complement(1144536..1145939) 1 NC_007204.1 The N-terminal domain is required both for interaction with other proteins in the primosome and for DnaB helicase activity. The C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.; primary replicative DNA helicase 1145939 dnaB 3514366 dnaB Psychrobacter arcticus 273-4 primary replicative DNA helicase YP_264246.1 1144536 R 259536 CDS YP_264247.1 71065520 3514367 1146400..1147497 1 NC_007204.1 pyridoxal phosphate biosynthetic protein 1147497 pdxA 3514367 pdxA Psychrobacter arcticus 273-4 pyridoxal phosphate biosynthetic protein YP_264247.1 1146400 D 259536 CDS YP_264248.1 71065521 3514368 1147667..1148530 1 NC_007204.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1148530 ksgA 3514368 ksgA Psychrobacter arcticus 273-4 dimethyladenosine transferase YP_264248.1 1147667 D 259536 CDS YP_264249.1 71065522 3514369 1148674..1149516 1 NC_007204.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 1149516 apaH 3514369 apaH Psychrobacter arcticus 273-4 diadenosine tetraphosphatase YP_264249.1 1148674 D 259536 CDS YP_264250.1 71065523 3514370 complement(1149562..1152042) 1 NC_007204.1 site-specific recombinase 1152042 3514370 Psyc_0963 Psychrobacter arcticus 273-4 site-specific recombinase YP_264250.1 1149562 R 259536 CDS YP_264251.1 71065524 3514371 complement(1152380..1154164) 1 NC_007204.1 one sugar transporter domain likely involved in binding since membrane transporter proteins have 12 of these domains; acyl-CoA dehydrogenase 1154164 3514371 Psyc_0964 Psychrobacter arcticus 273-4 acyl-CoA dehydrogenase YP_264251.1 1152380 R 259536 CDS YP_264252.1 71065525 3514372 complement(1154635..1156428) 1 NC_007204.1 contains central domain and c- terminus addtional sequences as seen is Acientobacter; acyl-CoA dehydrogenase 1156428 3514372 Psyc_0965 Psychrobacter arcticus 273-4 acyl-CoA dehydrogenase YP_264252.1 1154635 R 259536 CDS YP_264253.1 71065526 3514373 complement(1157154..1158038) 1 NC_007204.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1158038 3514373 Psyc_0966 Psychrobacter arcticus 273-4 16S ribosomal RNA methyltransferase RsmE YP_264253.1 1157154 R 259536 CDS YP_264254.1 71065527 3514374 complement(1158310..1159155) 1 NC_007204.1 Conversion of 5, 10 methylenetetrahydrofolate to 5-methyltetrahydrofolate is a prerequisite for donation of that methyl group to homocysteine -> methionine.; methylenetetrahydrofolate reductase 1159155 metF 3514374 metF Psychrobacter arcticus 273-4 methylenetetrahydrofolate reductase YP_264254.1 1158310 R 259536 CDS YP_264255.1 71065528 3514375 complement(1159169..1160593) 1 NC_007204.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 1160593 ahcY 3514375 ahcY Psychrobacter arcticus 273-4 S-adenosyl-L-homocysteine hydrolase YP_264255.1 1159169 R 259536 CDS YP_264256.1 71065529 3514376 complement(1160914..1162851) 1 NC_007204.1 TonB dependent transporter; outer membrane receptor for transport of vitamin B 1162851 btuB 3514376 btuB Psychrobacter arcticus 273-4 outer membrane receptor for transport of vitamin B YP_264256.1 1160914 R 259536 CDS YP_264257.1 71065530 3514377 1163157..1165109 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.989 at residue 50; small-conductance mechanosensitive ion channel 1165109 3514377 Psyc_0970 Psychrobacter arcticus 273-4 small-conductance mechanosensitive ion channel YP_264257.1 1163157 D 259536 CDS YP_264258.1 71065531 3514913 complement(1165307..1166038) 1 NC_007204.1 Contains a C-terminal MutS2 domain. Does not contain required N-terminal domain.; hypothetical protein 1166038 3514913 Psyc_0971 Psychrobacter arcticus 273-4 hypothetical protein YP_264258.1 1165307 R 259536 CDS YP_264259.1 71065532 3514914 complement(1166151..1167038) 1 NC_007204.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase 1167038 trpC 3514914 trpC Psychrobacter arcticus 273-4 indole-3-glycerol phosphate synthase YP_264259.1 1166151 R 259536 CDS YP_264260.1 71065533 3514915 complement(1167326..1168465) 1 NC_007204.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1168465 trpD 3514915 trpD Psychrobacter arcticus 273-4 anthranilate phosphoribosyltransferase YP_264260.1 1167326 R 259536 CDS YP_264261.1 71065534 3514916 complement(1168511..1169134) 1 NC_007204.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 1169134 trpG 3514916 trpG Psychrobacter arcticus 273-4 anthranilate synthase component II YP_264261.1 1168511 R 259536 CDS YP_264262.1 71065535 3514917 1169917..1171326 1 NC_007204.1 Contains adenylation site; L-glutamine synthetase 1171326 glnA 3514917 glnA Psychrobacter arcticus 273-4 L-glutamine synthetase YP_264262.1 1169917 D 259536 CDS YP_264263.1 71065536 3514918 1171657..1172475 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.998 at residue 37; hypothetical protein 1172475 3514918 Psyc_0976 Psychrobacter arcticus 273-4 hypothetical protein YP_264263.1 1171657 D 259536 CDS YP_264264.1 71065537 3514919 complement(1172655..1173371) 1 NC_007204.1 RBS found. Contains predicted signal peptidase target sequence. Contains DUF541 domain.; hypothetical protein 1173371 3514919 Psyc_0977 Psychrobacter arcticus 273-4 hypothetical protein YP_264264.1 1172655 R 259536 CDS YP_264265.1 71065538 3514921 complement(1174208..1174477) 1 NC_007204.1 hypothetical protein 1174477 3514921 Psyc_0978 Psychrobacter arcticus 273-4 hypothetical protein YP_264265.1 1174208 R 259536 CDS YP_264266.1 71065539 3514922 complement(1174464..1175015) 1 NC_007204.1 hypothetical protein 1175015 3514922 Psyc_0979 Psychrobacter arcticus 273-4 hypothetical protein YP_264266.1 1174464 R 259536 CDS YP_264267.1 71065540 3514923 complement(1175124..1176590) 1 NC_007204.1 This gene also had significant hits to phage methylases.; C-5 cytosine-specific DNA methylase 1176590 3514923 Psyc_0980 Psychrobacter arcticus 273-4 C-5 cytosine-specific DNA methylase YP_264267.1 1175124 R 259536 CDS YP_264268.1 71065541 3514924 complement(1176639..1177685) 1 NC_007204.1 RBS found.; hypothetical protein 1177685 3514924 Psyc_0981 Psychrobacter arcticus 273-4 hypothetical protein YP_264268.1 1176639 R 259536 CDS YP_264269.1 71065542 3514925 complement(1177957..1178973) 1 NC_007204.1 hypothetical protein 1178973 3514925 Psyc_0982 Psychrobacter arcticus 273-4 hypothetical protein YP_264269.1 1177957 R 259536 CDS YP_264270.1 71065543 3514926 complement(1178976..1179266) 1 NC_007204.1 good rbs. Predicted by glimmer only. 22base pair cleavage site; hypothetical protein 1179266 3514926 Psyc_0983 Psychrobacter arcticus 273-4 hypothetical protein YP_264270.1 1178976 R 259536 CDS YP_264271.1 71065544 3514927 complement(1179272..1179640) 1 NC_007204.1 good rbs. Predicted by generation, glimmer and critica.; hypothetical protein 1179640 3514927 Psyc_0984 Psychrobacter arcticus 273-4 hypothetical protein YP_264271.1 1179272 R 259536 CDS YP_264272.1 71065545 3514928 1180570..1180917 1 NC_007204.1 DNA binding protein 1180917 3514928 Psyc_0985 Psychrobacter arcticus 273-4 DNA binding protein YP_264272.1 1180570 D 259536 CDS YP_264273.1 71065546 3514929 1180939..1181484 1 NC_007204.1 Contains a metallopeptidase zinc binding site.; neutral zinc metallopeptidase 1181484 3514929 Psyc_0986 Psychrobacter arcticus 273-4 neutral zinc metallopeptidase YP_264273.1 1180939 D 259536 CDS YP_264274.1 71065547 3514930 complement(1181960..1182868) 1 NC_007204.1 Predicted by glimmer only. Good rbs; hypothetical protein 1182868 3514930 Psyc_0987 Psychrobacter arcticus 273-4 hypothetical protein YP_264274.1 1181960 R 259536 CDS YP_264275.1 71065548 3514987 complement(1182865..1183734) 1 NC_007204.1 good rbs. Predicted by glimmer and critica.; hypothetical protein 1183734 3514987 Psyc_0988 Psychrobacter arcticus 273-4 hypothetical protein YP_264275.1 1182865 R 259536 CDS YP_264276.1 71065549 3514988 complement(1184381..1185100) 1 NC_007204.1 LexA family, clan SF; S24 family peptidase 1185100 3514988 Psyc_0989 Psychrobacter arcticus 273-4 S24 family peptidase YP_264276.1 1184381 R 259536 CDS YP_264277.1 71065550 3514989 1185207..1185449 1 NC_007204.1 hypothetical protein 1185449 3514989 Psyc_0990 Psychrobacter arcticus 273-4 hypothetical protein YP_264277.1 1185207 D 259536 CDS YP_264278.1 71065551 3514990 1185452..1185841 1 NC_007204.1 hypothetical protein 1185841 3514990 Psyc_0991 Psychrobacter arcticus 273-4 hypothetical protein YP_264278.1 1185452 D 259536 CDS YP_264279.1 71065552 3514991 1186219..1187163 1 NC_007204.1 hypothetical protein 1187163 3514991 Psyc_0992 Psychrobacter arcticus 273-4 hypothetical protein YP_264279.1 1186219 D 259536 CDS YP_264280.1 71065553 3514992 1187192..1187710 1 NC_007204.1 hypothetical protein 1187710 3514992 Psyc_0993 Psychrobacter arcticus 273-4 hypothetical protein YP_264280.1 1187192 D 259536 CDS YP_264281.1 71065554 3514993 1187937..1188281 1 NC_007204.1 strong ribosomal binding site, predicted by glimmer and critica; hypothetical protein 1188281 3514993 Psyc_0994 Psychrobacter arcticus 273-4 hypothetical protein YP_264281.1 1187937 D 259536 CDS YP_264282.1 71065555 3514994 1188334..1188903 1 NC_007204.1 hypothetical protein 1188903 3514994 Psyc_0995 Psychrobacter arcticus 273-4 hypothetical protein YP_264282.1 1188334 D 259536 CDS YP_264283.1 71065556 3514995 1188974..1189789 1 NC_007204.1 hypothetical protein 1189789 3514995 Psyc_0996 Psychrobacter arcticus 273-4 hypothetical protein YP_264283.1 1188974 D 259536 CDS YP_264284.1 71065557 3514996 1189792..1190223 1 NC_007204.1 hypothetical protein 1190223 3514996 Psyc_0997 Psychrobacter arcticus 273-4 hypothetical protein YP_264284.1 1189792 D 259536 CDS YP_264285.1 71065558 3514998 complement(1191327..1191887) 1 NC_007204.1 Phage related; hypothetical protein 1191887 3514998 Psyc_0998 Psychrobacter arcticus 273-4 hypothetical protein YP_264285.1 1191327 R 259536 CDS YP_264286.1 71065559 3514999 1191891..1192469 1 NC_007204.1 transposase 1192469 3514999 Psyc_0999 Psychrobacter arcticus 273-4 transposase YP_264286.1 1191891 D 259536 CDS YP_264287.1 71065560 3515000 1192502..1192975 1 NC_007204.1 phage protein 1192975 3515000 Psyc_1000 Psychrobacter arcticus 273-4 phage protein YP_264287.1 1192502 D 259536 CDS YP_264288.1 71065561 3515001 1192956..1194221 1 NC_007204.1 PBSX family phage terminase large subunit 1194221 3515001 Psyc_1001 Psychrobacter arcticus 273-4 PBSX family phage terminase large subunit YP_264288.1 1192956 D 259536 CDS YP_264289.1 71065562 3515002 1194218..1195735 1 NC_007204.1 Mu-like prophage protein 1195735 3515002 Psyc_1002 Psychrobacter arcticus 273-4 Mu-like prophage protein YP_264289.1 1194218 D 259536 CDS YP_264290.1 71065563 3515003 1195738..1196535 1 NC_007204.1 phagehead morphogenesis protein, SPP1 gp7 1196535 3515003 Psyc_1003 Psychrobacter arcticus 273-4 phagehead morphogenesis protein, SPP1 gp7 YP_264290.1 1195738 D 259536 CDS YP_264291.1 71065564 3515004 1197089..1198297 1 NC_007204.1 serine peptidase 1198297 3515004 Psyc_1004 Psychrobacter arcticus 273-4 serine peptidase YP_264291.1 1197089 D 259536 CDS YP_264292.1 71065565 3515005 1198297..1198674 1 NC_007204.1 hypothetical protein 1198674 3515005 Psyc_1005 Psychrobacter arcticus 273-4 hypothetical protein YP_264292.1 1198297 D 259536 CDS YP_264293.1 71065566 3515006 1198686..1199780 1 NC_007204.1 hypothetical protein 1199780 3515006 Psyc_1006 Psychrobacter arcticus 273-4 hypothetical protein YP_264293.1 1198686 D 259536 CDS YP_264294.1 71065567 3515007 1199836..1200120 1 NC_007204.1 hypothetical protein 1200120 3515007 Psyc_1007 Psychrobacter arcticus 273-4 hypothetical protein YP_264294.1 1199836 D 259536 CDS YP_264295.1 71065568 3515008 1200124..1200561 1 NC_007204.1 prophage protein gp36 1200561 3515008 Psyc_1008 Psychrobacter arcticus 273-4 prophage protein gp36 YP_264295.1 1200124 D 259536 CDS YP_264296.1 71065569 3515009 1200578..1200994 1 NC_007204.1 bacteriophage ( tail completion) protein 1200994 3515009 Psyc_1009 Psychrobacter arcticus 273-4 bacteriophage ( tail completion) protein YP_264296.1 1200578 D 259536 CDS YP_264297.1 71065570 3515010 1200991..1201416 1 NC_007204.1 hypothetical protein 1201416 3515010 Psyc_1010 Psychrobacter arcticus 273-4 hypothetical protein YP_264297.1 1200991 D 259536 CDS YP_264298.1 71065571 3515011 1201429..1202175 1 NC_007204.1 hypothetical protein 1202175 3515011 Psyc_1011 Psychrobacter arcticus 273-4 hypothetical protein YP_264298.1 1201429 D 259536 CDS YP_264299.1 71065572 3515012 1202316..1202651 1 NC_007204.1 hypothetical protein 1202651 3515012 Psyc_1012 Psychrobacter arcticus 273-4 hypothetical protein YP_264299.1 1202316 D 259536 CDS YP_264300.1 71065573 3515013 1202648..1203022 1 NC_007204.1 hypothetical protein 1203022 3515013 Psyc_1013 Psychrobacter arcticus 273-4 hypothetical protein YP_264300.1 1202648 D 259536 CDS YP_264301.1 71065574 3515014 1203019..1204227 1 NC_007204.1 hypothetical protein 1204227 3515014 Psyc_1014 Psychrobacter arcticus 273-4 hypothetical protein YP_264301.1 1203019 D 259536 CDS YP_264302.1 71065575 3515015 1204229..1204480 1 NC_007204.1 hypothetical protein 1204480 3515015 Psyc_1015 Psychrobacter arcticus 273-4 hypothetical protein YP_264302.1 1204229 D 259536 CDS YP_264303.1 71065576 3515016 1204483..1204875 1 NC_007204.1 hypothetical protein 1204875 3515016 Psyc_1016 Psychrobacter arcticus 273-4 hypothetical protein YP_264303.1 1204483 D 259536 CDS YP_264304.1 71065577 3515017 1204939..1205370 1 NC_007204.1 hypothetical protein 1205370 3515017 Psyc_1017 Psychrobacter arcticus 273-4 hypothetical protein YP_264304.1 1204939 D 259536 CDS YP_264305.1 71065578 3515018 1206017..1209571 1 NC_007204.1 hypothetical protein 1209571 3515018 Psyc_1018 Psychrobacter arcticus 273-4 hypothetical protein YP_264305.1 1206017 D 259536 CDS YP_264306.1 71065579 3515019 1209575..1210843 1 NC_007204.1 hypothetical protein 1210843 3515019 Psyc_1019 Psychrobacter arcticus 273-4 hypothetical protein YP_264306.1 1209575 D 259536 CDS YP_264307.1 71065580 3515020 1210848..1211219 1 NC_007204.1 hypothetical protein 1211219 3515020 Psyc_1020 Psychrobacter arcticus 273-4 hypothetical protein YP_264307.1 1210848 D 259536 CDS YP_264308.1 71065581 3515021 1211216..1211560 1 NC_007204.1 hypothetical protein 1211560 3515021 Psyc_1021 Psychrobacter arcticus 273-4 hypothetical protein YP_264308.1 1211216 D 259536 CDS YP_264309.1 71065582 3515022 1211570..1213483 1 NC_007204.1 hypothetical protein 1213483 3515022 Psyc_1022 Psychrobacter arcticus 273-4 hypothetical protein YP_264309.1 1211570 D 259536 CDS YP_264310.1 71065583 3515023 1213486..1213716 1 NC_007204.1 hypothetical protein 1213716 3515023 Psyc_1023 Psychrobacter arcticus 273-4 hypothetical protein YP_264310.1 1213486 D 259536 CDS YP_264311.1 71065584 3515024 1213713..1214147 1 NC_007204.1 hypothetical protein 1214147 3515024 Psyc_1024 Psychrobacter arcticus 273-4 hypothetical protein YP_264311.1 1213713 D 259536 CDS YP_264312.1 71065585 3515025 1214150..1214284 1 NC_007204.1 hypothetical protein 1214284 3515025 Psyc_1025 Psychrobacter arcticus 273-4 hypothetical protein YP_264312.1 1214150 D 259536 CDS YP_264313.1 71065586 3515026 1214344..1214946 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.995) with cleavage site probability 0.614 at residue 27; hypothetical protein 1214946 3515026 Psyc_1026 Psychrobacter arcticus 273-4 hypothetical protein YP_264313.1 1214344 D 259536 CDS YP_264314.1 71065587 3515027 complement(1215071..1215439) 1 NC_007204.1 Predicted by generation, glimmer and critica. 3 base rbs; hypothetical protein 1215439 3515027 Psyc_1027 Psychrobacter arcticus 273-4 hypothetical protein YP_264314.1 1215071 R 259536 CDS YP_264315.1 71065588 3515028 1215620..1216393 1 NC_007204.1 hypothetical protein 1216393 3515028 Psyc_1028 Psychrobacter arcticus 273-4 hypothetical protein YP_264315.1 1215620 D 259536 CDS YP_264316.1 71065589 3515029 1216469..1216780 1 NC_007204.1 hypothetical protein 1216780 3515029 Psyc_1029 Psychrobacter arcticus 273-4 hypothetical protein YP_264316.1 1216469 D 259536 CDS YP_264317.1 71065590 3515030 1216850..1220698 1 NC_007204.1 bacteriophage tail tape meausure protein 1220698 3515030 Psyc_1030 Psychrobacter arcticus 273-4 bacteriophage tail tape meausure protein YP_264317.1 1216850 D 259536 CDS YP_264318.1 71065591 3515031 1220746..1221138 1 NC_007204.1 hypothetical protein 1221138 3515031 Psyc_1031 Psychrobacter arcticus 273-4 hypothetical protein YP_264318.1 1220746 D 259536 CDS YP_264319.1 71065592 3515032 1221190..1221807 1 NC_007204.1 bacteriophage lysozyme 1221807 3515032 Psyc_1032 Psychrobacter arcticus 273-4 bacteriophage lysozyme YP_264319.1 1221190 D 259536 CDS YP_264320.1 71065593 3515033 1221804..1222274 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.838) with cleavage site probability 0.795 at residue 31; hypothetical protein 1222274 3515033 Psyc_1033 Psychrobacter arcticus 273-4 hypothetical protein YP_264320.1 1221804 D 259536 CDS YP_264321.1 71065594 3515034 complement(1222376..1223710) 1 NC_007204.1 phage integrase 1223710 3515034 Psyc_1034 Psychrobacter arcticus 273-4 phage integrase YP_264321.1 1222376 R 259536 CDS YP_264322.1 71065595 3515035 1224328..1225233 1 NC_007204.1 hypothetical protein 1225233 3515035 Psyc_1035 Psychrobacter arcticus 273-4 hypothetical protein YP_264322.1 1224328 D 259536 CDS YP_264323.1 71065596 3515036 1225386..1226507 1 NC_007204.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1226507 serC 3515036 serC Psychrobacter arcticus 273-4 phosphoserine aminotransferase YP_264323.1 1225386 D 259536 CDS YP_264324.1 71065597 3515037 1226757..1228589 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.861 at residue 25; peptide ABC transporter periplasmic solute-binding protein 1228589 3515037 Psyc_1037 Psychrobacter arcticus 273-4 peptide ABC transporter periplasmic solute-binding protein YP_264324.1 1226757 D 259536 CDS YP_264325.1 71065598 3515038 1228674..1229453 1 NC_007204.1 hydroxyacylglutathione hydrolase 1229453 3515038 Psyc_1038 Psychrobacter arcticus 273-4 hydroxyacylglutathione hydrolase YP_264325.1 1228674 D 259536 CDS YP_264326.1 71065599 3515039 1229532..1230599 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.977 at residue 30; peptide ABC transporter inner membrane protein 1230599 3515039 Psyc_1039 Psychrobacter arcticus 273-4 peptide ABC transporter inner membrane protein YP_264326.1 1229532 D 259536 CDS YP_264327.1 71065600 3515040 1230599..1231681 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.796 at residue 63; peptide ABC transporter inner membrane protein 1231681 3515040 Psyc_1040 Psychrobacter arcticus 273-4 peptide ABC transporter inner membrane protein YP_264327.1 1230599 D 259536 CDS YP_264328.1 71065601 3515041 1231683..1233380 1 NC_007204.1 peptide ABC transporter ATPase 1233380 3515041 Psyc_1041 Psychrobacter arcticus 273-4 peptide ABC transporter ATPase YP_264328.1 1231683 D 259536 CDS YP_264329.1 71065602 3515042 1233479..1234804 1 NC_007204.1 iron-containing alcohol dehydrogenase 1234804 3515042 Psyc_1042 Psychrobacter arcticus 273-4 iron-containing alcohol dehydrogenase YP_264329.1 1233479 D 259536 CDS YP_264330.1 71065603 3515043 1234922..1236172 1 NC_007204.1 this fusion consists of methionine sulfoxide A reductase at the N-terminus and B at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion; bifunctional methionine sulfoxide reductase A/B 1236172 3515043 Psyc_1043 Psychrobacter arcticus 273-4 bifunctional methionine sulfoxide reductase A/B YP_264330.1 1234922 D 259536 CDS YP_264331.1 71065604 3515044 complement(1236323..1236934) 1 NC_007204.1 GTP cyclohydrolase 1236934 folE2 3515044 folE2 Psychrobacter arcticus 273-4 GTP cyclohydrolase YP_264331.1 1236323 R 259536 CDS YP_264332.1 71065605 3514931 1237282..1238088 1 NC_007204.1 Glucose/ribitol dehydrogenase contains this domain for substrate; enoyl-ACP reductase 1238088 fabI 3514931 fabI Psychrobacter arcticus 273-4 enoyl-ACP reductase YP_264332.1 1237282 D 259536 CDS YP_264333.1 71065606 3514932 1238200..1238895 1 NC_007204.1 48 base signalP site at N-terminus, 6 predicted transmembrane spannning helices; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.972) with cleavage site probability 0.560 at residue 26; transmembrane protein 1238895 3514932 Psyc_1046 Psychrobacter arcticus 273-4 transmembrane protein YP_264333.1 1238200 D 259536 CDS YP_264334.1 71065607 3514933 complement(1238984..1239145) 1 NC_007204.1 4 base rbs. Predicted by generation, glimmer and critica.; hypothetical protein 1239145 3514933 Psyc_1047 Psychrobacter arcticus 273-4 hypothetical protein YP_264334.1 1238984 R 259536 CDS YP_264335.1 71065608 3514934 1239514..1240935 1 NC_007204.1 DASS family divalent anion:Na(+) symporter 1240935 3514934 Psyc_1048 Psychrobacter arcticus 273-4 DASS family divalent anion:Na(+) symporter YP_264335.1 1239514 D 259536 CDS YP_264336.1 71065609 3514935 1241380..1245651 1 NC_007204.1 DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):AAA ATPase:Helicase-associated region; ATP dependent DNA/RNA helicase 1245651 hrpA 3514935 hrpA Psychrobacter arcticus 273-4 ATP dependent DNA/RNA helicase YP_264336.1 1241380 D 259536 CDS YP_264337.1 71065610 3514937 complement(1246757..1247521) 1 NC_007204.1 DMT superfamily efflux pump 1247521 3514937 Psyc_1051 Psychrobacter arcticus 273-4 DMT superfamily efflux pump YP_264337.1 1246757 R 259536 CDS YP_264338.1 71065611 3514938 1248096..1249241 1 NC_007204.1 catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1249241 3514938 Psyc_1052 Psychrobacter arcticus 273-4 3-oxoacyl-ACP synthase YP_264338.1 1248096 D 259536 CDS YP_264339.1 71065612 3514939 1249626..1250714 1 NC_007204.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1250714 prfA 3514939 prfA Psychrobacter arcticus 273-4 peptide chain release factor 1 YP_264339.1 1249626 D 259536 CDS YP_264340.1 71065613 3514940 1250966..1252510 1 NC_007204.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1252510 lysS 3514940 lysS Psychrobacter arcticus 273-4 lysyl-tRNA synthetase YP_264340.1 1250966 D 259536 CDS YP_264341.1 71065614 3514941 1252737..1254632 1 NC_007204.1 If the gene is translated completely then the tau subunit is synthesized. If translation slips or frameshifts part way through the reading frame then a stop codon is encountered, and the gamma subunit is synthesized.; DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit 1254632 dnaX 3514941 dnaX Psychrobacter arcticus 273-4 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit YP_264341.1 1252737 D 259536 CDS YP_264342.1 71065615 3514942 1254867..1255766 1 NC_007204.1 contains N' terminal HTH motif and the LysR substrate binding domain but doesn't match closely any of the known family members; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.757) with cleavage site probability 0.523 at residue 25; LysR family transcriptional regulator 1255766 3514942 Psyc_1056 Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_264342.1 1254867 D 259536 CDS YP_264343.1 71065616 3514943 complement(1255921..1257102) 1 NC_007204.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 1257102 argD 3514943 argD Psychrobacter arcticus 273-4 acetylornithine aminotransferase YP_264343.1 1255921 R 259536 CDS YP_264344.1 71065617 3514944 complement(1257166..1257363) 1 NC_007204.1 hypothetical protein 1257363 3514944 Psyc_1058 Psychrobacter arcticus 273-4 hypothetical protein YP_264344.1 1257166 R 259536 CDS YP_264345.1 71065618 3514945 1257567..1258232 1 NC_007204.1 contains hit to SAM (and some other nucleotide) binding motif over 22% of gene; methyltransferase 1258232 3514945 Psyc_1059 Psychrobacter arcticus 273-4 methyltransferase YP_264345.1 1257567 D 259536 CDS YP_264346.1 71065619 3514946 complement(1258396..1259883) 1 NC_007204.1 Citation: Interpro: This family includes ABC1 from yeast [MEDLINE:91293073] and AarF from E. coli [MEDLINE:98083065].; ABC transporter 1259883 3514946 Psyc_1060 Psychrobacter arcticus 273-4 ABC transporter YP_264346.1 1258396 R 259536 CDS YP_264347.1 71065620 3514947 complement(1260297..1261625) 1 NC_007204.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1261625 purD 3514947 purD Psychrobacter arcticus 273-4 phosphoribosylamine--glycine ligase YP_264347.1 1260297 R 259536 CDS YP_264348.1 71065621 3514948 1262062..1266921 1 NC_007204.1 Contains a strong alignment Pfam bacterial NAD glutamate dehydrogenase from Streptomyces clavuligerus; glutamate dehydrogenase 1266921 gdhA2 3514948 gdhA2 Psychrobacter arcticus 273-4 glutamate dehydrogenase YP_264348.1 1262062 D 259536 CDS YP_264349.1 71065622 3514949 complement(1267100..1271023) 1 NC_007204.1 The C subunit contains the ATPase activity of the complex.; exonuclease SbcD 1271023 sbcC 3514949 sbcC Psychrobacter arcticus 273-4 exonuclease SbcD YP_264349.1 1267100 R 259536 CDS YP_264350.1 71065623 3514950 complement(1271096..1272682) 1 NC_007204.1 exodeoxyribonuclease I 1272682 sbcD 3514950 sbcD Psychrobacter arcticus 273-4 exodeoxyribonuclease I YP_264350.1 1271096 R 259536 CDS YP_264351.1 71065624 3514951 complement(1272786..1274450) 1 NC_007204.1 uroporphyrinogen-III C-methyltransferase 1274450 cysG 3514951 cysG Psychrobacter arcticus 273-4 uroporphyrinogen-III C-methyltransferase YP_264351.1 1272786 R 259536 CDS YP_264352.1 71065625 3514952 complement(1274676..1275314) 1 NC_007204.1 phosphoadenylylsulfate reductase 1275314 3514952 Psyc_1066 Psychrobacter arcticus 273-4 phosphoadenylylsulfate reductase YP_264352.1 1274676 R 259536 CDS YP_264353.1 71065626 3514953 complement(1275365..1275961) 1 NC_007204.1 Aligns to COG3749: Uncharacterized bacterial protein.; hypothetical protein 1275961 3514953 Psyc_1067 Psychrobacter arcticus 273-4 hypothetical protein YP_264353.1 1275365 R 259536 CDS YP_264354.1 71065627 3514954 complement(1275954..1277639) 1 NC_007204.1 sulfite reductase subunit beta 1277639 cysI 3514954 cysI Psychrobacter arcticus 273-4 sulfite reductase subunit beta YP_264354.1 1275954 R 259536 CDS YP_264355.1 71065628 3514955 1278111..1279370 1 NC_007204.1 ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; sulfate adenylyltransferase 1279370 sat 3514955 sat Psychrobacter arcticus 273-4 sulfate adenylyltransferase YP_264355.1 1278111 D 259536 CDS YP_264356.1 71065629 3514956 1279739..1280923 1 NC_007204.1 ABC sulfate/thiosulfate transporter periplasmic solute-binding protein 1280923 3514956 Psyc_1070 Psychrobacter arcticus 273-4 ABC sulfate/thiosulfate transporter periplasmic solute-binding protein YP_264356.1 1279739 D 259536 CDS YP_264357.1 71065630 3514957 1281205..1282302 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.881) with cleavage site probability 0.411 at residue 34; ABC sulfate/thiosulfate transporter periplasmic solute-binding protein 1282302 3514957 Psyc_1071 Psychrobacter arcticus 273-4 ABC sulfate/thiosulfate transporter periplasmic solute-binding protein YP_264357.1 1281205 D 259536 CDS YP_264358.1 71065631 3514958 1282559..1283443 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.882) with cleavage site probability 0.663 at residue 56; ABC sulfate/thiosulfate transporter inner membrane protein CysT 1283443 cysT 3514958 cysT Psychrobacter arcticus 273-4 ABC sulfate/thiosulfate transporter inner membrane protein CysT YP_264358.1 1282559 D 259536 CDS YP_264359.1 71065632 3514959 1283443..1284375 1 NC_007204.1 ABC sulfate/thiosulfate transporter inner membrane protein CysW 1284375 cysW 3514959 cysW Psychrobacter arcticus 273-4 ABC sulfate/thiosulfate transporter inner membrane protein CysW YP_264359.1 1283443 D 259536 CDS YP_264360.1 71065633 3514960 1284382..1285191 1 NC_007204.1 ABC sulfate/thiosulfate transporter ATPase subunit CysA 1285191 cysA 3514960 cysA Psychrobacter arcticus 273-4 ABC sulfate/thiosulfate transporter ATPase subunit CysA YP_264360.1 1284382 D 259536 CDS YP_264361.1 71065634 3514961 complement(1285357..1285680) 1 NC_007204.1 helix turn helix domain supports regulatory role; Citation: Bairoch A. Nuclic Acids Res. 21: 2515- 2515 (1993) [PubMed: 8506147 ] J Biol Chem. 1996 Feb 2;271(5):2427-32.; ArsR family transcriptional regulator 1285680 arsR 3514961 arsR Psychrobacter arcticus 273-4 ArsR family transcriptional regulator YP_264361.1 1285357 R 259536 CDS YP_264362.1 71065635 3514962 1285905..1286159 1 NC_007204.1 bacterioferritin-associated ferredoxin 1286159 3514962 Psyc_1076 Psychrobacter arcticus 273-4 bacterioferritin-associated ferredoxin YP_264362.1 1285905 D 259536 CDS YP_264363.1 71065636 3514963 1286244..1286732 1 NC_007204.1 ferritin 1286732 bfrA 3514963 bfrA Psychrobacter arcticus 273-4 ferritin YP_264363.1 1286244 D 259536 CDS YP_264364.1 71065637 3514964 1286804..1287277 1 NC_007204.1 ferritin 1287277 bfr 3514964 bfr Psychrobacter arcticus 273-4 ferritin YP_264364.1 1286804 D 259536 CDS YP_264365.1 71065638 3514965 complement(1287431..1288807) 1 NC_007204.1 major facilitator superfamily multi-drug efflux pump 1288807 3514965 Psyc_1079 Psychrobacter arcticus 273-4 major facilitator superfamily multi-drug efflux pump YP_264365.1 1287431 R 259536 CDS YP_264366.1 71065639 3514966 1289068..1289910 1 NC_007204.1 YghU; B2989; one of eight glutathione transferases from E. coli; glutathione S-transferase 1289910 3514966 Psyc_1080 Psychrobacter arcticus 273-4 glutathione S-transferase YP_264366.1 1289068 D 259536 CDS YP_264367.1 71065640 3514967 1290288..1291502 1 NC_007204.1 65bp signalP site at n-terminus; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.998 at residue 65; hypothetical protein 1291502 3514967 Psyc_1081 Psychrobacter arcticus 273-4 hypothetical protein YP_264367.1 1290288 D 259536 CDS YP_264368.1 71065641 3514968 1292149..1293852 1 NC_007204.1 ATP-dependent DEAD/DEAH box RNA-helicase 1293852 3514968 Psyc_1082 Psychrobacter arcticus 273-4 ATP-dependent DEAD/DEAH box RNA-helicase YP_264368.1 1292149 D 259536 CDS YP_264369.1 71065642 3514969 1294131..1295375 1 NC_007204.1 12 transmembrane helices, Aligns with DUF819 domain HMM, RBS found; hypothetical protein 1295375 3514969 Psyc_1083 Psychrobacter arcticus 273-4 hypothetical protein YP_264369.1 1294131 D 259536 CDS YP_264370.1 71065643 3514970 complement(1295387..1296799) 1 NC_007204.1 RBS found. Contains GntR family helix-turn-helix domain.; GntR family transcriptional regulator 1296799 3514970 Psyc_1084 Psychrobacter arcticus 273-4 GntR family transcriptional regulator YP_264370.1 1295387 R 259536 CDS YP_264371.1 71065644 3514971 1297085..1298023 1 NC_007204.1 10 transmembrane helices, SignalP site; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.950) with cleavage site probability 0.945 at residue 27; DMT superfamliy efflux pump 1298023 3514971 Psyc_1085 Psychrobacter arcticus 273-4 DMT superfamliy efflux pump YP_264371.1 1297085 D 259536 CDS YP_264372.1 71065645 3514973 1299098..1299523 1 NC_007204.1 DNA-binding protein 1299523 3514973 Psyc_1087 Psychrobacter arcticus 273-4 DNA-binding protein YP_264372.1 1299098 D 259536 CDS YP_264373.1 71065646 3514974 1299592..1299813 1 NC_007204.1 RBS identified; hypothetical protein 1299813 3514974 Psyc_1088 Psychrobacter arcticus 273-4 hypothetical protein YP_264373.1 1299592 D 259536 CDS YP_264374.1 71065647 3514975 1299911..1300666 1 NC_007204.1 hypothetical protein 1300666 3514975 Psyc_1089 Psychrobacter arcticus 273-4 hypothetical protein YP_264374.1 1299911 D 259536 CDS YP_264375.1 71065648 3514976 complement(1300792..1301466) 1 NC_007204.1 weak rbs. 37 bp cleavage site predicted. Predicted by generation, glimmer and critica.; hypothetical protein 1301466 3514976 Psyc_1090 Psychrobacter arcticus 273-4 hypothetical protein YP_264375.1 1300792 R 259536 CDS YP_264376.1 71065649 3514977 1301699..1302172 1 NC_007204.1 SignalP detects a signal peptidase target sequence in the N-terminus. Good RBS found.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.710 at residue 23; hypothetical protein 1302172 3514977 Psyc_1091 Psychrobacter arcticus 273-4 hypothetical protein YP_264376.1 1301699 D 259536 CDS YP_264377.1 71065650 3514978 complement(1302357..1303616) 1 NC_007204.1 contains 11 predicted trans-membrane helices; hypothetical protein 1303616 3514978 Psyc_1092 Psychrobacter arcticus 273-4 hypothetical protein YP_264377.1 1302357 R 259536 CDS YP_264378.1 71065651 3514979 complement(1304081..1305208) 1 NC_007204.1 NADH-dependent flavin oxidoreductase 1305208 3514979 Psyc_1093 Psychrobacter arcticus 273-4 NADH-dependent flavin oxidoreductase YP_264378.1 1304081 R 259536 CDS YP_264379.1 71065652 3514980 1305370..1306284 1 NC_007204.1 has fis type and LysR helix turn helix motifs with LysR substrate domain; LysR family transcriptional regulator 1306284 3514980 Psyc_1094 Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_264379.1 1305370 D 259536 CDS YP_264380.1 71065653 3514981 1306680..1307804 1 NC_007204.1 Fic family protein 1307804 3514981 Psyc_1095 Psychrobacter arcticus 273-4 Fic family protein YP_264380.1 1306680 D 259536 CDS YP_264381.1 71065654 3514982 complement(1308064..1308486) 1 NC_007204.1 biotin carboxyl carrier protein 1308486 3514982 Psyc_1096 Psychrobacter arcticus 273-4 biotin carboxyl carrier protein YP_264381.1 1308064 R 259536 CDS YP_264382.1 71065655 3514983 complement(1308510..1309697) 1 NC_007204.1 metal Ion (Mn2+/Fe2+) transporter NRAMP family 1309697 3514983 Psyc_1097 Psychrobacter arcticus 273-4 metal Ion (Mn2+/Fe2+) transporter NRAMP family YP_264382.1 1308510 R 259536 CDS YP_264383.1 71065656 3514984 complement(1309721..1310482) 1 NC_007204.1 LamB/YcsF family protein 1310482 3514984 Psyc_1098 Psychrobacter arcticus 273-4 LamB/YcsF family protein YP_264383.1 1309721 R 259536 CDS YP_264384.1 71065657 3514985 complement(1310472..1311395) 1 NC_007204.1 allophanate hydrolase subunit 2 1311395 3514985 Psyc_1099 Psychrobacter arcticus 273-4 allophanate hydrolase subunit 2 YP_264384.1 1310472 R 259536 CDS YP_264385.1 71065658 3514986 complement(1311448..1312101) 1 NC_007204.1 allophanate hydrolase subunit 1 1312101 3514986 Psyc_1100 Psychrobacter arcticus 273-4 allophanate hydrolase subunit 1 YP_264385.1 1311448 R 259536 CDS YP_264386.1 71065659 3514799 complement(1312190..1313536) 1 NC_007204.1 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase 1313536 3514799 Psyc_1101 Psychrobacter arcticus 273-4 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase YP_264386.1 1312190 R 259536 CDS YP_264387.1 71065660 3514800 complement(1313595..1314107) 1 NC_007204.1 biotin carboxyl carrier protein 1314107 3514800 Psyc_1102 Psychrobacter arcticus 273-4 biotin carboxyl carrier protein YP_264387.1 1313595 R 259536 CDS YP_264388.1 71065661 3514801 complement(1314354..1315145) 1 NC_007204.1 RBS found.; hypothetical protein 1315145 3514801 Psyc_1103 Psychrobacter arcticus 273-4 hypothetical protein YP_264388.1 1314354 R 259536 CDS YP_264389.1 71065662 3514802 1315404..1315766 1 NC_007204.1 RBS found.; hypothetical protein 1315766 3514802 Psyc_1104 Psychrobacter arcticus 273-4 hypothetical protein YP_264389.1 1315404 D 259536 CDS YP_264390.1 71065663 3514803 1316126..1317088 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.869) with cleavage site probability 0.721 at residue 37; acyltransferase 1317088 3514803 Psyc_1105 Psychrobacter arcticus 273-4 acyltransferase YP_264390.1 1316126 D 259536 CDS YP_264391.1 71065664 3514804 1317250..1317633 1 NC_007204.1 hypothetical protein 1317633 3514804 Psyc_1106 Psychrobacter arcticus 273-4 hypothetical protein YP_264391.1 1317250 D 259536 CDS YP_264392.1 71065665 3514805 complement(1317636..1318601) 1 NC_007204.1 Predicted by generation, glimmer and critica. good rbs. 1 transmembrane helix; hypothetical protein 1318601 3514805 Psyc_1107 Psychrobacter arcticus 273-4 hypothetical protein YP_264392.1 1317636 R 259536 CDS YP_264393.1 71065666 3514806 1318828..1319841 1 NC_007204.1 LysR substrate binding domain and LysR helix- turn- helix motif; LysR family transcriptional regulator 1319841 3514806 Psyc_1108 Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_264393.1 1318828 D 259536 CDS YP_264394.1 71065667 3514807 1320129..1321415 1 NC_007204.1 metal Ion (Mn2+/Fe2+) transporter NRAMP family 1321415 3514807 Psyc_1109 Psychrobacter arcticus 273-4 metal Ion (Mn2+/Fe2+) transporter NRAMP family YP_264394.1 1320129 D 259536 CDS YP_264395.1 71065668 3514808 1321787..1322677 1 NC_007204.