-- dump date 20140620_020748 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 259536000001 SEQ_END SEQ_END NC_007204.1 2650701 2650701 DR NC_007204.1; contig end 2650701..2650701 Psychrobacter arcticus 273-4 YP_263309.1 CDS dnaA NC_007204.1 520 1965 D DnaA is an ATP- and DNA-binding protein. It binds specifically to 9 bp nucleotide repeats known as dnaA boxes which are found in the chromosome origin of replication (oriC).; Citation: Skarstad K and Boye E. 1994. The initiator protein DnaA: evolution, properties and function. Biochim Biophys Acta. 1217(2):111-30.; chromosome replication initiator DnaA 520..1965 Psychrobacter arcticus 273-4 3514718 YP_263310.1 CDS dnaN NC_007204.1 2125 3300 D A dimer of the beta subunit of DNA polymerase forms a ring which encircles duplex DNA.; Citation: Kong XP, Onrust R, O'Donnell M, Kuriyan J. 1992. Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp. Cell. 69:425-437.; DNA polymerase III subunit beta 2125..3300 Psychrobacter arcticus 273-4 3514719 YP_263311.1 CDS recF NC_007204.1 3463 4677 D DNA replication and repair protein RecF 3463..4677 Psychrobacter arcticus 273-4 3514720 YP_263312.1 CDS gyrB NC_007204.1 5179 7794 D DNA gyrase is a type II topoisomerase that catalyses an ATP-dependent 2 strand cleavage of DNA.; DNA gyrase subunit B 5179..7794 Psychrobacter arcticus 273-4 3514721 YP_263313.1 CDS Psyc_0005 NC_007204.1 7907 8500 D Possible transmembrane protein: 6 TM domains; hypothetical protein 7907..8500 Psychrobacter arcticus 273-4 3514686 YP_263314.1 CDS Psyc_0006 NC_007204.1 8586 9371 R IS3 family transposase complement(8586..9371) Psychrobacter arcticus 273-4 3514687 YP_263315.1 CDS Psyc_0007 NC_007204.1 9413 9931 R IS3/IS911 family transposase orfA complement(9413..9931) Psychrobacter arcticus 273-4 3514688 YP_263316.1 CDS Psyc_0008 NC_007204.1 10178 11215 R SAM-dependent methyltransferase complement(10178..11215) Psychrobacter arcticus 273-4 3514689 YP_263317.1 CDS guaA NC_007204.1 11806 13416 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 11806..13416 Psychrobacter arcticus 273-4 3514690 YP_263318.1 CDS Psyc_0010 NC_007204.1 13573 14865 D hypothetical protein 13573..14865 Psychrobacter arcticus 273-4 3514691 YP_263319.1 CDS Psyc_0011 NC_007204.1 14993 15997 R Zinc-containing alcohol dehydrogenase complement(14993..15997) Psychrobacter arcticus 273-4 3514692 YP_263320.1 CDS Psyc_0012 NC_007204.1 16221 17198 R nuclear receptor-binding factor-like protein complement(16221..17198) Psychrobacter arcticus 273-4 3514693 YP_263321.1 CDS Psyc_0013 NC_007204.1 17341 17595 R hypothetical protein complement(17341..17595) Psychrobacter arcticus 273-4 3514694 YP_263322.1 CDS Psyc_0014 NC_007204.1 18119 19162 R 2-nitropropane dioxygenase complement(18119..19162) Psychrobacter arcticus 273-4 3514695 YP_263323.1 CDS Psyc_0015 NC_007204.1 19335 20621 R No RBS found.; hypothetical protein complement(19335..20621) Psychrobacter arcticus 273-4 3514696 YP_263324.1 CDS Psyc_0016 NC_007204.1 20634 20930 D IS3/IS911 family transposase OrfA 20634..20930 Psychrobacter arcticus 273-4 3514697 YP_263325.1 CDS Psyc_0017 NC_007204.1 20981 21799 D IS30 family transposase 20981..21799 Psychrobacter arcticus 273-4 3514698 YP_263326.1 CDS Psyc_0018 NC_007204.1 21800 22450 R hypothetical protein complement(21800..22450) Psychrobacter arcticus 273-4 3514699 YP_263327.1 CDS Psyc_0019 NC_007204.1 22443 22952 R similar to Burkholderia pseudomallei hypothetical protein BPSL0749; hypothetical protein complement(22443..22952) Psychrobacter arcticus 273-4 3514700 YP_263328.1 CDS Psyc_0020 NC_007204.1 22945 23997 R RBS found.; hypothetical protein complement(22945..23997) Psychrobacter arcticus 273-4 3514701 YP_263329.1 CDS Psyc_0021 NC_007204.1 24177 24554 R This protein may be a peroxiredoxin, COG2044. RBS found.; hypothetical protein complement(24177..24554) Psychrobacter arcticus 273-4 3514702 YP_263330.1 CDS Psyc_0022 NC_007204.1 24825 25877 R This protein may contain an alpha/beta-hydrolase fold (COG0429) and an esterase/lipase/thioesterase active site (PS50187). RBS found.; hypothetical protein complement(24825..25877) Psychrobacter arcticus 273-4 3514703 YP_263331.1 CDS Psyc_0023 NC_007204.1 26178 26774 R RBS found.; hypothetical protein complement(26178..26774) Psychrobacter arcticus 273-4 3514704 YP_263332.1 CDS Psyc_0024 NC_007204.1 26978 27697 D ribosomal small subunit pseudouridine synthase A 26978..27697 Psychrobacter arcticus 273-4 3514760 YP_263333.1 CDS Psyc_0025 NC_007204.1 28179 29264 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.996 at residue 24; hypothetical protein 28179..29264 Psychrobacter arcticus 273-4 3514761 YP_263334.1 CDS Psyc_0026 NC_007204.1 29409 30059 R hypothetical protein complement(29409..30059) Psychrobacter arcticus 273-4 3514762 YP_263335.1 CDS Psyc_0027 NC_007204.1 30543 31667 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 30543..31667 Psychrobacter arcticus 273-4 3514763 YP_263336.1 CDS dapB NC_007204.1 31996 32832 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 31996..32832 Psychrobacter arcticus 273-4 3514764 YP_263337.1 CDS Psyc_0029 NC_007204.1 32915 34090 R ornithine decarboxylase complement(32915..34090) Psychrobacter arcticus 273-4 3514765 YP_263338.1 CDS def NC_007204.1 34198 34752 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(34198..34752) Psychrobacter arcticus 273-4 3514766 YP_263339.1 CDS Psyc_0031 NC_007204.1 35124 35378 R Signal peptide and 3 transmembrane helices predicted. RBS found.; hypothetical protein complement(35124..35378) Psychrobacter arcticus 273-4 3514767 YP_263340.1 CDS mpl NC_007204.1 35713 37230 R UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(35713..37230) Psychrobacter arcticus 273-4 3514768 YP_263341.1 CDS Psyc_0033 NC_007204.1 37523 38146 R hypothetical protein complement(37523..38146) Psychrobacter arcticus 273-4 3514769 YP_263342.1 CDS dsbB NC_007204.1 38341 38871 R disulfide bond formation protein complement(38341..38871) Psychrobacter arcticus 273-4 3514770 YP_263343.1 CDS gshA NC_007204.1 38926 40509 R glutamate-cysteine ligase complement(38926..40509) Psychrobacter arcticus 273-4 3514771 YP_263344.1 CDS Psyc_0036 NC_007204.1 40901 41281 R essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA complement(40901..41281) Psychrobacter arcticus 273-4 3514772 YP_263345.1 CDS Psyc_0037 NC_007204.1 41787 43805 D ABC transporter ATPase 41787..43805 Psychrobacter arcticus 273-4 3514773 YP_263346.1 CDS rlpA NC_007204.1 43911 44279 R Lipoprotein conserved domain; lipoprotein A complement(43911..44279) Psychrobacter arcticus 273-4 3514774 YP_263347.1 CDS Psyc_0039 NC_007204.1 44824 45822 D molecular chaperone DnaJ 44824..45822 Psychrobacter arcticus 273-4 3514775 YP_263348.1 CDS Psyc_0040 NC_007204.1 45908 46231 D hypothetical protein 45908..46231 Psychrobacter arcticus 273-4 3514776 YP_263349.1 CDS sstT NC_007204.1 46320 47522 R involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT complement(46320..47522) Psychrobacter arcticus 273-4 3514777 YP_263350.1 CDS holC NC_007204.1 47861 48319 R Chi forms a 1:1 heterodimer with psi. The chi:psi complex functions by increasing the affinity of tau and gamma for delta.delta allowing a functional clamp-loading complex to form at physiological subunit concentrations.; DNA polymerase III subunit chi complement(47861..48319) Psychrobacter arcticus 273-4 3514778 YP_263351.1 CDS pepA NC_007204.1 48355 50013 R PepA aminopeptidase complement(48355..50013) Psychrobacter arcticus 273-4 3514779 YP_263352.1 CDS Psyc_0044 NC_007204.1 50261 50866 R isochorismatase hydrolase complement(50261..50866) Psychrobacter arcticus 273-4 3514609 YP_263353.1 CDS Psyc_0045 NC_007204.1 51384 52634 D hypothetical protein 51384..52634 Psychrobacter arcticus 273-4 3514610 YP_263354.1 CDS Psyc_0046 NC_007204.1 52634 53842 D hypothetical protein 52634..53842 Psychrobacter arcticus 273-4 3514611 YP_263355.1 CDS Psyc_0047 NC_007204.1 53920 54528 R Possible 16S RNA G1207 methylase RsmC (COG2813). RBS found.; hypothetical protein complement(53920..54528) Psychrobacter arcticus 273-4 3514612 YP_263356.1 CDS Psyc_0048 NC_007204.1 55288 55752 R Signal peptide and 5 transmembrane helices predicted.; hypothetical protein complement(55288..55752) Psychrobacter arcticus 273-4 3514613 YP_263357.1 CDS Psyc_0049 NC_007204.1 55758 56192 R Signal peptide and 5 transmembrane helices predicted. RBS found.; hypothetical protein complement(55758..56192) Psychrobacter arcticus 273-4 3514614 YP_263358.1 CDS Psyc_0050 NC_007204.1 56291 57226 D LysR family transcriptional regulator 56291..57226 Psychrobacter arcticus 273-4 3514615 YP_263359.1 CDS Psyc_0051 NC_007204.1 57548 59107 D hypothetical protein 57548..59107 Psychrobacter arcticus 273-4 3514616 YP_263360.1 CDS xerD NC_007204.1 59255 60193 R phage integrase complement(59255..60193) Psychrobacter arcticus 273-4 3514617 YP_263361.1 CDS Psyc_0053 NC_007204.1 60448 61662 R This protein contains a SAM (and some other nucleotide) binding motif. RBS found.; hypothetical protein complement(60448..61662) Psychrobacter arcticus 273-4 3514618 YP_263362.1 CDS Psyc_0054 NC_007204.1 61869 62129 R Possible redox protein regulator of disulfide bond formation, Sir A. RBS found.; hypothetical protein complement(61869..62129) Psychrobacter arcticus 273-4 3514619 YP_263363.1 CDS Psyc_0055 NC_007204.1 62205 62717 R hypothetical protein complement(62205..62717) Psychrobacter arcticus 273-4 3514620 YP_263364.1 CDS Psyc_0056 NC_007204.1 62796 63329 R This protein contains a ribonuclease RNase H fold (COG0816). RBS found.; hypothetical protein complement(62796..63329) Psychrobacter arcticus 273-4 3514621 YP_263365.1 CDS algH NC_007204.1 63380 63943 R contains DNA binding region also has domain hit to protein DUF 179; transcriptional regulator complement(63380..63943) Psychrobacter arcticus 273-4 3514622 YP_263366.1 CDS recN NC_007204.1 64062 65741 R DNA repair protein complement(64062..65741) Psychrobacter arcticus 273-4 3514623 YP_263367.1 CDS Psyc_0059 NC_007204.1 66427 66762 D hypothetical protein 66427..66762 Psychrobacter arcticus 273-4 3514624 YP_263368.1 CDS Psyc_0060 NC_007204.1 66968 67738 D RNA methyltransferase 66968..67738 Psychrobacter arcticus 273-4 3514625 YP_263369.1 CDS coaE NC_007204.1 67701 68393 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(67701..68393) Psychrobacter arcticus 273-4 3514626 YP_263370.1 CDS pilD NC_007204.1 68477 69376 R type 4 prepilin peptidase 1 complement(68477..69376) Psychrobacter arcticus 273-4 3514627 YP_263371.1 CDS pilC NC_007204.1 69402 70625 R pilin secretion/fimbrial assembly system protein, PilC complement(69402..70625) Psychrobacter arcticus 273-4 3514149 YP_263372.1 CDS pilB NC_007204.1 70862 72637 R pilin secretion/fimbrial assembly system protein, PilB complement(70862..72637) Psychrobacter arcticus 273-4 3514150 YP_263373.1 CDS tpiA NC_007204.1 73127 73936 D triosephosphate isomerase 73127..73936 Psychrobacter arcticus 273-4 3514151 YP_263374.1 CDS secG NC_007204.1 74165 74473 D preprotein translocase subunit SecG 74165..74473 Psychrobacter arcticus 273-4 3514152 YP_263375.1 CDS Psyc_0067 NC_007204.1 75377 75877 D hypothetical protein 75377..75877 Psychrobacter arcticus 273-4 3514155 YP_263376.1 CDS nusA NC_007204.1 76010 77494 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 76010..77494 Psychrobacter arcticus 273-4 3514156 YP_263377.1 CDS infB NC_007204.1 77646 80372 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 77646..80372 Psychrobacter arcticus 273-4 3514157 YP_263378.1 CDS rbfA NC_007204.1 80587 80991 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 80587..80991 Psychrobacter arcticus 273-4 3514158 YP_263379.1 CDS truB NC_007204.1 81008 82150 D 100 aa longer than homologs returned from blastp; tRNA pseudouridine synthase B 81008..82150 Psychrobacter arcticus 273-4 3514159 YP_263380.1 CDS Psyc_0072 NC_007204.1 82492 82677 D hypothetical protein 82492..82677 Psychrobacter arcticus 273-4 3514160 YP_263381.1 CDS rpsO NC_007204.1 83015 83281 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 83015..83281 Psychrobacter arcticus 273-4 3514161 YP_263382.1 CDS pnp NC_007204.1 83907 86009 D polynucleotide phosphorylase 83907..86009 Psychrobacter arcticus 273-4 3514162 YP_263383.1 CDS Psyc_0075 NC_007204.1 86116 86397 R hypothetical protein complement(86116..86397) Psychrobacter arcticus 273-4 3514163 YP_263384.1 CDS Psyc_0076 NC_007204.1 86461 87066 R hypothetical protein complement(86461..87066) Psychrobacter arcticus 273-4 3514164 YP_263385.1 CDS Psyc_0077 NC_007204.1 87218 87472 R hypothetical protein complement(87218..87472) Psychrobacter arcticus 273-4 3514165 YP_263386.1 CDS prlC NC_007204.1 87473 89698 R oligopeptidase A complement(87473..89698) Psychrobacter arcticus 273-4 3514166 YP_263387.1 CDS Psyc_0079 NC_007204.1 90323 91435 D hypothetical protein 90323..91435 Psychrobacter arcticus 273-4 3514667 YP_263388.1 CDS Psyc_0080 NC_007204.1 91496 92404 D hypothetical protein 91496..92404 Psychrobacter arcticus 273-4 3514668 YP_263389.1 CDS Psyc_0081 NC_007204.1 92464 93462 D hypothetical protein 92464..93462 Psychrobacter arcticus 273-4 3514669 YP_263390.1 CDS alkB NC_007204.1 93498 94115 R DNA-N1-methyladenine dioxygenase complement(93498..94115) Psychrobacter arcticus 273-4 3514670 YP_263391.1 CDS Psyc_0083 NC_007204.1 94165 96078 R eflux ABC transporter inner membrane protein complement(94165..96078) Psychrobacter arcticus 273-4 3514671 YP_263392.1 CDS Psyc_0084 NC_007204.1 96361 97209 D hypothetical protein 96361..97209 Psychrobacter arcticus 273-4 3514672 YP_263393.1 CDS Psyc_0085 NC_007204.1 97383 98273 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 97383..98273 Psychrobacter arcticus 273-4 3514673 YP_263394.1 CDS thiC NC_007204.1 98385 100460 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(98385..100460) Psychrobacter arcticus 273-4 3514674 YP_263395.1 CDS Psyc_0087 NC_007204.1 100903 101193 R RBS found.; hypothetical protein complement(100903..101193) Psychrobacter arcticus 273-4 3514675 YP_263396.1 CDS argH NC_007204.1 101502 102875 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(101502..102875) Psychrobacter arcticus 273-4 3514676 YP_263397.1 CDS hemC NC_007204.1 103385 104422 D hydroxymethylbilane synthase 103385..104422 Psychrobacter arcticus 273-4 3514677 YP_263398.1 CDS hemD NC_007204.1 104539 105522 D uroporphyrinogen-III synthase 104539..105522 Psychrobacter arcticus 273-4 3514678 YP_263399.1 CDS Psyc_0091 NC_007204.1 105653 106612 D hypothetical protein 105653..106612 Psychrobacter arcticus 273-4 3514679 YP_263400.1 CDS Psyc_0092 NC_007204.1 106671 107156 D hypothetical protein 106671..107156 Psychrobacter arcticus 273-4 3514680 YP_263401.1 CDS ribB NC_007204.1 107401 108513 R GTP cyclohydrolase II complement(107401..108513) Psychrobacter arcticus 273-4 3514681 YP_263402.1 CDS Psyc_0094 NC_007204.1 108765 110054 R recombination factor protein RarA complement(108765..110054) Psychrobacter arcticus 273-4 3514682 YP_263403.1 CDS Psyc_0095 NC_007204.1 110387 110878 D hypothetical protein 110387..110878 Psychrobacter arcticus 273-4 3514683 YP_263404.1 CDS Psyc_0096 NC_007204.1 110986 111837 D hypothetical protein 110986..111837 Psychrobacter arcticus 273-4 3514684 YP_263405.1 CDS gltA NC_007204.1 111902 113182 R citrate synthase complement(111902..113182) Psychrobacter arcticus 273-4 3514685 YP_263406.1 CDS sdhC NC_007204.1 114223 114609 D succinate dehydrogenase subunit C 114223..114609 Psychrobacter arcticus 273-4 3514468 YP_263407.1 CDS sdhD NC_007204.1 114609 115013 D succinate dehydrogenase subunit D 114609..115013 Psychrobacter arcticus 273-4 3514469 YP_263408.1 CDS sdhA NC_007204.1 115192 117042 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 115192..117042 Psychrobacter arcticus 273-4 3514470 YP_263409.1 CDS sdhB NC_007204.1 117251 117961 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 117251..117961 Psychrobacter arcticus 273-4 3514471 YP_263410.1 CDS sucA NC_007204.1 119047 121932 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 119047..121932 Psychrobacter arcticus 273-4 3514472 YP_263411.1 CDS sucB NC_007204.1 122097 123329 D 2-oxoglutarate dehydrogenase E2 122097..123329 Psychrobacter arcticus 273-4 3514473 YP_263412.1 CDS lpdG NC_007204.1 123590 125041 D E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 123590..125041 Psychrobacter arcticus 273-4 3514474 YP_263413.1 CDS sucC NC_007204.1 125228 126394 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 125228..126394 Psychrobacter arcticus 273-4 3514475 YP_263414.1 CDS Psyc_0106 NC_007204.1 126500 127375 D succinyl-CoA synthetase subunit alpha 126500..127375 Psychrobacter arcticus 273-4 3514476 YP_263415.1 CDS galE NC_007204.1 127483 128514 D UDP-galactose 4-epimerase 127483..128514 Psychrobacter arcticus 273-4 3514477 YP_263416.1 CDS galU NC_007204.1 128569 129453 D UDP-glucose pyrophosphorylase 128569..129453 Psychrobacter arcticus 273-4 3514478 YP_263417.1 CDS pgi NC_007204.1 129457 131124 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 129457..131124 Psychrobacter arcticus 273-4 3514479 YP_263418.1 CDS Psyc_0110 NC_007204.1 131165 132595 D hypothetical protein 131165..132595 Psychrobacter arcticus 273-4 3514480 YP_263419.1 CDS cpsG NC_007204.1 132855 134336 R phosphomannomutase complement(132855..134336) Psychrobacter arcticus 273-4 3514481 YP_263420.1 CDS mazG NC_007204.1 134490 135356 D functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 134490..135356 Psychrobacter arcticus 273-4 3514482 YP_263421.1 CDS comEA NC_007204.1 135367 135714 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.995) with cleavage site probability 0.936 at residue 24; competence DNA binding protein ComEA 135367..135714 Psychrobacter arcticus 273-4 3514483 YP_263422.1 CDS Psyc_0114 NC_007204.1 135879 138116 D hypothetical protein 135879..138116 Psychrobacter arcticus 273-4 3514484 YP_263423.1 CDS folK NC_007204.1 138151 138732 D 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 138151..138732 Psychrobacter arcticus 273-4 3514485 YP_263424.1 CDS panB NC_007204.1 138792 139592 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 138792..139592 Psychrobacter arcticus 273-4 3514486 YP_263425.1 CDS panC NC_007204.1 139644 140510 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 139644..140510 Psychrobacter arcticus 273-4 3514487 YP_263426.1 CDS Psyc_0118 NC_007204.1 140567 141529 D hypothetical protein 140567..141529 Psychrobacter arcticus 273-4 3514722 YP_263427.1 CDS Psyc_0119 NC_007204.1 141597 142109 D hypothetical protein 141597..142109 Psychrobacter arcticus 273-4 3514723 YP_263428.1 CDS Psyc_0120 NC_007204.1 142426 143046 R hypothetical protein complement(142426..143046) Psychrobacter arcticus 273-4 3514724 YP_263429.1 CDS ubiG NC_007204.1 143562 144392 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 143562..144392 Psychrobacter arcticus 273-4 3514725 YP_263430.1 CDS Psyc_0122 NC_007204.1 144428 145138 D haloacid dehalogenase 144428..145138 Psychrobacter arcticus 273-4 3514726 YP_263431.1 CDS Psyc_0123 NC_007204.1 145243 146130 D short chain dehydrogenase 145243..146130 Psychrobacter arcticus 273-4 3514727 YP_263432.1 CDS Psyc_0124 NC_007204.1 146254 146520 D Citation: Brown L, Gentry D, Elliott T, Cashel M (2002). DksA affects ppGpp induction of RpoS at a translational level. J Bacteriol 184(16);4455-65. PMID: 12142416; hypothetical protein 146254..146520 Psychrobacter arcticus 273-4 3514728 YP_263433.1 CDS Psyc_0125 NC_007204.1 146719 147828 R This protein shows low homology to the cobalamin synthesis protein/P47K family (PFAM cobW). No RBS was found.; hypothetical protein complement(146719..147828) Psychrobacter arcticus 273-4 3514729 YP_263434.1 CDS ompR NC_007204.1 147959 148723 R part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator complement(147959..148723) Psychrobacter arcticus 273-4 3514730 YP_263435.1 CDS Psyc_0127 NC_007204.1 149143 151665 D hypothetical protein 149143..151665 Psychrobacter arcticus 273-4 3514731 YP_263436.1 CDS Psyc_0128 NC_007204.1 151802 152296 R hypothetical protein complement(151802..152296) Psychrobacter arcticus 273-4 3514732 YP_263437.1 CDS Psyc_0129 NC_007204.1 152743 154041 R RBS found.; hypothetical protein complement(152743..154041) Psychrobacter arcticus 273-4 3514733 YP_263438.1 CDS Psyc_0130 NC_007204.1 154478 154633 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.198 at residue 28; hypothetical protein 154478..154633 Psychrobacter arcticus 273-4 3514734 YP_263439.1 CDS phhB NC_007204.1 154919 155212 R pterin-4-alpha-carbinolamine dehydratase complement(154919..155212) Psychrobacter arcticus 273-4 3514735 YP_263440.1 CDS Psyc_0132 NC_007204.1 155523 155816 R RBS found.; hypothetical protein complement(155523..155816) Psychrobacter arcticus 273-4 3514736 YP_263441.1 CDS Psyc_0133 NC_007204.1 156306 157967 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 156306..157967 Psychrobacter arcticus 273-4 3514737 YP_263442.1 CDS Psyc_0134 NC_007204.1 158102 160894 R PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase complement(158102..160894) Psychrobacter arcticus 273-4 3514738 YP_263443.1 CDS Psyc_0135 NC_007204.1 161278 161766 D hypothetical protein 161278..161766 Psychrobacter arcticus 273-4 3514739 YP_263444.1 CDS Psyc_0136 NC_007204.1 161842 162216 D hypothetical protein 161842..162216 Psychrobacter arcticus 273-4 3514740 YP_263445.1 CDS Psyc_0137 NC_007204.1 162300 164120 R acyl-CoA dehydrogenase complement(162300..164120) Psychrobacter arcticus 273-4 3514503 YP_263446.1 CDS Psyc_0138 NC_007204.1 164664 165791 D hypothetical protein 164664..165791 Psychrobacter arcticus 273-4 3514504 YP_263447.1 CDS aroE NC_007204.1 165855 166721 R shikimate dehydrogenase complement(165855..166721) Psychrobacter arcticus 273-4 3514505 YP_263448.1 CDS Psyc_0140 NC_007204.1 167146 167811 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.990) with cleavage site probability 0.982 at residue 24; hypothetical protein 167146..167811 Psychrobacter arcticus 273-4 3514506 YP_263449.1 CDS Psyc_0141 NC_007204.1 167815 168774 D aminodeoxychorismate lyase 167815..168774 Psychrobacter arcticus 273-4 3514507 YP_263450.1 CDS Psyc_0142 NC_007204.1 168785 168985 R hypothetical protein complement(168785..168985) Psychrobacter arcticus 273-4 3514508 YP_263451.1 CDS dpnC NC_007204.1 169265 170029 R type II restriction endonuclease DpnI complement(169265..170029) Psychrobacter arcticus 273-4 3514509 YP_263452.1 CDS Psyc_0144 NC_007204.1 170201 171484 D hypothetical protein 170201..171484 Psychrobacter arcticus 273-4 3514510 YP_263453.1 CDS tmk NC_007204.1 171585 172262 D thymidylate kinase 171585..172262 Psychrobacter arcticus 273-4 3514511 YP_263454.1 CDS Psyc_0146 NC_007204.1 172382 174673 R CPA1 family Na(+)/H(+) antiporter complement(172382..174673) Psychrobacter arcticus 273-4 3514512 YP_263455.1 CDS mucD NC_007204.1 175485 176942 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.993) with cleavage site probability 0.989 at residue 47; serine protease 175485..176942 Psychrobacter arcticus 273-4 3514513 YP_263456.1 CDS dapA NC_007204.1 177480 178385 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 177480..178385 Psychrobacter arcticus 273-4 3514514 YP_263457.1 CDS Psyc_0149 NC_007204.1 178400 178735 D hypothetical protein 178400..178735 Psychrobacter arcticus 273-4 3514515 YP_263458.1 CDS purC NC_007204.1 178866 179579 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 178866..179579 Psychrobacter arcticus 273-4 3514516 YP_263459.1 CDS Psyc_0151 NC_007204.1 179656 179997 R hypothetical protein complement(179656..179997) Psychrobacter arcticus 273-4 3514517 YP_263460.1 CDS Psyc_0153 NC_007204.1 180603 180914 D hypothetical protein 180603..180914 Psychrobacter arcticus 273-4 3514519 YP_263461.1 CDS Psyc_0154 NC_007204.1 180969 181190 R hypothetical protein complement(180969..181190) Psychrobacter arcticus 273-4 3514520 YP_263462.1 CDS Psyc_0155 NC_007204.1 181490 181732 R hypothetical protein complement(181490..181732) Psychrobacter arcticus 273-4 3514521 YP_263463.1 CDS Psyc_0156 NC_007204.1 181933 182136 R RBS found.; hypothetical protein complement(181933..182136) Psychrobacter arcticus 273-4 3515116 YP_263464.1 CDS Psyc_0157 NC_007204.1 182604 182855 D hypothetical protein 182604..182855 Psychrobacter arcticus 273-4 3515117 YP_263465.1 CDS dadA NC_007204.1 182842 184173 R D-amino acid dehydrogenase subunit complement(182842..184173) Psychrobacter arcticus 273-4 3515118 YP_263466.1 CDS Psyc_0159 NC_007204.1 184228 184995 R hypothetical protein complement(184228..184995) Psychrobacter arcticus 273-4 3515119 YP_263467.1 CDS phnA NC_007204.1 185292 185645 D Phosphonoacetate hydrolase PhnA is a novel carbon-phosphorus bond cleavage enzyme. The phnA gene is part of a large operon in Escherichia coli associated with alkylphosphonate uptake and carbon-phosphorus bond cleavage.; PhnA protein 185292..185645 Psychrobacter arcticus 273-4 3515120 YP_263468.1 CDS hemL NC_007204.1 185744 187045 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 185744..187045 Psychrobacter arcticus 273-4 3515121 YP_263469.1 CDS Psyc_0162 NC_007204.1 187480 189006 D exopolyphosphatase 187480..189006 Psychrobacter arcticus 273-4 3515122 YP_263470.1 CDS Psyc_0163 NC_007204.1 189235 190038 D acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 189235..190038 Psychrobacter arcticus 273-4 3515123 YP_263471.1 CDS Psyc_0164 NC_007204.1 190316 191893 D hypothetical protein 190316..191893 Psychrobacter arcticus 273-4 3515124 YP_263472.1 CDS proC NC_007204.1 192082 192915 D pyrroline-5-carboxylate reductase 192082..192915 Psychrobacter arcticus 273-4 3515125 YP_263473.1 CDS Psyc_0166 NC_007204.1 193038 193607 D hypothetical protein 193038..193607 Psychrobacter arcticus 273-4 3515126 YP_263474.1 CDS thiD NC_007204.1 193860 194654 R phosphomethylpyrimidine kinase complement(193860..194654) Psychrobacter arcticus 273-4 3515127 YP_263475.1 CDS Psyc_0168 NC_007204.1 195455 196129 D hypothetical protein 195455..196129 Psychrobacter arcticus 273-4 3515130 YP_263476.1 CDS panD NC_007204.1 196376 196756 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(196376..196756) Psychrobacter arcticus 273-4 3515131 YP_263477.1 CDS pth NC_007204.1 196856 197437 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(196856..197437) Psychrobacter arcticus 273-4 3515132 YP_263478.1 CDS Psyc_0171 NC_007204.1 197634 198308 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(197634..198308) Psychrobacter arcticus 273-4 3514206 YP_263479.1 CDS prsA NC_007204.1 198705 199652 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(198705..199652) Psychrobacter arcticus 273-4 3514207 YP_263480.1 CDS ipk NC_007204.1 200407 201375 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(200407..201375) Psychrobacter arcticus 273-4 3514210 YP_263481.1 CDS Psyc_0174 NC_007204.1 201438 202076 R hypothetical protein complement(201438..202076) Psychrobacter arcticus 273-4 3514211 YP_263482.1 CDS Psyc_0175 NC_007204.1 202218 203882 R hypothetical protein complement(202218..203882) Psychrobacter arcticus 273-4 3514212 YP_263483.1 CDS hemA NC_007204.1 204616 205995 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 204616..205995 Psychrobacter arcticus 273-4 3514213 YP_263484.1 CDS agxT NC_007204.1 206442 207578 D serine-pyruvate aminotransferase 206442..207578 Psychrobacter arcticus 273-4 3514214 YP_263485.1 CDS Psyc_0178 NC_007204.1 207814 208251 D hypothetical protein 207814..208251 Psychrobacter arcticus 273-4 3514215 YP_263486.1 CDS Psyc_0179 NC_007204.1 208344 208766 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.953) with cleavage site probability 0.501 at residue 23; hypothetical protein 208344..208766 Psychrobacter arcticus 273-4 3514216 YP_263487.1 CDS Psyc_0180 NC_007204.1 208866 210530 R The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; AMP-dependent synthetase/ligase complement(208866..210530) Psychrobacter arcticus 273-4 3514217 YP_263488.1 CDS fadH2 NC_007204.1 210870 213005 D 2,4-dienoyl-CoA reductase 210870..213005 Psychrobacter arcticus 273-4 3514218 YP_263489.1 CDS nemA NC_007204.1 213389 214492 D FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; N-ethylmaleimide reductase 213389..214492 Psychrobacter arcticus 273-4 3514219 YP_263490.1 CDS Psyc_0183 NC_007204.1 214749 216065 R Member of TIGR00275 family of proteins. RBS found.; hypothetical protein complement(214749..216065) Psychrobacter arcticus 273-4 3514220 YP_263491.1 CDS acs NC_007204.1 216448 218409 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 216448..218409 Psychrobacter arcticus 273-4 3514221 YP_263492.1 CDS pgsA NC_007204.1 219109 219789 D CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 219109..219789 Psychrobacter arcticus 273-4 3514222 YP_263493.1 CDS Psyc_0186 NC_007204.1 220074 220568 R This protein has some homology to general stress protein 26 (COG3871). RBS found.; hypothetical protein complement(220074..220568) Psychrobacter arcticus 273-4 3514522 YP_263494.1 CDS purL NC_007204.1 220986 225014 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 220986..225014 Psychrobacter arcticus 273-4 3514523 YP_263495.1 CDS Psyc_0188 NC_007204.1 225212 225685 D hypothetical protein 225212..225685 Psychrobacter arcticus 273-4 3514524 YP_263496.1 CDS Psyc_0189 NC_007204.1 225740 227497 R hypothetical protein complement(225740..227497) Psychrobacter arcticus 273-4 3514525 YP_263497.1 CDS Psyc_0190 NC_007204.1 227710 227889 D hypothetical protein 227710..227889 Psychrobacter arcticus 273-4 3514526 YP_263498.1 CDS Psyc_0191 NC_007204.1 228171 228800 D alkaline phosphatase 228171..228800 Psychrobacter arcticus 273-4 3514527 YP_263499.1 CDS Psyc_0192 NC_007204.1 229127 229267 R High homology to COG3328, yet very short sequence.; transposase and inactivated derivatives complement(229127..229267) Psychrobacter arcticus 273-4 3514528 YP_263500.1 CDS Psyc_0193 NC_007204.1 229310 230866 R contains a TerC, 2 CBS and 1 CorC domains; TerC family transport protein complement(229310..230866) Psychrobacter arcticus 273-4 3514529 YP_263501.1 CDS Psyc_0194 NC_007204.1 231329 231742 R Member of bacterial family of proteins related to iojap from plants. The gene iojap is a pattern-striping gene in maize. RBS found.; hypothetical protein complement(231329..231742) Psychrobacter arcticus 273-4 3514530 YP_263502.1 CDS nadD NC_007204.1 231882 232766 R nicotinate-nucleotide adenylyltransferase complement(231882..232766) Psychrobacter arcticus 273-4 3514531 YP_263503.1 CDS Psyc_0196 NC_007204.1 233099 235255 R catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase complement(233099..235255) Psychrobacter arcticus 273-4 3514532 YP_263504.1 CDS Psyc_0197 NC_007204.1 235349 236581 R acetate kinase complement(235349..236581) Psychrobacter arcticus 273-4 3514533 YP_263505.1 CDS Psyc_0198 NC_007204.1 237088 237513 D Two transmembrane helices predicted.; hypothetical protein 237088..237513 Psychrobacter arcticus 273-4 3514534 YP_263506.1 CDS lysA NC_007204.1 237623 238954 D diaminopimelate decarboxylase 237623..238954 Psychrobacter arcticus 273-4 3514535 YP_263507.1 CDS dapF NC_007204.1 239291 240178 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 239291..240178 Psychrobacter arcticus 273-4 3514536 YP_263508.1 CDS xerC NC_007204.1 240236 241273 D tyrosine recombinase XerC 240236..241273 Psychrobacter arcticus 273-4 3514537 YP_263509.1 CDS Psyc_0202 NC_007204.1 241487 242383 R Hydrolase conserved domain; carbon-nitrogen hydrolase complement(241487..242383) Psychrobacter arcticus 273-4 3514538 YP_263510.1 CDS rpoN NC_007204.1 242863 244572 D contain all necessary domains of rpoN except conserved octapeptide with unkown function; Citation: Merrick M.J. In a class of its own--the RNA polymerase sigma factor sigma 54 (sigma N). Mol. Microbiol. 10: 903- 909 (1993) [PubMed: 7934866 ]; RNA polymerase sigma-54 factor family protein 242863..244572 Psychrobacter arcticus 273-4 3514539 YP_263511.1 CDS yfiA NC_007204.1 244975 245355 D encoded adjacently (downstream) from to RpoN (Sigma 54); Citation: Heurlier K et al. J Bacteriol. 2003 Apr;185(7):2227-35. PMID: 12644493 [PubMed - indexed for MEDLINE] 2: Oosthuiz et al. Appl. Environ Microbiol. 2002 Jun;68(6):2770-80. PMID: 12039732 [PubMed - indexed for MEDLINE]; 30S ribosomal protein S30 244975..245355 Psychrobacter arcticus 273-4 3514540 YP_263512.1 CDS thiS NC_007204.1 245787 245987 R thiamine biosynthesis sulfur transfer protein complement(245787..245987) Psychrobacter arcticus 273-4 3514541 YP_263513.1 CDS Psyc_0206 NC_007204.1 246097 246471 R Signal peptide and 4 transmembrane helices predicted. RBS found.; hypothetical protein complement(246097..246471) Psychrobacter arcticus 273-4 3514780 YP_263514.1 CDS rpoH NC_007204.1 246530 247555 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(246530..247555) Psychrobacter arcticus 273-4 3514781 YP_263515.1 CDS Psyc_0208 NC_007204.1 247635 248102 R RBS found.; hypothetical protein complement(247635..248102) Psychrobacter arcticus 273-4 3514782 YP_263516.1 CDS Psyc_0209 NC_007204.1 248494 250179 D hypothetical protein 248494..250179 Psychrobacter arcticus 273-4 3514783 YP_263517.1 CDS Psyc_0210 NC_007204.1 250391 250840 R Possible GatB/Yqey domain (tRNA metabolism). RBS found.; hypothetical protein complement(250391..250840) Psychrobacter arcticus 273-4 3514784 YP_263518.1 CDS rpsU NC_007204.1 251039 251254 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(251039..251254) Psychrobacter arcticus 273-4 3514785 YP_263519.1 CDS Psyc_0212 NC_007204.1 251670 252038 D Signal peptide predicted; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.603 at residue 31; hypothetical protein 251670..252038 Psychrobacter arcticus 273-4 3514786 YP_263520.1 CDS Psyc_0213 NC_007204.1 252105 252626 D Cytochrome c domain at c-terminus; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.417 at residue 34; hypothetical protein 252105..252626 Psychrobacter arcticus 273-4 3514787 YP_263521.1 CDS ygjD NC_007204.1 252902 253951 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 252902..253951 Psychrobacter arcticus 273-4 3514788 YP_263522.1 CDS Psyc_0215 NC_007204.1 254011 254382 D camphor resistance protein CrcB 254011..254382 Psychrobacter arcticus 273-4 3514789 YP_263523.1 CDS metR NC_007204.1 254413 255303 R All possess a potential HTH DNA-binding motif towards their N-termini.; LysR family transcriptional regulator complement(254413..255303) Psychrobacter arcticus 273-4 3514790 YP_263524.1 CDS Psyc_0217 NC_007204.1 255969 256607 D carbonic anhydrase 255969..256607 Psychrobacter arcticus 273-4 3514791 YP_263525.1 CDS gloA NC_007204.1 256690 257259 D lactoylglutathione lyase 256690..257259 Psychrobacter arcticus 273-4 3514792 YP_263526.1 CDS hemF NC_007204.1 257347 258357 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(257347..258357) Psychrobacter arcticus 273-4 3514793 YP_263527.1 CDS ribA NC_007204.1 258376 259068 R GTP cyclohydrolase II complement(258376..259068) Psychrobacter arcticus 273-4 3514794 YP_263528.1 CDS dxs NC_007204.1 259652 261694 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 259652..261694 Psychrobacter arcticus 273-4 3514795 YP_263529.1 CDS suhB NC_007204.1 262183 263010 D inositol monophosphatase 262183..263010 Psychrobacter arcticus 273-4 3514796 YP_263530.1 CDS Psyc_0223 NC_007204.1 263057 264484 R diacylglycerol O-acyltransferase complement(263057..264484) Psychrobacter arcticus 273-4 3514797 YP_263531.1 CDS thiG NC_007204.1 264531 265355 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(264531..265355) Psychrobacter arcticus 273-4 3514798 YP_263532.1 CDS Psyc_0225 NC_007204.1 265553 266287 R hypothetical protein complement(265553..266287) Psychrobacter arcticus 273-4 3514705 YP_263533.1 CDS Psyc_0226 NC_007204.1 266672 268168 D endonuclease 266672..268168 Psychrobacter arcticus 273-4 3514706 YP_263534.1 CDS Psyc_0227 NC_007204.1 268184 269728 D hypothetical protein 268184..269728 Psychrobacter arcticus 273-4 3514707 YP_263535.1 CDS Psyc_0228 NC_007204.1 270938 272026 D hypothetical protein 270938..272026 Psychrobacter arcticus 273-4 3514711 YP_263536.1 CDS pldA NC_007204.1 276220 277656 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.980 at residue 48; outer membrane phospholipase A 276220..277656 Psychrobacter arcticus 273-4 3514714 YP_263537.1 CDS comF NC_007204.1 277687 278529 D competence protein F 277687..278529 Psychrobacter arcticus 273-4 3514715 YP_263538.1 CDS fimT NC_007204.1 278992 279450 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.751) with cleavage site probability 0.319 at residue 26; type IV pilin protein 278992..279450 Psychrobacter arcticus 273-4 3514716 YP_263539.1 CDS pilV NC_007204.1 279450 280100 D type IV fimbrial biogenesis protein PilV 279450..280100 Psychrobacter arcticus 273-4 3514717 YP_263540.1 CDS Psyc_0235 NC_007204.1 280100 281011 D pilus assembly protein PilW 280100..281011 Psychrobacter arcticus 273-4 3515078 YP_263541.1 CDS Psyc_0236 NC_007204.1 281023 281841 D pilus assembly protein PilX 281023..281841 Psychrobacter arcticus 273-4 3515079 YP_263542.1 CDS Psyc_0237 NC_007204.1 281921 285676 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.426 at residue 35; pilus assembly protein tip-associated adhesin PilY1 281921..285676 Psychrobacter arcticus 273-4 3515080 YP_263543.1 CDS Psyc_0238 NC_007204.1 285723 286310 D pilus assembly protein PilE 285723..286310 Psychrobacter arcticus 273-4 3515081 YP_263544.1 CDS pilE NC_007204.1 286310 286747 D pilus assembly protein PilE 286310..286747 Psychrobacter arcticus 273-4 3515082 YP_263545.1 CDS Psyc_0240 NC_007204.1 287088 287507 D pilus assembly protein major pilin PilA 287088..287507 Psychrobacter arcticus 273-4 3515083 YP_263546.1 CDS Psyc_0241 NC_007204.1 287641 288054 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.652) with cleavage site probability 0.517 at residue 33; pilus assembly protein major pilin PilA 287641..288054 Psychrobacter arcticus 273-4 3515084 YP_263547.1 CDS Psyc_0242 NC_007204.1 288187 289947 D hypothetical protein 288187..289947 Psychrobacter arcticus 273-4 3515085 YP_263548.1 CDS Psyc_0243 NC_007204.1 290109 290645 R Possible transposase and inactivated derivatives (COG1943).; hypothetical protein complement(290109..290645) Psychrobacter arcticus 273-4 3515086 YP_263549.1 CDS Psyc_0245 NC_007204.1 290940 291641 R hypothetical protein complement(290940..291641) Psychrobacter arcticus 273-4 3515088 YP_263550.1 CDS Psyc_0246 NC_007204.1 291832 292155 R ferredoxin complement(291832..292155) Psychrobacter arcticus 273-4 3515089 YP_263551.1 CDS mutS NC_007204.1 292249 295425 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(292249..295425) Psychrobacter arcticus 273-4 3515090 YP_263552.1 CDS secA NC_007204.1 295988 298777 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 295988..298777 Psychrobacter arcticus 273-4 3515091 YP_263553.1 CDS Psyc_0249 NC_007204.1 299100 299612 D Signal peptide predicted; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.986) with cleavage site probability 0.971 at residue 28; hypothetical protein 299100..299612 Psychrobacter arcticus 273-4 3515092 YP_263554.1 CDS Psyc_0250 NC_007204.1 299711 300379 R hypothetical protein complement(299711..300379) Psychrobacter arcticus 273-4 3515093 YP_263555.1 CDS Psyc_0251 NC_007204.1 300687 301541 R PRC barrel domain present; hypothetical protein complement(300687..301541) Psychrobacter arcticus 273-4 3515094 YP_263556.1 CDS Psyc_0252 NC_007204.1 302075 303256 R acetyl-CoA acyltransferase complement(302075..303256) Psychrobacter arcticus 273-4 3515095 YP_263557.1 CDS hom NC_007204.1 303315 304661 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(303315..304661) Psychrobacter arcticus 273-4 3514113 YP_263558.1 CDS dsbC NC_007204.1 304875 305732 R Citation: Proc Natl Acad Sci U S A. 1992 Jul 1;89(13):6210-4. http://www.cf.ac.uk/biosi/staff/ehrmann/tools/ecce/Peripla smicBySize.html; thiol:disulfide interchange protein complement(304875..305732) Psychrobacter arcticus 273-4 3514114 YP_263559.1 CDS Psyc_0255 NC_007204.1 306144 307067 D hypothetical protein 306144..307067 Psychrobacter arcticus 273-4 3514115 YP_263560.1 CDS Psyc_0256 NC_007204.1 307312 311529 R RNAse E complement(307312..311529) Psychrobacter arcticus 273-4 3514116 YP_263561.1 CDS rlu NC_007204.1 312743 313759 D ribosomal large subunit pseudouridine synthase C 312743..313759 Psychrobacter arcticus 273-4 3514117 YP_263562.1 CDS Psyc_0258 NC_007204.1 313900 314607 D could also have efflux ability; phosphoglycolate phosphatase 313900..314607 Psychrobacter arcticus 273-4 3514118 YP_263563.1 CDS engB NC_007204.1 314697 315605 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(314697..315605) Psychrobacter arcticus 273-4 3514119 YP_263564.1 CDS scyA NC_007204.1 315892 316227 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.911 at residue 35; cytochrome c, class I 315892..316227 Psychrobacter arcticus 273-4 3514120 YP_263565.1 CDS cc4 NC_007204.1 316570 317238 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.999 at residue 20; cytochrome C, c4 316570..317238 Psychrobacter arcticus 273-4 3514121 YP_263566.1 CDS Psyc_0262 NC_007204.1 317468 318610 D Possible Na+ dependent transporter of the SNF family. Signal peptide and 11 transmembrane helices predicted.; hypothetical protein 317468..318610 Psychrobacter arcticus 273-4 3514122 YP_263567.1 CDS Psyc_0263 NC_007204.1 318598 319002 D hypothetical protein 318598..319002 Psychrobacter arcticus 273-4 3514123 YP_263568.1 CDS omlA NC_007204.1 319028 319444 R outer membrane lipoprotein OmlA complement(319028..319444) Psychrobacter arcticus 273-4 3514124 YP_263569.1 CDS fur NC_007204.1 319768 320202 D ferric-uptake regulator family 319768..320202 Psychrobacter arcticus 273-4 3514125 YP_263570.1 CDS pilU NC_007204.1 320393 321514 R twitching motility protein PilU complement(320393..321514) Psychrobacter arcticus 273-4 3514126 YP_263571.1 CDS pilT NC_007204.1 321690 322742 R pilus retraction protein PilT complement(321690..322742) Psychrobacter arcticus 273-4 3514127 YP_263572.1 CDS Psyc_0268 NC_007204.1 323058 323813 D hypothetical protein 323058..323813 Psychrobacter arcticus 273-4 3514128 YP_263573.1 CDS Psyc_0269 NC_007204.1 324062 325336 R Transporter associated domain and two CBS domains present. RBS found. Signal peptide and 4 transmembrane helices predicted.; hypothetical protein complement(324062..325336) Psychrobacter arcticus 273-4 3514129 YP_263574.1 CDS nadE NC_007204.1 325581 327284 R NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase complement(325581..327284) Psychrobacter arcticus 273-4 3514130 YP_263575.1 CDS Psyc_0271 NC_007204.1 328065 329204 D hypothetical protein 328065..329204 Psychrobacter arcticus 273-4 3514131 YP_263576.1 CDS Psyc_0272 NC_007204.1 329289 330443 D erythronate-4-phosphate dehydrogenase 329289..330443 Psychrobacter arcticus 273-4 3514132 YP_263577.1 CDS lysS/U NC_007204.1 330504 331532 D lysyl-tRNA synthetase, class II 330504..331532 Psychrobacter arcticus 273-4 3514167 YP_263578.1 CDS Psyc_0274 NC_007204.1 331821 332270 R RBS found.; hypothetical protein complement(331821..332270) Psychrobacter arcticus 273-4 3514168 YP_263579.1 CDS purK NC_007204.1 332270 333625 R phosphoribosylaminoimidazole carboxylase complement(332270..333625) Psychrobacter arcticus 273-4 3514169 YP_263580.1 CDS purE NC_007204.1 333860 334420 R phosphoribosylaminoimidazole carboxylase catalytic subunit complement(333860..334420) Psychrobacter arcticus 273-4 3514170 YP_263581.1 CDS Psyc_0277 NC_007204.1 334660 335631 R Possible protein serine-threonine phosphatase domain.; hypothetical protein complement(334660..335631) Psychrobacter arcticus 273-4 3514171 YP_263582.1 CDS Psyc_0278 NC_007204.1 335859 336467 R 6 transmembrane domains; rhomboid family protein complement(335859..336467) Psychrobacter arcticus 273-4 3514172 YP_263583.1 CDS Psyc_0279 NC_007204.1 336924 338426 D hypothetical protein 336924..338426 Psychrobacter arcticus 273-4 3514173 YP_263584.1 CDS Psyc_0280 NC_007204.1 338964 340565 D OmpA family outer membrane protein 338964..340565 Psychrobacter arcticus 273-4 3514174 YP_263585.1 CDS Psyc_0281 NC_007204.1 340828 341910 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(340828..341910) Psychrobacter arcticus 273-4 3514175 YP_263586.1 CDS prc NC_007204.1 342390 344603 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.994) with cleavage site probability 0.884 at residue 33; peptidase 342390..344603 Psychrobacter arcticus 273-4 3514176 YP_263587.1 CDS slyD NC_007204.1 345101 345586 R FKBP-type peptidyl-prolyl cis-trans isomerase complement(345101..345586) Psychrobacter arcticus 273-4 3514177 YP_263588.1 CDS Psyc_0284 NC_007204.1 346048 348033 D protease 346048..348033 Psychrobacter arcticus 273-4 3514178 YP_263589.1 CDS Psyc_0285 NC_007204.1 348127 348966 R hypothetical protein complement(348127..348966) Psychrobacter arcticus 273-4 3514179 YP_263590.1 CDS rsu NC_007204.1 349170 349796 R ribosomal large subunit pseudouridine synthase E complement(349170..349796) Psychrobacter arcticus 273-4 3514180 YP_263591.1 CDS icd2 NC_007204.1 350508 352727 R isocitrate dehydrogenase complement(350508..352727) Psychrobacter arcticus 273-4 3514181 YP_263592.1 CDS Psyc_0288 NC_007204.1 353534 354886 D hypothetical protein 353534..354886 Psychrobacter arcticus 273-4 3514182 YP_263593.1 CDS ubiC NC_007204.1 354939 355445 D chorismate lyase 354939..355445 Psychrobacter arcticus 273-4 3514183 YP_263594.1 CDS glyA NC_007204.1 355846 357102 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 355846..357102 Psychrobacter arcticus 273-4 3514184 YP_263595.1 CDS Psyc_0291 NC_007204.1 357352 357726 R hypothetical protein complement(357352..357726) Psychrobacter arcticus 273-4 3514185 YP_263596.1 CDS Psyc_0292 NC_007204.1 357728 358471 R Citation: Nucleic Acids Res. 1992 Jun 11;20(11):2861-4.; guanine-specific ribonuclease complement(357728..358471) Psychrobacter arcticus 273-4 3515096 YP_263597.1 CDS proA NC_007204.1 358637 359938 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(358637..359938) Psychrobacter arcticus 273-4 3515097 YP_263598.1 CDS Psyc_0294 NC_007204.1 360599 361396 D basic amino acid ABC transporter ATPase subunit 360599..361396 Psychrobacter arcticus 273-4 3515098 YP_263599.1 CDS Psyc_0295 NC_007204.1 361873 362673 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.394 at residue 25; basic amino acid ABC transporter periplasmic binding protein 361873..362673 Psychrobacter arcticus 273-4 3515099 YP_263600.1 CDS Psyc_0296 NC_007204.1 362760 363689 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.968) with cleavage site probability 0.651 at residue 34; basic amino acid ABC transporter periplasmic binding protein 362760..363689 Psychrobacter arcticus 273-4 3515100 YP_263601.1 CDS Psyc_0297 NC_007204.1 364285 365019 D basic amino acid ABC transporter inner membrane protein 364285..365019 Psychrobacter arcticus 273-4 3515101 YP_263602.1 CDS Psyc_0298 NC_007204.1 365033 365758 D basic amino acid ABC transporter inner membrane protein 365033..365758 Psychrobacter arcticus 273-4 3515102 YP_263603.1 CDS Psyc_0299 NC_007204.1 365857 366573 D fumarylacetoacetate (FAA) hydrolase 365857..366573 Psychrobacter arcticus 273-4 3515103 YP_263604.1 CDS Psyc_0300 NC_007204.1 366970 369171 D phosphatase 366970..369171 Psychrobacter arcticus 273-4 3515104 YP_263605.1 CDS Psyc_0301 NC_007204.1 369539 371005 D Esterase/lipase/thioesterase active site present.; hypothetical protein 369539..371005 Psychrobacter arcticus 273-4 3515105 YP_263606.1 CDS Psyc_0302 NC_007204.1 371127 372107 R heat shock protein, Hsp33 complement(371127..372107) Psychrobacter arcticus 273-4 3515106 YP_263607.1 CDS gltI NC_007204.1 372590 373549 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.565 at residue 33; glutamate/aspartate ABC transporter periplasmic binding protein GltI 372590..373549 Psychrobacter arcticus 273-4 3515107 YP_263608.1 CDS gltJ NC_007204.1 373659 374405 D glutamate/aspartate ABC transporter inner membrane protein GltJ 373659..374405 Psychrobacter arcticus 273-4 3515108 YP_263609.1 CDS gltK NC_007204.1 374402 375073 D glutamate/aspartate ABC transporter inner membrane protein GltK 374402..375073 Psychrobacter arcticus 273-4 3515109 YP_263610.1 CDS gltL NC_007204.1 375161 375979 D glutamate/aspartate ABC transporter inner membrane protein GltL 375161..375979 Psychrobacter arcticus 273-4 3515110 YP_263611.1 CDS Psyc_0307 NC_007204.1 376375 377634 D pyridine nucleotide-disulfide oxidoreductase 376375..377634 Psychrobacter arcticus 273-4 3515111 YP_263612.1 CDS Psyc_0308 NC_007204.1 377883 379637 D activates fatty acids by binding to coenzyme A; AMP-binding protein 377883..379637 Psychrobacter arcticus 273-4 3515112 YP_263613.1 CDS Psyc_0309 NC_007204.1 379861 381471 D acyl-CoA carboxylase subunit beta 379861..381471 Psychrobacter arcticus 273-4 3515113 YP_263614.1 CDS Psyc_0310 NC_007204.1 381521 382327 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 381521..382327 Psychrobacter arcticus 273-4 3515114 YP_263615.1 CDS Psyc_0311 NC_007204.1 382457 384577 D 3-methylcrotonoyl-CoA carboxylase subunit alpha 382457..384577 Psychrobacter arcticus 273-4 3515115 YP_263616.1 CDS mvaB NC_007204.1 384592 385512 D hydroxymethylglutaryl-CoA lyase 384592..385512 Psychrobacter arcticus 273-4 3514542 YP_263617.1 CDS acd NC_007204.1 385592 386779 D isovaleryl-CoA dehydrogenase 385592..386779 Psychrobacter arcticus 273-4 3514543 YP_263618.1 CDS Psyc_0314 NC_007204.1 386881 387609 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(386881..387609) Psychrobacter arcticus 273-4 3514544 YP_263619.1 CDS birA NC_007204.1 387647 388621 R biotin-(acetyl CoA carboxylase) holoenzyme synthetase complement(387647..388621) Psychrobacter arcticus 273-4 3514545 YP_263620.1 CDS Psyc_0317 NC_007204.1 389517 390452 D hypothetical protein 389517..390452 Psychrobacter arcticus 273-4 3514547 YP_263621.1 CDS smc NC_007204.1 390525 394448 D Citation: Hirano T. 1998. SMC protein complexes and higher-order chromosome dynamics. Curr Opin Cell Biol. 10:317-322.; condensin subunit Smc 390525..394448 Psychrobacter arcticus 273-4 3514548 YP_263622.1 CDS zipA NC_007204.1 394653 395678 D cell division protein 394653..395678 Psychrobacter arcticus 273-4 3514549 YP_263623.1 CDS lig NC_007204.1 396012 398087 D This protein also contains a BRCT domain (predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage).; Citation: Lee JY, Chang C, Song HK, Moon J, Yang JK, Kim HK, Kwon ST, Suh SW. 2000. Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications. EMBO J. 19:1119-1129.; NAD dependent DNA ligase 396012..398087 Psychrobacter arcticus 273-4 3514550 YP_263624.1 CDS Psyc_0321 NC_007204.1 398321 399016 R hypothetical protein complement(398321..399016) Psychrobacter arcticus 273-4 3514551 YP_263625.1 CDS Psyc_0322 NC_007204.1 399055 399876 R hypothetical protein complement(399055..399876) Psychrobacter arcticus 273-4 3514552 YP_263626.1 CDS Psyc_0323 NC_007204.1 400165 400695 R hypothetical protein complement(400165..400695) Psychrobacter arcticus 273-4 3514553 YP_263627.1 CDS Psyc_0324 NC_007204.1 401246 403693 R hypothetical protein complement(401246..403693) Psychrobacter arcticus 273-4 3514554 YP_263628.1 CDS smpB NC_007204.1 404366 404842 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(404366..404842) Psychrobacter arcticus 273-4 3514555 YP_263629.1 CDS coaD NC_007204.1 405107 405619 D phosphopantetheine adenylyltransferase 405107..405619 Psychrobacter arcticus 273-4 3514556 YP_263630.1 CDS Psyc_0327 NC_007204.1 405692 405940 D 4Fe-4S ferredoxin 405692..405940 Psychrobacter arcticus 273-4 3514557 YP_263631.1 CDS bioA NC_007204.1 405944 407254 D aminotransferase 405944..407254 Psychrobacter arcticus 273-4 3514558 YP_263632.1 CDS bioD NC_007204.1 407266 407985 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 407266..407985 Psychrobacter arcticus 273-4 3514559 YP_263633.1 CDS lepA NC_007204.1 409080 410876 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 409080..410876 Psychrobacter arcticus 273-4 3515047 YP_263634.1 CDS lepB NC_007204.1 410955 411857 D signal peptidase I 410955..411857 Psychrobacter arcticus 273-4 3515048 YP_263635.1 CDS Psyc_0332 NC_007204.1 412018 412413 D One transmembrane helix predicted.; hypothetical protein 412018..412413 Psychrobacter arcticus 273-4 3515049 YP_263636.1 CDS rnc NC_007204.1 412567 413364 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 412567..413364 Psychrobacter arcticus 273-4 3515050 YP_263637.1 CDS era NC_007204.1 413679 414671 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 413679..414671 Psychrobacter arcticus 273-4 3515051 YP_263638.1 CDS recO NC_007204.1 414720 415484 D DNA replication and repair protein RecO 414720..415484 Psychrobacter arcticus 273-4 3515052 YP_263639.1 CDS pdxJ NC_007204.1 415584 416378 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 415584..416378 Psychrobacter arcticus 273-4 3515053 YP_263640.1 CDS Psyc_0337 NC_007204.1 416416 417003 R hypothetical protein complement(416416..417003) Psychrobacter arcticus 273-4 3515054 YP_263641.1 CDS oprF NC_007204.1 417594 418778 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.980 at residue 23; hypothetical protein 417594..418778 Psychrobacter arcticus 273-4 3515055 YP_263642.1 CDS Psyc_0339 NC_007204.1 419133 420980 D regulatory protein TypA or elongation factor Tu 419133..420980 Psychrobacter arcticus 273-4 3515056 YP_263643.1 CDS mscL NC_007204.1 421373 421810 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 421373..421810 Psychrobacter arcticus 273-4 3515057 YP_263644.1 CDS Psyc_0341 NC_007204.1 421913 422365 R hypothetical protein complement(421913..422365) Psychrobacter arcticus 273-4 3515058 YP_263645.1 CDS fpg NC_007204.1 422692 423621 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(422692..423621) Psychrobacter arcticus 273-4 3515059 YP_263646.1 CDS relA NC_007204.1 423686 426226 R The two proteins are strongly similar. In many species, a single homolog to SpoT and RelA appears reponsible for both ppGpp synthesis and ppGpp degradation; RelA/SpoT family protein complement(423686..426226) Psychrobacter arcticus 273-4 3515060 YP_263647.1 CDS rumA NC_007204.1 426591 428129 R in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase complement(426591..428129) Psychrobacter arcticus 273-4 3515061 YP_263648.1 CDS Psyc_0345 NC_007204.1 428425 429240 R hypothetical protein complement(428425..429240) Psychrobacter arcticus 273-4 3515062 YP_263649.1 CDS cysM NC_007204.1 429328 430284 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(429328..430284) Psychrobacter arcticus 273-4 3514037 YP_263650.1 CDS Psyc_0347 NC_007204.1 430705 434112 D signal transduction histidine kinase sensor 430705..434112 Psychrobacter arcticus 273-4 3514038 YP_263651.1 CDS Psyc_0348 NC_007204.1 434240 435052 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 434240..435052 Psychrobacter arcticus 273-4 3514039 YP_263652.1 CDS Psyc_0349 NC_007204.1 435269 436528 D major facilitator superfamily multi-drug efflux pump 435269..436528 Psychrobacter arcticus 273-4 3514040 YP_263653.1 CDS rpsB NC_007204.1 436838 437632 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 436838..437632 Psychrobacter arcticus 273-4 3514041 YP_263654.1 CDS tsf NC_007204.1 437862 438746 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 437862..438746 Psychrobacter arcticus 273-4 3514042 YP_263655.1 CDS Psyc_0352 NC_007204.1 438893 439714 R lytic transglycosylase complement(438893..439714) Psychrobacter arcticus 273-4 3514043 YP_263656.1 CDS Psyc_0353 NC_007204.1 440145 440834 R hypothetical protein complement(440145..440834) Psychrobacter arcticus 273-4 3514044 YP_263657.1 CDS Psyc_0354 NC_007204.1 440866 441294 R hypothetical protein complement(440866..441294) Psychrobacter arcticus 273-4 3514045 YP_263658.1 CDS hflX NC_007204.1 441586 443055 R GTP - binding protein, phage lambda cII repressor complement(441586..443055) Psychrobacter arcticus 273-4 3514046 YP_263659.1 CDS plsC NC_007204.1 443633 444433 D lyso-ornithine lipid acyltransferase 443633..444433 Psychrobacter arcticus 273-4 3514047 YP_263660.1 CDS Psyc_0357 NC_007204.1 444568 445608 R oxidoreductase, aldo/keto reductase complement(444568..445608) Psychrobacter arcticus 273-4 3514048 YP_263661.1 CDS Psyc_0358 NC_007204.1 445651 446148 R FKBP-type peptidyl-prolyl cis-trans isomerase complement(445651..446148) Psychrobacter arcticus 273-4 3514049 YP_263662.1 CDS Psyc_0359 NC_007204.1 446465 447346 D There are 9 addittional ORFs identical to this one.; IS4 family transposase 446465..447346 Psychrobacter arcticus 273-4 3514050 YP_263663.1 CDS Psyc_0360 NC_007204.1 448233 449150 D Contains TPR repeats, SEL1 subfamily.; hypothetical protein 448233..449150 Psychrobacter arcticus 273-4 3514051 YP_263664.1 CDS Psyc_0361 NC_007204.1 449214 449426 R hypothetical protein complement(449214..449426) Psychrobacter arcticus 273-4 3514052 YP_263665.1 CDS Psyc_0362 NC_007204.1 449893 450381 D hypothetical protein 449893..450381 Psychrobacter arcticus 273-4 3514053 YP_263666.1 CDS lspA NC_007204.1 450659 451174 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(450659..451174) Psychrobacter arcticus 273-4 3514054 YP_263667.1 CDS ileS NC_007204.1 451302 454127 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(451302..454127) Psychrobacter arcticus 273-4 3514055 YP_263668.1 CDS Psyc_0365 NC_007204.1 454611 455174 R thioredoxin protein complement(454611..455174) Psychrobacter arcticus 273-4 3514434 YP_263669.1 CDS Psyc_0366 NC_007204.1 455427 457064 R amidohydrolase complement(455427..457064) Psychrobacter arcticus 273-4 3514435 YP_263670.1 CDS Psyc_0367 NC_007204.1 457612 458244 D hypothetical protein 457612..458244 Psychrobacter arcticus 273-4 3514436 YP_263671.1 CDS Psyc_0368 NC_007204.1 458394 459836 R oxidoreductase, FAD binding complement(458394..459836) Psychrobacter arcticus 273-4 3514437 YP_263672.1 CDS serA NC_007204.1 460224 461450 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 460224..461450 Psychrobacter arcticus 273-4 3514438 YP_263673.1 CDS Psyc_0370 NC_007204.1 461573 462631 R hypothetical protein complement(461573..462631) Psychrobacter arcticus 273-4 3514439 YP_263674.1 CDS Psyc_0371 NC_007204.1 462797 463804 R hypothetical protein complement(462797..463804) Psychrobacter arcticus 273-4 3514440 YP_263675.1 CDS Psyc_0372 NC_007204.1 463898 464140 R hypothetical protein complement(463898..464140) Psychrobacter arcticus 273-4 3514441 YP_263676.1 CDS Psyc_0373 NC_007204.1 464315 464896 R hypothetical protein complement(464315..464896) Psychrobacter arcticus 273-4 3514442 YP_263677.1 CDS Psyc_0374 NC_007204.1 465299 465916 R hypothetical protein complement(465299..465916) Psychrobacter arcticus 273-4 3514443 YP_263678.1 CDS metX NC_007204.1 465913 467250 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(465913..467250) Psychrobacter arcticus 273-4 3514444 YP_263679.1 CDS hemH NC_007204.1 467731 468750 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 467731..468750 Psychrobacter arcticus 273-4 3514445 YP_263680.1 CDS Psyc_0377 NC_007204.1 468847 469221 R hypothetical protein complement(468847..469221) Psychrobacter arcticus 273-4 3514446 YP_263681.1 CDS polA NC_007204.1 469527 472397 R DNA polymerase I complement(469527..472397) Psychrobacter arcticus 273-4 3514447 YP_263682.1 CDS ohrA NC_007204.1 472843 473256 R organic hydroperoxide resistance protein complement(472843..473256) Psychrobacter arcticus 273-4 3514448 YP_263683.1 CDS prfC NC_007204.1 474234 475829 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 474234..475829 Psychrobacter arcticus 273-4 3514449 YP_263684.1 CDS Psyc_0382 NC_007204.1 476897 477853 D Forkhead-associated (FHA) domain. The domain is present in a diverse range of proteins, such as kinases, phosphatases, kinesins, transcription factors, RNA-binding proteins and metabolic enzymes which partake in many different cellular processes; hypothetical protein 476897..477853 Psychrobacter arcticus 273-4 3514451 YP_263685.1 CDS tufBa NC_007204.1 479294 480484 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 479294..480484 Psychrobacter arcticus 273-4 3513987 YP_263686.1 CDS Psyc_0384 NC_007204.1 480663 481214 R hypothetical protein complement(480663..481214) Psychrobacter arcticus 273-4 3513988 YP_263687.1 CDS rimI NC_007204.1 481437 481907 D ribosomal-protein-alanine acetyltransferase 481437..481907 Psychrobacter arcticus 273-4 3513989 YP_263688.1 CDS Psyc_0386 NC_007204.1 481988 482422 R MerR family transcriptional regulator complement(481988..482422) Psychrobacter arcticus 273-4 3513990 YP_263689.1 CDS aat NC_007204.1 482733 483539 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(482733..483539) Psychrobacter arcticus 273-4 3513991 YP_263690.1 CDS trxB NC_007204.1 483610 484632 R thioredoxin reductase complement(483610..484632) Psychrobacter arcticus 273-4 3513992 YP_263691.1 CDS ftsK NC_007204.1 485598 488804 D DNA translocase FtsK 485598..488804 Psychrobacter arcticus 273-4 3513993 YP_263692.1 CDS Psyc_0390 NC_007204.1 489143 489631 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(489143..489631) Psychrobacter arcticus 273-4 3513994 YP_263693.1 CDS dnaQ NC_007204.1 489872 490483 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(489872..490483) Psychrobacter arcticus 273-4 3513995 YP_263694.1 CDS Psyc_0392 NC_007204.1 490541 492499 R nucleotidyltransferase complement(490541..492499) Psychrobacter arcticus 273-4 3513996 YP_263695.1 CDS Psyc_0393 NC_007204.1 492825 494051 R catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase complement(492825..494051) Psychrobacter arcticus 273-4 3513997 YP_263696.1 CDS Psyc_0394 NC_007204.1 494365 495033 D Two transmembrane helices predicted.; hypothetical protein 494365..495033 Psychrobacter arcticus 273-4 3513998 YP_263697.1 CDS glnD NC_007204.1 495044 497791 R Senses intracellular glutamine levels via ACT domain; protein-P-II uridylyltransferase complement(495044..497791) Psychrobacter arcticus 273-4 3514133 YP_263698.1 CDS map NC_007204.1 497967 498761 R methionine aminopeptidase complement(497967..498761) Psychrobacter arcticus 273-4 3514134 YP_263699.1 CDS Psyc_0397 NC_007204.1 499186 499533 D Signal peptide predicted.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.716) with cleavage site probability 0.275 at residue 40; hypothetical protein 499186..499533 Psychrobacter arcticus 273-4 3514135 YP_263700.1 CDS Psyc_0399 NC_007204.1 500233 500403 D hypothetical protein 500233..500403 Psychrobacter arcticus 273-4 3514137 YP_263701.1 CDS Psyc_0400 NC_007204.1 500449 500598 D hypothetical protein 500449..500598 Psychrobacter arcticus 273-4 3514138 YP_263702.1 CDS dcm NC_007204.1 500671 502233 R Citation: Lauster R, Trautner TA, Noyer-Weidner M. 1989. Cytosine-specific type II DNA methyltransferases. A conserved enzyme core with variable target-recognizing domains. J Mol Biol. 206(2):305-12.; C-5 cytosine-specific DNA methylase complement(500671..502233) Psychrobacter arcticus 273-4 3514139 YP_263703.1 CDS Psyc_0402 NC_007204.1 502506 503840 D hypothetical protein 502506..503840 Psychrobacter arcticus 273-4 3514140 YP_263704.1 CDS metH NC_007204.1 503979 507794 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(503979..507794) Psychrobacter arcticus 273-4 3514141 YP_263705.1 CDS Psyc_0404 NC_007204.1 508533 509117 D fasciclin domain; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.995) with cleavage site probability 0.457 at residue 22; hypothetical protein 508533..509117 Psychrobacter arcticus 273-4 3514142 YP_263706.1 CDS Psyc_0405 NC_007204.1 509429 510031 D fasciclin domain; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.656 at residue 21; hypothetical protein 509429..510031 Psychrobacter arcticus 273-4 3514143 YP_263707.1 CDS Psyc_0407 NC_007204.1 511927 512808 D There are 9 addittional ORFs identical to this one.; IS4 family transposase 511927..512808 Psychrobacter arcticus 273-4 3514145 YP_263708.1 CDS Psyc_0409 NC_007204.1 513935 514567 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.858 at residue 34; LemA family protein 513935..514567 Psychrobacter arcticus 273-4 3514147 YP_263709.1 CDS Psyc_0410 NC_007204.1 514839 515999 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 1.000 at residue 26; hypothetical protein 514839..515999 Psychrobacter arcticus 273-4 3514148 YP_263710.1 CDS Psyc_0411 NC_007204.1 516094 516618 D hypothetical protein 516094..516618 Psychrobacter arcticus 273-4 3515063 YP_263711.1 CDS Psyc_0412 NC_007204.1 516806 517165 D hypothetical protein 516806..517165 Psychrobacter arcticus 273-4 3515064 YP_263712.1 CDS Psyc_0414 NC_007204.1 517955 518836 D There are 9 addittional ORFs identical to this one.; IS4 family transposase 517955..518836 Psychrobacter arcticus 273-4 3515066 YP_263713.1 CDS Psyc_0416 NC_007204.1 520957 522330 D type I restriction-modification system subunit S 520957..522330 Psychrobacter arcticus 273-4 3515068 YP_263714.1 CDS Psyc_0417 NC_007204.1 522539 522829 R hypothetical protein complement(522539..522829) Psychrobacter arcticus 273-4 3515069 YP_263715.1 CDS gst NC_007204.1 523115 523795 D glutathione S-transferase 523115..523795 Psychrobacter arcticus 273-4 3515070 YP_263716.1 CDS Psyc_0419 NC_007204.1 524327 525019 D hypothetical protein 524327..525019 Psychrobacter arcticus 273-4 3515071 YP_263717.1 CDS Psyc_0420 NC_007204.1 524974 526065 D hypothetical protein 524974..526065 Psychrobacter arcticus 273-4 3515072 YP_263718.1 CDS Psyc_0421 NC_007204.1 526062 527150 R Part of the pathway of flavonoids, stilbene and lignin biosynthesis.; chalcone synthase complement(526062..527150) Psychrobacter arcticus 273-4 3515073 YP_263719.1 CDS Psyc_0422 NC_007204.1 527278 527538 R hypothetical protein complement(527278..527538) Psychrobacter arcticus 273-4 3515074 YP_263720.1 CDS Psyc_0423 NC_007204.1 527666 528094 R transposase ISSod6 complement(527666..528094) Psychrobacter arcticus 273-4 3515075 YP_263721.1 CDS Psyc_0424 NC_007204.1 528255 531563 D type I restriction enzyme, R subunit 528255..531563 Psychrobacter arcticus 273-4 3515076 YP_263722.1 CDS Psyc_0425 NC_007204.1 531987 532658 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.748 at residue 24; cytochrome C, class I 531987..532658 Psychrobacter arcticus 273-4 3514223 YP_263723.1 CDS Psyc_0426 NC_007204.1 532980 533927 D ABC transporter ATPase 532980..533927 Psychrobacter arcticus 273-4 3514224 YP_263724.1 CDS Psyc_0427 NC_007204.1 534080 534853 D ABC transporter inner membrane subunit 534080..534853 Psychrobacter arcticus 273-4 3514225 YP_263725.1 CDS queF NC_007204.1 535094 535951 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 535094..535951 Psychrobacter arcticus 273-4 3514226 YP_263726.1 CDS proS NC_007204.1 536241 537959 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(536241..537959) Psychrobacter arcticus 273-4 3514227 YP_263727.1 CDS phrB NC_007204.1 538822 540447 R Citation: Sancar A, Smith FW, Sancar GB. 1984. Purification of Escherichia coli DNA photolyase. J Biol Chem. 259(9):6028-32.; deoxyribodipyrimidine photo-lyase type I complement(538822..540447) Psychrobacter arcticus 273-4 3514228 YP_263728.1 CDS Psyc_0431 NC_007204.1 540585 541268 D phosphoribosylanthranilate isomerase 540585..541268 Psychrobacter arcticus 273-4 3514229 YP_263729.1 CDS trpB NC_007204.1 541376 542650 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 541376..542650 Psychrobacter arcticus 273-4 3514230 YP_263730.1 CDS trpA NC_007204.1 542793 543629 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 542793..543629 Psychrobacter arcticus 273-4 3514231 YP_263731.1 CDS accD NC_007204.1 543896 544849 D acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 543896..544849 Psychrobacter arcticus 273-4 3514232 YP_263732.1 CDS folC NC_007204.1 545092 546459 D bifunctional folylpolyglutamate synthase/dihydrofolate synthase FolC 545092..546459 Psychrobacter arcticus 273-4 3514233 YP_263733.1 CDS lysM NC_007204.1 546690 547805 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.989) with cleavage site probability 0.750 at residue 24; peptidoglycan-binding LysM 546690..547805 Psychrobacter arcticus 273-4 3514234 YP_263734.1 CDS Psyc_0437 NC_007204.1 548132 548662 D hypothetical protein 548132..548662 Psychrobacter arcticus 273-4 3514235 YP_263735.1 CDS Psyc_0438 NC_007204.1 548678 549640 R Part of a prophage; hypothetical protein complement(548678..549640) Psychrobacter arcticus 273-4 3514236 YP_263736.1 CDS Psyc_0439 NC_007204.1 550211 550699 R hypothetical protein complement(550211..550699) Psychrobacter arcticus 273-4 3514237 YP_263737.1 CDS Psyc_0440 NC_007204.1 550716 551261 R N-acetylmuramoyl-L-alanine amidase complement(550716..551261) Psychrobacter arcticus 273-4 3514238 YP_263738.1 CDS Psyc_0441 NC_007204.1 551327 551650 R hypothetical protein complement(551327..551650) Psychrobacter arcticus 273-4 3514239 YP_263739.1 CDS Psyc_0442 NC_007204.1 551715 552266 R hypothetical protein complement(551715..552266) Psychrobacter arcticus 273-4 3514240 YP_263740.1 CDS Psyc_0443 NC_007204.1 552271 555444 R prophage LambdaSo, host specificity protein J complement(552271..555444) Psychrobacter arcticus 273-4 3514241 YP_263741.1 CDS Psyc_0444 NC_007204.1 555447 556010 R phage protein tail protein complement(555447..556010) Psychrobacter arcticus 273-4 3514589 YP_263742.1 CDS Psyc_0445 NC_007204.1 556066 556815 R prophage LambdaSo, tail assembly protein K complement(556066..556815) Psychrobacter arcticus 273-4 3514590 YP_263743.1 CDS Psyc_0446 NC_007204.1 556815 557633 R phage minor tail protein complement(556815..557633) Psychrobacter arcticus 273-4 3514591 YP_263744.1 CDS Psyc_0447 NC_007204.1 557921 559009 R Within prophage.; RNA-directed DNA polymerase complement(557921..559009) Psychrobacter arcticus 273-4 3514592 YP_263745.1 CDS Psyc_0448 NC_007204.1 559269 559652 R hypothetical protein complement(559269..559652) Psychrobacter arcticus 273-4 3514593 YP_263746.1 CDS Psyc_0449 NC_007204.1 559678 561144 R hypothetical protein complement(559678..561144) Psychrobacter arcticus 273-4 3514594 YP_263747.1 CDS Psyc_0450 NC_007204.1 561153 561491 R LambdaSo, minor tail protein M complement(561153..561491) Psychrobacter arcticus 273-4 3514595 YP_263748.1 CDS Psyc_0451 NC_007204.1 561553 561825 R similar to Shewanella oneidensis hypothetical protein SO2991; hypothetical protein complement(561553..561825) Psychrobacter arcticus 273-4 3514596 YP_263749.1 CDS Psyc_0452 NC_007204.1 562011 565082 R pore-forming tail tip protein complement(562011..565082) Psychrobacter arcticus 273-4 3514597 YP_263750.1 CDS Psyc_0453 NC_007204.1 565254 565784 R hypothetical protein complement(565254..565784) Psychrobacter arcticus 273-4 3514598 YP_263751.1 CDS Psyc_0454 NC_007204.1 565850 566074 R hypothetical protein complement(565850..566074) Psychrobacter arcticus 273-4 3514599 YP_263752.1 CDS Psyc_0455 NC_007204.1 566176 566541 R hypothetical protein complement(566176..566541) Psychrobacter arcticus 273-4 3514600 YP_263753.1 CDS Psyc_0456 NC_007204.1 566615 567037 R hypothetical protein complement(566615..567037) Psychrobacter arcticus 273-4 3514601 YP_263754.1 CDS Psyc_0457 NC_007204.1 567059 567418 R hypothetical protein complement(567059..567418) Psychrobacter arcticus 273-4 3514602 YP_263755.1 CDS Psyc_0458 NC_007204.1 567436 567903 R Part of a prophage; hypothetical protein complement(567436..567903) Psychrobacter arcticus 273-4 3514603 YP_263756.1 CDS Psyc_0459 NC_007204.1 567896 568228 R phage head-tail adaptor protein complement(567896..568228) Psychrobacter arcticus 273-4 3514604 YP_263757.1 CDS Psyc_0460 NC_007204.1 568230 568538 R hypothetical protein complement(568230..568538) Psychrobacter arcticus 273-4 3514605 YP_263758.1 CDS Psyc_0461 NC_007204.1 568652 569905 R major phage capsid subunit complement(568652..569905) Psychrobacter arcticus 273-4 3514606 YP_263759.1 CDS Psyc_0462 NC_007204.1 569983 570729 R prohead peptidase complement(569983..570729) Psychrobacter arcticus 273-4 3514607 YP_263760.1 CDS Psyc_0463 NC_007204.1 570722 571957 R phage portal protein complement(570722..571957) Psychrobacter arcticus 273-4 3514608 YP_263761.1 CDS Psyc_0464 NC_007204.1 571959 573704 R Often located next to the small subunit.; phage terminase, large subunit complement(571959..573704) Psychrobacter arcticus 273-4 3514416 YP_263762.1 CDS Psyc_0465 NC_007204.1 573711 574184 R Members tend to be adjacent to the phage terminase large subunit gene.; phage terminase small subunit complement(573711..574184) Psychrobacter arcticus 273-4 3514417 YP_263763.1 CDS Psyc_0466 NC_007204.1 574289 574735 R phage holin protein complement(574289..574735) Psychrobacter arcticus 273-4 3514418 YP_263764.1 CDS Psyc_0467 NC_007204.1 574862 575263 R hypothetical protein complement(574862..575263) Psychrobacter arcticus 273-4 3514419 YP_263765.1 CDS Psyc_0468 NC_007204.1 575616 577316 R hypothetical protein complement(575616..577316) Psychrobacter arcticus 273-4 3514420 YP_263766.1 CDS Psyc_0469 NC_007204.1 577513 578529 R Within prophage.; bacteriophage DNA primase complement(577513..578529) Psychrobacter arcticus 273-4 3514421 YP_263767.1 CDS Psyc_0470 NC_007204.1 578519 579022 R hypothetical protein complement(578519..579022) Psychrobacter arcticus 273-4 3514422 YP_263768.1 CDS Psyc_0471 NC_007204.1 579064 579318 R Part of a prophage; hypothetical protein complement(579064..579318) Psychrobacter arcticus 273-4 3514423 YP_263769.1 CDS Psyc_0472 NC_007204.1 579446 580120 D in prophage; helix turn helix motif; Cro/CI family transcriptional regulator 579446..580120 Psychrobacter arcticus 273-4 3514424 YP_263770.1 CDS Psyc_0473 NC_007204.1 580383 580658 D Within prophage.; hypothetical protein 580383..580658 Psychrobacter arcticus 273-4 3514425 YP_263771.1 CDS Psyc_0474 NC_007204.1 580655 581611 D Within prophage.; hypothetical protein 580655..581611 Psychrobacter arcticus 273-4 3514426 YP_263772.1 CDS Psyc_0475 NC_007204.1 581604 581957 D Within prophage; hypothetical protein 581604..581957 Psychrobacter arcticus 273-4 3514427 YP_263773.1 CDS Psyc_0476 NC_007204.1 581957 582475 D Within prophage, signal peptide predicted.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.726) with cleavage site probability 0.717 at residue 27; hypothetical protein 581957..582475 Psychrobacter arcticus 273-4 3514428 YP_263774.1 CDS Psyc_0477 NC_007204.1 582890 583405 D Within prophage, contains ATP/GTP-binding site motif A.; hypothetical protein 582890..583405 Psychrobacter arcticus 273-4 3514429 YP_263775.1 CDS Psyc_0478 NC_007204.1 583405 583605 D phage TraR/DksA family protein 583405..583605 Psychrobacter arcticus 273-4 3514430 YP_263776.1 CDS Psyc_0479 NC_007204.1 584020 585093 D Within prophage.; phage integrase 584020..585093 Psychrobacter arcticus 273-4 3514431 YP_263777.1 CDS gatB NC_007204.1 585580 587109 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(585580..587109) Psychrobacter arcticus 273-4 3514433 YP_263778.1 CDS gatA NC_007204.1 587109 588605 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(587109..588605) Psychrobacter arcticus 273-4 3514280 YP_263779.1 CDS gatC NC_007204.1 588671 588985 R aspartyl/glutamyl-tRNA amidotransferase subunit C complement(588671..588985) Psychrobacter arcticus 273-4 3514281 YP_263780.1 CDS mreB NC_007204.1 589699 590727 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 589699..590727 Psychrobacter arcticus 273-4 3514282 YP_263781.1 CDS mreC NC_007204.1 590985 591845 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 590985..591845 Psychrobacter arcticus 273-4 3514283 YP_263782.1 CDS mreD NC_007204.1 591993 592478 D rod shape-determining protein MreD 591993..592478 Psychrobacter arcticus 273-4 3514284 YP_263783.1 CDS maf NC_007204.1 592618 593313 D maf protein implicated in inhibition of septum formation 592618..593313 Psychrobacter arcticus 273-4 3514285 YP_263784.1 CDS Psyc_0487 NC_007204.1 593525 595111 D RNAse G 593525..595111 Psychrobacter arcticus 273-4 3514286 YP_263785.1 CDS rpsJ NC_007204.1 595612 595923 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 595612..595923 Psychrobacter arcticus 273-4 3514287 YP_263786.1 CDS rplC NC_007204.1 595972 596610 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 595972..596610 Psychrobacter arcticus 273-4 3514288 YP_263787.1 CDS rplD NC_007204.1 596625 597227 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 596625..597227 Psychrobacter arcticus 273-4 3514289 YP_263788.1 CDS rplW NC_007204.1 597224 597574 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 597224..597574 Psychrobacter arcticus 273-4 3514290 YP_263789.1 CDS rplB NC_007204.1 597586 598413 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 597586..598413 Psychrobacter arcticus 273-4 3514291 YP_263790.1 CDS rpsS NC_007204.1 598426 598701 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 598426..598701 Psychrobacter arcticus 273-4 3514292 YP_263791.1 CDS rplV NC_007204.1 598712 599041 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 598712..599041 Psychrobacter arcticus 273-4 3514293 YP_263792.1 CDS rpsC NC_007204.1 599045 599773 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 599045..599773 Psychrobacter arcticus 273-4 3514294 YP_263793.1 CDS rplP NC_007204.1 599777 600190 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 599777..600190 Psychrobacter arcticus 273-4 3514295 YP_263794.1 CDS rpmC NC_007204.1 600190 600387 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 600190..600387 Psychrobacter arcticus 273-4 3514296 YP_263795.1 CDS rpsQ NC_007204.1 600384 600659 D 30S ribosomal protein S17 600384..600659 Psychrobacter arcticus 273-4 3514297 YP_263796.1 CDS rplN NC_007204.1 600841 601209 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 600841..601209 Psychrobacter arcticus 273-4 3514298 YP_263797.1 CDS rplX NC_007204.1 601218 601535 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 601218..601535 Psychrobacter arcticus 273-4 3514299 YP_263798.1 CDS rplE NC_007204.1 601557 602093 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 601557..602093 Psychrobacter arcticus 273-4 3514300 YP_263799.1 CDS rpsN NC_007204.1 602106 602411 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 602106..602411 Psychrobacter arcticus 273-4 3514301 YP_263800.1 CDS rpsH NC_007204.1 602423 602821 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 602423..602821 Psychrobacter arcticus 273-4 3514302 YP_263801.1 CDS rplF NC_007204.1 602997 603530 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 602997..603530 Psychrobacter arcticus 273-4 3514303 YP_263802.1 CDS rplR NC_007204.1 603542 603892 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 603542..603892 Psychrobacter arcticus 273-4 3514304 YP_263803.1 CDS rpsE NC_007204.1 603895 604410 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 603895..604410 Psychrobacter arcticus 273-4 3514305 YP_263804.1 CDS rpmD NC_007204.1 604431 604610 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 604431..604610 Psychrobacter arcticus 273-4 3514306 YP_263805.1 CDS rplO NC_007204.1 604610 605050 D late assembly protein; 50S ribosomal protein L15 604610..605050 Psychrobacter arcticus 273-4 3514307 YP_263806.1 CDS secY NC_007204.1 605070 606401 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 605070..606401 Psychrobacter arcticus 273-4 3514308 YP_263807.1 CDS rpmJ NC_007204.1 606433 606549 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 606433..606549 Psychrobacter arcticus 273-4 3514309 YP_263808.1 CDS rpsM NC_007204.1 606807 607163 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 606807..607163 Psychrobacter arcticus 273-4 3514310 YP_263809.1 CDS rpsK NC_007204.1 607184 607573 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 607184..607573 Psychrobacter arcticus 273-4 3514311 YP_263810.1 CDS rpsD NC_007204.1 607622 608263 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 607622..608263 Psychrobacter arcticus 273-4 3514312 YP_263811.1 CDS rpoA NC_007204.1 608345 609352 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 608345..609352 Psychrobacter arcticus 273-4 3514313 YP_263812.1 CDS rplQ NC_007204.1 609372 609731 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 609372..609731 Psychrobacter arcticus 273-4 3514314 YP_263813.1 CDS Psyc_0516 NC_007204.1 609944 610567 R Possible RNA binding protein; translation factor SUA5 complement(609944..610567) Psychrobacter arcticus 273-4 3514315 YP_263814.1 CDS Psyc_0517 NC_007204.1 610764 611561 R hypothetical protein complement(610764..611561) Psychrobacter arcticus 273-4 3514316 YP_263815.1 CDS Psyc_0518 NC_007204.1 611740 612333 D hypothetical protein 611740..612333 Psychrobacter arcticus 273-4 3514317 YP_263816.1 CDS rpmF NC_007204.1 612666 612848 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 612666..612848 Psychrobacter arcticus 273-4 3514318 YP_263817.1 CDS fabD NC_007204.1 613341 614309 D ACP S-malonyltransferase 613341..614309 Psychrobacter arcticus 273-4 3513999 YP_263818.1 CDS fabG NC_007204.1 614306 615034 D 3-oxoacyl-ACP reductase 614306..615034 Psychrobacter arcticus 273-4 3514000 YP_263819.1 CDS acpP NC_007204.1 615347 615583 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 615347..615583 Psychrobacter arcticus 273-4 3514001 YP_263820.1 CDS Psyc_0523 NC_007204.1 615874 616380 D peptidoglycan-binding LysM motif; LysM domain/BON superfamily protein 615874..616380 Psychrobacter arcticus 273-4 3514002 YP_263821.1 CDS Psyc_0524 NC_007204.1 616486 617703 R iron-sulfur binding domain; 4Fe-4S ferredoxin complement(616486..617703) Psychrobacter arcticus 273-4 3514003 YP_263822.1 CDS Psyc_0525 NC_007204.1 617916 619688 D hypothetical protein 617916..619688 Psychrobacter arcticus 273-4 3514004 YP_263823.1 CDS Psyc_0526 NC_007204.1 619858 620346 R hypothetical protein complement(619858..620346) Psychrobacter arcticus 273-4 3514005 YP_263824.1 CDS ilvB NC_007204.1 621124 622950 D catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; acetolactate synthase 3 catalytic subunit 621124..622950 Psychrobacter arcticus 273-4 3514006 YP_263825.1 CDS ilvH NC_007204.1 622950 623447 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 622950..623447 Psychrobacter arcticus 273-4 3514007 YP_263826.1 CDS ilvC NC_007204.1 623594 624610 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 623594..624610 Psychrobacter arcticus 273-4 3514008 YP_263827.1 CDS Psyc_0530 NC_007204.1 625016 625441 D Four transmembrane helices predicted.; hypothetical protein 625016..625441 Psychrobacter arcticus 273-4 3514009 YP_263828.1 CDS cspA NC_007204.1 625818 626030 D Citation: Datta PP, Bhadra RK. Cold shock response and major cold shock proteins of Vibrio cholerae. Appl Environ Microbiol. 