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 1322677 prpB 3514808 prpB Psychrobacter arcticus 273-4 2-methylisocitrate lyase YP_264395.1 1321787 D 259536 CDS YP_264396.1 71065669 3514809 1322815..1323954 1 NC_007204.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 1323954 prpC 3514809 prpC Psychrobacter arcticus 273-4 methylcitrate synthase YP_264396.1 1322815 D 259536 CDS YP_264397.1 71065670 3514810 1324169..1326826 1 NC_007204.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1326826 3514810 Psyc_1112 Psychrobacter arcticus 273-4 aconitate hydratase YP_264397.1 1324169 D 259536 CDS YP_264398.1 71065671 3514811 complement(1326940..1327233) 1 NC_007204.1 hypothetical protein 1327233 3514811 Psyc_1113 Psychrobacter arcticus 273-4 hypothetical protein YP_264398.1 1326940 R 259536 CDS YP_264399.1 71065672 3514812 complement(1327234..1327467) 1 NC_007204.1 RBS found.; hypothetical protein 1327467 3514812 Psyc_1114 Psychrobacter arcticus 273-4 hypothetical protein YP_264399.1 1327234 R 259536 CDS YP_264400.1 71065673 3514813 1327556..1328797 1 NC_007204.1 DUF453 family domain; methylitaconate delta2-delta3-isomerase 1328797 3514813 Psyc_1115 Psychrobacter arcticus 273-4 methylitaconate delta2-delta3-isomerase YP_264400.1 1327556 D 259536 CDS YP_264401.1 71065674 3514814 1329123..1329713 1 NC_007204.1 acetyltransferase 1329713 3514814 Psyc_1116 Psychrobacter arcticus 273-4 acetyltransferase YP_264401.1 1329123 D 259536 CDS YP_264402.1 71065675 3514815 1329848..1331350 1 NC_007204.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 1331350 prpD 3514815 prpD Psychrobacter arcticus 273-4 2-methylcitrate dehydratase YP_264402.1 1329848 D 259536 CDS YP_264403.1 71065676 3514816 complement(1331402..1332181) 1 NC_007204.1 C factor cell-cell signaling protein 1332181 3514816 Psyc_1118 Psychrobacter arcticus 273-4 C factor cell-cell signaling protein YP_264403.1 1331402 R 259536 CDS YP_264404.1 71065677 3514817 1332597..1334006 1 NC_007204.1 Probable integral membrane proteindue to presence of 4 transmembrane domains; hypothetical protein 1334006 3514817 Psyc_1119 Psychrobacter arcticus 273-4 hypothetical protein YP_264404.1 1332597 D 259536 CDS YP_264405.1 71065678 3514818 1334137..1335711 1 NC_007204.1 ATP/GTP binding motif; hypothetical protein 1335711 3514818 Psyc_1120 Psychrobacter arcticus 273-4 hypothetical protein YP_264405.1 1334137 D 259536 CDS YP_264406.1 71065679 3514819 complement(1335751..1336770) 1 NC_007204.1 arsenical pump-driving ATPase ArsA 1336770 arsA 3514819 arsA Psychrobacter arcticus 273-4 arsenical pump-driving ATPase ArsA YP_264406.1 1335751 R 259536 CDS YP_264407.1 71065680 3514820 complement(1336805..1337098) 1 NC_007204.1 RBS found.; hypothetical protein 1337098 3514820 Psyc_1122 Psychrobacter arcticus 273-4 hypothetical protein YP_264407.1 1336805 R 259536 CDS YP_264408.1 71065681 3514821 complement(1337222..1338901) 1 NC_007204.1 carbon starvation protein A 1338901 cstA 3514821 cstA Psychrobacter arcticus 273-4 carbon starvation protein A YP_264408.1 1337222 R 259536 CDS YP_264409.1 71065682 3514822 1339113..1339781 1 NC_007204.1 RBS found.; hypothetical protein 1339781 3514822 Psyc_1124 Psychrobacter arcticus 273-4 hypothetical protein YP_264409.1 1339113 D 259536 CDS YP_264410.1 71065683 3514823 1339891..1340454 1 NC_007204.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 1340454 hpt 3514823 hpt Psychrobacter arcticus 273-4 hypoxanthine-guanine phosphoribosyltransferase YP_264410.1 1339891 D 259536 CDS YP_264411.1 71065684 3514824 complement(1340502..1342706) 1 NC_007204.1 exonuclease V subunit alpha 1342706 recD 3514824 recD Psychrobacter arcticus 273-4 exonuclease V subunit alpha YP_264411.1 1340502 R 259536 CDS YP_264412.1 71065685 3514825 complement(1342783..1347270) 1 NC_007204.1 DNA helicase/exodeoxyribonuclease V subunit beta 1347270 recB 3514825 recB Psychrobacter arcticus 273-4 DNA helicase/exodeoxyribonuclease V subunit beta YP_264412.1 1342783 R 259536 CDS YP_264413.1 71065686 3514826 complement(1347343..1351881) 1 NC_007204.1 exoribodeoxynuclease V, gamma subunit 1351881 recC 3514826 recC Psychrobacter arcticus 273-4 exoribodeoxynuclease V, gamma subunit YP_264413.1 1347343 R 259536 CDS YP_264414.1 71065687 3514827 1352397..1352939 1 NC_007204.1 Promoter region looks good, but no RBS identified.; hypothetical protein 1352939 3514827 Psyc_1129 Psychrobacter arcticus 273-4 hypothetical protein YP_264414.1 1352397 D 259536 CDS YP_264415.1 71065688 3514828 1353012..1353830 1 NC_007204.1 SignalP detects a signal peptidase target site. The site contains a predicted transmembrane helix. No RBS consensus found.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.761) with cleavage site probability 0.604 at residue 27; hypothetical protein 1353830 3514828 Psyc_1130 Psychrobacter arcticus 273-4 hypothetical protein YP_264415.1 1353012 D 259536 CDS YP_264416.1 71065689 3514830 1354449..1354733 1 NC_007204.1 RBS found.; hypothetical protein 1354733 3514830 Psyc_1131 Psychrobacter arcticus 273-4 hypothetical protein YP_264416.1 1354449 D 259536 CDS YP_264417.1 71065690 3514831 complement(1354889..1355800) 1 NC_007204.1 All possess a potential HTH DNA-binding motif towards their N-termini; LysR family transcriptional regulator 1355800 3514831 Psyc_1132 Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_264417.1 1354889 R 259536 CDS YP_264418.1 71065691 3514832 1355987..1356439 1 NC_007204.1 4 transmembrane domains. DoxD-like. The nearest orf adjacent does not match a terminal quinol oxidase subunit II by hydropathy lot search, so this is probably not DoxD.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.985) with cleavage site probability 0.873 at residue 34; hypothetical protein 1356439 3514832 Psyc_1133 Psychrobacter arcticus 273-4 hypothetical protein YP_264418.1 1355987 D 259536 CDS YP_264419.1 71065692 3514833 1356670..1357488 1 NC_007204.1 hypothetical protein 1357488 3514833 Psyc_1134 Psychrobacter arcticus 273-4 hypothetical protein YP_264419.1 1356670 D 259536 CDS YP_264420.1 71065693 3514834 complement(1357728..1359344) 1 NC_007204.1 FAD-dependent dehydrogenase 1359344 3514834 Psyc_1135 Psychrobacter arcticus 273-4 FAD-dependent dehydrogenase YP_264420.1 1357728 R 259536 CDS YP_264421.1 71065694 3514835 1360421..1360726 1 NC_007204.1 The helix-turn-helix motif found here is found in a large family of proteins with diverse functions.; DNA-binding protein 1360726 3514835 Psyc_1136 Psychrobacter arcticus 273-4 DNA-binding protein YP_264421.1 1360421 D 259536 CDS YP_264422.1 71065695 3514836 1360745..1362001 1 NC_007204.1 hypothetical protein 1362001 3514836 Psyc_1137 Psychrobacter arcticus 273-4 hypothetical protein YP_264422.1 1360745 D 259536 CDS YP_264423.1 71065696 3514837 complement(1362462..1365242) 1 NC_007204.1 phosphoenolpyruvate carboxylase 1365242 ppc 3514837 ppc Psychrobacter arcticus 273-4 phosphoenolpyruvate carboxylase YP_264423.1 1362462 R 259536 CDS YP_264424.1 71065697 3514838 complement(1365902..1366708) 1 NC_007204.1 8 predicted transmembrane helices.; hypothetical protein 1366708 3514838 Psyc_1139 Psychrobacter arcticus 273-4 hypothetical protein YP_264424.1 1365902 R 259536 CDS YP_264425.1 71065698 3514839 complement(1366734..1367654) 1 NC_007204.1 malonyl CoA-ACP transacylase 1367654 mdcG 3514839 mdcG Psychrobacter arcticus 273-4 malonyl CoA-ACP transacylase YP_264425.1 1366734 R 259536 CDS YP_264426.1 71065699 3514840 complement(1367632..1368519) 1 NC_007204.1 ATP:dephospho-CoA triphosphoribosyl transferase 1368519 mdc 3514840 mdc Psychrobacter arcticus 273-4 ATP:dephospho-CoA triphosphoribosyl transferase YP_264426.1 1367632 R 259536 CDS YP_264427.1 71065700 3514841 complement(1368470..1369174) 1 NC_007204.1 malonate decarboxylase, subunit E 1369174 mdcE 3514841 mdcE Psychrobacter arcticus 273-4 malonate decarboxylase, subunit E YP_264427.1 1368470 R 259536 CDS YP_264428.1 71065701 3514842 complement(1369372..1370088) 1 NC_007204.1 malonate decarboxylase subunit gamma 1370088 mdcC 3514842 mdcC Psychrobacter arcticus 273-4 malonate decarboxylase subunit gamma YP_264428.1 1369372 R 259536 CDS YP_264429.1 71065702 3514843 complement(1370093..1370980) 1 NC_007204.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 1370980 mdcB 3514843 mdcB Psychrobacter arcticus 273-4 malonate decarboxylase subunit beta YP_264429.1 1370093 R 259536 CDS YP_264430.1 71065703 3514844 complement(1370973..1371290) 1 NC_007204.1 malonate decarboxylase subunit delta 1371290 mdcD 3514844 mdcD Psychrobacter arcticus 273-4 malonate decarboxylase subunit delta YP_264430.1 1370973 R 259536 CDS YP_264431.1 71065704 3514845 complement(1371312..1372967) 1 NC_007204.1 malonate decarboxylase subunit alpha 1372967 mdcA 3514845 mdcA Psychrobacter arcticus 273-4 malonate decarboxylase subunit alpha YP_264431.1 1371312 R 259536 CDS YP_264432.1 71065705 3514846 complement(1372989..1373747) 1 NC_007204.1 malonate/sodium symporter, MadM subunit 1373747 madM 3514846 madM Psychrobacter arcticus 273-4 malonate/sodium symporter, MadM subunit YP_264432.1 1372989 R 259536 CDS YP_264433.1 71065706 3514847 complement(1373823..1374227) 1 NC_007204.1 malonate/sodium symporter, MadL subunit 1374227 madL 3514847 madL Psychrobacter arcticus 273-4 malonate/sodium symporter, MadL subunit YP_264433.1 1373823 R 259536 CDS YP_264434.1 71065707 3514848 1374461..1375132 1 NC_007204.1 GntR family transcriptional regulator 1375132 mdcY 3514848 mdcY Psychrobacter arcticus 273-4 GntR family transcriptional regulator YP_264434.1 1374461 D 259536 CDS YP_264435.1 71065708 3514849 1375422..1376042 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.995 at residue 35; hypothetical protein 1376042 3514849 Psyc_1150 Psychrobacter arcticus 273-4 hypothetical protein YP_264435.1 1375422 D 259536 CDS YP_264436.1 71065709 3514850 1376133..1377488 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.998 at residue 23; cytochrome c alcohol dehydrogenase subunit 1377488 3514850 Psyc_1151 Psychrobacter arcticus 273-4 cytochrome c alcohol dehydrogenase subunit YP_264436.1 1376133 D 259536 CDS YP_264437.1 71065710 3514851 1377566..1379167 1 NC_007204.1 No indication of substrate, could be polyamine oxidase or L-amino acid oxidase; flavin monoamine oxidase related protein 1379167 3514851 Psyc_1152 Psychrobacter arcticus 273-4 flavin monoamine oxidase related protein YP_264437.1 1377566 D 259536 CDS YP_264438.1 71065711 3514852 1379247..1379903 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.992) with cleavage site probability 0.836 at residue 35; cytochrome c family protein 1379903 3514852 Psyc_1153 Psychrobacter arcticus 273-4 cytochrome c family protein YP_264438.1 1379247 D 259536 CDS YP_264439.1 71065712 3514853 complement(1380420..1381280) 1 NC_007204.1 RBS found. Aligns weakly to universal stress protein HMM.; hypothetical protein 1381280 3514853 Psyc_1154 Psychrobacter arcticus 273-4 hypothetical protein YP_264439.1 1380420 R 259536 CDS YP_264440.1 71065713 3514854 1382083..1382976 1 NC_007204.1 Homology searches provide good matches to archeal and eukaryal 5'-methylthioadenosine phosphorylase, but these enzymes are not noted to occur in bacteria.; methylthioadenosine phosphorylase 1382976 deoD 3514854 deoD Psychrobacter arcticus 273-4 methylthioadenosine phosphorylase YP_264440.1 1382083 D 259536 CDS YP_264441.1 71065714 3514855 complement(1383108..1384175) 1 NC_007204.1 Aligns well to eukaryotic methyltransferases. Contains SAM binding motif. Contains generic methyltransferase motif.; methyltransferase 1384175 3514855 Psyc_1156 Psychrobacter arcticus 273-4 methyltransferase YP_264441.1 1383108 R 259536 CDS YP_264442.1 71065715 3514856 complement(1384271..1384894) 1 NC_007204.1 Contains DUF703 domain.; hypothetical protein 1384894 3514856 Psyc_1157 Psychrobacter arcticus 273-4 hypothetical protein YP_264442.1 1384271 R 259536 CDS YP_264443.1 71065716 3514056 complement(1384982..1385722) 1 NC_007204.1 glycosyl transferase family protein 1385722 3514056 Psyc_1158 Psychrobacter arcticus 273-4 glycosyl transferase family protein YP_264443.1 1384982 R 259536 CDS YP_264444.1 71065717 3514057 complement(1385740..1386549) 1 NC_007204.1 RBS found. Contains a predicted signal peptidase target sequence.; hypothetical protein 1386549 3514057 Psyc_1159 Psychrobacter arcticus 273-4 hypothetical protein YP_264444.1 1385740 R 259536 CDS YP_264445.1 71065718 3514058 complement(1386643..1387611) 1 NC_007204.1 RBS found. Contains a weak alignment to the radical SAM superfamily domain and a cytochrome C heme-binding motif.; hypothetical protein 1387611 3514058 Psyc_1160 Psychrobacter arcticus 273-4 hypothetical protein YP_264445.1 1386643 R 259536 CDS YP_264446.1 71065719 3514059 1387860..1389590 1 NC_007204.1 5 probable transmembrane helices near to the N-terminus.; phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 1389590 3514059 Psyc_1161 Psychrobacter arcticus 273-4 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase YP_264446.1 1387860 D 259536 CDS YP_264447.1 71065720 3514060 1389665..1390366 1 NC_007204.1 two component system regulatory protein 1390366 3514060 Psyc_1162 Psychrobacter arcticus 273-4 two component system regulatory protein YP_264447.1 1389665 D 259536 CDS YP_264448.1 71065721 3514061 1390467..1391780 1 NC_007204.1 1 probable transmembrane domain.; Signal transduction histidine kinase sensor 1391780 3514061 Psyc_1163 Psychrobacter arcticus 273-4 Signal transduction histidine kinase sensor YP_264448.1 1390467 D 259536 CDS YP_264449.1 71065722 3514062 1392132..1392575 1 NC_007204.1 diacylglycerol kinase 1392575 dgkA 3514062 dgkA Psychrobacter arcticus 273-4 diacylglycerol kinase YP_264449.1 1392132 D 259536 CDS YP_264450.1 71065723 3514063 1392623..1393342 1 NC_007204.1 PAP phosphotase domain; hypothetical protein 1393342 3514063 Psyc_1165 Psychrobacter arcticus 273-4 hypothetical protein YP_264450.1 1392623 D 259536 CDS YP_264451.1 71065724 3514064 complement(1393683..1394714) 1 NC_007204.1 RBS found; hypothetical protein 1394714 3514064 Psyc_1166 Psychrobacter arcticus 273-4 hypothetical protein YP_264451.1 1393683 R 259536 CDS YP_264452.1 71065725 3514065 complement(1394831..1395301) 1 NC_007204.1 This gene occurs close proximity to six other fatty acid biosynthesis orfs.; acyl-CoA thioesterase 1395301 3514065 Psyc_1167 Psychrobacter arcticus 273-4 acyl-CoA thioesterase YP_264452.1 1394831 R 259536 CDS YP_264453.1 71065726 3514066 complement(1395400..1397094) 1 NC_007204.1 medium chain acyl-CoA ligase 1397094 3514066 Psyc_1168 Psychrobacter arcticus 273-4 medium chain acyl-CoA ligase YP_264453.1 1395400 R 259536 CDS YP_264454.1 71065727 3514067 complement(1397160..1398362) 1 NC_007204.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1398362 3514067 Psyc_1169 Psychrobacter arcticus 273-4 acetyl-CoA acetyltransferase YP_264454.1 1397160 R 259536 CDS YP_264455.1 71065728 3514068 complement(1398446..1400014) 1 NC_007204.1 converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxyacyl-CoA dehydrogenase 1400014 paaH 3514068 paaH Psychrobacter arcticus 273-4 3-hydroxyacyl-CoA dehydrogenase YP_264455.1 1398446 R 259536 CDS YP_264456.1 71065729 3514069 complement(1400092..1400868) 1 NC_007204.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1400868 3514069 Psyc_1171 Psychrobacter arcticus 273-4 enoyl-CoA hydratase YP_264456.1 1400092 R 259536 CDS YP_264457.1 71065730 3514070 1401195..1402349 1 NC_007204.1 acyl-CoA dehydrogenase 1402349 3514070 Psyc_1172 Psychrobacter arcticus 273-4 acyl-CoA dehydrogenase YP_264457.1 1401195 D 259536 CDS YP_264458.1 71065731 3514071 1402458..1403723 1 NC_007204.1 Aromatic Acid:H+ Symporter (AAHS) Family; Citation: Applied and Environmental Microbiology, October 2001, p. 4817-4827, Vol. 67, No. 10; MFS short chain dicaboxylate:H+ symporter DcaK 1403723 dcaK 3514071 dcaK Psychrobacter arcticus 273-4 MFS short chain dicaboxylate:H+ symporter DcaK YP_264458.1 1402458 D 259536 CDS YP_264459.1 71065732 3514072 1404421..1405266 1 NC_007204.1 Nearly 60% ID to other transcriptional regulators in BLAST and the HTH motif hit is also strong InterPro:buthitstoIclRfamilyoftranscriptional regulators are weak.; IclR family transcriptional regulator 1405266 3514072 Psyc_1174 Psychrobacter arcticus 273-4 IclR family transcriptional regulator YP_264459.1 1404421 D 259536 CDS YP_264460.1 71065733 3514073 complement(1405611..1407143) 1 NC_007204.1 There is no clear indicator of the exact function of this acetyl-CoA hydrolase/transferase family member.; acetyl-CoA hydrolase/transferase family protein 1407143 3514073 Psyc_1175 Psychrobacter arcticus 273-4 acetyl-CoA hydrolase/transferase family protein YP_264460.1 1405611 R 259536 CDS YP_264461.1 71065734 3514074 1407717..1409654 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 1.000 at residue 39; gamma-glutamyltransferase 1 1409654 ggt 3514074 ggt Psychrobacter arcticus 273-4 gamma-glutamyltransferase 1 YP_264461.1 1407717 D 259536 CDS YP_264462.1 71065735 3514075 1410102..1413845 1 NC_007204.1 DNA polymerase III is comprised of three tightly associated subunits, alpha, epsilon and theta.; DNA polymerase III subunit alpha 1413845 dnaE 3514075 dnaE Psychrobacter arcticus 273-4 DNA polymerase III subunit alpha YP_264462.1 1410102 D 259536 CDS YP_264463.1 71065736 3514076 1413893..1414789 1 NC_007204.1 rRNA methyltransferase SpoU family protein 1414789 3514076 Psyc_1178 Psychrobacter arcticus 273-4 rRNA methyltransferase SpoU family protein YP_264463.1 1413893 D 259536 CDS YP_264464.1 71065737 3514077 1414995..1415438 1 NC_007204.1 hypothetical protein 1415438 3514077 Psyc_1179 Psychrobacter arcticus 273-4 hypothetical protein YP_264464.1 1414995 D 259536 CDS YP_264465.1 71065738 3514078 1415628..1416539 1 NC_007204.1 Contains four hexapeptide repeat motifs.; serine O-acetyltransferase 1416539 cysE 3514078 cysE Psychrobacter arcticus 273-4 serine O-acetyltransferase YP_264465.1 1415628 D 259536 CDS YP_264466.1 71065739 3514079 complement(1416597..1417130) 1 NC_007204.1 hypothetical protein 1417130 3514079 Psyc_1181 Psychrobacter arcticus 273-4 hypothetical protein YP_264466.1 1416597 R 259536 CDS YP_264467.1 71065740 3514080 complement(1417120..1417542) 1 NC_007204.1 dihydroneopterin aldolase 1417542 folB 3514080 folB Psychrobacter arcticus 273-4 dihydroneopterin aldolase YP_264467.1 1417120 R 259536 CDS YP_264468.1 71065741 3514081 complement(1417607..1418566) 1 NC_007204.1 There are 9 transmembrane domains.; DMT superfamily efflux pump, RarD 1418566 rarD 3514081 rarD Psychrobacter arcticus 273-4 DMT superfamily efflux pump, RarD YP_264468.1 1417607 R 259536 CDS YP_264469.1 71065742 3514082 complement(1418677..1421013) 1 NC_007204.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate and catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase 1421013 3514082 Psyc_1184 Psychrobacter arcticus 273-4 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase YP_264469.1 1418677 R 259536 CDS YP_264470.1 71065743 3514083 complement(1421132..1422274) 1 NC_007204.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1422274 hisC 3514083 hisC Psychrobacter arcticus 273-4 histidinol-phosphate aminotransferase YP_264470.1 1421132 R 259536 CDS YP_264471.1 71065744 3514084 complement(1422416..1423597) 1 NC_007204.1 Contains 3 domains: chorismate mutase, prephenate dehydratase, and an ACT (amino acid synthesis regulatory domain). This enzyme is bifunctional in the phenylalanine synthesis pathway.; prephenate dehydratase 1423597 pheA 3514084 pheA Psychrobacter arcticus 273-4 prephenate dehydratase YP_264471.1 1422416 R 259536 CDS YP_264472.1 71065745 3514085 1424045..1424986 1 NC_007204.1 Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 1424986 tal 3514085 tal Psychrobacter arcticus 273-4 transaldolase B YP_264472.1 1424045 D 259536 CDS YP_264473.1 71065746 3514086 1425173..1425625 1 NC_007204.1 SignalP detects a signal peptidase target site. RBS found.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 at residue 20; hypothetical protein 1425625 3514086 Psyc_1188 Psychrobacter arcticus 273-4 hypothetical protein YP_264473.1 1425173 D 259536 CDS YP_264474.1 71065747 3514087 complement(1425845..1426414) 1 NC_007204.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1426414 apt 3514087 apt Psychrobacter arcticus 273-4 adenine phosphoribosyltransferase YP_264474.1 1425845 R 259536 CDS YP_264475.1 71065748 3514088 1426890..1427054 1 NC_007204.1 rubredoxin protein 1427054 rubA 3514088 rubA Psychrobacter arcticus 273-4 rubredoxin protein YP_264475.1 1426890 D 259536 CDS YP_264476.1 71065749 3514089 1427083..1428120 1 NC_007204.1 alpha/beta hydrolase 1428120 3514089 Psyc_1191 Psychrobacter arcticus 273-4 alpha/beta hydrolase YP_264476.1 1427083 D 259536 CDS YP_264477.1 71065750 3514090 complement(1428228..1429406) 1 NC_007204.1 RBS found. One predicted transmembrane helix. Contains a predicted signal peptidase target sequence.; hypothetical protein 1429406 3514090 Psyc_1192 Psychrobacter arcticus 273-4 hypothetical protein YP_264477.1 1428228 R 259536 CDS YP_264478.1 71065751 3514091 1429877..1430809 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.754) with cleavage site probability 0.616 at residue 29; DMT superfamily efflux pump 1430809 3514091 Psyc_1193 Psychrobacter arcticus 273-4 DMT superfamily efflux pump YP_264478.1 1429877 D 259536 CDS YP_264479.1 71065752 3514092 complement(1430942..1434148) 1 NC_007204.1 autotransporter domain-containing protein 1434148 3514092 Psyc_1194 Psychrobacter arcticus 273-4 autotransporter domain-containing protein YP_264479.1 1430942 R 259536 CDS YP_264480.1 71065753 3514093 complement(1434426..1435859) 1 NC_007204.1 xanthine/uracil symporter 1435859 3514093 Psyc_1195 Psychrobacter arcticus 273-4 xanthine/uracil symporter YP_264480.1 1434426 R 259536 CDS YP_264481.1 71065754 3514094 1436252..1437685 1 NC_007204.1 Beta chain domain at N-terminus followed closely by alpha chain to C-terminus.; L-serine ammonia-lyase 1437685 sdaA 3514094 sdaA Psychrobacter arcticus 273-4 L-serine ammonia-lyase YP_264481.1 1436252 D 259536 CDS YP_264482.1 71065755 3514095 complement(1437943..1438341) 1 NC_007204.1 Predicted by generation, glimmer and critica. 4 base rbs.; hypothetical protein 1438341 3514095 Psyc_1197 Psychrobacter arcticus 273-4 hypothetical protein YP_264482.1 1437943 R 259536 CDS YP_264483.1 71065756 3514096 complement(1438652..1439875) 1 NC_007204.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1439875 argJ 3514096 argJ Psychrobacter arcticus 273-4 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_264483.1 1438652 R 259536 CDS YP_264484.1 71065757 3514097 complement(1439948..1440772) 1 NC_007204.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 1440772 xthA 3514097 xthA Psychrobacter arcticus 273-4 exonuclease III YP_264484.1 1439948 R 259536 CDS YP_264485.1 71065758 3514098 1441088..1441654 1 NC_007204.1 thioesterase 1441654 3514098 Psyc_1200 Psychrobacter arcticus 273-4 thioesterase YP_264485.1 1441088 D 259536 CDS YP_264486.1 71065759 3514099 complement(1441922..1442791) 1 NC_007204.1 short chain dehydrogenase 1442791 3514099 Psyc_1201 Psychrobacter arcticus 273-4 short chain dehydrogenase YP_264486.1 1441922 R 259536 CDS YP_264487.1 71065760 3514100 complement(1443136..1444110) 1 NC_007204.1 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 1444110 sohB 3514100 sohB Psychrobacter arcticus 273-4 periplasmic protease YP_264487.1 1443136 R 259536 CDS YP_264488.1 71065761 3514101 1444480..1446306 1 NC_007204.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1446306 aspS 3514101 aspS Psychrobacter arcticus 273-4 aspartyl-tRNA synthetase YP_264488.1 1444480 D 259536 CDS YP_264489.1 71065762 3514102 1446374..1447351 1 NC_007204.1 lipid A biosynthesis acyltransferase 1447351 3514102 Psyc_1204 Psychrobacter arcticus 273-4 lipid A biosynthesis acyltransferase YP_264489.1 1446374 D 259536 CDS YP_264490.1 71065763 3514103 1447464..1448264 1 NC_007204.1 good rbs; hypothetical protein 1448264 3514103 Psyc_1205 Psychrobacter arcticus 273-4 hypothetical protein YP_264490.1 1447464 D 259536 CDS YP_264491.1 71065764 3514104 1448669..1450234 1 NC_007204.1 glycosyl transferase family protein 1450234 3514104 Psyc_1206 Psychrobacter arcticus 273-4 glycosyl transferase family protein YP_264491.1 1448669 D 259536 CDS YP_264492.1 71065765 3514105 1450235..1451002 1 NC_007204.1 These glycosyl transferases are involved in LPS biosynthesis.; glycosyl transferase family protein 1451002 3514105 Psyc_1207 Psychrobacter arcticus 273-4 glycosyl transferase family protein YP_264492.1 1450235 D 259536 CDS YP_264493.1 71065766 3514106 1451054..1451275 1 NC_007204.1 RBS found.; hypothetical protein 1451275 3514106 Psyc_1208 Psychrobacter arcticus 273-4 hypothetical protein YP_264493.1 1451054 D 259536 CDS YP_264494.1 71065767 3514107 1451660..1452685 1 NC_007204.1 RBS found.; hypothetical protein 1452685 3514107 Psyc_1209 Psychrobacter arcticus 273-4 hypothetical protein YP_264494.1 1451660 D 259536 CDS YP_264495.1 71065768 3514108 complement(1453290..1454408) 1 NC_007204.1 No rbs. Predicted by glimmer and critica.; hypothetical protein 1454408 3514108 Psyc_1210 Psychrobacter arcticus 273-4 hypothetical protein YP_264495.1 1453290 R 259536 CDS YP_264496.1 71065769 3514110 1455014..1456096 1 NC_007204.1 dTDP-glucose 4,6-dehydratase 1456096 rffG 3514110 rffG Psychrobacter arcticus 273-4 dTDP-glucose 4,6-dehydratase YP_264496.1 1455014 D 259536 CDS YP_264497.1 71065770 3514111 1456132..1457037 1 NC_007204.1 dTDP-4-dehydrorhamnose reductase 1457037 rfbD 3514111 rfbD Psychrobacter arcticus 273-4 dTDP-4-dehydrorhamnose reductase YP_264497.1 1456132 D 259536 CDS YP_264498.1 71065771 3514112 1457034..1457924 1 NC_007204.1 glucose-1-phosphate thymidylyltransferase 1457924 rfbA 3514112 rfbA Psychrobacter arcticus 273-4 glucose-1-phosphate thymidylyltransferase YP_264498.1 1457034 D 259536 CDS YP_264499.1 71065772 3515172 1457952..1458524 1 NC_007204.1 dTDP-4-dehydrorhamnose 3,5-epimerase 1458524 rfbC 3515172 rfbC Psychrobacter arcticus 273-4 dTDP-4-dehydrorhamnose 3,5-epimerase YP_264499.1 1457952 D 259536 CDS YP_264500.1 71065773 3515173 complement(1458754..1459683) 1 NC_007204.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1459683 ilvE 3515173 ilvE Psychrobacter arcticus 273-4 branched-chain amino acid aminotransferase YP_264500.1 1458754 R 259536 CDS YP_264501.1 71065774 3515174 complement(1459973..1462822) 1 NC_007204.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1462822 glnE 3515174 glnE Psychrobacter arcticus 273-4 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_264501.1 1459973 R 259536 CDS YP_264502.1 71065775 3515175 1463113..1463544 1 NC_007204.1 DsrE-like protein 1463544 3515175 Psyc_1218 Psychrobacter arcticus 273-4 DsrE-like protein YP_264502.1 1463113 D 259536 CDS YP_264503.1 71065776 3515176 1463650..1463973 1 NC_007204.1 RBS found. This orf occurs between a probable DsrE-like protein and a probable DsrC-like protein.; hypothetical protein 1463973 3515176 Psyc_1219 Psychrobacter arcticus 273-4 hypothetical protein YP_264503.1 1463650 D 259536 CDS YP_264504.1 71065777 3515177 1464072..1464410 1 NC_007204.1 RBS found. Overlaps a probable DsrC-like protein by 4 bp. There is a probable DsrE-like protein two orfs upstream.; hypothetical protein 1464410 3515177 Psyc_1220 Psychrobacter arcticus 273-4 hypothetical protein YP_264504.1 1464072 D 259536 CDS YP_264505.1 71065778 3515178 1464407..1464763 1 NC_007204.1 DsrC-like protein 1464763 3515178 Psyc_1221 Psychrobacter arcticus 273-4 DsrC-like protein YP_264505.1 1464407 D 259536 CDS YP_264506.1 71065779 3515179 complement(1464855..1465415) 1 NC_007204.1 tRNA/rRNA methyltransferase 1465415 spoU 3515179 spoU Psychrobacter arcticus 273-4 tRNA/rRNA methyltransferase YP_264506.1 1464855 R 259536 CDS YP_264507.1 71065780 3515180 1465676..1465816 1 NC_007204.1 similar to E. coli ecnA; entericidin A 1465816 3515180 Psyc_1223 Psychrobacter arcticus 273-4 entericidin A YP_264507.1 1465676 D 259536 CDS YP_264508.1 71065781 3515181 complement(1465912..1467237) 1 NC_007204.1 The amino acid sequence also aligns with a radical SAM catalytic HMM. This supports its probable role in an anaerobic oxidation.; coproporphyrinogen III oxidase, anaerobic 1467237 hemN_rel 3515181 hemN_rel Psychrobacter arcticus 273-4 coproporphyrinogen III oxidase, anaerobic YP_264508.1 1465912 R 259536 CDS YP_264509.1 71065782 3515182 1467794..1469161 1 NC_007204.1 12 probable transmembrane domains.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.884) with cleavage site probability 0.838 at residue 33; multidrug efflux pump, NorM, MATE family 1469161 norM 3515182 norM Psychrobacter arcticus 273-4 multidrug efflux pump, NorM, MATE family YP_264509.1 1467794 D 259536 CDS YP_264510.1 71065783 3515183 1469423..1469851 1 NC_007204.1 biotin carboxyl carrier protein 1469851 accB 3515183 accB Psychrobacter arcticus 273-4 biotin carboxyl carrier protein YP_264510.1 1469423 D 259536 CDS YP_264511.1 71065784 3515184 1470083..1471444 1 NC_007204.1 acetyl-CoA carboxylase, biotin carboxylase 1471444 accC 3515184 accC Psychrobacter arcticus 273-4 acetyl-CoA carboxylase, biotin carboxylase YP_264511.1 1470083 D 259536 CDS YP_264512.1 71065785 3515185 complement(1471585..1472199) 1 NC_007204.1 4 base rbs. Predicted by generation, glimmer and critica.; hypothetical protein 1472199 3515185 Psyc_1228 Psychrobacter arcticus 273-4 hypothetical protein YP_264512.1 1471585 R 259536 CDS YP_264513.1 71065786 3515186 complement(1472613..1474397) 1 NC_007204.1 2-isopropylmalate synthase 1474397 leuA 3515186 leuA Psychrobacter arcticus 273-4 2-isopropylmalate synthase YP_264513.1 1472613 R 259536 CDS YP_264514.1 71065787 3515187 1474615..1475103 1 NC_007204.1 AsnC family transcriptional regulator 1475103 3515187 Psyc_1230 Psychrobacter arcticus 273-4 AsnC family transcriptional regulator YP_264514.1 1474615 D 259536 CDS YP_264515.1 71065788 3515188 complement(1475123..1476409) 1 NC_007204.1 12 transmembrane domains.; major facilitator superfamily transporter 1476409 3515188 Psyc_1231 Psychrobacter arcticus 273-4 major facilitator superfamily transporter YP_264515.1 1475123 R 259536 CDS YP_264516.1 71065789 3515189 complement(1476659..1478014) 1 NC_007204.1 protein kinase 1478014 3515189 Psyc_1232 Psychrobacter arcticus 273-4 protein kinase YP_264516.1 1476659 R 259536 CDS YP_264517.1 71065790 3515190 complement(1478087..1478896) 1 NC_007204.1 MoeZ_MoeB HMM matched in Pfam. ThiF domain is present.; molybdopterin biosynthesis protein 1478896 moeB 3515190 moeB Psychrobacter arcticus 273-4 molybdopterin biosynthesis protein YP_264517.1 1478087 R 259536 CDS YP_264518.1 71065791 3515191 complement(1478906..1479823) 1 NC_007204.1 SAM binding motif, Methylase motif both found by PROSITE; HemK family modification methylase 1479823 3515191 Psyc_1234 Psychrobacter arcticus 273-4 HemK family modification methylase YP_264518.1 1478906 R 259536 CDS YP_264519.1 71065792 3515192 complement(1479871..1481523) 1 NC_007204.1 14 transmembrane domains. Subcellular location: Integral membrane protein. Category is Drug/analog sensitivity; Citation: Microbiology. 1995 May; 141 ( Pt 5): 1085-92 and http://uqbar.rockefeller.edu/regulons/ClustersWadsworth/u_ prommatches84.html; muropeptide MFS uptake transporter AmpG 1481523 ampG 3515192 ampG Psychrobacter arcticus 273-4 muropeptide MFS uptake transporter AmpG YP_264519.1 1479871 R 259536 CDS YP_264520.1 71065793 3515193 1482020..1482949 1 NC_007204.1 possible cbl regulon regulator based on homolgy with BLAST; transcriptional regulator CysB-like protein 1482949 3515193 Psyc_1236 Psychrobacter arcticus 273-4 transcriptional regulator CysB-like protein YP_264520.1 1482020 D 259536 CDS YP_264521.1 71065794 3515194 1483154..1485688 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.663) with cleavage site probability 0.185 at residue 24; quinoprotein glucose dehydrogenase 1485688 3515194 Psyc_1237 Psychrobacter arcticus 273-4 quinoprotein glucose dehydrogenase YP_264521.1 1483154 D 259536 CDS YP_264522.1 71065795 3515195 1485977..1486996 1 NC_007204.1 luciferase 1486996 3515195 Psyc_1238 Psychrobacter arcticus 273-4 luciferase YP_264522.1 1485977 D 259536 CDS YP_264523.1 71065796 3515196 complement(1487124..1488011) 1 NC_007204.1 AEC family transporter 1488011 3515196 Psyc_1239 Psychrobacter arcticus 273-4 AEC family transporter YP_264523.1 1487124 R 259536 CDS YP_264524.1 71065797 3515197 complement(1488420..1490318) 1 NC_007204.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1490318 gidA 3515197 gidA Psychrobacter arcticus 273-4 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_264524.1 1488420 R 259536 CDS YP_264525.1 71065798 3515198 complement(1490582..1491112) 1 NC_007204.1 Predicted by generation, glimmer and critica. 3 base rbs.; hypothetical protein 1491112 3515198 Psyc_1241 Psychrobacter arcticus 273-4 hypothetical protein YP_264525.1 1490582 R 259536 CDS YP_264526.1 71065799 3515199 complement(1491351..1491701) 1 NC_007204.1 glutaredoxin-like protein 1491701 3515199 Psyc_1242 Psychrobacter arcticus 273-4 glutaredoxin-like protein YP_264526.1 1491351 R 259536 CDS YP_264527.1 71065800 3515200 complement(1491851..1492357) 1 NC_007204.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1492357 ispF 3515200 ispF Psychrobacter arcticus 273-4 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_264527.1 1491851 R 259536 CDS YP_264528.1 71065801 3515201 1492614..1493840 1 NC_007204.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1493840 mnmA 3515201 mnmA Psychrobacter arcticus 273-4 tRNA-specific 2-thiouridylase MnmA YP_264528.1 1492614 D 259536 CDS YP_264529.1 71065802 3515202 1493956..1495347 1 NC_007204.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1495347 purB 3515202 purB Psychrobacter arcticus 273-4 adenylosuccinate lyase YP_264529.1 1493956 D 259536 CDS YP_264530.1 71065803 3515203 complement(1495442..1495651) 1 NC_007204.1 Predicted by generation, glimmer. 25 bp cleavage site. 1 transmembrane domain weak rbs; hypothetical protein 1495651 3515203 Psyc_1246 Psychrobacter arcticus 273-4 hypothetical protein YP_264530.1 1495442 R 259536 CDS YP_264531.1 71065804 3515204 1495781..1496953 1 NC_007204.1 hypothetical protein 1496953 3515204 Psyc_1247 Psychrobacter arcticus 273-4 hypothetical protein YP_264531.1 1495781 D 259536 CDS YP_264532.1 71065805 3515205 complement(1497225..1497914) 1 NC_007204.1 RBS found. This orf aligns weakly to the C-terminal end of PutA, and occurs immediately downstream of that gene in Psychrobacter 273-4.; hypothetical protein 1497914 3515205 Psyc_1248 Psychrobacter arcticus 273-4 hypothetical protein YP_264532.1 1497225 R 259536 CDS YP_264533.1 71065806 3515206 complement(1497926..1501168) 1 NC_007204.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1501168 3515206 Psyc_1249 Psychrobacter arcticus 273-4 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_264533.1 1497926 R 259536 CDS YP_264534.1 71065807 3515207 1501890..1502621 1 NC_007204.1 TolQ proton channel 1502621 3515207 Psyc_1250 Psychrobacter arcticus 273-4 TolQ proton channel YP_264534.1 1501890 D 259536 CDS YP_264535.1 71065808 3515208 1502618..1503076 1 NC_007204.1 4 bp overlap with a TolQ-like ORF; biopolymer transport protein TolR 1503076 tolR 3515208 tolR Psychrobacter arcticus 273-4 biopolymer transport protein TolR YP_264535.1 1502618 D 259536 CDS YP_264536.1 71065809 3515209 1503201..1504208 1 NC_007204.1 RBS found. Weak alignment (above trusted cutoff) to TIGR TonB C-terminal subfamily HMM. Serine rich region identified N-terminal to this. Contains 1 predicted transmembrane domain.; hypothetical protein 1504208 3515209 Psyc_1252 Psychrobacter arcticus 273-4 hypothetical protein YP_264536.1 1503201 D 259536 CDS YP_264537.1 71065810 3515210 1504345..1505637 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 1.000 at residue 27; TolB periplasmic receptor 1505637 tolB 3515210 tolB Psychrobacter arcticus 273-4 TolB periplasmic receptor YP_264537.1 1504345 D 259536 CDS YP_264538.1 71065811 3515211 complement(1506372..1506974) 1 NC_007204.1 TRP repressor binding protein 1506974 3515211 Psyc_1254 Psychrobacter arcticus 273-4 TRP repressor binding protein YP_264538.1 1506372 R 259536 CDS YP_264539.1 71065812 3515212 1507444..1508700 1 NC_007204.1 TolB periplamsic protein 1508700 yeeE 3515212 yeeE Psychrobacter arcticus 273-4 TolB periplamsic protein YP_264539.1 1507444 D 259536 CDS YP_264540.1 71065813 3515213 complement(1509113..1510048) 1 NC_007204.1 RBS found. Aligns to TIGR hypothetical equivalog for DUF152 proteins.; hypothetical protein 1510048 3515213 Psyc_1256 Psychrobacter arcticus 273-4 hypothetical protein YP_264540.1 1509113 R 259536 CDS YP_264541.1 71065814 3515214 complement(1510078..1511280) 1 NC_007204.1 In E. coli, RluD (SfhB) modifies uridine to pseudouridine at 23S RNA U1911, 1915, and 1917, RluC modifies 955, 2504 and 2580, and RluA modifies U746 and tRNA U32. An additional homolog from E. coli, YqcB (EGAD|35358|EC2791), is uncharacterized.; ribosomal large subunit pseudouridine synthase D 1511280 rluD 3515214 rluD Psychrobacter arcticus 273-4 ribosomal large subunit pseudouridine synthase D YP_264541.1 1510078 R 259536 CDS YP_264542.1 71065815 3515215 1512103..1513182 1 NC_007204.1 lipoprotein 1513182 3515215 Psyc_1258 Psychrobacter arcticus 273-4 lipoprotein YP_264542.1 1512103 D 259536 CDS YP_264543.1 71065816 3515216 1513396..1515558 1 NC_007204.1 DNA primase 1515558 dnaG 3515216 dnaG Psychrobacter arcticus 273-4 DNA primase YP_264543.1 1513396 D 259536 CDS YP_264544.1 71065817 3515217 1516085..1518028 1 NC_007204.1 contains the 4 conserved regions of rpoD also nonessential domains associated with other rpoD; sigma-70 factor (RpoD) 1518028 rpoD 3515217 rpoD Psychrobacter arcticus 273-4 sigma-70 factor (RpoD) YP_264544.1 1516085 D 259536 CDS YP_264545.1 71065818 3515218 1518409..1519335 1 NC_007204.1 Protein of unknown function UPF0187 domain; hypothetical protein 1519335 3515218 Psyc_1261 Psychrobacter arcticus 273-4 hypothetical protein YP_264545.1 1518409 D 259536 CDS YP_264546.1 71065819 3515219 1519603..1519995 1 NC_007204.1 hypothetical protein 1519995 3515219 Psyc_1262 Psychrobacter arcticus 273-4 hypothetical protein YP_264546.1 1519603 D 259536 CDS YP_264547.1 71065820 3515220 1520712..1522988 1 NC_007204.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1522988 nrdA 3515220 nrdA Psychrobacter arcticus 273-4 ribonucleotide-diphosphate reductase subunit alpha YP_264547.1 1520712 D 259536 CDS YP_264548.1 71065821 3515221 1523098..1523886 1 NC_007204.1 1 transmembrane region ,has weak rbs so may be a protein despite only glimmer prediction; hypothetical protein 1523886 3515221 Psyc_1264 Psychrobacter arcticus 273-4 hypothetical protein YP_264548.1 1523098 D 259536 CDS YP_264549.1 71065822 3515222 1524362..1524613 1 NC_007204.1 Overlaps a StbE like ORF.; StbD-like prevent host death protein 1524613 3515222 Psyc_1265 Psychrobacter arcticus 273-4 StbD-like prevent host death protein YP_264549.1 1524362 D 259536 CDS YP_264550.1 71065823 3515223 1524603..1524890 1 NC_007204.1 hypothetical protein 1524890 3515223 Psyc_1266 Psychrobacter arcticus 273-4 hypothetical protein YP_264550.1 1524603 D 259536 CDS YP_264551.1 71065824 3515224 1524958..1525323 1 NC_007204.1 RBS found.; hypothetical protein 1525323 3515224 Psyc_1267 Psychrobacter arcticus 273-4 hypothetical protein YP_264551.1 1524958 D 259536 CDS YP_264552.1 71065825 3515225 1525414..1526547 1 NC_007204.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 1526547 nrdB 3515225 nrdB Psychrobacter arcticus 273-4 ribonucleotide-diphosphate reductase subunit beta YP_264552.1 1525414 D 259536 CDS YP_264553.1 71065826 3515226 1526770..1527030 1 NC_007204.1 ferrodoxin 1527030 3515226 Psyc_1269 Psychrobacter arcticus 273-4 ferrodoxin YP_264553.1 1526770 D 259536 CDS YP_264554.1 71065827 3515227 complement(1527217..1528545) 1 NC_007204.1 serine protease 1528545 algW 3515227 algW Psychrobacter arcticus 273-4 serine protease YP_264554.1 1527217 R 259536 CDS YP_264555.1 71065828 3515228 1528949..1529785 1 NC_007204.1 (DUF34) protein domain; hypothetical protein 1529785 3515228 Psyc_1271 Psychrobacter arcticus 273-4 hypothetical protein YP_264555.1 1528949 D 259536 CDS YP_264556.1 71065829 3515229 1530723..1531931 1 NC_007204.1 lytic transglycosylase 1531931 3515229 Psyc_1272 Psychrobacter arcticus 273-4 lytic transglycosylase YP_264556.1 1530723 D 259536 CDS YP_264557.1 71065830 3515230 complement(1532054..1535059) 1 NC_007204.1 One Transglycosylase domain and 7 LysM lysin domains.; membrane-bound lytic murein transglycosylase D 1535059 3515230 Psyc_1273 Psychrobacter arcticus 273-4 membrane-bound lytic murein transglycosylase D YP_264557.1 1532054 R 259536 CDS YP_264558.1 71065831 3515231 complement(1535240..1535734) 1 NC_007204.1 Predicted by generation, glimmer and critica. 3 base rbs. 1 transmembrane domain, 36 bp cleavage site; hypothetical protein 1535734 3515231 Psyc_1274 Psychrobacter arcticus 273-4 hypothetical protein YP_264558.1 1535240 R 259536 CDS YP_264559.1 71065832 3515232 complement(1536166..1537587) 1 NC_007204.1 Possible transmembrane protein with CBS domains; hypothetical protein 1537587 3515232 Psyc_1275 Psychrobacter arcticus 273-4 hypothetical protein YP_264559.1 1536166 R 259536 CDS YP_264560.1 71065833 3515233 1537959..1538285 1 NC_007204.1 protein translocase subunit yajC 1538285 yajC 3515233 yajC Psychrobacter arcticus 273-4 protein translocase subunit yajC YP_264560.1 1537959 D 259536 CDS YP_264561.1 71065834 3515234 1538715..1540592 1 NC_007204.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1540592 secD 3515234 secD Psychrobacter arcticus 273-4 preprotein translocase subunit SecD YP_264561.1 1538715 D 259536 CDS YP_264562.1 71065835 3515235 1540602..1541846 1 NC_007204.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1541846 secF 3515235 secF Psychrobacter arcticus 273-4 preprotein translocase subunit SecF YP_264562.1 1540602 D 259536 CDS YP_264563.1 71065836 3515236 1542058..1543476 1 NC_007204.1 DNA-damage-inducible protein F 1543476 dinF 3515236 dinF Psychrobacter arcticus 273-4 DNA-damage-inducible protein F YP_264563.1 1542058 D 259536 CDS YP_264564.1 71065837 3515237 1543571..1544302 1 NC_007204.1 branched chain amino acid efflux pump, LivE family, large subunit 1544302 3515237 Psyc_1280 Psychrobacter arcticus 273-4 branched chain amino acid efflux pump, LivE family, large subunit YP_264564.1 1543571 D 259536 CDS YP_264565.1 71065838 3515238 1544292..1544651 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.958) with cleavage site probability 0.952 at residue 23; hypothetical protein 1544651 3515238 Psyc_1281 Psychrobacter arcticus 273-4 hypothetical protein YP_264565.1 1544292 D 259536 CDS YP_264566.1 71065839 3515239 complement(1544760..1546295) 1 NC_007204.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1546295 purF 3515239 purF Psychrobacter arcticus 273-4 amidophosphoribosyltransferase YP_264566.1 1544760 R 259536 CDS YP_264567.1 71065840 3515240 complement(1546537..1547034) 1 NC_007204.1 colicin V production protein 1547034 cvpA 3515240 cvpA Psychrobacter arcticus 273-4 colicin V production protein YP_264567.1 1546537 R 259536 CDS YP_264568.1 71065841 3515241 complement(1547131..1548165) 1 NC_007204.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1548165 pyrD 3515241 pyrD Psychrobacter arcticus 273-4 dihydroorotate dehydrogenase 2 YP_264568.1 1547131 R 259536 CDS YP_264569.1 71065842 3515242 complement(1548495..1548953) 1 NC_007204.1 phospho-histidine phosphatase 1548953 3515242 Psyc_1285 Psychrobacter arcticus 273-4 phospho-histidine phosphatase YP_264569.1 1548495 R 259536 CDS YP_264570.2 161611072 3515243 complement(1549143..1550261) 1 NC_007204.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1550261 gpsA 3515243 gpsA Psychrobacter arcticus 273-4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_264570.2 1549143 R 259536 CDS YP_264571.1 71065844 3515244 complement(1550774..1551433) 1 NC_007204.1 aldehyde dehydrogenase 1551433 3515244 Psyc_1287 Psychrobacter arcticus 273-4 aldehyde dehydrogenase YP_264571.1 1550774 R 259536 CDS YP_264572.1 71065845 3515245 complement(1551499..1552620) 1 NC_007204.1 AFG1-like ATPase 1552620 3515245 Psyc_1288 Psychrobacter arcticus 273-4 AFG1-like ATPase YP_264572.1 1551499 R 259536 CDS YP_264573.1 71065846 3515246 complement(1552994..1553653) 1 NC_007204.1 hypothetical protein 1553653 3515246 Psyc_1289 Psychrobacter arcticus 273-4 hypothetical protein YP_264573.1 1552994 R 259536 CDS YP_264574.1 71065847 3515247 1554069..1554437 1 NC_007204.1 RBS found. SignalP detects a signal peptidase target site.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.851 at residue 23; hypothetical protein 1554437 3515247 Psyc_1290 Psychrobacter arcticus 273-4 hypothetical protein YP_264574.1 1554069 D 259536 CDS YP_264575.1 71065848 3515248 1554649..1556199 1 NC_007204.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1556199 xseA 3515248 xseA Psychrobacter arcticus 273-4 exodeoxyribonuclease VII large subunit YP_264575.1 1554649 D 259536 CDS YP_264576.1 71065849 3515249 1556388..1556633 1 NC_007204.1 RBS found; hypothetical protein 1556633 3515249 Psyc_1292 Psychrobacter arcticus 273-4 hypothetical protein YP_264576.1 1556388 D 259536 CDS YP_264577.1 71065850 3515250 complement(1556643..1557884) 1 NC_007204.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1557884 pncB 3515250 pncB Psychrobacter arcticus 273-4 nicotinate phosphoribosyltransferase YP_264577.1 1556643 R 259536 CDS YP_264578.1 71065851 3515251 complement(1558422..1559957) 1 NC_007204.1 aldehyde dehydrogenase 1559957 3515251 Psyc_1294 Psychrobacter arcticus 273-4 aldehyde dehydrogenase YP_264578.1 1558422 R 259536 CDS YP_264579.1 71065852 3515252 1560481..1561341 1 NC_007204.1 protein ligase 1561341 lipB 3515252 lipB Psychrobacter arcticus 273-4 protein ligase YP_264579.1 1560481 D 259536 CDS YP_264580.1 71065853 3515253 1561538..1562068 1 NC_007204.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 1562068 ppa 3515253 ppa Psychrobacter arcticus 273-4 inorganic pyrophosphatase YP_264580.1 1561538 D 259536 CDS YP_264581.1 71065854 3515254 1562205..1562669 1 NC_007204.1 RBS found. Contains one predicted transmembrane domain.; hypothetical protein 1562669 3515254 Psyc_1297 Psychrobacter arcticus 273-4 hypothetical protein YP_264581.1 1562205 D 259536 CDS YP_264582.1 71065855 3515255 1562781..1563176 1 NC_007204.1 RBS found; hypothetical protein 1563176 3515255 Psyc_1298 Psychrobacter arcticus 273-4 hypothetical protein YP_264582.1 1562781 D 259536 CDS YP_264583.1 71065856 3515256 complement(1564044..1564931) 1 NC_007204.1 fatty acyl-CoA reductase 1564931 3515256 Psyc_1299 Psychrobacter arcticus 273-4 fatty acyl-CoA reductase YP_264583.1 1564044 R 259536 CDS YP_264584.1 71065857 3515257 complement(1565152..1566183) 1 NC_007204.1 nifR3 is thought to be a regulatory protein, rather than a catalytic protein, however, the two families (Dihydrouridylate synthase, and nifR3) may constitute a larger family with conserved cysteine residues.; NifR3 family TIM-barrel protein 1566183 3515257 Psyc_1300 Psychrobacter arcticus 273-4 NifR3 family TIM-barrel protein YP_264584.1 1565152 R 259536 CDS YP_264585.1 71065858 3515258 complement(1566327..1568375) 1 NC_007204.1 BCCT family betaine/choline/carnitine/glycine transporter 1568375 3515258 Psyc_1301 Psychrobacter arcticus 273-4 BCCT family betaine/choline/carnitine/glycine transporter YP_264585.1 1566327 R 259536 CDS YP_264586.1 71065859 3515259 complement(1568597..1569037) 1 NC_007204.1 histidine triad (HIT) protein 1569037 3515259 Psyc_1302 Psychrobacter arcticus 273-4 histidine triad (HIT) protein YP_264586.1 1568597 R 259536 CDS YP_264587.1 71065860 3515260 1569234..1570049 1 NC_007204.1 RBS found.; hypothetical protein 1570049 3515260 Psyc_1303 Psychrobacter arcticus 273-4 hypothetical protein YP_264587.1 1569234 D 259536 CDS YP_264588.1 71065861 3515261 1570230..1572116 1 NC_007204.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1572116 ilvD 3515261 ilvD Psychrobacter arcticus 273-4 dihydroxy-acid dehydratase YP_264588.1 1570230 D 259536 CDS YP_264589.1 71065862 3515262 1572464..1573711 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.726) with cleavage site probability 0.687 at residue 20; CPA1 family Na(+)/H(+) antiporter 1573711 3515262 Psyc_1305 Psychrobacter arcticus 273-4 CPA1 family Na(+)/H(+) antiporter YP_264589.1 1572464 D 259536 CDS YP_264590.1 71065863 3515263 complement(1573908..1575380) 1 NC_007204.1 beta-lactamase 1575380 3515263 Psyc_1306 Psychrobacter arcticus 273-4 beta-lactamase YP_264590.1 1573908 R 259536 CDS YP_264591.1 71065864 3515264 complement(1575490..1576110) 1 NC_007204.1 hypothetical protein 1576110 3515264 Psyc_1307 Psychrobacter arcticus 273-4 hypothetical protein YP_264591.1 1575490 R 259536 CDS YP_264592.1 71065865 3515265 complement(1576097..1577014) 1 NC_007204.1 RBS found; hypothetical protein 1577014 3515265 Psyc_1308 Psychrobacter arcticus 273-4 hypothetical protein YP_264592.1 1576097 R 259536 CDS YP_264593.1 71065866 3515266 complement(1577205..1578605) 1 NC_007204.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1578605 fabG 3515266 fabG Psychrobacter arcticus 273-4 3-ketoacyl-ACP reductase YP_264593.1 1577205 R 259536 CDS YP_264594.1 71065867 3515267 1579271..1580851 1 NC_007204.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1580851 3515267 Psyc_1310 Psychrobacter arcticus 273-4 acetyl-CoA acetyltransferase YP_264594.1 1579271 D 259536 CDS YP_264595.1 71065868 3515268 1581007..1582086 1 NC_007204.1 domain hit to Protein of unknown function DUF344; hypothetical protein 1582086 3515268 Psyc_1311 Psychrobacter arcticus 273-4 hypothetical protein YP_264595.1 1581007 D 259536 CDS YP_264596.1 71065869 3515269 complement(1582271..1582618) 1 NC_007204.1 type IV fimbriae assembly protein 1582618 pilZ 3515269 pilZ Psychrobacter arcticus 273-4 type IV fimbriae assembly protein YP_264596.1 1582271 R 259536 CDS YP_264597.1 71065870 3515270 complement(1582757..1583857) 1 NC_007204.1 Citation: Song MS, Pham PT, Olson M, Carter JR, Franden MA, Schaaper RM, McHenry CS. 2001. The delta and delta ' subunits of the DNA polymerase III holoenzyme are essential for initiation complex formation and processive elongation. J Biol Chem. 276:35165-35175.; DNA polymerase III, delta prime subunit 1583857 holB 3515270 holB Psychrobacter arcticus 273-4 DNA polymerase III, delta prime subunit YP_264597.1 1582757 R 259536 CDS YP_264598.1 71065871 3515271 complement(1584020..1584826) 1 NC_007204.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1584826 kdsB 3515271 kdsB Psychrobacter arcticus 273-4 3-deoxy-manno-octulosonate cytidylyltransferase YP_264598.1 1584020 R 259536 CDS YP_264599.1 71065872 3515272 complement(1584870..1586027) 1 NC_007204.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 1586027 lpxK 3515272 lpxK Psychrobacter arcticus 273-4 tetraacyldisaccharide 4'-kinase YP_264599.1 1584870 R 259536 CDS YP_264600.1 71065873 3515273 complement(1586037..1587824) 1 NC_007204.1 lipid/multidrug ABC transporter MsbA ATPase and inner membrane domains 1587824 msbA 3515273 msbA Psychrobacter arcticus 273-4 lipid/multidrug ABC transporter MsbA ATPase and inner membrane domains YP_264600.1 1586037 R 259536 CDS YP_264601.1 71065874 3515274 complement(1587960..1588391) 1 NC_007204.1 biopolymer transport protein ExbD/TolR 1588391 3515274 Psyc_1317 Psychrobacter arcticus 273-4 biopolymer transport protein ExbD/TolR YP_264601.1 1587960 R 259536 CDS YP_264602.1 71065875 3515275 complement(1588570..1589214) 1 NC_007204.1 MotA/TolQ/ExbB proton channel 1589214 3515275 Psyc_1318 Psychrobacter arcticus 273-4 MotA/TolQ/ExbB proton channel YP_264602.1 1588570 R 259536 CDS YP_264603.1 71065876 3515276 complement(1589303..1590430) 1 NC_007204.1 This group of chromosomal and plasmid partition proteins are related to ParB, including Spo0J, RepB, and SopB.; chromosome segregation DNA-binding protein 1590430 parB 3515276 parB Psychrobacter arcticus 273-4 chromosome segregation DNA-binding protein YP_264603.1 1589303 R 259536 CDS YP_264604.1 71065877 3515277 complement(1590578..1591357) 1 NC_007204.1 chromosome segregation ATPase 1591357 3515277 Psyc_1320 Psychrobacter arcticus 273-4 chromosome segregation ATPase YP_264604.1 1590578 R 259536 CDS YP_264605.1 71065878 3515278 complement(1591491..1592207) 1 NC_007204.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 1592207 gidB 3515278 gidB Psychrobacter arcticus 273-4 16S rRNA methyltransferase GidB YP_264605.1 1591491 R 259536 CDS YP_264606.1 71065879 3515279 1592572..1595427 1 NC_007204.1 hypothetical protein 1595427 3515279 Psyc_1322 Psychrobacter arcticus 273-4 hypothetical protein YP_264606.1 1592572 D 259536 CDS YP_264607.1 71065880 3515280 1595533..1596684 1 NC_007204.1 This is a long protein and hits to transcriptinal factors are only in middle also no helix turn helix domains which would signify nucleic acid binding; hypothetical protein 1596684 3515280 Psyc_1323 Psychrobacter arcticus 273-4 hypothetical protein YP_264607.1 1595533 D 259536 CDS YP_264608.1 71065881 3515281 1596754..1597422 1 NC_007204.1 hypothetical protein 1597422 3515281 Psyc_1324 Psychrobacter arcticus 273-4 hypothetical protein YP_264608.1 1596754 D 259536 CDS YP_264609.1 71065882 3515282 complement(1597688..1598665) 1 NC_007204.1 VIC family potassium channel protein 1598665 3515282 Psyc_1325 Psychrobacter arcticus 273-4 VIC family potassium channel protein YP_264609.1 1597688 R 259536 CDS YP_264610.1 71065883 3515283 1599243..1599872 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 at residue 22; OmpW family outer membrane protein 1599872 ompW 3515283 ompW Psychrobacter arcticus 273-4 OmpW family outer membrane protein YP_264610.1 1599243 D 259536 CDS YP_264611.1 71065884 3515284 complement(1600173..1601909) 1 NC_007204.1 dihydrolipoyllysine acetyltransferase component of pyruvate dehydrogenase complex 1601909 aceF 3515284 aceF Psychrobacter arcticus 273-4 dihydrolipoyllysine acetyltransferase component of pyruvate dehydrogenase complex YP_264611.1 1600173 R 259536 CDS YP_264612.1 71065885 3515285 complement(1601935..1604748) 1 NC_007204.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 1604748 aceE 3515285 aceE Psychrobacter arcticus 273-4 pyruvate dehydrogenase subunit E1 YP_264612.1 1601935 R 259536 CDS YP_264613.1 71065886 3515286 complement(1605538..1606278) 1 NC_007204.1 not enough evidence to determine sub family membership; TetR family transcriptional regulator 1606278 3515286 Psyc_1329 Psychrobacter arcticus 273-4 TetR family transcriptional regulator YP_264613.1 1605538 R 259536 CDS YP_264614.1 71065887 3515287 complement(1606444..1607469) 1 NC_007204.1 hypothetical protein 1607469 3515287 Psyc_1330 Psychrobacter arcticus 273-4 hypothetical protein YP_264614.1 1606444 R 259536 CDS YP_264615.1 71065888 3515288 complement(1607955..1608632) 1 NC_007204.1 RBS found.; hypothetical protein 1608632 3515288 Psyc_1331 Psychrobacter arcticus 273-4 hypothetical protein YP_264615.1 1607955 R 259536 CDS YP_264616.1 71065889 3515289 complement(1608917..1610533) 1 NC_007204.1 glycerol kinase 1610533 3515289 Psyc_1332 Psychrobacter arcticus 273-4 glycerol kinase YP_264616.1 1608917 R 259536 CDS YP_264617.1 71065890 3515290 complement(1611045..1612688) 1 NC_007204.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 1612688 sthA 3515290 sthA Psychrobacter arcticus 273-4 soluble pyridine nucleotide transhydrogenase YP_264617.1 1611045 R 259536 CDS YP_264618.1 71065891 3515291 complement(1612885..1613781) 1 NC_007204.1 RBS found. Aligns to DUF299 domain of unknown function HMM.; hypothetical protein 1613781 3515291 Psyc_1334 Psychrobacter arcticus 273-4 hypothetical protein YP_264618.1 1612885 R 259536 CDS YP_264619.1 71065892 3515292 1614150..1616534 1 NC_007204.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1616534 ppsA 3515292 ppsA Psychrobacter arcticus 273-4 phosphoenolpyruvate synthase YP_264619.1 1614150 D 259536 CDS YP_264620.1 71065893 3515293 1616706..1617689 1 NC_007204.1 contains 3 predicted transmembrane domains; hypothetical protein 1617689 3515293 Psyc_1336 Psychrobacter arcticus 273-4 hypothetical protein YP_264620.1 1616706 D 259536 CDS YP_264621.1 71065894 3515294 1617980..1618378 1 NC_007204.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1618378 rpsF 3515294 rpsF Psychrobacter arcticus 273-4 30S ribosomal protein S6 YP_264621.1 1617980 D 259536 CDS YP_264622.1 71065895 3515295 1618395..1618625 1 NC_007204.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1618625 rpsR 3515295 rpsR Psychrobacter arcticus 273-4 30S ribosomal protein S18 YP_264622.1 1618395 D 259536 CDS YP_264623.1 71065896 3515296 1618646..1619146 1 NC_007204.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1619146 rplI 3515296 rplI Psychrobacter arcticus 273-4 50S ribosomal protein L9 YP_264623.1 1618646 D 259536 CDS YP_264624.1 71065897 3515297 1619295..1619537 1 NC_007204.1 RBS found.; hypothetical protein 1619537 3515297 Psyc_1340 Psychrobacter arcticus 273-4 hypothetical protein YP_264624.1 1619295 D 259536 CDS YP_264625.1 71065898 3515299 1620372..1621508 1 NC_007204.1 glycerate kinase 1621508 3515299 Psyc_1342 Psychrobacter arcticus 273-4 glycerate kinase YP_264625.1 1620372 D 259536 CDS YP_264626.1 71065899 3515301 complement(1621982..1622404) 1 NC_007204.1 RBS found; hypothetical protein 1622404 3515301 Psyc_1344 Psychrobacter arcticus 273-4 hypothetical protein YP_264626.1 1621982 R 259536 CDS YP_264627.1 71065900 3515302 complement(1622551..1622889) 1 NC_007204.1 endoribonuclease 1622889 3515302 Psyc_1345 Psychrobacter arcticus 273-4 endoribonuclease YP_264627.1 1622551 R 259536 CDS YP_264628.1 71065901 3515303 complement(1622932..1624179) 1 NC_007204.1 Substrate unknown. Aligns to DAO family HMM and DAO COG.; D-amino acid oxidase 1624179 3515303 Psyc_1346 Psychrobacter arcticus 273-4 D-amino acid oxidase YP_264628.1 1622932 R 259536 CDS YP_264629.1 71065902 3515304 complement(1624474..1624938) 1 NC_007204.1 rep helicase, single-stranded DNA-dependent ATPase protein 1624938 3515304 Psyc_1347 Psychrobacter arcticus 273-4 rep helicase, single-stranded DNA-dependent ATPase protein YP_264629.1 1624474 R 259536 CDS YP_264630.1 71065903 3515305 complement(1625133..1626386) 1 NC_007204.1 12 predicted transmembrane helices; hypothetical protein 1626386 3515305 Psyc_1348 Psychrobacter arcticus 273-4 hypothetical protein YP_264630.1 1625133 R 259536 CDS YP_264631.1 71065904 3515306 1626571..1626810 1 NC_007204.1 RBS found; hypothetical protein 1626810 3515306 Psyc_1349 Psychrobacter arcticus 273-4 hypothetical protein YP_264631.1 1626571 D 259536 CDS YP_264632.1 71065905 3515307 complement(1626894..1628384) 1 NC_007204.1 aldehyde dehydrogenase 1628384 3515307 Psyc_1350 Psychrobacter arcticus 273-4 aldehyde dehydrogenase YP_264632.1 1626894 R 259536 CDS YP_264633.1 71065906 3515308 1628662..1629300 1 NC_007204.1 TetR family transcriptional regulator 1629300 3515308 Psyc_1351 Psychrobacter arcticus 273-4 TetR family transcriptional regulator YP_264633.1 1628662 D 259536 CDS YP_264634.1 71065907 3515309 1629640..1630872 1 NC_007204.1 iron-containing alcohol dehydrogenase 1630872 3515309 Psyc_1352 Psychrobacter arcticus 273-4 iron-containing alcohol dehydrogenase YP_264634.1 1629640 D 259536 CDS YP_264635.1 71065908 3515310 1630971..1631648 1 NC_007204.1 ThiJ/PfpI family protein 1631648 nonF 3515310 nonF Psychrobacter arcticus 273-4 ThiJ/PfpI family protein YP_264635.1 1630971 D 259536 CDS YP_264636.1 71065909 3515311 1631785..1631988 1 NC_007204.1 No RBS found.; hypothetical protein 1631988 3515311 Psyc_1354 Psychrobacter arcticus 273-4 hypothetical protein YP_264636.1 1631785 D 259536 CDS YP_264637.1 71065910 3515312 complement(1632150..1632401) 1 NC_007204.1 Predicted by generation, glimmer and critica.; hypothetical protein 1632401 3515312 Psyc_1355 Psychrobacter arcticus 273-4 hypothetical protein YP_264637.1 1632150 R 259536 CDS YP_264638.1 71065911 3515313 1632604..1634220 1 NC_007204.1 MFS drug efflux transporter RmrB 1634220 3515313 Psyc_1356 Psychrobacter arcticus 273-4 MFS drug efflux transporter RmrB YP_264638.1 1632604 D 259536 CDS YP_264639.1 71065912 3515314 1634322..1635725 1 NC_007204.1 multidrug efflux pump (emrA) 1635725 3515314 Psyc_1357 Psychrobacter arcticus 273-4 multidrug efflux pump (emrA) YP_264639.1 1634322 D 259536 CDS YP_264640.1 71065913 3515315 complement(1635916..1636566) 1 NC_007204.1 pyridoxamine 5'-phosphate oxidase 1636566 pdxH 3515315 pdxH Psychrobacter arcticus 273-4 pyridoxamine 5'-phosphate oxidase YP_264640.1 1635916 R 259536 CDS YP_264641.1 71065914 3515316 complement(1636605..1637972) 1 NC_007204.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1637972 glmM 3515316 glmM Psychrobacter arcticus 273-4 phosphoglucosamine mutase YP_264641.1 1636605 R 259536 CDS YP_264642.1 71065915 3515317 complement(1638223..1639695) 1 NC_007204.1 Two CBS domains are found in this ORF.; inosine-5'-monophosphate dehydrogenase 1639695 guaB 3515317 guaB Psychrobacter arcticus 273-4 inosine-5'-monophosphate dehydrogenase YP_264642.1 1638223 R 259536 CDS YP_264643.1 71065916 3515318 complement(1640108..1641574) 1 NC_007204.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1641574 cysS 3515318 cysS Psychrobacter arcticus 273-4 cysteinyl-tRNA synthetase YP_264643.1 1640108 R 259536 CDS YP_264644.1 71065917 3515319 1641936..1642580 1 NC_007204.1 ATP:cob(I)alamin adenosyltransferase 1642580 btuR 3515319 btuR Psychrobacter arcticus 273-4 ATP:cob(I)alamin adenosyltransferase YP_264644.1 1641936 D 259536 CDS YP_264645.1 71065918 3515320 complement(1642683..1643576) 1 NC_007204.1 not a membrane binding inner protein despite the domain presence because these proteins contain transmembrane helices to either side of domain; hypothetical protein 1643576 3515320 Psyc_1363 Psychrobacter arcticus 273-4 hypothetical protein YP_264645.1 1642683 R 259536 CDS YP_264646.1 71065919 3515321 1643973..1644701 1 NC_007204.1 glycerophosphoryl diester phosphodiesterase 1644701 3515321 Psyc_1364 Psychrobacter arcticus 273-4 glycerophosphoryl diester phosphodiesterase YP_264646.1 1643973 D 259536 CDS YP_264647.1 71065920 3515322 1644926..1646329 1 NC_007204.1 Delta-9 acyl-phospholipid desaturase 1646329 3515322 Psyc_1365 Psychrobacter arcticus 273-4 Delta-9 acyl-phospholipid desaturase YP_264647.1 1644926 D 259536 CDS YP_264648.1 71065921 3515323 1646735..1648207 1 NC_007204.1 hypothetical protein 1648207 3515323 Psyc_1366 Psychrobacter arcticus 273-4 hypothetical protein YP_264648.1 1646735 D 259536 CDS YP_264649.1 71065922 3515324 1648650..1650989 1 NC_007204.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 1650989 maeB 3515324 maeB Psychrobacter arcticus 273-4 malic enzyme YP_264649.1 1648650 D 259536 CDS YP_264650.1 71065923 3515325 1651145..1652332 1 NC_007204.1 tRNA nucleotidyltransferase 1652332 cca 3515325 cca Psychrobacter arcticus 273-4 tRNA nucleotidyltransferase YP_264650.1 1651145 D 259536 CDS YP_264651.1 71065924 3515326 1652394..1653197 1 NC_007204.1 Involved in pteridine salvage and antifolate resistance; pteridine reductase 1653197 3515326 Psyc_1369 Psychrobacter arcticus 273-4 pteridine reductase YP_264651.1 1652394 D 259536 CDS YP_264652.1 71065925 3515328 1653540..1654811 1 NC_007204.1 Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment.; phage integrase 1654811 3515328 Psyc_1370 Psychrobacter arcticus 273-4 phage integrase YP_264652.1 1653540 D 259536 CDS YP_264653.1 71065926 3515329 complement(1655016..1655477) 1 NC_007204.1 RBS found.; hypothetical protein 1655477 3515329 Psyc_1371 Psychrobacter arcticus 273-4 hypothetical protein YP_264653.1 1655016 R 259536 CDS YP_264654.1 71065927 3515330 complement(1655467..1657236) 1 NC_007204.1 RBS found. Aligns to ThiF family domain.; hypothetical protein 1657236 3515330 Psyc_1372 Psychrobacter arcticus 273-4 hypothetical protein YP_264654.1 1655467 R 259536 CDS YP_264655.1 71065928 3515331 complement(1657236..1658540) 1 NC_007204.1 hypothetical protein 1658540 3515331 Psyc_1373 Psychrobacter arcticus 273-4 hypothetical protein YP_264655.1 1657236 R 259536 CDS YP_264656.1 71065929 3515332 complement(1658537..1659637) 1 NC_007204.1 Patatin is a phospholipase.; patatin-related protein 1659637 3515332 Psyc_1374 Psychrobacter arcticus 273-4 patatin-related protein YP_264656.1 1658537 R 259536 CDS YP_264657.1 71065930 3515333 complement(1659795..1660544) 1 NC_007204.1 transposase, ISSod6 1660544 3515333 Psyc_1375 Psychrobacter arcticus 273-4 transposase, ISSod6 YP_264657.1 1659795 R 259536 CDS YP_264658.1 71065931 3515334 complement(1660634..1662676) 1 NC_007204.1 RBS found.; hypothetical protein 1662676 3515334 Psyc_1376 Psychrobacter arcticus 273-4 hypothetical protein YP_264658.1 1660634 R 259536 CDS YP_264659.1 71065932 3515335 complement(1662694..1664190) 1 NC_007204.1 DUF262 domain; hypothetical protein 1664190 3515335 Psyc_1377 Psychrobacter arcticus 273-4 hypothetical protein YP_264659.1 1662694 R 259536 CDS YP_264660.1 71065933 3515336 complement(1664331..1664957) 1 NC_007204.1 Predicted by generation, glimmer and critica. strong rbs; hypothetical protein 1664957 3515336 Psyc_1378 Psychrobacter arcticus 273-4 hypothetical protein YP_264660.1 1664331 R 259536 CDS YP_264661.1 71065934 3515337 complement(1665053..1665493) 1 NC_007204.1 RBS found. Aligns to COG5579: Uncharacterized conserved protein.; hypothetical protein 1665493 3515337 Psyc_1379 Psychrobacter arcticus 273-4 hypothetical protein YP_264661.1 1665053 R 259536 CDS YP_264662.1 71065935 3515338 complement(1665583..1666260) 1 NC_007204.1 Predicted by generation, glimmer and critica. strong rbs; hypothetical protein 1666260 3515338 Psyc_1380 Psychrobacter arcticus 273-4 hypothetical protein YP_264662.1 1665583 R 259536 CDS YP_264663.1 71065936 3515339 complement(1666288..1667379) 1 NC_007204.1 contains p-loop ATP binding domain; transcription factor 1667379 3515339 Psyc_1381 Psychrobacter arcticus 273-4 transcription factor YP_264663.1 1666288 R 259536 CDS YP_264664.1 71065937 3515340 complement(1667432..1668289) 1 NC_007204.1 serine/threonine phosphatase 1668289 3515340 Psyc_1382 Psychrobacter arcticus 273-4 serine/threonine phosphatase YP_264664.1 1667432 R 259536 CDS YP_264665.1 71065938 3515341 1668805..1672740 1 NC_007204.1 contains ATP/GTP binding Ploop; hypothetical protein 1672740 3515341 Psyc_1383 Psychrobacter arcticus 273-4 hypothetical protein YP_264665.1 1668805 D 259536 CDS YP_264666.1 71065939 3515342 1672737..1673360 1 NC_007204.1 hypothetical protein 1673360 3515342 Psyc_1384 Psychrobacter arcticus 273-4 hypothetical protein YP_264666.1 1672737 D 259536 CDS YP_264667.1 71065940 3515343 1673357..1674685 1 NC_007204.1 RBS found; hypothetical protein 1674685 3515343 Psyc_1385 Psychrobacter arcticus 273-4 hypothetical protein YP_264667.1 1673357 D 259536 CDS YP_264668.1 71065941 3515344 1674658..1675569 1 NC_007204.1 RBS found; hypothetical protein 1675569 3515344 Psyc_1386 Psychrobacter arcticus 273-4 hypothetical protein YP_264668.1 1674658 D 259536 CDS YP_264669.1 71065942 3515345 complement(1675747..1677429) 1 NC_007204.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 1677429 3515345 Psyc_1387 Psychrobacter arcticus 273-4 malate dehydrogenase YP_264669.1 1675747 R 259536 CDS YP_264670.1 71065943 3515346 1678189..1679364 1 NC_007204.1 serine-glyoxylate aminotransferase 1679364 sgaA 3515346 sgaA Psychrobacter arcticus 273-4 serine-glyoxylate aminotransferase YP_264670.1 1678189 D 259536 CDS YP_264671.1 71065944 3515347 1679444..1680424 1 NC_007204.1 threonine dehydratase 1680424 tdcB 3515347 tdcB Psychrobacter arcticus 273-4 threonine dehydratase YP_264671.1 1679444 D 259536 CDS YP_264672.1 71065945 3515348 1680540..1681691 1 NC_007204.1 Citation: Appl Microbiol Biotechnol. 2003 Jul;62(1):53-60; D-3-hydroxyaspartate aldolase 1681691 dhaa 3515348 dhaa Psychrobacter arcticus 273-4 D-3-hydroxyaspartate aldolase YP_264672.1 1680540 D 259536 CDS YP_264673.1 71065946 3515349 1681816..1682817 1 NC_007204.1 ornithine cyclodeaminase 1682817 ocd 3515349 ocd Psychrobacter arcticus 273-4 ornithine cyclodeaminase YP_264673.1 1681816 D 259536 CDS YP_264674.1 71065947 3515350 1683261..1685429 1 NC_007204.1 pyridine nucleotide-disulfide oxidoreductase 1685429 3515350 Psyc_1392 Psychrobacter arcticus 273-4 pyridine nucleotide-disulfide oxidoreductase YP_264674.1 1683261 D 259536 CDS YP_264675.1 71065948 3515351 1685585..1686403 1 NC_007204.1 sterol desaturase 1686403 3515351 Psyc_1393 Psychrobacter arcticus 273-4 sterol desaturase YP_264675.1 1685585 D 259536 CDS YP_264676.1 71065949 3515352 1686635..1687189 1 NC_007204.1 hypothetical protein 1687189 3515352 Psyc_1394 Psychrobacter arcticus 273-4 hypothetical protein YP_264676.1 1686635 D 259536 CDS YP_264677.1 71065950 3515353 complement(1687382..1687990) 1 NC_007204.1 bind DNA via a helix-turn-helix (HTH) motif. possible acrR subfamily but weak sequence similarity.; TetR family transcriptional regulator 1687990 3515353 Psyc_1395 Psychrobacter arcticus 273-4 TetR family transcriptional regulator YP_264677.1 1687382 R 259536 CDS YP_264678.1 71065951 3515354 1688186..1688881 1 NC_007204.1 haloacid dehalogenase 1688881 3515354 Psyc_1396 Psychrobacter arcticus 273-4 haloacid dehalogenase YP_264678.1 1688186 D 259536 CDS YP_264679.1 71065952 3515355 1689070..1689603 1 NC_007204.1 hypothetical protein 1689603 yaiL 3515355 yaiL Psychrobacter arcticus 273-4 hypothetical protein YP_264679.1 1689070 D 259536 CDS YP_264680.1 71065953 3515356 1690487..1691695 1 NC_007204.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1691695 fadA4 3515356 fadA4 Psychrobacter arcticus 273-4 acetyl-CoA acetyltransferase YP_264680.1 1690487 D 259536 CDS YP_264681.1 71065954 3515357 1691898..1694069 1 NC_007204.1 3-hydroxyacyl-CoA dehydrogenase 1694069 3515357 Psyc_1399 Psychrobacter arcticus 273-4 3-hydroxyacyl-CoA dehydrogenase YP_264681.1 1691898 D 259536 CDS YP_264682.1 71065955 3515358 1694062..1695123 1 NC_007204.1 Citation: A new family of CoA-transferases. Heider J. FEBS Lett 2001;509:345-349.; CoA-transferase family III protein 1695123 3515358 Psyc_1400 Psychrobacter arcticus 273-4 CoA-transferase family III protein YP_264682.1 1694062 D 259536 CDS YP_264683.1 71065956 3515359 1695780..1696502 1 NC_007204.1 permease transmembrane protein 1696502 3515359 Psyc_1401 Psychrobacter arcticus 273-4 permease transmembrane protein YP_264683.1 1695780 D 259536 CDS YP_264684.1 71065957 3515360 1696785..1697495 1 NC_007204.1 pirin 1697495 3515360 Psyc_1402 Psychrobacter arcticus 273-4 pirin YP_264684.1 1696785 D 259536 CDS YP_264685.1 71065958 3515361 1697731..1698927 1 NC_007204.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1698927 tyrB 3515361 tyrB Psychrobacter arcticus 273-4 aromatic amino acid aminotransferase YP_264685.1 1697731 D 259536 CDS YP_264686.1 71065959 3515362 1699158..1700369 1 NC_007204.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1700369 queA 3515362 queA Psychrobacter arcticus 273-4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_264686.1 1699158 D 259536 CDS YP_264687.1 71065960 3515363 1700490..1702304 1 NC_007204.1 LysM domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.994) with cleavage site probability 0.849 at residue 36; hypothetical protein 1702304 3515363 Psyc_1405 Psychrobacter arcticus 273-4 hypothetical protein YP_264687.1 1700490 D 259536 CDS YP_264688.1 71065961 3515364 1702355..1703950 1 NC_007204.1 contains TPR repeat know to be involved in protein-protein interaction; hypothetical protein 1703950 3515364 Psyc_1406 Psychrobacter arcticus 273-4 hypothetical protein YP_264688.1 1702355 D 259536 CDS YP_264689.1 71065962 3515365 1704113..1705198 1 NC_007204.1 type I L-asparaginase 1705198 ansA 3515365 ansA Psychrobacter arcticus 273-4 type I L-asparaginase YP_264689.1 1704113 D 259536 CDS YP_264690.1 71065963 3515366 1705244..1706074 1 NC_007204.