2003 Nov;69(11):6361-9. PMID: 14602587 [PubMed - in process]; cold-shock DNA-binding protein family protein 625818..626030 Psychrobacter arcticus 273-4 3514010 YP_263829.1 CDS Psyc_0532 NC_007204.1 626619 627368 D electron transport flavoprotein beta-subunit 626619..627368 Psychrobacter arcticus 273-4 3514011 YP_263830.1 CDS etfA NC_007204.1 627500 628432 D electron transportr flavoprotein subunit alpha 627500..628432 Psychrobacter arcticus 273-4 3514012 YP_263831.1 CDS Psyc_0534 NC_007204.1 628566 629774 R transposase mutator family protein complement(628566..629774) Psychrobacter arcticus 273-4 3514013 YP_263832.1 CDS Psyc_0536 NC_007204.1 630959 631270 D contains fis type helix turn helix motif suggests binding; IS1329/IS3/IS911 transposase 630959..631270 Psychrobacter arcticus 273-4 3514015 YP_263833.1 CDS Psyc_0537 NC_007204.1 631333 632142 D Integrase, catalytic domain; transposase orfAB 631333..632142 Psychrobacter arcticus 273-4 3514016 YP_263834.1 CDS Psyc_0539 NC_007204.1 632473 632748 D IS3/IS911 family transposase OrfA 632473..632748 Psychrobacter arcticus 273-4 3513966 YP_263835.1 CDS Psyc_0540 NC_007204.1 632966 633772 R tRNA/rRNA methyltransferase complement(632966..633772) Psychrobacter arcticus 273-4 3513967 YP_263836.1 CDS fbp NC_007204.1 633876 634859 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(633876..634859) Psychrobacter arcticus 273-4 3513968 YP_263837.1 CDS pyrB NC_007204.1 635285 636358 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 635285..636358 Psychrobacter arcticus 273-4 3513969 YP_263838.1 CDS pyrC NC_007204.1 636419 637630 D This orf is immediately downstream of a strong pyrB homolog.; Citation: J Bacteriol. 1995 April; 177 (7): 1751-1759; dihydroorotase 636419..637630 Psychrobacter arcticus 273-4 3513970 YP_263839.1 CDS Psyc_0544 NC_007204.1 637563 638186 D 4 transmembrane domains predicted; hypothetical protein 637563..638186 Psychrobacter arcticus 273-4 3513971 YP_263840.1 CDS Psyc_0545 NC_007204.1 638292 639173 D There are 9 addittional ORFs identical to this one.; IS4 family transposase 638292..639173 Psychrobacter arcticus 273-4 3513972 YP_263841.1 CDS Psyc_0546 NC_007204.1 639265 640539 R CPA1 family Na(+)/H(+) antiporter complement(639265..640539) Psychrobacter arcticus 273-4 3513973 YP_263842.1 CDS Psyc_0547 NC_007204.1 640580 642259 R hypothetical protein complement(640580..642259) Psychrobacter arcticus 273-4 3513974 YP_263843.1 CDS Psyc_0548 NC_007204.1 642397 643974 R extra 100 aa at carboxy terminus. all 6 transmembrane domains present; tRNA-processing RNAse BN complement(642397..643974) Psychrobacter arcticus 273-4 3513975 YP_263844.1 CDS trpR NC_007204.1 644302 644919 D Trp repressor binding protein 644302..644919 Psychrobacter arcticus 273-4 3513976 YP_263845.1 CDS Psyc_0550 NC_007204.1 644991 645470 D Four transmembrane helices predicted.; hypothetical protein 644991..645470 Psychrobacter arcticus 273-4 3513977 YP_263846.1 CDS Psyc_0551 NC_007204.1 645590 646360 R hypothetical protein complement(645590..646360) Psychrobacter arcticus 273-4 3513978 YP_263847.1 CDS groES NC_007204.1 646903 647193 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 646903..647193 Psychrobacter arcticus 273-4 3513979 YP_263848.1 CDS groEL NC_007204.1 647289 648929 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 647289..648929 Psychrobacter arcticus 273-4 3513980 YP_263849.1 CDS Psyc_0554 NC_007204.1 649273 650085 R hypothetical protein complement(649273..650085) Psychrobacter arcticus 273-4 3513981 YP_263850.1 CDS Psyc_0555 NC_007204.1 650559 651716 D pyridine nucleotide transhydrogenase 650559..651716 Psychrobacter arcticus 273-4 3513982 YP_263851.1 CDS pntA NC_007204.1 651783 652160 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.993) with cleavage site probability 0.936 at residue 22; NAD(P) transhydrogenase subunit alpha 651783..652160 Psychrobacter arcticus 273-4 3513983 YP_263852.1 CDS pntB NC_007204.1 652157 653557 D NAD(P) transhydrogenase subunit beta 652157..653557 Psychrobacter arcticus 273-4 3514488 YP_263853.1 CDS Psyc_0558 NC_007204.1 653710 654264 D hypothetical protein 653710..654264 Psychrobacter arcticus 273-4 3514489 YP_263854.1 CDS Psyc_0559 NC_007204.1 654380 654589 D protein of unknown function DUF528; hypothetical protein 654380..654589 Psychrobacter arcticus 273-4 3514490 YP_263855.1 CDS Psyc_0560 NC_007204.1 654673 655206 D possible transcriptional activator; hypothetical protein 654673..655206 Psychrobacter arcticus 273-4 3514491 YP_263856.1 CDS dapE NC_007204.1 655515 656738 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(655515..656738) Psychrobacter arcticus 273-4 3514492 YP_263857.1 CDS Psyc_0562 NC_007204.1 656824 657582 R oxygenase complement(656824..657582) Psychrobacter arcticus 273-4 3514493 YP_263858.1 CDS Psyc_0563 NC_007204.1 657712 658587 D hypothetical protein 657712..658587 Psychrobacter arcticus 273-4 3514494 YP_263859.1 CDS pssA NC_007204.1 658598 659545 D CDP-diacylglycerol--serine O-phosphatidyltransferase 658598..659545 Psychrobacter arcticus 273-4 3514495 YP_263860.1 CDS Psyc_0565 NC_007204.1 665969 667639 D hypothetical protein 665969..667639 Psychrobacter arcticus 273-4 3514501 YP_263861.1 CDS Psyc_0566 NC_007204.1 667795 668205 D hypothetical protein 667795..668205 Psychrobacter arcticus 273-4 3514502 YP_263862.1 CDS Psyc_0567 NC_007204.1 668274 668738 D hypothetical protein 668274..668738 Psychrobacter arcticus 273-4 3514453 YP_263863.1 CDS Psyc_0568 NC_007204.1 668799 669449 D strong RBS; hypothetical protein 668799..669449 Psychrobacter arcticus 273-4 3514454 YP_263864.1 CDS Psyc_0569 NC_007204.1 669690 670493 R dienelactone hydrolase complement(669690..670493) Psychrobacter arcticus 273-4 3514455 YP_263865.1 CDS katE NC_007204.1 670925 673012 D catalase 670925..673012 Psychrobacter arcticus 273-4 3514456 YP_263866.1 CDS Psyc_0571 NC_007204.1 673444 674226 D Zn-dependent hydrolase 673444..674226 Psychrobacter arcticus 273-4 3514457 YP_263867.1 CDS macB NC_007204.1 675124 677121 R macrolide ABC transporter ATPase/inner membrane protein complement(675124..677121) Psychrobacter arcticus 273-4 3514460 YP_263868.1 CDS macA NC_007204.1 677216 678583 R macrolide secretion protein MacA complement(677216..678583) Psychrobacter arcticus 273-4 3514461 YP_263869.1 CDS holA NC_007204.1 678929 680005 R Citation: Song MS, Pham PT, Olson M, Carter JR, Franden MA, Schaaper RM, McHenry CS. 2001. The delta and delta ' subunits of the DNA polymerase III holoenzyme are essential for initiation complex formation and processive elongation. J Biol Chem. 276:35165-35175.; DNA polymerase III subunit delta complement(678929..680005) Psychrobacter arcticus 273-4 3514462 YP_263870.1 CDS Psyc_0575 NC_007204.1 680078 680737 R possible lipoprotein; hypothetical protein complement(680078..680737) Psychrobacter arcticus 273-4 3514463 YP_263871.1 CDS leuS NC_007204.1 680862 683627 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(680862..683627) Psychrobacter arcticus 273-4 3514464 YP_263872.1 CDS Psyc_0577 NC_007204.1 683738 686623 D pentapeptide repeat motif present; hypothetical protein 683738..686623 Psychrobacter arcticus 273-4 3514465 YP_263873.1 CDS Psyc_0578 NC_007204.1 686620 686991 D aresenate reductase arsC related; hypothetical protein 686620..686991 Psychrobacter arcticus 273-4 3514466 YP_263874.1 CDS argB NC_007204.1 687068 687979 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(687068..687979) Psychrobacter arcticus 273-4 3514467 YP_263875.1 CDS dut NC_007204.1 690109 690573 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(690109..690573) Psychrobacter arcticus 273-4 3514187 YP_263876.1 CDS mgtE NC_007204.1 690708 692111 R Mg/Co/Ni transporter MgtE complement(690708..692111) Psychrobacter arcticus 273-4 3514188 YP_263877.1 CDS uvrD NC_007204.1 692360 694393 R The Rep proteins function as dimers.; ATP-dependent DNA helicase Rep complement(692360..694393) Psychrobacter arcticus 273-4 3514189 YP_263878.1 CDS nuoA NC_007204.1 695360 695983 D NADH dehydrogenase I subunit A 695360..695983 Psychrobacter arcticus 273-4 3514190 YP_263879.1 CDS nuoB NC_007204.1 696173 696841 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 696173..696841 Psychrobacter arcticus 273-4 3514191 YP_263880.1 CDS nuoD NC_007204.1 696972 698747 D NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 696972..698747 Psychrobacter arcticus 273-4 3514192 YP_263881.1 CDS nuoE NC_007204.1 698901 699410 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 698901..699410 Psychrobacter arcticus 273-4 3514193 YP_263882.1 CDS nuoF NC_007204.1 699407 700831 D NADH dehydrogenase I subunit F 699407..700831 Psychrobacter arcticus 273-4 3514194 YP_263883.1 CDS nuoG NC_007204.1 700842 703934 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 700842..703934 Psychrobacter arcticus 273-4 3514195 YP_263884.1 CDS nuoH NC_007204.1 703936 704979 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 703936..704979 Psychrobacter arcticus 273-4 3514196 YP_263885.1 CDS nuoI NC_007204.1 705035 705583 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 705035..705583 Psychrobacter arcticus 273-4 3514197 YP_263886.1 CDS nuoJ NC_007204.1 705580 706299 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.676) with cleavage site probability 0.328 at residue 32; NADH dehydrogenase I subunit J 705580..706299 Psychrobacter arcticus 273-4 3514198 YP_263887.1 CDS nouK NC_007204.1 706299 706706 D NADH dehydrogenase I subunit K 706299..706706 Psychrobacter arcticus 273-4 3514199 YP_263888.1 CDS nuoL NC_007204.1 706711 708585 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 706711..708585 Psychrobacter arcticus 273-4 3514200 YP_263889.1 CDS nuoM NC_007204.1 708587 710212 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 708587..710212 Psychrobacter arcticus 273-4 3514201 YP_263890.1 CDS nuoN NC_007204.1 710216 711694 D NADH dehydrogenase I subunit N 710216..711694 Psychrobacter arcticus 273-4 3514202 YP_263891.1 CDS Psyc_0597 NC_007204.1 712013 712843 D ferredoxin-NADP reductase 712013..712843 Psychrobacter arcticus 273-4 3514203 YP_263892.1 CDS Psyc_0598 NC_007204.1 712969 713775 R hypothetical protein complement(712969..713775) Psychrobacter arcticus 273-4 3514204 YP_263893.1 CDS Psyc_0599 NC_007204.1 714070 714948 D IS30 family transposase 714070..714948 Psychrobacter arcticus 273-4 3514205 YP_263894.1 CDS Psyc_0600 NC_007204.1 714998 715168 D hypothetical protein 714998..715168 Psychrobacter arcticus 273-4 3514397 YP_263895.1 CDS Psyc_0601 NC_007204.1 715517 716998 D MFS nitrate/nitrite transporter 715517..716998 Psychrobacter arcticus 273-4 3514398 YP_263896.1 CDS narL NC_007204.1 717103 717762 R nitrate/nitrite response regulator complement(717103..717762) Psychrobacter arcticus 273-4 3514399 YP_263897.1 CDS narX NC_007204.1 717864 719987 R could also be NarQ unclear but narGHJI present suggesting NarX (Biochem Soc Trans. 2003 Feb;31(Pt 1):1-10.); signal transduction histidine kinase sensor complement(717864..719987) Psychrobacter arcticus 273-4 3514400 YP_263898.1 CDS narK NC_007204.1 720320 721699 D MFS nitrate/nitrite transporter NarK 720320..721699 Psychrobacter arcticus 273-4 3514401 YP_263899.1 CDS narG NC_007204.1 722205 725963 D respiratory nitrate reductase subunit alpha apoprotein 722205..725963 Psychrobacter arcticus 273-4 3514402 YP_263900.1 CDS narH NC_007204.1 726003 727541 D respiratory nitrate reductase subunit beta 726003..727541 Psychrobacter arcticus 273-4 3514403 YP_263901.1 CDS narJ NC_007204.1 727543 728412 D respiratory nitrate reductase chaperone NarJ 727543..728412 Psychrobacter arcticus 273-4 3514404 YP_263902.1 CDS narI NC_007204.1 728427 729152 D respiratory nitrate reductase subunit gamma 728427..729152 Psychrobacter arcticus 273-4 3514405 YP_263903.1 CDS Psyc_0609 NC_007204.1 729309 730340 D peptidyl-prolyl cis-trans isomerase 729309..730340 Psychrobacter arcticus 273-4 3514406 YP_263904.1 CDS moeA NC_007204.1 730531 731826 D molybdopterin molybdochelatase 730531..731826 Psychrobacter arcticus 273-4 3514407 YP_263905.1 CDS moaA NC_007204.1 732013 733122 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 732013..733122 Psychrobacter arcticus 273-4 3514408 YP_263906.1 CDS moaB2 NC_007204.1 733243 733773 D molybdenum cofactor biosynthesis protein 733243..733773 Psychrobacter arcticus 273-4 3514409 YP_263907.1 CDS Psyc_0613 NC_007204.1 733766 734563 D Possible Molybdopterin-guanine dinucleotide biosynthesis protein A, MobA.; molybdenum cofactor guanylyltransferase 733766..734563 Psychrobacter arcticus 273-4 3514410 YP_263908.1 CDS moaC NC_007204.1 734553 735140 D GTP cyclohydrolase subunit MoaC 734553..735140 Psychrobacter arcticus 273-4 3514411 YP_263909.1 CDS moaD NC_007204.1 735201 735464 D molybdopterin converting factor, small subunit 735201..735464 Psychrobacter arcticus 273-4 3514412 YP_263910.1 CDS moaE NC_007204.1 735578 736132 D molybdopterin synthase subunit MoaE 735578..736132 Psychrobacter arcticus 273-4 3514413 YP_263911.1 CDS modA NC_007204.1 736294 737184 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.983) with cleavage site probability 0.975 at residue 43; molybdenum ABC transporter periplasmic binding protein ModA 736294..737184 Psychrobacter arcticus 273-4 3514414 YP_263912.1 CDS modB NC_007204.1 737356 738057 D molybdenum ABC transporter inner membrane protein ModB 737356..738057 Psychrobacter arcticus 273-4 3514415 YP_263913.1 CDS Psyc_0619 NC_007204.1 738182 738691 R -capitalized Hypo; hypothetical protein complement(738182..738691) Psychrobacter arcticus 273-4 3514741 YP_263914.1 CDS Psyc_0620 NC_007204.1 738723 739163 D 4 transmembrane helices; hypothetical protein 738723..739163 Psychrobacter arcticus 273-4 3514742 YP_263915.1 CDS Psyc_0621 NC_007204.1 739307 739723 D probable bacterial transmembrane pair; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.881) with cleavage site probability 0.867 at residue 32; hypothetical protein 739307..739723 Psychrobacter arcticus 273-4 3514743 YP_263916.1 CDS Psyc_0622 NC_007204.1 739853 740506 R DSBA oxidoreductase complement(739853..740506) Psychrobacter arcticus 273-4 3514744 YP_263917.1 CDS Psyc_0624 NC_007204.1 741705 742676 D hypothetical protein 741705..742676 Psychrobacter arcticus 273-4 3514746 YP_263918.1 CDS Psyc_0625 NC_007204.1 742743 743618 D small-conductance mechanosensitive ion channel 742743..743618 Psychrobacter arcticus 273-4 3514747 YP_263919.1 CDS Psyc_0626 NC_007204.1 743615 744235 R hypothetical protein complement(743615..744235) Psychrobacter arcticus 273-4 3514748 YP_263920.1 CDS Psyc_0627 NC_007204.1 744336 745421 R PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation and belongings to the phosphate regulon (pho) in Escherichia coli; PhoH-like protein, ATPase complement(744336..745421) Psychrobacter arcticus 273-4 3514749 YP_263921.1 CDS ubiH NC_007204.1 746234 747538 D 2-octaprenyl-6-methoxyphenol hydroxylase 746234..747538 Psychrobacter arcticus 273-4 3514750 YP_263922.1 CDS Psyc_0629 NC_007204.1 747795 749096 D 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 747795..749096 Psychrobacter arcticus 273-4 3514751 YP_263923.1 CDS Psyc_0630 NC_007204.1 749101 750012 R Membrane protein of unknown function DUF340; hypothetical protein complement(749101..750012) Psychrobacter arcticus 273-4 3514752 YP_263924.1 CDS nadB NC_007204.1 750054 751943 R L-aspartate oxidase complement(750054..751943) Psychrobacter arcticus 273-4 3514753 YP_263925.1 CDS nadA NC_007204.1 751945 753084 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(751945..753084) Psychrobacter arcticus 273-4 3514754 YP_263926.1 CDS Psyc_0633 NC_007204.1 753357 754451 D hypothetical protein 753357..754451 Psychrobacter arcticus 273-4 3514755 YP_263927.1 CDS nadC NC_007204.1 754628 755488 D nicotinate-nucleotide pyrophosphorylase 754628..755488 Psychrobacter arcticus 273-4 3514756 YP_263928.1 CDS Psyc_0635 NC_007204.1 755911 756516 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.949) with cleavage site probability 0.946 at residue 47; multiple antibiotic resistance (MarC)-like proteins 755911..756516 Psychrobacter arcticus 273-4 3514757 YP_263929.1 CDS Psyc_0636 NC_007204.1 756847 757113 D IS3 family transposase 756847..757113 Psychrobacter arcticus 273-4 3514758 YP_263930.1 CDS Psyc_0637 NC_007204.1 757185 757934 D transposase OrfB 757185..757934 Psychrobacter arcticus 273-4 3514759 YP_263931.1 CDS Psyc_0638 NC_007204.1 758105 760048 R acyltransferase complement(758105..760048) Psychrobacter arcticus 273-4 3514378 YP_263932.1 CDS Psyc_0639 NC_007204.1 760140 760406 D IS3 family transposase 760140..760406 Psychrobacter arcticus 273-4 3514379 YP_263933.1 CDS Psyc_0640 NC_007204.1 760478 761227 D transposase OrfB 760478..761227 Psychrobacter arcticus 273-4 3514380 YP_263934.1 CDS Psyc_0641 NC_007204.1 761434 761790 D similar to sp|022008; bactoprenol-linked glucose translocase (flippase) 761434..761790 Psychrobacter arcticus 273-4 3514381 YP_263935.1 CDS yfdH NC_007204.1 761794 762708 D glycosyl transferase family protein 761794..762708 Psychrobacter arcticus 273-4 3514382 YP_263936.1 CDS Psyc_0643 NC_007204.1 762710 764374 D hypothetical protein 762710..764374 Psychrobacter arcticus 273-4 3514383 YP_263937.1 CDS Psyc_0644 NC_007204.1 764656 764955 D IS3/IS911 family transposase OrfA 764656..764955 Psychrobacter arcticus 273-4 3514384 YP_263938.1 CDS Psyc_0645 NC_007204.1 765000 765902 D IS30 family transposase 765000..765902 Psychrobacter arcticus 273-4 3514385 YP_263939.1 CDS Psyc_0646 NC_007204.1 766279 767226 R ribosomal large subunit pseudouridine synthase B complement(766279..767226) Psychrobacter arcticus 273-4 3514386 YP_263940.1 CDS wza NC_007204.1 767827 768903 D OMA family; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.928 at residue 29; polysaccharide export system, outer membrane component 767827..768903 Psychrobacter arcticus 273-4 3514387 YP_263941.1 CDS epsP NC_007204.1 768923 769354 D protein tyrosine phosphatase 768923..769354 Psychrobacter arcticus 273-4 3514388 YP_263942.1 CDS Psyc_0649 NC_007204.1 769434 771695 D lipopolysaccharide biosynthesis tyrosine kinase 769434..771695 Psychrobacter arcticus 273-4 3514389 YP_263943.1 CDS Psyc_0650 NC_007204.1 771887 773164 D UDP-glucose/GDP-mannose dehydrogenase 771887..773164 Psychrobacter arcticus 273-4 3514390 YP_263944.1 CDS Psyc_0651 NC_007204.1 773340 774374 D NAD-dependent epimerase 773340..774374 Psychrobacter arcticus 273-4 3514391 YP_263945.1 CDS Psyc_0652 NC_007204.1 774394 776193 D ABC transporter ATP-binding protein 774394..776193 Psychrobacter arcticus 273-4 3514392 YP_263946.1 CDS capD NC_007204.1 776379 777377 D polysaccharide biosynthesis protein CapD 776379..777377 Psychrobacter arcticus 273-4 3514393 YP_263947.1 CDS Psyc_0654 NC_007204.1 777378 778535 D DegT/DnrJ/EryC1/StrS aminotransferase 777378..778535 Psychrobacter arcticus 273-4 3514394 YP_263948.1 CDS Psyc_0655 NC_007204.1 778547 779587 D glycosyl transferase family protein 778547..779587 Psychrobacter arcticus 273-4 3514395 YP_263949.1 CDS neuA2 NC_007204.1 779584 780270 D acylneuraminate cytidylyltransferase 779584..780270 Psychrobacter arcticus 273-4 3514396 YP_263950.1 CDS Psyc_0657 NC_007204.1 780321 781370 D polysaccharide biosynthesis protein 780321..781370 Psychrobacter arcticus 273-4 3514017 YP_263951.1 CDS Psyc_0658 NC_007204.1 781351 781863 D hypothetical protein 781351..781863 Psychrobacter arcticus 273-4 3514018 YP_263952.1 CDS Psyc_0659 NC_007204.1 781860 782537 D methionyl-tRNA formyltransferase 781860..782537 Psychrobacter arcticus 273-4 3514019 YP_263953.1 CDS Psyc_0660 NC_007204.1 782538 783587 D most likely carbohydrate biosynthesis; N-acetylneuraminate synthase 782538..783587 Psychrobacter arcticus 273-4 3514020 YP_263954.1 CDS Psyc_0661 NC_007204.1 783580 784248 D LmbE-like protein 783580..784248 Psychrobacter arcticus 273-4 3514021 YP_263955.1 CDS Psyc_0662 NC_007204.1 784248 784832 D N-acetylneuraminate synthase 784248..784832 Psychrobacter arcticus 273-4 3514022 YP_263956.1 CDS Psyc_0663 NC_007204.1 784968 785879 D alpha-2,3-sialyltransferase 784968..785879 Psychrobacter arcticus 273-4 3514023 YP_263957.1 CDS Psyc_0664 NC_007204.1 786060 787145 D group 1 glycosyl transferase 786060..787145 Psychrobacter arcticus 273-4 3514024 YP_263958.1 CDS asnB NC_007204.1 787145 789016 D There are two asparagine synthase genes present in the Psychrobacter 273-4 genome.; asparagine synthase 787145..789016 Psychrobacter arcticus 273-4 3514025 YP_263959.1 CDS Psyc_0666 NC_007204.1 789071 790270 D hypothetical protein 789071..790270 Psychrobacter arcticus 273-4 3514026 YP_263960.1 CDS Psyc_0667 NC_007204.1 790409 791491 D group 1 glycosyl transferase 790409..791491 Psychrobacter arcticus 273-4 3514027 YP_263961.1 CDS wbpS NC_007204.1 791494 793449 D There are two asparagine synthases in the Psychrobacter 273-4 genome.; asparagine synthase 791494..793449 Psychrobacter arcticus 273-4 3514028 YP_263962.1 CDS Psyc_0669 NC_007204.1 793474 794670 D hypothetical protein 793474..794670 Psychrobacter arcticus 273-4 3514029 YP_263963.1 CDS Psyc_0670 NC_007204.1 794672 795787 D group 1 glycosyl transferase 794672..795787 Psychrobacter arcticus 273-4 3514030 YP_263964.1 CDS rfbP1 NC_007204.1 796077 797324 D sugar transferase 796077..797324 Psychrobacter arcticus 273-4 3514031 YP_263965.1 CDS Psyc_0672 NC_007204.1 797379 798857 D Citation: possible Binding-protein-dependent transport systems inner membrane component domain though these are usually located at c-term; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.941 at residue 32; hypothetical protein 797379..798857 Psychrobacter arcticus 273-4 3514032 YP_263966.1 CDS folD NC_007204.1 799533 800420 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 799533..800420 Psychrobacter arcticus 273-4 3514033 YP_263967.1 CDS corA NC_007204.1 800634 801848 R magnesium and cobalt transport protein CorA complement(800634..801848) Psychrobacter arcticus 273-4 3514034 YP_263968.1 CDS Psyc_0675 NC_007204.1 801929 802318 R hypothetical protein complement(801929..802318) Psychrobacter arcticus 273-4 3514035 YP_263969.1 CDS Psyc_0676 NC_007204.1 802862 804166 D Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 802862..804166 Psychrobacter arcticus 273-4 3514036 YP_263970.1 CDS purA NC_007204.1 804274 805563 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 804274..805563 Psychrobacter arcticus 273-4 3516137 YP_263971.1 CDS ndk NC_007204.1 805877 806308 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 805877..806308 Psychrobacter arcticus 273-4 3516138 YP_263972.1 CDS Psyc_0679 NC_007204.1 806786 808015 D Other members of this family also contain the Radical SAM domain in central portion of protein generate a radical species by reductive cleavage of S:-adenosylmethionine (SAM) through an unusual Fe-S center; hypothetical protein 806786..808015 Psychrobacter arcticus 273-4 3516139 YP_263973.1 CDS pilF NC_007204.1 808500 809447 D TPR repeat implicated to be involved in protein-protein interaction; type 4 fimbrial biogenesis protein 808500..809447 Psychrobacter arcticus 273-4 3516140 YP_263974.1 CDS Psyc_0681 NC_007204.1 809438 810259 D hypothetical protein 809438..810259 Psychrobacter arcticus 273-4 3516141 YP_263975.1 CDS ispG NC_007204.1 810359 811474 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 810359..811474 Psychrobacter arcticus 273-4 3516142 YP_263976.1 CDS hisS NC_007204.1 811539 812867 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 811539..812867 Psychrobacter arcticus 273-4 3516143 YP_263977.1 CDS Psyc_0684 NC_007204.1 812919 813713 D hypothetical protein 812919..813713 Psychrobacter arcticus 273-4 3516144 YP_263978.1 CDS Psyc_0685 NC_007204.1 813968 815131 D possible bacterial quinoprotein; hypothetical protein 813968..815131 Psychrobacter arcticus 273-4 3516145 YP_263979.1 CDS engA NC_007204.1 815568 816989 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 815568..816989 Psychrobacter arcticus 273-4 3516146 YP_263980.1 CDS dacC NC_007204.1 817287 818453 R penicillin-binding protein 6 complement(817287..818453) Psychrobacter arcticus 273-4 3516147 YP_263981.1 CDS Psyc_0688 NC_007204.1 818950 819387 R Signal peptide predicted.; hypothetical protein complement(818950..819387) Psychrobacter arcticus 273-4 3516148 YP_263982.1 CDS Psyc_0689 NC_007204.1 819884 820171 D hypothetical protein 819884..820171 Psychrobacter arcticus 273-4 3516149 YP_263983.1 CDS Psyc_0690 NC_007204.1 820256 821074 D Probable membrane bound metallopeptidase; Citation: Members of this family are zinc metallopeptidases with a range of specificities.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.994) with cleavage site probability 0.511 at residue 23; hypothetical protein 820256..821074 Psychrobacter arcticus 273-4 3516150 YP_263984.1 CDS Psyc_0691 NC_007204.1 821152 822456 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.591 at residue 25; membrane-bound lytic murein transglycosylase 821152..822456 Psychrobacter arcticus 273-4 3516151 YP_263985.1 CDS Psyc_0692 NC_007204.1 822617 823477 R catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase complement(822617..823477) Psychrobacter arcticus 273-4 3516152 YP_263986.1 CDS ppiB NC_007204.1 823547 824062 R cyclophilin type peptidyl-prolyl cis-trans isomerase complement(823547..824062) Psychrobacter arcticus 273-4 3516153 YP_263987.1 CDS glnS NC_007204.1 824421 826160 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 824421..826160 Psychrobacter arcticus 273-4 3516154 YP_263988.1 CDS Psyc_0695 NC_007204.1 826438 827184 D hypothetical protein 826438..827184 Psychrobacter arcticus 273-4 3516155 YP_263989.1 CDS Psyc_0696 NC_007204.1 827474 828112 D 1-Cys peroxiredoxin 827474..828112 Psychrobacter arcticus 273-4 3516156 YP_263990.1 CDS Psyc_0697 NC_007204.1 828401 829063 D glutathione S-transferase 828401..829063 Psychrobacter arcticus 273-4 3516157 YP_263991.1 CDS Psyc_0698 NC_007204.1 829537 830436 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.791 at residue 23; hypothetical protein 829537..830436 Psychrobacter arcticus 273-4 3516158 YP_263992.1 CDS ruvC NC_007204.1 830680 831264 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(830680..831264) Psychrobacter arcticus 273-4 3516159 YP_263993.1 CDS yjeG NC_007204.1 831417 832034 D inner membrane protein FxsA 831417..832034 Psychrobacter arcticus 273-4 3516160 YP_263994.1 CDS pgm NC_007204.1 832603 834261 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 832603..834261 Psychrobacter arcticus 273-4 3516161 YP_263995.1 CDS Psyc_0702 NC_007204.1 834959 836263 D hypothetical protein 834959..836263 Psychrobacter arcticus 273-4 3516162 YP_263996.1 CDS Psyc_0703 NC_007204.1 836624 837259 R Domain arrangement suggests belongs to two-component sensory transduction system activated by phosphorylation by a transmembrane kinase. The proteins that belong to this class include bvgA, comA, dctR; degU, evgA, fimZ, fixJ, gacA, glpR, narL, narP, nodW; LuxR family transcriptional regulator complement(836624..837259) Psychrobacter arcticus 273-4 3516163 YP_263997.1 CDS Psyc_0704 NC_007204.1 837666 838757 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.982 at residue 27; murein-DD-endopeptidase 837666..838757 Psychrobacter arcticus 273-4 3516164 YP_263998.1 CDS thiE NC_007204.1 838875 839585 D thiamine monophosphate synthase 838875..839585 Psychrobacter arcticus 273-4 3516165 YP_263999.1 CDS pgk NC_007204.1 839849 841051 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 839849..841051 Psychrobacter arcticus 273-4 3516166 YP_264000.1 CDS Psyc_0707 NC_007204.1 841312 841611 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.867 at residue 23; hypothetical protein 841312..841611 Psychrobacter arcticus 273-4 3516167 YP_264001.1 CDS fba NC_007204.1 842052 843089 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 842052..843089 Psychrobacter arcticus 273-4 3516168 YP_264002.1 CDS ruvA NC_007204.1 843168 843791 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 843168..843791 Psychrobacter arcticus 273-4 3516169 YP_264003.1 CDS ruvB NC_007204.1 843964 844959 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 843964..844959 Psychrobacter arcticus 273-4 3516170 YP_264004.1 CDS Psyc_0711 NC_007204.1 845085 846746 R 2-octaprenylphenol hydroxylase complement(845085..846746) Psychrobacter arcticus 273-4 3516171 YP_264005.1 CDS Psyc_0712 NC_007204.1 846804 847499 R hypothetical protein complement(846804..847499) Psychrobacter arcticus 273-4 3516172 YP_264006.1 CDS ubiE NC_007204.1 847749 848873 R Extra 120 amino acids at N-terminus compared to homologs.; 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase complement(847749..848873) Psychrobacter arcticus 273-4 3516173 YP_264007.1 CDS Psyc_0714 NC_007204.1 848955 849665 R hypothetical protein complement(848955..849665) Psychrobacter arcticus 273-4 3516174 YP_264008.1 CDS Psyc_0715 NC_007204.1 849949 851604 D Protein of unknown function DUF344; polyphosphate:AMP phosphotransferase 849949..851604 Psychrobacter arcticus 273-4 3516175 YP_264009.1 CDS Psyc_0716 NC_007204.1 851996 853603 D inorganic phosphate transporter 851996..853603 Psychrobacter arcticus 273-4 3514560 YP_264010.1 CDS Psyc_0717 NC_007204.1 853728 855368 R in Corynebacterium glutamicum the aminotransferase can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; this protein contains a helix-turn-helix domain at the N-terminus; bifunctional HTH-domain containing protein/aminotransferase complement(853728..855368) Psychrobacter arcticus 273-4 3514561 YP_264011.1 CDS Psyc_0718 NC_007204.1 855959 856384 D Have a SelR domain; hypothetical protein 855959..856384 Psychrobacter arcticus 273-4 3514562 YP_264012.1 CDS Psyc_0719 NC_007204.1 857655 860012 D Signal transduction histidine kinase sensor 857655..860012 Psychrobacter arcticus 273-4 3514565 YP_264013.1 CDS Psyc_0720 NC_007204.1 860046 860984 D adjacent gene is histidine kinase; Fis family transcriptional regulator 860046..860984 Psychrobacter arcticus 273-4 3514566 YP_264014.1 CDS Psyc_0721 NC_007204.1 861448 861783 D hypothetical protein 861448..861783 Psychrobacter arcticus 273-4 3514567 YP_264015.1 CDS Psyc_0727 NC_007204.1 865068 867113 R BCCT family choline/carnitine/betaine transporter complement(865068..867113) Psychrobacter arcticus 273-4 3514573 YP_264016.1 CDS betA NC_007204.1 867331 869031 R catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase complement(867331..869031) Psychrobacter arcticus 273-4 3514574 YP_264017.1 CDS betB NC_007204.1 869114 870616 R catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase complement(869114..870616) Psychrobacter arcticus 273-4 3514575 YP_264018.1 CDS Psyc_0730 NC_007204.1 870804 871367 R TetR family transcriptional regulator complement(870804..871367) Psychrobacter arcticus 273-4 3514576 YP_264019.1 CDS Psyc_0731 NC_007204.1 871371 871715 R small multidrug efflux pump complement(871371..871715) Psychrobacter arcticus 273-4 3514577 YP_264020.1 CDS Psyc_0732 NC_007204.1 873083 873598 R hypothetical protein complement(873083..873598) Psychrobacter arcticus 273-4 3514578 YP_264021.1 CDS recJ NC_007204.1 873984 875810 D exonuclease RecJ 873984..875810 Psychrobacter arcticus 273-4 3514579 YP_264022.1 CDS Psyc_0734 NC_007204.1 875841 876503 R strong RBS found; predicted membrane protein; hypothetical protein complement(875841..876503) Psychrobacter arcticus 273-4 3514580 YP_264023.1 CDS Psyc_0735 NC_007204.1 876785 877876 R Signal peptide and 9 transmembrane helices predicted.; hypothetical protein complement(876785..877876) Psychrobacter arcticus 273-4 3514581 YP_264024.1 CDS Psyc_0736 NC_007204.1 878072 878806 R radical activating enzyme complement(878072..878806) Psychrobacter arcticus 273-4 3514582 YP_264025.1 CDS dapD NC_007204.1 879028 879849 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(879028..879849) Psychrobacter arcticus 273-4 3514583 YP_264026.1 CDS Psyc_0738 NC_007204.1 879961 880893 R Esterase/lipase/thioesterase, active site; lysophospholipase complement(879961..880893) Psychrobacter arcticus 273-4 3514584 YP_264027.1 CDS Psyc_0739 NC_007204.1 881704 883416 D hypothetical protein 881704..883416 Psychrobacter arcticus 273-4 3514586 YP_264028.1 CDS Psyc_0740 NC_007204.1 883454 884491 D hypothetical protein 883454..884491 Psychrobacter arcticus 273-4 3514587 YP_264029.1 CDS cfa NC_007204.1 884571 885935 D cyclopropane-fatty-acyl-phospholipid synthase 884571..885935 Psychrobacter arcticus 273-4 3514588 YP_264030.1 CDS Psyc_0742 NC_007204.1 885973 886383 D Possible membrane protein; hypothetical protein 885973..886383 Psychrobacter arcticus 273-4 3514242 YP_264031.1 CDS Psyc_0743 NC_007204.1 886489 887052 D acyl-CoA thioester hydrolase 886489..887052 Psychrobacter arcticus 273-4 3514243 YP_264032.1 CDS uvrB NC_007204.1 887460 889571 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 887460..889571 Psychrobacter arcticus 273-4 3514244 YP_264033.1 CDS Psyc_0745 NC_007204.1 889885 890271 R Possible lipoprotein, signal peptide predicted.; hypothetical protein complement(889885..890271) Psychrobacter arcticus 273-4 3514245 YP_264034.1 CDS Psyc_0746 NC_007204.1 891023 892057 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.499 at residue 28; TRAP-T family transporter periplasmic substrate binding subunit 891023..892057 Psychrobacter arcticus 273-4 3514246 YP_264035.1 CDS Psyc_0747 NC_007204.1 892128 892595 D hypothetical protein 892128..892595 Psychrobacter arcticus 273-4 3514247 YP_264036.1 CDS Psyc_0748 NC_007204.1 892567 894651 D TRAP-T family transporter fused inner membrane subunits 892567..894651 Psychrobacter arcticus 273-4 3514248 YP_264037.1 CDS lipA NC_007204.1 894786 895829 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(894786..895829) Psychrobacter arcticus 273-4 3514249 YP_264038.1 CDS Psyc_0750 NC_007204.1 895992 896441 R involved in protocatechuate catabolism; carboxymuconolactone decarboxylase complement(895992..896441) Psychrobacter arcticus 273-4 3514250 YP_264039.1 CDS acnB NC_007204.1 897067 899670 D catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 897067..899670 Psychrobacter arcticus 273-4 3514251 YP_264040.1 CDS Psyc_0753 NC_007204.1 900837 901634 R enoyl-CoA hydratase complement(900837..901634) Psychrobacter arcticus 273-4 3514253 YP_264041.1 CDS Psyc_0754 NC_007204.1 901683 901910 D hypothetical protein 901683..901910 Psychrobacter arcticus 273-4 3514254 YP_264042.1 CDS Psyc_0755 NC_007204.1 901935 903077 R hypothetical protein complement(901935..903077) Psychrobacter arcticus 273-4 3514255 YP_264043.1 CDS Psyc_0756 NC_007204.1 903074 904267 R hypothetical protein complement(903074..904267) Psychrobacter arcticus 273-4 3514256 YP_264044.1 CDS Psyc_0757 NC_007204.1 904330 905139 R possible hydrolase of the HAD superfamily; hypothetical protein complement(904330..905139) Psychrobacter arcticus 273-4 3514257 YP_264045.1 CDS Psyc_0758 NC_007204.1 905500 906771 R RBS found; hypothetical protein complement(905500..906771) Psychrobacter arcticus 273-4 3514258 YP_264046.1 CDS Psyc_0759 NC_007204.1 906907 908082 R hypothetical protein complement(906907..908082) Psychrobacter arcticus 273-4 3514259 YP_264047.1 CDS terA NC_007204.1 908547 909806 D Response to stress; tellurium resistance protein 908547..909806 Psychrobacter arcticus 273-4 3514260 YP_264048.1 CDS Psyc_0761 NC_007204.1 910065 910673 R Bacterial stress protein; tellurium resitance protein TerZ complement(910065..910673) Psychrobacter arcticus 273-4 3514261 YP_264049.1 CDS Psyc_0762 NC_007204.1 910708 911460 R strong RBS found; hypothetical protein complement(910708..911460) Psychrobacter arcticus 273-4 3514262 YP_264050.1 CDS Psyc_0763 NC_007204.1 911675 912250 R Bacterial stress protein; tellurium resistance TerD complement(911675..912250) Psychrobacter arcticus 273-4 3514263 YP_264051.1 CDS Psyc_0764 NC_007204.1 912863 913930 R hypothetical protein complement(912863..913930) Psychrobacter arcticus 273-4 3514264 YP_264052.1 CDS Psyc_0765 NC_007204.1 914192 914767 R Stress protein; tellurium resistance protein complement(914192..914767) Psychrobacter arcticus 273-4 3514265 YP_264053.1 CDS rlmL NC_007204.1 915171 917477 R catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase complement(915171..917477) Psychrobacter arcticus 273-4 3514266 YP_264054.1 CDS Psyc_0767 NC_007204.1 917799 919004 R small-conductance mechanosensitive ion channel complement(917799..919004) Psychrobacter arcticus 273-4 3514267 YP_264055.1 CDS Psyc_0768 NC_007204.1 919073 920608 R Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(919073..920608) Psychrobacter arcticus 273-4 3514268 YP_264056.1 CDS Psyc_0769 NC_007204.1 920662 921162 R peroxiredoxin complement(920662..921162) Psychrobacter arcticus 273-4 3514269 YP_264057.1 CDS Psyc_0770 NC_007204.1 921321 921650 R Signal peptide predicted; hypothetical protein complement(921321..921650) Psychrobacter arcticus 273-4 3514270 YP_264058.1 CDS exsB NC_007204.1 921923 922780 R exoenzyme S synthesis protein B complement(921923..922780) Psychrobacter arcticus 273-4 3514271 YP_264059.1 CDS Psyc_0772 NC_007204.1 923085 924230 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 923085..924230 Psychrobacter arcticus 273-4 3514272 YP_264060.1 CDS Psyc_0773 NC_007204.1 924331 924912 R hypothetical protein complement(924331..924912) Psychrobacter arcticus 273-4 3514273 YP_264061.1 CDS Psyc_0774 NC_007204.1 