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1706074 truA 3515366 truA Psychrobacter arcticus 273-4 tRNA pseudouridine synthase A YP_264690.1 1705244 D 259536 CDS YP_264691.1 71065964 3515367 1706187..1706420 1 NC_007204.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1706420 infA 3515367 infA Psychrobacter arcticus 273-4 translation initiation factor IF-1 YP_264691.1 1706187 D 259536 CDS YP_264692.1 71065965 3515368 complement(1706719..1707822) 1 NC_007204.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1707822 leuB 3515368 leuB Psychrobacter arcticus 273-4 3-isopropylmalate dehydrogenase YP_264692.1 1706719 R 259536 CDS YP_264693.1 71065966 3515369 complement(1707907..1708644) 1 NC_007204.1 Predicted by generation, glimmer and critica. 1 transmembrane helice, 23 base cleavage site predicted; hypothetical protein 1708644 3515369 Psyc_1411 Psychrobacter arcticus 273-4 hypothetical protein YP_264693.1 1707907 R 259536 CDS YP_264694.1 71065967 3515370 complement(1708818..1709468) 1 NC_007204.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 1709468 leuD 3515370 leuD Psychrobacter arcticus 273-4 isopropylmalate isomerase small subunit YP_264694.1 1708818 R 259536 CDS YP_264695.1 71065968 3515371 complement(1709516..1710934) 1 NC_007204.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1710934 leuC 3515371 leuC Psychrobacter arcticus 273-4 isopropylmalate isomerase large subunit YP_264695.1 1709516 R 259536 CDS YP_264696.1 71065969 3515372 1711249..1712121 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.701) with cleavage site probability 0.650 at residue 22; LysR family transcriptional regulator 1712121 lysR 3515372 lysR Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_264696.1 1711249 D 259536 CDS YP_264697.1 71065970 3515373 1712659..1714158 1 NC_007204.1 SSS family Na(+)/proline symporter 1714158 3515373 Psyc_1415 Psychrobacter arcticus 273-4 SSS family Na(+)/proline symporter YP_264697.1 1712659 D 259536 CDS YP_264698.1 71065971 3515374 complement(1714247..1715461) 1 NC_007204.1 outer membrane protein 1715461 3515374 Psyc_1416 Psychrobacter arcticus 273-4 outer membrane protein YP_264698.1 1714247 R 259536 CDS YP_264699.1 71065972 3515375 complement(1715842..1717002) 1 NC_007204.1 FadL family outer membrane protein 1717002 3515375 Psyc_1417 Psychrobacter arcticus 273-4 FadL family outer membrane protein YP_264699.1 1715842 R 259536 CDS YP_264700.1 71065973 3515376 complement(1717224..1717505) 1 NC_007204.1 Predicted by generation, glimmer and critica. 3 site rbs; hypothetical protein 1717505 3515376 Psyc_1418 Psychrobacter arcticus 273-4 hypothetical protein YP_264700.1 1717224 R 259536 CDS YP_264701.1 71065974 3515377 1717701..1719647 1 NC_007204.1 ABC transporter:AAA ATPase 1719647 3515377 Psyc_1419 Psychrobacter arcticus 273-4 ABC transporter:AAA ATPase YP_264701.1 1717701 D 259536 CDS YP_264702.1 71065975 3515378 1720079..1720663 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.906) with cleavage site probability 0.392 at residue 32; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1720663 3515378 Psyc_1420 Psychrobacter arcticus 273-4 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_264702.1 1720079 D 259536 CDS YP_264703.1 71065976 3515379 1720686..1721891 1 NC_007204.1 cytochrome b, b6 subunit 1721891 3515379 Psyc_1421 Psychrobacter arcticus 273-4 cytochrome b, b6 subunit YP_264703.1 1720686 D 259536 CDS YP_264704.1 71065977 3515380 1721891..1722604 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 at residue 27; ubiquinol cytochrome c1 reductase 1722604 3515380 Psyc_1422 Psychrobacter arcticus 273-4 ubiquinol cytochrome c1 reductase YP_264704.1 1721891 D 259536 CDS YP_264705.1 71065978 3515381 1722800..1723414 1 NC_007204.1 -adjacent or2766 is sspB, possible evidence supporting sspA assignment for this protein; Citation: Hansen A.M., Lehnherr H., Wang X., Mobley V., Jin D.J. (2003) Escherichia coli SspA is a transcription activator for bacteriophage P1 late genes. Mol Microbiol 48:1621-1631.; stringent starvation protein A 1723414 sspA 3515381 sspA Psychrobacter arcticus 273-4 stringent starvation protein A YP_264705.1 1722800 D 259536 CDS YP_264706.1 71065979 3515382 1723564..1724004 1 NC_007204.1 ClpXP protease specificity-enhancing factor 1724004 sspB 3515382 sspB Psychrobacter arcticus 273-4 ClpXP protease specificity-enhancing factor YP_264706.1 1723564 D 259536 CDS YP_264707.1 71065980 3515383 complement(1724093..1724668) 1 NC_007204.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1724668 dcd 3515383 dcd Psychrobacter arcticus 273-4 deoxycytidine triphosphate deaminase YP_264707.1 1724093 R 259536 CDS YP_264708.1 71065981 3515384 complement(1725154..1726380) 1 NC_007204.1 ATP-binding protein 1726380 3515384 Psyc_1426 Psychrobacter arcticus 273-4 ATP-binding protein YP_264708.1 1725154 R 259536 CDS YP_264709.1 71065982 3515385 1726784..1727665 1 NC_007204.1 There are 9 addittional ORFs identical to this one.; IS4 family transposase 1727665 3515385 Psyc_1427 Psychrobacter arcticus 273-4 IS4 family transposase YP_264709.1 1726784 D 259536 CDS YP_264710.1 71065983 3515386 complement(1727710..1728510) 1 NC_007204.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 1728510 3515386 Psyc_1428 Psychrobacter arcticus 273-4 3-hydroxybutyrate dehydrogenase YP_264710.1 1727710 R 259536 CDS YP_264711.1 71065984 3515387 complement(1728589..1729218) 1 NC_007204.1 butyryl-CoA:acetate CoA transferase 1729218 3515387 Psyc_1429 Psychrobacter arcticus 273-4 butyryl-CoA:acetate CoA transferase YP_264711.1 1728589 R 259536 CDS YP_264712.1 71065985 3515388 complement(1729295..1730008) 1 NC_007204.1 coenzyme A transferase 1730008 lpsI 3515388 lpsI Psychrobacter arcticus 273-4 coenzyme A transferase YP_264712.1 1729295 R 259536 CDS YP_264713.1 71065986 3515389 1730274..1731689 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.911) with cleavage site probability 0.549 at residue 22; GntP family transporter 1731689 3515389 Psyc_1431 Psychrobacter arcticus 273-4 GntP family transporter YP_264713.1 1730274 D 259536 CDS YP_264714.1 71065987 3515390 1731996..1734098 1 NC_007204.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1734098 metG 3515390 metG Psychrobacter arcticus 273-4 methionyl-tRNA synthetase YP_264714.1 1731996 D 259536 CDS YP_264715.1 71065988 3515391 complement(1734213..1734650) 1 NC_007204.1 Predicted by generation, glimmer and critica. Predicted signalP cleavage site. strong rbs; hypothetical protein 1734650 3515391 Psyc_1433 Psychrobacter arcticus 273-4 hypothetical protein YP_264715.1 1734213 R 259536 CDS YP_264716.1 71065989 3515392 1735049..1736098 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.523 at residue 27; ABC transporter substrate-binding protein 1736098 3515392 Psyc_1434 Psychrobacter arcticus 273-4 ABC transporter substrate-binding protein YP_264716.1 1735049 D 259536 CDS YP_264717.1 71065990 3515393 1736273..1737298 1 NC_007204.1 ABC transporter substrate-binding protein 1737298 3515393 Psyc_1435 Psychrobacter arcticus 273-4 ABC transporter substrate-binding protein YP_264717.1 1736273 D 259536 CDS YP_264718.1 71065991 3515394 1737634..1738533 1 NC_007204.1 ABC transporter inner membrane subunit 1738533 3515394 Psyc_1436 Psychrobacter arcticus 273-4 ABC transporter inner membrane subunit YP_264718.1 1737634 D 259536 CDS YP_264719.1 71065992 3515395 1738565..1739359 1 NC_007204.1 ABC transporter ATPase 1739359 3515395 Psyc_1437 Psychrobacter arcticus 273-4 ABC transporter ATPase YP_264719.1 1738565 D 259536 CDS YP_264720.1 71065993 3515396 complement(1739370..1739984) 1 NC_007204.1 Response regulatory domain found N-terminal to a DNA binding effector domain of LuxR family; Citation: Pao G.M. , Saier M.H. Response regulators of bacterial signal transduction systems: selective domain shuffling during evolution. J. Mol. Evol. 40: 136- 154 (1995) [PubMed: 7699720 ]; LuxR family transcriptional regulator 1739984 3515396 Psyc_1438 Psychrobacter arcticus 273-4 LuxR family transcriptional regulator YP_264720.1 1739370 R 259536 CDS YP_264721.1 71065994 3515397 complement(1739988..1742129) 1 NC_007204.1 Signal transduction histidine kinase sensor 1742129 ttrS 3515397 ttrS Psychrobacter arcticus 273-4 Signal transduction histidine kinase sensor YP_264721.1 1739988 R 259536 CDS YP_264722.1 71065995 3515398 1742344..1743744 1 NC_007204.1 cytochrome c, class I 1743744 3515398 Psyc_1440 Psychrobacter arcticus 273-4 cytochrome c, class I YP_264722.1 1742344 D 259536 CDS YP_264723.1 71065996 3515399 1743744..1744679 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.631) with cleavage site probability 0.394 at residue 34; cytochrome c 1744679 3515399 Psyc_1441 Psychrobacter arcticus 273-4 cytochrome c YP_264723.1 1743744 D 259536 CDS YP_264724.1 71065997 3515400 1744865..1747258 1 NC_007204.1 formate dehydrogenase 1747258 3515400 Psyc_1442 Psychrobacter arcticus 273-4 formate dehydrogenase YP_264724.1 1744865 D 259536 CDS YP_264725.1 71065998 3515401 1747369..1748379 1 NC_007204.1 formate dehydrogenase accessory protein FdhD 1748379 fdhD 3515401 fdhD Psychrobacter arcticus 273-4 formate dehydrogenase accessory protein FdhD YP_264725.1 1747369 D 259536 CDS YP_264726.1 71065999 3515402 1748905..1749231 1 NC_007204.1 transposase 1749231 3515402 Psyc_1444 Psychrobacter arcticus 273-4 transposase YP_264726.1 1748905 D 259536 CDS YP_264727.1 71066000 3515405 1750440..1750943 1 NC_007204.1 hypothetical protein 1750943 3515405 Psyc_1445 Psychrobacter arcticus 273-4 hypothetical protein YP_264727.1 1750440 D 259536 CDS YP_264728.1 71066001 3515406 1751547..1754312 1 NC_007204.1 evidence for ATP dependence from binding site, luxR family binding site at C-terminus. Closest match to MalT due to size of protein.; LuxR family transcriptional regulator 1754312 malT 3515406 malT Psychrobacter arcticus 273-4 LuxR family transcriptional regulator YP_264728.1 1751547 D 259536 CDS YP_264729.1 71066002 3515407 complement(1754457..1755248) 1 NC_007204.1 RBS found.; hypothetical protein 1755248 3515407 Psyc_1447 Psychrobacter arcticus 273-4 hypothetical protein YP_264729.1 1754457 R 259536 CDS YP_264730.1 71066003 3515408 complement(1755408..1757714) 1 NC_007204.1 acetone carboxylase subunit alpha 1757714 3515408 Psyc_1448 Psychrobacter arcticus 273-4 acetone carboxylase subunit alpha YP_264730.1 1755408 R 259536 CDS YP_264731.1 71066004 3515409 complement(1757762..1759900) 1 NC_007204.1 acetone carboxylase subunit beta 1759900 3515409 Psyc_1449 Psychrobacter arcticus 273-4 acetone carboxylase subunit beta YP_264731.1 1757762 R 259536 CDS YP_264732.1 71066005 3515410 complement(1759914..1760375) 1 NC_007204.1 Citation: Miriam K. Sluis and Scott A., Proc. Natl. Acad. Sci. USA. 1997 August 5; 94 (16): 8456-8461; acetone carboxylase subunit gamma 1760375 acxC 3515410 acxC Psychrobacter arcticus 273-4 acetone carboxylase subunit gamma YP_264732.1 1759914 R 259536 CDS YP_264733.1 71066006 3515411 complement(1760421..1762340) 1 NC_007204.1 hydantoinase/oxoprolinase family protein 1762340 3515411 Psyc_1451 Psychrobacter arcticus 273-4 hydantoinase/oxoprolinase family protein YP_264733.1 1760421 R 259536 CDS YP_264734.1 71066007 3515412 1762694..1763005 1 NC_007204.1 contains fis type helix turn helix motif suggesting nucleic acid binding; IS1329/IS3/IS911 transposase 1763005 3515412 Psyc_1452 Psychrobacter arcticus 273-4 IS1329/IS3/IS911 transposase YP_264734.1 1762694 D 259536 CDS YP_264735.1 71066008 3515413 1763068..1763877 1 NC_007204.1 Integrase, catalytic domain; transposase orfAB 1763877 3515413 Psyc_1453 Psychrobacter arcticus 273-4 transposase orfAB YP_264735.1 1763068 D 259536 CDS YP_264736.1 71066009 3515415 complement(1764700..1765371) 1 NC_007204.1 phospholipase/carboxylesterase family protein 1765371 3515415 Psyc_1454 Psychrobacter arcticus 273-4 phospholipase/carboxylesterase family protein YP_264736.1 1764700 R 259536 CDS YP_264737.1 71066010 3515416 complement(1765574..1766677) 1 NC_007204.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1766677 aroC 3515416 aroC Psychrobacter arcticus 273-4 chorismate synthase YP_264737.1 1765574 R 259536 CDS YP_264738.1 71066011 3515417 complement(1766870..1768045) 1 NC_007204.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1768045 hemK 3515417 hemK Psychrobacter arcticus 273-4 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_264738.1 1766870 R 259536 CDS YP_264739.1 71066012 3515418 1768415..1769836 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.997) with cleavage site probability 0.995 at residue 48; ErfK/YbiS/YcfS/YnhG protein family protein 1769836 3515418 Psyc_1457 Psychrobacter arcticus 273-4 ErfK/YbiS/YcfS/YnhG protein family protein YP_264739.1 1768415 D 259536 CDS YP_264740.1 71066013 3515419 1769984..1770502 1 NC_007204.1 IS3/IS911 family transposase orfA 1770502 3515419 Psyc_1458 Psychrobacter arcticus 273-4 IS3/IS911 family transposase orfA YP_264740.1 1769984 D 259536 CDS YP_264741.1 71066014 3515420 1770544..1771329 1 NC_007204.1 IS3 family transposase 1771329 3515420 Psyc_1459 Psychrobacter arcticus 273-4 IS3 family transposase YP_264741.1 1770544 D 259536 CDS YP_264742.1 71066015 3515421 1772104..1774776 1 NC_007204.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1774776 alaS 3515421 alaS Psychrobacter arcticus 273-4 alanyl-tRNA synthetase YP_264742.1 1772104 D 259536 CDS YP_264743.1 71066016 3515422 1775245..1776531 1 NC_007204.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1776531 lysC 3515422 lysC Psychrobacter arcticus 273-4 aspartate kinase YP_264743.1 1775245 D 259536 CDS YP_264744.1 71066017 3515423 1776935..1777180 1 NC_007204.1 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 1777180 csrA 3515423 csrA Psychrobacter arcticus 273-4 carbon storage regulator YP_264744.1 1776935 D 259536 CDS YP_264745.1 71066018 3515424 1777266..1777640 1 NC_007204.1 hypothetical protein 1777640 3515424 Psyc_1463 Psychrobacter arcticus 273-4 hypothetical protein YP_264745.1 1777266 D 259536 CDS YP_264746.1 71066019 3515425 complement(1777760..1778071) 1 NC_007204.1 Aligns to COG3139: Uncharacterized protein; hypothetical protein 1778071 3515425 Psyc_1464 Psychrobacter arcticus 273-4 hypothetical protein YP_264746.1 1777760 R 259536 CDS YP_264747.1 71066020 3515426 complement(1778127..1779146) 1 NC_007204.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1779146 ppnK 3515426 ppnK Psychrobacter arcticus 273-4 inorganic polyphosphate/ATP-NAD kinase YP_264747.1 1778127 R 259536 CDS YP_264748.1 71066021 3515427 1779392..1780114 1 NC_007204.1 contains 7 predicted transmembrane regions; hypothetical protein 1780114 3515427 Psyc_1466 Psychrobacter arcticus 273-4 hypothetical protein YP_264748.1 1779392 D 259536 CDS YP_264749.1 71066022 3515428 complement(1780205..1783057) 1 NC_007204.1 heavy metal efflux P-type ATPase 1783057 3515428 Psyc_1467 Psychrobacter arcticus 273-4 heavy metal efflux P-type ATPase YP_264749.1 1780205 R 259536 CDS YP_264750.1 71066023 3515429 1783417..1785900 1 NC_007204.1 penicillin-binding protein transpeptidase domain-containing protein 1785900 mrcB 3515429 mrcB Psychrobacter arcticus 273-4 penicillin-binding protein transpeptidase domain-containing protein YP_264750.1 1783417 D 259536 CDS YP_264751.1 71066024 3515430 1786000..1786875 1 NC_007204.1 protein interacting Tpr repeat domain; Citation: ieter P. , Tugendreich S. , Lamb J.R. Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem. Sci. 20: 257- 259 (1995) [PubMed: 7667876 ]; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.989) with cleavage site probability 0.571 at residue 44; hypothetical protein 1786875 3515430 Psyc_1469 Psychrobacter arcticus 273-4 hypothetical protein YP_264751.1 1786000 D 259536 CDS YP_264752.1 71066025 3515431 1786992..1787918 1 NC_007204.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 1787918 prmA 3515431 prmA Psychrobacter arcticus 273-4 50S ribosomal protein L11 methyltransferase YP_264752.1 1786992 D 259536 CDS YP_264753.1 71066026 3515432 1788227..1788586 1 NC_007204.1 helix-turn-helix; Fis family transcriptional regulator 1788586 fis 3515432 fis Psychrobacter arcticus 273-4 Fis family transcriptional regulator YP_264753.1 1788227 D 259536 CDS YP_264754.1 71066027 3515433 1788784..1790364 1 NC_007204.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1790364 purH 3515433 purH Psychrobacter arcticus 273-4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_264754.1 1788784 D 259536 CDS YP_264755.1 71066028 3515434 complement(1790558..1792432) 1 NC_007204.1 PpiC-type peptidyl-prolyl cis-trans isomerase 1792432 3515434 Psyc_1473 Psychrobacter arcticus 273-4 PpiC-type peptidyl-prolyl cis-trans isomerase YP_264755.1 1790558 R 259536 CDS YP_264756.1 71066029 3515435 complement(1792826..1793098) 1 NC_007204.1 DNA-binding protein HU-beta 1793098 hupB 3515435 hupB Psychrobacter arcticus 273-4 DNA-binding protein HU-beta YP_264756.1 1792826 R 259536 CDS YP_264757.1 71066030 3515436 1793745..1794392 1 NC_007204.1 RBS found. Contains two predicted transmembrane domains.; hypothetical protein 1794392 3515436 Psyc_1475 Psychrobacter arcticus 273-4 hypothetical protein YP_264757.1 1793745 D 259536 CDS YP_264758.1 71066031 3515437 1794791..1795303 1 NC_007204.1 These are small proteins of 12 to 18 kD which seem to contain a signal sequence, and may represent a family of probable transcriptional regulators.; Winged helix DNA-binding; BadM/Rrf2 family transcriptional regulator 1795303 3515437 Psyc_1476 Psychrobacter arcticus 273-4 BadM/Rrf2 family transcriptional regulator YP_264758.1 1794791 D 259536 CDS YP_264759.1 71066032 3515438 1795300..1796526 1 NC_007204.1 cysteine desulfurase 1796526 3515438 Psyc_1477 Psychrobacter arcticus 273-4 cysteine desulfurase YP_264759.1 1795300 D 259536 CDS YP_264760.1 71066033 3515439 1796739..1797125 1 NC_007204.1 N-terminal only; scaffold protein 1797125 nifU 3515439 nifU Psychrobacter arcticus 273-4 scaffold protein YP_264760.1 1796739 D 259536 CDS YP_264761.1 71066034 3515440 1797344..1797664 1 NC_007204.1 HesB/YadR/YfhF family protein 1797664 3515440 Psyc_1479 Psychrobacter arcticus 273-4 HesB/YadR/YfhF family protein YP_264761.1 1797344 D 259536 CDS YP_264762.1 71066035 3515441 1797725..1798306 1 NC_007204.1 co-chaperone Hsc20 heat shock proteins related 1798306 hscB 3515441 hscB Psychrobacter arcticus 273-4 co-chaperone Hsc20 heat shock proteins related YP_264762.1 1797725 D 259536 CDS YP_264763.1 71066036 3515442 1798560..1800437 1 NC_007204.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 1800437 hscA 3515442 hscA Psychrobacter arcticus 273-4 chaperone protein HscA YP_264763.1 1798560 D 259536 CDS YP_264764.1 71066037 3515443 1800535..1800873 1 NC_007204.1 ferredoxin, 2Fe-2S type 1800873 3515443 Psyc_1482 Psychrobacter arcticus 273-4 ferredoxin, 2Fe-2S type YP_264764.1 1800535 D 259536 CDS YP_264765.1 71066038 3515444 complement(1801251..1801682) 1 NC_007204.1 histidine triad (HIT) family protein 1801682 3515444 Psyc_1483 Psychrobacter arcticus 273-4 histidine triad (HIT) family protein YP_264765.1 1801251 R 259536 CDS YP_264766.1 71066039 3515445 complement(1801921..1805652) 1 NC_007204.1 DExH/D-box domain found in ATPases that have been proposed to mediate RNA structural rearrangements in a variety of cellular processes, including nuclear pre-mRNA splicing, ribosome assembly, protein synthesis, nuclear transport, and RNA degradation .; Citation: Linder P. , Schmid S.R. D-E-A-D protein family of RNA helicases. Mol. Microbiol. 6: 283- 292 (1992) [PubMed: 1552844 ]; transcription-repair coupling factor 1805652 mfd 3515445 mfd Psychrobacter arcticus 273-4 transcription-repair coupling factor YP_264766.1 1801921 R 259536 CDS YP_264767.1 71066040 3515446 complement(1805883..1806416) 1 NC_007204.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 1806416 menG 3515446 menG Psychrobacter arcticus 273-4 ribonuclease activity regulator protein RraA YP_264767.1 1805883 R 259536 CDS YP_264768.1 71066041 3515447 complement(1806524..1807225) 1 NC_007204.1 oxidoreductase 1807225 3515447 Psyc_1486 Psychrobacter arcticus 273-4 oxidoreductase YP_264768.1 1806524 R 259536 CDS YP_264769.1 71066042 3515448 1807754..1808020 1 NC_007204.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1808020 rpsT 3515448 rpsT Psychrobacter arcticus 273-4 30S ribosomal protein S20 YP_264769.1 1807754 D 259536 CDS YP_264770.1 71066043 3515449 complement(1808149..1808985) 1 NC_007204.1 Predicted by generation, glimmer and critica. 3 base RBS.; hypothetical protein 1808985 3515449 Psyc_1488 Psychrobacter arcticus 273-4 hypothetical protein YP_264770.1 1808149 R 259536 CDS YP_264771.1 71066044 3515450 complement(1809306..1810118) 1 NC_007204.1 metallo-phosphoesterase 1810118 3515450 Psyc_1489 Psychrobacter arcticus 273-4 metallo-phosphoesterase YP_264771.1 1809306 R 259536 CDS YP_264772.1 71066045 3515451 1810294..1811175 1 NC_007204.1 There are 9 addittional ORFs identical to this one.; IS4 family transposase 1811175 3515451 Psyc_1490 Psychrobacter arcticus 273-4 IS4 family transposase YP_264772.1 1810294 D 259536 CDS YP_264773.1 71066046 3515452 complement(1811238..1811936) 1 NC_007204.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1811936 pyrF 3515452 pyrF Psychrobacter arcticus 273-4 orotidine 5'-phosphate decarboxylase YP_264773.1 1811238 R 259536 CDS YP_264774.1 71066047 3515453 complement(1812012..1812440) 1 NC_007204.1 Predicted by generation, glimmer and critica. Good rbs. 2 transmembrane helices and predicted signal P cleavage site; hypothetical protein 1812440 3515453 Psyc_1492 Psychrobacter arcticus 273-4 hypothetical protein YP_264774.1 1812012 R 259536 CDS YP_264775.1 71066048 3515454 complement(1812600..1812848) 1 NC_007204.1 histone-like DNA-binding protein 1812848 3515454 Psyc_1493 Psychrobacter arcticus 273-4 histone-like DNA-binding protein YP_264775.1 1812600 R 259536 CDS YP_264776.1 71066049 3515455 complement(1813226..1814917) 1 NC_007204.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1814917 rpsA 3515455 rpsA Psychrobacter arcticus 273-4 30S ribosomal protein S1 YP_264776.1 1813226 R 259536 CDS YP_264777.1 71066050 3515456 complement(1815228..1815983) 1 NC_007204.1 cytidylate kinase 1815983 cmkA 3515456 cmkA Psychrobacter arcticus 273-4 cytidylate kinase YP_264777.1 1815228 R 259536 CDS YP_264778.1 71066051 3515457 complement(1816145..1816732) 1 NC_007204.1 Contains family-specific zinc binding domain; tRNA-adenosine deaminase 1816732 cumB 3515457 cumB Psychrobacter arcticus 273-4 tRNA-adenosine deaminase YP_264778.1 1816145 R 259536 CDS YP_264779.1 71066052 3515458 complement(1816733..1817476) 1 NC_007204.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1817476 ung 3515458 ung Psychrobacter arcticus 273-4 uracil-DNA glycosylase YP_264779.1 1816733 R 259536 CDS YP_264780.1 71066053 3515459 complement(1817787..1820336) 1 NC_007204.1 ATP-dependent Clp protease ATP-binding subunit ClpA 1820336 clpA 3515459 clpA Psychrobacter arcticus 273-4 ATP-dependent Clp protease ATP-binding subunit ClpA YP_264780.1 1817787 R 259536 CDS YP_264781.1 71066054 3515460 complement(1821004..1821420) 1 NC_007204.1 Contains ClpS HMM (formerly DUF174). This orf occurs immediately upstream of clpA.; ATP-dependent Clp protease adapter protein 1821420 clpS 3515460 clpS Psychrobacter arcticus 273-4 ATP-dependent Clp protease adapter protein YP_264781.1 1821004 R 259536 CDS YP_264782.1 71066055 3515461 complement(1821538..1822422) 1 NC_007204.1 1 predicted transmembrane domain. Predicted by glimmer, critica and generation, good rbs; hypothetical protein 1822422 3515461 Psyc_1500 Psychrobacter arcticus 273-4 hypothetical protein YP_264782.1 1821538 R 259536 CDS YP_264783.1 71066056 3515462 complement(1822526..1823593) 1 NC_007204.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1823593 argC 3515462 argC Psychrobacter arcticus 273-4 N-acetyl-gamma-glutamyl-phosphate reductase YP_264783.1 1822526 R 259536 CDS YP_264784.1 71066057 3515463 complement(1823686..1824822) 1 NC_007204.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1824822 hemE 3515463 hemE Psychrobacter arcticus 273-4 uroporphyrinogen decarboxylase YP_264784.1 1823686 R 259536 CDS YP_264785.1 71066058 3515464 complement(1824943..1826115) 1 NC_007204.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1826115 proB 3515464 proB Psychrobacter arcticus 273-4 gamma-glutamyl kinase YP_264785.1 1824943 R 259536 CDS YP_264786.1 71066059 3515465 complement(1826188..1827405) 1 NC_007204.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1827405 obgE 3515465 obgE Psychrobacter arcticus 273-4 GTPase ObgE YP_264786.1 1826188 R 259536 CDS YP_264787.1 71066060 3515466 complement(1827673..1829118) 1 NC_007204.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 1829118 gapA 3515466 gapA Psychrobacter arcticus 273-4 glyceraldehyde-3-phosphate dehydrogenase YP_264787.1 1827673 R 259536 CDS YP_264788.1 71066061 3515467 complement(1829741..1830478) 1 NC_007204.1 hypothetical protein 1830478 3515467 Psyc_1506 Psychrobacter arcticus 273-4 hypothetical protein YP_264788.1 1829741 R 259536 CDS YP_264789.1 71066062 3515468 complement(1830988..1832070) 1 NC_007204.1 NUDIX hydrolase 1832070 3515468 Psyc_1507 Psychrobacter arcticus 273-4 NUDIX hydrolase YP_264789.1 1830988 R 259536 CDS YP_264790.1 71066063 3515469 1832207..1832458 1 NC_007204.1 No RBS found.; hypothetical protein 1832458 3515469 Psyc_1508 Psychrobacter arcticus 273-4 hypothetical protein YP_264790.1 1832207 D 259536 CDS YP_264791.1 71066064 3515470 complement(1832731..1837725) 1 NC_007204.1 RBS found.; hypothetical protein 1837725 3515470 Psyc_1509 Psychrobacter arcticus 273-4 hypothetical protein YP_264791.1 1832731 R 259536 CDS YP_264792.1 71066065 3515471 complement(1837804..1840941) 1 NC_007204.1 hypothetical protein 1840941 3515471 Psyc_1510 Psychrobacter arcticus 273-4 hypothetical protein YP_264792.1 1837804 R 259536 CDS YP_264793.1 71066066 3515472 1841434..1842774 1 NC_007204.1 major facilitator transporter 1842774 3515472 Psyc_1511 Psychrobacter arcticus 273-4 major facilitator transporter YP_264793.1 1841434 D 259536 CDS YP_264794.1 71066067 3515473 1842969..1843613 1 NC_007204.1 Ubiquinone biosyntheis proteins are central metabolic regulatory proteins and the side chain of ubiquinones play a significant role in respiration; ubiquinone biosyntheis protein COQ7 1843613 3515473 Psyc_1512 Psychrobacter arcticus 273-4 ubiquinone biosyntheis protein COQ7 YP_264794.1 1842969 D 259536 CDS YP_264795.1 71066068 3515474 1843839..1844978 1 NC_007204.1 alanine rich region at N-terminus suggests membrane glycoprotein as do blast hits; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 1.000 at residue 35; hypothetical protein 1844978 3515474 Psyc_1513 Psychrobacter arcticus 273-4 hypothetical protein YP_264795.1 1843839 D 259536 CDS YP_264796.1 71066069 3515475 1845245..1847851 1 NC_007204.1 serine dependent catalytic site present; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.343 at residue 40; hypothetical protein 1847851 3515475 Psyc_1514 Psychrobacter arcticus 273-4 hypothetical protein YP_264796.1 1845245 D 259536 CDS YP_264797.1 71066070 3515476 1848473..1849996 1 NC_007204.1 cytochrome bd ubiquinol oxidase, subunit I 1849996 cydA 3515476 cydA Psychrobacter arcticus 273-4 cytochrome bd ubiquinol oxidase, subunit I YP_264797.1 1848473 D 259536 CDS YP_264798.1 71066071 3515477 1849996..1851012 1 NC_007204.1 cytochrome bd ubiquinol oxidase subunit II 1851012 cydB 3515477 cydB Psychrobacter arcticus 273-4 cytochrome bd ubiquinol oxidase subunit II YP_264798.1 1849996 D 259536 CDS YP_264799.1 71066072 3515478 complement(1851432..1852172) 1 NC_007204.1 eIF-2Bgamma; eIF-2Bepsilon; translation initiation factor 2B gamma and epsilon subunits; nucleotidyl transferase 1852172 3515478 Psyc_1517 Psychrobacter arcticus 273-4 nucleotidyl transferase YP_264799.1 1851432 R 259536 CDS YP_264800.1 71066073 3515479 complement(1852227..1853366) 1 NC_007204.1 Aligns to COG3178: Predicted phosphotransferase; hypothetical protein 1853366 3515479 Psyc_1518 Psychrobacter arcticus 273-4 hypothetical protein YP_264800.1 1852227 R 259536 CDS YP_264801.1 71066074 3515480 1853684..1856422 1 NC_007204.1 PFAM data suggest two domain structure with a MP dehydrogenase/GMP reductase domain in the 5' end; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.982 at residue 28; organic solvent tolerance protein 1856422 ostA 3515480 ostA Psychrobacter arcticus 273-4 organic solvent tolerance protein YP_264801.1 1853684 D 259536 CDS YP_264802.1 71066075 3515481 1856615..1858012 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 at residue 32; peptidyl-prolyl isomerase 1858012 3515481 Psyc_1520 Psychrobacter arcticus 273-4 peptidyl-prolyl isomerase YP_264802.1 1856615 D 259536 CDS YP_264803.1 71066076 3515482 1858467..1859558 1 NC_007204.1 NADH-dependent flavin oxidoreductase 1859558 3515482 Psyc_1521 Psychrobacter arcticus 273-4 NADH-dependent flavin oxidoreductase YP_264803.1 1858467 D 259536 CDS YP_264804.1 71066077 3515483 complement(1860238..1861356) 1 NC_007204.1 hypothetical protein 1861356 3515483 Psyc_1522 Psychrobacter arcticus 273-4 hypothetical protein YP_264804.1 1860238 R 259536 CDS YP_264805.1 71066078 3515484 1861826..1862959 1 NC_007204.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1862959 asd 3515484 asd Psychrobacter arcticus 273-4 aspartate-semialdehyde dehydrogenase YP_264805.1 1861826 D 259536 CDS YP_264806.1 71066079 3515485 1863438..1864589 1 NC_007204.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1864589 tgt 3515485 tgt Psychrobacter arcticus 273-4 queuine tRNA-ribosyltransferase YP_264806.1 1863438 D 259536 CDS YP_264807.1 71066080 3515486 complement(1864709..1866061) 1 NC_007204.1 sodium-dependent transporter 1866061 3515486 Psyc_1525 Psychrobacter arcticus 273-4 sodium-dependent transporter YP_264807.1 1864709 R 259536 CDS YP_264808.1 71066081 3515487 complement(1866370..1867149) 1 NC_007204.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1867149 lpxA 3515487 lpxA Psychrobacter arcticus 273-4 UDP-N-acetylglucosamine acyltransferase YP_264808.1 1866370 R 259536 CDS YP_264809.1 71066082 3515488 complement(1867326..1867835) 1 NC_007204.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1867835 fabZ 3515488 fabZ Psychrobacter arcticus 273-4 (3R)-hydroxymyristoyl-ACP dehydratase YP_264809.1 1867326 R 259536 CDS YP_264810.1 71066083 3515489 complement(1867949..1868986) 1 NC_007204.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1868986 lpxD 3515489 lpxD Psychrobacter arcticus 273-4 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_264810.1 1867949 R 259536 CDS YP_264811.1 71066084 3515490 complement(1869116..1871527) 1 NC_007204.1 surface antigen (D15) 1871527 3515490 Psyc_1529 Psychrobacter arcticus 273-4 surface antigen (D15) YP_264811.1 1869116 R 259536 CDS YP_264812.1 71066085 3515491 complement(1871791..1873164) 1 NC_007204.1 peptidase RseP 1873164 3515491 Psyc_1530 Psychrobacter arcticus 273-4 peptidase RseP YP_264812.1 1871791 R 259536 CDS YP_264813.1 71066086 3515492 complement(1873245..1874453) 1 NC_007204.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1874453 dxr 3515492 dxr Psychrobacter arcticus 273-4 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_264813.1 1873245 R 259536 CDS YP_264814.1 71066087 3515493 complement(1874705..1875514) 1 NC_007204.1 phosphatidate cytidylyltransferase 1875514 cdsA 3515493 cdsA Psychrobacter arcticus 273-4 phosphatidate cytidylyltransferase YP_264814.1 1874705 R 259536 CDS YP_264815.1 71066088 3515494 complement(1875645..1876403) 1 NC_007204.1 undecaprenyl pyrophosphate synthetase 1876403 uppS 3515494 uppS Psychrobacter arcticus 273-4 undecaprenyl pyrophosphate synthetase YP_264815.1 1875645 R 259536 CDS YP_264816.1 71066089 3515495 complement(1876646..1877200) 1 NC_007204.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1877200 frr 3515495 frr Psychrobacter arcticus 273-4 ribosome recycling factor YP_264816.1 1876646 R 259536 CDS YP_264817.1 71066090 3515496 complement(1877328..1878053) 1 NC_007204.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1878053 pyrH 3515496 pyrH Psychrobacter arcticus 273-4 uridylate kinase YP_264817.1 1877328 R 259536 CDS YP_264818.1 71066091 3515497 complement(1878243..1879820) 1 NC_007204.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 1879820 rimO 3515497 rimO Psychrobacter arcticus 273-4 ribosomal protein S12 methylthiotransferase YP_264818.1 1878243 R 259536 CDS YP_264819.1 71066092 3515498 1880091..1881479 1 NC_007204.1 Signal transduction histidine kinase sensor 1881479 ntrB 3515498 ntrB Psychrobacter arcticus 273-4 Signal transduction histidine kinase sensor YP_264819.1 1880091 D 259536 CDS YP_264820.1 71066093 3515499 1881521..1883260 1 NC_007204.1 probable nitrogen regulation; response regulator receiver protein 1883260 ntrC 3515499 ntrC Psychrobacter arcticus 273-4 response regulator receiver protein YP_264820.1 1881521 D 259536 CDS YP_264821.1 71066094 3515501 complement(1883793..1884785) 1 NC_007204.1 protein kinase:Serine/threonine protein kinase 1884785 ppkA 3515501 ppkA Psychrobacter arcticus 273-4 protein kinase:Serine/threonine protein kinase YP_264821.1 1883793 R 259536 CDS YP_264822.1 71066095 3515502 1884847..1885833 1 NC_007204.1 ATP binding P-loop; hypothetical protein 1885833 3515502 Psyc_1540 Psychrobacter arcticus 273-4 hypothetical protein YP_264822.1 1884847 D 259536 CDS YP_264823.1 71066096 3515503 complement(1885892..1886176) 1 NC_007204.1 predicted by generation, critica and glimmer, 4 base rbs; hypothetical protein 1886176 3515503 Psyc_1541 Psychrobacter arcticus 273-4 hypothetical protein YP_264823.1 1885892 R 259536 CDS YP_264824.1 71066097 3515504 complement(1886263..1886931) 1 NC_007204.1 glutathione S-transferase 1886931 3515504 Psyc_1542 Psychrobacter arcticus 273-4 glutathione S-transferase YP_264824.1 1886263 R 259536 CDS YP_264825.1 71066098 3515505 complement(1887387..1890179) 1 NC_007204.1 DNA gyrase is a type II topoisomerase that cleaves two strands of DNA and is ATP dependent.; DNA gyrase subunit A 1890179 gyrA 3515505 gyrA Psychrobacter arcticus 273-4 DNA gyrase subunit A YP_264825.1 1887387 R 259536 CDS YP_264826.1 71066099 3515506 1890707..1891594 1 NC_007204.1 methyltransferase 1891594 3515506 Psyc_1544 Psychrobacter arcticus 273-4 methyltransferase YP_264826.1 1890707 D 259536 CDS YP_264827.1 71066100 3515507 complement(1891773..1893020) 1 NC_007204.1 iron ABC transporter ATPase subunit 1893020 3515507 Psyc_1545 Psychrobacter arcticus 273-4 iron ABC transporter ATPase subunit YP_264827.1 1891773 R 259536 CDS YP_264828.1 71066101 3515508 complement(1893427..1895121) 1 NC_007204.1 iron ABC transporter inner membrane protein 1895121 3515508 Psyc_1546 Psychrobacter arcticus 273-4 iron ABC transporter inner membrane protein YP_264828.1 1893427 R 259536 CDS YP_264829.1 71066102 3515509 complement(1895175..1896299) 1 NC_007204.1 iron ABC transporter periplasmic binding protein 1896299 3515509 Psyc_1547 Psychrobacter arcticus 273-4 iron ABC transporter periplasmic binding protein YP_264829.1 1895175 R 259536 CDS YP_264830.1 71066103 3515510 complement(1896555..1897298) 1 NC_007204.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1897298 3515510 Psyc_1548 Psychrobacter arcticus 273-4 16S ribosomal RNA methyltransferase RsmE YP_264830.1 1896555 R 259536 CDS YP_264831.1 71066104 3515511 complement(1897307..1898875) 1 NC_007204.1 3-deoxy-D-manno-octulosonic-acid transferase 1898875 kdtA 3515511 kdtA Psychrobacter arcticus 273-4 3-deoxy-D-manno-octulosonic-acid transferase YP_264831.1 1897307 R 259536 CDS YP_264832.1 71066105 3515512 complement(1898998..1900293) 1 NC_007204.1 RBS found. Contains a Sel1-like repeat.; hypothetical protein 1900293 3515512 Psyc_1550 Psychrobacter arcticus 273-4 hypothetical protein YP_264832.1 1898998 R 259536 CDS YP_264833.1 71066106 3515513 complement(1900396..1902039) 1 NC_007204.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 1902039 cls 3515513 cls Psychrobacter arcticus 273-4 cardiolipin synthetase YP_264833.1 1900396 R 259536 CDS YP_264834.1 71066107 3515516 complement(1902885..1903472) 1 NC_007204.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 1903472 orn 3515516 orn Psychrobacter arcticus 273-4 oligoribonuclease YP_264834.1 1902885 R 259536 CDS YP_264835.1 71066108 3515517 1903694..1904797 1 NC_007204.1 sigma-54 interacting protein 1904797 3515517 Psyc_1553 Psychrobacter arcticus 273-4 sigma-54 interacting protein YP_264835.1 1903694 D 259536 CDS YP_264836.1 71066109 3515518 1904946..1905401 1 NC_007204.1 rhodanese-like sulfurtransferase 1905401 3515518 Psyc_1554 Psychrobacter arcticus 273-4 rhodanese-like sulfurtransferase YP_264836.1 1904946 D 259536 CDS YP_264837.1 71066110 3515519 1905668..1905931 1 NC_007204.1 glutaredoxin 1905931 3515519 Psyc_1555 Psychrobacter arcticus 273-4 glutaredoxin YP_264837.1 1905668 D 259536 CDS YP_264838.1 71066111 3515520 1906127..1906573 1 NC_007204.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 1906573 secB 3515520 secB Psychrobacter arcticus 273-4 preprotein translocase subunit SecB YP_264838.1 1906127 D 259536 CDS YP_264839.1 71066112 3515521 complement(1906919..1907575) 1 NC_007204.1 adenylate kinase 1907575 adk 3515521 adk Psychrobacter arcticus 273-4 adenylate kinase YP_264839.1 1906919 R 259536 CDS YP_264840.1 71066113 3515522 complement(1907795..1909075) 1 NC_007204.1 cytochrome c-type biogenesis protein 1909075 cycH 3515522 cycH Psychrobacter arcticus 273-4 cytochrome c-type biogenesis protein YP_264840.1 1907795 R 259536 CDS YP_264841.1 71066114 3515523 complement(1909072..1909650) 1 NC_007204.1 cytochrome C-type biogenesis protein 1909650 ccmH 3515523 ccmH Psychrobacter arcticus 273-4 cytochrome C-type biogenesis protein YP_264841.1 1909072 R 259536 CDS YP_264842.1 71066115 3515524 complement(1909647..1910297) 1 NC_007204.1 periplasmic protein thiol:disulfide oxidoreductase DsbE 1910297 dsbE 3515524 dsbE Psychrobacter arcticus 273-4 periplasmic protein thiol:disulfide oxidoreductase DsbE YP_264842.1 1909647 R 259536 CDS YP_264843.1 71066116 3515525 complement(1910299..1912344) 1 NC_007204.1 cytochrome c-type biogenesis protein 1912344 ccmF 3515525 ccmF Psychrobacter arcticus 273-4 cytochrome c-type biogenesis protein YP_264843.1 1910299 R 259536 CDS YP_264844.1 71066117 3515526 complement(1912583..1913917) 1 NC_007204.1 strong rbs. Predicted by glimmer, generation and critica. 4 transmembrane helices predicted.; hypothetical protein 1913917 3515526 Psyc_1562 Psychrobacter arcticus 273-4 hypothetical protein YP_264844.1 1912583 R 259536 CDS YP_264845.1 71066118 3515527 1914699..1916693 1 NC_007204.1 peptidoglycan glycosyltransferase 1916693 pb 3515527 pb Psychrobacter arcticus 273-4 peptidoglycan glycosyltransferase YP_264845.1 1914699 D 259536 CDS YP_264846.1 71066119 3515528 1916727..1917416 1 NC_007204.1 methyltransferase 1917416 3515528 Psyc_1564 Psychrobacter arcticus 273-4 methyltransferase YP_264846.1 1916727 D 259536 CDS YP_264847.1 71066120 3515529 1917628..1918056 1 NC_007204.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1918056 rplM 3515529 rplM Psychrobacter arcticus 273-4 50S ribosomal protein L13 YP_264847.1 1917628 D 259536 CDS YP_264848.1 71066121 3515530 1918067..1918453 1 NC_007204.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1918453 rpsI 3515530 rpsI Psychrobacter arcticus 273-4 30S ribosomal protein S9 YP_264848.1 1918067 D 259536 CDS YP_264849.1 71066122 3515531 1918735..1919826 1 NC_007204.1 lipid A biosynthesis acyltransferase 1919826 3515531 Psyc_1567 Psychrobacter arcticus 273-4 lipid A biosynthesis acyltransferase YP_264849.1 1918735 D 259536 CDS YP_264850.1 71066123 3515532 1919952..1921040 1 NC_007204.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1921040 trpS 3515532 trpS Psychrobacter arcticus 273-4 tryptophanyl-tRNA synthetase YP_264850.1 1919952 D 259536 CDS YP_264851.1 71066124 3515533 1921138..1922004 1 NC_007204.1 DUF173 domain; condensin subunit ScpA 1922004 3515533 Psyc_1569 Psychrobacter arcticus 273-4 condensin subunit ScpA YP_264851.1 1921138 D 259536 CDS YP_264852.1 71066125 3515534 1922067..1922618 1 NC_007204.1 condensin subunit ScpB 1922618 3515534 Psyc_1570 Psychrobacter arcticus 273-4 condensin subunit ScpB YP_264852.1 1922067 D 259536 CDS YP_264853.1 71066126 3515535 complement(1922898..1923599) 1 NC_007204.1 outer membrane lipoprotein carrier 1923599 lolA 3515535 lolA Psychrobacter arcticus 273-4 outer membrane lipoprotein carrier YP_264853.1 1922898 R 259536 CDS YP_264854.1 71066127 3515536 complement(1923962..1924219) 1 NC_007204.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1924219 rpmA 3515536 rpmA Psychrobacter arcticus 273-4 50S ribosomal protein L27 YP_264854.1 1923962 R 259536 CDS YP_264855.1 71066128 3515537 complement(1924311..1924622) 1 NC_007204.1 50S ribosomal protein L21 1924622 rplU 3515537 rplU Psychrobacter arcticus 273-4 50S ribosomal protein L21 YP_264855.1 1924311 R 259536 CDS YP_264856.1 71066129 3515538 1925313..1926362 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.677) with cleavage site probability 0.297 at residue 22; octaprenyl-diphosphate synthase 1926362 ispB 3515538 ispB Psychrobacter arcticus 273-4 octaprenyl-diphosphate synthase YP_264856.1 1925313 D 259536 CDS YP_264857.1 71066130 3515539 1927044..1928390 1 NC_007204.1 related to HlyD family; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.916) with cleavage site probability 0.676 at residue 22; RND membrane fusion protein AcrA 1928390 3515539 Psyc_1575 Psychrobacter arcticus 273-4 RND membrane fusion protein AcrA YP_264857.1 1927044 D 259536 CDS YP_264858.1 71066131 3515540 1928426..1931653 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.659) with cleavage site probability 0.413 at residue 30; RND superfmily multidrug/dye/detergent efflux pump AcrB 1931653 acrB 3515540 acrB Psychrobacter arcticus 273-4 RND superfmily multidrug/dye/detergent efflux pump AcrB YP_264858.1 1928426 D 259536 CDS YP_264859.1 71066132 3515541 1931653..1933473 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.990) with cleavage site probability 0.740 at residue 27; outer membrane efflux protein, OprM 1933473 oprM 3515541 oprM Psychrobacter arcticus 273-4 outer membrane efflux protein, OprM YP_264859.1 1931653 D 259536 CDS YP_264860.1 71066133 3515542 1933859..1934866 1 NC_007204.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1934866 hemB 3515542 hemB Psychrobacter arcticus 273-4 delta-aminolevulinic acid dehydratase YP_264860.1 1933859 D 259536 CDS YP_264861.1 71066134 3515543 complement(1935136..1936098) 1 NC_007204.1 IMP dehydrogenase 1936098 3515543 Psyc_1579 Psychrobacter arcticus 273-4 IMP dehydrogenase YP_264861.1 1935136 R 259536 CDS YP_264862.1 71066135 3515545 1936841..1937182 1 NC_007204.1 No RBS found.; hypothetical protein 1937182 3515545 Psyc_1580 Psychrobacter arcticus 273-4 hypothetical protein YP_264862.1 1936841 D 259536 CDS YP_264863.1 71066136 3515546 1937293..1937652 1 NC_007204.1 RBS found. SignalP detects one signal peptidase target sequence.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.760 at residue 23; hypothetical protein 1937652 3515546 Psyc_1581 Psychrobacter arcticus 273-4 hypothetical protein YP_264863.1 1937293 D 259536 CDS YP_264864.1 71066137 3515547 complement(1937839..1939161) 1 NC_007204.1 MFS Ni2+ efflux pump NreB 1939161 3515547 Psyc_1582 Psychrobacter arcticus 273-4 MFS Ni2+ efflux pump NreB YP_264864.1 1937839 R 259536 CDS YP_264865.1 71066138 3515548 complement(1939192..1939383) 1 NC_007204.1 NreA protein 1939383 3515548 Psyc_1583 Psychrobacter arcticus 273-4 NreA protein YP_264865.1 1939192 R 259536 CDS YP_264866.1 71066139 3515549 complement(1939623..1940021) 1 NC_007204.1 3 transmembrane helices, predicted by glimmer, critica and generation, 3 base rbs; hypothetical protein 1940021 3515549 Psyc_1584 Psychrobacter arcticus 273-4 hypothetical protein YP_264866.1 1939623 R 259536 CDS YP_264867.1 71066140 3515550 1940158..1940640 1 NC_007204.1 hypothetical protein 1940640 3515550 Psyc_1585 Psychrobacter arcticus 273-4 hypothetical protein YP_264867.1 1940158 D 259536 CDS YP_264868.1 71066141 3515551 complement(1940880..1941149) 1 NC_007204.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin-arginine translocation protein TatA 1941149 tatA 3515551 tatA Psychrobacter arcticus 273-4 twin-arginine translocation protein TatA YP_264868.1 1940880 R 259536 CDS YP_264869.1 71066142 3515552 complement(1941230..1943674) 1 NC_007204.1 copper/silver efflux P-type ATPase 1943674 3515552 Psyc_1587 Psychrobacter arcticus 273-4 copper/silver efflux P-type ATPase YP_264869.1 1941230 R 259536 CDS YP_264870.1 71066143 3515553 complement(1944334..1945083) 1 NC_007204.1 Beta-lactamase-like superfamily protein 1945083 3515553 Psyc_1588 Psychrobacter arcticus 273-4 Beta-lactamase-like superfamily protein YP_264870.1 1944334 R 259536 CDS YP_264871.1 71066144 3515554 complement(1945157..1945642) 1 NC_007204.1 RBS found. Contains three predicted transmembrane domains.; hypothetical protein 1945642 3515554 Psyc_1589 Psychrobacter arcticus 273-4 hypothetical protein YP_264871.1 1945157 R 259536 CDS YP_264872.1 71066145 3515555 complement(1945671..1946690) 1 NC_007204.1 copper-resistance protein CopB 1946690 copB 3515555 copB Psychrobacter arcticus 273-4 copper-resistance protein CopB YP_264872.1 1945671 R 259536 CDS YP_264873.1 71066146 3515556 complement(1946722..1948428) 1 NC_007204.1 copper-resistance protein CopA 1948428 copA 3515556 copA Psychrobacter arcticus 273-4 copper-resistance protein CopA YP_264873.1 1946722 R 259536 CDS YP_264874.1 71066147 3515557 complement(1948535..1949188) 1 NC_007204.1 hypothetical protein 1949188 3515557 Psyc_1592 Psychrobacter arcticus 273-4 hypothetical protein YP_264874.1 1948535 R 259536 CDS YP_264875.1 71066148 3515558 complement(1949517..1950155) 1 NC_007204.1 cytochrome c heme-binding site 1950155 3515558 Psyc_1593 Psychrobacter arcticus 273-4 cytochrome c heme-binding site YP_264875.1 1949517 R 259536 CDS YP_264876.1 71066149 3515559 complement(1950234..1950536) 1 NC_007204.1 Found an AGGA, around 11 nucleotides upstream of the initiation codon.; hypothetical protein 1950536 3515559 Psyc_1594 Psychrobacter arcticus 273-4 hypothetical protein YP_264876.1 1950234 R 259536 CDS YP_264877.1 71066150 3515560 complement(1950730..1951059) 1 NC_007204.1 predicted only by glimmer, 3 base rbs; hypothetical protein 1951059 3515560 Psyc_1595 Psychrobacter arcticus 273-4 hypothetical protein YP_264877.1 1950730 R 259536 CDS YP_264878.1 71066151 3515561 1951340..1952056 1 NC_007204.1 adjacent protein is histidine kinase; two component heavy metal response transcriptional regulator 1952056 3515561 Psyc_1596 Psychrobacter arcticus 273-4 two component heavy metal response transcriptional regulator YP_264878.1 1951340 D 259536 CDS YP_264879.1 71066152 3515562 1952058..1953545 1 NC_007204.1 contains 2 transmembrane domains, HAMP, ATP binding Histidine kinase A, N-terminal:Bacterial sensor protein, C-term domains; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.743) with cleavage site probability 0.664 at residue 28; signal transduction histidine kinase 1953545 3515562 Psyc_1597 Psychrobacter arcticus 273-4 signal transduction histidine kinase YP_264879.1 1952058 D 259536 CDS YP_264880.1 71066153 3515563 complement(1953960..1955129) 1 NC_007204.1 hlyD family secretion protein 1955129 3515563 Psyc_1598 Psychrobacter arcticus 273-4 hlyD family secretion protein YP_264880.1 1953960 R 259536 CDS YP_264881.1 71066154 3515564 complement(1955141..1957396) 1 NC_007204.1 drug efflux ABC transporter ATPase/inner membrane protein 1957396 3515564 Psyc_1599 Psychrobacter arcticus 273-4 drug efflux ABC transporter ATPase/inner membrane protein YP_264881.1 1955141 R 259536 CDS YP_264882.1 71066155 3515565 complement(1957402..1958946) 1 NC_007204.1 OMF family outer membrane efflux protein 1958946 3515565 Psyc_1600 Psychrobacter arcticus 273-4 OMF family outer membrane efflux protein YP_264882.1 1957402 R 259536 CDS YP_264883.1 71066156 3515566 complement(1959325..1979472) 1 NC_007204.1 hypothetical protein 1979472 3515566 Psyc_1601 Psychrobacter arcticus 273-4 hypothetical protein YP_264883.1 1959325 R 259536 CDS YP_264884.1 71066157 3515567 complement(1979536..1980258) 1 NC_007204.1 outer membrane protein OprF 1980258 3515567 Psyc_1602 Psychrobacter arcticus 273-4 outer membrane protein OprF YP_264884.1 1979536 R 259536 CDS YP_264885.1 71066158 3515568 1981057..1981335 1 NC_007204.1 RBS found; hypothetical protein 1981335 3515568 Psyc_1603 Psychrobacter arcticus 273-4 hypothetical protein YP_264885.1 1981057 D 259536 CDS YP_264886.1 71066159 3515569 1981427..1982449 1 NC_007204.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 1982449 3515569 Psyc_1604 Psychrobacter arcticus 273-4 D-cysteine desulfhydrase YP_264886.1 1981427 D 259536 CDS YP_264887.1 71066160 3515570 complement(1982738..1983283) 1 NC_007204.1 RBS found. SignalP predicts a signal peptidase target sequence.; hypothetical protein 1983283 3515570 Psyc_1605 Psychrobacter arcticus 273-4 hypothetical protein YP_264887.1 1982738 R 259536 CDS YP_264888.1 71066161 3515571 complement(1983299..1984000) 1 NC_007204.1 TrK family; K+ uptake transporter KtrA subunit 1984000 ktrA 3515571 ktrA Psychrobacter arcticus 273-4 K+ uptake transporter KtrA subunit YP_264888.1 1983299 R 259536 CDS YP_264889.1 71066162 3515572 complement(1984051..1985811) 1 NC_007204.1 Trk family of K+ tranporters; K+ uptake transporter KtrB subunit 1985811 ktrB 3515572 ktrB Psychrobacter arcticus 273-4 K+ uptake transporter KtrB subunit YP_264889.1 1984051 R 259536 CDS YP_264890.1 71066163 3515573 complement(1986060..1986548) 1 NC_007204.1 RBS found.; hypothetical protein 1986548 3515573 Psyc_1608 Psychrobacter arcticus 273-4 hypothetical protein YP_264890.1 1986060 R 259536 CDS YP_264891.1 71066164 3515575 1987131..1987460 1 NC_007204.1 No RBS found.; hypothetical protein 1987460 3515575 Psyc_1609 Psychrobacter arcticus 273-4 hypothetical protein YP_264891.1 1987131 D 259536 CDS YP_264892.1 71066165 3515577 complement(1988124..1989236) 1 NC_007204.1 gapA domain; glyceraldehyde 3-phosphate dehydrogenase family protein 1989236 gpdh 3515577 gpdh Psychrobacter arcticus 273-4 glyceraldehyde 3-phosphate dehydrogenase family protein YP_264892.1 1988124 R 259536 CDS YP_264893.1 71066166 3515578 complement(1989456..1991417) 1 NC_007204.1 DNA helicase: AAA ATPase 1991417 3515578 Psyc_1611 Psychrobacter arcticus 273-4 DNA helicase: AAA ATPase YP_264893.1 1989456 R 259536 CDS YP_264894.1 71066167 3515579 1991704..1993230 1 NC_007204.1 Chloroacetaldehyde is a possible substrate; aldehyde dehydrogenase 1993230 3515579 Psyc_1612 Psychrobacter arcticus 273-4 aldehyde dehydrogenase YP_264894.1 1991704 D 259536 CDS YP_264895.1 71066168 3515580 1993486..1993812 1 NC_007204.1 hypothetical protein 1993812 3515580 Psyc_1613 Psychrobacter arcticus 273-4 hypothetical protein YP_264895.1 1993486 D 259536 CDS YP_264896.1 71066169 3515581 1994034..1995677 1 NC_007204.1 glucose-methanol-choline oxidoreductase 1995677 3515581 Psyc_1614 Psychrobacter arcticus 273-4 glucose-methanol-choline oxidoreductase YP_264896.1 1994034 D 259536 CDS YP_264897.1 71066170 3515582 complement(1995727..1996716) 1 NC_007204.1 This protein contains a DNA binding Zn-finger domain associated with type I topoisomerase (COG0551, PF01396).; hypothetical protein 1996716 3515582 Psyc_1615 Psychrobacter arcticus 273-4 hypothetical protein YP_264897.1 1995727 R 259536 CDS YP_264898.1 71066171 3515583 complement(1996738..1997616) 1 NC_007204.1 RBS found.; hypothetical protein 1997616 3515583 Psyc_1616 Psychrobacter arcticus 273-4 hypothetical protein YP_264898.1 1996738 R 259536 CDS YP_264899.1 71066172 3515584 complement(1997966..1999963) 1 NC_007204.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1999963 tktA 3515584 tktA Psychrobacter arcticus 273-4 transketolase YP_264899.1 1997966 R 259536 CDS YP_264900.1 71066173 3515585 complement(2000255..2001538) 1 NC_007204.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2001538 serS 3515585 serS Psychrobacter arcticus 273-4 seryl-tRNA synthetase YP_264900.1 2000255 R 259536 CDS YP_264901.1 71066174 3515586 2001991..2002653 1 NC_007204.1 RBS found. Contains two predicted transmembrane domains.; hypothetical protein 2002653 3515586 Psyc_1619 Psychrobacter arcticus 273-4 hypothetical protein YP_264901.1 2001991 D 259536 CDS YP_264902.1 71066175 3515587 2002892..2003377 1 NC_007204.1 Citation: GRANT, R.A., FILMAN, D.J., FINKEL, S.E., KOLTER, R. AND HOGLE, J.M. The crystal structure of Dps, a ferritin homolog that bind; DNA-binding protein, Dps 2003377 3515587 Psyc_1620 Psychrobacter arcticus 273-4 DNA-binding protein, Dps YP_264902.1 2002892 D 259536 CDS YP_264903.1 71066176 3515588 complement(2003488..2004189) 1 NC_007204.1 1 transmembranne helix, signal P predicted cleavage site, predicted by glitter,generation and critica, good rbs; hypothetical protein 2004189 3515588 Psyc_1621 Psychrobacter arcticus 273-4 hypothetical protein YP_264903.1 2003488 R 259536 CDS YP_264904.1 71066177 3515589 complement(2004244..2005056) 1 NC_007204.1 regulatory inactivation of DnaA Hda protein 2005056 3515589 Psyc_1622 Psychrobacter arcticus 273-4 regulatory inactivation of DnaA Hda protein YP_264904.1 2004244 R 259536 CDS YP_264905.1 71066178 3515590 complement(2005468..2006571) 1 NC_007204.1 PerM family permease 2006571 3515590 Psyc_1623 Psychrobacter arcticus 273-4 PerM family permease YP_264905.1 2005468 R 259536 CDS YP_264906.1 71066179 3515591 2006924..2007973 1 NC_007204.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2007973 purM 3515591 purM Psychrobacter arcticus 273-4 phosphoribosylaminoimidazole synthetase YP_264906.1 2006924 D 259536 CDS YP_264907.1 71066180 3515592 2007973..2008695 1 NC_007204.1 phosphoribosylglycinamide formyltransferase 2008695 purN 3515592 purN Psychrobacter arcticus 273-4 phosphoribosylglycinamide formyltransferase YP_264907.1 2007973 D 259536 CDS YP_264908.1 71066181 3515593 complement(2008784..2009773) 1 NC_007204.1 LysR family transcriptional regulator 2009773 3515593 Psyc_1626 Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_264908.1 2008784 R 259536 CDS YP_264909.1 71066182 3515594 2010478..2012064 1 NC_007204.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 2012064 aceA 3515594 aceA Psychrobacter arcticus 273-4 isocitrate lyase YP_264909.1 2010478 D 259536 CDS YP_264910.1 71066183 3515595 2012323..2013879 1 NC_007204.1 adenylate cyclase 2013879 3515595 Psyc_1628 Psychrobacter arcticus 273-4 adenylate cyclase YP_264910.1 2012323 D 259536 CDS YP_264911.1 71066184 3515596 complement(2014149..2014670) 1 NC_007204.1 RBS found. Contains alignment to ErfK/YbiS/YcfS/YnhG domain HMM.; hypothetical protein 2014670 3515596 Psyc_1629 Psychrobacter arcticus 273-4 hypothetical protein YP_264911.1 2014149 R 259536 CDS YP_264912.1 71066185 3515597 2014805..2016067 1 NC_007204.1 One predicted transmembrane domain.; hypothetical protein 2016067 3515597 Psyc_1630 Psychrobacter arcticus 273-4 hypothetical protein YP_264912.1 2014805 D 259536 CDS YP_264913.1 71066186 3515598 complement(2016207..2017445) 1 NC_007204.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 2017445 argG 3515598 argG Psychrobacter arcticus 273-4 argininosuccinate synthase YP_264913.1 2016207 R 259536 CDS YP_264914.1 71066187 3515599 2017795..2018871 1 NC_007204.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2018871 pyrC 3515599 pyrC Psychrobacter arcticus 273-4 dihydroorotase YP_264914.1 2017795 D 259536 CDS YP_264915.1 71066188 3515600 2019038..2019757 1 NC_007204.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2019757 3515600 Psyc_1633 Psychrobacter arcticus 273-4 ribonuclease T YP_264915.1 2019038 D 259536 CDS YP_264916.1 71066189 3515602 complement(2020398..2021243) 1 NC_007204.1 nucleotidylyl transferase, pyrophosphorylase 2021243 3515602 Psyc_1634 Psychrobacter arcticus 273-4 nucleotidylyl transferase, pyrophosphorylase YP_264916.1 2020398 R 259536 CDS YP_264917.1 71066190 3515603 complement(2021356..2021664) 1 NC_007204.1 cell division protein FtsB 2021664 ftsB 3515603 ftsB Psychrobacter arcticus 273-4 cell division protein FtsB YP_264917.1 2021356 R 259536 CDS YP_264918.1 71066191 3515604 complement(2021756..2023072) 1 NC_007204.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2023072 eno 3515604 eno Psychrobacter arcticus 273-4 phosphopyruvate hydratase YP_264918.1 2021756 R 259536 CDS YP_264919.1 71066192 3515605 complement(2023393..2025753) 1 NC_007204.1 copper(heavy metal)-transporting P-type ATPase 2025753 3515605 Psyc_1637 Psychrobacter arcticus 273-4 copper(heavy metal)-transporting P-type ATPase YP_264919.1 2023393 R 259536 CDS YP_264920.1 71066193 3515606 complement(2026105..2026329) 1 NC_007204.1 MerP, periplasmic heavy metal binding/chaperone protein 2026329 merP 3515606 merP Psychrobacter arcticus 273-4 MerP, periplasmic heavy metal binding/chaperone protein YP_264920.1 2026105 R 259536 CDS YP_264921.1 71066194 3515607 complement(2026614..2026868) 1 NC_007204.1 RBS found; hypothetical protein 2026868 3515607 Psyc_1639 Psychrobacter arcticus 273-4 hypothetical protein YP_264921.1 2026614 R 259536 CDS YP_264922.1 71066195 3515608 complement(2026896..2027771) 1 NC_007204.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2027771 kdsA 3515608 kdsA Psychrobacter arcticus 273-4 2-dehydro-3-deoxyphosphooctonate aldolase YP_264922.1 2026896 R 259536 CDS YP_264923.1 71066196 3515609 complement(2028125..2029759) 1 NC_007204.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2029759 pyrG 3515609 pyrG Psychrobacter arcticus 273-4 CTP synthetase YP_264923.1 2028125 R 259536 CDS YP_264924.1 71066197 3515610 complement(2030108..2031205) 1 NC_007204.1 porin 2031205 ompN 3515610 ompN Psychrobacter arcticus 273-4 porin YP_264924.1 2030108 R 259536 CDS YP_264925.1 71066198 3515611 complement(2031762..2033966) 1 NC_007204.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 2033966 3515611 Psyc_1643 Psychrobacter arcticus 273-4 malate synthase G YP_264925.1 2031762 R 259536 CDS YP_264926.1 71066199 3515612 2034613..2035398 1 NC_007204.1 tRNA-(ms(2)io(6)a)-hydroxylase 2035398 3515612 Psyc_1644 Psychrobacter arcticus 273-4 tRNA-(ms(2)io(6)a)-hydroxylase YP_264926.1 2034613 D 259536 CDS YP_264927.1 71066200 3515613 complement(2035502..2036011) 1 NC_007204.1 RBS found; hypothetical protein 2036011 3515613 Psyc_1645 Psychrobacter arcticus 273-4 hypothetical protein YP_264927.1 2035502 R 259536 CDS YP_264928.1 71066201 3515614 complement(2036135..2036449) 1 NC_007204.1 RBS present, no alignments found; hypothetical protein 2036449 3515614 Psyc_1646 Psychrobacter arcticus 273-4 hypothetical protein YP_264928.1 2036135 R 259536 CDS YP_264929.1 71066202 3515615 complement(2036722..2039019) 1 NC_007204.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2039019 ppk 3515615 ppk Psychrobacter arcticus 273-4 polyphosphate kinase YP_264929.1 2036722 R 259536 CDS YP_264930.1 71066203 3515616 complement(2039183..2039869) 1 NC_007204.1 monofunctional biosynthetic peptidoglycan transglycosylase 2039869 3515616 Psyc_1648 Psychrobacter arcticus 273-4 monofunctional biosynthetic peptidoglycan transglycosylase YP_264930.1 2039183 R 259536 CDS YP_264931.1 71066204 3515617 2040143..2040451 1 NC_007204.1 hypothetical protein 2040451 3515617 Psyc_1649 Psychrobacter arcticus 273-4 hypothetical protein YP_264931.1 2040143 D 259536 CDS YP_264932.1 71066205 3515618 2040689..2042167 1 NC_007204.1 glycolate oxidase subunit D 2042167 glcD 3515618 glcD Psychrobacter arcticus 273-4 glycolate oxidase subunit D YP_264932.1 2040689 D 259536 CDS YP_264933.1 71066206 3515619 2042164..2043222 1 NC_007204.1 glycolate oxidase FAD binding subunit 2043222 glcE 3515619 glcE Psychrobacter arcticus 273-4 glycolate oxidase FAD binding subunit YP_264933.1 2042164 D 259536 CDS YP_264934.1 71066207 3515620 2043249..2044457 1 NC_007204.1 glycolate oxidase iron-sulfur subunit 2044457 glcF 3515620 glcF Psychrobacter arcticus 273-4 glycolate oxidase iron-sulfur subunit YP_264934.1 2043249 D 259536 CDS YP_264935.1 71066208 3515621 2044699..2046456 1 NC_007204.1 glycolate/L-lactate:H+ symporter 2046456 glcA 3515621 glcA Psychrobacter arcticus 273-4 glycolate/L-lactate:H+ symporter YP_264935.1 2044699 D 259536 CDS YP_264936.1 71066209 3515622 2046659..2047867 1 NC_007204.1 L-lactate dehydrogenase (cytochrome) 2047867 lldA 3515622 lldA Psychrobacter arcticus 273-4 L-lactate dehydrogenase (cytochrome) YP_264936.1 2046659 D 259536 CDS YP_264937.1 71066210 3515623 2047966..2049096 1 NC_007204.1 rhomboid family protein 2049096 3515623 Psyc_1655 Psychrobacter arcticus 273-4 rhomboid family protein YP_264937.1 2047966 D 259536 CDS YP_264938.1 71066211 3515624 2049196..2050008 1 NC_007204.1 Citation: J Biol Chem. 1999 Mar 5;274(10):6726-34.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.980 at residue 34; outer membrane protein/scaffolding protein MipA 2050008 3515624 Psyc_1656 Psychrobacter arcticus 273-4 outer membrane protein/scaffolding protein MipA YP_264938.1 2049196 D 259536 CDS YP_264939.1 71066212 3515625 complement(2050202..2051605) 1 NC_007204.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2051605 fumC 3515625 fumC Psychrobacter arcticus 273-4 fumarate hydratase YP_264939.1 2050202 R 259536 CDS YP_264940.1 71066213 3515626 2051749..2052441 1 NC_007204.1 5-formyltetrahydrofolate cyclo-ligase 2052441 3515626 Psyc_1658 Psychrobacter arcticus 273-4 5-formyltetrahydrofolate cyclo-ligase YP_264940.1 2051749 D 259536 CDS YP_264941.1 71066214 3515627 2052973..2055600 1 NC_007204.1 Lon-A peptidase 2055600 lon 3515627 lon Psychrobacter arcticus 273-4 Lon-A peptidase YP_264941.1 2052973 D 259536 CDS YP_264942.1 71066215 3515628 complement(2055885..2058563) 1 NC_007204.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2058563 topA 3515628 topA Psychrobacter arcticus 273-4 DNA topoisomerase I YP_264942.1 2055885 R 259536 CDS YP_264943.1 71066216 3515629 complement(2058843..2059439) 1 NC_007204.1 RBS present; hypothetical protein 2059439 3515629 Psyc_1661 Psychrobacter arcticus 273-4 hypothetical protein YP_264943.1 2058843 R 259536 CDS YP_264944.1 71066217 3515630 complement(2059781..2060182) 1 NC_007204.1 iopolymer transport protein ExbD/TolR 2060182 exbD 3515630 exbD Psychrobacter arcticus 273-4 iopolymer transport protein ExbD/TolR YP_264944.1 2059781 R 259536 CDS YP_264945.1 71066218 3515631 complement(2060190..2060771) 1 NC_007204.1 MotA/TolQ/ExbB proton channel 2060771 exbB 3515631 exbB Psychrobacter arcticus 273-4 MotA/TolQ/ExbB proton channel YP_264945.1 2060190 R 259536 CDS YP_264946.1 71066219 3515632 complement(2060877..2061890) 1 NC_007204.1 TonB/TolA energy transducing protein 2061890 tonB 3515632 tonB Psychrobacter arcticus 273-4 TonB/TolA energy transducing protein YP_264946.1 2060877 R 259536 CDS YP_264947.1 71066220 3515633 complement(2062387..2063052) 1 NC_007204.1 prenylation site indicates possible post- translational modification; TetR family transcriptional regulator 2063052 3515633 Psyc_1665 Psychrobacter arcticus 273-4 TetR family transcriptional regulator YP_264947.1 2062387 R 259536 CDS YP_264948.1 71066221 3515634 2063570..2063845 1 NC_007204.1 Trp operon repressor 2063845 3515634 Psyc_1666 Psychrobacter arcticus 273-4 Trp operon repressor YP_264948.1 2063570 D 259536 CDS YP_264949.1 71066222 3515635 2063912..2065330 1 NC_007204.1 anthranilate synthase, component I 2065330 trpE 3515635 trpE Psychrobacter arcticus 273-4 anthranilate synthase, component I YP_264949.1 2063912 D 259536 CDS YP_264950.1 71066223 3515636 2065363..2066010 1 NC_007204.1 anthranilate synthase, component II 2066010 3515636 Psyc_1668 Psychrobacter arcticus 273-4 anthranilate synthase, component II YP_264950.1 2065363 D 259536 CDS YP_264951.1 71066224 3515637 2066093..2066374 1 NC_007204.1 hypothetical protein 2066374 3515637 Psyc_1669 Psychrobacter arcticus 273-4 hypothetical protein YP_264951.1 2066093 D 259536 CDS YP_264952.1 71066225 3515638 complement(2066483..2067829) 1 NC_007204.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 2067829 dhe4 3515638 dhe4 Psychrobacter arcticus 273-4 glutamate dehydrogenase YP_264952.1 2066483 R 259536 CDS YP_264953.1 71066226 3515639 complement(2068135..2069265) 1 NC_007204.1 Zn-dependent alcohol dehydrogenase class III 2069265 adhC 3515639 adhC Psychrobacter arcticus 273-4 Zn-dependent alcohol dehydrogenase class III YP_264953.1 2068135 R 259536 CDS YP_264954.1 71066227 3515640 2069380..2070246 1 NC_007204.1 LysR family transcriptional regulator 2070246 3515640 Psyc_1672 Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_264954.1 2069380 D 259536 CDS YP_264955.1 71066228 3515641 2070339..2070857 1 NC_007204.1 Protein of unknown function DUF302; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.445 at residue 21; hypothetical protein 2070857 3515641 Psyc_1673 Psychrobacter arcticus 273-4 hypothetical protein YP_264955.1 2070339 D 259536 CDS YP_264956.1 71066229 3515642 complement(2070948..2073251) 1 NC_007204.1 it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases; transglutaminase-like superfamily protein 2073251 3515642 Psyc_1674 Psychrobacter arcticus 273-4 transglutaminase-like superfamily protein YP_264956.1 2070948 R 259536 CDS YP_264957.1 71066230 3515643 complement(2073248..2074309) 1 NC_007204.1 hypothetical protein 2074309 3515643 Psyc_1675 Psychrobacter arcticus 273-4 hypothetical protein YP_264957.1 2073248 R 259536 CDS YP_264958.1 71066231 3515644 complement(2074392..2075399) 1 NC_007204.1 methanol dehydrogenase regulatory protein 2075399 moxR 3515644 moxR Psychrobacter arcticus 273-4 methanol dehydrogenase regulatory protein YP_264958.1 2074392 R 259536 CDS YP_264959.1 71066232 3515645 complement(2075468..2075923) 1 NC_007204.1 cytochrome C2 2075923 3515645 Psyc_1677 Psychrobacter arcticus 273-4 cytochrome C2 YP_264959.1 2075468 R 259536 CDS YP_264960.1 71066233 3515646 complement(2076067..2078160) 1 NC_007204.1 diguanylate cyclase/phosphodiesterase 2078160 3515646 Psyc_1678 Psychrobacter arcticus 273-4 diguanylate cyclase/phosphodiesterase YP_264960.1 2076067 R 259536 CDS YP_264961.1 71066234 3515647 complement(2078442..2079449) 1 NC_007204.1 Also shares some significant alignments with the DUF160 family of conserved hypothetical proteins.; L-lysine 2,3-aminomutase 2079449 kamA 3515647 kamA Psychrobacter arcticus 273-4 L-lysine 2,3-aminomutase YP_264961.1 2078442 R 259536 CDS YP_264962.1 71066235 3515648 2079644..2080216 1 NC_007204.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2080216 efp 3515648 efp Psychrobacter arcticus 273-4 elongation factor P YP_264962.1 2079644 D 259536 CDS YP_264963.1 71066236 3515649 complement(2080446..2081336) 1 NC_007204.1 HesA/MoeB/ThiF family protein 2081336 3515649 Psyc_1681 Psychrobacter arcticus 273-4 HesA/MoeB/ThiF family protein YP_264963.1 2080446 R 259536 CDS YP_264964.1 71066237 3515650 complement(2081409..2082416) 1 NC_007204.1 Citation: Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T. 2000. TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export. J Biol Chem. 275:16717-16722; TatD family Mg-dependent DNase 2082416 3515650 Psyc_1682 Psychrobacter arcticus 273-4 TatD family Mg-dependent DNase YP_264964.1 2081409 R 259536 CDS YP_264965.1 71066238 3515651 complement(2082784..2083425) 1 NC_007204.1 single-strand binding protein 2083425 ssb 3515651 ssb Psychrobacter arcticus 273-4 single-strand binding protein YP_264965.1 2082784 R 259536 CDS YP_264966.1 71066239 3515652 complement(2083535..2084899) 1 NC_007204.1 sugar efflux MFS family transporter 2084899 3515652 Psyc_1684 Psychrobacter arcticus 273-4 sugar efflux MFS family transporter YP_264966.1 2083535 R 259536 CDS YP_264967.1 71066240 3515653 2085665..2088571 1 NC_007204.1 UvrA is a member of the ABC transporter superfamily of proteins. Except for UvrA proteins, all members of this family for which functions are known are involved in the transport of material through membranes.; excinuclease ABC subunit A 2088571 uvrA 3515653 uvrA Psychrobacter arcticus 273-4 excinuclease ABC subunit A YP_264967.1 2085665 D 259536 CDS YP_264968.1 71066241 3515654 complement(2088732..2089664) 1 NC_007204.1 RBS present, no alignment; hypothetical protein 2089664 3515654 Psyc_1686 Psychrobacter arcticus 273-4 hypothetical protein YP_264968.1 2088732 R 259536 CDS YP_264969.1 71066242 3515655 complement(2089744..2090562) 1 NC_007204.1 IS30 family transposase 2090562 3515655 Psyc_1687 Psychrobacter arcticus 273-4 IS30 family transposase YP_264969.1 2089744 R 259536 CDS YP_264970.1 71066243 3515656 complement(2090613..2090909) 1 NC_007204.1 IS3/IS911 family transposase OrfA 2090909 3515656 Psyc_1688 Psychrobacter arcticus 273-4 IS3/IS911 family transposase OrfA YP_264970.1 2090613 R 259536 CDS YP_264971.1 71066244 3515657 2091040..2092329 1 NC_007204.1 hypothetical protein 2092329 3515657 Psyc_1689 Psychrobacter arcticus 273-4 hypothetical protein YP_264971.1 2091040 D 259536 CDS YP_264972.1 71066245 3515658 complement(2092556..2092837) 1 NC_007204.1 Protein of unknown function DUF503; hypothetical protein 2092837 3515658 Psyc_1690 Psychrobacter arcticus 273-4 hypothetical protein YP_264972.1 2092556 R 259536 CDS YP_264973.1 71066246 3515659 2093001..2093804 1 NC_007204.1 Probably a conserved membrane protein: has 5 TM domains predicted; ThrE family exporter large subunit 2093804 3515659 Psyc_1691 Psychrobacter arcticus 273-4 ThrE family exporter large subunit YP_264973.1 2093001 D 259536 CDS YP_264974.1 71066247 3515660 2093806..2094258 1 NC_007204.1 ThrE family exporter small subunit 2094258 3515660 Psyc_1692 Psychrobacter arcticus 273-4 ThrE family exporter small subunit YP_264974.1 2093806 D 259536 CDS YP_264975.1 71066248 3515661 2094602..2095957 1 NC_007204.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 2095957 gor 3515661 gor Psychrobacter arcticus 273-4 glutathione reductase YP_264975.1 2094602 D 259536 CDS YP_264976.1 71066249 3515662 2096067..2096495 1 NC_007204.1 2 TM domains present; hypothetical protein 2096495 3515662 Psyc_1694 Psychrobacter arcticus 273-4 hypothetical protein YP_264976.1 2096067 D 259536 CDS YP_264977.1 71066250 3515663 complement(2096525..2097148) 1 NC_007204.1 acetyltransferase 2097148 3515663 Psyc_1695 Psychrobacter arcticus 273-4 acetyltransferase YP_264977.1 2096525 R 259536 CDS YP_264978.1 71066251 3515664 2097506..2098717 1 NC_007204.1 hypothetical protein 2098717 3515664 Psyc_1696 Psychrobacter arcticus 273-4 hypothetical protein YP_264978.1 2097506 D 259536 CDS YP_264979.1 71066252 3515665 complement(2099061..2099942) 1 NC_007204.1 PHP family metal-dependent phosphoesterase 2099942 3515665 Psyc_1697 Psychrobacter arcticus 273-4 PHP family metal-dependent phosphoesterase YP_264979.1 2099061 R 259536 CDS YP_264980.1 71066253 3515666 2100097..2100648 1 NC_007204.1 intracellular septation protein A 2100648 ispZ 3515666 ispZ Psychrobacter arcticus 273-4 intracellular septation protein A YP_264980.1 2100097 D 259536 CDS YP_264981.1 71066254 3515667 2100813..2101142 1 NC_007204.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; hypothetical protein 2101142 3515667 Psyc_1699 Psychrobacter arcticus 273-4 hypothetical protein YP_264981.1 2100813 D 259536 CDS YP_264982.1 71066255 3515668 2101139..2101624 1 NC_007204.1 2 TM domain and presence of a signal peptide; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.991 at residue 36; hypothetical protein 2101624 3515668 Psyc_1700 Psychrobacter arcticus 273-4 hypothetical protein YP_264982.1 2101139 D 259536 CDS YP_264983.1 71066256 3515669 2101722..2103812 1 NC_007204.1 hypothetical protein 2103812 3515669 Psyc_1701 Psychrobacter arcticus 273-4 hypothetical protein YP_264983.1 2101722 D 259536 CDS YP_264984.1 71066257 3515670 complement(2104087..2105010) 1 NC_007204.