925059 926468 R 4Fe-4S ferredoxin domain found; hypothetical protein complement(925059..926468) Psychrobacter arcticus 273-4 3514274 YP_264062.1 CDS Psyc_0775 NC_007204.1 927020 928144 R cytochrome c oxidase cbb3-type subunit III complement(927020..928144) Psychrobacter arcticus 273-4 3514275 YP_264063.1 CDS Psyc_0776 NC_007204.1 928144 928323 R cytochrome C, oxidase component complement(928144..928323) Psychrobacter arcticus 273-4 3514276 YP_264064.1 CDS Psyc_0777 NC_007204.1 928323 928961 R CcoO; FixO; cbb3-type cytochrome c oxidase subunit II complement(928323..928961) Psychrobacter arcticus 273-4 3514277 YP_264065.1 CDS Psyc_0778 NC_007204.1 928971 930452 R CcoN; FixN; cbb3-type cytochrome c oxidase subunit I complement(928971..930452) Psychrobacter arcticus 273-4 3514278 YP_264066.1 CDS Psyc_0779 NC_007204.1 931329 931718 D hypothetical protein 931329..931718 Psychrobacter arcticus 273-4 3514279 YP_264067.1 CDS Psyc_0780 NC_007204.1 931838 932806 R hypothetical protein complement(931838..932806) Psychrobacter arcticus 273-4 3514628 YP_264068.1 CDS lolE NC_007204.1 933257 934492 D lipoprotein ABC transporter inner membrane protein LolE 933257..934492 Psychrobacter arcticus 273-4 3514629 YP_264069.1 CDS lolD NC_007204.1 934537 935217 D lipoprotein ABC transporter ATPase LolD 934537..935217 Psychrobacter arcticus 273-4 3514630 YP_264070.1 CDS Psyc_0783 NC_007204.1 935277 935585 D hypothetical protein 935277..935585 Psychrobacter arcticus 273-4 3514631 YP_264071.1 CDS Psyc_0784 NC_007204.1 935595 936188 R 4 transmembrane helices; hypothetical protein complement(935595..936188) Psychrobacter arcticus 273-4 3514632 YP_264072.1 CDS Psyc_0785 NC_007204.1 936587 939547 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.990) with cleavage site probability 0.913 at residue 21; competence protein, ComEC 936587..939547 Psychrobacter arcticus 273-4 3514633 YP_264073.1 CDS sppA NC_007204.1 939936 940991 D signal peptide peptidase 939936..940991 Psychrobacter arcticus 273-4 3514634 YP_264074.1 CDS Psyc_0787 NC_007204.1 941117 942007 D hydrolase 941117..942007 Psychrobacter arcticus 273-4 3514635 YP_264075.1 CDS Psyc_0788 NC_007204.1 942107 942904 D 7 transmembrane helices; hypothetical protein 942107..942904 Psychrobacter arcticus 273-4 3514636 YP_264076.1 CDS Psyc_0789 NC_007204.1 942973 943944 R tRNA-dihydrouridine synthase A complement(942973..943944) Psychrobacter arcticus 273-4 3514637 YP_264077.1 CDS Psyc_0790 NC_007204.1 944232 945533 R major facilitator transporter complement(944232..945533) Psychrobacter arcticus 273-4 3514638 YP_264078.1 CDS Psyc_0791 NC_007204.1 945739 947451 R phospholipase D complement(945739..947451) Psychrobacter arcticus 273-4 3514639 YP_264079.1 CDS metZ NC_007204.1 947894 949168 D cystathionine gamma-synthase 947894..949168 Psychrobacter arcticus 273-4 3514640 YP_264080.1 CDS Psyc_0793 NC_007204.1 949252 949581 D hypothetical protein 949252..949581 Psychrobacter arcticus 273-4 3514641 YP_264081.1 CDS recR NC_007204.1 949693 950286 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 949693..950286 Psychrobacter arcticus 273-4 3514642 YP_264082.1 CDS rnd NC_007204.1 950427 951725 D ribonuclease D 950427..951725 Psychrobacter arcticus 273-4 3514643 YP_264083.1 CDS gcvP NC_007204.1 952044 954941 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(952044..954941) Psychrobacter arcticus 273-4 3514644 YP_264084.1 CDS Psyc_0797 NC_007204.1 955005 955817 R nitroreductase family protein complement(955005..955817) Psychrobacter arcticus 273-4 3514645 YP_264085.1 CDS gcvH NC_007204.1 956080 956460 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(956080..956460) Psychrobacter arcticus 273-4 3514646 YP_264086.1 CDS gcvT NC_007204.1 956527 957699 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(956527..957699) Psychrobacter arcticus 273-4 3514647 YP_264087.1 CDS Psyc_0800 NC_007204.1 958574 958897 D hypothetical protein 958574..958897 Psychrobacter arcticus 273-4 3514648 YP_264088.1 CDS Psyc_0801 NC_007204.1 959112 959699 D 3 transmembrane helices; hypothetical protein 959112..959699 Psychrobacter arcticus 273-4 3514649 YP_264089.1 CDS Psyc_0802 NC_007204.1 960079 960933 D ATPase AAA 960079..960933 Psychrobacter arcticus 273-4 3514650 YP_264090.1 CDS Psyc_0803 NC_007204.1 961011 962234 D hypothetical protein 961011..962234 Psychrobacter arcticus 273-4 3514651 YP_264091.1 CDS Psyc_0804 NC_007204.1 962616 963443 R This family of bacterial transcriptional regulators includes the acetate operon repressor both of which are members of the iclR family [1, 2]. These proteins have a Helix-Turn-Helix motif at the N-terminus. The C-terminal region may bind to the regulatory; IclR family transcriptional regulator complement(962616..963443) Psychrobacter arcticus 273-4 3514652 YP_264092.1 CDS gcdH NC_007204.1 963619 964803 D glutaryl-CoA dehydrogenase 963619..964803 Psychrobacter arcticus 273-4 3514653 YP_264093.1 CDS Psyc_0806 NC_007204.1 965018 966289 D L-carnitine dehydratase 965018..966289 Psychrobacter arcticus 273-4 3514654 YP_264094.1 CDS Psyc_0807 NC_007204.1 966522 967280 R IclR family transcriptional regulator complement(966522..967280) Psychrobacter arcticus 273-4 3514655 YP_264095.1 CDS Psyc_0808 NC_007204.1 967710 969176 D succinate semialdehyde dehydrogenase 967710..969176 Psychrobacter arcticus 273-4 3514656 YP_264096.1 CDS gabT NC_007204.1 969323 970582 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.940) with cleavage site probability 0.907 at residue 28; 4-aminobutyrate aminotransferase 969323..970582 Psychrobacter arcticus 273-4 3514657 YP_264097.1 CDS Psyc_0810 NC_007204.1 970850 972292 D amino acid transporter 970850..972292 Psychrobacter arcticus 273-4 3514658 YP_264098.1 CDS Psyc_0811 NC_007204.1 972553 973782 R glycosyl transferase family protein complement(972553..973782) Psychrobacter arcticus 273-4 3514659 YP_264099.1 CDS Psyc_0812 NC_007204.1 974138 975106 R RBS found. similarity to hepatitis A virus cellular receptor; hypothetical protein complement(974138..975106) Psychrobacter arcticus 273-4 3514660 YP_264100.1 CDS greA NC_007204.1 975447 975923 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(975447..975923) Psychrobacter arcticus 273-4 3514661 YP_264101.1 CDS carB NC_007204.1 976262 979516 R There is only one set of carbomoyl-phosphate synthase genes in Psychrobacter 273-4; carbamoyl-phosphate synthase large subunit complement(976262..979516) Psychrobacter arcticus 273-4 3514662 YP_264102.1 CDS carA NC_007204.1 979715 980947 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(979715..980947) Psychrobacter arcticus 273-4 3514663 YP_264103.1 CDS Psyc_0816 NC_007204.1 981334 981903 R PAP2 family; membrane-associated phospholipid phosphatase complement(981334..981903) Psychrobacter arcticus 273-4 3514664 YP_264104.1 CDS Psyc_0817 NC_007204.1 982318 982854 D transferase 982318..982854 Psychrobacter arcticus 273-4 3514665 YP_264105.1 CDS Psyc_0818 NC_007204.1 982916 983632 D hypothetical protein 982916..983632 Psychrobacter arcticus 273-4 3514666 YP_264106.1 CDS prfB NC_007204.1 983773 984822 D peptide chain release factor 2 983773..984822 Psychrobacter arcticus 273-4 3514319 YP_264107.1 CDS Psyc_0820 NC_007204.1 984892 985176 D hypothetical protein 984892..985176 Psychrobacter arcticus 273-4 3514320 YP_264108.1 CDS Psyc_0821 NC_007204.1 985662 987371 D Probable AMP-dependent synthetase and ligase; acetyl-CoA synthetase 985662..987371 Psychrobacter arcticus 273-4 3514321 YP_264109.1 CDS Psyc_0822 NC_007204.1 987439 988218 D 3-hydroxyacyl-CoA dehydrogenase 987439..988218 Psychrobacter arcticus 273-4 3514322 YP_264110.1 CDS clpB NC_007204.1 988604 991201 D chaperonin clpA/B 988604..991201 Psychrobacter arcticus 273-4 3514323 YP_264111.1 CDS Psyc_0824 NC_007204.1 991514 991642 D hypothetical protein 991514..991642 Psychrobacter arcticus 273-4 3514324 YP_264112.1 CDS Psyc_0825 NC_007204.1 991614 991931 D hypothetical protein 991614..991931 Psychrobacter arcticus 273-4 3514325 YP_264113.1 CDS Psyc_0826 NC_007204.1 992104 993756 D BCCT family choline/carnitine/betaine transporter 992104..993756 Psychrobacter arcticus 273-4 3514326 YP_264114.1 CDS Psyc_0827 NC_007204.1 993913 994269 R RBS found; hypothetical protein complement(993913..994269) Psychrobacter arcticus 273-4 3514327 YP_264115.1 CDS metK NC_007204.1 994366 995532 R methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(994366..995532) Psychrobacter arcticus 273-4 3514328 YP_264116.1 CDS nth NC_007204.1 996160 996855 R Citation: Tainer JA, Thayer MM, Cunningham RP. 1995. DNA repair proteins. Curr Opin Struct Biol. 5(1):20-6.; DNA-(apurinic or apyrimidinic site) lyase / endonuclease III complement(996160..996855) Psychrobacter arcticus 273-4 3514329 YP_264117.1 CDS Psyc_0830 NC_007204.1 996897 997739 R 4Fe-4S ferredoxin; RnfABCDGE type electron transport complex subunit B complement(996897..997739) Psychrobacter arcticus 273-4 3514330 YP_264118.1 CDS Psyc_0831 NC_007204.1 997970 999046 R MutT anti- mutagenic activity represents only one subgroup within this family.; NUDIX hydrolase complement(997970..999046) Psychrobacter arcticus 273-4 3514331 YP_264119.1 CDS Psyc_0832 NC_007204.1 999127 1000824 R hypothetical protein complement(999127..1000824) Psychrobacter arcticus 273-4 3514332 YP_264120.1 CDS Psyc_0833 NC_007204.1 1000960 1002543 R Whether this protein is functional is unknown, both functions are coded for separately elsewhere in the genome (or2386 and or0752).; bifunctional ribonuclease HI/DNA polymerase III, epsilon subunit complement(1000960..1002543) Psychrobacter arcticus 273-4 3514333 YP_264121.1 CDS Psyc_0834 NC_007204.1 1002958 1003515 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.529 at residue 31; hypothetical protein 1002958..1003515 Psychrobacter arcticus 273-4 3514334 YP_264122.1 CDS Psyc_0835 NC_007204.1 1003620 1003925 D 3 transmembrane helices; hypothetical protein 1003620..1003925 Psychrobacter arcticus 273-4 3514335 YP_264123.1 CDS Psyc_0836 NC_007204.1 1004072 1004575 R hypothetical protein complement(1004072..1004575) Psychrobacter arcticus 273-4 3514336 YP_264124.1 CDS Psyc_0837 NC_007204.1 1004691 1005935 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.950) with cleavage site probability 0.553 at residue 33; hypothetical protein 1004691..1005935 Psychrobacter arcticus 273-4 3514337 YP_264125.1 CDS Psyc_0838 NC_007204.1 1006137 1006550 D class I peptide chain release factor 1006137..1006550 Psychrobacter arcticus 273-4 3514338 YP_264126.1 CDS sotB NC_007204.1 1006765 1007964 R sugar efflux transporter complement(1006765..1007964) Psychrobacter arcticus 273-4 3514339 YP_264127.1 CDS chrR NC_007204.1 1008223 1008915 D Citation: Newman JD, Anthony JR, Donohue TJ. The importance of zinc-binding to the function of Rhodobacter sphaeroides ChrR as an anti-sigma factor. J Mol Biol. 2001 Oct 26;313(3):485-99. PMID: 11676534 [PubMed - indexed for MEDLINE]; anti-sigma factor, ChrR 1008223..1008915 Psychrobacter arcticus 273-4 3514340 YP_264128.1 CDS Psyc_0841 NC_007204.1 1008905 1010041 D monoamine oxidase 1008905..1010041 Psychrobacter arcticus 273-4 3514341 YP_264129.1 CDS Psyc_0842 NC_007204.1 1010532 1011188 D glutathione S-transferase 1010532..1011188 Psychrobacter arcticus 273-4 3514342 YP_264130.1 CDS Psyc_0843 NC_007204.1 1011764 1012444 D hypothetical protein 1011764..1012444 Psychrobacter arcticus 273-4 3514343 YP_264131.1 CDS Psyc_0844 NC_007204.1 1012723 1013457 D hypothetical protein 1012723..1013457 Psychrobacter arcticus 273-4 3514344 YP_264132.1 CDS Psyc_0845 NC_007204.1 1013745 1014755 D hypothetical protein 1013745..1014755 Psychrobacter arcticus 273-4 3514345 YP_264133.1 CDS metE NC_007204.1 1014823 1015860 D catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1014823..1015860 Psychrobacter arcticus 273-4 3514346 YP_264134.1 CDS Psyc_0847 NC_007204.1 1016059 1016574 D flavin reductase 1016059..1016574 Psychrobacter arcticus 273-4 3514347 YP_264135.1 CDS Psyc_0848 NC_007204.1 1016772 1017596 D 8 transmembrane domains found; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.870) with cleavage site probability 0.699 at residue 22; transmembrane protein 1016772..1017596 Psychrobacter arcticus 273-4 3514348 YP_264136.1 CDS Psyc_0849 NC_007204.1 1017662 1018411 R transposase OrfB complement(1017662..1018411) Psychrobacter arcticus 273-4 3514349 YP_264137.1 CDS Psyc_0850 NC_007204.1 1018483 1018749 R IS3 family transposase complement(1018483..1018749) Psychrobacter arcticus 273-4 3514350 YP_264138.1 CDS Psyc_0851 NC_007204.1 1018864 1019277 R thioesterase complement(1018864..1019277) Psychrobacter arcticus 273-4 3514351 YP_264139.1 CDS Psyc_0852 NC_007204.1 1019438 1020337 R also has a SMP-30 domain but has low identity hit from Blast; gluconolactonase complement(1019438..1020337) Psychrobacter arcticus 273-4 3514352 YP_264140.1 CDS Psyc_0853 NC_007204.1 1020389 1021552 R iron-containing alcohol dehydrogenase complement(1020389..1021552) Psychrobacter arcticus 273-4 3514353 YP_264141.1 CDS Psyc_0854 NC_007204.1 1021941 1022993 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.906) with cleavage site probability 0.566 at residue 25; TRAP family periplasmic substrate binding subunit 1021941..1022993 Psychrobacter arcticus 273-4 3514354 YP_264142.1 CDS Psyc_0855 NC_007204.1 1023566 1024564 D catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; 23S rRNA pseudouridine synthase F 1023566..1024564 Psychrobacter arcticus 273-4 3514355 YP_264143.1 CDS Psyc_0856 NC_007204.1 1024632 1024847 R hypothetical protein complement(1024632..1024847) Psychrobacter arcticus 273-4 3514356 YP_264144.1 CDS Psyc_0857 NC_007204.1 1024993 1025271 D peptidyl-prolyl isomerase 1024993..1025271 Psychrobacter arcticus 273-4 3514357 YP_264145.1 CDS pdc NC_007204.1 1025921 1027591 D pyruvate decarboxylase 1025921..1027591 Psychrobacter arcticus 273-4 3514858 YP_264146.1 CDS Psyc_0859 NC_007204.1 1028108 1028854 R weak rbs. Predicted by glimmer and critica.; hypothetical protein complement(1028108..1028854) Psychrobacter arcticus 273-4 3514859 YP_264147.1 CDS Psyc_0860 NC_007204.1 1029827 1030516 D hypothetical protein 1029827..1030516 Psychrobacter arcticus 273-4 3514860 YP_264148.1 CDS Psyc_0861 NC_007204.1 1030628 1030963 D hypothetical protein 1030628..1030963 Psychrobacter arcticus 273-4 3514861 YP_264149.1 CDS Psyc_0862 NC_007204.1 1031025 1031432 D hypothetical protein 1031025..1031432 Psychrobacter arcticus 273-4 3514862 YP_264150.1 CDS Psyc_0863 NC_007204.1 1031429 1032238 R Integrase, catalytic domain; transposase orfAB complement(1031429..1032238) Psychrobacter arcticus 273-4 3514863 YP_264151.1 CDS Psyc_0864 NC_007204.1 1032301 1032612 R Contains a fis type helix turn helix binding motif, which is found in a number of proteins involved in recombination and transcriptional regulation.; IS1329/IS3/IS911 transposase complement(1032301..1032612) Psychrobacter arcticus 273-4 3514864 YP_264152.1 CDS Psyc_0865 NC_007204.1 1032690 1033049 D hypothetical protein 1032690..1033049 Psychrobacter arcticus 273-4 3514865 YP_264153.1 CDS Psyc_0866 NC_007204.1 1033154 1034278 D RBS found. predicted phage-related endonuclease; hypothetical protein 1033154..1034278 Psychrobacter arcticus 273-4 3514866 YP_264154.1 CDS Psyc_0867 NC_007204.1 1034413 1035324 D RBS found.; hypothetical protein 1034413..1035324 Psychrobacter arcticus 273-4 3514867 YP_264155.1 CDS alpA NC_007204.1 1035457 1035738 D found to be upregulated in E.coli during high cell density stress; Citation: Gill RT etal. Genomic analysis of high-cell-density recombinant Escherichia coli fermentation and cell conditioning for improved recombinant protein yield. Biotechnol Bioeng. 2001 Jan 5;72(1):85-95. PMID: 11084598 [PubMed - indexed for MEDLINE]; prophage regulatory protein AlpA 1035457..1035738 Psychrobacter arcticus 273-4 3514868 YP_264156.1 CDS Psyc_0869 NC_007204.1 1036105 1037163 D ATP/GTP-binding site motif A (P-loop):AAA ATPase:AAA ATPase, central region; ATPase AAA 1036105..1037163 Psychrobacter arcticus 273-4 3514869 YP_264157.1 CDS Psyc_0870 NC_007204.1 1037208 1038503 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.673) with cleavage site probability 0.662 at residue 23; hypothetical protein 1037208..1038503 Psychrobacter arcticus 273-4 3514870 YP_264158.1 CDS Psyc_0871 NC_007204.1 1038503 1040275 D hypothetical protein 1038503..1040275 Psychrobacter arcticus 273-4 3514871 YP_264159.1 CDS motB NC_007204.1 1040288 1040923 D OmpA/MotB protein 1040288..1040923 Psychrobacter arcticus 273-4 3514872 YP_264160.1 CDS Psyc_0873 NC_007204.1 1040928 1041116 D hypothetical protein 1040928..1041116 Psychrobacter arcticus 273-4 3514873 YP_264161.1 CDS Psyc_0874 NC_007204.1 1041266 1041745 D similar to Shewanella oneidensis MR-1 hypothetical protein SO2854; hypothetical protein 1041266..1041745 Psychrobacter arcticus 273-4 3514874 YP_264162.1 CDS Psyc_0875 NC_007204.1 1041746 1042309 D hypothetical protein 1041746..1042309 Psychrobacter arcticus 273-4 3514875 YP_264163.1 CDS Psyc_0876 NC_007204.1 1042466 1043458 R hypothetical protein complement(1042466..1043458) Psychrobacter arcticus 273-4 3514876 YP_264164.1 CDS hsdM-1 NC_007204.1 1044227 1045816 D type I restriction-modification system, M subunit 1044227..1045816 Psychrobacter arcticus 273-4 3514877 YP_264165.1 CDS Psyc_0878 NC_007204.1 1045806 1047080 D type I restriction modification system methylase 1045806..1047080 Psychrobacter arcticus 273-4 3514878 YP_264166.1 CDS Psyc_0879 NC_007204.1 1047081 1048073 D death-on-curing family protein 1047081..1048073 Psychrobacter arcticus 273-4 3514879 YP_264167.1 CDS Psyc_0880 NC_007204.1 1048137 1048988 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.984 at residue 23; hypothetical protein 1048137..1048988 Psychrobacter arcticus 273-4 3514880 YP_264168.1 CDS Psyc_0881 NC_007204.1 1049066 1052248 D DEAD/DEAH box helicase:ATP/GTP-binding site motif A (P-loop)::Protein of unknown function DUF450; type I site specific deoxyribonuclease HsdR 1049066..1052248 Psychrobacter arcticus 273-4 3514881 YP_264169.1 CDS yihD NC_007204.1 1052899 1054404 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.852 at residue 20; hypothetical protein 1052899..1054404 Psychrobacter arcticus 273-4 3514882 YP_264170.1 CDS Psyc_0883 NC_007204.1 1054428 1056491 D hypothetical protein 1054428..1056491 Psychrobacter arcticus 273-4 3514883 YP_264171.1 CDS Psyc_0884 NC_007204.1 1056504 1057196 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.986 at residue 22; hypothetical protein 1056504..1057196 Psychrobacter arcticus 273-4 3514884 YP_264172.1 CDS Psyc_0885 NC_007204.1 1057616 1058830 R also adjacent to or470, an integrase; transposase mutator family protein complement(1057616..1058830) Psychrobacter arcticus 273-4 3514885 YP_264173.1 CDS Psyc_0886 NC_007204.1 1058936 1060300 R phage integrase complement(1058936..1060300) Psychrobacter arcticus 273-4 3514886 YP_264174.1 CDS Psyc_0887 NC_007204.1 1060690 1061463 R has these domains: Oxidoreductase FAD/NAD(P)-binding:Flavoprotein pyridine nucleotide cytochrome reductase; NAD(P)/FAD ferrodoxin complement(1060690..1061463) Psychrobacter arcticus 273-4 3514888 YP_264175.1 CDS Psyc_0888 NC_007204.1 1061879 1062721 D hypothetical protein 1061879..1062721 Psychrobacter arcticus 273-4 3514889 YP_264176.1 CDS Psyc_0889 NC_007204.1 1062776 1064563 D type II secretion system protein 1062776..1064563 Psychrobacter arcticus 273-4 3514890 YP_264177.1 CDS tatD NC_007204.1 1064656 1065465 D This family of proteins are related to a large superfamily of metalloenzymes.; Citation: Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T. 2000. TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export. J Biol Chem. 275(22):16717-22.; TatD family Mg-dependent DNase 1064656..1065465 Psychrobacter arcticus 273-4 3514891 YP_264178.1 CDS Psyc_0891 NC_007204.1 1065699 1066382 D TetR family transcriptional regulator 1065699..1066382 Psychrobacter arcticus 273-4 3514892 YP_264179.1 CDS Psyc_0892 NC_007204.1 1066746 1067426 R hypothetical protein complement(1066746..1067426) Psychrobacter arcticus 273-4 3514893 YP_264180.1 CDS dgt NC_007204.1 1067519 1068952 R dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(1067519..1068952) Psychrobacter arcticus 273-4 3515133 YP_264181.1 CDS Psyc_0894 NC_007204.1 1069235 1070326 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(1069235..1070326) Psychrobacter arcticus 273-4 3515134 YP_264182.1 CDS Psyc_0895 NC_007204.1 1070715 1071461 R good rbs. Predicted by generation, glimmer and critica.; hypothetical protein complement(1070715..1071461) Psychrobacter arcticus 273-4 3515135 YP_264183.1 CDS Psyc_0896 NC_007204.1 1071572 1071994 R 3 base rbs. Predicted by generation, glimmer and critica.; hypothetical protein complement(1071572..1071994) Psychrobacter arcticus 273-4 3515136 YP_264184.1 CDS Psyc_0897 NC_007204.1 1072587 1073732 D MFS drug efflux pump 1072587..1073732 Psychrobacter arcticus 273-4 3515137 YP_264185.1 CDS Psyc_0898 NC_007204.1 1073986 1075656 D AMP-dependent synthetase and ligase family protein 1073986..1075656 Psychrobacter arcticus 273-4 3515138 YP_264186.1 CDS prpE NC_007204.1 1075851 1077896 D catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; propionyl-CoA synthetase 1075851..1077896 Psychrobacter arcticus 273-4 3515139 YP_264187.1 CDS mmsA NC_007204.1 1078181 1079665 D methylmalonate-semialdehyde dehydrogenase 1078181..1079665 Psychrobacter arcticus 273-4 3515140 YP_264188.1 CDS Psyc_0901 NC_007204.1 1079865 1081025 D acyl-CoA dehydrogenase 1079865..1081025 Psychrobacter arcticus 273-4 3515141 YP_264189.1 CDS Psyc_0902 NC_007204.1 1081071 1081853 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1081071..1081853 Psychrobacter arcticus 273-4 3515142 YP_264190.1 CDS Psyc_0903 NC_007204.1 1081935 1083176 D enoyl-CoA hydratase 1081935..1083176 Psychrobacter arcticus 273-4 3515143 YP_264191.1 CDS mmsB NC_007204.1 1083288 1084253 D 3-hydroxyisobutyrate dehydrogenase 1083288..1084253 Psychrobacter arcticus 273-4 3515144 YP_264192.1 CDS Psyc_0905 NC_007204.1 1084339 1085097 R IclR family transcriptional regulator complement(1084339..1085097) Psychrobacter arcticus 273-4 3515145 YP_264193.1 CDS Psyc_0906 NC_007204.1 1085743 1086567 D Contains an ATP binding domain; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.998 at residue 22; hypothetical protein 1085743..1086567 Psychrobacter arcticus 273-4 3515146 YP_264194.1 CDS Psyc_0907 NC_007204.1 1086696 1087400 R phosphopantethiene-protein transferase domain-contain protein complement(1086696..1087400) Psychrobacter arcticus 273-4 3515147 YP_264195.1 CDS Psyc_0908 NC_007204.1 1087658 1088176 R OmpA/MotB family outer membrane protein complement(1087658..1088176) Psychrobacter arcticus 273-4 3515148 YP_264196.1 CDS pepN NC_007204.1 1088686 1091334 D Neutral zinc metallopeptidases, zinc-binding region; aminopeptidase 1088686..1091334 Psychrobacter arcticus 273-4 3515149 YP_264197.1 CDS aroF NC_007204.1 1091446 1092528 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1091446..1092528) Psychrobacter arcticus 273-4 3515150 YP_264198.1 CDS lpxB NC_007204.1 1092893 1094194 D lipid-A-disaccharide synthase 1092893..1094194 Psychrobacter arcticus 273-4 3515151 YP_264199.1 CDS Psyc_0912 NC_007204.1 1094240 1095103 D ribonuclease HII 1094240..1095103 Psychrobacter arcticus 273-4 3515152 YP_264200.1 CDS Psyc_0913 NC_007204.1 1095255 1096508 D pyridoxal-dependent decarboxylase 1095255..1096508 Psychrobacter arcticus 273-4 3515153 YP_264201.1 CDS Psyc_0914 NC_007204.1 1096786 1098060 D contains following domains: ATP/GTP-binding site motif A (P-loop):Saccharopine dehydrogenase; saccharopine dehydrogenase family protein 1096786..1098060 Psychrobacter arcticus 273-4 3515154 YP_264202.1 CDS Psyc_0915 NC_007204.1 1098181 1098993 D PhzF family phenazine biosynthesis protein 1098181..1098993 Psychrobacter arcticus 273-4 3515155 YP_264203.1 CDS Psyc_0916 NC_007204.1 1098997 1099329 D predicted integral membrane protein; hypothetical protein 1098997..1099329 Psychrobacter arcticus 273-4 3515156 YP_264204.1 CDS Psyc_0917 NC_007204.1 1099786 1100391 D hypothetical protein 1099786..1100391 Psychrobacter arcticus 273-4 3515157 YP_264205.1 CDS Psyc_0918 NC_007204.1 1100391 1100918 D hypothetical protein 1100391..1100918 Psychrobacter arcticus 273-4 3515158 YP_264206.1 CDS mutL NC_007204.1 1100965 1102716 D The mutL protein binds to mutS, which recognizes and binds to mismatches in DNA duplexes. The mutS-mutL-DNA complex stimulates mutH to cleave the unmethylated DNA strand at the GATC sequence.; Contains following domains: DNA mismatch repair protein:ATP-binding region, ATPase-like.; DNA mismatch repair protein MutL 1100965..1102716 Psychrobacter arcticus 273-4 3515159 YP_264207.1 CDS miaA NC_007204.1 1102782 1104041 D contains full domains: ATP/GTP-binding site motif A (P-loop):tRNA isopentenyltransferase; tRNA delta-2-isopentenylpyrophosphate transferase 1102782..1104041 Psychrobacter arcticus 273-4 3515160 YP_264208.1 CDS Psyc_0921 NC_007204.1 1104622 1105173 D RNA-binding protein Hfq 1104622..1105173 Psychrobacter arcticus 273-4 3515161 YP_264209.1 CDS kpsF NC_007204.1 1105463 1106455 D sugar isomerase 1105463..1106455 Psychrobacter arcticus 273-4 3515162 YP_264210.1 CDS Psyc_0923 NC_007204.1 1106495 1107061 D phosphatase 1106495..1107061 Psychrobacter arcticus 273-4 3515163 YP_264211.1 CDS Psyc_0924 NC_007204.1 1107058 1107642 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.636) with cleavage site probability 0.578 at residue 26; hypothetical protein 1107058..1107642 Psychrobacter arcticus 273-4 3515164 YP_264212.1 CDS Psyc_0925 NC_007204.1 1107718 1108287 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.997) with cleavage site probability 0.959 at residue 41; OstA-like protein 1107718..1108287 Psychrobacter arcticus 273-4 3515165 YP_264213.1 CDS Psyc_0926 NC_007204.1 1108392 1109189 D ABC transporter ATPase 1108392..1109189 Psychrobacter arcticus 273-4 3515166 YP_264214.1 CDS radA NC_007204.1 1109596 1111044 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1109596..1111044 Psychrobacter arcticus 273-4 3515167 YP_264215.1 CDS Psyc_0928 NC_007204.1 1111229 1111849 R lipoprotein complement(1111229..1111849) Psychrobacter arcticus 273-4 3515168 YP_264216.1 CDS rodA NC_007204.1 1112910 1114052 R rod shape determining protein complement(1112910..1114052) Psychrobacter arcticus 273-4 3515169 YP_264217.1 CDS Psyc_0930 NC_007204.1 1114315 1115244 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.991) with cleavage site probability 0.990 at residue 31; hypothetical protein 1114315..1115244 Psychrobacter arcticus 273-4 3515170 YP_264218.1 CDS Psyc_0931 NC_007204.1 1115468 1117054 R insulinase-like peptidase complement(1115468..1117054) Psychrobacter arcticus 273-4 3515171 YP_264219.1 CDS Psyc_0932 NC_007204.1 1117258 1118727 R insulinase-like peptidase complement(1117258..1118727) Psychrobacter arcticus 273-4 3514894 YP_264220.1 CDS Psyc_0933 NC_007204.1 1119138 1120019 D There are 9 addittional ORFs identical to this one.; IS4 family transposase 1119138..1120019 Psychrobacter arcticus 273-4 3514895 YP_264221.1 CDS ftsY NC_007204.1 1120374 1121810 D GTP-binding signal recognition particle (SRP54) G-domain:ATP/GTP-binding site motif A (P-loop):AAA ATPase; signal recognition particle-docking protein FtsY 1120374..1121810 Psychrobacter arcticus 273-4 3514896 YP_264222.1 CDS Psyc_0935 NC_007204.1 1121876 1122448 D methylated-DNA--protein-cysteine methyltransferase 1121876..1122448 Psychrobacter arcticus 273-4 3514897 YP_264223.1 CDS Psyc_0936 NC_007204.1 1122572 1122952 D transposase orfA 1122572..1122952 Psychrobacter arcticus 273-4 3514898 YP_264224.1 CDS Psyc_0937 NC_007204.1 1123087 1123791 D transposase OrfB 1123087..1123791 Psychrobacter arcticus 273-4 3514899 YP_264225.1 CDS Psyc_0938 NC_007204.1 1123872 1124621 R Protein of unknown function DUF28 Hits to yebC of E.coli but that is called a conserved hypothetical too; hypothetical protein complement(1123872..1124621) Psychrobacter arcticus 273-4 3514900 YP_264226.1 CDS Psyc_0939 NC_007204.1 1124978 1125808 D VIC family potassium channel protein 1124978..1125808 Psychrobacter arcticus 273-4 3514901 YP_264227.1 CDS Psyc_0940 NC_007204.1 1125868 1127169 R ABC1 binding domain; from interpro: E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins.; hypothetical protein complement(1125868..1127169) Psychrobacter arcticus 273-4 3514902 YP_264228.1 CDS aroQ NC_007204.1 1127348 1127884 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(1127348..1127884) Psychrobacter arcticus 273-4 3514903 YP_264229.1 CDS capB NC_007204.1 1128371 1128586 D contains the cold shock DNA-binding domain 79% homology to capB; Citation: Michel V, Lehoux I, Depret G, Anglade P, Labadie J, Hebraud M. The cold shock response of the psychrotrophic bacterium Pseudomonas fragi involves four low-molecular-mass nucleic acid-binding proteins. J Bacteriol. 1997 Dec;179(23):7331-42. PMID: 93; cold-shock DNA-binding protein family protein 1128371..1128586 Psychrobacter arcticus 273-4 3514904 YP_264230.1 CDS rhlB NC_007204.1 1128808 1129998 D ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop); ATP-dependent RNA helicase 1128808..1129998 Psychrobacter arcticus 273-4 3514905 YP_264231.1 CDS Psyc_0944 NC_007204.1 1130049 1130930 R There are 10 repeats of this sequence; IS4 family transposase complement(1130049..1130930) Psychrobacter arcticus 273-4 3514906 YP_264232.1 CDS Psyc_0945 NC_007204.1 1131278 1132096 R hypothetical protein complement(1131278..1132096) Psychrobacter arcticus 273-4 3514907 YP_264233.1 CDS Psyc_0946 NC_007204.1 1132194 1132496 R hypothetical protein complement(1132194..1132496) Psychrobacter arcticus 273-4 3514908 YP_264234.1 CDS Psyc_0947 NC_007204.1 1132623 1133420 R Protein of unknown function DUF218 domain; hypothetical protein complement(1132623..1133420) Psychrobacter arcticus 273-4 3514909 YP_264235.1 CDS murB NC_007204.1 1133386 1134507 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1133386..1134507) Psychrobacter arcticus 273-4 3514910 YP_264236.1 CDS Psyc_0949 NC_007204.1 1134613 1135107 R low molecular weight phosphotyrosine protein phosphatase complement(1134613..1135107) Psychrobacter arcticus 273-4 3514911 YP_264237.1 CDS Psyc_0950 NC_007204.1 1135339 1135779 R S4 paralog; heat shock RNA-binding protein complement(1135339..1135779) Psychrobacter arcticus 273-4 3514912 YP_264238.1 CDS ilvA NC_007204.1 1136091 1137644 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(1136091..1137644) Psychrobacter arcticus 273-4 3514358 YP_264239.1 CDS Psyc_0952 NC_007204.1 1137936 1138310 D ArsR family transcriptional regulator 1137936..1138310 Psychrobacter arcticus 273-4 3514359 YP_264240.1 CDS Psyc_0953 NC_007204.1 1138370 1138780 D arsenate reductase 1138370..1138780 Psychrobacter arcticus 273-4 3514360 YP_264241.1 CDS arsH NC_007204.1 1138764 1139555 D NADPH-dependent FMN reductase 1138764..1139555 Psychrobacter arcticus 273-4 3514361 YP_264242.1 CDS arsB NC_007204.1 1139785 1141089 D arsenite-antimonite efflux pump ArsB 1139785..1141089 Psychrobacter arcticus 273-4 3514362 YP_264243.1 CDS rpiA NC_007204.1 1141236 1141895 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1141236..1141895 Psychrobacter arcticus 273-4 3514363 YP_264244.1 CDS argF NC_007204.1 1142154 1143077 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(1142154..1143077) Psychrobacter arcticus 273-4 3514364 YP_264245.1 CDS alr NC_007204.1 1143289 1144395 R inding-protein-dependent transport systems inner membrane component:; alanine racemase complement(1143289..1144395) Psychrobacter arcticus 273-4 3514365 YP_264246.1 CDS dnaB NC_007204.1 1144536 1145939 R The N-terminal domain is required both for interaction with other proteins in the primosome and for DnaB helicase activity. The C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.; primary replicative DNA helicase complement(1144536..1145939) Psychrobacter arcticus 273-4 3514366 YP_264247.1 CDS pdxA NC_007204.1 1146400 1147497 D pyridoxal phosphate biosynthetic protein 1146400..1147497 Psychrobacter arcticus 273-4 3514367 YP_264248.1 CDS ksgA NC_007204.1 1147667 1148530 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1147667..1148530 Psychrobacter arcticus 273-4 3514368 YP_264249.1 CDS apaH NC_007204.1 1148674 1149516 D hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 1148674..1149516 Psychrobacter arcticus 273-4 3514369 YP_264250.1 CDS Psyc_0963 NC_007204.1 1149562 1152042 R site-specific recombinase complement(1149562..1152042) Psychrobacter arcticus 273-4 3514370 YP_264251.1 CDS Psyc_0964 NC_007204.1 1152380 1154164 R one sugar transporter domain likely involved in binding since membrane transporter proteins have 12 of these domains; acyl-CoA dehydrogenase complement(1152380..1154164) Psychrobacter arcticus 273-4 3514371 YP_264252.1 CDS Psyc_0965 NC_007204.1 1154635 1156428 R contains central domain and c- terminus addtional sequences as seen is Acientobacter; acyl-CoA dehydrogenase complement(1154635..1156428) Psychrobacter arcticus 273-4 3514372 YP_264253.1 CDS Psyc_0966 NC_007204.1 1157154 1158038 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(1157154..1158038) Psychrobacter arcticus 273-4 3514373 YP_264254.1 CDS metF NC_007204.1 1158310 1159155 R Conversion of 5, 10 methylenetetrahydrofolate to 5-methyltetrahydrofolate is a prerequisite for donation of that methyl group to homocysteine -> methionine.; methylenetetrahydrofolate reductase complement(1158310..1159155) Psychrobacter arcticus 273-4 3514374 YP_264255.1 CDS ahcY NC_007204.1 1159169 1160593 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(1159169..1160593) Psychrobacter arcticus 273-4 3514375 YP_264256.1 CDS btuB NC_007204.1 1160914 1162851 R TonB dependent transporter; outer membrane receptor for transport of vitamin B complement(1160914..1162851) Psychrobacter arcticus 273-4 3514376 YP_264257.1 CDS Psyc_0970 NC_007204.1 1163157 1165109 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.989 at residue 50; small-conductance mechanosensitive ion channel 1163157..1165109 Psychrobacter arcticus 273-4 3514377 YP_264258.1 CDS Psyc_0971 NC_007204.1 1165307 1166038 R Contains a C-terminal MutS2 domain. Does not contain required N-terminal domain.; hypothetical protein complement(1165307..1166038) Psychrobacter arcticus 273-4 3514913 YP_264259.1 CDS trpC NC_007204.1 1166151 1167038 R involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase complement(1166151..1167038) Psychrobacter arcticus 273-4 3514914 YP_264260.1 CDS trpD NC_007204.1 1167326 1168465 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(1167326..1168465) Psychrobacter arcticus 273-4 3514915 YP_264261.1 CDS trpG NC_007204.1 1168511 1169134 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(1168511..1169134) Psychrobacter arcticus 273-4 3514916 YP_264262.1 CDS glnA NC_007204.1 1169917 1171326 D Contains adenylation site; L-glutamine synthetase 1169917..1171326 Psychrobacter arcticus 273-4 3514917 YP_264263.1 CDS Psyc_0976 NC_007204.1 1171657 1172475 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.998 at residue 37; hypothetical protein 1171657..1172475 Psychrobacter arcticus 273-4 3514918 YP_264264.1 CDS Psyc_0977 NC_007204.1 1172655 1173371 R RBS found. Contains predicted signal peptidase target sequence. Contains DUF541 domain.; hypothetical protein complement(1172655..1173371) Psychrobacter arcticus 273-4 3514919 YP_264265.1 CDS Psyc_0978 NC_007204.1 1174208 1174477 R hypothetical protein complement(1174208..1174477) Psychrobacter arcticus 273-4 3514921 YP_264266.1 CDS Psyc_0979 NC_007204.1 1174464 1175015 R hypothetical protein complement(1174464..1175015) Psychrobacter arcticus 273-4 3514922 YP_264267.1 CDS Psyc_0980 NC_007204.1 1175124 1176590 R This gene also had significant hits to phage methylases.; C-5 cytosine-specific DNA methylase complement(1175124..1176590) Psychrobacter arcticus 273-4 3514923 YP_264268.1 CDS Psyc_0981 NC_007204.1 1176639 1177685 R RBS found.; hypothetical protein complement(1176639..1177685) Psychrobacter arcticus 273-4 3514924 YP_264269.1 CDS Psyc_0982 NC_007204.1 1177957 1178973 R hypothetical protein complement(1177957..1178973) Psychrobacter arcticus 273-4 3514925 YP_264270.1 CDS Psyc_0983 NC_007204.1 1178976 1179266 R good rbs. Predicted by glimmer only. 22base pair cleavage site; hypothetical protein complement(1178976..1179266) Psychrobacter arcticus 273-4 3514926 YP_264271.1 CDS Psyc_0984 NC_007204.1 1179272 1179640 R good rbs. Predicted by generation, glimmer and critica.; hypothetical protein complement(1179272..1179640) Psychrobacter arcticus 273-4 3514927 YP_264272.1 CDS Psyc_0985 NC_007204.1 1180570 1180917 D DNA binding protein 1180570..1180917 Psychrobacter arcticus 273-4 3514928 YP_264273.1 CDS Psyc_0986 NC_007204.1 1180939 1181484 D Contains a metallopeptidase zinc binding site.; neutral zinc metallopeptidase 1180939..1181484 Psychrobacter arcticus 273-4 3514929 YP_264274.1 CDS Psyc_0987 NC_007204.1 1181960 1182868 R Predicted by glimmer only. Good rbs; hypothetical protein complement(1181960..1182868) Psychrobacter arcticus 273-4 3514930 YP_264275.1 CDS Psyc_0988 NC_007204.1 1182865 1183734 R good rbs. Predicted by glimmer and critica.; hypothetical protein complement(1182865..1183734) Psychrobacter arcticus 273-4 3514987 YP_264276.1 CDS Psyc_0989 NC_007204.1 1184381 1185100 R LexA family, clan SF; S24 family peptidase complement(1184381..1185100) Psychrobacter arcticus 273-4 3514988 YP_264277.1 CDS Psyc_0990 NC_007204.1 1185207 1185449 D hypothetical protein 1185207..1185449 Psychrobacter arcticus 273-4 3514989 YP_264278.1 CDS Psyc_0991 NC_007204.1 1185452 1185841 D hypothetical protein 1185452..1185841 Psychrobacter arcticus 273-4 3514990 YP_264279.1 CDS Psyc_0992 NC_007204.1 1186219 1187163 D hypothetical protein 1186219..1187163 Psychrobacter arcticus 273-4 3514991 YP_264280.1 CDS Psyc_0993 NC_007204.1 1187192 1187710 D hypothetical protein 1187192..1187710 Psychrobacter arcticus 273-4 3514992 YP_264281.1 CDS Psyc_0994 NC_007204.1 1187937 1188281 D strong ribosomal binding site, predicted by glimmer and critica; hypothetical protein 1187937..1188281 Psychrobacter arcticus 273-4 3514993 YP_264282.1 CDS Psyc_0995 NC_007204.1 1188334 1188903 D hypothetical protein 1188334..1188903 Psychrobacter arcticus 273-4 3514994 YP_264283.1 CDS Psyc_0996 NC_007204.1 1188974 1189789 D hypothetical protein 1188974..1189789 Psychrobacter arcticus 273-4 3514995 YP_264284.1 CDS Psyc_0997 NC_007204.1 1189792 1190223 D hypothetical protein 1189792..1190223 Psychrobacter arcticus 273-4 3514996 YP_264285.1 CDS Psyc_0998 NC_007204.1 1191327 1191887 R Phage related; hypothetical protein complement(1191327..1191887) Psychrobacter arcticus 273-4 3514998 YP_264286.1 CDS Psyc_0999 NC_007204.1 1191891 1192469 D transposase 1191891..1192469 Psychrobacter arcticus 273-4 3514999 YP_264287.1 CDS Psyc_1000 NC_007204.1 1192502 1192975 D phage protein 1192502..1192975 Psychrobacter arcticus 273-4 3515000 YP_264288.1 CDS Psyc_1001 NC_007204.1 1192956 1194221 D PBSX family phage terminase large subunit 1192956..1194221 Psychrobacter arcticus 273-4 3515001 YP_264289.1 CDS Psyc_1002 NC_007204.1 1194218 1195735 D Mu-like prophage protein 1194218..1195735 Psychrobacter arcticus 273-4 3515002 YP_264290.1 CDS Psyc_1003 NC_007204.1 1195738 1196535 D phagehead morphogenesis protein, SPP1 gp7 1195738..1196535 Psychrobacter arcticus 273-4 3515003 YP_264291.1 CDS Psyc_1004 NC_007204.1 1197089 1198297 D serine peptidase 1197089..1198297 Psychrobacter arcticus 273-4 3515004 YP_264292.1 CDS Psyc_1005 NC_007204.1 1198297 1198674 D hypothetical protein 1198297..1198674 Psychrobacter arcticus 273-4 3515005 YP_264293.1 CDS Psyc_1006 NC_007204.1 1198686 1199780 D hypothetical protein 1198686..1199780 Psychrobacter arcticus 273-4 3515006 YP_264294.1 CDS Psyc_1007 NC_007204.1 1199836 1200120 D hypothetical protein 1199836..1200120 Psychrobacter arcticus 273-4 3515007 YP_264295.1 CDS Psyc_1008 NC_007204.1 1200124 1200561 D prophage protein gp36 1200124..1200561 Psychrobacter arcticus 273-4 3515008 YP_264296.1 CDS Psyc_1009 NC_007204.1 1200578 1200994 D bacteriophage ( tail completion) protein 1200578..1200994 Psychrobacter arcticus 273-4 3515009 YP_264297.1 CDS Psyc_1010 NC_007204.1 1200991 1201416 D hypothetical protein 1200991..1201416 Psychrobacter arcticus 273-4 3515010 YP_264298.1 CDS Psyc_1011 NC_007204.1 1201429 1202175 D hypothetical protein 1201429..1202175 Psychrobacter arcticus 273-4 3515011 YP_264299.1 CDS Psyc_1012 NC_007204.1 1202316 1202651 D hypothetical protein 1202316..1202651 Psychrobacter arcticus 273-4 3515012 YP_264300.1 CDS Psyc_1013 NC_007204.1 1202648 1203022 D hypothetical protein 1202648..1203022 Psychrobacter arcticus 273-4 3515013 YP_264301.1 CDS Psyc_1014 NC_007204.1 1203019 1204227 D hypothetical protein 1203019..1204227 Psychrobacter arcticus 273-4 3515014 YP_264302.1 CDS Psyc_1015 NC_007204.1 1204229 1204480 D hypothetical protein 1204229..1204480 Psychrobacter arcticus 273-4 3515015 YP_264303.1 CDS Psyc_1016 NC_007204.1 1204483 1204875 D hypothetical protein 1204483..1204875 Psychrobacter arcticus 273-4 3515016 YP_264304.1 CDS Psyc_1017 NC_007204.1 1204939 1205370 D hypothetical protein 1204939..1205370 Psychrobacter arcticus 273-4 3515017 YP_264305.1 CDS Psyc_1018 NC_007204.1 1206017 1209571 D hypothetical protein 1206017..1209571 Psychrobacter arcticus 273-4 3515018 YP_264306.1 CDS Psyc_1019 NC_007204.1 1209575 1210843 D hypothetical protein 1209575..1210843 Psychrobacter arcticus 273-4 3515019 YP_264307.1 CDS Psyc_1020 NC_007204.1 1210848 1211219 D hypothetical protein 1210848..1211219 Psychrobacter arcticus 273-4 3515020 YP_264308.1 CDS Psyc_1021 NC_007204.1 1211216 1211560 D hypothetical protein 1211216..1211560 Psychrobacter arcticus 273-4 3515021 YP_264309.1 CDS Psyc_1022 NC_007204.1 1211570 1213483 D hypothetical protein 1211570..1213483 Psychrobacter arcticus 273-4 3515022 YP_264310.1 CDS Psyc_1023 NC_007204.1 1213486 1213716 D hypothetical protein 1213486..1213716 Psychrobacter arcticus 273-4 3515023 YP_264311.1 CDS Psyc_1024 NC_007204.1 1213713 1214147 D hypothetical protein 1213713..1214147 Psychrobacter arcticus 273-4 3515024 YP_264312.1 CDS Psyc_1025 NC_007204.1 1214150 1214284 D hypothetical protein 1214150..1214284 Psychrobacter arcticus 273-4 3515025 YP_264313.1 CDS Psyc_1026 NC_007204.1 1214344 1214946 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.995) with cleavage site probability 0.614 at residue 27; hypothetical protein 1214344..1214946 Psychrobacter arcticus 273-4 3515026 YP_264314.1 CDS Psyc_1027 NC_007204.1 1215071 1215439 R Predicted by generation, glimmer and critica. 