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 2105010 ubiA 3515670 ubiA Psychrobacter arcticus 273-4 4-hydroxybenzoate polyprenyltransferase YP_264984.1 2104087 R 259536 CDS YP_264985.1 71066258 3515671 complement(2105251..2105490) 1 NC_007204.1 1 TM domain predicted, RBS present, no alignments; hypothetical protein 2105490 3515671 Psyc_1703 Psychrobacter arcticus 273-4 hypothetical protein YP_264985.1 2105251 R 259536 CDS YP_264986.1 71066259 3515672 complement(2105531..2106421) 1 NC_007204.1 hypothetical protein 2106421 3515672 Psyc_1704 Psychrobacter arcticus 273-4 hypothetical protein YP_264986.1 2105531 R 259536 CDS YP_264987.1 71066260 3515673 complement(2106487..2107329) 1 NC_007204.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 2107329 bacA 3515673 bacA Psychrobacter arcticus 273-4 undecaprenyl pyrophosphate phosphatase YP_264987.1 2106487 R 259536 CDS YP_264988.1 71066261 3515674 complement(2107461..2108144) 1 NC_007204.1 metal (zinc) dependent glycoprotease 2108144 3515674 Psyc_1706 Psychrobacter arcticus 273-4 metal (zinc) dependent glycoprotease YP_264988.1 2107461 R 259536 CDS YP_264989.1 71066262 3515675 complement(2108357..2109892) 1 NC_007204.1 signal recognition particle subunit FFH/SRP54 (srp54) 2109892 ffh 3515675 ffh Psychrobacter arcticus 273-4 signal recognition particle subunit FFH/SRP54 (srp54) YP_264989.1 2108357 R 259536 CDS YP_264990.1 71066263 3515676 2110147..2110953 1 NC_007204.1 proposed to be related to ABC transporter permease domains, contains 8 TM domains; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.863) with cleavage site probability 0.282 at residue 17; hypothetical protein 2110953 3515676 Psyc_1708 Psychrobacter arcticus 273-4 hypothetical protein YP_264990.1 2110147 D 259536 CDS YP_264991.1 71066264 3515677 complement(2111001..2111369) 1 NC_007204.1 transposase 2111369 3515677 Psyc_1709 Psychrobacter arcticus 273-4 transposase YP_264991.1 2111001 R 259536 CDS YP_264992.1 71066265 3515678 2112006..2112242 1 NC_007204.1 required for 70S ribosome assembly; 50S ribosomal protein L28 2112242 rpmB 3515678 rpmB Psychrobacter arcticus 273-4 50S ribosomal protein L28 YP_264992.1 2112006 D 259536 CDS YP_264993.1 71066266 3515679 2112408..2112563 1 NC_007204.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2112563 rpmG 3515679 rpmG Psychrobacter arcticus 273-4 50S ribosomal protein L33 YP_264993.1 2112408 D 259536 CDS YP_264994.1 71066267 3515680 complement(2112789..2113100) 1 NC_007204.1 RBS present; hypothetical protein 2113100 3515680 Psyc_1712 Psychrobacter arcticus 273-4 hypothetical protein YP_264994.1 2112789 R 259536 CDS YP_264995.1 71066268 3515681 complement(2113302..2113610) 1 NC_007204.1 possible integral membrane protein, 4 TM domains; hypothetical protein 2113610 3515681 Psyc_1713 Psychrobacter arcticus 273-4 hypothetical protein YP_264995.1 2113302 R 259536 CDS YP_264996.1 71066269 3515682 complement(2113756..2114091) 1 NC_007204.1 possible integral membrane protein, 3 TM domains; hypothetical protein 2114091 3515682 Psyc_1714 Psychrobacter arcticus 273-4 hypothetical protein YP_264996.1 2113756 R 259536 CDS YP_264997.1 71066270 3515683 complement(2114190..2114879) 1 NC_007204.1 ribulose-5-phosphate 3-epimerase 2114879 rpe 3515683 rpe Psychrobacter arcticus 273-4 ribulose-5-phosphate 3-epimerase YP_264997.1 2114190 R 259536 CDS YP_264998.1 71066271 3515684 complement(2115058..2115537) 1 NC_007204.1 hypothetical protein 2115537 3515684 Psyc_1716 Psychrobacter arcticus 273-4 hypothetical protein YP_264998.1 2115058 R 259536 CDS YP_264999.1 71066272 3515685 complement(2115595..2116485) 1 NC_007204.1 Citation: S-formylglutathione hydrolase of Paracoccus denitrificans is homologous to human esterase D: a universal pathway for formaldehy; S-formylglutathione hydrolase 2116485 3515685 Psyc_1717 Psychrobacter arcticus 273-4 S-formylglutathione hydrolase YP_264999.1 2115595 R 259536 CDS YP_265000.1 71066273 3515686 complement(2116576..2117976) 1 NC_007204.1 hypothetical protein 2117976 3515686 Psyc_1718 Psychrobacter arcticus 273-4 hypothetical protein YP_265000.1 2116576 R 259536 CDS YP_265001.1 71066274 3515687 complement(2118369..2120339) 1 NC_007204.1 molecular chaperone; heat shock protein 90 2120339 htpG 3515687 htpG Psychrobacter arcticus 273-4 heat shock protein 90 YP_265001.1 2118369 R 259536 CDS YP_265002.1 71066275 3515688 complement(2120771..2121586) 1 NC_007204.1 hypothetical protein 2121586 3515688 Psyc_1720 Psychrobacter arcticus 273-4 hypothetical protein YP_265002.1 2120771 R 259536 CDS YP_265003.1 71066276 3515689 complement(2121751..2121996) 1 NC_007204.1 hypothetical protein 2121996 3515689 Psyc_1721 Psychrobacter arcticus 273-4 hypothetical protein YP_265003.1 2121751 R 259536 CDS YP_265004.1 71066277 3515690 complement(2122039..2122995) 1 NC_007204.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2122995 ispH 3515690 ispH Psychrobacter arcticus 273-4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_265004.1 2122039 R 259536 CDS YP_265005.1 71066278 3515691 2123321..2123947 1 NC_007204.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 2123947 gmk 3515691 gmk Psychrobacter arcticus 273-4 guanylate kinase YP_265005.1 2123321 D 259536 CDS YP_265006.1 71066279 3515692 2124134..2124394 1 NC_007204.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2124394 rpoZ 3515692 rpoZ Psychrobacter arcticus 273-4 DNA-directed RNA polymerase subunit omega YP_265006.1 2124134 D 259536 CDS YP_265007.1 71066280 3515693 2124740..2126926 1 NC_007204.1 no direct information on the functions of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.; Citation: Koonin E.V. , Grishin N.V. , Aravind L. , Wolf Y.I. Evolution of aminoacyl-tRNA synthetases--analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events. Genome Res. 9: 689- 710 (1999); guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 2126926 spoT 3515693 spoT Psychrobacter arcticus 273-4 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_265007.1 2124740 D 259536 CDS YP_265008.1 71066281 3515694 2127083..2127463 1 NC_007204.1 May also play a role in purine biosynthesis regulation.; Citation: J Bacteriol. 1999 Jun 15; 181(12): 3810-3815; endoribonuclease L-PSP 2127463 3515694 Psyc_1726 Psychrobacter arcticus 273-4 endoribonuclease L-PSP YP_265008.1 2127083 D 259536 CDS YP_265009.1 71066282 3515695 2127527..2129896 1 NC_007204.1 replication restart DNA helicase PriA 2129896 priA 3515695 priA Psychrobacter arcticus 273-4 replication restart DNA helicase PriA YP_265009.1 2127527 D 259536 CDS YP_265010.1 71066283 3515696 2130197..2130901 1 NC_007204.1 hypothetical protein 2130901 3515696 Psyc_1728 Psychrobacter arcticus 273-4 hypothetical protein YP_265010.1 2130197 D 259536 CDS YP_265011.1 71066284 3515697 2130976..2132862 1 NC_007204.1 glutathione-regulated K+ efflux antiporter 2132862 3515697 Psyc_1729 Psychrobacter arcticus 273-4 glutathione-regulated K+ efflux antiporter YP_265011.1 2130976 D 259536 CDS YP_265012.1 71066285 3515698 complement(2133052..2133981) 1 NC_007204.1 4 transmembrane helices; hypothetical protein 2133981 3515698 Psyc_1730 Psychrobacter arcticus 273-4 hypothetical protein YP_265012.1 2133052 R 259536 CDS YP_265013.1 71066286 3515699 2134203..2135024 1 NC_007204.1 tRNA (guanine-N(7)-)-methyltransferase 2135024 3515699 Psyc_1731 Psychrobacter arcticus 273-4 tRNA (guanine-N(7)-)-methyltransferase YP_265013.1 2134203 D 259536 CDS YP_265014.1 71066287 3515700 2136062..2137120 1 NC_007204.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2137120 recA 3515700 recA Psychrobacter arcticus 273-4 recombinase A YP_265014.1 2136062 D 259536 CDS YP_265015.1 71066288 3515701 2137298..2138419 1 NC_007204.1 Citation: Stohl,E.A., Brockman,J.P., Burkle,K.L., Morimatsu,K., Kowalczykowski,S.C. and Seifert,H.S. Escherichia coli RecX inhibits RecA; inhibitor/regulator of recA, recX 2138419 recX 3515701 recX Psychrobacter arcticus 273-4 inhibitor/regulator of recA, recX YP_265015.1 2137298 D 259536 CDS YP_265016.1 71066289 3515702 complement(2138488..2139036) 1 NC_007204.1 hypothetical protein 2139036 3515702 Psyc_1734 Psychrobacter arcticus 273-4 hypothetical protein YP_265016.1 2138488 R 259536 CDS YP_265017.1 71066290 3515703 complement(2139259..2139717) 1 NC_007204.1 2 transmembrane helices and signal peptide present; hypothetical protein 2139717 3515703 Psyc_1735 Psychrobacter arcticus 273-4 hypothetical protein YP_265017.1 2139259 R 259536 CDS YP_265018.1 71066291 3515704 complement(2139806..2140087) 1 NC_007204.1 hypothetical protein 2140087 3515704 Psyc_1736 Psychrobacter arcticus 273-4 hypothetical protein YP_265018.1 2139806 R 259536 CDS YP_265019.1 71066292 3515705 complement(2140246..2141142) 1 NC_007204.1 dihydropteroate synthase 2141142 folP 3515705 folP Psychrobacter arcticus 273-4 dihydropteroate synthase YP_265019.1 2140246 R 259536 CDS YP_265020.1 71066293 3515706 complement(2141297..2143183) 1 NC_007204.1 membrane protease FtsH catalytic subunit 2143183 ftsH 3515706 ftsH Psychrobacter arcticus 273-4 membrane protease FtsH catalytic subunit YP_265020.1 2141297 R 259536 CDS YP_265021.1 71066294 3515707 complement(2143595..2144227) 1 NC_007204.1 23S rRNA methylase, heat shock protein 2144227 ftsJ 3515707 ftsJ Psychrobacter arcticus 273-4 23S rRNA methylase, heat shock protein YP_265021.1 2143595 R 259536 CDS YP_265022.1 71066295 3515708 2144589..2144897 1 NC_007204.1 Possible RNA-binding protein containing KH domain; hypothetical protein 2144897 3515708 Psyc_1740 Psychrobacter arcticus 273-4 hypothetical protein YP_265022.1 2144589 D 259536 CDS YP_265023.1 71066296 3515709 2145112..2145873 1 NC_007204.1 hypothetical protein 2145873 3515709 Psyc_1741 Psychrobacter arcticus 273-4 hypothetical protein YP_265023.1 2145112 D 259536 CDS YP_265024.1 71066297 3515710 complement(2145972..2146700) 1 NC_007204.1 hypothetical protein 2146700 3515710 Psyc_1742 Psychrobacter arcticus 273-4 hypothetical protein YP_265024.1 2145972 R 259536 CDS YP_265025.1 71066298 3515711 2146968..2147483 1 NC_007204.1 hypothetical protein 2147483 3515711 Psyc_1743 Psychrobacter arcticus 273-4 hypothetical protein YP_265025.1 2146968 D 259536 CDS YP_265026.1 71066299 3515712 complement(2147782..2148744) 1 NC_007204.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2148744 lpxC 3515712 lpxC Psychrobacter arcticus 273-4 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_265026.1 2147782 R 259536 CDS YP_265027.1 71066300 3515713 complement(2149177..2150373) 1 NC_007204.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 2150373 ftsZ 3515713 ftsZ Psychrobacter arcticus 273-4 cell division protein FtsZ YP_265027.1 2149177 R 259536 CDS YP_265028.1 71066301 3515714 complement(2150619..2151959) 1 NC_007204.1 cell division protein FtsA 2151959 ftsA 3515714 ftsA Psychrobacter arcticus 273-4 cell division protein FtsA YP_265028.1 2150619 R 259536 CDS YP_265029.1 71066302 3515715 complement(2152064..2152891) 1 NC_007204.1 cell division protein FtsQ 2152891 ftsQ 3515715 ftsQ Psychrobacter arcticus 273-4 cell division protein FtsQ YP_265029.1 2152064 R 259536 CDS YP_265030.1 71066303 3515716 2153610..2154491 1 NC_007204.1 There are 9 addittional ORFs identical to this one.; IS4 family transposase 2154491 3515716 Psyc_1748 Psychrobacter arcticus 273-4 IS4 family transposase YP_265030.1 2153610 D 259536 CDS YP_265031.1 71066304 3515717 complement(2154516..2155616) 1 NC_007204.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 2155616 ddl 3515717 ddl Psychrobacter arcticus 273-4 D-alanine--D-alanine ligase YP_265031.1 2154516 R 259536 CDS YP_265032.1 71066305 3515718 complement(2155660..2157099) 1 NC_007204.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2157099 murC 3515718 murC Psychrobacter arcticus 273-4 UDP-N-acetylmuramate--L-alanine ligase YP_265032.1 2155660 R 259536 CDS YP_265033.1 71066306 3515719 complement(2157169..2158254) 1 NC_007204.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 2158254 murG 3515719 murG Psychrobacter arcticus 273-4 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_265033.1 2157169 R 259536 CDS YP_265034.1 71066307 3515720 complement(2158594..2159577) 1 NC_007204.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 2159577 gshB 3515720 gshB Psychrobacter arcticus 273-4 glutathione synthetase YP_265034.1 2158594 R 259536 CDS YP_265035.1 71066308 3515721 complement(2159685..2160389) 1 NC_007204.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 2160389 pyrE 3515721 pyrE Psychrobacter arcticus 273-4 orotate phosphoribosyltransferase YP_265035.1 2159685 R 259536 CDS YP_265036.1 71066309 3515722 complement(2160460..2161476) 1 NC_007204.1 hypothetical protein 2161476 3515722 Psyc_1754 Psychrobacter arcticus 273-4 hypothetical protein YP_265036.1 2160460 R 259536 CDS YP_265037.1 71066310 3515723 complement(2161706..2162545) 1 NC_007204.1 nucleoside-diphosphate-sugar epimerase 2162545 3515723 Psyc_1755 Psychrobacter arcticus 273-4 nucleoside-diphosphate-sugar epimerase YP_265037.1 2161706 R 259536 CDS YP_265038.1 71066311 3515724 complement(2162607..2164769) 1 NC_007204.1 hypothetical protein 2164769 3515724 Psyc_1756 Psychrobacter arcticus 273-4 hypothetical protein YP_265038.1 2162607 R 259536 CDS YP_265039.1 71066312 3515725 2164935..2165525 1 NC_007204.1 N-acetyl-anhydromuranmyl-L-alanine amidase 2165525 3515725 Psyc_1757 Psychrobacter arcticus 273-4 N-acetyl-anhydromuranmyl-L-alanine amidase YP_265039.1 2164935 D 259536 CDS YP_265040.1 71066313 3515726 2165674..2167224 1 NC_007204.1 Citation: Rikki N. Hvorup, Brit Winnen, Abraham B. Chang, Yong Jiang, Xiao-Feng Zhou, and Milton H. Saier, Jr The multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily Eur J Biochem 2003 270: 799-813.; MviN family virulence factor 2167224 mviN 3515726 mviN Psychrobacter arcticus 273-4 MviN family virulence factor YP_265040.1 2165674 D 259536 CDS YP_265041.1 71066314 3515727 2167347..2167967 1 NC_007204.1 hypothetical protein 2167967 3515727 Psyc_1759 Psychrobacter arcticus 273-4 hypothetical protein YP_265041.1 2167347 D 259536 CDS YP_265042.1 71066315 3515728 complement(2167992..2168642) 1 NC_007204.1 Citation: Bedford,D.J., Lewis,C.G. and Buttner,M.J. Characterization of a gene conferring bialaphos resistance in Streptomyces coelicolor A3(2) Gene 104 (1), 39-45 (1991); phosphinothricin acetyltransferase 2168642 3515728 Psyc_1760 Psychrobacter arcticus 273-4 phosphinothricin acetyltransferase YP_265042.1 2167992 R 259536 CDS YP_265043.1 71066316 3515729 2168899..2169942 1 NC_007204.1 riboflavin kinase/FMN adenylyltransferase 2169942 ribF 3515729 ribF Psychrobacter arcticus 273-4 riboflavin kinase/FMN adenylyltransferase YP_265043.1 2168899 D 259536 CDS YP_265044.1 71066317 3515730 complement(2170027..2170260) 1 NC_007204.1 hypothetical protein 2170260 3515730 Psyc_1762 Psychrobacter arcticus 273-4 hypothetical protein YP_265044.1 2170027 R 259536 CDS YP_265045.1 71066318 3515731 complement(2170547..2171536) 1 NC_007204.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 2171536 mdh 3515731 mdh Psychrobacter arcticus 273-4 malate dehydrogenase YP_265045.1 2170547 R 259536 CDS YP_265046.1 71066319 3515732 complement(2171938..2172564) 1 NC_007204.1 hypothetical protein 2172564 3515732 Psyc_1764 Psychrobacter arcticus 273-4 hypothetical protein YP_265046.1 2171938 R 259536 CDS YP_265047.1 71066320 3515733 complement(2173190..2175409) 1 NC_007204.1 soluble lytic murein transglycosylase 2175409 3515733 Psyc_1765 Psychrobacter arcticus 273-4 soluble lytic murein transglycosylase YP_265047.1 2173190 R 259536 CDS YP_265048.1 71066321 3515734 2175888..2177378 1 NC_007204.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2177378 miaB 3515734 miaB Psychrobacter arcticus 273-4 (dimethylallyl)adenosine tRNA methylthiotransferase YP_265048.1 2175888 D 259536 CDS YP_265049.1 71066322 3515735 complement(2177620..2178369) 1 NC_007204.1 RhtB family is also homologous to the LysE famliy of efflux proteins; homoserine/homoserine lactone efflux pump 2178369 3515735 Psyc_1767 Psychrobacter arcticus 273-4 homoserine/homoserine lactone efflux pump YP_265049.1 2177620 R 259536 CDS YP_265050.1 71066323 3515736 complement(2178476..2179714) 1 NC_007204.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 2179714 argE 3515736 argE Psychrobacter arcticus 273-4 acetylornithine deacetylase YP_265050.1 2178476 R 259536 CDS YP_265051.1 71066324 3515737 complement(2179986..2180639) 1 NC_007204.1 hypothetical protein 2180639 3515737 Psyc_1769 Psychrobacter arcticus 273-4 hypothetical protein YP_265051.1 2179986 R 259536 CDS YP_265052.1 71066325 3515738 2180879..2181322 1 NC_007204.1 hypothetical protein 2181322 3515738 Psyc_1770 Psychrobacter arcticus 273-4 hypothetical protein YP_265052.1 2180879 D 259536 CDS YP_265053.1 71066326 3515739 2181430..2181876 1 NC_007204.1 cell division protein ZapA 2181876 3515739 Psyc_1771 Psychrobacter arcticus 273-4 cell division protein ZapA YP_265053.1 2181430 D 259536 CDS YP_265054.1 71066327 3515740 complement(2182115..2182372) 1 NC_007204.1 hypothetical protein 2182372 3515740 Psyc_1772 Psychrobacter arcticus 273-4 hypothetical protein YP_265054.1 2182115 R 259536 CDS YP_265055.1 71066328 3515741 complement(2182547..2184640) 1 NC_007204.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 2184640 glyS 3515741 glyS Psychrobacter arcticus 273-4 glycyl-tRNA synthetase subunit beta YP_265055.1 2182547 R 259536 CDS YP_265056.1 71066329 3515742 complement(2184650..2185639) 1 NC_007204.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 2185639 glyQ 3515742 glyQ Psychrobacter arcticus 273-4 glycyl-tRNA synthetase subunit alpha YP_265056.1 2184650 R 259536 CDS YP_265057.1 71066330 3515743 complement(2186075..2186287) 1 NC_007204.1 Citation: Brissette JL, Weiner L, Ripmaster TL, Model P. Characterization and sequence of the Escherichia coli stress-induced psp operon. J Mol Biol. 1991 Jul 5;220(1):35-48; stress-responsive transcriptional regulator, PspC 2186287 3515743 Psyc_1775 Psychrobacter arcticus 273-4 stress-responsive transcriptional regulator, PspC YP_265057.1 2186075 R 259536 CDS YP_265058.1 71066331 3515744 2186824..2187276 1 NC_007204.1 2 TM domains; hypothetical protein 2187276 3515744 Psyc_1776 Psychrobacter arcticus 273-4 hypothetical protein YP_265058.1 2186824 D 259536 CDS YP_265059.1 71066332 3515745 complement(2187429..2188037) 1 NC_007204.1 hypothetical protein 2188037 3515745 Psyc_1777 Psychrobacter arcticus 273-4 hypothetical protein YP_265059.1 2187429 R 259536 CDS YP_265060.1 71066333 3515746 complement(2188547..2189413) 1 NC_007204.1 transposase OrfB 2189413 3515746 Psyc_1778 Psychrobacter arcticus 273-4 transposase OrfB YP_265060.1 2188547 R 259536 CDS YP_265061.1 71066334 3515747 complement(2189355..2189621) 1 NC_007204.1 IS3 family transposase 2189621 3515747 Psyc_1779 Psychrobacter arcticus 273-4 IS3 family transposase YP_265061.1 2189355 R 259536 CDS YP_265062.1 71066335 3515748 complement(2189763..2190659) 1 NC_007204.1 hypothetical protein 2190659 3515748 Psyc_1780 Psychrobacter arcticus 273-4 hypothetical protein YP_265062.1 2189763 R 259536 CDS YP_265063.1 71066336 3515749 complement(2190788..2193100) 1 NC_007204.1 heme-hemopexin-binding/utilization protein 2193100 3515749 Psyc_1781 Psychrobacter arcticus 273-4 heme-hemopexin-binding/utilization protein YP_265063.1 2190788 R 259536 CDS YP_265064.1 71066337 3515750 complement(2193166..2194830) 1 NC_007204.1 heme-hemopexin utilization protein B 2194830 3515750 Psyc_1782 Psychrobacter arcticus 273-4 heme-hemopexin utilization protein B YP_265064.1 2193166 R 259536 CDS YP_265065.1 71066338 3515752 2196414..2197226 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.601 at residue 30; zinc metallopeptidase 2197226 3515752 Psyc_1783 Psychrobacter arcticus 273-4 zinc metallopeptidase YP_265065.1 2196414 D 259536 CDS YP_265066.1 71066339 3515753 2197435..2197779 1 NC_007204.1 transcriptional regulator BolA 2197779 bolA 3515753 bolA Psychrobacter arcticus 273-4 transcriptional regulator BolA YP_265066.1 2197435 D 259536 CDS YP_265067.1 71066340 3515754 2197852..2198211 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.814) with cleavage site probability 0.283 at residue 29; hypothetical protein 2198211 3515754 Psyc_1785 Psychrobacter arcticus 273-4 hypothetical protein YP_265067.1 2197852 D 259536 CDS YP_265068.1 71066341 3515755 2198362..2198751 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.775 at residue 21; hypothetical protein 2198751 3515755 Psyc_1786 Psychrobacter arcticus 273-4 hypothetical protein YP_265068.1 2198362 D 259536 CDS YP_265069.1 71066342 3515756 2198848..2199366 1 NC_007204.1 IS3/IS911 family transposase orfA 2199366 3515756 Psyc_1787 Psychrobacter arcticus 273-4 IS3/IS911 family transposase orfA YP_265069.1 2198848 D 259536 CDS YP_265070.1 71066343 3515757 2199408..2200193 1 NC_007204.1 IS3 family transposase 2200193 3515757 Psyc_1788 Psychrobacter arcticus 273-4 IS3 family transposase YP_265070.1 2199408 D 259536 CDS YP_265071.1 71066344 3515758 complement(2200298..2200732) 1 NC_007204.1 thioredoxin 2200732 3515758 Psyc_1789 Psychrobacter arcticus 273-4 thioredoxin YP_265071.1 2200298 R 259536 CDS YP_265072.1 71066345 3515759 complement(2200907..2201779) 1 NC_007204.1 metallo-beta-lactamase superfamily protein 2201779 3515759 Psyc_1790 Psychrobacter arcticus 273-4 metallo-beta-lactamase superfamily protein YP_265072.1 2200907 R 259536 CDS YP_265073.1 71066346 3515760 2202140..2202430 1 NC_007204.1 ArsR family transcriptional regulator 2202430 3515760 Psyc_1791 Psychrobacter arcticus 273-4 ArsR family transcriptional regulator YP_265073.1 2202140 D 259536 CDS YP_265074.1 71066347 3515761 2202501..2204213 1 NC_007204.1 SulP family sulfate permease 2204213 3515761 Psyc_1792 Psychrobacter arcticus 273-4 SulP family sulfate permease YP_265074.1 2202501 D 259536 CDS YP_265075.1 71066348 3515762 2204392..2204718 1 NC_007204.1 hypothetical protein 2204718 3515762 Psyc_1793 Psychrobacter arcticus 273-4 hypothetical protein YP_265075.1 2204392 D 259536 CDS YP_265076.1 71066349 3515763 2204856..2205188 1 NC_007204.1 hypothetical protein 2205188 3515763 Psyc_1794 Psychrobacter arcticus 273-4 hypothetical protein YP_265076.1 2204856 D 259536 CDS YP_265077.1 71066350 3515764 complement(2205524..2207101) 1 NC_007204.1 alkyl hydroperoxide reductase 2207101 ahpF 3515764 ahpF Psychrobacter arcticus 273-4 alkyl hydroperoxide reductase YP_265077.1 2205524 R 259536 CDS YP_265078.1 71066351 3515765 2207771..2208019 1 NC_007204.1 hypothetical protein 2208019 3515765 Psyc_1796 Psychrobacter arcticus 273-4 hypothetical protein YP_265078.1 2207771 D 259536 CDS YP_265079.1 71066352 3515766 complement(2208259..2208825) 1 NC_007204.1 alkyl hydroperoxide reductase 2208825 ahpC 3515766 ahpC Psychrobacter arcticus 273-4 alkyl hydroperoxide reductase YP_265079.1 2208259 R 259536 CDS YP_265080.1 71066353 3515767 2209091..2209999 1 NC_007204.1 LysR family transcriptional regulator 2209999 3515767 Psyc_1798 Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_265080.1 2209091 D 259536 CDS YP_265081.1 71066354 3515768 complement(2210189..2210794) 1 NC_007204.1 thiopurine S-methyltransferase motif: ubiquinone biosynthesis; hypothetical protein 2210794 3515768 Psyc_1799 Psychrobacter arcticus 273-4 hypothetical protein YP_265081.1 2210189 R 259536 CDS YP_265082.1 71066355 3515769 complement(2210929..2211597) 1 NC_007204.1 DUF45, zinc metalloprotease motif - COG1451; hypothetical protein 2211597 3515769 Psyc_1800 Psychrobacter arcticus 273-4 hypothetical protein YP_265082.1 2210929 R 259536 CDS YP_265083.1 71066356 3515770 complement(2211599..2213191) 1 NC_007204.1 hypothetical protein 2213191 3515770 Psyc_1801 Psychrobacter arcticus 273-4 hypothetical protein YP_265083.1 2211599 R 259536 CDS YP_265084.1 71066357 3515771 complement(2213195..2214364) 1 NC_007204.1 hypothetical protein 2214364 3515771 Psyc_1802 Psychrobacter arcticus 273-4 hypothetical protein YP_265084.1 2213195 R 259536 CDS YP_265085.1 71066358 3515772 complement(2214478..2216166) 1 NC_007204.1 cytochrome c heme-binding motif; hypothetical protein 2216166 3515772 Psyc_1803 Psychrobacter arcticus 273-4 hypothetical protein YP_265085.1 2214478 R 259536 CDS YP_265086.1 71066359 3515773 complement(2216566..2218008) 1 NC_007204.1 possibly iron regulated; imelysin 2218008 3515773 Psyc_1804 Psychrobacter arcticus 273-4 imelysin YP_265086.1 2216566 R 259536 CDS YP_265087.1 71066360 3515774 complement(2218442..2219095) 1 NC_007204.1 OmpA/OmpF family outer membrane protein 2219095 3515774 Psyc_1805 Psychrobacter arcticus 273-4 OmpA/OmpF family outer membrane protein YP_265087.1 2218442 R 259536 CDS YP_265088.1 71066361 3515775 2219610..2219813 1 NC_007204.1 hypothetical protein 2219813 3515775 Psyc_1806 Psychrobacter arcticus 273-4 hypothetical protein YP_265088.1 2219610 D 259536 CDS YP_265089.1 71066362 3515776 2219995..2221110 1 NC_007204.1 3 transmembrane helices; hypothetical protein 2221110 3515776 Psyc_1807 Psychrobacter arcticus 273-4 hypothetical protein YP_265089.1 2219995 D 259536 CDS YP_265090.1 71066363 3515777 2221188..2222066 1 NC_007204.1 septum site-determining protein MinC 2222066 minC 3515777 minC Psychrobacter arcticus 273-4 septum site-determining protein MinC YP_265090.1 2221188 D 259536 CDS YP_265091.1 71066364 3515778 2222688..2223500 1 NC_007204.1 septum site-determining protein MinD 2223500 minD 3515778 minD Psychrobacter arcticus 273-4 septum site-determining protein MinD YP_265091.1 2222688 D 259536 CDS YP_265092.1 71066365 3515779 2223503..2223793 1 NC_007204.1 cell division topological specificity factor MinE 2223793 minE 3515779 minE Psychrobacter arcticus 273-4 cell division topological specificity factor MinE YP_265092.1 2223503 D 259536 CDS YP_265093.1 71066366 3515780 complement(2224089..2224616) 1 NC_007204.1 nickel-dependent hydrogenase b561-type cytochrome subunit 2224616 hybC 3515780 hybC Psychrobacter arcticus 273-4 nickel-dependent hydrogenase b561-type cytochrome subunit YP_265093.1 2224089 R 259536 CDS YP_265094.1 71066367 3515781 complement(2224820..2225317) 1 NC_007204.1 hypothetical protein 2225317 3515781 Psyc_1812 Psychrobacter arcticus 273-4 hypothetical protein YP_265094.1 2224820 R 259536 CDS YP_265095.1 71066368 3515782 complement(2225363..2232217) 1 NC_007204.1 hybrid two-component sensor and regulatory protein 2232217 3515782 Psyc_1813 Psychrobacter arcticus 273-4 hybrid two-component sensor and regulatory protein YP_265095.1 2225363 R 259536 CDS YP_265096.1 71066369 3515783 complement(2232248..2233150) 1 NC_007204.1 adjacent to histidine kinase and response regulator pilH and pilI; chemotaxis protein CheR 2233150 pilK 3515783 pilK Psychrobacter arcticus 273-4 chemotaxis protein CheR YP_265096.1 2232248 R 259536 CDS YP_265097.1 71066370 3515784 complement(2233360..2234787) 1 NC_007204.1 pilI and pilH like genes upstream act os histidine kinases necessary for activity of complex; chemotaxis sensory transducer protein 2234787 pilJ 3515784 pilJ Psychrobacter arcticus 273-4 chemotaxis sensory transducer protein YP_265097.1 2233360 R 259536 CDS YP_265098.1 71066371 3515785 complement(2234982..2235512) 1 NC_007204.1 adjacent to pilH- like response regulator; type IV pili signal transducer 2235512 pilI 3515785 pilI Psychrobacter arcticus 273-4 type IV pili signal transducer YP_265098.1 2234982 R 259536 CDS YP_265099.1 71066372 3515786 complement(2235516..2235878) 1 NC_007204.1 adjacent to sensor component; two-component response regulator 2235878 pilH 3515786 pilH Psychrobacter arcticus 273-4 two-component response regulator YP_265099.1 2235516 R 259536 CDS YP_265100.1 71066373 3515787 complement(2236056..2236433) 1 NC_007204.1 response regulator domain only; two component reponse regulator 2236433 pilG 3515787 pilG Psychrobacter arcticus 273-4 two component reponse regulator YP_265100.1 2236056 R 259536 CDS YP_265101.1 71066374 3515788 2237312..2238430 1 NC_007204.1 hypothetical protein 2238430 3515788 Psyc_1819 Psychrobacter arcticus 273-4 hypothetical protein YP_265101.1 2237312 D 259536 CDS YP_265102.1 71066375 3515789 2238714..2239436 1 NC_007204.1 two component transcriptional regulator 2239436 3515789 Psyc_1820 Psychrobacter arcticus 273-4 two component transcriptional regulator YP_265102.1 2238714 D 259536 CDS YP_265103.1 71066376 3515790 2239574..2241685 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.992) with cleavage site probability 0.729 at residue 28; signal transduction histidine kinase sensor 2241685 3515790 Psyc_1821 Psychrobacter arcticus 273-4 signal transduction histidine kinase sensor YP_265103.1 2239574 D 259536 CDS YP_265104.1 71066377 3515791 2242000..2242770 1 NC_007204.1 Citation: J Bacteriol. 2002 Sep;184(17):4930-2; methionine ABC transporter ATPase subunit MetN 2242770 metN 3515791 metN Psychrobacter arcticus 273-4 methionine ABC transporter ATPase subunit MetN YP_265104.1 2242000 D 259536 CDS YP_265105.1 71066378 3515792 2242790..2243476 1 NC_007204.1 Citation: J Bacteriol. 2002 Sep;184(17):4930-2; methionine ABC transporter ATPase subunit MetI 2243476 metI 3515792 metI Psychrobacter arcticus 273-4 methionine ABC transporter ATPase subunit MetI YP_265105.1 2242790 D 259536 CDS YP_265106.1 71066379 3515793 2243744..2244697 1 NC_007204.1 Citation: J Bacteriol. 2002 Sep;184(17):4930-2; methionine ABC transporter periplasmic solute binding protein metQ 2244697 metQ 3515793 metQ Psychrobacter arcticus 273-4 methionine ABC transporter periplasmic solute binding protein metQ YP_265106.1 2243744 D 259536 CDS YP_265107.1 71066380 3515794 complement(2244850..2245350) 1 NC_007204.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 2245350 ccmE 3515794 ccmE Psychrobacter arcticus 273-4 cytochrome c-type biogenesis protein CcmE YP_265107.1 2244850 R 259536 CDS YP_265108.1 71066381 3515795 complement(2245590..2245814) 1 NC_007204.1 Citation: Proc. Natl. Acad. Sci. USA 96: 6462-6467, 1999; cytochrome c biogenesis protein, CcmD 2245814 ccmD 3515795 ccmD Psychrobacter arcticus 273-4 cytochrome c biogenesis protein, CcmD YP_265108.1 2245590 R 259536 CDS YP_265109.1 71066382 3515796 complement(2245847..2246635) 1 NC_007204.1 Citation: Proc. Natl. Acad. Sci. USA 96: 6462-6467, 1999; heme exporter, subunit CcmC 2246635 ccmC 3515796 ccmC Psychrobacter arcticus 273-4 heme exporter, subunit CcmC YP_265109.1 2245847 R 259536 CDS YP_265110.1 71066383 3515797 complement(2246866..2247603) 1 NC_007204.1 Citation: Proc. Natl. Acad. Sci. USA 96: 6462-6467, 1999; ABC transporter inner membrane protein CcmB 2247603 ccmB 3515797 ccmB Psychrobacter arcticus 273-4 ABC transporter inner membrane protein CcmB YP_265110.1 2246866 R 259536 CDS YP_265111.1 71066384 3515798 complement(2247671..2248300) 1 NC_007204.1 Citation: Proc. Natl. Acad. Sci. USA 96: 6462-6467, 1999; ABC transporter ATPase subunit CcmA 2248300 ccmA 3515798 ccmA Psychrobacter arcticus 273-4 ABC transporter ATPase subunit CcmA YP_265111.1 2247671 R 259536 CDS YP_265112.1 71066385 3515799 2248417..2249469 1 NC_007204.1 hypothetical protein 2249469 3515799 Psyc_1830 Psychrobacter arcticus 273-4 hypothetical protein YP_265112.1 2248417 D 259536 CDS YP_265113.1 71066386 3515800 2249651..2250052 1 NC_007204.1 -protein is only 100 aa, all best hits are 300+ aa; hypothetical protein 2250052 3515800 Psyc_1831 Psychrobacter arcticus 273-4 hypothetical protein YP_265113.1 2249651 D 259536 CDS YP_265114.1 71066387 3515801 complement(2249987..2250760) 1 NC_007204.1 DUF81, 7 transmembrane helices; hypothetical protein 2250760 3515801 Psyc_1832 Psychrobacter arcticus 273-4 hypothetical protein YP_265114.1 2249987 R 259536 CDS YP_265115.1 71066388 3515802 complement(2251041..2252426) 1 NC_007204.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2252426 dfp 3515802 dfp Psychrobacter arcticus 273-4 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_265115.1 2251041 R 259536 CDS YP_265116.1 71066389 3515803 2252545..2253228 1 NC_007204.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2253228 radC 3515803 radC Psychrobacter arcticus 273-4 DNA repair protein RadC YP_265116.1 2252545 D 259536 CDS YP_265117.1 71066390 3515804 2253553..2256537 1 NC_007204.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2256537 fadE 3515804 fadE Psychrobacter arcticus 273-4 acyl-CoA dehydrogenase YP_265117.1 2253553 D 259536 CDS YP_265118.1 71066391 3515805 2256923..2258296 1 NC_007204.1 8 transmembrane helices identified by tmhmm; sodium/proton:dicarboxylate (glutamate) symporter 2258296 gltP 3515805 gltP Psychrobacter arcticus 273-4 sodium/proton:dicarboxylate (glutamate) symporter YP_265118.1 2256923 D 259536 CDS YP_265119.1 71066392 3515806 complement(2258449..2259204) 1 NC_007204.1 DUF81, 5 transmembrane helices; hypothetical protein 2259204 3515806 Psyc_1837 Psychrobacter arcticus 273-4 hypothetical protein YP_265119.1 2258449 R 259536 CDS YP_265120.1 71066393 3515807 2259774..2260976 1 NC_007204.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 2260976 nhaA 3515807 nhaA Psychrobacter arcticus 273-4 pH-dependent sodium/proton antiporter YP_265120.1 2259774 D 259536 CDS YP_265121.1 71066394 3515808 2261314..2262678 1 NC_007204.1 1 transmembrane helix; hypothetical protein 2262678 3515808 Psyc_1839 Psychrobacter arcticus 273-4 hypothetical protein YP_265121.1 2261314 D 259536 CDS YP_265122.1 71066395 3515809 complement(2262931..2263668) 1 NC_007204.1 MutT/nudix family protein 2263668 3515809 Psyc_1840 Psychrobacter arcticus 273-4 MutT/nudix family protein YP_265122.1 2262931 R 259536 CDS YP_265123.1 71066396 3515810 2264325..2264888 1 NC_007204.1 Possible protein from MutT/nudix family; hypothetical protein 2264888 3515810 Psyc_1841 Psychrobacter arcticus 273-4 hypothetical protein YP_265123.1 2264325 D 259536 CDS YP_265124.1 71066397 3515811 complement(2265219..2268293) 1 NC_007204.1 peptidase M16 family 2268293 3515811 Psyc_1842 Psychrobacter arcticus 273-4 peptidase M16 family YP_265124.1 2265219 R 259536 CDS YP_265125.1 71066398 3515812 2268611..2269072 1 NC_007204.1 Has an USP domain; universal stress protein 2269072 3515812 Psyc_1843 Psychrobacter arcticus 273-4 universal stress protein YP_265125.1 2268611 D 259536 CDS YP_265126.1 71066399 3515813 complement(2269252..2270187) 1 NC_007204.1 All possess a potential HTH DNA-binding motif towards their N-termini.; LysR family transcriptional regulator 2270187 3515813 Psyc_1844 Psychrobacter arcticus 273-4 LysR family transcriptional regulator YP_265126.1 2269252 R 259536 CDS YP_265127.1 71066400 3515814 2270430..2271512 1 NC_007204.1 10 TM domains and a signal peptide predicted: Possible membrane protein; hypothetical protein 2271512 3515814 Psyc_1845 Psychrobacter arcticus 273-4 hypothetical protein YP_265127.1 2270430 D 259536 CDS YP_265128.1 71066401 3515815 complement(2271782..2271991) 1 NC_007204.1 universal stress protein; Citation: Sand O, et al. Microbiology. 2003 Aug;149(Pt 8):2107-17. PMID: 12904550 2: Phadtare S, et al. J Biol Chem. 2002 Mar 1;277(9):7239-45. Epub 2001 Dec 27. PMID: 11756430 Phadadtare S, Inouye M. J. Bacteriol. 2001 Feb;183(4):1205-14. PMID: 1115793; cold-shock DNA-binding protein family protein 2271991 3515815 Psyc_1846 Psychrobacter arcticus 273-4 cold-shock DNA-binding protein family protein YP_265128.1 2271782 R 259536 CDS YP_265129.1 71066402 3515816 complement(2272237..2272659) 1 NC_007204.1 DUF454, 3 transmembrane helices; hypothetical protein 2272659 3515816 Psyc_1847 Psychrobacter arcticus 273-4 hypothetical protein YP_265129.1 2272237 R 259536 CDS YP_265130.1 71066403 3515817 complement(2272826..2273185) 1 NC_007204.1 Found weak RBS, no alignments; hypothetical protein 2273185 3515817 Psyc_1848 Psychrobacter arcticus 273-4 hypothetical protein YP_265130.1 2272826 R 259536 CDS YP_265131.1 71066404 3515818 complement(2273303..2275093) 1 NC_007204.1 2 transmembrane helices; hypothetical protein 2275093 3515818 Psyc_1849 Psychrobacter arcticus 273-4 hypothetical protein YP_265131.1 2273303 R 259536 CDS YP_265132.1 71066405 3515819 complement(2275303..2278257) 1 NC_007204.