3 base rbs; hypothetical protein complement(1215071..1215439) Psychrobacter arcticus 273-4 3515027 YP_264315.1 CDS Psyc_1028 NC_007204.1 1215620 1216393 D hypothetical protein 1215620..1216393 Psychrobacter arcticus 273-4 3515028 YP_264316.1 CDS Psyc_1029 NC_007204.1 1216469 1216780 D hypothetical protein 1216469..1216780 Psychrobacter arcticus 273-4 3515029 YP_264317.1 CDS Psyc_1030 NC_007204.1 1216850 1220698 D bacteriophage tail tape meausure protein 1216850..1220698 Psychrobacter arcticus 273-4 3515030 YP_264318.1 CDS Psyc_1031 NC_007204.1 1220746 1221138 D hypothetical protein 1220746..1221138 Psychrobacter arcticus 273-4 3515031 YP_264319.1 CDS Psyc_1032 NC_007204.1 1221190 1221807 D bacteriophage lysozyme 1221190..1221807 Psychrobacter arcticus 273-4 3515032 YP_264320.1 CDS Psyc_1033 NC_007204.1 1221804 1222274 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.838) with cleavage site probability 0.795 at residue 31; hypothetical protein 1221804..1222274 Psychrobacter arcticus 273-4 3515033 YP_264321.1 CDS Psyc_1034 NC_007204.1 1222376 1223710 R phage integrase complement(1222376..1223710) Psychrobacter arcticus 273-4 3515034 YP_264322.1 CDS Psyc_1035 NC_007204.1 1224328 1225233 D hypothetical protein 1224328..1225233 Psychrobacter arcticus 273-4 3515035 YP_264323.1 CDS serC NC_007204.1 1225386 1226507 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1225386..1226507 Psychrobacter arcticus 273-4 3515036 YP_264324.1 CDS Psyc_1037 NC_007204.1 1226757 1228589 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.861 at residue 25; peptide ABC transporter periplasmic solute-binding protein 1226757..1228589 Psychrobacter arcticus 273-4 3515037 YP_264325.1 CDS Psyc_1038 NC_007204.1 1228674 1229453 D hydroxyacylglutathione hydrolase 1228674..1229453 Psychrobacter arcticus 273-4 3515038 YP_264326.1 CDS Psyc_1039 NC_007204.1 1229532 1230599 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.977 at residue 30; peptide ABC transporter inner membrane protein 1229532..1230599 Psychrobacter arcticus 273-4 3515039 YP_264327.1 CDS Psyc_1040 NC_007204.1 1230599 1231681 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.796 at residue 63; peptide ABC transporter inner membrane protein 1230599..1231681 Psychrobacter arcticus 273-4 3515040 YP_264328.1 CDS Psyc_1041 NC_007204.1 1231683 1233380 D peptide ABC transporter ATPase 1231683..1233380 Psychrobacter arcticus 273-4 3515041 YP_264329.1 CDS Psyc_1042 NC_007204.1 1233479 1234804 D iron-containing alcohol dehydrogenase 1233479..1234804 Psychrobacter arcticus 273-4 3515042 YP_264330.1 CDS Psyc_1043 NC_007204.1 1234922 1236172 D this fusion consists of methionine sulfoxide A reductase at the N-terminus and B at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion; bifunctional methionine sulfoxide reductase A/B 1234922..1236172 Psychrobacter arcticus 273-4 3515043 YP_264331.1 CDS folE2 NC_007204.1 1236323 1236934 R GTP cyclohydrolase complement(1236323..1236934) Psychrobacter arcticus 273-4 3515044 YP_264332.1 CDS fabI NC_007204.1 1237282 1238088 D Glucose/ribitol dehydrogenase contains this domain for substrate; enoyl-ACP reductase 1237282..1238088 Psychrobacter arcticus 273-4 3514931 YP_264333.1 CDS Psyc_1046 NC_007204.1 1238200 1238895 D 48 base signalP site at N-terminus, 6 predicted transmembrane spannning helices; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.972) with cleavage site probability 0.560 at residue 26; transmembrane protein 1238200..1238895 Psychrobacter arcticus 273-4 3514932 YP_264334.1 CDS Psyc_1047 NC_007204.1 1238984 1239145 R 4 base rbs. Predicted by generation, glimmer and critica.; hypothetical protein complement(1238984..1239145) Psychrobacter arcticus 273-4 3514933 YP_264335.1 CDS Psyc_1048 NC_007204.1 1239514 1240935 D DASS family divalent anion:Na(+) symporter 1239514..1240935 Psychrobacter arcticus 273-4 3514934 YP_264336.1 CDS hrpA NC_007204.1 1241380 1245651 D DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):AAA ATPase:Helicase-associated region; ATP dependent DNA/RNA helicase 1241380..1245651 Psychrobacter arcticus 273-4 3514935 YP_264337.1 CDS Psyc_1051 NC_007204.1 1246757 1247521 R DMT superfamily efflux pump complement(1246757..1247521) Psychrobacter arcticus 273-4 3514937 YP_264338.1 CDS Psyc_1052 NC_007204.1 1248096 1249241 D catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1248096..1249241 Psychrobacter arcticus 273-4 3514938 YP_264339.1 CDS prfA NC_007204.1 1249626 1250714 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1249626..1250714 Psychrobacter arcticus 273-4 3514939 YP_264340.1 CDS lysS NC_007204.1 1250966 1252510 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1250966..1252510 Psychrobacter arcticus 273-4 3514940 YP_264341.1 CDS dnaX NC_007204.1 1252737 1254632 D If the gene is translated completely then the tau subunit is synthesized. If translation slips or frameshifts part way through the reading frame then a stop codon is encountered, and the gamma subunit is synthesized.; DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit 1252737..1254632 Psychrobacter arcticus 273-4 3514941 YP_264342.1 CDS Psyc_1056 NC_007204.1 1254867 1255766 D contains N' terminal HTH motif and the LysR substrate binding domain but doesn't match closely any of the known family members; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.757) with cleavage site probability 0.523 at residue 25; LysR family transcriptional regulator 1254867..1255766 Psychrobacter arcticus 273-4 3514942 YP_264343.1 CDS argD NC_007204.1 1255921 1257102 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(1255921..1257102) Psychrobacter arcticus 273-4 3514943 YP_264344.1 CDS Psyc_1058 NC_007204.1 1257166 1257363 R hypothetical protein complement(1257166..1257363) Psychrobacter arcticus 273-4 3514944 YP_264345.1 CDS Psyc_1059 NC_007204.1 1257567 1258232 D contains hit to SAM (and some other nucleotide) binding motif over 22% of gene; methyltransferase 1257567..1258232 Psychrobacter arcticus 273-4 3514945 YP_264346.1 CDS Psyc_1060 NC_007204.1 1258396 1259883 R Citation: Interpro: This family includes ABC1 from yeast [MEDLINE:91293073] and AarF from E. coli [MEDLINE:98083065].; ABC transporter complement(1258396..1259883) Psychrobacter arcticus 273-4 3514946 YP_264347.1 CDS purD NC_007204.1 1260297 1261625 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(1260297..1261625) Psychrobacter arcticus 273-4 3514947 YP_264348.1 CDS gdhA2 NC_007204.1 1262062 1266921 D Contains a strong alignment Pfam bacterial NAD glutamate dehydrogenase from Streptomyces clavuligerus; glutamate dehydrogenase 1262062..1266921 Psychrobacter arcticus 273-4 3514948 YP_264349.1 CDS sbcC NC_007204.1 1267100 1271023 R The C subunit contains the ATPase activity of the complex.; exonuclease SbcD complement(1267100..1271023) Psychrobacter arcticus 273-4 3514949 YP_264350.1 CDS sbcD NC_007204.1 1271096 1272682 R exodeoxyribonuclease I complement(1271096..1272682) Psychrobacter arcticus 273-4 3514950 YP_264351.1 CDS cysG NC_007204.1 1272786 1274450 R uroporphyrinogen-III C-methyltransferase complement(1272786..1274450) Psychrobacter arcticus 273-4 3514951 YP_264352.1 CDS Psyc_1066 NC_007204.1 1274676 1275314 R phosphoadenylylsulfate reductase complement(1274676..1275314) Psychrobacter arcticus 273-4 3514952 YP_264353.1 CDS Psyc_1067 NC_007204.1 1275365 1275961 R Aligns to COG3749: Uncharacterized bacterial protein.; hypothetical protein complement(1275365..1275961) Psychrobacter arcticus 273-4 3514953 YP_264354.1 CDS cysI NC_007204.1 1275954 1277639 R sulfite reductase subunit beta complement(1275954..1277639) Psychrobacter arcticus 273-4 3514954 YP_264355.1 CDS sat NC_007204.1 1278111 1279370 D ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; sulfate adenylyltransferase 1278111..1279370 Psychrobacter arcticus 273-4 3514955 YP_264356.1 CDS Psyc_1070 NC_007204.1 1279739 1280923 D ABC sulfate/thiosulfate transporter periplasmic solute-binding protein 1279739..1280923 Psychrobacter arcticus 273-4 3514956 YP_264357.1 CDS Psyc_1071 NC_007204.1 1281205 1282302 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.881) with cleavage site probability 0.411 at residue 34; ABC sulfate/thiosulfate transporter periplasmic solute-binding protein 1281205..1282302 Psychrobacter arcticus 273-4 3514957 YP_264358.1 CDS cysT NC_007204.1 1282559 1283443 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.882) with cleavage site probability 0.663 at residue 56; ABC sulfate/thiosulfate transporter inner membrane protein CysT 1282559..1283443 Psychrobacter arcticus 273-4 3514958 YP_264359.1 CDS cysW NC_007204.1 1283443 1284375 D ABC sulfate/thiosulfate transporter inner membrane protein CysW 1283443..1284375 Psychrobacter arcticus 273-4 3514959 YP_264360.1 CDS cysA NC_007204.1 1284382 1285191 D ABC sulfate/thiosulfate transporter ATPase subunit CysA 1284382..1285191 Psychrobacter arcticus 273-4 3514960 YP_264361.1 CDS arsR NC_007204.1 1285357 1285680 R helix turn helix domain supports regulatory role; Citation: Bairoch A. Nuclic Acids Res. 21: 2515- 2515 (1993) [PubMed: 8506147 ] J Biol Chem. 1996 Feb 2;271(5):2427-32.; ArsR family transcriptional regulator complement(1285357..1285680) Psychrobacter arcticus 273-4 3514961 YP_264362.1 CDS Psyc_1076 NC_007204.1 1285905 1286159 D bacterioferritin-associated ferredoxin 1285905..1286159 Psychrobacter arcticus 273-4 3514962 YP_264363.1 CDS bfrA NC_007204.1 1286244 1286732 D ferritin 1286244..1286732 Psychrobacter arcticus 273-4 3514963 YP_264364.1 CDS bfr NC_007204.1 1286804 1287277 D ferritin 1286804..1287277 Psychrobacter arcticus 273-4 3514964 YP_264365.1 CDS Psyc_1079 NC_007204.1 1287431 1288807 R major facilitator superfamily multi-drug efflux pump complement(1287431..1288807) Psychrobacter arcticus 273-4 3514965 YP_264366.1 CDS Psyc_1080 NC_007204.1 1289068 1289910 D YghU; B2989; one of eight glutathione transferases from E. coli; glutathione S-transferase 1289068..1289910 Psychrobacter arcticus 273-4 3514966 YP_264367.1 CDS Psyc_1081 NC_007204.1 1290288 1291502 D 65bp signalP site at n-terminus; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.998 at residue 65; hypothetical protein 1290288..1291502 Psychrobacter arcticus 273-4 3514967 YP_264368.1 CDS Psyc_1082 NC_007204.1 1292149 1293852 D ATP-dependent DEAD/DEAH box RNA-helicase 1292149..1293852 Psychrobacter arcticus 273-4 3514968 YP_264369.1 CDS Psyc_1083 NC_007204.1 1294131 1295375 D 12 transmembrane helices, Aligns with DUF819 domain HMM, RBS found; hypothetical protein 1294131..1295375 Psychrobacter arcticus 273-4 3514969 YP_264370.1 CDS Psyc_1084 NC_007204.1 1295387 1296799 R RBS found. Contains GntR family helix-turn-helix domain.; GntR family transcriptional regulator complement(1295387..1296799) Psychrobacter arcticus 273-4 3514970 YP_264371.1 CDS Psyc_1085 NC_007204.1 1297085 1298023 D 10 transmembrane helices, SignalP site; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.950) with cleavage site probability 0.945 at residue 27; DMT superfamliy efflux pump 1297085..1298023 Psychrobacter arcticus 273-4 3514971 YP_264372.1 CDS Psyc_1087 NC_007204.1 1299098 1299523 D DNA-binding protein 1299098..1299523 Psychrobacter arcticus 273-4 3514973 YP_264373.1 CDS Psyc_1088 NC_007204.1 1299592 1299813 D RBS identified; hypothetical protein 1299592..1299813 Psychrobacter arcticus 273-4 3514974 YP_264374.1 CDS Psyc_1089 NC_007204.1 1299911 1300666 D hypothetical protein 1299911..1300666 Psychrobacter arcticus 273-4 3514975 YP_264375.1 CDS Psyc_1090 NC_007204.1 1300792 1301466 R weak rbs. 37 bp cleavage site predicted. Predicted by generation, glimmer and critica.; hypothetical protein complement(1300792..1301466) Psychrobacter arcticus 273-4 3514976 YP_264376.1 CDS Psyc_1091 NC_007204.1 1301699 1302172 D SignalP detects a signal peptidase target sequence in the N-terminus. Good RBS found.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.996) with cleavage site probability 0.710 at residue 23; hypothetical protein 1301699..1302172 Psychrobacter arcticus 273-4 3514977 YP_264377.1 CDS Psyc_1092 NC_007204.1 1302357 1303616 R contains 11 predicted trans-membrane helices; hypothetical protein complement(1302357..1303616) Psychrobacter arcticus 273-4 3514978 YP_264378.1 CDS Psyc_1093 NC_007204.1 1304081 1305208 R NADH-dependent flavin oxidoreductase complement(1304081..1305208) Psychrobacter arcticus 273-4 3514979 YP_264379.1 CDS Psyc_1094 NC_007204.1 1305370 1306284 D has fis type and LysR helix turn helix motifs with LysR substrate domain; LysR family transcriptional regulator 1305370..1306284 Psychrobacter arcticus 273-4 3514980 YP_264380.1 CDS Psyc_1095 NC_007204.1 1306680 1307804 D Fic family protein 1306680..1307804 Psychrobacter arcticus 273-4 3514981 YP_264381.1 CDS Psyc_1096 NC_007204.1 1308064 1308486 R biotin carboxyl carrier protein complement(1308064..1308486) Psychrobacter arcticus 273-4 3514982 YP_264382.1 CDS Psyc_1097 NC_007204.1 1308510 1309697 R metal Ion (Mn2+/Fe2+) transporter NRAMP family complement(1308510..1309697) Psychrobacter arcticus 273-4 3514983 YP_264383.1 CDS Psyc_1098 NC_007204.1 1309721 1310482 R LamB/YcsF family protein complement(1309721..1310482) Psychrobacter arcticus 273-4 3514984 YP_264384.1 CDS Psyc_1099 NC_007204.1 1310472 1311395 R allophanate hydrolase subunit 2 complement(1310472..1311395) Psychrobacter arcticus 273-4 3514985 YP_264385.1 CDS Psyc_1100 NC_007204.1 1311448 1312101 R allophanate hydrolase subunit 1 complement(1311448..1312101) Psychrobacter arcticus 273-4 3514986 YP_264386.1 CDS Psyc_1101 NC_007204.1 1312190 1313536 R acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase complement(1312190..1313536) Psychrobacter arcticus 273-4 3514799 YP_264387.1 CDS Psyc_1102 NC_007204.1 1313595 1314107 R biotin carboxyl carrier protein complement(1313595..1314107) Psychrobacter arcticus 273-4 3514800 YP_264388.1 CDS Psyc_1103 NC_007204.1 1314354 1315145 R RBS found.; hypothetical protein complement(1314354..1315145) Psychrobacter arcticus 273-4 3514801 YP_264389.1 CDS Psyc_1104 NC_007204.1 1315404 1315766 D RBS found.; hypothetical protein 1315404..1315766 Psychrobacter arcticus 273-4 3514802 YP_264390.1 CDS Psyc_1105 NC_007204.1 1316126 1317088 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.869) with cleavage site probability 0.721 at residue 37; acyltransferase 1316126..1317088 Psychrobacter arcticus 273-4 3514803 YP_264391.1 CDS Psyc_1106 NC_007204.1 1317250 1317633 D hypothetical protein 1317250..1317633 Psychrobacter arcticus 273-4 3514804 YP_264392.1 CDS Psyc_1107 NC_007204.1 1317636 1318601 R Predicted by generation, glimmer and critica. good rbs. 1 transmembrane helix; hypothetical protein complement(1317636..1318601) Psychrobacter arcticus 273-4 3514805 YP_264393.1 CDS Psyc_1108 NC_007204.1 1318828 1319841 D LysR substrate binding domain and LysR helix- turn- helix motif; LysR family transcriptional regulator 1318828..1319841 Psychrobacter arcticus 273-4 3514806 YP_264394.1 CDS Psyc_1109 NC_007204.1 1320129 1321415 D metal Ion (Mn2+/Fe2+) transporter NRAMP family 1320129..1321415 Psychrobacter arcticus 273-4 3514807 YP_264395.1 CDS prpB NC_007204.1 1321787 1322677 D catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 1321787..1322677 Psychrobacter arcticus 273-4 3514808 YP_264396.1 CDS prpC NC_007204.1 1322815 1323954 D catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 1322815..1323954 Psychrobacter arcticus 273-4 3514809 YP_264397.1 CDS Psyc_1112 NC_007204.1 1324169 1326826 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1324169..1326826 Psychrobacter arcticus 273-4 3514810 YP_264398.1 CDS Psyc_1113 NC_007204.1 1326940 1327233 R hypothetical protein complement(1326940..1327233) Psychrobacter arcticus 273-4 3514811 YP_264399.1 CDS Psyc_1114 NC_007204.1 1327234 1327467 R RBS found.; hypothetical protein complement(1327234..1327467) Psychrobacter arcticus 273-4 3514812 YP_264400.1 CDS Psyc_1115 NC_007204.1 1327556 1328797 D DUF453 family domain; methylitaconate delta2-delta3-isomerase 1327556..1328797 Psychrobacter arcticus 273-4 3514813 YP_264401.1 CDS Psyc_1116 NC_007204.1 1329123 1329713 D acetyltransferase 1329123..1329713 Psychrobacter arcticus 273-4 3514814 YP_264402.1 CDS prpD NC_007204.1 1329848 1331350 D functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 1329848..1331350 Psychrobacter arcticus 273-4 3514815 YP_264403.1 CDS Psyc_1118 NC_007204.1 1331402 1332181 R C factor cell-cell signaling protein complement(1331402..1332181) Psychrobacter arcticus 273-4 3514816 YP_264404.1 CDS Psyc_1119 NC_007204.1 1332597 1334006 D Probable integral membrane proteindue to presence of 4 transmembrane domains; hypothetical protein 1332597..1334006 Psychrobacter arcticus 273-4 3514817 YP_264405.1 CDS Psyc_1120 NC_007204.1 1334137 1335711 D ATP/GTP binding motif; hypothetical protein 1334137..1335711 Psychrobacter arcticus 273-4 3514818 YP_264406.1 CDS arsA NC_007204.1 1335751 1336770 R arsenical pump-driving ATPase ArsA complement(1335751..1336770) Psychrobacter arcticus 273-4 3514819 YP_264407.1 CDS Psyc_1122 NC_007204.1 1336805 1337098 R RBS found.; hypothetical protein complement(1336805..1337098) Psychrobacter arcticus 273-4 3514820 YP_264408.1 CDS cstA NC_007204.1 1337222 1338901 R carbon starvation protein A complement(1337222..1338901) Psychrobacter arcticus 273-4 3514821 YP_264409.1 CDS Psyc_1124 NC_007204.1 1339113 1339781 D RBS found.; hypothetical protein 1339113..1339781 Psychrobacter arcticus 273-4 3514822 YP_264410.1 CDS hpt NC_007204.1 1339891 1340454 D Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 1339891..1340454 Psychrobacter arcticus 273-4 3514823 YP_264411.1 CDS recD NC_007204.1 1340502 1342706 R exonuclease V subunit alpha complement(1340502..1342706) Psychrobacter arcticus 273-4 3514824 YP_264412.1 CDS recB NC_007204.1 1342783 1347270 R DNA helicase/exodeoxyribonuclease V subunit beta complement(1342783..1347270) Psychrobacter arcticus 273-4 3514825 YP_264413.1 CDS recC NC_007204.1 1347343 1351881 R exoribodeoxynuclease V, gamma subunit complement(1347343..1351881) Psychrobacter arcticus 273-4 3514826 YP_264414.1 CDS Psyc_1129 NC_007204.1 1352397 1352939 D Promoter region looks good, but no RBS identified.; hypothetical protein 1352397..1352939 Psychrobacter arcticus 273-4 3514827 YP_264415.1 CDS Psyc_1130 NC_007204.1 1353012 1353830 D SignalP detects a signal peptidase target site. The site contains a predicted transmembrane helix. No RBS consensus found.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.761) with cleavage site probability 0.604 at residue 27; hypothetical protein 1353012..1353830 Psychrobacter arcticus 273-4 3514828 YP_264416.1 CDS Psyc_1131 NC_007204.1 1354449 1354733 D RBS found.; hypothetical protein 1354449..1354733 Psychrobacter arcticus 273-4 3514830 YP_264417.1 CDS Psyc_1132 NC_007204.1 1354889 1355800 R All possess a potential HTH DNA-binding motif towards their N-termini; LysR family transcriptional regulator complement(1354889..1355800) Psychrobacter arcticus 273-4 3514831 YP_264418.1 CDS Psyc_1133 NC_007204.1 1355987 1356439 D 4 transmembrane domains. DoxD-like. The nearest orf adjacent does not match a terminal quinol oxidase subunit II by hydropathy lot search, so this is probably not DoxD.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.985) with cleavage site probability 0.873 at residue 34; hypothetical protein 1355987..1356439 Psychrobacter arcticus 273-4 3514832 YP_264419.1 CDS Psyc_1134 NC_007204.1 1356670 1357488 D hypothetical protein 1356670..1357488 Psychrobacter arcticus 273-4 3514833 YP_264420.1 CDS Psyc_1135 NC_007204.1 1357728 1359344 R FAD-dependent dehydrogenase complement(1357728..1359344) Psychrobacter arcticus 273-4 3514834 YP_264421.1 CDS Psyc_1136 NC_007204.1 1360421 1360726 D The helix-turn-helix motif found here is found in a large family of proteins with diverse functions.; DNA-binding protein 1360421..1360726 Psychrobacter arcticus 273-4 3514835 YP_264422.1 CDS Psyc_1137 NC_007204.1 1360745 1362001 D hypothetical protein 1360745..1362001 Psychrobacter arcticus 273-4 3514836 YP_264423.1 CDS ppc NC_007204.1 1362462 1365242 R phosphoenolpyruvate carboxylase complement(1362462..1365242) Psychrobacter arcticus 273-4 3514837 YP_264424.1 CDS Psyc_1139 NC_007204.1 1365902 1366708 R 8 predicted transmembrane helices.; hypothetical protein complement(1365902..1366708) Psychrobacter arcticus 273-4 3514838 YP_264425.1 CDS mdcG NC_007204.1 1366734 1367654 R malonyl CoA-ACP transacylase complement(1366734..1367654) Psychrobacter arcticus 273-4 3514839 YP_264426.1 CDS mdc NC_007204.1 1367632 1368519 R ATP:dephospho-CoA triphosphoribosyl transferase complement(1367632..1368519) Psychrobacter arcticus 273-4 3514840 YP_264427.1 CDS mdcE NC_007204.1 1368470 1369174 R malonate decarboxylase, subunit E complement(1368470..1369174) Psychrobacter arcticus 273-4 3514841 YP_264428.1 CDS mdcC NC_007204.1 1369372 1370088 R malonate decarboxylase subunit gamma complement(1369372..1370088) Psychrobacter arcticus 273-4 3514842 YP_264429.1 CDS mdcB NC_007204.1 1370093 1370980 R The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta complement(1370093..1370980) Psychrobacter arcticus 273-4 3514843 YP_264430.1 CDS mdcD NC_007204.1 1370973 1371290 R malonate decarboxylase subunit delta complement(1370973..1371290) Psychrobacter arcticus 273-4 3514844 YP_264431.1 CDS mdcA NC_007204.1 1371312 1372967 R malonate decarboxylase subunit alpha complement(1371312..1372967) Psychrobacter arcticus 273-4 3514845 YP_264432.1 CDS madM NC_007204.1 1372989 1373747 R malonate/sodium symporter, MadM subunit complement(1372989..1373747) Psychrobacter arcticus 273-4 3514846 YP_264433.1 CDS madL NC_007204.1 1373823 1374227 R malonate/sodium symporter, MadL subunit complement(1373823..1374227) Psychrobacter arcticus 273-4 3514847 YP_264434.1 CDS mdcY NC_007204.1 1374461 1375132 D GntR family transcriptional regulator 1374461..1375132 Psychrobacter arcticus 273-4 3514848 YP_264435.1 CDS Psyc_1150 NC_007204.1 1375422 1376042 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.995 at residue 35; hypothetical protein 1375422..1376042 Psychrobacter arcticus 273-4 3514849 YP_264436.1 CDS Psyc_1151 NC_007204.1 1376133 1377488 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.998 at residue 23; cytochrome c alcohol dehydrogenase subunit 1376133..1377488 Psychrobacter arcticus 273-4 3514850 YP_264437.1 CDS Psyc_1152 NC_007204.1 1377566 1379167 D No indication of substrate, could be polyamine oxidase or L-amino acid oxidase; flavin monoamine oxidase related protein 1377566..1379167 Psychrobacter arcticus 273-4 3514851 YP_264438.1 CDS Psyc_1153 NC_007204.1 1379247 1379903 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.992) with cleavage site probability 0.836 at residue 35; cytochrome c family protein 1379247..1379903 Psychrobacter arcticus 273-4 3514852 YP_264439.1 CDS Psyc_1154 NC_007204.1 1380420 1381280 R RBS found. Aligns weakly to universal stress protein HMM.; hypothetical protein complement(1380420..1381280) Psychrobacter arcticus 273-4 3514853 YP_264440.1 CDS deoD NC_007204.1 1382083 1382976 D Homology searches provide good matches to archeal and eukaryal 5'-methylthioadenosine phosphorylase, but these enzymes are not noted to occur in bacteria.; methylthioadenosine phosphorylase 1382083..1382976 Psychrobacter arcticus 273-4 3514854 YP_264441.1 CDS Psyc_1156 NC_007204.1 1383108 1384175 R Aligns well to eukaryotic methyltransferases. Contains SAM binding motif. Contains generic methyltransferase motif.; methyltransferase complement(1383108..1384175) Psychrobacter arcticus 273-4 3514855 YP_264442.1 CDS Psyc_1157 NC_007204.1 1384271 1384894 R Contains DUF703 domain.; hypothetical protein complement(1384271..1384894) Psychrobacter arcticus 273-4 3514856 YP_264443.1 CDS Psyc_1158 NC_007204.1 1384982 1385722 R glycosyl transferase family protein complement(1384982..1385722) Psychrobacter arcticus 273-4 3514056 YP_264444.1 CDS Psyc_1159 NC_007204.1 1385740 1386549 R RBS found. Contains a predicted signal peptidase target sequence.; hypothetical protein complement(1385740..1386549) Psychrobacter arcticus 273-4 3514057 YP_264445.1 CDS Psyc_1160 NC_007204.1 1386643 1387611 R RBS found. Contains a weak alignment to the radical SAM superfamily domain and a cytochrome C heme-binding motif.; hypothetical protein complement(1386643..1387611) Psychrobacter arcticus 273-4 3514058 YP_264446.1 CDS Psyc_1161 NC_007204.1 1387860 1389590 D 5 probable transmembrane helices near to the N-terminus.; phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 1387860..1389590 Psychrobacter arcticus 273-4 3514059 YP_264447.1 CDS Psyc_1162 NC_007204.1 1389665 1390366 D two component system regulatory protein 1389665..1390366 Psychrobacter arcticus 273-4 3514060 YP_264448.1 CDS Psyc_1163 NC_007204.1 1390467 1391780 D 1 probable transmembrane domain.; Signal transduction histidine kinase sensor 1390467..1391780 Psychrobacter arcticus 273-4 3514061 YP_264449.1 CDS dgkA NC_007204.1 1392132 1392575 D diacylglycerol kinase 1392132..1392575 Psychrobacter arcticus 273-4 3514062 YP_264450.1 CDS Psyc_1165 NC_007204.1 1392623 1393342 D PAP phosphotase domain; hypothetical protein 1392623..1393342 Psychrobacter arcticus 273-4 3514063 YP_264451.1 CDS Psyc_1166 NC_007204.1 1393683 1394714 R RBS found; hypothetical protein complement(1393683..1394714) Psychrobacter arcticus 273-4 3514064 YP_264452.1 CDS Psyc_1167 NC_007204.1 1394831 1395301 R This gene occurs close proximity to six other fatty acid biosynthesis orfs.; acyl-CoA thioesterase complement(1394831..1395301) Psychrobacter arcticus 273-4 3514065 YP_264453.1 CDS Psyc_1168 NC_007204.1 1395400 1397094 R medium chain acyl-CoA ligase complement(1395400..1397094) Psychrobacter arcticus 273-4 3514066 YP_264454.1 CDS Psyc_1169 NC_007204.1 1397160 1398362 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1397160..1398362) Psychrobacter arcticus 273-4 3514067 YP_264455.1 CDS paaH NC_007204.1 1398446 1400014 R converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxyacyl-CoA dehydrogenase complement(1398446..1400014) Psychrobacter arcticus 273-4 3514068 YP_264456.1 CDS Psyc_1171 NC_007204.1 1400092 1400868 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1400092..1400868) Psychrobacter arcticus 273-4 3514069 YP_264457.1 CDS Psyc_1172 NC_007204.1 1401195 1402349 D acyl-CoA dehydrogenase 1401195..1402349 Psychrobacter arcticus 273-4 3514070 YP_264458.1 CDS dcaK NC_007204.1 1402458 1403723 D Aromatic Acid:H+ Symporter (AAHS) Family; Citation: Applied and Environmental Microbiology, October 2001, p. 4817-4827, Vol. 67, No. 10; MFS short chain dicaboxylate:H+ symporter DcaK 1402458..1403723 Psychrobacter arcticus 273-4 3514071 YP_264459.1 CDS Psyc_1174 NC_007204.1 1404421 1405266 D Nearly 60% ID to other transcriptional regulators in BLAST and the HTH motif hit is also strong InterPro:buthitstoIclRfamilyoftranscriptional regulators are weak.; IclR family transcriptional regulator 1404421..1405266 Psychrobacter arcticus 273-4 3514072 YP_264460.1 CDS Psyc_1175 NC_007204.1 1405611 1407143 R There is no clear indicator of the exact function of this acetyl-CoA hydrolase/transferase family member.; acetyl-CoA hydrolase/transferase family protein complement(1405611..1407143) Psychrobacter arcticus 273-4 3514073 YP_264461.1 CDS ggt NC_007204.1 1407717 1409654 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 1.000 at residue 39; gamma-glutamyltransferase 1 1407717..1409654 Psychrobacter arcticus 273-4 3514074 YP_264462.1 CDS dnaE NC_007204.1 1410102 1413845 D DNA polymerase III is comprised of three tightly associated subunits, alpha, epsilon and theta.; DNA polymerase III subunit alpha 1410102..1413845 Psychrobacter arcticus 273-4 3514075 YP_264463.1 CDS Psyc_1178 NC_007204.1 1413893 1414789 D rRNA methyltransferase SpoU family protein 1413893..1414789 Psychrobacter arcticus 273-4 3514076 YP_264464.1 CDS Psyc_1179 NC_007204.1 1414995 1415438 D hypothetical protein 1414995..1415438 Psychrobacter arcticus 273-4 3514077 YP_264465.1 CDS cysE NC_007204.1 1415628 1416539 D Contains four hexapeptide repeat motifs.; serine O-acetyltransferase 1415628..1416539 Psychrobacter arcticus 273-4 3514078 YP_264466.1 CDS Psyc_1181 NC_007204.1 1416597 1417130 R hypothetical protein complement(1416597..1417130) Psychrobacter arcticus 273-4 3514079 YP_264467.1 CDS folB NC_007204.1 1417120 1417542 R dihydroneopterin aldolase complement(1417120..1417542) Psychrobacter arcticus 273-4 3514080 YP_264468.1 CDS rarD NC_007204.1 1417607 1418566 R There are 9 transmembrane domains.; DMT superfamily efflux pump, RarD complement(1417607..1418566) Psychrobacter arcticus 273-4 3514081 YP_264469.1 CDS Psyc_1184 NC_007204.1 1418677 1421013 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate and catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase complement(1418677..1421013) Psychrobacter arcticus 273-4 3514082 YP_264470.1 CDS hisC NC_007204.1 1421132 1422274 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(1421132..1422274) Psychrobacter arcticus 273-4 3514083 YP_264471.1 CDS pheA NC_007204.1 1422416 1423597 R Contains 3 domains: chorismate mutase, prephenate dehydratase, and an ACT (amino acid synthesis regulatory domain). This enzyme is bifunctional in the phenylalanine synthesis pathway.; prephenate dehydratase complement(1422416..1423597) Psychrobacter arcticus 273-4 3514084 YP_264472.1 CDS tal NC_007204.1 1424045 1424986 D Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 1424045..1424986 Psychrobacter arcticus 273-4 3514085 YP_264473.1 CDS Psyc_1188 NC_007204.1 1425173 1425625 D SignalP detects a signal peptidase target site. RBS found.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 at residue 20; hypothetical protein 1425173..1425625 Psychrobacter arcticus 273-4 3514086 YP_264474.1 CDS apt NC_007204.1 1425845 1426414 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(1425845..1426414) Psychrobacter arcticus 273-4 3514087 YP_264475.1 CDS rubA NC_007204.1 1426890 1427054 D rubredoxin protein 1426890..1427054 Psychrobacter arcticus 273-4 3514088 YP_264476.1 CDS Psyc_1191 NC_007204.1 1427083 1428120 D alpha/beta hydrolase 1427083..1428120 Psychrobacter arcticus 273-4 3514089 YP_264477.1 CDS Psyc_1192 NC_007204.1 1428228 1429406 R RBS found. One predicted transmembrane helix. Contains a predicted signal peptidase target sequence.; hypothetical protein complement(1428228..1429406) Psychrobacter arcticus 273-4 3514090 YP_264478.1 CDS Psyc_1193 NC_007204.1 1429877 1430809 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.754) with cleavage site probability 0.616 at residue 29; DMT superfamily efflux pump 1429877..1430809 Psychrobacter arcticus 273-4 3514091 YP_264479.1 CDS Psyc_1194 NC_007204.1 1430942 1434148 R autotransporter domain-containing protein complement(1430942..1434148) Psychrobacter arcticus 273-4 3514092 YP_264480.1 CDS Psyc_1195 NC_007204.1 1434426 1435859 R xanthine/uracil symporter complement(1434426..1435859) Psychrobacter arcticus 273-4 3514093 YP_264481.1 CDS sdaA NC_007204.1 1436252 1437685 D Beta chain domain at N-terminus followed closely by alpha chain to C-terminus.; L-serine ammonia-lyase 1436252..1437685 Psychrobacter arcticus 273-4 3514094 YP_264482.1 CDS Psyc_1197 NC_007204.1 1437943 1438341 R Predicted by generation, glimmer and critica. 4 base rbs.; hypothetical protein complement(1437943..1438341) Psychrobacter arcticus 273-4 3514095 YP_264483.1 CDS argJ NC_007204.1 1438652 1439875 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(1438652..1439875) Psychrobacter arcticus 273-4 3514096 YP_264484.1 CDS xthA NC_007204.1 1439948 1440772 R removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III complement(1439948..1440772) Psychrobacter arcticus 273-4 3514097 YP_264485.1 CDS Psyc_1200 NC_007204.1 1441088 1441654 D thioesterase 1441088..1441654 Psychrobacter arcticus 273-4 3514098 YP_264486.1 CDS Psyc_1201 NC_007204.1 1441922 1442791 R short chain dehydrogenase complement(1441922..1442791) Psychrobacter arcticus 273-4 3514099 YP_264487.1 CDS sohB NC_007204.1 1443136 1444110 R SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease complement(1443136..1444110) Psychrobacter arcticus 273-4 3514100 YP_264488.1 CDS aspS NC_007204.1 1444480 1446306 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1444480..1446306 Psychrobacter arcticus 273-4 3514101 YP_264489.1 CDS Psyc_1204 NC_007204.1 1446374 1447351 D lipid A biosynthesis acyltransferase 1446374..1447351 Psychrobacter arcticus 273-4 3514102 YP_264490.1 CDS Psyc_1205 NC_007204.1 1447464 1448264 D good rbs; hypothetical protein 1447464..1448264 Psychrobacter arcticus 273-4 3514103 YP_264491.1 CDS Psyc_1206 NC_007204.1 1448669 1450234 D glycosyl transferase family protein 1448669..1450234 Psychrobacter arcticus 273-4 3514104 YP_264492.1 CDS Psyc_1207 NC_007204.1 1450235 1451002 D These glycosyl transferases are involved in LPS biosynthesis.; glycosyl transferase family protein 1450235..1451002 Psychrobacter arcticus 273-4 3514105 YP_264493.1 CDS Psyc_1208 NC_007204.1 1451054 1451275 D RBS found.; hypothetical protein 1451054..1451275 Psychrobacter arcticus 273-4 3514106 YP_264494.1 CDS Psyc_1209 NC_007204.1 1451660 1452685 D RBS found.; hypothetical protein 1451660..1452685 Psychrobacter arcticus 273-4 3514107 YP_264495.1 CDS Psyc_1210 NC_007204.1 1453290 1454408 R No rbs. Predicted by glimmer and critica.; hypothetical protein complement(1453290..1454408) Psychrobacter arcticus 273-4 3514108 YP_264496.1 CDS rffG NC_007204.1 1455014 1456096 D dTDP-glucose 4,6-dehydratase 1455014..1456096 Psychrobacter arcticus 273-4 3514110 YP_264497.1 CDS rfbD NC_007204.1 1456132 1457037 D dTDP-4-dehydrorhamnose reductase 1456132..1457037 Psychrobacter arcticus 273-4 3514111 YP_264498.1 CDS rfbA NC_007204.1 1457034 1457924 D glucose-1-phosphate thymidylyltransferase 1457034..1457924 Psychrobacter arcticus 273-4 3514112 YP_264499.1 CDS rfbC NC_007204.1 1457952 1458524 D dTDP-4-dehydrorhamnose 3,5-epimerase 1457952..1458524 Psychrobacter arcticus 273-4 3515172 YP_264500.1 CDS ilvE NC_007204.1 1458754 1459683 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(1458754..1459683) Psychrobacter arcticus 273-4 3515173 YP_264501.1 CDS glnE NC_007204.1 1459973 1462822 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(1459973..1462822) Psychrobacter arcticus 273-4 3515174 YP_264502.1 CDS Psyc_1218 NC_007204.1 1463113 1463544 D DsrE-like protein 1463113..1463544 Psychrobacter arcticus 273-4 3515175 YP_264503.1 CDS Psyc_1219 NC_007204.1 1463650 1463973 D RBS found. This orf occurs between a probable DsrE-like protein and a probable DsrC-like protein.; hypothetical protein 1463650..1463973 Psychrobacter arcticus 273-4 3515176 YP_264504.1 CDS Psyc_1220 NC_007204.1 1464072 1464410 D RBS found. Overlaps a probable DsrC-like protein by 4 bp. There is a probable DsrE-like protein two orfs upstream.; hypothetical protein 1464072..1464410 Psychrobacter arcticus 273-4 3515177 YP_264505.1 CDS Psyc_1221 NC_007204.1 1464407 1464763 D DsrC-like protein 1464407..1464763 Psychrobacter arcticus 273-4 3515178 YP_264506.1 CDS spoU NC_007204.1 1464855 1465415 R tRNA/rRNA methyltransferase complement(1464855..1465415) Psychrobacter arcticus 273-4 3515179 YP_264507.1 CDS Psyc_1223 NC_007204.1 1465676 1465816 D similar to E. coli ecnA; entericidin A 1465676..1465816 Psychrobacter arcticus 273-4 3515180 YP_264508.1 CDS hemN_rel NC_007204.1 1465912 1467237 R The amino acid sequence also aligns with a radical SAM catalytic HMM. This supports its probable role in an anaerobic oxidation.; coproporphyrinogen III oxidase, anaerobic complement(1465912..1467237) Psychrobacter arcticus 273-4 3515181 YP_264509.1 CDS norM NC_007204.1 1467794 1469161 D 12 probable transmembrane domains.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.884) with cleavage site probability 0.838 at residue 33; multidrug efflux pump, NorM, MATE family 1467794..1469161 Psychrobacter arcticus 273-4 3515182 YP_264510.1 CDS accB NC_007204.1 1469423 1469851 D biotin carboxyl carrier protein 1469423..1469851 Psychrobacter arcticus 273-4 3515183 YP_264511.1 CDS accC NC_007204.1 1470083 1471444 D acetyl-CoA carboxylase, biotin carboxylase 1470083..1471444 Psychrobacter arcticus 273-4 3515184 YP_264512.1 CDS Psyc_1228 NC_007204.1 1471585 1472199 R 4 base rbs. Predicted by generation, glimmer and critica.; hypothetical protein complement(1471585..1472199) Psychrobacter arcticus 273-4 3515185 YP_264513.1 CDS leuA NC_007204.1 1472613 1474397 R 2-isopropylmalate synthase complement(1472613..1474397) Psychrobacter arcticus 273-4 3515186 YP_264514.1 CDS Psyc_1230 NC_007204.1 1474615 1475103 D AsnC family transcriptional regulator 1474615..1475103 Psychrobacter arcticus 273-4 3515187 YP_264515.1 CDS Psyc_1231 NC_007204.1 1475123 1476409 R 12 transmembrane domains.; major facilitator superfamily transporter complement(1475123..1476409) Psychrobacter arcticus 273-4 3515188 YP_264516.1 CDS Psyc_1232 NC_007204.1 1476659 1478014 R protein kinase complement(1476659..1478014) Psychrobacter arcticus 273-4 3515189 YP_264517.1 CDS moeB NC_007204.1 1478087 1478896 R MoeZ_MoeB HMM matched in Pfam. ThiF domain is present.; molybdopterin biosynthesis protein complement(1478087..1478896) Psychrobacter arcticus 273-4 3515190 YP_264518.1 CDS Psyc_1234 NC_007204.1 1478906 1479823 R SAM binding motif, Methylase motif both found by PROSITE; HemK family modification methylase complement(1478906..1479823) Psychrobacter arcticus 273-4 3515191 YP_264519.1 CDS ampG NC_007204.1 1479871 1481523 R 14 transmembrane domains. Subcellular location: Integral membrane protein. Category is Drug/analog sensitivity; Citation: Microbiology. 