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2278257 valS 3515819 valS Psychrobacter arcticus 273-4 valyl-tRNA synthetase YP_265132.1 2275303 R 259536 CDS YP_265133.1 71066406 3515820 2278623..2279663 1 NC_007204.1 formate/nitrate transporter 2279663 3515820 Psyc_1851 Psychrobacter arcticus 273-4 formate/nitrate transporter YP_265133.1 2278623 D 259536 CDS YP_265134.1 71066407 3515821 complement(2279660..2280139) 1 NC_007204.1 DUF74; hypothetical protein 2280139 3515821 Psyc_1852 Psychrobacter arcticus 273-4 hypothetical protein YP_265134.1 2279660 R 259536 CDS YP_265135.1 71066408 3515822 complement(2280191..2280667) 1 NC_007204.1 DUF74; hypothetical protein 2280667 3515822 Psyc_1853 Psychrobacter arcticus 273-4 hypothetical protein YP_265135.1 2280191 R 259536 CDS YP_265136.1 71066409 3515823 complement(2280830..2281387) 1 NC_007204.1 hypothetical protein 2281387 3515823 Psyc_1854 Psychrobacter arcticus 273-4 hypothetical protein YP_265136.1 2280830 R 259536 CDS YP_265137.1 71066410 3515824 complement(2281755..2281991) 1 NC_007204.1 Found RBS, no alignment obtained; hypothetical protein 2281991 3515824 Psyc_1855 Psychrobacter arcticus 273-4 hypothetical protein YP_265137.1 2281755 R 259536 CDS YP_265138.1 71066411 3515825 complement(2282186..2283727) 1 NC_007204.1 Found RBS, 2 membrane helices found (POSSIBLE N-term signal sequence from TMHMM).; hypothetical protein 2283727 3515825 Psyc_1856 Psychrobacter arcticus 273-4 hypothetical protein YP_265138.1 2282186 R 259536 CDS YP_265139.1 71066412 3515826 2284175..2285377 1 NC_007204.1 This orf contains no alignments to the ACT domain.; phosphoserine phosphatase 2285377 serB 3515826 serB Psychrobacter arcticus 273-4 phosphoserine phosphatase YP_265139.1 2284175 D 259536 CDS YP_265140.1 71066413 3515827 2285686..2286711 1 NC_007204.1 Possible membrane protein: 7 transmembrane helices; hypothetical protein 2286711 3515827 Psyc_1858 Psychrobacter arcticus 273-4 hypothetical protein YP_265140.1 2285686 D 259536 CDS YP_265141.1 71066414 3515828 2287102..2287491 1 NC_007204.1 hypothetical protein 2287491 3515828 Psyc_1859 Psychrobacter arcticus 273-4 hypothetical protein YP_265141.1 2287102 D 259536 CDS YP_265142.1 71066415 3515829 2287667..2288173 1 NC_007204.1 hypothetical protein 2288173 3515829 Psyc_1860 Psychrobacter arcticus 273-4 hypothetical protein YP_265142.1 2287667 D 259536 CDS YP_265143.1 71066416 3515830 2288383..2289519 1 NC_007204.1 biotin synthase 2289519 bioB 3515830 bioB Psychrobacter arcticus 273-4 biotin synthase YP_265143.1 2288383 D 259536 CDS YP_265144.1 71066417 3515831 2289611..2290045 1 NC_007204.1 Possible membrane protein: 4 TM domains; hypothetical protein 2290045 3515831 Psyc_1862 Psychrobacter arcticus 273-4 hypothetical protein YP_265144.1 2289611 D 259536 CDS YP_265145.1 71066418 3515832 complement(2290156..2290980) 1 NC_007204.1 Found RBS, no alignment, found a signal peptide; hypothetical protein 2290980 3515832 Psyc_1863 Psychrobacter arcticus 273-4 hypothetical protein YP_265145.1 2290156 R 259536 CDS YP_265146.1 71066419 3515833 complement(2291162..2291653) 1 NC_007204.1 2 transmembrane helices; hypothetical protein 2291653 3515833 Psyc_1864 Psychrobacter arcticus 273-4 hypothetical protein YP_265146.1 2291162 R 259536 CDS YP_265147.1 71066420 3515834 complement(2291836..2292552) 1 NC_007204.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 2292552 rph 3515834 rph Psychrobacter arcticus 273-4 ribonuclease PH YP_265147.1 2291836 R 259536 CDS YP_265148.1 71066421 3515835 complement(2292913..2294697) 1 NC_007204.1 -adjacent gene has same function or1224; long-chain fatty acid CoA ligase (AMP-binding) 2294697 3515835 Psyc_1866 Psychrobacter arcticus 273-4 long-chain fatty acid CoA ligase (AMP-binding) YP_265148.1 2292913 R 259536 CDS YP_265149.1 71066422 3515836 complement(2295403..2297130) 1 NC_007204.1 long-chain fatty acid CoA ligase (AMP-binding) 2297130 fadD 3515836 fadD Psychrobacter arcticus 273-4 long-chain fatty acid CoA ligase (AMP-binding) YP_265149.1 2295403 R 259536 CDS YP_265150.1 71066423 3515837 2297852..2300170 1 NC_007204.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2300170 parC 3515837 parC Psychrobacter arcticus 273-4 DNA topoisomerase IV subunit A YP_265150.1 2297852 D 259536 CDS YP_265151.1 71066424 3515838 2300167..2301174 1 NC_007204.1 hypothetical protein 2301174 3515838 Psyc_1869 Psychrobacter arcticus 273-4 hypothetical protein YP_265151.1 2300167 D 259536 CDS YP_265152.1 71066425 3515839 2301288..2302085 1 NC_007204.1 Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars.; class II-B haloacid dehalogenase 2302085 cof 3515839 cof Psychrobacter arcticus 273-4 class II-B haloacid dehalogenase YP_265152.1 2301288 D 259536 CDS YP_265153.1 71066426 3515840 complement(2302590..2303381) 1 NC_007204.1 3-oxoacyl-ACP reductase 2303381 3515840 Psyc_1871 Psychrobacter arcticus 273-4 3-oxoacyl-ACP reductase YP_265153.1 2302590 R 259536 CDS YP_265154.1 71066427 3515841 complement(2303677..2304912) 1 NC_007204.1 5 transmembrane helices; hypothetical protein 2304912 3515841 Psyc_1872 Psychrobacter arcticus 273-4 hypothetical protein YP_265154.1 2303677 R 259536 CDS YP_265155.1 71066428 3515842 complement(2305213..2306634) 1 NC_007204.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 2306634 gltD 3515842 gltD Psychrobacter arcticus 273-4 glutamate synthase subunit beta YP_265155.1 2305213 R 259536 CDS YP_265156.1 71066429 3515843 complement(2306818..2311281) 1 NC_007204.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 2311281 gltB 3515843 gltB Psychrobacter arcticus 273-4 glutamate synthase subunit alpha YP_265156.1 2306818 R 259536 CDS YP_265157.1 71066430 3515844 complement(2312055..2312345) 1 NC_007204.1 hypothetical protein 2312345 3515844 Psyc_1875 Psychrobacter arcticus 273-4 hypothetical protein YP_265157.1 2312055 R 259536 CDS YP_265158.1 71066431 3515845 complement(2312335..2313291) 1 NC_007204.1 RBS found, no alignment; hypothetical protein 2313291 3515845 Psyc_1876 Psychrobacter arcticus 273-4 hypothetical protein YP_265158.1 2312335 R 259536 CDS YP_265159.1 71066432 3515846 complement(2313403..2314569) 1 NC_007204.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 2314569 aroB 3515846 aroB Psychrobacter arcticus 273-4 3-dehydroquinate synthase YP_265159.1 2313403 R 259536 CDS YP_265160.1 71066433 3515847 complement(2314791..2315351) 1 NC_007204.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 2315351 aroK 3515847 aroK Psychrobacter arcticus 273-4 shikimate kinase YP_265160.1 2314791 R 259536 CDS YP_265161.1 71066434 3515848 complement(2315518..2317788) 1 NC_007204.1 Outer Bacterial Membrane Secretin (Secretin) Family; fimbrial assembly protein PilQ 2317788 pilQ 3515848 pilQ Psychrobacter arcticus 273-4 fimbrial assembly protein PilQ YP_265161.1 2315518 R 259536 CDS YP_265162.1 71066435 3515849 complement(2317816..2318355) 1 NC_007204.1 type IV pilus assembly 2318355 pilP 3515849 pilP Psychrobacter arcticus 273-4 type IV pilus assembly YP_265162.1 2317816 R 259536 CDS YP_265163.1 71066436 3515850 complement(2318355..2319083) 1 NC_007204.1 type IV pilus biogenesis 2319083 pilO 3515850 pilO Psychrobacter arcticus 273-4 type IV pilus biogenesis YP_265163.1 2318355 R 259536 CDS YP_265164.1 71066437 3515851 complement(2319080..2319745) 1 NC_007204.1 type IV pilus biogenesis fimbrial assembly 2319745 pilN 3515851 pilN Psychrobacter arcticus 273-4 type IV pilus biogenesis fimbrial assembly YP_265164.1 2319080 R 259536 CDS YP_265165.1 71066438 3515852 complement(2319745..2320800) 1 NC_007204.1 type IV pilus assembly protein 2320800 pilM 3515852 pilM Psychrobacter arcticus 273-4 type IV pilus assembly protein YP_265165.1 2319745 R 259536 CDS YP_265166.1 71066439 3515853 2320996..2323602 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.951 at residue 32; penicillin-binding protein 1A 2323602 mrcA 3515853 mrcA Psychrobacter arcticus 273-4 penicillin-binding protein 1A YP_265166.1 2320996 D 259536 CDS YP_265167.1 71066440 3515854 complement(2323944..2324483) 1 NC_007204.1 hypothetical protein 2324483 3515854 Psyc_1885 Psychrobacter arcticus 273-4 hypothetical protein YP_265167.1 2323944 R 259536 CDS YP_265168.1 71066441 3515855 complement(2324839..2329059) 1 NC_007204.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 2329059 rpoC 3515855 rpoC Psychrobacter arcticus 273-4 DNA-directed RNA polymerase subunit beta' YP_265168.1 2324839 R 259536 CDS YP_265169.1 71066442 3515856 complement(2329248..2333366) 1 NC_007204.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 2333366 rpoB 3515856 rpoB Psychrobacter arcticus 273-4 DNA-directed RNA polymerase subunit beta YP_265169.1 2329248 R 259536 CDS YP_265170.1 71066443 3515857 complement(2334121..2334492) 1 NC_007204.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 2334492 rplL 3515857 rplL Psychrobacter arcticus 273-4 50S ribosomal protein L7/L12 YP_265170.1 2334121 R 259536 CDS YP_265171.1 71066444 3515858 complement(2334619..2335146) 1 NC_007204.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 2335146 rplJ 3515858 rplJ Psychrobacter arcticus 273-4 50S ribosomal protein L10 YP_265171.1 2334619 R 259536 CDS YP_265172.1 71066445 3515859 complement(2335584..2336285) 1 NC_007204.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 2336285 rplA 3515859 rplA Psychrobacter arcticus 273-4 50S ribosomal protein L1 YP_265172.1 2335584 R 259536 CDS YP_265173.1 71066446 3515860 complement(2336285..2336716) 1 NC_007204.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 2336716 rplK 3515860 rplK Psychrobacter arcticus 273-4 50S ribosomal protein L11 YP_265173.1 2336285 R 259536 CDS YP_265174.1 71066447 3515861 complement(2336805..2337335) 1 NC_007204.1 Citation: Nehrke K.W. , Platt T. , Zalatan F. NusG alters rho-dependent termination of transcription in vitro independent of kinetic coupling. Gene Expr. 3: 119- 133 (1993) [PubMed: 7505669 ]; transcription antitermination protein nusG 2337335 nusG 3515861 nusG Psychrobacter arcticus 273-4 transcription antitermination protein nusG YP_265174.1 2336805 R 259536 CDS YP_265175.1 71066448 3515862 complement(2337407..2337895) 1 NC_007204.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 2337895 secE 3515862 secE Psychrobacter arcticus 273-4 preprotein translocase subunit SecE YP_265175.1 2337407 R 259536 CDS YP_265176.1 71066449 3515864 complement(2338442..2339632) 1 NC_007204.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2339632 tufBb 3515864 tufBb Psychrobacter arcticus 273-4 elongation factor Tu YP_265176.1 2338442 R 259536 CDS YP_265177.1 71066450 3515865 complement(2339853..2341979) 1 NC_007204.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2341979 fusA1 3515865 fusA1 Psychrobacter arcticus 273-4 elongation factor G YP_265177.1 2339853 R 259536 CDS YP_265178.1 71066451 3515866 complement(2342366..2342839) 1 NC_007204.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 2342839 rpsG 3515866 rpsG Psychrobacter arcticus 273-4 30S ribosomal protein S7 YP_265178.1 2342366 R 259536 CDS YP_265179.1 71066452 3515867 complement(2343048..2343422) 1 NC_007204.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 2343422 rpsL 3515867 rpsL Psychrobacter arcticus 273-4 30S ribosomal protein S12 YP_265179.1 2343048 R 259536 CDS YP_265180.1 71066453 3515868 complement(2343962..2344990) 1 NC_007204.1 RBS found, no alignment against anything in BLAST; hypothetical protein 2344990 3515868 Psyc_1898 Psychrobacter arcticus 273-4 hypothetical protein YP_265180.1 2343962 R 259536 CDS YP_265181.1 71066454 3515869 2345649..2346884 1 NC_007204.1 3-oxoacyl-ACP synthase 2346884 fabB 3515869 fabB Psychrobacter arcticus 273-4 3-oxoacyl-ACP synthase YP_265181.1 2345649 D 259536 CDS YP_265182.1 71066455 3515870 2346888..2348597 1 NC_007204.1 p-aminobenzoate synthase, component I 2348597 pabB 3515870 pabB Psychrobacter arcticus 273-4 p-aminobenzoate synthase, component I YP_265182.1 2346888 D 259536 CDS YP_265183.1 71066456 3515871 complement(2348849..2349982) 1 NC_007204.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2349982 3515871 Psyc_1901 Psychrobacter arcticus 273-4 histidinol-phosphate aminotransferase YP_265183.1 2348849 R 259536 CDS YP_265184.1 71066457 3515872 complement(2350045..2351340) 1 NC_007204.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2351340 hisD 3515872 hisD Psychrobacter arcticus 273-4 histidinol dehydrogenase YP_265184.1 2350045 R 259536 CDS YP_265185.1 71066458 3515873 complement(2351587..2352282) 1 NC_007204.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase 2352282 hisG 3515873 hisG Psychrobacter arcticus 273-4 ATP phosphoribosyltransferase YP_265185.1 2351587 R 259536 CDS YP_265186.1 71066459 3515874 complement(2352430..2353698) 1 NC_007204.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2353698 murA 3515874 murA Psychrobacter arcticus 273-4 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_265186.1 2352430 R 259536 CDS YP_265187.1 71066460 3515875 complement(2353814..2354065) 1 NC_007204.1 In E. coli, over-expression of this protein causes round morphology and may be involved in switching the cell between elongation and septation systems during cell division. The expression of BolA is growth rate regulated and is induced during the tran; BolA transcriptional superfamily; hypothetical protein 2354065 3515875 Psyc_1905 Psychrobacter arcticus 273-4 hypothetical protein YP_265187.1 2353814 R 259536 CDS YP_265188.1 71066461 3515876 complement(2354227..2355177) 1 NC_007204.1 esterase/lipase/thioesterase, active site; hypothetical protein 2355177 3515876 Psyc_1906 Psychrobacter arcticus 273-4 hypothetical protein YP_265188.1 2354227 R 259536 CDS YP_265189.1 71066462 3515877 complement(2355421..2356101) 1 NC_007204.1 transport-associated domain; hypothetical protein 2356101 3515877 Psyc_1907 Psychrobacter arcticus 273-4 hypothetical protein YP_265189.1 2355421 R 259536 CDS YP_265190.1 71066463 3515878 complement(2356328..2356849) 1 NC_007204.1 protein of unknown function UPF0102; hypothetical protein 2356849 3515878 Psyc_1908 Psychrobacter arcticus 273-4 hypothetical protein YP_265190.1 2356328 R 259536 CDS YP_265191.1 71066464 3515879 2357009..2357968 1 NC_007204.1 TP methylase domain; uroporphyrin-III C/tetrapyrrole methyltransferase 2357968 3515879 Psyc_1909 Psychrobacter arcticus 273-4 uroporphyrin-III C/tetrapyrrole methyltransferase YP_265191.1 2357009 D 259536 CDS YP_265192.1 71066465 3515880 2358027..2359046 1 NC_007204.1 carbohydrate kinase 2359046 pfkB 3515880 pfkB Psychrobacter arcticus 273-4 carbohydrate kinase YP_265192.1 2358027 D 259536 CDS YP_265193.1 71066466 3515881 complement(2359205..2359888) 1 NC_007204.1 HesB/NifU - like protein; hypothetical protein 2359888 3515881 Psyc_1911 Psychrobacter arcticus 273-4 hypothetical protein YP_265193.1 2359205 R 259536 CDS YP_265194.1 71066467 3515882 2360398..2360745 1 NC_007204.1 carboxymuconolactone decarboxylase family protein 2360745 3515882 Psyc_1912 Psychrobacter arcticus 273-4 carboxymuconolactone decarboxylase family protein YP_265194.1 2360398 D 259536 CDS YP_265195.1 71066468 3515883 2361125..2362192 1 NC_007204.1 NadM-Nudix subfamily; involved in creation of nicotanimide adenine dinucleotide NAD from either biosynthetic or salvage pathways; bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase 2362192 nadR 3515883 nadR Psychrobacter arcticus 273-4 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase YP_265195.1 2361125 D 259536 CDS YP_265196.1 71066469 3515884 2362309..2363706 1 NC_007204.1 nicotinate phosphoribosyltransferase 2363706 3515884 Psyc_1914 Psychrobacter arcticus 273-4 nicotinate phosphoribosyltransferase YP_265196.1 2362309 D 259536 CDS YP_265197.1 71066470 3515885 2363700..2364542 1 NC_007204.1 Lipolytic enzyme, G-D-S-L family, motif; hypothetical protein 2364542 3515885 Psyc_1915 Psychrobacter arcticus 273-4 hypothetical protein YP_265197.1 2363700 D 259536 CDS YP_265198.2 161611071 3515886 complement(2364663..2364944) 1 NC_007204.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2364944 rpmE2 3515886 rpmE2 Psychrobacter arcticus 273-4 50S ribosomal protein L31 YP_265198.2 2364663 R 259536 CDS YP_265199.1 71066472 3515887 2365381..2366004 1 NC_007204.1 Possible base-induced periplasmic protein. Contains a signal peptide; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.984 at residue 28; hypothetical protein 2366004 3515887 Psyc_1917 Psychrobacter arcticus 273-4 hypothetical protein YP_265199.1 2365381 D 259536 CDS YP_265200.1 71066473 3515888 complement(2366158..2366592) 1 NC_007204.1 lipoprotein repeat motif; hypothetical protein 2366592 3515888 Psyc_1918 Psychrobacter arcticus 273-4 hypothetical protein YP_265200.1 2366158 R 259536 CDS YP_265201.1 71066474 3515889 2367112..2368686 1 NC_007204.1 hypothetical protein 2368686 3515889 Psyc_1919 Psychrobacter arcticus 273-4 hypothetical protein YP_265201.1 2367112 D 259536 CDS YP_265202.1 71066475 3515890 complement(2368788..2369465) 1 NC_007204.1 lysine decarboxylases motif; hypothetical protein 2369465 3515890 Psyc_1920 Psychrobacter arcticus 273-4 hypothetical protein YP_265202.1 2368788 R 259536 CDS YP_265203.1 71066476 3515891 2369784..2370374 1 NC_007204.1 metallopeptidase peptidase 2370374 3515891 Psyc_1921 Psychrobacter arcticus 273-4 metallopeptidase peptidase YP_265203.1 2369784 D 259536 CDS YP_265204.1 71066477 3515892 complement(2370387..2371478) 1 NC_007204.1 signal transduction histidine kinase sensor 2371478 phoR 3515892 phoR Psychrobacter arcticus 273-4 signal transduction histidine kinase sensor YP_265204.1 2370387 R 259536 CDS YP_265205.1 71066478 3515893 complement(2371567..2372271) 1 NC_007204.1 two component transcriptional regulator 2372271 phoB 3515893 phoB Psychrobacter arcticus 273-4 two component transcriptional regulator YP_265205.1 2371567 R 259536 CDS YP_265206.1 71066479 3515894 complement(2372433..2372888) 1 NC_007204.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 2372888 3515894 Psyc_1924 Psychrobacter arcticus 273-4 D-tyrosyl-tRNA(Tyr) deacylase YP_265206.1 2372433 R 259536 CDS YP_265207.1 71066480 3515895 2373065..2373898 1 NC_007204.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 2373898 psd 3515895 psd Psychrobacter arcticus 273-4 phosphatidylserine decarboxylase YP_265207.1 2373065 D 259536 CDS YP_265208.1 71066481 3515896 2374233..2375387 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.993) with cleavage site probability 0.329 at residue 21; phosphate ABC transporter periplasmic solute binding subunit PstS 2375387 pstS 3515896 pstS Psychrobacter arcticus 273-4 phosphate ABC transporter periplasmic solute binding subunit PstS YP_265208.1 2374233 D 259536 CDS YP_265209.1 71066482 3515897 2375595..2376545 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.639) with cleavage site probability 0.626 at residue 45; phosphate ABC transporter inner membrane protein PstC 2376545 pstC 3515897 pstC Psychrobacter arcticus 273-4 phosphate ABC transporter inner membrane protein PstC YP_265209.1 2375595 D 259536 CDS YP_265210.1 71066483 3515898 2376628..2377542 1 NC_007204.1 phosphate ABC transporter inner membrane protein PstA 2377542 pstA 3515898 pstA Psychrobacter arcticus 273-4 phosphate ABC transporter inner membrane protein PstA YP_265210.1 2376628 D 259536 CDS YP_265211.1 71066484 3515899 2377642..2378559 1 NC_007204.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 2378559 pstB 3515899 pstB Psychrobacter arcticus 273-4 phosphate transporter ATP-binding protein YP_265211.1 2377642 D 259536 CDS YP_265212.1 71066485 3515900 2378645..2379376 1 NC_007204.1 phosphate uptake regulator PhoU 2379376 phoU 3515900 phoU Psychrobacter arcticus 273-4 phosphate uptake regulator PhoU YP_265212.1 2378645 D 259536 CDS YP_265213.1 71066486 3515901 complement(2379467..2380111) 1 NC_007204.1 contains metal phosphohydrolase domains only but no regulatory domains as seen with signal transduction function proteins; metal dependent phosphohydrolase 2380111 3515901 Psyc_1931 Psychrobacter arcticus 273-4 metal dependent phosphohydrolase YP_265213.1 2379467 R 259536 CDS YP_265214.1 71066487 3515902 complement(2380283..2380858) 1 NC_007204.1 isochorismatase hydrolase; hypothetical protein 2380858 3515902 Psyc_1932 Psychrobacter arcticus 273-4 hypothetical protein YP_265214.1 2380283 R 259536 CDS YP_265215.1 71066488 3515903 complement(2381258..2382430) 1 NC_007204.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 2382430 fadA 3515903 fadA Psychrobacter arcticus 273-4 3-ketoacyl-CoA thiolase YP_265215.1 2381258 R 259536 CDS YP_265216.1 71066489 3515904 complement(2382574..2384733) 1 NC_007204.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 2384733 fadB 3515904 fadB Psychrobacter arcticus 273-4 multifunctional fatty acid oxidation complex subunit alpha YP_265216.1 2382574 R 259536 CDS YP_265217.1 71066490 3515905 2385466..2386473 1 NC_007204.1 farnesyl-diphosphate synthase 2386473 ispA 3515905 ispA Psychrobacter arcticus 273-4 farnesyl-diphosphate synthase YP_265217.1 2385466 D 259536 CDS YP_265218.1 71066491 3515906 2386514..2387332 1 NC_007204.1 hypothetical protein 2387332 3515906 Psyc_1936 Psychrobacter arcticus 273-4 hypothetical protein YP_265218.1 2386514 D 259536 CDS YP_265219.1 71066492 3515907 2387413..2388357 1 NC_007204.1 hypothetical protein 2388357 3515907 Psyc_1937 Psychrobacter arcticus 273-4 hypothetical protein YP_265219.1 2387413 D 259536 CDS YP_265220.1 71066493 3515908 complement(2388452..2389081) 1 NC_007204.1 superoxide dismutase 2389081 sodB 3515908 sodB Psychrobacter arcticus 273-4 superoxide dismutase YP_265220.1 2388452 R 259536 CDS YP_265221.1 71066494 3515909 2389621..2390274 1 NC_007204.1 HAM1 protein 2390274 3515909 Psyc_1939 Psychrobacter arcticus 273-4 HAM1 protein YP_265221.1 2389621 D 259536 CDS YP_265222.1 71066495 3515910 2390857..2392200 1 NC_007204.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2392200 tig 3515910 tig Psychrobacter arcticus 273-4 trigger factor YP_265222.1 2390857 D 259536 CDS YP_265223.1 71066496 3515911 2392628..2393305 1 NC_007204.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2393305 clpP 3515911 clpP Psychrobacter arcticus 273-4 ATP-dependent Clp protease proteolytic subunit YP_265223.1 2392628 D 259536 CDS YP_265224.1 71066497 3515912 2393438..2394712 1 NC_007204.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2394712 clpX 3515912 clpX Psychrobacter arcticus 273-4 ATP-dependent protease ATP-binding subunit ClpX YP_265224.1 2393438 D 259536 CDS YP_265225.1 71066498 3515913 2395326..2396309 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.887) with cleavage site probability 0.295 at residue 27; cytochrome C 2396309 3515913 Psyc_1943 Psychrobacter arcticus 273-4 cytochrome C YP_265225.1 2395326 D 259536 CDS YP_265226.1 71066499 3515914 complement(2396574..2397668) 1 NC_007204.1 Perfringolysin O (pfo)is a pore-forming cytolysin that is able to lyse red blood cells. 9 transmembrane helices predicted; Citation: FEMS Microbiology Letters 225 (2003)241-247.; toxin regulator pfoR 2397668 pfoR 3515914 pfoR Psychrobacter arcticus 273-4 toxin regulator pfoR YP_265226.1 2396574 R 259536 CDS YP_265227.1 71066500 3515915 complement(2397818..2398597) 1 NC_007204.1 hypothetical protein 2398597 3515915 Psyc_1945 Psychrobacter arcticus 273-4 hypothetical protein YP_265227.1 2397818 R 259536 CDS YP_265228.1 71066501 3515916 complement(2398666..2400495) 1 NC_007204.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2400495 argS 3515916 argS Psychrobacter arcticus 273-4 arginyl-tRNA synthetase YP_265228.1 2398666 R 259536 CDS YP_265229.1 71066502 3515917 2400924..2401142 1 NC_007204.1 hypothetical protein 2401142 3515917 Psyc_1947 Psychrobacter arcticus 273-4 hypothetical protein YP_265229.1 2400924 D 259536 CDS YP_265230.1 71066503 3515918 complement(2401172..2402224) 1 NC_007204.1 possible methyltransferase function; hypothetical protein 2402224 3515918 Psyc_1948 Psychrobacter arcticus 273-4 hypothetical protein YP_265230.1 2401172 R 259536 CDS YP_265231.1 71066504 3515919 complement(2402286..2403074) 1 NC_007204.1 methyltransferase 2403074 3515919 Psyc_1949 Psychrobacter arcticus 273-4 methyltransferase YP_265231.1 2402286 R 259536 CDS YP_265232.1 71066505 3516136 2403309..2403830 1 NC_007204.1 peptide methionine sulfoxide reductase 2403830 3516136 Psyc_1950 Psychrobacter arcticus 273-4 peptide methionine sulfoxide reductase YP_265232.1 2403309 D 259536 CDS YP_265233.1 71066506 3515920 2404108..2404290 1 NC_007204.1 hypothetical protein 2404290 3515920 Psyc_1951 Psychrobacter arcticus 273-4 hypothetical protein YP_265233.1 2404108 D 259536 CDS YP_265234.1 71066507 3515921 2404530..2406005 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.951 at residue 27; transglycosylase 2406005 3515921 Psyc_1952 Psychrobacter arcticus 273-4 transglycosylase YP_265234.1 2404530 D 259536 CDS YP_265235.1 71066508 3515922 complement(2406301..2406600) 1 NC_007204.1 RBS found, no hit with any other protein; hypothetical protein 2406600 3515922 Psyc_1953 Psychrobacter arcticus 273-4 hypothetical protein YP_265235.1 2406301 R 259536 CDS YP_265236.1 71066509 3515923 complement(2407053..2408045) 1 NC_007204.1 glutamate racemase 2408045 3515923 Psyc_1954 Psychrobacter arcticus 273-4 glutamate racemase YP_265236.1 2407053 R 259536 CDS YP_265237.1 71066510 3515924 complement(2408217..2408978) 1 NC_007204.1 hypothetical protein 2408978 3515924 Psyc_1955 Psychrobacter arcticus 273-4 hypothetical protein YP_265237.1 2408217 R 259536 CDS YP_265238.1 71066511 3515925 2409522..2411354 1 NC_007204.1 electron transfer flavoprotein-ubiquinone oxidoreductase 2411354 3515925 Psyc_1956 Psychrobacter arcticus 273-4 electron transfer flavoprotein-ubiquinone oxidoreductase YP_265238.1 2409522 D 259536 CDS YP_265239.1 71066512 3515927 complement(2411722..2411862) 1 NC_007204.1 transposase 2411862 3515927 Psyc_1958 Psychrobacter arcticus 273-4 transposase YP_265239.1 2411722 R 259536 CDS YP_265240.1 71066513 3515928 2412963..2413247 1 NC_007204.1 2 TM domains; hypothetical protein 2413247 3515928 Psyc_1959 Psychrobacter arcticus 273-4 hypothetical protein YP_265240.1 2412963 D 259536 CDS YP_265241.1 71066514 3515929 2413252..2415120 1 NC_007204.1 SSS family Na(+)/solute symporter 2415120 3515929 Psyc_1960 Psychrobacter arcticus 273-4 SSS family Na(+)/solute symporter YP_265241.1 2413252 D 259536 CDS YP_265242.1 71066515 3515930 2415401..2415946 1 NC_007204.1 hypothetical protein 2415946 3515930 Psyc_1961 Psychrobacter arcticus 273-4 hypothetical protein YP_265242.1 2415401 D 259536 CDS YP_265243.1 71066516 3515931 complement(2416294..2416770) 1 NC_007204.1 hypothetical protein 2416770 3515931 Psyc_1962 Psychrobacter arcticus 273-4 hypothetical protein YP_265243.1 2416294 R 259536 CDS YP_265244.1 71066517 3515932 complement(2417214..2418503) 1 NC_007204.1 TRAP-T family transporter large inner membrane subunit 2418503 3515932 Psyc_1963 Psychrobacter arcticus 273-4 TRAP-T family transporter large inner membrane subunit YP_265244.1 2417214 R 259536 CDS YP_265245.1 71066518 3515933 complement(2418500..2419027) 1 NC_007204.1 TRAP-T family transporter small inner membrane subunit 2419027 3515933 Psyc_1964 Psychrobacter arcticus 273-4 TRAP-T family transporter small inner membrane subunit YP_265245.1 2418500 R 259536 CDS YP_265246.1 71066519 3515934 complement(2419048..2420109) 1 NC_007204.1 TRAP-T family transporter periplasmic substrate binding subunit 2420109 3515934 Psyc_1965 Psychrobacter arcticus 273-4 TRAP-T family transporter periplasmic substrate binding subunit YP_265246.1 2419048 R 259536 CDS YP_265247.1 71066520 3515940 complement(2426328..2427047) 1 NC_007204.1 hypothetical protein 2427047 3515940 Psyc_1966 Psychrobacter arcticus 273-4 hypothetical protein YP_265247.1 2426328 R 259536 CDS YP_265248.1 71066521 3515941 2427332..2427979 1 NC_007204.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 2427979 upp 3515941 upp Psychrobacter arcticus 273-4 uracil phosphoribosyltransferase YP_265248.1 2427332 D 259536 CDS YP_265249.1 71066522 3515942 2428060..2428812 1 NC_007204.1 glucose/ribitol dehydrogenase 2428812 ydfG 3515942 ydfG Psychrobacter arcticus 273-4 glucose/ribitol dehydrogenase YP_265249.1 2428060 D 259536 CDS YP_265250.1 71066523 3515943 complement(2428983..2429210) 1 NC_007204.1 hypothetical protein 2429210 3515943 Psyc_1969 Psychrobacter arcticus 273-4 hypothetical protein YP_265250.1 2428983 R 259536 CDS YP_265251.1 71066524 3515944 complement(2429332..2430543) 1 NC_007204.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2430543 tyrS 3515944 tyrS Psychrobacter arcticus 273-4 tyrosyl-tRNA synthetase YP_265251.1 2429332 R 259536 CDS YP_265252.1 71066525 3515945 2430663..2432063 1 NC_007204.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2432063 anmK 3515945 anmK Psychrobacter arcticus 273-4 anhydro-N-acetylmuramic acid kinase YP_265252.1 2430663 D 259536 CDS YP_265253.1 71066526 3515946 2432160..2433575 1 NC_007204.1 3-oxoacyl-ACP synthase 2433575 fabF 3515946 fabF Psychrobacter arcticus 273-4 3-oxoacyl-ACP synthase YP_265253.1 2432160 D 259536 CDS YP_265254.1 71066527 3515947 2433691..2434554 1 NC_007204.1 hypothetical protein 2434554 3515947 Psyc_1973 Psychrobacter arcticus 273-4 hypothetical protein YP_265254.1 2433691 D 259536 CDS YP_265255.1 71066528 3515948 complement(2434777..2436594) 1 NC_007204.1 metallopeptidase 2436594 3515948 Psyc_1974 Psychrobacter arcticus 273-4 metallopeptidase YP_265255.1 2434777 R 259536 CDS YP_265256.1 71066529 3515949 complement(2437018..2437428) 1 NC_007204.1 RBS found, no alignment obtained; hypothetical protein 2437428 3515949 Psyc_1975 Psychrobacter arcticus 273-4 hypothetical protein YP_265256.1 2437018 R 259536 CDS YP_265257.1 71066530 3515950 complement(2437575..2439149) 1 NC_007204.1 apolipoprotein N-acyltransferase 2439149 3515950 Psyc_1976 Psychrobacter arcticus 273-4 apolipoprotein N-acyltransferase YP_265257.1 2437575 R 259536 CDS YP_265258.1 71066531 3515951 complement(2439445..2440344) 1 NC_007204.1 magnesium and cobalt efflux protein, CorC 2440344 corC 3515951 corC Psychrobacter arcticus 273-4 magnesium and cobalt efflux protein, CorC YP_265258.1 2439445 R 259536 CDS YP_265259.1 71066532 3515952 2440617..2441951 1 NC_007204.1 Possible membrane spanning protein: 3 TM domains; hypothetical protein 2441951 3515952 Psyc_1978 Psychrobacter arcticus 273-4 hypothetical protein YP_265259.1 2440617 D 259536 CDS YP_265260.1 71066533 3515953 complement(2441984..2442547) 1 NC_007204.1 hypothetical protein 2442547 3515953 Psyc_1979 Psychrobacter arcticus 273-4 hypothetical protein YP_265260.1 2441984 R 259536 CDS YP_265261.1 71066534 3515954 2442708..2443445 1 NC_007204.1 dienelactone hydrolase 2443445 3515954 Psyc_1980 Psychrobacter arcticus 273-4 dienelactone hydrolase YP_265261.1 2442708 D 259536 CDS YP_265262.1 71066535 3515955 2443675..2443917 1 NC_007204.1 hypothetical protein 2443917 3515955 Psyc_1981 Psychrobacter arcticus 273-4 hypothetical protein YP_265262.1 2443675 D 259536 CDS YP_265263.1 71066536 3515956 2444303..2445259 1 NC_007204.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 2445259 rbgA 3515956 rbgA Psychrobacter arcticus 273-4 ribosomal biogenesis GTPase YP_265263.1 2444303 D 259536 CDS YP_265264.1 71066537 3515957 2445353..2446567 1 NC_007204.1 COG3328 and PFam00872.; transposase mutator family protein 2446567 3515957 Psyc_1983 Psychrobacter arcticus 273-4 transposase mutator family protein YP_265264.1 2445353 D 259536 CDS YP_265265.1 71066538 3515958 2446700..2448061 1 NC_007204.1 Citation: Michaels ML, Miller JH. 1992. The GO system protects organisms from the mutagenic effect of the spontaneous lesion 8-hydroxyguanine (7,8-dihydro-8-oxoguanine). J Bacteriol. 174(20):6321-5.; A/G-specific adenine glycosylase 2448061 mutY 3515958 mutY Psychrobacter arcticus 273-4 A/G-specific adenine glycosylase YP_265265.1 2446700 D 259536 CDS YP_265266.1 71066539 3515959 complement(2448309..2449211) 1 NC_007204.1 acyl-CoA thioesterase 2449211 tesB 3515959 tesB Psychrobacter arcticus 273-4 acyl-CoA thioesterase YP_265266.1 2448309 R 259536 CDS YP_265267.1 71066540 3515960 complement(2449487..2452435) 1 NC_007204.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 2452435 hepA 3515960 hepA Psychrobacter arcticus 273-4 ATP-dependent helicase HepA YP_265267.1 2449487 R 259536 CDS YP_265268.1 71066541 3515961 2453224..2454183 1 NC_007204.1 D-isomer specific 2-hydroxyacid dehydrogenase 2454183 3515961 Psyc_1987 Psychrobacter arcticus 273-4 D-isomer specific 2-hydroxyacid dehydrogenase YP_265268.1 2453224 D 259536 CDS YP_265269.1 71066542 3515962 complement(2454208..2454921) 1 NC_007204.1 ribosomal large subunit pseudouridine synthase A 2454921 rluA 3515962 rluA Psychrobacter arcticus 273-4 ribosomal large subunit pseudouridine synthase A YP_265269.1 2454208 R 259536 CDS YP_265270.1 71066543 3515963 2455356..2455682 1 NC_007204.1 thioredoxin 2455682 trxA 3515963 trxA Psychrobacter arcticus 273-4 thioredoxin YP_265270.1 2455356 D 259536 CDS YP_265271.1 71066544 3515964 2456173..2457480 1 NC_007204.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2457480 rho 3515964 rho Psychrobacter arcticus 273-4 transcription termination factor Rho YP_265271.1 2456173 D 259536 CDS YP_265272.1 71066545 3515965 2457828..2458067 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.994) with cleavage site probability 0.314 at residue 25; hypothetical protein 2458067 3515965 Psyc_1991 Psychrobacter arcticus 273-4 hypothetical protein YP_265272.1 2457828 D 259536 CDS YP_265273.1 71066546 3515966 complement(2458371..2459255) 1 NC_007204.1 Members of this family of bacterial proteins are described as hypothetical proteins or zinc metallopeptidases:there is no evidence to support their function as metallopeptidases.; neutral zinc metallopeptidase 2459255 3515966 Psyc_1992 Psychrobacter arcticus 273-4 neutral zinc metallopeptidase YP_265273.1 2458371 R 259536 CDS YP_265274.1 71066547 3515967 2459800..2460138 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.978 at residue 21; hypothetical protein 2460138 3515967 Psyc_1993 Psychrobacter arcticus 273-4 hypothetical protein YP_265274.1 2459800 D 259536 CDS YP_265275.1 71066548 3515968 complement(2460454..2460753) 1 NC_007204.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2460753 ihfA 3515968 ihfA Psychrobacter arcticus 273-4 integration host factor subunit alpha YP_265275.1 2460454 R 259536 CDS YP_265276.1 71066549 3515969 complement(2461001..2463406) 1 NC_007204.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2463406 pheT 3515969 pheT Psychrobacter arcticus 273-4 phenylalanyl-tRNA synthetase subunit beta YP_265276.1 2461001 R 259536 CDS YP_265277.1 71066550 3515970 complement(2463466..2464521) 1 NC_007204.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2464521 pheS 3515970 pheS Psychrobacter arcticus 273-4 phenylalanyl-tRNA synthetase subunit alpha YP_265277.1 2463466 R 259536 CDS YP_265278.1 71066551 3515971 complement(2464845..2465201) 1 NC_007204.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2465201 rplT 3515971 rplT Psychrobacter arcticus 273-4 50S ribosomal protein L20 YP_265278.1 2464845 R 259536 CDS YP_265279.1 71066552 3515972 complement(2465337..2465534) 1 NC_007204.1 50S ribosomal protein L35 2465534 rpmI 3515972 rpmI Psychrobacter arcticus 273-4 50S ribosomal protein L35 YP_265279.1 2465337 R 259536 CDS YP_265280.1 71066553 3515973 2466006..2466854 1 NC_007204.1 This orf aligns to domains of both pyrophosphohydrolase and cyclohydrolase functions, suggesting a bifunctional enzyme.; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase 2466854 hisI 3515973 hisI Psychrobacter arcticus 273-4 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase YP_265280.1 2466006 D 259536 CDS YP_265281.1 71066554 3515974 2467043..2467306 1 NC_007204.