1995 May; 141 ( Pt 5): 1085-92 and http://uqbar.rockefeller.edu/regulons/ClustersWadsworth/u_ prommatches84.html; muropeptide MFS uptake transporter AmpG complement(1479871..1481523) Psychrobacter arcticus 273-4 3515192 YP_264520.1 CDS Psyc_1236 NC_007204.1 1482020 1482949 D possible cbl regulon regulator based on homolgy with BLAST; transcriptional regulator CysB-like protein 1482020..1482949 Psychrobacter arcticus 273-4 3515193 YP_264521.1 CDS Psyc_1237 NC_007204.1 1483154 1485688 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.663) with cleavage site probability 0.185 at residue 24; quinoprotein glucose dehydrogenase 1483154..1485688 Psychrobacter arcticus 273-4 3515194 YP_264522.1 CDS Psyc_1238 NC_007204.1 1485977 1486996 D luciferase 1485977..1486996 Psychrobacter arcticus 273-4 3515195 YP_264523.1 CDS Psyc_1239 NC_007204.1 1487124 1488011 R AEC family transporter complement(1487124..1488011) Psychrobacter arcticus 273-4 3515196 YP_264524.1 CDS gidA NC_007204.1 1488420 1490318 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(1488420..1490318) Psychrobacter arcticus 273-4 3515197 YP_264525.1 CDS Psyc_1241 NC_007204.1 1490582 1491112 R Predicted by generation, glimmer and critica. 3 base rbs.; hypothetical protein complement(1490582..1491112) Psychrobacter arcticus 273-4 3515198 YP_264526.1 CDS Psyc_1242 NC_007204.1 1491351 1491701 R glutaredoxin-like protein complement(1491351..1491701) Psychrobacter arcticus 273-4 3515199 YP_264527.1 CDS ispF NC_007204.1 1491851 1492357 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(1491851..1492357) Psychrobacter arcticus 273-4 3515200 YP_264528.1 CDS mnmA NC_007204.1 1492614 1493840 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1492614..1493840 Psychrobacter arcticus 273-4 3515201 YP_264529.1 CDS purB NC_007204.1 1493956 1495347 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1493956..1495347 Psychrobacter arcticus 273-4 3515202 YP_264530.1 CDS Psyc_1246 NC_007204.1 1495442 1495651 R Predicted by generation, glimmer. 25 bp cleavage site. 1 transmembrane domain weak rbs; hypothetical protein complement(1495442..1495651) Psychrobacter arcticus 273-4 3515203 YP_264531.1 CDS Psyc_1247 NC_007204.1 1495781 1496953 D hypothetical protein 1495781..1496953 Psychrobacter arcticus 273-4 3515204 YP_264532.1 CDS Psyc_1248 NC_007204.1 1497225 1497914 R RBS found. This orf aligns weakly to the C-terminal end of PutA, and occurs immediately downstream of that gene in Psychrobacter 273-4.; hypothetical protein complement(1497225..1497914) Psychrobacter arcticus 273-4 3515205 YP_264533.1 CDS Psyc_1249 NC_007204.1 1497926 1501168 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(1497926..1501168) Psychrobacter arcticus 273-4 3515206 YP_264534.1 CDS Psyc_1250 NC_007204.1 1501890 1502621 D TolQ proton channel 1501890..1502621 Psychrobacter arcticus 273-4 3515207 YP_264535.1 CDS tolR NC_007204.1 1502618 1503076 D 4 bp overlap with a TolQ-like ORF; biopolymer transport protein TolR 1502618..1503076 Psychrobacter arcticus 273-4 3515208 YP_264536.1 CDS Psyc_1252 NC_007204.1 1503201 1504208 D RBS found. Weak alignment (above trusted cutoff) to TIGR TonB C-terminal subfamily HMM. Serine rich region identified N-terminal to this. Contains 1 predicted transmembrane domain.; hypothetical protein 1503201..1504208 Psychrobacter arcticus 273-4 3515209 YP_264537.1 CDS tolB NC_007204.1 1504345 1505637 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 1.000 at residue 27; TolB periplasmic receptor 1504345..1505637 Psychrobacter arcticus 273-4 3515210 YP_264538.1 CDS Psyc_1254 NC_007204.1 1506372 1506974 R TRP repressor binding protein complement(1506372..1506974) Psychrobacter arcticus 273-4 3515211 YP_264539.1 CDS yeeE NC_007204.1 1507444 1508700 D TolB periplamsic protein 1507444..1508700 Psychrobacter arcticus 273-4 3515212 YP_264540.1 CDS Psyc_1256 NC_007204.1 1509113 1510048 R RBS found. Aligns to TIGR hypothetical equivalog for DUF152 proteins.; hypothetical protein complement(1509113..1510048) Psychrobacter arcticus 273-4 3515213 YP_264541.1 CDS rluD NC_007204.1 1510078 1511280 R In E. coli, RluD (SfhB) modifies uridine to pseudouridine at 23S RNA U1911, 1915, and 1917, RluC modifies 955, 2504 and 2580, and RluA modifies U746 and tRNA U32. An additional homolog from E. coli, YqcB (EGAD|35358|EC2791), is uncharacterized.; ribosomal large subunit pseudouridine synthase D complement(1510078..1511280) Psychrobacter arcticus 273-4 3515214 YP_264542.1 CDS Psyc_1258 NC_007204.1 1512103 1513182 D lipoprotein 1512103..1513182 Psychrobacter arcticus 273-4 3515215 YP_264543.1 CDS dnaG NC_007204.1 1513396 1515558 D DNA primase 1513396..1515558 Psychrobacter arcticus 273-4 3515216 YP_264544.1 CDS rpoD NC_007204.1 1516085 1518028 D contains the 4 conserved regions of rpoD also nonessential domains associated with other rpoD; sigma-70 factor (RpoD) 1516085..1518028 Psychrobacter arcticus 273-4 3515217 YP_264545.1 CDS Psyc_1261 NC_007204.1 1518409 1519335 D Protein of unknown function UPF0187 domain; hypothetical protein 1518409..1519335 Psychrobacter arcticus 273-4 3515218 YP_264546.1 CDS Psyc_1262 NC_007204.1 1519603 1519995 D hypothetical protein 1519603..1519995 Psychrobacter arcticus 273-4 3515219 YP_264547.1 CDS nrdA NC_007204.1 1520712 1522988 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1520712..1522988 Psychrobacter arcticus 273-4 3515220 YP_264548.1 CDS Psyc_1264 NC_007204.1 1523098 1523886 D 1 transmembrane region ,has weak rbs so may be a protein despite only glimmer prediction; hypothetical protein 1523098..1523886 Psychrobacter arcticus 273-4 3515221 YP_264549.1 CDS Psyc_1265 NC_007204.1 1524362 1524613 D Overlaps a StbE like ORF.; StbD-like prevent host death protein 1524362..1524613 Psychrobacter arcticus 273-4 3515222 YP_264550.1 CDS Psyc_1266 NC_007204.1 1524603 1524890 D hypothetical protein 1524603..1524890 Psychrobacter arcticus 273-4 3515223 YP_264551.1 CDS Psyc_1267 NC_007204.1 1524958 1525323 D RBS found.; hypothetical protein 1524958..1525323 Psychrobacter arcticus 273-4 3515224 YP_264552.1 CDS nrdB NC_007204.1 1525414 1526547 D B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 1525414..1526547 Psychrobacter arcticus 273-4 3515225 YP_264553.1 CDS Psyc_1269 NC_007204.1 1526770 1527030 D ferrodoxin 1526770..1527030 Psychrobacter arcticus 273-4 3515226 YP_264554.1 CDS algW NC_007204.1 1527217 1528545 R serine protease complement(1527217..1528545) Psychrobacter arcticus 273-4 3515227 YP_264555.1 CDS Psyc_1271 NC_007204.1 1528949 1529785 D (DUF34) protein domain; hypothetical protein 1528949..1529785 Psychrobacter arcticus 273-4 3515228 YP_264556.1 CDS Psyc_1272 NC_007204.1 1530723 1531931 D lytic transglycosylase 1530723..1531931 Psychrobacter arcticus 273-4 3515229 YP_264557.1 CDS Psyc_1273 NC_007204.1 1532054 1535059 R One Transglycosylase domain and 7 LysM lysin domains.; membrane-bound lytic murein transglycosylase D complement(1532054..1535059) Psychrobacter arcticus 273-4 3515230 YP_264558.1 CDS Psyc_1274 NC_007204.1 1535240 1535734 R Predicted by generation, glimmer and critica. 3 base rbs. 1 transmembrane domain, 36 bp cleavage site; hypothetical protein complement(1535240..1535734) Psychrobacter arcticus 273-4 3515231 YP_264559.1 CDS Psyc_1275 NC_007204.1 1536166 1537587 R Possible transmembrane protein with CBS domains; hypothetical protein complement(1536166..1537587) Psychrobacter arcticus 273-4 3515232 YP_264560.1 CDS yajC NC_007204.1 1537959 1538285 D protein translocase subunit yajC 1537959..1538285 Psychrobacter arcticus 273-4 3515233 YP_264561.1 CDS secD NC_007204.1 1538715 1540592 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1538715..1540592 Psychrobacter arcticus 273-4 3515234 YP_264562.1 CDS secF NC_007204.1 1540602 1541846 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1540602..1541846 Psychrobacter arcticus 273-4 3515235 YP_264563.1 CDS dinF NC_007204.1 1542058 1543476 D DNA-damage-inducible protein F 1542058..1543476 Psychrobacter arcticus 273-4 3515236 YP_264564.1 CDS Psyc_1280 NC_007204.1 1543571 1544302 D branched chain amino acid efflux pump, LivE family, large subunit 1543571..1544302 Psychrobacter arcticus 273-4 3515237 YP_264565.1 CDS Psyc_1281 NC_007204.1 1544292 1544651 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.958) with cleavage site probability 0.952 at residue 23; hypothetical protein 1544292..1544651 Psychrobacter arcticus 273-4 3515238 YP_264566.1 CDS purF NC_007204.1 1544760 1546295 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(1544760..1546295) Psychrobacter arcticus 273-4 3515239 YP_264567.1 CDS cvpA NC_007204.1 1546537 1547034 R colicin V production protein complement(1546537..1547034) Psychrobacter arcticus 273-4 3515240 YP_264568.1 CDS pyrD NC_007204.1 1547131 1548165 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(1547131..1548165) Psychrobacter arcticus 273-4 3515241 YP_264569.1 CDS Psyc_1285 NC_007204.1 1548495 1548953 R phospho-histidine phosphatase complement(1548495..1548953) Psychrobacter arcticus 273-4 3515242 YP_264570.2 CDS gpsA NC_007204.1 1549143 1550261 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(1549143..1550261) Psychrobacter arcticus 273-4 3515243 YP_264571.1 CDS Psyc_1287 NC_007204.1 1550774 1551433 R aldehyde dehydrogenase complement(1550774..1551433) Psychrobacter arcticus 273-4 3515244 YP_264572.1 CDS Psyc_1288 NC_007204.1 1551499 1552620 R AFG1-like ATPase complement(1551499..1552620) Psychrobacter arcticus 273-4 3515245 YP_264573.1 CDS Psyc_1289 NC_007204.1 1552994 1553653 R hypothetical protein complement(1552994..1553653) Psychrobacter arcticus 273-4 3515246 YP_264574.1 CDS Psyc_1290 NC_007204.1 1554069 1554437 D RBS found. SignalP detects a signal peptidase target site.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.851 at residue 23; hypothetical protein 1554069..1554437 Psychrobacter arcticus 273-4 3515247 YP_264575.1 CDS xseA NC_007204.1 1554649 1556199 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1554649..1556199 Psychrobacter arcticus 273-4 3515248 YP_264576.1 CDS Psyc_1292 NC_007204.1 1556388 1556633 D RBS found; hypothetical protein 1556388..1556633 Psychrobacter arcticus 273-4 3515249 YP_264577.1 CDS pncB NC_007204.1 1556643 1557884 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1556643..1557884) Psychrobacter arcticus 273-4 3515250 YP_264578.1 CDS Psyc_1294 NC_007204.1 1558422 1559957 R aldehyde dehydrogenase complement(1558422..1559957) Psychrobacter arcticus 273-4 3515251 YP_264579.1 CDS lipB NC_007204.1 1560481 1561341 D protein ligase 1560481..1561341 Psychrobacter arcticus 273-4 3515252 YP_264580.1 CDS ppa NC_007204.1 1561538 1562068 D catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 1561538..1562068 Psychrobacter arcticus 273-4 3515253 YP_264581.1 CDS Psyc_1297 NC_007204.1 1562205 1562669 D RBS found. Contains one predicted transmembrane domain.; hypothetical protein 1562205..1562669 Psychrobacter arcticus 273-4 3515254 YP_264582.1 CDS Psyc_1298 NC_007204.1 1562781 1563176 D RBS found; hypothetical protein 1562781..1563176 Psychrobacter arcticus 273-4 3515255 YP_264583.1 CDS Psyc_1299 NC_007204.1 1564044 1564931 R fatty acyl-CoA reductase complement(1564044..1564931) Psychrobacter arcticus 273-4 3515256 YP_264584.1 CDS Psyc_1300 NC_007204.1 1565152 1566183 R nifR3 is thought to be a regulatory protein, rather than a catalytic protein, however, the two families (Dihydrouridylate synthase, and nifR3) may constitute a larger family with conserved cysteine residues.; NifR3 family TIM-barrel protein complement(1565152..1566183) Psychrobacter arcticus 273-4 3515257 YP_264585.1 CDS Psyc_1301 NC_007204.1 1566327 1568375 R BCCT family betaine/choline/carnitine/glycine transporter complement(1566327..1568375) Psychrobacter arcticus 273-4 3515258 YP_264586.1 CDS Psyc_1302 NC_007204.1 1568597 1569037 R histidine triad (HIT) protein complement(1568597..1569037) Psychrobacter arcticus 273-4 3515259 YP_264587.1 CDS Psyc_1303 NC_007204.1 1569234 1570049 D RBS found.; hypothetical protein 1569234..1570049 Psychrobacter arcticus 273-4 3515260 YP_264588.1 CDS ilvD NC_007204.1 1570230 1572116 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1570230..1572116 Psychrobacter arcticus 273-4 3515261 YP_264589.1 CDS Psyc_1305 NC_007204.1 1572464 1573711 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.726) with cleavage site probability 0.687 at residue 20; CPA1 family Na(+)/H(+) antiporter 1572464..1573711 Psychrobacter arcticus 273-4 3515262 YP_264590.1 CDS Psyc_1306 NC_007204.1 1573908 1575380 R beta-lactamase complement(1573908..1575380) Psychrobacter arcticus 273-4 3515263 YP_264591.1 CDS Psyc_1307 NC_007204.1 1575490 1576110 R hypothetical protein complement(1575490..1576110) Psychrobacter arcticus 273-4 3515264 YP_264592.1 CDS Psyc_1308 NC_007204.1 1576097 1577014 R RBS found; hypothetical protein complement(1576097..1577014) Psychrobacter arcticus 273-4 3515265 YP_264593.1 CDS fabG NC_007204.1 1577205 1578605 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(1577205..1578605) Psychrobacter arcticus 273-4 3515266 YP_264594.1 CDS Psyc_1310 NC_007204.1 1579271 1580851 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1579271..1580851 Psychrobacter arcticus 273-4 3515267 YP_264595.1 CDS Psyc_1311 NC_007204.1 1581007 1582086 D domain hit to Protein of unknown function DUF344; hypothetical protein 1581007..1582086 Psychrobacter arcticus 273-4 3515268 YP_264596.1 CDS pilZ NC_007204.1 1582271 1582618 R type IV fimbriae assembly protein complement(1582271..1582618) Psychrobacter arcticus 273-4 3515269 YP_264597.1 CDS holB NC_007204.1 1582757 1583857 R Citation: Song MS, Pham PT, Olson M, Carter JR, Franden MA, Schaaper RM, McHenry CS. 2001. The delta and delta ' subunits of the DNA polymerase III holoenzyme are essential for initiation complex formation and processive elongation. J Biol Chem. 276:35165-35175.; DNA polymerase III, delta prime subunit complement(1582757..1583857) Psychrobacter arcticus 273-4 3515270 YP_264598.1 CDS kdsB NC_007204.1 1584020 1584826 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(1584020..1584826) Psychrobacter arcticus 273-4 3515271 YP_264599.1 CDS lpxK NC_007204.1 1584870 1586027 R transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(1584870..1586027) Psychrobacter arcticus 273-4 3515272 YP_264600.1 CDS msbA NC_007204.1 1586037 1587824 R lipid/multidrug ABC transporter MsbA ATPase and inner membrane domains complement(1586037..1587824) Psychrobacter arcticus 273-4 3515273 YP_264601.1 CDS Psyc_1317 NC_007204.1 1587960 1588391 R biopolymer transport protein ExbD/TolR complement(1587960..1588391) Psychrobacter arcticus 273-4 3515274 YP_264602.1 CDS Psyc_1318 NC_007204.1 1588570 1589214 R MotA/TolQ/ExbB proton channel complement(1588570..1589214) Psychrobacter arcticus 273-4 3515275 YP_264603.1 CDS parB NC_007204.1 1589303 1590430 R This group of chromosomal and plasmid partition proteins are related to ParB, including Spo0J, RepB, and SopB.; chromosome segregation DNA-binding protein complement(1589303..1590430) Psychrobacter arcticus 273-4 3515276 YP_264604.1 CDS Psyc_1320 NC_007204.1 1590578 1591357 R chromosome segregation ATPase complement(1590578..1591357) Psychrobacter arcticus 273-4 3515277 YP_264605.1 CDS gidB NC_007204.1 1591491 1592207 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(1591491..1592207) Psychrobacter arcticus 273-4 3515278 YP_264606.1 CDS Psyc_1322 NC_007204.1 1592572 1595427 D hypothetical protein 1592572..1595427 Psychrobacter arcticus 273-4 3515279 YP_264607.1 CDS Psyc_1323 NC_007204.1 1595533 1596684 D This is a long protein and hits to transcriptinal factors are only in middle also no helix turn helix domains which would signify nucleic acid binding; hypothetical protein 1595533..1596684 Psychrobacter arcticus 273-4 3515280 YP_264608.1 CDS Psyc_1324 NC_007204.1 1596754 1597422 D hypothetical protein 1596754..1597422 Psychrobacter arcticus 273-4 3515281 YP_264609.1 CDS Psyc_1325 NC_007204.1 1597688 1598665 R VIC family potassium channel protein complement(1597688..1598665) Psychrobacter arcticus 273-4 3515282 YP_264610.1 CDS ompW NC_007204.1 1599243 1599872 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 at residue 22; OmpW family outer membrane protein 1599243..1599872 Psychrobacter arcticus 273-4 3515283 YP_264611.1 CDS aceF NC_007204.1 1600173 1601909 R dihydrolipoyllysine acetyltransferase component of pyruvate dehydrogenase complex complement(1600173..1601909) Psychrobacter arcticus 273-4 3515284 YP_264612.1 CDS aceE NC_007204.1 1601935 1604748 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(1601935..1604748) Psychrobacter arcticus 273-4 3515285 YP_264613.1 CDS Psyc_1329 NC_007204.1 1605538 1606278 R not enough evidence to determine sub family membership; TetR family transcriptional regulator complement(1605538..1606278) Psychrobacter arcticus 273-4 3515286 YP_264614.1 CDS Psyc_1330 NC_007204.1 1606444 1607469 R hypothetical protein complement(1606444..1607469) Psychrobacter arcticus 273-4 3515287 YP_264615.1 CDS Psyc_1331 NC_007204.1 1607955 1608632 R RBS found.; hypothetical protein complement(1607955..1608632) Psychrobacter arcticus 273-4 3515288 YP_264616.1 CDS Psyc_1332 NC_007204.1 1608917 1610533 R glycerol kinase complement(1608917..1610533) Psychrobacter arcticus 273-4 3515289 YP_264617.1 CDS sthA NC_007204.1 1611045 1612688 R catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase complement(1611045..1612688) Psychrobacter arcticus 273-4 3515290 YP_264618.1 CDS Psyc_1334 NC_007204.1 1612885 1613781 R RBS found. Aligns to DUF299 domain of unknown function HMM.; hypothetical protein complement(1612885..1613781) Psychrobacter arcticus 273-4 3515291 YP_264619.1 CDS ppsA NC_007204.1 1614150 1616534 D catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1614150..1616534 Psychrobacter arcticus 273-4 3515292 YP_264620.1 CDS Psyc_1336 NC_007204.1 1616706 1617689 D contains 3 predicted transmembrane domains; hypothetical protein 1616706..1617689 Psychrobacter arcticus 273-4 3515293 YP_264621.1 CDS rpsF NC_007204.1 1617980 1618378 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1617980..1618378 Psychrobacter arcticus 273-4 3515294 YP_264622.1 CDS rpsR NC_007204.1 1618395 1618625 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1618395..1618625 Psychrobacter arcticus 273-4 3515295 YP_264623.1 CDS rplI NC_007204.1 1618646 1619146 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1618646..1619146 Psychrobacter arcticus 273-4 3515296 YP_264624.1 CDS Psyc_1340 NC_007204.1 1619295 1619537 D RBS found.; hypothetical protein 1619295..1619537 Psychrobacter arcticus 273-4 3515297 YP_264625.1 CDS Psyc_1342 NC_007204.1 1620372 1621508 D glycerate kinase 1620372..1621508 Psychrobacter arcticus 273-4 3515299 YP_264626.1 CDS Psyc_1344 NC_007204.1 1621982 1622404 R RBS found; hypothetical protein complement(1621982..1622404) Psychrobacter arcticus 273-4 3515301 YP_264627.1 CDS Psyc_1345 NC_007204.1 1622551 1622889 R endoribonuclease complement(1622551..1622889) Psychrobacter arcticus 273-4 3515302 YP_264628.1 CDS Psyc_1346 NC_007204.1 1622932 1624179 R Substrate unknown. Aligns to DAO family HMM and DAO COG.; D-amino acid oxidase complement(1622932..1624179) Psychrobacter arcticus 273-4 3515303 YP_264629.1 CDS Psyc_1347 NC_007204.1 1624474 1624938 R rep helicase, single-stranded DNA-dependent ATPase protein complement(1624474..1624938) Psychrobacter arcticus 273-4 3515304 YP_264630.1 CDS Psyc_1348 NC_007204.1 1625133 1626386 R 12 predicted transmembrane helices; hypothetical protein complement(1625133..1626386) Psychrobacter arcticus 273-4 3515305 YP_264631.1 CDS Psyc_1349 NC_007204.1 1626571 1626810 D RBS found; hypothetical protein 1626571..1626810 Psychrobacter arcticus 273-4 3515306 YP_264632.1 CDS Psyc_1350 NC_007204.1 1626894 1628384 R aldehyde dehydrogenase complement(1626894..1628384) Psychrobacter arcticus 273-4 3515307 YP_264633.1 CDS Psyc_1351 NC_007204.1 1628662 1629300 D TetR family transcriptional regulator 1628662..1629300 Psychrobacter arcticus 273-4 3515308 YP_264634.1 CDS Psyc_1352 NC_007204.1 1629640 1630872 D iron-containing alcohol dehydrogenase 1629640..1630872 Psychrobacter arcticus 273-4 3515309 YP_264635.1 CDS nonF NC_007204.1 1630971 1631648 D ThiJ/PfpI family protein 1630971..1631648 Psychrobacter arcticus 273-4 3515310 YP_264636.1 CDS Psyc_1354 NC_007204.1 1631785 1631988 D No RBS found.; hypothetical protein 1631785..1631988 Psychrobacter arcticus 273-4 3515311 YP_264637.1 CDS Psyc_1355 NC_007204.1 1632150 1632401 R Predicted by generation, glimmer and critica.; hypothetical protein complement(1632150..1632401) Psychrobacter arcticus 273-4 3515312 YP_264638.1 CDS Psyc_1356 NC_007204.1 1632604 1634220 D MFS drug efflux transporter RmrB 1632604..1634220 Psychrobacter arcticus 273-4 3515313 YP_264639.1 CDS Psyc_1357 NC_007204.1 1634322 1635725 D multidrug efflux pump (emrA) 1634322..1635725 Psychrobacter arcticus 273-4 3515314 YP_264640.1 CDS pdxH NC_007204.1 1635916 1636566 R pyridoxamine 5'-phosphate oxidase complement(1635916..1636566) Psychrobacter arcticus 273-4 3515315 YP_264641.1 CDS glmM NC_007204.1 1636605 1637972 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(1636605..1637972) Psychrobacter arcticus 273-4 3515316 YP_264642.1 CDS guaB NC_007204.1 1638223 1639695 R Two CBS domains are found in this ORF.; inosine-5'-monophosphate dehydrogenase complement(1638223..1639695) Psychrobacter arcticus 273-4 3515317 YP_264643.1 CDS cysS NC_007204.1 1640108 1641574 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(1640108..1641574) Psychrobacter arcticus 273-4 3515318 YP_264644.1 CDS btuR NC_007204.1 1641936 1642580 D ATP:cob(I)alamin adenosyltransferase 1641936..1642580 Psychrobacter arcticus 273-4 3515319 YP_264645.1 CDS Psyc_1363 NC_007204.1 1642683 1643576 R not a membrane binding inner protein despite the domain presence because these proteins contain transmembrane helices to either side of domain; hypothetical protein complement(1642683..1643576) Psychrobacter arcticus 273-4 3515320 YP_264646.1 CDS Psyc_1364 NC_007204.1 1643973 1644701 D glycerophosphoryl diester phosphodiesterase 1643973..1644701 Psychrobacter arcticus 273-4 3515321 YP_264647.1 CDS Psyc_1365 NC_007204.1 1644926 1646329 D Delta-9 acyl-phospholipid desaturase 1644926..1646329 Psychrobacter arcticus 273-4 3515322 YP_264648.1 CDS Psyc_1366 NC_007204.1 1646735 1648207 D hypothetical protein 1646735..1648207 Psychrobacter arcticus 273-4 3515323 YP_264649.1 CDS maeB NC_007204.1 1648650 1650989 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 1648650..1650989 Psychrobacter arcticus 273-4 3515324 YP_264650.1 CDS cca NC_007204.1 1651145 1652332 D tRNA nucleotidyltransferase 1651145..1652332 Psychrobacter arcticus 273-4 3515325 YP_264651.1 CDS Psyc_1369 NC_007204.1 1652394 1653197 D Involved in pteridine salvage and antifolate resistance; pteridine reductase 1652394..1653197 Psychrobacter arcticus 273-4 3515326 YP_264652.1 CDS Psyc_1370 NC_007204.1 1653540 1654811 D Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment.; phage integrase 1653540..1654811 Psychrobacter arcticus 273-4 3515328 YP_264653.1 CDS Psyc_1371 NC_007204.1 1655016 1655477 R RBS found.; hypothetical protein complement(1655016..1655477) Psychrobacter arcticus 273-4 3515329 YP_264654.1 CDS Psyc_1372 NC_007204.1 1655467 1657236 R RBS found. Aligns to ThiF family domain.; hypothetical protein complement(1655467..1657236) Psychrobacter arcticus 273-4 3515330 YP_264655.1 CDS Psyc_1373 NC_007204.1 1657236 1658540 R hypothetical protein complement(1657236..1658540) Psychrobacter arcticus 273-4 3515331 YP_264656.1 CDS Psyc_1374 NC_007204.1 1658537 1659637 R Patatin is a phospholipase.; patatin-related protein complement(1658537..1659637) Psychrobacter arcticus 273-4 3515332 YP_264657.1 CDS Psyc_1375 NC_007204.1 1659795 1660544 R transposase, ISSod6 complement(1659795..1660544) Psychrobacter arcticus 273-4 3515333 YP_264658.1 CDS Psyc_1376 NC_007204.1 1660634 1662676 R RBS found.; hypothetical protein complement(1660634..1662676) Psychrobacter arcticus 273-4 3515334 YP_264659.1 CDS Psyc_1377 NC_007204.1 1662694 1664190 R DUF262 domain; hypothetical protein complement(1662694..1664190) Psychrobacter arcticus 273-4 3515335 YP_264660.1 CDS Psyc_1378 NC_007204.1 1664331 1664957 R Predicted by generation, glimmer and critica. strong rbs; hypothetical protein complement(1664331..1664957) Psychrobacter arcticus 273-4 3515336 YP_264661.1 CDS Psyc_1379 NC_007204.1 1665053 1665493 R RBS found. Aligns to COG5579: Uncharacterized conserved protein.; hypothetical protein complement(1665053..1665493) Psychrobacter arcticus 273-4 3515337 YP_264662.1 CDS Psyc_1380 NC_007204.1 1665583 1666260 R Predicted by generation, glimmer and critica. strong rbs; hypothetical protein complement(1665583..1666260) Psychrobacter arcticus 273-4 3515338 YP_264663.1 CDS Psyc_1381 NC_007204.1 1666288 1667379 R contains p-loop ATP binding domain; transcription factor complement(1666288..1667379) Psychrobacter arcticus 273-4 3515339 YP_264664.1 CDS Psyc_1382 NC_007204.1 1667432 1668289 R serine/threonine phosphatase complement(1667432..1668289) Psychrobacter arcticus 273-4 3515340 YP_264665.1 CDS Psyc_1383 NC_007204.1 1668805 1672740 D contains ATP/GTP binding Ploop; hypothetical protein 1668805..1672740 Psychrobacter arcticus 273-4 3515341 YP_264666.1 CDS Psyc_1384 NC_007204.1 1672737 1673360 D hypothetical protein 1672737..1673360 Psychrobacter arcticus 273-4 3515342 YP_264667.1 CDS Psyc_1385 NC_007204.1 1673357 1674685 D RBS found; hypothetical protein 1673357..1674685 Psychrobacter arcticus 273-4 3515343 YP_264668.1 CDS Psyc_1386 NC_007204.1 1674658 1675569 D RBS found; hypothetical protein 1674658..1675569 Psychrobacter arcticus 273-4 3515344 YP_264669.1 CDS Psyc_1387 NC_007204.1 1675747 1677429 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(1675747..1677429) Psychrobacter arcticus 273-4 3515345 YP_264670.1 CDS sgaA NC_007204.1 1678189 1679364 D serine-glyoxylate aminotransferase 1678189..1679364 Psychrobacter arcticus 273-4 3515346 YP_264671.1 CDS tdcB NC_007204.1 1679444 1680424 D threonine dehydratase 1679444..1680424 Psychrobacter arcticus 273-4 3515347 YP_264672.1 CDS dhaa NC_007204.1 1680540 1681691 D Citation: Appl Microbiol Biotechnol. 2003 Jul;62(1):53-60; D-3-hydroxyaspartate aldolase 1680540..1681691 Psychrobacter arcticus 273-4 3515348 YP_264673.1 CDS ocd NC_007204.1 1681816 1682817 D ornithine cyclodeaminase 1681816..1682817 Psychrobacter arcticus 273-4 3515349 YP_264674.1 CDS Psyc_1392 NC_007204.1 1683261 1685429 D pyridine nucleotide-disulfide oxidoreductase 1683261..1685429 Psychrobacter arcticus 273-4 3515350 YP_264675.1 CDS Psyc_1393 NC_007204.1 1685585 1686403 D sterol desaturase 1685585..1686403 Psychrobacter arcticus 273-4 3515351 YP_264676.1 CDS Psyc_1394 NC_007204.1 1686635 1687189 D hypothetical protein 1686635..1687189 Psychrobacter arcticus 273-4 3515352 YP_264677.1 CDS Psyc_1395 NC_007204.1 1687382 1687990 R bind DNA via a helix-turn-helix (HTH) motif. possible acrR subfamily but weak sequence similarity.; TetR family transcriptional regulator complement(1687382..1687990) Psychrobacter arcticus 273-4 3515353 YP_264678.1 CDS Psyc_1396 NC_007204.1 1688186 1688881 D haloacid dehalogenase 1688186..1688881 Psychrobacter arcticus 273-4 3515354 YP_264679.1 CDS yaiL NC_007204.1 1689070 1689603 D hypothetical protein 1689070..1689603 Psychrobacter arcticus 273-4 3515355 YP_264680.1 CDS fadA4 NC_007204.1 1690487 1691695 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1690487..1691695 Psychrobacter arcticus 273-4 3515356 YP_264681.1 CDS Psyc_1399 NC_007204.1 1691898 1694069 D 3-hydroxyacyl-CoA dehydrogenase 1691898..1694069 Psychrobacter arcticus 273-4 3515357 YP_264682.1 CDS Psyc_1400 NC_007204.1 1694062 1695123 D Citation: A new family of CoA-transferases. Heider J. FEBS Lett 2001;509:345-349.; CoA-transferase family III protein 1694062..1695123 Psychrobacter arcticus 273-4 3515358 YP_264683.1 CDS Psyc_1401 NC_007204.1 1695780 1696502 D permease transmembrane protein 1695780..1696502 Psychrobacter arcticus 273-4 3515359 YP_264684.1 CDS Psyc_1402 NC_007204.1 1696785 1697495 D pirin 1696785..1697495 Psychrobacter arcticus 273-4 3515360 YP_264685.1 CDS tyrB NC_007204.1 1697731 1698927 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1697731..1698927 Psychrobacter arcticus 273-4 3515361 YP_264686.1 CDS queA NC_007204.1 1699158 1700369 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1699158..1700369 Psychrobacter arcticus 273-4 3515362 YP_264687.1 CDS Psyc_1405 NC_007204.1 1700490 1702304 D LysM domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.994) with cleavage site probability 0.849 at residue 36; hypothetical protein 1700490..1702304 Psychrobacter arcticus 273-4 3515363 YP_264688.1 CDS Psyc_1406 NC_007204.1 1702355 1703950 D contains TPR repeat know to be involved in protein-protein interaction; hypothetical protein 1702355..1703950 Psychrobacter arcticus 273-4 3515364 YP_264689.1 CDS ansA NC_007204.1 1704113 1705198 D type I L-asparaginase 1704113..1705198 Psychrobacter arcticus 273-4 3515365 YP_264690.1 CDS truA NC_007204.1 1705244 1706074 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1705244..1706074 Psychrobacter arcticus 273-4 3515366 YP_264691.1 CDS infA NC_007204.1 1706187 1706420 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1706187..1706420 Psychrobacter arcticus 273-4 3515367 YP_264692.1 CDS leuB NC_007204.1 1706719 1707822 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(1706719..1707822) Psychrobacter arcticus 273-4 3515368 YP_264693.1 CDS Psyc_1411 NC_007204.1 1707907 1708644 R Predicted by generation, glimmer and critica. 1 transmembrane helice, 23 base cleavage site predicted; hypothetical protein complement(1707907..1708644) Psychrobacter arcticus 273-4 3515369 YP_264694.1 CDS leuD NC_007204.1 1708818 1709468 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(1708818..1709468) Psychrobacter arcticus 273-4 3515370 YP_264695.1 CDS leuC NC_007204.1 1709516 1710934 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(1709516..1710934) Psychrobacter arcticus 273-4 3515371 YP_264696.1 CDS lysR NC_007204.1 1711249 1712121 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.701) with cleavage site probability 0.650 at residue 22; LysR family transcriptional regulator 1711249..1712121 Psychrobacter arcticus 273-4 3515372 YP_264697.1 CDS Psyc_1415 NC_007204.1 1712659 1714158 D SSS family Na(+)/proline symporter 1712659..1714158 Psychrobacter arcticus 273-4 3515373 YP_264698.1 CDS Psyc_1416 NC_007204.1 1714247 1715461 R outer membrane protein complement(1714247..1715461) Psychrobacter arcticus 273-4 3515374 YP_264699.1 CDS Psyc_1417 NC_007204.1 1715842 1717002 R FadL family outer membrane protein complement(1715842..1717002) Psychrobacter arcticus 273-4 3515375 YP_264700.1 CDS Psyc_1418 NC_007204.1 1717224 1717505 R Predicted by generation, glimmer and critica. 3 site rbs; hypothetical protein complement(1717224..1717505) Psychrobacter arcticus 273-4 3515376 YP_264701.1 CDS Psyc_1419 NC_007204.1 1717701 1719647 D ABC transporter:AAA ATPase 1717701..1719647 Psychrobacter arcticus 273-4 3515377 YP_264702.1 CDS Psyc_1420 NC_007204.1 1720079 1720663 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.906) with cleavage site probability 0.392 at residue 32; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1720079..1720663 Psychrobacter arcticus 273-4 3515378 YP_264703.1 CDS Psyc_1421 NC_007204.1 1720686 1721891 D cytochrome b, b6 subunit 1720686..1721891 Psychrobacter arcticus 273-4 3515379 YP_264704.1 CDS Psyc_1422 NC_007204.1 1721891 1722604 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 at residue 27; ubiquinol cytochrome c1 reductase 1721891..1722604 Psychrobacter arcticus 273-4 3515380 YP_264705.1 CDS sspA NC_007204.1 1722800 1723414 D -adjacent or2766 is sspB, possible evidence supporting sspA assignment for this protein; Citation: Hansen A.M., Lehnherr H., Wang X., Mobley V., Jin D.J. (2003) Escherichia coli SspA is a transcription activator for bacteriophage P1 late genes. Mol Microbiol 48:1621-1631.; stringent starvation protein A 1722800..1723414 Psychrobacter arcticus 273-4 3515381 YP_264706.1 CDS sspB NC_007204.1 1723564 1724004 D ClpXP protease specificity-enhancing factor 1723564..1724004 Psychrobacter arcticus 273-4 3515382 YP_264707.1 CDS dcd NC_007204.1 1724093 1724668 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(1724093..1724668) Psychrobacter arcticus 273-4 3515383 YP_264708.1 CDS Psyc_1426 NC_007204.1 1725154 1726380 R ATP-binding protein complement(1725154..1726380) Psychrobacter arcticus 273-4 3515384 YP_264709.1 CDS Psyc_1427 NC_007204.1 1726784 1727665 D There are 9 addittional ORFs identical to this one.; IS4 family transposase 1726784..1727665 Psychrobacter arcticus 273-4 3515385 YP_264710.1 CDS Psyc_1428 NC_007204.1 1727710 1728510 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(1727710..1728510) Psychrobacter arcticus 273-4 3515386 YP_264711.1 CDS Psyc_1429 NC_007204.1 1728589 1729218 R butyryl-CoA:acetate CoA transferase complement(1728589..1729218) Psychrobacter arcticus 273-4 3515387 YP_264712.1 CDS lpsI NC_007204.1 1729295 1730008 R coenzyme A transferase complement(1729295..1730008) Psychrobacter arcticus 273-4 3515388 YP_264713.1 CDS Psyc_1431 NC_007204.1 1730274 1731689 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.911) with cleavage site probability 0.549 at residue 22; GntP family transporter 1730274..1731689 Psychrobacter arcticus 273-4 3515389 YP_264714.1 CDS metG NC_007204.1 1731996 1734098 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1731996..1734098 Psychrobacter arcticus 273-4 3515390 YP_264715.1 CDS Psyc_1433 NC_007204.1 1734213 1734650 R Predicted by generation, glimmer and critica. Predicted signalP cleavage site. strong rbs; hypothetical protein complement(1734213..1734650) Psychrobacter arcticus 273-4 3515391 YP_264716.1 CDS Psyc_1434 NC_007204.1 1735049 1736098 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.523 at residue 27; ABC transporter substrate-binding protein 1735049..1736098 Psychrobacter arcticus 273-4 3515392 YP_264717.1 CDS Psyc_1435 NC_007204.1 1736273 1737298 D ABC transporter substrate-binding protein 1736273..1737298 Psychrobacter arcticus 273-4 3515393 YP_264718.1 CDS Psyc_1436 NC_007204.1 1737634 1738533 D ABC transporter inner membrane subunit 1737634..1738533 Psychrobacter arcticus 273-4 3515394 YP_264719.1 CDS Psyc_1437 NC_007204.1 1738565 1739359 D ABC transporter ATPase 1738565..1739359 Psychrobacter arcticus 273-4 3515395 YP_264720.1 CDS Psyc_1438 NC_007204.1 1739370 1739984 R Response regulatory domain found N-terminal to a DNA binding effector domain of LuxR family; Citation: Pao G.M. , Saier M.H. Response regulators of bacterial signal transduction systems: selective domain shuffling during evolution. J. Mol. Evol. 40: 136- 154 (1995) [PubMed: 7699720 ]; LuxR family transcriptional regulator complement(1739370..1739984) Psychrobacter arcticus 273-4 3515396 YP_264721.1 CDS ttrS NC_007204.1 1739988 1742129 R Signal transduction histidine kinase sensor complement(1739988..1742129) Psychrobacter arcticus 273-4 3515397 YP_264722.1 CDS Psyc_1440 NC_007204.1 1742344 1743744 D cytochrome c, class I 1742344..1743744 Psychrobacter arcticus 273-4 3515398 YP_264723.1 CDS Psyc_1441 NC_007204.1 1743744 1744679 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.631) with cleavage site probability 0.394 at residue 34; cytochrome c 1743744..1744679 Psychrobacter arcticus 273-4 3515399 YP_264724.1 CDS Psyc_1442 NC_007204.1 1744865 1747258 D formate dehydrogenase 1744865..1747258 Psychrobacter arcticus 273-4 3515400 YP_264725.1 CDS fdhD NC_007204.1 1747369 1748379 D formate dehydrogenase accessory protein FdhD 1747369..1748379 Psychrobacter arcticus 273-4 3515401 YP_264726.1 CDS Psyc_1444 NC_007204.1 1748905 1749231 D transposase 1748905..1749231 Psychrobacter arcticus 273-4 3515402 YP_264727.1 CDS Psyc_1445 NC_007204.1 1750440 1750943 D hypothetical protein 1750440..1750943 Psychrobacter arcticus 273-4 3515405 YP_264728.1 CDS malT NC_007204.1 1751547 1754312 D evidence for ATP dependence from binding site, luxR family binding site at C-terminus. Closest match to MalT due to size of protein.; LuxR family transcriptional regulator 1751547..1754312 Psychrobacter arcticus 273-4 3515406 YP_264729.1 CDS Psyc_1447 NC_007204.1 1754457 1755248 R RBS found.; hypothetical protein complement(1754457..1755248) Psychrobacter arcticus 273-4 3515407 YP_264730.1 CDS Psyc_1448 NC_007204.1 1755408 1757714 R acetone carboxylase subunit alpha complement(1755408..1757714) Psychrobacter arcticus 273-4 3515408 YP_264731.1 CDS Psyc_1449 NC_007204.1 1757762 1759900 R acetone carboxylase subunit beta complement(1757762..1759900) Psychrobacter arcticus 273-4 3515409 YP_264732.1 CDS acxC NC_007204.1 1759914 1760375 R Citation: Miriam K. Sluis and Scott A., Proc. Natl. Acad. Sci. USA. 1997 August 5; 94 (16): 8456-8461; acetone carboxylase subunit gamma complement(1759914..1760375) Psychrobacter arcticus 273-4 3515410 YP_264733.1 CDS Psyc_1451 NC_007204.1 1760421 1762340 R hydantoinase/oxoprolinase family protein complement(1760421..1762340) Psychrobacter arcticus 273-4 3515411 YP_264734.1 CDS Psyc_1452 NC_007204.1 1762694 1763005 D contains fis type helix turn helix motif suggesting nucleic acid binding; IS1329/IS3/IS911 transposase 1762694..1763005 Psychrobacter arcticus 273-4 3515412 YP_264735.1 CDS Psyc_1453 NC_007204.1 1763068 1763877 D Integrase, catalytic domain; transposase orfAB 1763068..1763877 Psychrobacter arcticus 273-4 3515413 YP_264736.1 CDS Psyc_1454 NC_007204.1 1764700 1765371 R phospholipase/carboxylesterase family protein complement(1764700..1765371) Psychrobacter arcticus 273-4 3515415 YP_264737.1 CDS aroC NC_007204.1 1765574 1766677 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1765574..1766677) Psychrobacter arcticus 273-4 3515416 YP_264738.1 CDS hemK NC_007204.1 1766870 1768045 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(1766870..1768045) Psychrobacter arcticus 273-4 3515417 YP_264739.1 CDS Psyc_1457 NC_007204.1 1768415 1769836 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.997) with cleavage site probability 0.995 at residue 48; ErfK/YbiS/YcfS/YnhG protein family protein 1768415..1769836 Psychrobacter arcticus 273-4 3515418 YP_264740.1 CDS Psyc_1458 NC_007204.1 1769984 1770502 D IS3/IS911 family transposase orfA 1769984..1770502 Psychrobacter arcticus 273-4 3515419 YP_264741.1 CDS Psyc_1459 NC_007204.1 1770544 1771329 D IS3 family transposase 1770544..1771329 Psychrobacter arcticus 273-4 3515420 YP_264742.1 CDS alaS NC_007204.1 1772104 1774776 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1772104..1774776 Psychrobacter arcticus 273-4 3515421 YP_264743.1 CDS lysC NC_007204.1 1775245 1776531 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1775245..1776531 Psychrobacter arcticus 273-4 3515422 YP_264744.1 CDS csrA NC_007204.1 1776935 1777180 D affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 1776935..1777180 Psychrobacter arcticus 273-4 3515423 YP_264745.1 CDS Psyc_1463 NC_007204.1 1777266 1777640 D hypothetical protein 1777266..1777640 Psychrobacter arcticus 273-4 3515424 YP_264746.1 CDS Psyc_1464 NC_007204.1 1777760 1778071 R Aligns to COG3139: Uncharacterized protein; hypothetical protein complement(1777760..1778071) Psychrobacter arcticus 273-4 3515425 YP_264747.1 CDS ppnK NC_007204.1 1778127 1779146 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(1778127..1779146) Psychrobacter arcticus 273-4 3515426 YP_264748.1 CDS Psyc_1466 NC_007204.1 1779392 1780114 D contains 7 predicted transmembrane regions; hypothetical protein 1779392..1780114 Psychrobacter arcticus 273-4 3515427 YP_264749.1 CDS Psyc_1467 NC_007204.1 1780205 1783057 R heavy metal efflux P-type ATPase complement(1780205..1783057) Psychrobacter arcticus 273-4 3515428 YP_264750.1 CDS mrcB NC_007204.1 1783417 1785900 D penicillin-binding protein transpeptidase domain-containing protein 1783417..1785900 Psychrobacter arcticus 273-4 3515429 YP_264751.1 CDS Psyc_1469 NC_007204.1 1786000 1786875 D protein interacting Tpr repeat domain; Citation: ieter P. , Tugendreich S. , Lamb J.R. Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem. Sci. 20: 257- 259 (1995) [PubMed: 7667876 ]; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.989) with cleavage site probability 0.571 at residue 44; hypothetical protein 1786000..1786875 Psychrobacter arcticus 273-4 3515430 YP_264752.1 CDS prmA NC_007204.1 1786992 1787918 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 1786992..1787918 Psychrobacter arcticus 273-4 3515431 YP_264753.1 CDS fis NC_007204.1 1788227 1788586 D helix-turn-helix; Fis family transcriptional regulator 1788227..1788586 Psychrobacter arcticus 273-4 3515432 YP_264754.1 CDS purH NC_007204.1 1788784 1790364 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1788784..1790364 Psychrobacter arcticus 273-4 3515433 YP_264755.1 CDS Psyc_1473 NC_007204.1 1790558 1792432 R PpiC-type peptidyl-prolyl cis-trans isomerase complement(1790558..1792432) Psychrobacter arcticus 273-4 3515434 YP_264756.1 CDS hupB NC_007204.1 1792826 1793098 R DNA-binding protein HU-beta complement(1792826..1793098) Psychrobacter arcticus 273-4 3515435 YP_264757.1 CDS Psyc_1475 NC_007204.1 1793745 1794392 D RBS found. Contains two predicted transmembrane domains.; hypothetical protein 1793745..1794392 Psychrobacter arcticus 273-4 3515436 YP_264758.1 CDS Psyc_1476 NC_007204.1 1794791 1795303 D These are small proteins of 12 to 18 kD which seem to contain a signal sequence, and may represent a family of probable transcriptional regulators.; Winged helix DNA-binding; BadM/Rrf2 family transcriptional regulator 1794791..1795303 Psychrobacter arcticus 273-4 3515437 YP_264759.1 CDS Psyc_1477 NC_007204.1 1795300 1796526 D cysteine desulfurase 1795300..1796526 Psychrobacter arcticus 273-4 3515438 YP_264760.1 CDS nifU NC_007204.1 1796739 1797125 D N-terminal only; scaffold protein 1796739..1797125 Psychrobacter arcticus 273-4 3515439 YP_264761.1 CDS Psyc_1479 NC_007204.1 1797344 1797664 D HesB/YadR/YfhF family protein 1797344..1797664 Psychrobacter arcticus 273-4 3515440 YP_264762.1 CDS hscB NC_007204.1 1797725 1798306 D co-chaperone Hsc20 heat shock proteins related 1797725..1798306 Psychrobacter arcticus 273-4 3515441 YP_264763.1 CDS hscA NC_007204.1 1798560 1800437 D involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 1798560..1800437 Psychrobacter arcticus 273-4 3515442 YP_264764.1 CDS Psyc_1482 NC_007204.1 1800535 1800873 D ferredoxin, 2Fe-2S type 1800535..1800873 Psychrobacter arcticus 273-4 3515443 YP_264765.1 CDS Psyc_1483 NC_007204.1 1801251 1801682 R histidine triad (HIT) family protein complement(1801251..1801682) Psychrobacter arcticus 273-4 3515444 YP_264766.1 CDS mfd NC_007204.1 1801921 1805652 R DExH/D-box domain found in ATPases that have been proposed to mediate RNA structural rearrangements in a variety of cellular processes, including nuclear pre-mRNA splicing, ribosome assembly, protein synthesis, nuclear transport, and RNA degradation .; Citation: Linder P. , Schmid S.R. D-E-A-D protein family of RNA helicases. Mol. Microbiol. 6: 283- 292 (1992) [PubMed: 1552844 ]; transcription-repair coupling factor complement(1801921..1805652) Psychrobacter arcticus 273-4 3515445 YP_264767.1 CDS menG NC_007204.1 1805883 1806416 R regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA complement(1805883..1806416) Psychrobacter arcticus 273-4 3515446 YP_264768.1 CDS Psyc_1486 NC_007204.1 1806524 1807225 R oxidoreductase complement(1806524..1807225) Psychrobacter arcticus 273-4 3515447 YP_264769.1 CDS rpsT NC_007204.1 1807754 1808020 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1807754..1808020 Psychrobacter arcticus 273-4 3515448 YP_264770.1 CDS Psyc_1488 NC_007204.1 1808149 1808985 R Predicted by generation, glimmer and critica. 3 base RBS.; hypothetical protein complement(1808149..1808985) Psychrobacter arcticus 273-4 3515449 YP_264771.1 CDS Psyc_1489 NC_007204.1 1809306 1810118 R metallo-phosphoesterase complement(1809306..1810118) Psychrobacter arcticus 273-4 3515450 YP_264772.1 CDS Psyc_1490 NC_007204.1 1810294 1811175 D There are 9 addittional ORFs identical to this one.; IS4 family transposase 1810294..1811175 Psychrobacter arcticus 273-4 3515451 YP_264773.1 CDS pyrF NC_007204.1 1811238 1811936 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(1811238..1811936) Psychrobacter arcticus 273-4 3515452 YP_264774.1 CDS Psyc_1492 NC_007204.1 1812012 1812440 R Predicted by generation, glimmer and critica. Good rbs. 2 transmembrane helices and predicted signal P cleavage site; hypothetical protein complement(1812012..1812440) Psychrobacter arcticus 273-4 3515453 YP_264775.1 CDS Psyc_1493 NC_007204.1 1812600 1812848 R histone-like DNA-binding protein complement(1812600..1812848) Psychrobacter arcticus 273-4 3515454 YP_264776.1 CDS rpsA NC_007204.1 1813226 1814917 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(1813226..1814917) Psychrobacter arcticus 273-4 3515455 YP_264777.1 CDS cmkA NC_007204.1 1815228 1815983 R cytidylate kinase complement(1815228..1815983) Psychrobacter arcticus 273-4 3515456 YP_264778.1 CDS cumB NC_007204.1 1816145 1816732 R Contains family-specific zinc binding domain; tRNA-adenosine deaminase complement(1816145..1816732) Psychrobacter arcticus 273-4 3515457 YP_264779.1 CDS ung NC_007204.1 1816733 1817476 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(1816733..1817476) Psychrobacter arcticus 273-4 3515458 YP_264780.1 CDS clpA NC_007204.1 1817787 1820336 R ATP-dependent Clp protease ATP-binding subunit ClpA complement(1817787..1820336) Psychrobacter arcticus 273-4 3515459 YP_264781.1 CDS clpS NC_007204.1 1821004 1821420 R Contains ClpS HMM (formerly DUF174). This orf occurs immediately upstream of clpA.; ATP-dependent Clp protease adapter protein complement(1821004..1821420) Psychrobacter arcticus 273-4 3515460 YP_264782.1 CDS Psyc_1500 NC_007204.1 1821538 1822422 R 1 predicted transmembrane domain. Predicted by glimmer, critica and generation, good rbs; hypothetical protein complement(1821538..1822422) Psychrobacter arcticus 273-4 3515461 YP_264783.1 CDS argC NC_007204.1 1822526 1823593 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(1822526..1823593) Psychrobacter arcticus 273-4 3515462 YP_264784.1 CDS hemE NC_007204.1 1823686 1824822 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(1823686..1824822) Psychrobacter arcticus 273-4 3515463 YP_264785.1 CDS proB NC_007204.1 1824943 1826115 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(1824943..1826115) Psychrobacter arcticus 273-4 3515464 YP_264786.1 CDS obgE NC_007204.1 1826188 1827405 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(1826188..1827405) Psychrobacter arcticus 273-4 3515465 YP_264787.1 CDS gapA NC_007204.1 1827673 1829118 R catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase complement(1827673..1829118) Psychrobacter arcticus 273-4 3515466 YP_264788.1 CDS Psyc_1506 NC_007204.1 1829741 1830478 R hypothetical protein complement(1829741..1830478) Psychrobacter arcticus 273-4 3515467 YP_264789.1 CDS Psyc_1507 NC_007204.1 1830988 1832070 R NUDIX hydrolase complement(1830988..1832070) Psychrobacter arcticus 273-4 3515468 YP_264790.1 CDS Psyc_1508 NC_007204.1 1832207 1832458 D No RBS found.; hypothetical protein 1832207..1832458 Psychrobacter arcticus 273-4 3515469 YP_264791.1 CDS Psyc_1509 NC_007204.1 1832731 1837725 R RBS found.; hypothetical protein complement(1832731..1837725) Psychrobacter arcticus 273-4 3515470 YP_264792.1 CDS Psyc_1510 NC_007204.1 1837804 1840941 R hypothetical protein complement(1837804..1840941) Psychrobacter arcticus 273-4 3515471 YP_264793.1 CDS Psyc_1511 NC_007204.1 1841434 1842774 D major facilitator transporter 1841434..1842774 Psychrobacter arcticus 273-4 3515472 YP_264794.1 CDS Psyc_1512 NC_007204.1 1842969 1843613 D Ubiquinone biosyntheis proteins are central metabolic regulatory proteins and the side chain of ubiquinones play a significant role in respiration; ubiquinone biosyntheis protein COQ7 1842969..1843613 Psychrobacter arcticus 273-4 3515473 YP_264795.1 CDS Psyc_1513 NC_007204.1 1843839 1844978 D alanine rich region at N-terminus suggests membrane glycoprotein as do blast hits; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 1.000 at residue 35; hypothetical protein 1843839..1844978 Psychrobacter arcticus 273-4 3515474 YP_264796.1 CDS Psyc_1514 NC_007204.1 1845245 1847851 D serine dependent catalytic site present; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.343 at residue 40; hypothetical protein 1845245..1847851 Psychrobacter arcticus 273-4 3515475 YP_264797.1 CDS cydA NC_007204.1 1848473 1849996 D cytochrome bd ubiquinol oxidase, subunit I 1848473..1849996 Psychrobacter arcticus 273-4 3515476 YP_264798.1 CDS cydB NC_007204.1 1849996 1851012 D cytochrome bd ubiquinol oxidase subunit II 1849996..1851012 Psychrobacter arcticus 273-4 3515477 YP_264799.1 CDS Psyc_1517 NC_007204.1 1851432 1852172 R eIF-2Bgamma; eIF-2Bepsilon; translation initiation factor 2B gamma and epsilon subunits; nucleotidyl transferase complement(1851432..1852172) Psychrobacter arcticus 273-4 3515478 YP_264800.1 CDS Psyc_1518 NC_007204.1 1852227 1853366 R Aligns to COG3178: Predicted phosphotransferase; hypothetical protein complement(1852227..1853366) Psychrobacter arcticus 273-4 3515479 YP_264801.1 CDS ostA NC_007204.1 1853684 1856422 D PFAM data suggest two domain structure with a MP dehydrogenase/GMP reductase domain in the 5' end; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.982 at residue 28; organic solvent tolerance protein 1853684..1856422 Psychrobacter arcticus 273-4 3515480 YP_264802.1 CDS Psyc_1520 NC_007204.1 1856615 1858012 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 at residue 32; peptidyl-prolyl isomerase 1856615..1858012 Psychrobacter arcticus 273-4 3515481 YP_264803.1 CDS Psyc_1521 NC_007204.1 1858467 1859558 D NADH-dependent flavin oxidoreductase 1858467..1859558 Psychrobacter arcticus 273-4 3515482 YP_264804.1 CDS Psyc_1522 NC_007204.1 1860238 1861356 R hypothetical protein complement(1860238..1861356) Psychrobacter arcticus 273-4 3515483 YP_264805.1 CDS asd NC_007204.1 1861826 1862959 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1861826..1862959 Psychrobacter arcticus 273-4 3515484 YP_264806.1 CDS tgt NC_007204.1 1863438 1864589 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1863438..1864589 Psychrobacter arcticus 273-4 3515485 YP_264807.1 CDS Psyc_1525 NC_007204.1 1864709 1866061 R sodium-dependent transporter complement(1864709..1866061) Psychrobacter arcticus 273-4 3515486 YP_264808.1 CDS lpxA NC_007204.1 1866370 1867149 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(1866370..1867149) Psychrobacter arcticus 273-4 3515487 YP_264809.1 CDS fabZ NC_007204.1 1867326 1867835 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(1867326..1867835) Psychrobacter arcticus 273-4 3515488 YP_264810.1 CDS lpxD NC_007204.1 1867949 1868986 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(1867949..1868986) Psychrobacter arcticus 273-4 3515489 YP_264811.1 CDS Psyc_1529 NC_007204.1 1869116 1871527 R surface antigen (D15) complement(1869116..1871527) Psychrobacter arcticus 273-4 3515490 YP_264812.1 CDS Psyc_1530 NC_007204.1 1871791 1873164 R peptidase RseP complement(1871791..1873164) Psychrobacter arcticus 273-4 3515491 YP_264813.1 CDS dxr NC_007204.1 1873245 1874453 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(1873245..1874453) Psychrobacter arcticus 273-4 3515492 YP_264814.1 CDS cdsA NC_007204.1 1874705 1875514 R phosphatidate cytidylyltransferase complement(1874705..1875514) Psychrobacter arcticus 273-4 3515493 YP_264815.1 CDS uppS NC_007204.1 1875645 1876403 R undecaprenyl pyrophosphate synthetase complement(1875645..1876403) Psychrobacter arcticus 273-4 3515494 YP_264816.1 CDS frr NC_007204.1 1876646 1877200 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(1876646..1877200) Psychrobacter arcticus 273-4 3515495 YP_264817.1 CDS pyrH NC_007204.1 1877328 1878053 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(1877328..1878053) Psychrobacter arcticus 273-4 3515496 YP_264818.1 CDS rimO NC_007204.1 1878243 1879820 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase complement(1878243..1879820) Psychrobacter arcticus 273-4 3515497 YP_264819.1 CDS ntrB NC_007204.1 1880091 1881479 D Signal transduction histidine kinase sensor 1880091..1881479 Psychrobacter arcticus 273-4 3515498 YP_264820.1 CDS ntrC NC_007204.1 1881521 1883260 D probable nitrogen regulation; response regulator receiver protein 1881521..1883260 Psychrobacter arcticus 273-4 3515499 YP_264821.1 CDS ppkA NC_007204.1 1883793 1884785 R protein kinase:Serine/threonine protein kinase complement(1883793..1884785) Psychrobacter arcticus 273-4 3515501 YP_264822.1 CDS Psyc_1540 NC_007204.1 1884847 1885833 D ATP binding P-loop; hypothetical protein 1884847..1885833 Psychrobacter arcticus 273-4 3515502 YP_264823.1 CDS Psyc_1541 NC_007204.1 1885892 1886176 R predicted by generation, critica and glimmer, 4 base rbs; hypothetical protein complement(1885892..1886176) Psychrobacter arcticus 273-4 3515503 YP_264824.1 CDS Psyc_1542 NC_007204.1 1886263 1886931 R glutathione S-transferase complement(1886263..1886931) Psychrobacter arcticus 273-4 3515504 YP_264825.1 CDS gyrA NC_007204.1 1887387 1890179 R DNA gyrase is a type II topoisomerase that cleaves two strands of DNA and is ATP dependent.; DNA gyrase subunit A complement(1887387..1890179) Psychrobacter arcticus 273-4 3515505 YP_264826.1 CDS Psyc_1544 NC_007204.1 1890707 1891594 D methyltransferase 1890707..1891594 Psychrobacter arcticus 273-4 3515506 YP_264827.1 CDS Psyc_1545 NC_007204.1 1891773 1893020 R iron ABC transporter ATPase subunit complement(1891773..1893020) Psychrobacter arcticus 273-4 3515507 YP_264828.1 CDS Psyc_1546 NC_007204.1 1893427 1895121 R iron ABC transporter inner membrane protein complement(1893427..1895121) Psychrobacter arcticus 273-4 3515508 YP_264829.1 CDS Psyc_1547 NC_007204.1 1895175 1896299 R iron ABC transporter periplasmic binding protein complement(1895175..1896299) Psychrobacter arcticus 273-4 3515509 YP_264830.1 CDS Psyc_1548 NC_007204.1 1896555 1897298 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(1896555..1897298) Psychrobacter arcticus 273-4 3515510 YP_264831.1 CDS kdtA NC_007204.1 1897307 1898875 R 3-deoxy-D-manno-octulosonic-acid transferase complement(1897307..1898875) Psychrobacter arcticus 273-4 3515511 YP_264832.1 CDS Psyc_1550 NC_007204.1 1898998 1900293 R RBS found. Contains a Sel1-like repeat.; hypothetical protein complement(1898998..1900293) Psychrobacter arcticus 273-4 3515512 YP_264833.1 CDS cls NC_007204.1 1900396 1902039 R catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase complement(1900396..1902039) Psychrobacter arcticus 273-4 3515513 YP_264834.1 CDS orn NC_007204.1 1902885 1903472 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(1902885..1903472) Psychrobacter arcticus 273-4 3515516 YP_264835.1 CDS Psyc_1553 NC_007204.1 1903694 1904797 D sigma-54 interacting protein 1903694..1904797 Psychrobacter arcticus 273-4 3515517 YP_264836.1 CDS Psyc_1554 NC_007204.1 1904946 1905401 D rhodanese-like sulfurtransferase 1904946..1905401 Psychrobacter arcticus 273-4 3515518 YP_264837.1 CDS Psyc_1555 NC_007204.1 1905668 1905931 D glutaredoxin 1905668..1905931 Psychrobacter arcticus 273-4 3515519 YP_264838.1 CDS secB NC_007204.1 1906127 1906573 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 1906127..1906573 Psychrobacter arcticus 273-4 3515520 YP_264839.1 CDS adk NC_007204.1 1906919 1907575 R adenylate kinase complement(1906919..1907575) Psychrobacter arcticus 273-4 3515521 YP_264840.1 CDS cycH NC_007204.1 1907795 1909075 R cytochrome c-type biogenesis protein complement(1907795..1909075) Psychrobacter arcticus 273-4 3515522 YP_264841.1 CDS ccmH NC_007204.1 1909072 1909650 R cytochrome C-type biogenesis protein complement(1909072..1909650) Psychrobacter arcticus 273-4 3515523 YP_264842.1 CDS dsbE NC_007204.1 1909647 1910297 R periplasmic protein thiol:disulfide oxidoreductase DsbE complement(1909647..1910297) Psychrobacter arcticus 273-4 3515524 YP_264843.1 CDS ccmF NC_007204.1 1910299 1912344 R cytochrome c-type biogenesis protein complement(1910299..1912344) Psychrobacter arcticus 273-4 3515525 YP_264844.1 CDS Psyc_1562 NC_007204.1 1912583 1913917 R strong rbs. Predicted by glimmer, generation and critica. 4 transmembrane helices predicted.; hypothetical protein complement(1912583..1913917) Psychrobacter arcticus 273-4 3515526 YP_264845.1 CDS pb NC_007204.1 1914699 1916693 D peptidoglycan glycosyltransferase 1914699..1916693 Psychrobacter arcticus 273-4 3515527 YP_264846.1 CDS Psyc_1564 NC_007204.1 1916727 1917416 D methyltransferase 1916727..1917416 Psychrobacter arcticus 273-4 3515528 YP_264847.1 CDS rplM NC_007204.1 1917628 1918056 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1917628..1918056 Psychrobacter arcticus 273-4 3515529 YP_264848.1 CDS rpsI NC_007204.1 1918067 1918453 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1918067..1918453 Psychrobacter arcticus 273-4 3515530 YP_264849.1 CDS Psyc_1567 NC_007204.1 1918735 1919826 D lipid A biosynthesis acyltransferase 1918735..1919826 Psychrobacter arcticus 273-4 3515531 YP_264850.1 CDS trpS NC_007204.1 1919952 1921040 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1919952..1921040 Psychrobacter arcticus 273-4 3515532 YP_264851.1 CDS Psyc_1569 NC_007204.1 1921138 1922004 D DUF173 domain; condensin subunit ScpA 1921138..1922004 Psychrobacter arcticus 273-4 3515533 YP_264852.1 CDS Psyc_1570 NC_007204.1 1922067 1922618 D condensin subunit ScpB 1922067..1922618 Psychrobacter arcticus 273-4 3515534 YP_264853.1 CDS lolA NC_007204.1 1922898 1923599 R outer membrane lipoprotein carrier complement(1922898..1923599) Psychrobacter arcticus 273-4 3515535 YP_264854.1 CDS rpmA NC_007204.1 1923962 1924219 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(1923962..1924219) Psychrobacter arcticus 273-4 3515536 YP_264855.1 CDS rplU NC_007204.1 1924311 1924622 R 50S ribosomal protein L21 complement(1924311..1924622) Psychrobacter arcticus 273-4 3515537 YP_264856.1 CDS ispB NC_007204.1 1925313 1926362 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.677) with cleavage site probability 0.297 at residue 22; octaprenyl-diphosphate synthase 1925313..1926362 Psychrobacter arcticus 273-4 3515538 YP_264857.1 CDS Psyc_1575 NC_007204.1 1927044 1928390 D related to HlyD family; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.916) with cleavage site probability 0.676 at residue 22; RND membrane fusion protein AcrA 1927044..1928390 Psychrobacter arcticus 273-4 3515539 YP_264858.1 CDS acrB NC_007204.1 1928426 1931653 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.659) with cleavage site probability 0.413 at residue 30; RND superfmily multidrug/dye/detergent efflux pump AcrB 1928426..1931653 Psychrobacter arcticus 273-4 3515540 YP_264859.1 CDS oprM NC_007204.1 1931653 1933473 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.990) with cleavage site probability 0.740 at residue 27; outer membrane efflux protein, OprM 1931653..1933473 Psychrobacter arcticus 273-4 3515541 YP_264860.1 CDS hemB NC_007204.1 1933859 1934866 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1933859..1934866 Psychrobacter arcticus 273-4 3515542 YP_264861.1 CDS Psyc_1579 NC_007204.1 1935136 1936098 R IMP dehydrogenase complement(1935136..1936098) Psychrobacter arcticus 273-4 3515543 YP_264862.1 CDS Psyc_1580 NC_007204.1 1936841 1937182 D No RBS found.; hypothetical protein 1936841..1937182 Psychrobacter arcticus 273-4 3515545 YP_264863.1 CDS Psyc_1581 NC_007204.1 1937293 1937652 D RBS found. SignalP detects one signal peptidase target sequence.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.760 at residue 23; hypothetical protein 1937293..1937652 Psychrobacter arcticus 273-4 3515546 YP_264864.1 CDS Psyc_1582 NC_007204.1 1937839 1939161 R MFS Ni2+ efflux pump NreB complement(1937839..1939161) Psychrobacter arcticus 273-4 3515547 YP_264865.1 CDS Psyc_1583 NC_007204.1 1939192 1939383 R NreA protein complement(1939192..1939383) Psychrobacter arcticus 273-4 3515548 YP_264866.1 CDS Psyc_1584 NC_007204.1 1939623 1940021 R 3 transmembrane helices, predicted by glimmer, critica and generation, 3 base rbs; hypothetical protein complement(1939623..1940021) Psychrobacter arcticus 273-4 3515549 YP_264867.1 CDS Psyc_1585 NC_007204.1 1940158 1940640 D hypothetical protein 1940158..1940640 Psychrobacter arcticus 273-4 3515550 YP_264868.1 CDS tatA NC_007204.1 1940880 1941149 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin-arginine translocation protein TatA complement(1940880..1941149) Psychrobacter arcticus 273-4 3515551 YP_264869.1 CDS Psyc_1587 NC_007204.1 1941230 1943674 R copper/silver efflux P-type ATPase complement(1941230..1943674) Psychrobacter arcticus 273-4 3515552 YP_264870.1 CDS Psyc_1588 NC_007204.1 1944334 1945083 R Beta-lactamase-like superfamily protein complement(1944334..1945083) Psychrobacter arcticus 273-4 3515553 YP_264871.1 CDS Psyc_1589 NC_007204.1 1945157 1945642 R RBS found. Contains three predicted transmembrane domains.; hypothetical protein complement(1945157..1945642) Psychrobacter arcticus 273-4 3515554 YP_264872.1 CDS copB NC_007204.1 1945671 1946690 R copper-resistance protein CopB complement(1945671..1946690) Psychrobacter arcticus 273-4 3515555 YP_264873.1 CDS copA NC_007204.1 1946722 1948428 R copper-resistance protein CopA complement(1946722..1948428) Psychrobacter arcticus 273-4 3515556 YP_264874.1 CDS Psyc_1592 NC_007204.1 1948535 1949188 R hypothetical protein complement(1948535..1949188) Psychrobacter arcticus 273-4 3515557 YP_264875.1 CDS Psyc_1593 NC_007204.1 1949517 1950155 R cytochrome c heme-binding site complement(1949517..1950155) Psychrobacter arcticus 273-4 3515558 YP_264876.1 CDS Psyc_1594 NC_007204.1 1950234 1950536 R Found an AGGA, around 11 nucleotides upstream of the initiation codon.; hypothetical protein complement(1950234..1950536) Psychrobacter arcticus 273-4 3515559 YP_264877.1 CDS Psyc_1595 NC_007204.1 1950730 1951059 R predicted only by glimmer, 3 base rbs; hypothetical protein complement(1950730..1951059) Psychrobacter arcticus 273-4 3515560 YP_264878.1 CDS Psyc_1596 NC_007204.1 1951340 1952056 D adjacent protein is histidine kinase; two component heavy metal response transcriptional regulator 1951340..1952056 Psychrobacter arcticus 273-4 3515561 YP_264879.1 CDS Psyc_1597 NC_007204.1 1952058 1953545 D contains 2 transmembrane domains, HAMP, ATP binding Histidine kinase A, N-terminal:Bacterial sensor protein, C-term domains; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.743) with cleavage site probability 0.664 at residue 28; signal transduction histidine kinase 1952058..1953545 Psychrobacter arcticus 273-4 3515562 YP_264880.1 CDS Psyc_1598 NC_007204.1 1953960 1955129 R hlyD family secretion protein complement(1953960..1955129) Psychrobacter arcticus 273-4 3515563 YP_264881.1 CDS Psyc_1599 NC_007204.1 1955141 1957396 R drug efflux ABC transporter ATPase/inner membrane protein complement(1955141..1957396) Psychrobacter arcticus 273-4 3515564 YP_264882.1 CDS Psyc_1600 NC_007204.1 1957402 1958946 R OMF family outer membrane efflux protein complement(1957402..1958946) Psychrobacter arcticus 273-4 3515565 YP_264883.1 CDS Psyc_1601 NC_007204.1 1959325 1979472 R hypothetical protein complement(1959325..1979472) Psychrobacter arcticus 273-4 3515566 YP_264884.1 CDS Psyc_1602 NC_007204.1 1979536 1980258 R outer membrane protein OprF complement(1979536..1980258) Psychrobacter arcticus 273-4 3515567 YP_264885.1 CDS Psyc_1603 NC_007204.1 1981057 1981335 D RBS found; hypothetical protein 1981057..1981335 Psychrobacter arcticus 273-4 3515568 YP_264886.1 CDS Psyc_1604 NC_007204.1 1981427 1982449 D catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 1981427..1982449 Psychrobacter arcticus 273-4 3515569 YP_264887.1 CDS Psyc_1605 NC_007204.1 1982738 1983283 R RBS found. SignalP predicts a signal peptidase target sequence.; hypothetical protein complement(1982738..1983283) Psychrobacter arcticus 273-4 3515570 YP_264888.1 CDS ktrA NC_007204.1 1983299 1984000 R TrK family; K+ uptake transporter KtrA subunit complement(1983299..1984000) Psychrobacter arcticus 273-4 3515571 YP_264889.1 CDS ktrB NC_007204.1 1984051 1985811 R Trk family of K+ tranporters; K+ uptake transporter KtrB subunit complement(1984051..1985811) Psychrobacter arcticus 273-4 3515572 YP_264890.1 CDS Psyc_1608 NC_007204.1 1986060 1986548 R RBS found.; hypothetical protein complement(1986060..1986548) Psychrobacter arcticus 273-4 3515573 YP_264891.1 CDS Psyc_1609 NC_007204.1 1987131 1987460 D No RBS found.; hypothetical protein 1987131..1987460 Psychrobacter arcticus 273-4 3515575 YP_264892.1 CDS gpdh NC_007204.1 1988124 1989236 R gapA domain; glyceraldehyde 3-phosphate dehydrogenase family protein complement(1988124..1989236) Psychrobacter arcticus 273-4 3515577 YP_264893.1 CDS Psyc_1611 NC_007204.1 1989456 1991417 R DNA helicase: AAA ATPase complement(1989456..1991417) Psychrobacter arcticus 273-4 3515578 YP_264894.1 CDS Psyc_1612 NC_007204.1 1991704 1993230 D Chloroacetaldehyde is a possible substrate; aldehyde dehydrogenase 1991704..1993230 Psychrobacter arcticus 273-4 3515579 YP_264895.1 CDS Psyc_1613 NC_007204.1 1993486 1993812 D hypothetical protein 1993486..1993812 Psychrobacter arcticus 273-4 3515580 YP_264896.1 CDS Psyc_1614 NC_007204.1 1994034 1995677 D glucose-methanol-choline oxidoreductase 1994034..1995677 Psychrobacter arcticus 273-4 3515581 YP_264897.1 CDS Psyc_1615 NC_007204.1 1995727 1996716 R This protein contains a DNA binding Zn-finger domain associated with type I topoisomerase (COG0551, PF01396).; hypothetical protein complement(1995727..1996716) Psychrobacter arcticus 273-4 3515582 YP_264898.1 CDS Psyc_1616 NC_007204.1 1996738 1997616 R RBS found.; hypothetical protein complement(1996738..1997616) Psychrobacter arcticus 273-4 3515583 YP_264899.1 CDS tktA NC_007204.1 1997966 1999963 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(1997966..1999963) Psychrobacter arcticus 273-4 3515584 YP_264900.1 CDS serS NC_007204.1 2000255 2001538 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(2000255..2001538) Psychrobacter arcticus 273-4 3515585 YP_264901.1 CDS Psyc_1619 NC_007204.1 2001991 2002653 D RBS found. Contains two predicted transmembrane domains.; hypothetical protein 2001991..2002653 Psychrobacter arcticus 273-4 3515586 YP_264902.1 CDS Psyc_1620 NC_007204.1 2002892 2003377 D Citation: GRANT, R.A., FILMAN, D.J., FINKEL, S.E., KOLTER, R. AND HOGLE, J.M. The crystal structure of Dps, a ferritin homolog that bind; DNA-binding protein, Dps 2002892..2003377 Psychrobacter arcticus 273-4 3515587 YP_264903.1 CDS Psyc_1621 NC_007204.1 2003488 2004189 R 1 transmembranne helix, signal P predicted cleavage site, predicted by glitter,generation and critica, good rbs; hypothetical protein complement(2003488..2004189) Psychrobacter arcticus 273-4 3515588 YP_264904.1 CDS Psyc_1622 NC_007204.1 2004244 2005056 R regulatory inactivation of DnaA Hda protein complement(2004244..2005056) Psychrobacter arcticus 273-4 3515589 YP_264905.1 CDS Psyc_1623 NC_007204.1 2005468 2006571 R PerM family permease complement(2005468..2006571) Psychrobacter arcticus 273-4 3515590 YP_264906.1 CDS purM NC_007204.1 2006924 2007973 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2006924..2007973 Psychrobacter arcticus 273-4 3515591 YP_264907.1 CDS purN NC_007204.1 2007973 2008695 D phosphoribosylglycinamide formyltransferase 2007973..2008695 Psychrobacter arcticus 273-4 3515592 YP_264908.1 CDS Psyc_1626 NC_007204.1 2008784 2009773 R LysR family transcriptional regulator complement(2008784..2009773) Psychrobacter arcticus 273-4 3515593 YP_264909.1 CDS aceA NC_007204.1 2010478 2012064 D Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 2010478..2012064 Psychrobacter arcticus 273-4 3515594 YP_264910.1 CDS Psyc_1628 NC_007204.1 2012323 2013879 D adenylate cyclase 2012323..2013879 Psychrobacter arcticus 273-4 3515595 YP_264911.1 CDS Psyc_1629 NC_007204.1 2014149 2014670 R RBS found. Contains alignment to ErfK/YbiS/YcfS/YnhG domain HMM.; hypothetical protein complement(2014149..2014670) Psychrobacter arcticus 273-4 3515596 YP_264912.1 CDS Psyc_1630 NC_007204.1 2014805 2016067 D One predicted transmembrane domain.; hypothetical protein 2014805..2016067 Psychrobacter arcticus 273-4 3515597 YP_264913.1 CDS argG NC_007204.1 2016207 2017445 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(2016207..2017445) Psychrobacter arcticus 273-4 3515598 YP_264914.1 CDS pyrC NC_007204.1 2017795 2018871 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2017795..2018871 Psychrobacter arcticus 273-4 3515599 YP_264915.1 CDS Psyc_1633 NC_007204.1 2019038 2019757 D Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2019038..2019757 Psychrobacter arcticus 273-4 3515600 YP_264916.1 CDS Psyc_1634 NC_007204.1 2020398 2021243 R nucleotidylyl transferase, pyrophosphorylase complement(2020398..2021243) Psychrobacter arcticus 273-4 3515602 YP_264917.1 CDS ftsB NC_007204.1 2021356 2021664 R cell division protein FtsB complement(2021356..2021664) Psychrobacter arcticus 273-4 3515603 YP_264918.1 CDS eno NC_007204.1 2021756 2023072 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2021756..2023072) Psychrobacter arcticus 273-4 3515604 YP_264919.1 CDS Psyc_1637 NC_007204.1 2023393 2025753 R copper(heavy metal)-transporting P-type ATPase complement(2023393..2025753) Psychrobacter arcticus 273-4 3515605 YP_264920.1 CDS merP NC_007204.1 2026105 2026329 R MerP, periplasmic heavy metal binding/chaperone protein complement(2026105..2026329) Psychrobacter arcticus 273-4 3515606 YP_264921.1 CDS Psyc_1639 NC_007204.1 2026614 2026868 R RBS found; hypothetical protein complement(2026614..2026868) Psychrobacter arcticus 273-4 3515607 YP_264922.1 CDS kdsA NC_007204.1 2026896 2027771 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2026896..2027771) Psychrobacter arcticus 273-4 3515608 YP_264923.1 CDS pyrG NC_007204.1 2028125 2029759 R CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2028125..2029759) Psychrobacter arcticus 273-4 3515609 YP_264924.1 CDS ompN NC_007204.1 2030108 2031205 R porin complement(2030108..2031205) Psychrobacter arcticus 273-4 3515610 YP_264925.1 CDS Psyc_1643 NC_007204.1 2031762 2033966 R catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G complement(2031762..2033966) Psychrobacter arcticus 273-4 3515611 YP_264926.1 CDS Psyc_1644 NC_007204.1 2034613 2035398 D tRNA-(ms(2)io(6)a)-hydroxylase 2034613..2035398 Psychrobacter arcticus 273-4 3515612 YP_264927.1 CDS Psyc_1645 NC_007204.1 2035502 2036011 R RBS found; hypothetical protein complement(2035502..2036011) Psychrobacter arcticus 273-4 3515613 YP_264928.1 CDS Psyc_1646 NC_007204.1 2036135 2036449 R RBS present, no alignments found; hypothetical protein complement(2036135..2036449) Psychrobacter arcticus 273-4 3515614 YP_264929.1 CDS ppk NC_007204.1 2036722 2039019 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(2036722..2039019) Psychrobacter arcticus 273-4 3515615 YP_264930.1 CDS Psyc_1648 NC_007204.1 2039183 2039869 R monofunctional biosynthetic peptidoglycan transglycosylase complement(2039183..2039869) Psychrobacter arcticus 273-4 3515616 YP_264931.1 CDS Psyc_1649 NC_007204.1 2040143 2040451 D hypothetical protein 2040143..2040451 Psychrobacter arcticus 273-4 3515617 YP_264932.1 CDS glcD NC_007204.1 2040689 2042167 D glycolate oxidase subunit D 2040689..2042167 Psychrobacter arcticus 273-4 3515618 YP_264933.1 CDS glcE NC_007204.1 2042164 2043222 D glycolate oxidase FAD binding subunit 2042164..2043222 Psychrobacter arcticus 273-4 3515619 YP_264934.1 CDS glcF NC_007204.1 2043249 2044457 D glycolate oxidase iron-sulfur subunit 2043249..2044457 Psychrobacter arcticus 273-4 3515620 YP_264935.1 CDS glcA NC_007204.1 2044699 2046456 D glycolate/L-lactate:H+ symporter 2044699..2046456 Psychrobacter arcticus 273-4 3515621 YP_264936.1 CDS lldA NC_007204.1 2046659 2047867 D L-lactate dehydrogenase (cytochrome) 2046659..2047867 Psychrobacter arcticus 273-4 3515622 YP_264937.1 CDS Psyc_1655 NC_007204.1 2047966 2049096 D rhomboid family protein 2047966..2049096 Psychrobacter arcticus 273-4 3515623 YP_264938.1 CDS Psyc_1656 NC_007204.1 2049196 2050008 D Citation: J Biol Chem. 1999 Mar 5;274(10):6726-34.; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.980 at residue 34; outer membrane protein/scaffolding protein MipA 2049196..2050008 Psychrobacter arcticus 273-4 3515624 YP_264939.1 CDS fumC NC_007204.1 2050202 2051605 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(2050202..2051605) Psychrobacter arcticus 273-4 3515625 YP_264940.1 CDS Psyc_1658 NC_007204.1 2051749 2052441 D 5-formyltetrahydrofolate cyclo-ligase 2051749..2052441 Psychrobacter arcticus 273-4 3515626 YP_264941.1 CDS lon NC_007204.1 2052973 2055600 D Lon-A peptidase 2052973..2055600 Psychrobacter arcticus 273-4 3515627 YP_264942.1 CDS topA NC_007204.1 2055885 2058563 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(2055885..2058563) Psychrobacter arcticus 273-4 3515628 YP_264943.1 CDS Psyc_1661 NC_007204.1 2058843 2059439 R RBS present; hypothetical protein complement(2058843..2059439) Psychrobacter arcticus 273-4 3515629 YP_264944.1 CDS exbD NC_007204.1 2059781 2060182 R iopolymer transport protein ExbD/TolR complement(2059781..2060182) Psychrobacter arcticus 273-4 3515630 YP_264945.1 CDS exbB NC_007204.1 2060190 2060771 R MotA/TolQ/ExbB proton channel complement(2060190..2060771) Psychrobacter arcticus 273-4 3515631 YP_264946.1 CDS tonB NC_007204.1 2060877 2061890 R TonB/TolA energy transducing protein complement(2060877..2061890) Psychrobacter arcticus 273-4 3515632 YP_264947.1 CDS Psyc_1665 NC_007204.1 2062387 2063052 R prenylation site indicates possible post- translational modification; TetR family transcriptional regulator complement(2062387..2063052) Psychrobacter arcticus 273-4 3515633 YP_264948.1 CDS Psyc_1666 NC_007204.1 2063570 2063845 D Trp operon repressor 2063570..2063845 Psychrobacter arcticus 273-4 3515634 YP_264949.1 CDS trpE NC_007204.1 2063912 2065330 D anthranilate synthase, component I 2063912..2065330 Psychrobacter arcticus 273-4 3515635 YP_264950.1 CDS Psyc_1668 NC_007204.1 2065363 2066010 D anthranilate synthase, component II 2065363..2066010 Psychrobacter arcticus 273-4 3515636 YP_264951.1 CDS Psyc_1669 NC_007204.1 2066093 2066374 D hypothetical protein 2066093..2066374 Psychrobacter arcticus 273-4 3515637 YP_264952.1 CDS dhe4 NC_007204.1 2066483 2067829 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(2066483..2067829) Psychrobacter arcticus 273-4 3515638 YP_264953.1 CDS adhC NC_007204.1 2068135 2069265 R Zn-dependent alcohol dehydrogenase class III complement(2068135..2069265) Psychrobacter arcticus 273-4 3515639 YP_264954.1 CDS Psyc_1672 NC_007204.1 2069380 2070246 D LysR family transcriptional regulator 2069380..2070246 Psychrobacter arcticus 273-4 3515640 YP_264955.1 CDS Psyc_1673 NC_007204.1 2070339 2070857 D Protein of unknown function DUF302; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.445 at residue 21; hypothetical protein 2070339..2070857 Psychrobacter arcticus 273-4 3515641 YP_264956.1 CDS Psyc_1674 NC_007204.1 2070948 2073251 R it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases; transglutaminase-like superfamily protein complement(2070948..2073251) Psychrobacter arcticus 273-4 3515642 YP_264957.1 CDS Psyc_1675 NC_007204.1 2073248 2074309 R hypothetical protein complement(2073248..2074309) Psychrobacter arcticus 273-4 3515643 YP_264958.1 CDS moxR NC_007204.1 2074392 2075399 R methanol dehydrogenase regulatory protein complement(2074392..2075399) Psychrobacter arcticus 273-4 3515644 YP_264959.1 CDS Psyc_1677 NC_007204.1 2075468 2075923 R cytochrome C2 complement(2075468..2075923) Psychrobacter arcticus 273-4 3515645 YP_264960.1 CDS Psyc_1678 NC_007204.1 2076067 2078160 R diguanylate cyclase/phosphodiesterase complement(2076067..2078160) Psychrobacter arcticus 273-4 3515646 YP_264961.1 CDS kamA NC_007204.1 2078442 2079449 R Also shares some significant alignments with the DUF160 family of conserved hypothetical proteins.; L-lysine 2,3-aminomutase complement(2078442..2079449) Psychrobacter arcticus 273-4 3515647 YP_264962.1 CDS efp NC_007204.1 2079644 2080216 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2079644..2080216 Psychrobacter arcticus 273-4 3515648 YP_264963.1 CDS Psyc_1681 NC_007204.1 2080446 2081336 R HesA/MoeB/ThiF family protein complement(2080446..2081336) Psychrobacter arcticus 273-4 3515649 YP_264964.1 CDS Psyc_1682 NC_007204.1 2081409 2082416 R Citation: Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T. 2000. TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export. J Biol Chem. 275:16717-16722; TatD family Mg-dependent DNase complement(2081409..2082416) Psychrobacter arcticus 273-4 3515650 YP_264965.1 CDS ssb NC_007204.1 2082784 2083425 R single-strand binding protein complement(2082784..2083425) Psychrobacter arcticus 273-4 3515651 YP_264966.1 CDS Psyc_1684 NC_007204.1 2083535 2084899 R sugar efflux MFS family transporter complement(2083535..2084899) Psychrobacter arcticus 273-4 3515652 YP_264967.1 CDS uvrA NC_007204.1 2085665 2088571 D UvrA is a member of the ABC transporter superfamily of proteins. Except for UvrA proteins, all members of this family for which functions are known are involved in the transport of material through membranes.; excinuclease ABC subunit A 2085665..2088571 Psychrobacter arcticus 273-4 3515653 YP_264968.1 CDS Psyc_1686 NC_007204.1 2088732 2089664 R RBS present, no alignment; hypothetical protein complement(2088732..2089664) Psychrobacter arcticus 273-4 3515654 YP_264969.1 CDS Psyc_1687 NC_007204.1 2089744 2090562 R IS30 family transposase complement(2089744..2090562) Psychrobacter arcticus 273-4 3515655 YP_264970.1 CDS Psyc_1688 NC_007204.1 2090613 2090909 R IS3/IS911 family transposase OrfA complement(2090613..2090909) Psychrobacter arcticus 273-4 3515656 YP_264971.1 CDS Psyc_1689 NC_007204.1 2091040 2092329 D hypothetical protein 2091040..2092329 Psychrobacter arcticus 273-4 3515657 YP_264972.1 CDS Psyc_1690 NC_007204.1 2092556 2092837 R Protein of unknown function DUF503; hypothetical protein complement(2092556..2092837) Psychrobacter arcticus 273-4 3515658 YP_264973.1 CDS Psyc_1691 NC_007204.1 2093001 2093804 D Probably a conserved membrane protein: has 5 TM domains predicted; ThrE family exporter large subunit 2093001..2093804 Psychrobacter arcticus 273-4 3515659 YP_264974.1 CDS Psyc_1692 NC_007204.1 2093806 2094258 D ThrE family exporter small subunit 2093806..2094258 Psychrobacter arcticus 273-4 3515660 YP_264975.1 CDS gor NC_007204.1 2094602 2095957 D catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 2094602..2095957 Psychrobacter arcticus 273-4 3515661 YP_264976.1 CDS Psyc_1694 NC_007204.1 2096067 2096495 D 2 TM domains present; hypothetical protein 2096067..2096495 Psychrobacter arcticus 273-4 3515662 YP_264977.1 CDS Psyc_1695 NC_007204.1 2096525 2097148 R acetyltransferase complement(2096525..2097148) Psychrobacter arcticus 273-4 3515663 YP_264978.1 CDS Psyc_1696 NC_007204.1 2097506 2098717 D hypothetical protein 2097506..2098717 Psychrobacter arcticus 273-4 3515664 YP_264979.1 CDS Psyc_1697 NC_007204.1 2099061 2099942 R PHP family metal-dependent phosphoesterase complement(2099061..2099942) Psychrobacter arcticus 273-4 3515665 YP_264980.1 CDS ispZ NC_007204.1 2100097 2100648 D intracellular septation protein A 2100097..2100648 Psychrobacter arcticus 273-4 3515666 YP_264981.1 CDS Psyc_1699 NC_007204.1 2100813 2101142 D unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; hypothetical protein 2100813..2101142 Psychrobacter arcticus 273-4 3515667 YP_264982.1 CDS Psyc_1700 NC_007204.1 2101139 2101624 D 2 TM domain and presence of a signal peptide; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.991 at residue 36; hypothetical protein 2101139..2101624 Psychrobacter arcticus 273-4 3515668 YP_264983.1 CDS Psyc_1701 NC_007204.1 2101722 2103812 D hypothetical protein 2101722..2103812 Psychrobacter arcticus 273-4 3515669 YP_264984.1 CDS ubiA NC_007204.1 2104087 2105010 R UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase complement(2104087..2105010) Psychrobacter arcticus 273-4 3515670 YP_264985.1 CDS Psyc_1703 NC_007204.1 2105251 2105490 R 1 TM domain predicted, RBS present, no alignments; hypothetical protein complement(2105251..2105490) Psychrobacter arcticus 273-4 3515671 YP_264986.1 CDS Psyc_1704 NC_007204.1 2105531 2106421 R hypothetical protein complement(2105531..2106421) Psychrobacter arcticus 273-4 3515672 YP_264987.1 CDS bacA NC_007204.1 2106487 2107329 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(2106487..2107329) Psychrobacter arcticus 273-4 3515673 YP_264988.1 CDS Psyc_1706 NC_007204.1 2107461 2108144 R metal (zinc) dependent glycoprotease complement(2107461..2108144) Psychrobacter arcticus 273-4 3515674 YP_264989.1 CDS ffh NC_007204.1 2108357 2109892 R signal recognition particle subunit FFH/SRP54 (srp54) complement(2108357..2109892) Psychrobacter arcticus 273-4 3515675 YP_264990.1 CDS Psyc_1708 NC_007204.1 2110147 2110953 D proposed to be related to ABC transporter permease domains, contains 8 TM domains; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.863) with cleavage site probability 0.282 at residue 17; hypothetical protein 2110147..2110953 Psychrobacter arcticus 273-4 3515676 YP_264991.1 CDS Psyc_1709 NC_007204.1 2111001 2111369 R transposase complement(2111001..2111369) Psychrobacter arcticus 273-4 3515677 YP_264992.1 CDS rpmB NC_007204.1 2112006 2112242 D required for 70S ribosome assembly; 50S ribosomal protein L28 2112006..2112242 Psychrobacter arcticus 273-4 3515678 YP_264993.1 CDS rpmG NC_007204.1 2112408 2112563 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2112408..2112563 Psychrobacter arcticus 273-4 3515679 YP_264994.1 CDS Psyc_1712 NC_007204.1 2112789 2113100 R RBS present; hypothetical protein complement(2112789..2113100) Psychrobacter arcticus 273-4 3515680 YP_264995.1 CDS Psyc_1713 NC_007204.1 2113302 2113610 R possible integral membrane protein, 4 TM domains; hypothetical protein complement(2113302..2113610) Psychrobacter arcticus 273-4 3515681 YP_264996.1 CDS Psyc_1714 NC_007204.1 2113756 2114091 R possible integral membrane protein, 3 TM domains; hypothetical protein complement(2113756..2114091) Psychrobacter arcticus 273-4 3515682 YP_264997.1 CDS rpe NC_007204.1 2114190 2114879 R ribulose-5-phosphate 3-epimerase complement(2114190..2114879) Psychrobacter arcticus 273-4 3515683 YP_264998.1 CDS Psyc_1716 NC_007204.1 2115058 2115537 R hypothetical protein complement(2115058..2115537) Psychrobacter arcticus 273-4 3515684 YP_264999.1 CDS Psyc_1717 NC_007204.1 2115595 2116485 R Citation: S-formylglutathione hydrolase of Paracoccus denitrificans is homologous to human esterase D: a universal pathway for formaldehy; S-formylglutathione hydrolase complement(2115595..2116485) Psychrobacter arcticus 273-4 3515685 YP_265000.1 CDS Psyc_1718 NC_007204.1 2116576 2117976 R hypothetical protein complement(2116576..2117976) Psychrobacter arcticus 273-4 3515686 YP_265001.1 CDS htpG NC_007204.1 2118369 2120339 R molecular chaperone; heat shock protein 90 complement(2118369..2120339) Psychrobacter arcticus 273-4 3515687 YP_265002.1 CDS Psyc_1720 NC_007204.1 2120771 2121586 R hypothetical protein complement(2120771..2121586) Psychrobacter arcticus 273-4 3515688 YP_265003.1 CDS Psyc_1721 NC_007204.1 2121751 2121996 R hypothetical protein complement(2121751..2121996) Psychrobacter arcticus 273-4 3515689 YP_265004.1 CDS ispH NC_007204.1 2122039 2122995 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2122039..2122995) Psychrobacter arcticus 273-4 3515690 YP_265005.1 CDS gmk NC_007204.1 2123321 2123947 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 2123321..2123947 Psychrobacter arcticus 273-4 3515691 YP_265006.1 CDS rpoZ NC_007204.1 2124134 2124394 D Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2124134..2124394 Psychrobacter arcticus 273-4 3515692 YP_265007.1 CDS spoT NC_007204.1 2124740 2126926 D no direct information on the functions of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.; Citation: Koonin E.V. , Grishin N.V. , Aravind L. , Wolf Y.I. Evolution of aminoacyl-tRNA synthetases--analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events. Genome Res. 9: 689- 710 (1999); guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 2124740..2126926 Psychrobacter arcticus 273-4 3515693 YP_265008.1 CDS Psyc_1726 NC_007204.1 2127083 2127463 D May also play a role in purine biosynthesis regulation.; Citation: J Bacteriol. 