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin-arginine translocation protein TatA 2467306 tatA 3515974 tatA Psychrobacter arcticus 273-4 twin-arginine translocation protein TatA YP_265281.1 2467043 D 259536 CDS YP_265282.1 71066555 3515975 2467342..2468031 1 NC_007204.1 Sec-independent protein translocase TatB 2468031 tatB 3515975 tatB Psychrobacter arcticus 273-4 Sec-independent protein translocase TatB YP_265282.1 2467342 D 259536 CDS YP_265283.1 71066556 3515976 2468031..2468867 1 NC_007204.1 Sec-independent protein translocase TatC 2468867 tatC 3515976 tatC Psychrobacter arcticus 273-4 Sec-independent protein translocase TatC YP_265283.1 2468031 D 259536 CDS YP_265284.1 71066557 3515977 2469003..2470502 1 NC_007204.1 Low score to superfamily I DNA and RNA helicases, COG0210.; DNA helicase 2470502 3515977 Psyc_2003 Psychrobacter arcticus 273-4 DNA helicase YP_265284.1 2469003 D 259536 CDS YP_265285.1 71066558 3515978 2470575..2471627 1 NC_007204.1 tRNA-dihydrouridine synthase 2471627 dus 3515978 dus Psychrobacter arcticus 273-4 tRNA-dihydrouridine synthase YP_265285.1 2470575 D 259536 CDS YP_265286.1 71066559 3515979 complement(2471677..2472102) 1 NC_007204.1 3 transmembrane helices; hypothetical protein 2472102 3515979 Psyc_2005 Psychrobacter arcticus 273-4 hypothetical protein YP_265286.1 2471677 R 259536 CDS YP_265287.1 71066560 3515980 complement(2472117..2472530) 1 NC_007204.1 hypothetical protein 2472530 3515980 Psyc_2006 Psychrobacter arcticus 273-4 hypothetical protein YP_265287.1 2472117 R 259536 CDS YP_265288.1 71066561 3515981 2473141..2473662 1 NC_007204.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 2473662 mutT 3515981 mutT Psychrobacter arcticus 273-4 dinucleoside polyphosphate hydrolase YP_265288.1 2473141 D 259536 CDS YP_265289.1 71066562 3515982 complement(2473759..2474853) 1 NC_007204.1 Protein with conserved domain:Zn ion binding; alcohol dehydrogenase 2474853 adh 3515982 adh Psychrobacter arcticus 273-4 alcohol dehydrogenase YP_265289.1 2473759 R 259536 CDS YP_265290.1 71066563 3515983 complement(2475073..2475957) 1 NC_007204.1 DUF833; hypothetical protein 2475957 3515983 Psyc_2009 Psychrobacter arcticus 273-4 hypothetical protein YP_265290.1 2475073 R 259536 CDS YP_265291.1 71066564 3515984 2476423..2477307 1 NC_007204.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2477307 3515984 Psyc_2010 Psychrobacter arcticus 273-4 prolipoprotein diacylglyceryl transferase YP_265291.1 2476423 D 259536 CDS YP_265292.1 71066565 3515985 2477380..2478282 1 NC_007204.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2478282 thyA 3515985 thyA Psychrobacter arcticus 273-4 thymidylate synthase YP_265292.1 2477380 D 259536 CDS YP_265293.1 71066566 3515986 2478326..2478892 1 NC_007204.1 dihydrofolate reductase 2478892 folA 3515986 folA Psychrobacter arcticus 273-4 dihydrofolate reductase YP_265293.1 2478326 D 259536 CDS YP_265294.1 71066567 3515987 complement(2479357..2481201) 1 NC_007204.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2481201 uvrC 3515987 uvrC Psychrobacter arcticus 273-4 excinuclease ABC subunit C YP_265294.1 2479357 R 259536 CDS YP_265295.1 71066568 3515988 complement(2481361..2482881) 1 NC_007204.1 11 transmembrane domains; hypothetical protein 2482881 3515988 Psyc_2014 Psychrobacter arcticus 273-4 hypothetical protein YP_265295.1 2481361 R 259536 CDS YP_265296.1 71066569 3515989 2483367..2483924 1 NC_007204.1 hypothetical protein 2483924 3515989 Psyc_2015 Psychrobacter arcticus 273-4 hypothetical protein YP_265296.1 2483367 D 259536 CDS YP_265297.1 71066570 3515990 complement(2484193..2484585) 1 NC_007204.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2484585 rplS 3515990 rplS Psychrobacter arcticus 273-4 50S ribosomal protein L19 YP_265297.1 2484193 R 259536 CDS YP_265298.1 71066571 3515991 complement(2484774..2485538) 1 NC_007204.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 2485538 trmD 3515991 trmD Psychrobacter arcticus 273-4 tRNA (guanine-N(1)-)-methyltransferase YP_265298.1 2484774 R 259536 CDS YP_265299.1 71066572 3515992 complement(2485641..2486174) 1 NC_007204.1 16S rRNA-processing protein RimM 2486174 rimM 3515992 rimM Psychrobacter arcticus 273-4 16S rRNA-processing protein RimM YP_265299.1 2485641 R 259536 CDS YP_265300.1 71066573 3515993 complement(2486372..2486641) 1 NC_007204.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 2486641 rpsP 3515993 rpsP Psychrobacter arcticus 273-4 30S ribosomal protein S16 YP_265300.1 2486372 R 259536 CDS YP_265301.1 71066574 3515994 2486863..2488431 1 NC_007204.1 signal transduction histidine kinase sensor 2488431 envZ 3515994 envZ Psychrobacter arcticus 273-4 signal transduction histidine kinase sensor YP_265301.1 2486863 D 259536 CDS YP_265302.1 71066575 3515995 complement(2488581..2490266) 1 NC_007204.1 adjacent to predicted histidine kinase response regulator; signal transduction histidine kinase sensor 2490266 3515995 Psyc_2021 Psychrobacter arcticus 273-4 signal transduction histidine kinase sensor YP_265302.1 2488581 R 259536 CDS YP_265303.1 71066576 3515996 complement(2490519..2491235) 1 NC_007204.1 two component transcriptional regulator 2491235 3515996 Psyc_2022 Psychrobacter arcticus 273-4 two component transcriptional regulator YP_265303.1 2490519 R 259536 CDS YP_265304.1 71066577 3515997 complement(2491765..2492181) 1 NC_007204.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 2492181 atpC 3515997 atpC Psychrobacter arcticus 273-4 ATP synthase F0F1 subunit epsilon YP_265304.1 2491765 R 259536 CDS YP_265305.1 71066578 3515998 complement(2492286..2493719) 1 NC_007204.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 2493719 atpD 3515998 atpD Psychrobacter arcticus 273-4 ATP synthase F0F1 subunit beta YP_265305.1 2492286 R 259536 CDS YP_265306.1 71066579 3515999 complement(2493770..2494651) 1 NC_007204.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 2494651 atpG 3515999 atpG Psychrobacter arcticus 273-4 ATP synthase F0F1 subunit gamma YP_265306.1 2493770 R 259536 CDS YP_265307.1 71066580 3516000 complement(2494913..2496457) 1 NC_007204.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 2496457 atpA 3516000 atpA Psychrobacter arcticus 273-4 ATP synthase F0F1 subunit alpha YP_265307.1 2494913 R 259536 CDS YP_265308.1 71066581 3516001 complement(2496550..2497173) 1 NC_007204.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 2497173 atpH 3516001 atpH Psychrobacter arcticus 273-4 ATP synthase F0F1 subunit delta YP_265308.1 2496550 R 259536 CDS YP_265309.1 71066582 3516002 complement(2497187..2497657) 1 NC_007204.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 2497657 atpF 3516002 atpF Psychrobacter arcticus 273-4 ATP synthase F0F1 subunit B YP_265309.1 2497187 R 259536 CDS YP_265310.1 71066583 3516003 complement(2497775..2498023) 1 NC_007204.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 2498023 atpE 3516003 atpE Psychrobacter arcticus 273-4 ATP synthase F0F1 subunit C YP_265310.1 2497775 R 259536 CDS YP_265311.1 71066584 3516004 complement(2498057..2498923) 1 NC_007204.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 2498923 3516004 Psyc_2030 Psychrobacter arcticus 273-4 ATP synthase F0F1 subunit A YP_265311.1 2498057 R 259536 CDS YP_265312.1 71066585 3516005 complement(2499637..2500059) 1 NC_007204.1 ATP synthase subunit I 2500059 atpI 3516005 atpI Psychrobacter arcticus 273-4 ATP synthase subunit I YP_265312.1 2499637 R 259536 CDS YP_265313.1 71066586 3516006 complement(2500460..2501395) 1 NC_007204.1 ABC zinc transporter periplasmic solute binding protein ZnuA 2501395 znuA 3516006 znuA Psychrobacter arcticus 273-4 ABC zinc transporter periplasmic solute binding protein ZnuA YP_265313.1 2500460 R 259536 CDS YP_265314.1 71066587 3516007 2501643..2502158 1 NC_007204.1 contained winged helix domains so likely DNA binding function; FUR family transcriptional regulator 2502158 3516007 Psyc_2033 Psychrobacter arcticus 273-4 FUR family transcriptional regulator YP_265314.1 2501643 D 259536 CDS YP_265315.1 71066588 3516008 2502283..2503014 1 NC_007204.1 ABC zinc transporter ATPase subunit ZnuC 2503014 znuC 3516008 znuC Psychrobacter arcticus 273-4 ABC zinc transporter ATPase subunit ZnuC YP_265315.1 2502283 D 259536 CDS YP_265316.1 71066589 3516009 2503090..2503923 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.776) with cleavage site probability 0.559 at residue 23; ABC zinc transporter inner membrane protein ZnuB 2503923 znuB 3516009 znuB Psychrobacter arcticus 273-4 ABC zinc transporter inner membrane protein ZnuB YP_265316.1 2503090 D 259536 CDS YP_265317.1 71066590 3516010 2504046..2504885 1 NC_007204.1 cyclic AMP phosphodiesterase 2504885 3516010 Psyc_2036 Psychrobacter arcticus 273-4 cyclic AMP phosphodiesterase YP_265317.1 2504046 D 259536 CDS YP_265318.1 71066591 3516011 2505409..2505849 1 NC_007204.1 Expression is increased under low pH conditions. Stancik LM, Stancik DM, et al. (2002). pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. J Bacteriol 2002;184(15);4246-58. PMID: 12107143; Citation: Brown L, Gentry D, Elliott T, Cashel M (2002). DksA affects ppGpp induction of RpoS at a translational level. J Bacteriol 184(16);4455-65. PMID: 12142416; regulator RpoS 2505849 dksA 3516011 dksA Psychrobacter arcticus 273-4 regulator RpoS YP_265318.1 2505409 D 259536 CDS YP_265319.1 71066592 3516012 2506072..2507079 1 NC_007204.1 tRNA synthetase domain-containing protein 2507079 3516012 Psyc_2038 Psychrobacter arcticus 273-4 tRNA synthetase domain-containing protein YP_265319.1 2506072 D 259536 CDS YP_265320.1 71066593 3516013 complement(2507257..2508453) 1 NC_007204.1 cell division protein FtsW 2508453 ftsW 3516013 ftsW Psychrobacter arcticus 273-4 cell division protein FtsW YP_265320.1 2507257 R 259536 CDS YP_265321.1 71066594 3516014 complement(2508808..2510238) 1 NC_007204.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2510238 murD 3516014 murD Psychrobacter arcticus 273-4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_265321.1 2508808 R 259536 CDS YP_265322.1 71066595 3516015 2510748..2512247 1 NC_007204.1 SulP family sulfate permease 2512247 3516015 Psyc_2041 Psychrobacter arcticus 273-4 SulP family sulfate permease YP_265322.1 2510748 D 259536 CDS YP_265323.1 71066596 3516016 2512394..2513248 1 NC_007204.1 hypothetical protein 2513248 3516016 Psyc_2042 Psychrobacter arcticus 273-4 hypothetical protein YP_265323.1 2512394 D 259536 CDS YP_265324.1 71066597 3516017 2513688..2514026 1 NC_007204.1 nitrogen regulatory protein P-II 2514026 glnK 3516017 glnK Psychrobacter arcticus 273-4 nitrogen regulatory protein P-II YP_265324.1 2513688 D 259536 CDS YP_265325.1 71066598 3516018 2514104..2515366 1 NC_007204.1 ammonium transporter 2515366 amtB 3516018 amtB Psychrobacter arcticus 273-4 ammonium transporter YP_265325.1 2514104 D 259536 CDS YP_265326.1 71066599 3516019 complement(2515519..2515902) 1 NC_007204.1 hypothetical protein 2515902 3516019 Psyc_2045 Psychrobacter arcticus 273-4 hypothetical protein YP_265326.1 2515519 R 259536 CDS YP_265327.1 71066600 3516020 complement(2516174..2516437) 1 NC_007204.1 Found RBS, no alignment found; hypothetical protein 2516437 3516020 Psyc_2046 Psychrobacter arcticus 273-4 hypothetical protein YP_265327.1 2516174 R 259536 CDS YP_265328.1 71066601 3516021 complement(2516655..2517563) 1 NC_007204.1 DNA/RNA non-specific endonuclease (Mg-dependent) 2517563 3516021 Psyc_2047 Psychrobacter arcticus 273-4 DNA/RNA non-specific endonuclease (Mg-dependent) YP_265328.1 2516655 R 259536 CDS YP_265329.1 71066602 3516023 2518261..2519055 1 NC_007204.1 3 transmembrane domains; hypothetical protein 2519055 3516023 Psyc_2048 Psychrobacter arcticus 273-4 hypothetical protein YP_265329.1 2518261 D 259536 CDS YP_265330.1 71066603 3516024 2519139..2520578 1 NC_007204.1 cardiolipin synthetase 2 2520578 cls 3516024 cls Psychrobacter arcticus 273-4 cardiolipin synthetase 2 YP_265330.1 2519139 D 259536 CDS YP_265331.1 71066604 3516025 complement(2520768..2521709) 1 NC_007204.1 rRNA (guanine-N1-)-methyltransferase 2521709 rrmA 3516025 rrmA Psychrobacter arcticus 273-4 rRNA (guanine-N1-)-methyltransferase YP_265331.1 2520768 R 259536 CDS YP_265332.1 71066605 3516026 complement(2521871..2522989) 1 NC_007204.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2522989 mraY 3516026 mraY Psychrobacter arcticus 273-4 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_265332.1 2521871 R 259536 CDS YP_265333.1 71066606 3516027 complement(2522993..2524450) 1 NC_007204.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 2524450 murF 3516027 murF Psychrobacter arcticus 273-4 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_265333.1 2522993 R 259536 CDS YP_265334.1 71066607 3516028 complement(2524541..2526295) 1 NC_007204.1 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2526295 murE 3516028 murE Psychrobacter arcticus 273-4 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_265334.1 2524541 R 259536 CDS YP_265335.1 71066608 3516029 complement(2526367..2528454) 1 NC_007204.1 peptidoglycan synthetase FtsI 2528454 ftsI 3516029 ftsI Psychrobacter arcticus 273-4 peptidoglycan synthetase FtsI YP_265335.1 2526367 R 259536 CDS YP_265336.1 71066609 3516030 complement(2528451..2528930) 1 NC_007204.1 FtsL motif, although no BLAST hit, contains ftsL motifided from Pfam, contain RBS; hypothetical protein 2528930 3516030 Psyc_2055 Psychrobacter arcticus 273-4 hypothetical protein YP_265336.1 2528451 R 259536 CDS YP_265337.1 71066610 3516031 complement(2529143..2530297) 1 NC_007204.1 S-adenosyl-methyltransferase MraW 2530297 mraW 3516031 mraW Psychrobacter arcticus 273-4 S-adenosyl-methyltransferase MraW YP_265337.1 2529143 R 259536 CDS YP_265338.1 71066611 3516032 2530575..2532104 1 NC_007204.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2532104 gltX 3516032 gltX Psychrobacter arcticus 273-4 glutamyl-tRNA synthetase YP_265338.1 2530575 D 259536 CDS YP_265339.1 71066612 3516033 2532272..2532637 1 NC_007204.1 hypothetical protein 2532637 3516033 Psyc_2058 Psychrobacter arcticus 273-4 hypothetical protein YP_265339.1 2532272 D 259536 CDS YP_265340.1 71066613 3516036 2533304..2533957 1 NC_007204.1 LysE family amino acid efflux protein 2533957 3516036 Psyc_2059 Psychrobacter arcticus 273-4 LysE family amino acid efflux protein YP_265340.1 2533304 D 259536 CDS YP_265341.1 71066614 3516037 2533990..2534448 1 NC_007204.1 hypothetical protein 2534448 3516037 Psyc_2060 Psychrobacter arcticus 273-4 hypothetical protein YP_265341.1 2533990 D 259536 CDS YP_265342.1 71066615 3516038 complement(2534578..2537397) 1 NC_007204.1 catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2537397 acnA 3516038 acnA Psychrobacter arcticus 273-4 aconitate hydratase YP_265342.1 2534578 R 259536 CDS YP_265343.1 71066616 3516039 complement(2537779..2538792) 1 NC_007204.1 hypothetical protein 2538792 3516039 Psyc_2062 Psychrobacter arcticus 273-4 hypothetical protein YP_265343.1 2537779 R 259536 CDS YP_265344.1 71066617 3516040 2538908..2539624 1 NC_007204.1 6 transmembrane helices predicted; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.690) with cleavage site probability 0.683 at residue 25; hypothetical protein 2539624 3516040 Psyc_2063 Psychrobacter arcticus 273-4 hypothetical protein YP_265344.1 2538908 D 259536 CDS YP_265345.1 71066618 3516041 2539668..2540219 1 NC_007204.1 hypothetical protein 2540219 3516041 Psyc_2064 Psychrobacter arcticus 273-4 hypothetical protein YP_265345.1 2539668 D 259536 CDS YP_265346.1 71066619 3516042 complement(2540243..2541166) 1 NC_007204.1 glutamine amidotransferase, class-II protein 2541166 3516042 Psyc_2065 Psychrobacter arcticus 273-4 glutamine amidotransferase, class-II protein YP_265346.1 2540243 R 259536 CDS YP_265347.1 71066620 3516043 complement(2541167..2541427) 1 NC_007204.1 hypothetical protein 2541427 3516043 Psyc_2066 Psychrobacter arcticus 273-4 hypothetical protein YP_265347.1 2541167 R 259536 CDS YP_265348.1 71066621 3516044 complement(2541481..2542656) 1 NC_007204.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 2542656 thrB 3516044 thrB Psychrobacter arcticus 273-4 homoserine kinase YP_265348.1 2541481 R 259536 CDS YP_265349.1 71066622 3516045 2542986..2543768 1 NC_007204.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2543768 hisF 3516045 hisF Psychrobacter arcticus 273-4 imidazole glycerol phosphate synthase subunit HisF YP_265349.1 2542986 D 259536 CDS YP_265350.1 71066623 3516046 2543959..2544480 1 NC_007204.1 6,7-dimethyl-8-ribityllumazine synthase 2544480 ribH 3516046 ribH Psychrobacter arcticus 273-4 6,7-dimethyl-8-ribityllumazine synthase YP_265350.1 2543959 D 259536 CDS YP_265351.1 71066624 3516047 2544836..2545963 1 NC_007204.1 NusB antitermination factor 2545963 nusB 3516047 nusB Psychrobacter arcticus 273-4 NusB antitermination factor YP_265351.1 2544836 D 259536 CDS YP_265352.1 71066625 3516048 2545966..2546997 1 NC_007204.1 thiamine-monophosphate kinase 2546997 thiL 3516048 thiL Psychrobacter arcticus 273-4 thiamine-monophosphate kinase YP_265352.1 2545966 D 259536 CDS YP_265353.1 71066626 3516049 2547001..2547579 1 NC_007204.1 phosphatidylglycerophosphatase 2547579 pgpA 3516049 pgpA Psychrobacter arcticus 273-4 phosphatidylglycerophosphatase YP_265353.1 2547001 D 259536 CDS YP_265354.1 71066627 3516050 2547763..2549139 1 NC_007204.1 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase 2549139 glmU 3516050 glmU Psychrobacter arcticus 273-4 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase YP_265354.1 2547763 D 259536 CDS YP_265355.1 71066628 3516051 2549306..2551150 1 NC_007204.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 2551150 glmS 3516051 glmS Psychrobacter arcticus 273-4 glucosamine--fructose-6-phosphate aminotransferase YP_265355.1 2549306 D 259536 CDS YP_265356.1 71066629 3516052 2551648..2552256 1 NC_007204.1 nickel-dependent hydrogenase cytochrome b-type subunit 2552256 3516052 Psyc_2075 Psychrobacter arcticus 273-4 nickel-dependent hydrogenase cytochrome b-type subunit YP_265356.1 2551648 D 259536 CDS YP_265357.1 71066630 3516053 2552276..2552950 1 NC_007204.1 OmpR family two-component transcriptional regulator 2552950 3516053 Psyc_2076 Psychrobacter arcticus 273-4 OmpR family two-component transcriptional regulator YP_265357.1 2552276 D 259536 CDS YP_265358.1 71066631 3516054 2553009..2554472 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.766) with cleavage site probability 0.531 at residue 31; signal transduction histidine kinase sensor 2554472 3516054 Psyc_2077 Psychrobacter arcticus 273-4 signal transduction histidine kinase sensor YP_265358.1 2553009 D 259536 CDS YP_265359.1 71066632 3516055 2554572..2555138 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.992) with cleavage site probability 0.797 at residue 35; hypothetical protein 2555138 3516055 Psyc_2078 Psychrobacter arcticus 273-4 hypothetical protein YP_265359.1 2554572 D 259536 CDS YP_265360.1 71066633 3516056 2555131..2555445 1 NC_007204.1 hypothetical protein 2555445 3516056 Psyc_2079 Psychrobacter arcticus 273-4 hypothetical protein YP_265360.1 2555131 D 259536 CDS YP_265361.1 71066634 3516057 2555501..2556613 1 NC_007204.1 ApbE family lipoprotein 2556613 3516057 Psyc_2080 Psychrobacter arcticus 273-4 ApbE family lipoprotein YP_265361.1 2555501 D 259536 CDS YP_265362.1 71066635 3516058 2556785..2557468 1 NC_007204.1 hypothetical protein 2557468 3516058 Psyc_2081 Psychrobacter arcticus 273-4 hypothetical protein YP_265362.1 2556785 D 259536 CDS YP_265363.1 71066636 3516059 2557555..2558256 1 NC_007204.1 possible integral membrane proteins: 5 TM domains; hypothetical protein 2558256 3516059 Psyc_2082 Psychrobacter arcticus 273-4 hypothetical protein YP_265363.1 2557555 D 259536 CDS YP_265364.1 71066637 3516060 complement(2558347..2561457) 1 NC_007204.1 RND superfamily multidrug efflux system protein 2561457 3516060 Psyc_2083 Psychrobacter arcticus 273-4 RND superfamily multidrug efflux system protein YP_265364.1 2558347 R 259536 CDS YP_265365.1 71066638 3516061 complement(2561454..2562737) 1 NC_007204.1 This protein contains homology to the HlyD family secretion proteins (Pfam 00529) and the Membrane-fusion protein AcrA (COG0845). One transmembrane helix predicted.; RND efflux membrane fusion protein 2562737 3516061 Psyc_2084 Psychrobacter arcticus 273-4 RND efflux membrane fusion protein YP_265365.1 2561454 R 259536 CDS YP_265366.1 71066639 3516062 complement(2563238..2565664) 1 NC_007204.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 2565664 3516062 Psyc_2085 Psychrobacter arcticus 273-4 ATP-dependent DNA helicase RecG YP_265366.1 2563238 R 259536 CDS YP_265367.1 71066640 3516063 2565835..2566716 1 NC_007204.1 There are 9 addittional ORFs identical to this one.; IS4 family transposase 2566716 3516063 Psyc_2086 Psychrobacter arcticus 273-4 IS4 family transposase YP_265367.1 2565835 D 259536 CDS YP_265368.1 71066641 3516064 2566972..2567976 1 NC_007204.1 hypothetical protein 2567976 3516064 Psyc_2087 Psychrobacter arcticus 273-4 hypothetical protein YP_265368.1 2566972 D 259536 CDS YP_265369.1 71066642 3516065 complement(2568252..2568839) 1 NC_007204.1 hypothetical protein 2568839 3516065 Psyc_2088 Psychrobacter arcticus 273-4 hypothetical protein YP_265369.1 2568252 R 259536 CDS YP_265370.1 71066643 3516066 2569228..2570550 1 NC_007204.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2570550 argA 3516066 argA Psychrobacter arcticus 273-4 N-acetylglutamate synthase YP_265370.1 2569228 D 259536 CDS YP_265371.1 71066644 3516067 complement(2570676..2571407) 1 NC_007204.1 peptidyl-prolyl isomerase 2571407 3516067 Psyc_2090 Psychrobacter arcticus 273-4 peptidyl-prolyl isomerase YP_265371.1 2570676 R 259536 CDS YP_265372.1 71066645 3516068 2571836..2573584 1 NC_007204.1 Probable transmembrane protein: 11 TM domain; hypothetical protein 2573584 3516068 Psyc_2091 Psychrobacter arcticus 273-4 hypothetical protein YP_265372.1 2571836 D 259536 CDS YP_265373.1 71066646 3516069 2574267..2575064 1 NC_007204.1 short-chain dehydrogenase 2575064 3516069 Psyc_2092 Psychrobacter arcticus 273-4 short-chain dehydrogenase YP_265373.1 2574267 D 259536 CDS YP_265374.1 71066647 3516070 complement(2575345..2576079) 1 NC_007204.1 This protein contains an acyltransferase domain (PFam 01553). This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. RBS found.; hypothetical protein 2576079 3516070 Psyc_2093 Psychrobacter arcticus 273-4 hypothetical protein YP_265374.1 2575345 R 259536 CDS YP_265375.1 71066648 3516071 complement(2576187..2578073) 1 NC_007204.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2578073 parE 3516071 parE Psychrobacter arcticus 273-4 DNA topoisomerase IV subunit B YP_265375.1 2576187 R 259536 CDS YP_265376.1 71066649 3516072 complement(2578213..2578869) 1 NC_007204.1 This protein contains an esterase/lipase/thioesterase active site (COG3150). RBS found.; hypothetical protein 2578869 3516072 Psyc_2095 Psychrobacter arcticus 273-4 hypothetical protein YP_265376.1 2578213 R 259536 CDS YP_265377.1 71066650 3516073 2579057..2579317 1 NC_007204.1 hypothetical protein 2579317 3516073 Psyc_2096 Psychrobacter arcticus 273-4 hypothetical protein YP_265377.1 2579057 D 259536 CDS YP_265378.1 71066651 3516074 2579400..2579708 1 NC_007204.1 hypothetical protein 2579708 3516074 Psyc_2097 Psychrobacter arcticus 273-4 hypothetical protein YP_265378.1 2579400 D 259536 CDS YP_265379.1 71066652 3516085 2592265..2594199 1 NC_007204.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2594199 thrS 3516085 thrS Psychrobacter arcticus 273-4 threonyl-tRNA synthetase YP_265379.1 2592265 D 259536 CDS YP_265380.1 71066653 3516086 2594223..2594726 1 NC_007204.1 translation initiation factor 3 2594726 infC 3516086 infC Psychrobacter arcticus 273-4 translation initiation factor 3 YP_265380.1 2594223 D 259536 CDS YP_265381.1 71066654 3516087 2595088..2596332 1 NC_007204.1 hypothetical protein 2596332 3516087 Psyc_2100 Psychrobacter arcticus 273-4 hypothetical protein YP_265381.1 2595088 D 259536 CDS YP_265382.1 71066655 3516088 2596480..2598795 1 NC_007204.1 Its paralog in E. coli and H.influenzae is designated exoribonuclease II (Rnb). Both are Both these proteins share domain-level similarity (RNB, S1) with a considerable number of other proteins, and full-length similarity scoring below the trusted cutoff; RNAse R 2598795 vacB 3516088 vacB Psychrobacter arcticus 273-4 RNAse R YP_265382.1 2596480 D 259536 CDS YP_265383.1 71066656 3516089 complement(2599029..2599349) 1 NC_007204.1 COG3415; transposase and inactivated derivatives 2599349 3516089 Psyc_2102 Psychrobacter arcticus 273-4 transposase and inactivated derivatives YP_265383.1 2599029 R 259536 CDS YP_265384.1 71066657 3516090 complement(2599577..2600317) 1 NC_007204.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2600317 hisA 3516090 hisA Psychrobacter arcticus 273-4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_265384.1 2599577 R 259536 CDS YP_265385.1 71066658 3516091 2601248..2602600 1 NC_007204.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 2602600 3516091 Psyc_2104 Psychrobacter arcticus 273-4 Na(+)-translocating NADH-quinone reductase subunit A YP_265385.1 2601248 D 259536 CDS YP_265386.1 71066659 3516092 2602606..2603841 1 NC_007204.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 2603841 nqrB 3516092 nqrB Psychrobacter arcticus 273-4 Na(+)-translocating NADH-quinone reductase subunit B YP_265386.1 2602606 D 259536 CDS YP_265387.1 71066660 3516093 2603822..2604754 1 NC_007204.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 2604754 nqrC 3516093 nqrC Psychrobacter arcticus 273-4 Na(+)-translocating NADH-quinone reductase subunit C YP_265387.1 2603822 D 259536 CDS YP_265388.1 71066661 3516094 2604756..2605427 1 NC_007204.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 2605427 nqrD 3516094 nqrD Psychrobacter arcticus 273-4 Na(+)-translocating NADH-quinone reductase subunit D YP_265388.1 2604756 D 259536 CDS YP_265389.1 71066662 3516095 2605427..2606035 1 NC_007204.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 2606035 nqrE 3516095 nqrE Psychrobacter arcticus 273-4 Na(+)-translocating NADH-quinone reductase subunit E YP_265389.1 2605427 D 259536 CDS YP_265390.1 71066663 3516096 2606159..2607394 1 NC_007204.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 2607394 nqrF 3516096 nqrF Psychrobacter arcticus 273-4 Na(+)-translocating NADH-quinone reductase subunit F YP_265390.1 2606159 D 259536 CDS YP_265391.1 71066664 3516097 2607790..2608938 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.970) with cleavage site probability 0.607 at residue 41; thiamine biosynthesis lipoprotein 2608938 apbE 3516097 apbE Psychrobacter arcticus 273-4 thiamine biosynthesis lipoprotein YP_265391.1 2607790 D 259536 CDS YP_265392.1 71066665 3516098 2609102..2609347 1 NC_007204.1 hypothetical protein 2609347 3516098 Psyc_2111 Psychrobacter arcticus 273-4 hypothetical protein YP_265392.1 2609102 D 259536 CDS YP_265393.1 71066666 3516099 2609631..2610941 1 NC_007204.1 12 TM domains present; MFS cyanate efflux pump, CynX 2610941 cynX 3516099 cynX Psychrobacter arcticus 273-4 MFS cyanate efflux pump, CynX YP_265393.1 2609631 D 259536 CDS YP_265394.1 71066667 3516100 2611032..2611844 1 NC_007204.1 Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.938) with cleavage site probability 0.522 at residue 30; lipolytic protein 2611844 3516100 Psyc_2113 Psychrobacter arcticus 273-4 lipolytic protein YP_265394.1 2611032 D 259536 CDS YP_265395.1 71066668 3516101 2611841..2612530 1 NC_007204.1 efflux ABC transporter ATPase subunit 2612530 3516101 Psyc_2114 Psychrobacter arcticus 273-4 efflux ABC transporter ATPase subunit YP_265395.1 2611841 D 259536 CDS YP_265396.1 71066669 3516102 2612530..2615178 1 NC_007204.1 Possible transmembrane protein: 10 TM domains; possible lipid exporter; efflux ABC transporter inner membrane protein 2615178 3516102 Psyc_2115 Psychrobacter arcticus 273-4 efflux ABC transporter inner membrane protein YP_265396.1 2612530 D 259536 CDS YP_265397.1 71066670 3516103 complement(2615205..2615720) 1 NC_007204.1 hypothetical protein 2615720 3516103 Psyc_2116 Psychrobacter arcticus 273-4 hypothetical protein YP_265397.1 2615205 R 259536 CDS YP_265398.1 71066671 3516104 complement(2615721..2616572) 1 NC_007204.1 hypothetical protein 2616572 3516104 Psyc_2117 Psychrobacter arcticus 273-4 hypothetical protein YP_265398.1 2615721 R 259536 CDS YP_265399.1 71066672 3516105 2617101..2618432 1 NC_007204.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 2618432 avtA 3516105 avtA Psychrobacter arcticus 273-4 valine--pyruvate transaminase YP_265399.1 2617101 D 259536 CDS YP_265400.1 71066673 3516106 complement(2618497..2618871) 1 NC_007204.1 hypothetical protein 2618871 3516106 Psyc_2119 Psychrobacter arcticus 273-4 hypothetical protein YP_265400.1 2618497 R 259536 CDS YP_265401.1 71066674 3516107 complement(2619050..2619694) 1 NC_007204.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2619694 hisH 3516107 hisH Psychrobacter arcticus 273-4 imidazole glycerol phosphate synthase subunit HisH YP_265401.1 2619050 R 259536 CDS YP_265402.1 71066675 3516108 complement(2619695..2620360) 1 NC_007204.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 2620360 hisB 3516108 hisB Psychrobacter arcticus 273-4 imidazoleglycerol-phosphate dehydratase YP_265402.1 2619695 R 259536 CDS YP_265403.1 71066676 3516109 2620668..2621090 1 NC_007204.1 hypothetical protein 2621090 3516109 Psyc_2122 Psychrobacter arcticus 273-4 hypothetical protein YP_265403.1 2620668 D 259536 CDS YP_265404.1 71066677 3516111 2621469..2621969 1 NC_007204.1 hypothetical protein 2621969 3516111 Psyc_2123 Psychrobacter arcticus 273-4 hypothetical protein YP_265404.1 2621469 D 259536 CDS YP_265405.1 71066678 3516112 2622067..2622759 1 NC_007204.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 2622759 gph 3516112 gph Psychrobacter arcticus 273-4 phosphoglycolate phosphatase YP_265405.1 2622067 D 259536 CDS YP_265406.1 71066679 3516113 complement(2622772..2624322) 1 NC_007204.1 These proteins are a subset of the magnesium chelatase, ChlI subunit family, also called:hypothetical protein yifB and competence protein.; magnesium chelatase-related protein 2624322 3516113 Psyc_2125 Psychrobacter arcticus 273-4 magnesium chelatase-related protein YP_265406.1 2622772 R 259536 CDS YP_265407.1 71066680 3516114 2624627..2626171 1 NC_007204.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2626171 hemN 3516114 hemN Psychrobacter arcticus 273-4 coproporphyrinogen III oxidase YP_265407.1 2624627 D 259536 CDS YP_265408.1 71066681 3516115 complement(2626452..2627312) 1 NC_007204.1 hypothetical protein 2627312 3516115 Psyc_2127 Psychrobacter arcticus 273-4 hypothetical protein YP_265408.1 2626452 R 259536 CDS YP_265409.1 71066682 3516116 complement(2627328..2627825) 1 NC_007204.1 This protein contains a SURF1 domain and may be a membrane protein implicated in the regulation of membrane protease activity(COG1585). Two transmembrane helices predicted. RBS found.; hypothetical protein 2627825 3516116 Psyc_2128 Psychrobacter arcticus 273-4 hypothetical protein YP_265409.1 2627328 R 259536 CDS YP_265410.1 71066683 3516117 complement(2628250..2628891) 1 NC_007204.1 OmpA family protein 2628891 3516117 Psyc_2129 Psychrobacter arcticus 273-4 OmpA family protein YP_265410.1 2628250 R 259536 CDS YP_265411.1 71066684 3516118 2629098..2630330 1 NC_007204.1 8-amino-7-oxononanoate synthase 2630330 bioF 3516118 bioF Psychrobacter arcticus 273-4 8-amino-7-oxononanoate synthase YP_265411.1 2629098 D 259536 CDS YP_265412.1 71066685 3516119 2630408..2631232 1 NC_007204.1 biotin synthesis protein 2631232 bioC 3516119 bioC Psychrobacter arcticus 273-4 biotin synthesis protein YP_265412.1 2630408 D 259536 CDS YP_265413.1 71066686 3516120 complement(2631349..2633292) 1 NC_007204.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2633292 dnaK 3516120 dnaK Psychrobacter arcticus 273-4 molecular chaperone DnaK YP_265413.1 2631349 R 259536 CDS YP_265414.1 71066687 3516121 complement(2633587..2634186) 1 NC_007204.1 HSP70 family protein GrpE 2634186 3516121 Psyc_2133 Psychrobacter arcticus 273-4 HSP70 family protein GrpE YP_265414.1 2633587 R 259536 CDS YP_265415.1 71066688 3516122 complement(2634846..2635490) 1 NC_007204.1 This protein contains a yrdC domain that has been shown to preferentially bind to dsRNA (PFAM 01300). RBS found.; Citation: Teplova M, Tereshko V, Sanishvili R, Joachimiak A, Bushueva T, Anderson WF, Egli M. 2000. The structure of the yrdC gene product from Escherichia coli reveals a new fold and suggests a role in RNA binding. Protein Sci. 9(12):2557-66.; hypothetical protein 2635490 3516122 Psyc_2134 Psychrobacter arcticus 273-4 hypothetical protein YP_265415.1 2634846 R 259536 CDS YP_265416.1 71066689 3516123 complement(2635812..2637029) 1 NC_007204.1 DNA processing protein 2637029 dprA 3516123 dprA Psychrobacter arcticus 273-4 DNA processing protein YP_265416.1 2635812 R 259536 CDS YP_265417.1 71066690 3516124 complement(2637087..2638220) 1 NC_007204.1 This protein contains a LysM (lysin motif) domain. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. Signal peptide predicted. RBS found.; hypothetical protein 2638220 3516124 Psyc_2136 Psychrobacter arcticus 273-4 hypothetical protein YP_265417.1 2637087 R 259536 CDS YP_265418.1 71066691 3516125 complement(2638533..2639954) 1 NC_007204.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2639954 thrC 3516125 thrC Psychrobacter arcticus 273-4 threonine synthase YP_265418.1 2638533 R 259536 CDS YP_265419.1 71066692 3516126 complement(2640011..2641585) 1 NC_007204.1 This protein contains a NusB domain (involved in the regulation of rRNA biosynthesisby transcriptional antitermination, PFAM 01029) and a Sun protein domain (unknown function, PFAM 01189). RBS found.; hypothetical protein 2641585 3516126 Psyc_2138 Psychrobacter arcticus 273-4 hypothetical protein YP_265419.1 2640011 R 259536 CDS YP_265420.1 71066693 3516127 complement(2641656..2642741) 1 NC_007204.1 methionyl-tRNA formyltransferase 2642741 fmt 3516127 fmt Psychrobacter arcticus 273-4 methionyl-tRNA formyltransferase YP_265420.1 2641656 R 259536 CDS YP_265421.1 71066694 3516128 complement(2642977..2643648) 1 NC_007204.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2643648 ribE 3516128 ribE Psychrobacter arcticus 273-4 riboflavin synthase subunit alpha YP_265421.1 2642977 R 259536 CDS YP_265422.1 71066695 3516129 complement(2644038..2645093) 1 NC_007204.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 2645093 ribD 3516129 ribD Psychrobacter arcticus 273-4 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_265422.1 2644038 R 259536 CDS YP_265423.1 71066696 3516130 complement(2645192..2645650) 1 NC_007204.1 This protein contains an ATP cone domain (PFAM03477)that is an ATP-binding regulatory domain. RBS found.; transcriptional regulator NrdR 2645650 nrdR 3516130 nrdR Psychrobacter arcticus 273-4 transcriptional regulator NrdR YP_265423.1 2645192 R 259536 CDS YP_265424.1 71066697 3516131 complement(2645739..2647175) 1 NC_007204.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 2647175 trmE 3516131 trmE Psychrobacter arcticus 273-4 tRNA modification GTPase TrmE YP_265424.1 2645739 R 259536 CDS YP_265425.1 71066698 3516132 complement(2647569..2649266) 1 NC_007204.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 2649266 3516132 Psyc_2144 Psychrobacter arcticus 273-4 inner membrane protein translocase component YidC YP_265425.1 2647569 R 259536 CDS YP_265426.1 71066699 3516133 complement(2649484..2649858) 1 NC_007204.1 hypothetical protein 2649858 3516133 Psyc_2145 Psychrobacter arcticus 273-4 hypothetical protein YP_265426.1 2649484 R 259536 CDS YP_265427.1 71066700 3516134 complement(2649860..2650231) 1 NC_007204.1 In bacteria RNase P is known to be composed of two components: a large (about 400 base pairs) RNA (gene rnpB) and a small protein (119 to 133 amino acids) (gene rnpA).; ribonuclease P protein component 2650231 rnpA 3516134 rnpA Psychrobacter arcticus 273-4 ribonuclease P protein component YP_265427.1 2649860 R 259536 CDS YP_265428.1 71066701 3516135 complement(2650418..2650552) 1 NC_007204.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 2650552 rpmH 3516135 rpmH Psychrobacter arcticus 273-4 50S ribosomal protein L34 YP_265428.1 2650418 R 259536 CDS