1999 Jun 15; 181(12): 3810-3815; endoribonuclease L-PSP 2127083..2127463 Psychrobacter arcticus 273-4 3515694 YP_265009.1 CDS priA NC_007204.1 2127527 2129896 D replication restart DNA helicase PriA 2127527..2129896 Psychrobacter arcticus 273-4 3515695 YP_265010.1 CDS Psyc_1728 NC_007204.1 2130197 2130901 D hypothetical protein 2130197..2130901 Psychrobacter arcticus 273-4 3515696 YP_265011.1 CDS Psyc_1729 NC_007204.1 2130976 2132862 D glutathione-regulated K+ efflux antiporter 2130976..2132862 Psychrobacter arcticus 273-4 3515697 YP_265012.1 CDS Psyc_1730 NC_007204.1 2133052 2133981 R 4 transmembrane helices; hypothetical protein complement(2133052..2133981) Psychrobacter arcticus 273-4 3515698 YP_265013.1 CDS Psyc_1731 NC_007204.1 2134203 2135024 D tRNA (guanine-N(7)-)-methyltransferase 2134203..2135024 Psychrobacter arcticus 273-4 3515699 YP_265014.1 CDS recA NC_007204.1 2136062 2137120 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2136062..2137120 Psychrobacter arcticus 273-4 3515700 YP_265015.1 CDS recX NC_007204.1 2137298 2138419 D Citation: Stohl,E.A., Brockman,J.P., Burkle,K.L., Morimatsu,K., Kowalczykowski,S.C. and Seifert,H.S. Escherichia coli RecX inhibits RecA; inhibitor/regulator of recA, recX 2137298..2138419 Psychrobacter arcticus 273-4 3515701 YP_265016.1 CDS Psyc_1734 NC_007204.1 2138488 2139036 R hypothetical protein complement(2138488..2139036) Psychrobacter arcticus 273-4 3515702 YP_265017.1 CDS Psyc_1735 NC_007204.1 2139259 2139717 R 2 transmembrane helices and signal peptide present; hypothetical protein complement(2139259..2139717) Psychrobacter arcticus 273-4 3515703 YP_265018.1 CDS Psyc_1736 NC_007204.1 2139806 2140087 R hypothetical protein complement(2139806..2140087) Psychrobacter arcticus 273-4 3515704 YP_265019.1 CDS folP NC_007204.1 2140246 2141142 R dihydropteroate synthase complement(2140246..2141142) Psychrobacter arcticus 273-4 3515705 YP_265020.1 CDS ftsH NC_007204.1 2141297 2143183 R membrane protease FtsH catalytic subunit complement(2141297..2143183) Psychrobacter arcticus 273-4 3515706 YP_265021.1 CDS ftsJ NC_007204.1 2143595 2144227 R 23S rRNA methylase, heat shock protein complement(2143595..2144227) Psychrobacter arcticus 273-4 3515707 YP_265022.1 CDS Psyc_1740 NC_007204.1 2144589 2144897 D Possible RNA-binding protein containing KH domain; hypothetical protein 2144589..2144897 Psychrobacter arcticus 273-4 3515708 YP_265023.1 CDS Psyc_1741 NC_007204.1 2145112 2145873 D hypothetical protein 2145112..2145873 Psychrobacter arcticus 273-4 3515709 YP_265024.1 CDS Psyc_1742 NC_007204.1 2145972 2146700 R hypothetical protein complement(2145972..2146700) Psychrobacter arcticus 273-4 3515710 YP_265025.1 CDS Psyc_1743 NC_007204.1 2146968 2147483 D hypothetical protein 2146968..2147483 Psychrobacter arcticus 273-4 3515711 YP_265026.1 CDS lpxC NC_007204.1 2147782 2148744 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(2147782..2148744) Psychrobacter arcticus 273-4 3515712 YP_265027.1 CDS ftsZ NC_007204.1 2149177 2150373 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(2149177..2150373) Psychrobacter arcticus 273-4 3515713 YP_265028.1 CDS ftsA NC_007204.1 2150619 2151959 R cell division protein FtsA complement(2150619..2151959) Psychrobacter arcticus 273-4 3515714 YP_265029.1 CDS ftsQ NC_007204.1 2152064 2152891 R cell division protein FtsQ complement(2152064..2152891) Psychrobacter arcticus 273-4 3515715 YP_265030.1 CDS Psyc_1748 NC_007204.1 2153610 2154491 D There are 9 addittional ORFs identical to this one.; IS4 family transposase 2153610..2154491 Psychrobacter arcticus 273-4 3515716 YP_265031.1 CDS ddl NC_007204.1 2154516 2155616 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(2154516..2155616) Psychrobacter arcticus 273-4 3515717 YP_265032.1 CDS murC NC_007204.1 2155660 2157099 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(2155660..2157099) Psychrobacter arcticus 273-4 3515718 YP_265033.1 CDS murG NC_007204.1 2157169 2158254 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(2157169..2158254) Psychrobacter arcticus 273-4 3515719 YP_265034.1 CDS gshB NC_007204.1 2158594 2159577 R catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase complement(2158594..2159577) Psychrobacter arcticus 273-4 3515720 YP_265035.1 CDS pyrE NC_007204.1 2159685 2160389 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(2159685..2160389) Psychrobacter arcticus 273-4 3515721 YP_265036.1 CDS Psyc_1754 NC_007204.1 2160460 2161476 R hypothetical protein complement(2160460..2161476) Psychrobacter arcticus 273-4 3515722 YP_265037.1 CDS Psyc_1755 NC_007204.1 2161706 2162545 R nucleoside-diphosphate-sugar epimerase complement(2161706..2162545) Psychrobacter arcticus 273-4 3515723 YP_265038.1 CDS Psyc_1756 NC_007204.1 2162607 2164769 R hypothetical protein complement(2162607..2164769) Psychrobacter arcticus 273-4 3515724 YP_265039.1 CDS Psyc_1757 NC_007204.1 2164935 2165525 D N-acetyl-anhydromuranmyl-L-alanine amidase 2164935..2165525 Psychrobacter arcticus 273-4 3515725 YP_265040.1 CDS mviN NC_007204.1 2165674 2167224 D Citation: Rikki N. Hvorup, Brit Winnen, Abraham B. Chang, Yong Jiang, Xiao-Feng Zhou, and Milton H. Saier, Jr The multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily Eur J Biochem 2003 270: 799-813.; MviN family virulence factor 2165674..2167224 Psychrobacter arcticus 273-4 3515726 YP_265041.1 CDS Psyc_1759 NC_007204.1 2167347 2167967 D hypothetical protein 2167347..2167967 Psychrobacter arcticus 273-4 3515727 YP_265042.1 CDS Psyc_1760 NC_007204.1 2167992 2168642 R Citation: Bedford,D.J., Lewis,C.G. and Buttner,M.J. Characterization of a gene conferring bialaphos resistance in Streptomyces coelicolor A3(2) Gene 104 (1), 39-45 (1991); phosphinothricin acetyltransferase complement(2167992..2168642) Psychrobacter arcticus 273-4 3515728 YP_265043.1 CDS ribF NC_007204.1 2168899 2169942 D riboflavin kinase/FMN adenylyltransferase 2168899..2169942 Psychrobacter arcticus 273-4 3515729 YP_265044.1 CDS Psyc_1762 NC_007204.1 2170027 2170260 R hypothetical protein complement(2170027..2170260) Psychrobacter arcticus 273-4 3515730 YP_265045.1 CDS mdh NC_007204.1 2170547 2171536 R catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase complement(2170547..2171536) Psychrobacter arcticus 273-4 3515731 YP_265046.1 CDS Psyc_1764 NC_007204.1 2171938 2172564 R hypothetical protein complement(2171938..2172564) Psychrobacter arcticus 273-4 3515732 YP_265047.1 CDS Psyc_1765 NC_007204.1 2173190 2175409 R soluble lytic murein transglycosylase complement(2173190..2175409) Psychrobacter arcticus 273-4 3515733 YP_265048.1 CDS miaB NC_007204.1 2175888 2177378 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2175888..2177378 Psychrobacter arcticus 273-4 3515734 YP_265049.1 CDS Psyc_1767 NC_007204.1 2177620 2178369 R RhtB family is also homologous to the LysE famliy of efflux proteins; homoserine/homoserine lactone efflux pump complement(2177620..2178369) Psychrobacter arcticus 273-4 3515735 YP_265050.1 CDS argE NC_007204.1 2178476 2179714 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase complement(2178476..2179714) Psychrobacter arcticus 273-4 3515736 YP_265051.1 CDS Psyc_1769 NC_007204.1 2179986 2180639 R hypothetical protein complement(2179986..2180639) Psychrobacter arcticus 273-4 3515737 YP_265052.1 CDS Psyc_1770 NC_007204.1 2180879 2181322 D hypothetical protein 2180879..2181322 Psychrobacter arcticus 273-4 3515738 YP_265053.1 CDS Psyc_1771 NC_007204.1 2181430 2181876 D cell division protein ZapA 2181430..2181876 Psychrobacter arcticus 273-4 3515739 YP_265054.1 CDS Psyc_1772 NC_007204.1 2182115 2182372 R hypothetical protein complement(2182115..2182372) Psychrobacter arcticus 273-4 3515740 YP_265055.1 CDS glyS NC_007204.1 2182547 2184640 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(2182547..2184640) Psychrobacter arcticus 273-4 3515741 YP_265056.1 CDS glyQ NC_007204.1 2184650 2185639 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(2184650..2185639) Psychrobacter arcticus 273-4 3515742 YP_265057.1 CDS Psyc_1775 NC_007204.1 2186075 2186287 R Citation: Brissette JL, Weiner L, Ripmaster TL, Model P. Characterization and sequence of the Escherichia coli stress-induced psp operon. J Mol Biol. 1991 Jul 5;220(1):35-48; stress-responsive transcriptional regulator, PspC complement(2186075..2186287) Psychrobacter arcticus 273-4 3515743 YP_265058.1 CDS Psyc_1776 NC_007204.1 2186824 2187276 D 2 TM domains; hypothetical protein 2186824..2187276 Psychrobacter arcticus 273-4 3515744 YP_265059.1 CDS Psyc_1777 NC_007204.1 2187429 2188037 R hypothetical protein complement(2187429..2188037) Psychrobacter arcticus 273-4 3515745 YP_265060.1 CDS Psyc_1778 NC_007204.1 2188547 2189413 R transposase OrfB complement(2188547..2189413) Psychrobacter arcticus 273-4 3515746 YP_265061.1 CDS Psyc_1779 NC_007204.1 2189355 2189621 R IS3 family transposase complement(2189355..2189621) Psychrobacter arcticus 273-4 3515747 YP_265062.1 CDS Psyc_1780 NC_007204.1 2189763 2190659 R hypothetical protein complement(2189763..2190659) Psychrobacter arcticus 273-4 3515748 YP_265063.1 CDS Psyc_1781 NC_007204.1 2190788 2193100 R heme-hemopexin-binding/utilization protein complement(2190788..2193100) Psychrobacter arcticus 273-4 3515749 YP_265064.1 CDS Psyc_1782 NC_007204.1 2193166 2194830 R heme-hemopexin utilization protein B complement(2193166..2194830) Psychrobacter arcticus 273-4 3515750 YP_265065.1 CDS Psyc_1783 NC_007204.1 2196414 2197226 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.601 at residue 30; zinc metallopeptidase 2196414..2197226 Psychrobacter arcticus 273-4 3515752 YP_265066.1 CDS bolA NC_007204.1 2197435 2197779 D transcriptional regulator BolA 2197435..2197779 Psychrobacter arcticus 273-4 3515753 YP_265067.1 CDS Psyc_1785 NC_007204.1 2197852 2198211 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.814) with cleavage site probability 0.283 at residue 29; hypothetical protein 2197852..2198211 Psychrobacter arcticus 273-4 3515754 YP_265068.1 CDS Psyc_1786 NC_007204.1 2198362 2198751 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.775 at residue 21; hypothetical protein 2198362..2198751 Psychrobacter arcticus 273-4 3515755 YP_265069.1 CDS Psyc_1787 NC_007204.1 2198848 2199366 D IS3/IS911 family transposase orfA 2198848..2199366 Psychrobacter arcticus 273-4 3515756 YP_265070.1 CDS Psyc_1788 NC_007204.1 2199408 2200193 D IS3 family transposase 2199408..2200193 Psychrobacter arcticus 273-4 3515757 YP_265071.1 CDS Psyc_1789 NC_007204.1 2200298 2200732 R thioredoxin complement(2200298..2200732) Psychrobacter arcticus 273-4 3515758 YP_265072.1 CDS Psyc_1790 NC_007204.1 2200907 2201779 R metallo-beta-lactamase superfamily protein complement(2200907..2201779) Psychrobacter arcticus 273-4 3515759 YP_265073.1 CDS Psyc_1791 NC_007204.1 2202140 2202430 D ArsR family transcriptional regulator 2202140..2202430 Psychrobacter arcticus 273-4 3515760 YP_265074.1 CDS Psyc_1792 NC_007204.1 2202501 2204213 D SulP family sulfate permease 2202501..2204213 Psychrobacter arcticus 273-4 3515761 YP_265075.1 CDS Psyc_1793 NC_007204.1 2204392 2204718 D hypothetical protein 2204392..2204718 Psychrobacter arcticus 273-4 3515762 YP_265076.1 CDS Psyc_1794 NC_007204.1 2204856 2205188 D hypothetical protein 2204856..2205188 Psychrobacter arcticus 273-4 3515763 YP_265077.1 CDS ahpF NC_007204.1 2205524 2207101 R alkyl hydroperoxide reductase complement(2205524..2207101) Psychrobacter arcticus 273-4 3515764 YP_265078.1 CDS Psyc_1796 NC_007204.1 2207771 2208019 D hypothetical protein 2207771..2208019 Psychrobacter arcticus 273-4 3515765 YP_265079.1 CDS ahpC NC_007204.1 2208259 2208825 R alkyl hydroperoxide reductase complement(2208259..2208825) Psychrobacter arcticus 273-4 3515766 YP_265080.1 CDS Psyc_1798 NC_007204.1 2209091 2209999 D LysR family transcriptional regulator 2209091..2209999 Psychrobacter arcticus 273-4 3515767 YP_265081.1 CDS Psyc_1799 NC_007204.1 2210189 2210794 R thiopurine S-methyltransferase motif: ubiquinone biosynthesis; hypothetical protein complement(2210189..2210794) Psychrobacter arcticus 273-4 3515768 YP_265082.1 CDS Psyc_1800 NC_007204.1 2210929 2211597 R DUF45, zinc metalloprotease motif - COG1451; hypothetical protein complement(2210929..2211597) Psychrobacter arcticus 273-4 3515769 YP_265083.1 CDS Psyc_1801 NC_007204.1 2211599 2213191 R hypothetical protein complement(2211599..2213191) Psychrobacter arcticus 273-4 3515770 YP_265084.1 CDS Psyc_1802 NC_007204.1 2213195 2214364 R hypothetical protein complement(2213195..2214364) Psychrobacter arcticus 273-4 3515771 YP_265085.1 CDS Psyc_1803 NC_007204.1 2214478 2216166 R cytochrome c heme-binding motif; hypothetical protein complement(2214478..2216166) Psychrobacter arcticus 273-4 3515772 YP_265086.1 CDS Psyc_1804 NC_007204.1 2216566 2218008 R possibly iron regulated; imelysin complement(2216566..2218008) Psychrobacter arcticus 273-4 3515773 YP_265087.1 CDS Psyc_1805 NC_007204.1 2218442 2219095 R OmpA/OmpF family outer membrane protein complement(2218442..2219095) Psychrobacter arcticus 273-4 3515774 YP_265088.1 CDS Psyc_1806 NC_007204.1 2219610 2219813 D hypothetical protein 2219610..2219813 Psychrobacter arcticus 273-4 3515775 YP_265089.1 CDS Psyc_1807 NC_007204.1 2219995 2221110 D 3 transmembrane helices; hypothetical protein 2219995..2221110 Psychrobacter arcticus 273-4 3515776 YP_265090.1 CDS minC NC_007204.1 2221188 2222066 D septum site-determining protein MinC 2221188..2222066 Psychrobacter arcticus 273-4 3515777 YP_265091.1 CDS minD NC_007204.1 2222688 2223500 D septum site-determining protein MinD 2222688..2223500 Psychrobacter arcticus 273-4 3515778 YP_265092.1 CDS minE NC_007204.1 2223503 2223793 D cell division topological specificity factor MinE 2223503..2223793 Psychrobacter arcticus 273-4 3515779 YP_265093.1 CDS hybC NC_007204.1 2224089 2224616 R nickel-dependent hydrogenase b561-type cytochrome subunit complement(2224089..2224616) Psychrobacter arcticus 273-4 3515780 YP_265094.1 CDS Psyc_1812 NC_007204.1 2224820 2225317 R hypothetical protein complement(2224820..2225317) Psychrobacter arcticus 273-4 3515781 YP_265095.1 CDS Psyc_1813 NC_007204.1 2225363 2232217 R hybrid two-component sensor and regulatory protein complement(2225363..2232217) Psychrobacter arcticus 273-4 3515782 YP_265096.1 CDS pilK NC_007204.1 2232248 2233150 R adjacent to histidine kinase and response regulator pilH and pilI; chemotaxis protein CheR complement(2232248..2233150) Psychrobacter arcticus 273-4 3515783 YP_265097.1 CDS pilJ NC_007204.1 2233360 2234787 R pilI and pilH like genes upstream act os histidine kinases necessary for activity of complex; chemotaxis sensory transducer protein complement(2233360..2234787) Psychrobacter arcticus 273-4 3515784 YP_265098.1 CDS pilI NC_007204.1 2234982 2235512 R adjacent to pilH- like response regulator; type IV pili signal transducer complement(2234982..2235512) Psychrobacter arcticus 273-4 3515785 YP_265099.1 CDS pilH NC_007204.1 2235516 2235878 R adjacent to sensor component; two-component response regulator complement(2235516..2235878) Psychrobacter arcticus 273-4 3515786 YP_265100.1 CDS pilG NC_007204.1 2236056 2236433 R response regulator domain only; two component reponse regulator complement(2236056..2236433) Psychrobacter arcticus 273-4 3515787 YP_265101.1 CDS Psyc_1819 NC_007204.1 2237312 2238430 D hypothetical protein 2237312..2238430 Psychrobacter arcticus 273-4 3515788 YP_265102.1 CDS Psyc_1820 NC_007204.1 2238714 2239436 D two component transcriptional regulator 2238714..2239436 Psychrobacter arcticus 273-4 3515789 YP_265103.1 CDS Psyc_1821 NC_007204.1 2239574 2241685 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.992) with cleavage site probability 0.729 at residue 28; signal transduction histidine kinase sensor 2239574..2241685 Psychrobacter arcticus 273-4 3515790 YP_265104.1 CDS metN NC_007204.1 2242000 2242770 D Citation: J Bacteriol. 2002 Sep;184(17):4930-2; methionine ABC transporter ATPase subunit MetN 2242000..2242770 Psychrobacter arcticus 273-4 3515791 YP_265105.1 CDS metI NC_007204.1 2242790 2243476 D Citation: J Bacteriol. 2002 Sep;184(17):4930-2; methionine ABC transporter ATPase subunit MetI 2242790..2243476 Psychrobacter arcticus 273-4 3515792 YP_265106.1 CDS metQ NC_007204.1 2243744 2244697 D Citation: J Bacteriol. 2002 Sep;184(17):4930-2; methionine ABC transporter periplasmic solute binding protein metQ 2243744..2244697 Psychrobacter arcticus 273-4 3515793 YP_265107.1 CDS ccmE NC_007204.1 2244850 2245350 R CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE complement(2244850..2245350) Psychrobacter arcticus 273-4 3515794 YP_265108.1 CDS ccmD NC_007204.1 2245590 2245814 R Citation: Proc. Natl. Acad. Sci. USA 96: 6462-6467, 1999; cytochrome c biogenesis protein, CcmD complement(2245590..2245814) Psychrobacter arcticus 273-4 3515795 YP_265109.1 CDS ccmC NC_007204.1 2245847 2246635 R Citation: Proc. Natl. Acad. Sci. USA 96: 6462-6467, 1999; heme exporter, subunit CcmC complement(2245847..2246635) Psychrobacter arcticus 273-4 3515796 YP_265110.1 CDS ccmB NC_007204.1 2246866 2247603 R Citation: Proc. Natl. Acad. Sci. USA 96: 6462-6467, 1999; ABC transporter inner membrane protein CcmB complement(2246866..2247603) Psychrobacter arcticus 273-4 3515797 YP_265111.1 CDS ccmA NC_007204.1 2247671 2248300 R Citation: Proc. Natl. Acad. Sci. USA 96: 6462-6467, 1999; ABC transporter ATPase subunit CcmA complement(2247671..2248300) Psychrobacter arcticus 273-4 3515798 YP_265112.1 CDS Psyc_1830 NC_007204.1 2248417 2249469 D hypothetical protein 2248417..2249469 Psychrobacter arcticus 273-4 3515799 YP_265113.1 CDS Psyc_1831 NC_007204.1 2249651 2250052 D -protein is only 100 aa, all best hits are 300+ aa; hypothetical protein 2249651..2250052 Psychrobacter arcticus 273-4 3515800 YP_265114.1 CDS Psyc_1832 NC_007204.1 2249987 2250760 R DUF81, 7 transmembrane helices; hypothetical protein complement(2249987..2250760) Psychrobacter arcticus 273-4 3515801 YP_265115.1 CDS dfp NC_007204.1 2251041 2252426 R bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(2251041..2252426) Psychrobacter arcticus 273-4 3515802 YP_265116.1 CDS radC NC_007204.1 2252545 2253228 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2252545..2253228 Psychrobacter arcticus 273-4 3515803 YP_265117.1 CDS fadE NC_007204.1 2253553 2256537 D functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2253553..2256537 Psychrobacter arcticus 273-4 3515804 YP_265118.1 CDS gltP NC_007204.1 2256923 2258296 D 8 transmembrane helices identified by tmhmm; sodium/proton:dicarboxylate (glutamate) symporter 2256923..2258296 Psychrobacter arcticus 273-4 3515805 YP_265119.1 CDS Psyc_1837 NC_007204.1 2258449 2259204 R DUF81, 5 transmembrane helices; hypothetical protein complement(2258449..2259204) Psychrobacter arcticus 273-4 3515806 YP_265120.1 CDS nhaA NC_007204.1 2259774 2260976 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 2259774..2260976 Psychrobacter arcticus 273-4 3515807 YP_265121.1 CDS Psyc_1839 NC_007204.1 2261314 2262678 D 1 transmembrane helix; hypothetical protein 2261314..2262678 Psychrobacter arcticus 273-4 3515808 YP_265122.1 CDS Psyc_1840 NC_007204.1 2262931 2263668 R MutT/nudix family protein complement(2262931..2263668) Psychrobacter arcticus 273-4 3515809 YP_265123.1 CDS Psyc_1841 NC_007204.1 2264325 2264888 D Possible protein from MutT/nudix family; hypothetical protein 2264325..2264888 Psychrobacter arcticus 273-4 3515810 YP_265124.1 CDS Psyc_1842 NC_007204.1 2265219 2268293 R peptidase M16 family complement(2265219..2268293) Psychrobacter arcticus 273-4 3515811 YP_265125.1 CDS Psyc_1843 NC_007204.1 2268611 2269072 D Has an USP domain; universal stress protein 2268611..2269072 Psychrobacter arcticus 273-4 3515812 YP_265126.1 CDS Psyc_1844 NC_007204.1 2269252 2270187 R All possess a potential HTH DNA-binding motif towards their N-termini.; LysR family transcriptional regulator complement(2269252..2270187) Psychrobacter arcticus 273-4 3515813 YP_265127.1 CDS Psyc_1845 NC_007204.1 2270430 2271512 D 10 TM domains and a signal peptide predicted: Possible membrane protein; hypothetical protein 2270430..2271512 Psychrobacter arcticus 273-4 3515814 YP_265128.1 CDS Psyc_1846 NC_007204.1 2271782 2271991 R universal stress protein; Citation: Sand O, et al. Microbiology. 2003 Aug;149(Pt 8):2107-17. PMID: 12904550 2: Phadtare S, et al. J Biol Chem. 2002 Mar 1;277(9):7239-45. Epub 2001 Dec 27. PMID: 11756430 Phadadtare S, Inouye M. J. Bacteriol. 2001 Feb;183(4):1205-14. PMID: 1115793; cold-shock DNA-binding protein family protein complement(2271782..2271991) Psychrobacter arcticus 273-4 3515815 YP_265129.1 CDS Psyc_1847 NC_007204.1 2272237 2272659 R DUF454, 3 transmembrane helices; hypothetical protein complement(2272237..2272659) Psychrobacter arcticus 273-4 3515816 YP_265130.1 CDS Psyc_1848 NC_007204.1 2272826 2273185 R Found weak RBS, no alignments; hypothetical protein complement(2272826..2273185) Psychrobacter arcticus 273-4 3515817 YP_265131.1 CDS Psyc_1849 NC_007204.1 2273303 2275093 R 2 transmembrane helices; hypothetical protein complement(2273303..2275093) Psychrobacter arcticus 273-4 3515818 YP_265132.1 CDS valS NC_007204.1 2275303 2278257 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(2275303..2278257) Psychrobacter arcticus 273-4 3515819 YP_265133.1 CDS Psyc_1851 NC_007204.1 2278623 2279663 D formate/nitrate transporter 2278623..2279663 Psychrobacter arcticus 273-4 3515820 YP_265134.1 CDS Psyc_1852 NC_007204.1 2279660 2280139 R DUF74; hypothetical protein complement(2279660..2280139) Psychrobacter arcticus 273-4 3515821 YP_265135.1 CDS Psyc_1853 NC_007204.1 2280191 2280667 R DUF74; hypothetical protein complement(2280191..2280667) Psychrobacter arcticus 273-4 3515822 YP_265136.1 CDS Psyc_1854 NC_007204.1 2280830 2281387 R hypothetical protein complement(2280830..2281387) Psychrobacter arcticus 273-4 3515823 YP_265137.1 CDS Psyc_1855 NC_007204.1 2281755 2281991 R Found RBS, no alignment obtained; hypothetical protein complement(2281755..2281991) Psychrobacter arcticus 273-4 3515824 YP_265138.1 CDS Psyc_1856 NC_007204.1 2282186 2283727 R Found RBS, 2 membrane helices found (POSSIBLE N-term signal sequence from TMHMM).; hypothetical protein complement(2282186..2283727) Psychrobacter arcticus 273-4 3515825 YP_265139.1 CDS serB NC_007204.1 2284175 2285377 D This orf contains no alignments to the ACT domain.; phosphoserine phosphatase 2284175..2285377 Psychrobacter arcticus 273-4 3515826 YP_265140.1 CDS Psyc_1858 NC_007204.1 2285686 2286711 D Possible membrane protein: 7 transmembrane helices; hypothetical protein 2285686..2286711 Psychrobacter arcticus 273-4 3515827 YP_265141.1 CDS Psyc_1859 NC_007204.1 2287102 2287491 D hypothetical protein 2287102..2287491 Psychrobacter arcticus 273-4 3515828 YP_265142.1 CDS Psyc_1860 NC_007204.1 2287667 2288173 D hypothetical protein 2287667..2288173 Psychrobacter arcticus 273-4 3515829 YP_265143.1 CDS bioB NC_007204.1 2288383 2289519 D biotin synthase 2288383..2289519 Psychrobacter arcticus 273-4 3515830 YP_265144.1 CDS Psyc_1862 NC_007204.1 2289611 2290045 D Possible membrane protein: 4 TM domains; hypothetical protein 2289611..2290045 Psychrobacter arcticus 273-4 3515831 YP_265145.1 CDS Psyc_1863 NC_007204.1 2290156 2290980 R Found RBS, no alignment, found a signal peptide; hypothetical protein complement(2290156..2290980) Psychrobacter arcticus 273-4 3515832 YP_265146.1 CDS Psyc_1864 NC_007204.1 2291162 2291653 R 2 transmembrane helices; hypothetical protein complement(2291162..2291653) Psychrobacter arcticus 273-4 3515833 YP_265147.1 CDS rph NC_007204.1 2291836 2292552 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(2291836..2292552) Psychrobacter arcticus 273-4 3515834 YP_265148.1 CDS Psyc_1866 NC_007204.1 2292913 2294697 R -adjacent gene has same function or1224; long-chain fatty acid CoA ligase (AMP-binding) complement(2292913..2294697) Psychrobacter arcticus 273-4 3515835 YP_265149.1 CDS fadD NC_007204.1 2295403 2297130 R long-chain fatty acid CoA ligase (AMP-binding) complement(2295403..2297130) Psychrobacter arcticus 273-4 3515836 YP_265150.1 CDS parC NC_007204.1 2297852 2300170 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2297852..2300170 Psychrobacter arcticus 273-4 3515837 YP_265151.1 CDS Psyc_1869 NC_007204.1 2300167 2301174 D hypothetical protein 2300167..2301174 Psychrobacter arcticus 273-4 3515838 YP_265152.1 CDS cof NC_007204.1 2301288 2302085 D Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars.; class II-B haloacid dehalogenase 2301288..2302085 Psychrobacter arcticus 273-4 3515839 YP_265153.1 CDS Psyc_1871 NC_007204.1 2302590 2303381 R 3-oxoacyl-ACP reductase complement(2302590..2303381) Psychrobacter arcticus 273-4 3515840 YP_265154.1 CDS Psyc_1872 NC_007204.1 2303677 2304912 R 5 transmembrane helices; hypothetical protein complement(2303677..2304912) Psychrobacter arcticus 273-4 3515841 YP_265155.1 CDS gltD NC_007204.1 2305213 2306634 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(2305213..2306634) Psychrobacter arcticus 273-4 3515842 YP_265156.1 CDS gltB NC_007204.1 2306818 2311281 R catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha complement(2306818..2311281) Psychrobacter arcticus 273-4 3515843 YP_265157.1 CDS Psyc_1875 NC_007204.1 2312055 2312345 R hypothetical protein complement(2312055..2312345) Psychrobacter arcticus 273-4 3515844 YP_265158.1 CDS Psyc_1876 NC_007204.1 2312335 2313291 R RBS found, no alignment; hypothetical protein complement(2312335..2313291) Psychrobacter arcticus 273-4 3515845 YP_265159.1 CDS aroB NC_007204.1 2313403 2314569 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(2313403..2314569) Psychrobacter arcticus 273-4 3515846 YP_265160.1 CDS aroK NC_007204.1 2314791 2315351 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(2314791..2315351) Psychrobacter arcticus 273-4 3515847 YP_265161.1 CDS pilQ NC_007204.1 2315518 2317788 R Outer Bacterial Membrane Secretin (Secretin) Family; fimbrial assembly protein PilQ complement(2315518..2317788) Psychrobacter arcticus 273-4 3515848 YP_265162.1 CDS pilP NC_007204.1 2317816 2318355 R type IV pilus assembly complement(2317816..2318355) Psychrobacter arcticus 273-4 3515849 YP_265163.1 CDS pilO NC_007204.1 2318355 2319083 R type IV pilus biogenesis complement(2318355..2319083) Psychrobacter arcticus 273-4 3515850 YP_265164.1 CDS pilN NC_007204.1 2319080 2319745 R type IV pilus biogenesis fimbrial assembly complement(2319080..2319745) Psychrobacter arcticus 273-4 3515851 YP_265165.1 CDS pilM NC_007204.1 2319745 2320800 R type IV pilus assembly protein complement(2319745..2320800) Psychrobacter arcticus 273-4 3515852 YP_265166.1 CDS mrcA NC_007204.1 2320996 2323602 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.951 at residue 32; penicillin-binding protein 1A 2320996..2323602 Psychrobacter arcticus 273-4 3515853 YP_265167.1 CDS Psyc_1885 NC_007204.1 2323944 2324483 R hypothetical protein complement(2323944..2324483) Psychrobacter arcticus 273-4 3515854 YP_265168.1 CDS rpoC NC_007204.1 2324839 2329059 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(2324839..2329059) Psychrobacter arcticus 273-4 3515855 YP_265169.1 CDS rpoB NC_007204.1 2329248 2333366 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(2329248..2333366) Psychrobacter arcticus 273-4 3515856 YP_265170.1 CDS rplL NC_007204.1 2334121 2334492 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(2334121..2334492) Psychrobacter arcticus 273-4 3515857 YP_265171.1 CDS rplJ NC_007204.1 2334619 2335146 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(2334619..2335146) Psychrobacter arcticus 273-4 3515858 YP_265172.1 CDS rplA NC_007204.1 2335584 2336285 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(2335584..2336285) Psychrobacter arcticus 273-4 3515859 YP_265173.1 CDS rplK NC_007204.1 2336285 2336716 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(2336285..2336716) Psychrobacter arcticus 273-4 3515860 YP_265174.1 CDS nusG NC_007204.1 2336805 2337335 R Citation: Nehrke K.W. , Platt T. , Zalatan F. NusG alters rho-dependent termination of transcription in vitro independent of kinetic coupling. Gene Expr. 3: 119- 133 (1993) [PubMed: 7505669 ]; transcription antitermination protein nusG complement(2336805..2337335) Psychrobacter arcticus 273-4 3515861 YP_265175.1 CDS secE NC_007204.1 2337407 2337895 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(2337407..2337895) Psychrobacter arcticus 273-4 3515862 YP_265176.1 CDS tufBb NC_007204.1 2338442 2339632 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(2338442..2339632) Psychrobacter arcticus 273-4 3515864 YP_265177.1 CDS fusA1 NC_007204.1 2339853 2341979 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(2339853..2341979) Psychrobacter arcticus 273-4 3515865 YP_265178.1 CDS rpsG NC_007204.1 2342366 2342839 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(2342366..2342839) Psychrobacter arcticus 273-4 3515866 YP_265179.1 CDS rpsL NC_007204.1 2343048 2343422 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(2343048..2343422) Psychrobacter arcticus 273-4 3515867 YP_265180.1 CDS Psyc_1898 NC_007204.1 2343962 2344990 R RBS found, no alignment against anything in BLAST; hypothetical protein complement(2343962..2344990) Psychrobacter arcticus 273-4 3515868 YP_265181.1 CDS fabB NC_007204.1 2345649 2346884 D 3-oxoacyl-ACP synthase 2345649..2346884 Psychrobacter arcticus 273-4 3515869 YP_265182.1 CDS pabB NC_007204.1 2346888 2348597 D p-aminobenzoate synthase, component I 2346888..2348597 Psychrobacter arcticus 273-4 3515870 YP_265183.1 CDS Psyc_1901 NC_007204.1 2348849 2349982 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(2348849..2349982) Psychrobacter arcticus 273-4 3515871 YP_265184.1 CDS hisD NC_007204.1 2350045 2351340 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(2350045..2351340) Psychrobacter arcticus 273-4 3515872 YP_265185.1 CDS hisG NC_007204.1 2351587 2352282 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase complement(2351587..2352282) Psychrobacter arcticus 273-4 3515873 YP_265186.1 CDS murA NC_007204.1 2352430 2353698 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2352430..2353698) Psychrobacter arcticus 273-4 3515874 YP_265187.1 CDS Psyc_1905 NC_007204.1 2353814 2354065 R In E. coli, over-expression of this protein causes round morphology and may be involved in switching the cell between elongation and septation systems during cell division. The expression of BolA is growth rate regulated and is induced during the tran; BolA transcriptional superfamily; hypothetical protein complement(2353814..2354065) Psychrobacter arcticus 273-4 3515875 YP_265188.1 CDS Psyc_1906 NC_007204.1 2354227 2355177 R esterase/lipase/thioesterase, active site; hypothetical protein complement(2354227..2355177) Psychrobacter arcticus 273-4 3515876 YP_265189.1 CDS Psyc_1907 NC_007204.1 2355421 2356101 R transport-associated domain; hypothetical protein complement(2355421..2356101) Psychrobacter arcticus 273-4 3515877 YP_265190.1 CDS Psyc_1908 NC_007204.1 2356328 2356849 R protein of unknown function UPF0102; hypothetical protein complement(2356328..2356849) Psychrobacter arcticus 273-4 3515878 YP_265191.1 CDS Psyc_1909 NC_007204.1 2357009 2357968 D TP methylase domain; uroporphyrin-III C/tetrapyrrole methyltransferase 2357009..2357968 Psychrobacter arcticus 273-4 3515879 YP_265192.1 CDS pfkB NC_007204.1 2358027 2359046 D carbohydrate kinase 2358027..2359046 Psychrobacter arcticus 273-4 3515880 YP_265193.1 CDS Psyc_1911 NC_007204.1 2359205 2359888 R HesB/NifU - like protein; hypothetical protein complement(2359205..2359888) Psychrobacter arcticus 273-4 3515881 YP_265194.1 CDS Psyc_1912 NC_007204.1 2360398 2360745 D carboxymuconolactone decarboxylase family protein 2360398..2360745 Psychrobacter arcticus 273-4 3515882 YP_265195.1 CDS nadR NC_007204.1 2361125 2362192 D NadM-Nudix subfamily; involved in creation of nicotanimide adenine dinucleotide NAD from either biosynthetic or salvage pathways; bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase 2361125..2362192 Psychrobacter arcticus 273-4 3515883 YP_265196.1 CDS Psyc_1914 NC_007204.1 2362309 2363706 D nicotinate phosphoribosyltransferase 2362309..2363706 Psychrobacter arcticus 273-4 3515884 YP_265197.1 CDS Psyc_1915 NC_007204.1 2363700 2364542 D Lipolytic enzyme, G-D-S-L family, motif; hypothetical protein 2363700..2364542 Psychrobacter arcticus 273-4 3515885 YP_265198.2 CDS rpmE2 NC_007204.1 2364663 2364944 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(2364663..2364944) Psychrobacter arcticus 273-4 3515886 YP_265199.1 CDS Psyc_1917 NC_007204.1 2365381 2366004 D Possible base-induced periplasmic protein. Contains a signal peptide; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.984 at residue 28; hypothetical protein 2365381..2366004 Psychrobacter arcticus 273-4 3515887 YP_265200.1 CDS Psyc_1918 NC_007204.1 2366158 2366592 R lipoprotein repeat motif; hypothetical protein complement(2366158..2366592) Psychrobacter arcticus 273-4 3515888 YP_265201.1 CDS Psyc_1919 NC_007204.1 2367112 2368686 D hypothetical protein 2367112..2368686 Psychrobacter arcticus 273-4 3515889 YP_265202.1 CDS Psyc_1920 NC_007204.1 2368788 2369465 R lysine decarboxylases motif; hypothetical protein complement(2368788..2369465) Psychrobacter arcticus 273-4 3515890 YP_265203.1 CDS Psyc_1921 NC_007204.1 2369784 2370374 D metallopeptidase peptidase 2369784..2370374 Psychrobacter arcticus 273-4 3515891 YP_265204.1 CDS phoR NC_007204.1 2370387 2371478 R signal transduction histidine kinase sensor complement(2370387..2371478) Psychrobacter arcticus 273-4 3515892 YP_265205.1 CDS phoB NC_007204.1 2371567 2372271 R two component transcriptional regulator complement(2371567..2372271) Psychrobacter arcticus 273-4 3515893 YP_265206.1 CDS Psyc_1924 NC_007204.1 2372433 2372888 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(2372433..2372888) Psychrobacter arcticus 273-4 3515894 YP_265207.1 CDS psd NC_007204.1 2373065 2373898 D catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 2373065..2373898 Psychrobacter arcticus 273-4 3515895 YP_265208.1 CDS pstS NC_007204.1 2374233 2375387 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.993) with cleavage site probability 0.329 at residue 21; phosphate ABC transporter periplasmic solute binding subunit PstS 2374233..2375387 Psychrobacter arcticus 273-4 3515896 YP_265209.1 CDS pstC NC_007204.1 2375595 2376545 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.639) with cleavage site probability 0.626 at residue 45; phosphate ABC transporter inner membrane protein PstC 2375595..2376545 Psychrobacter arcticus 273-4 3515897 YP_265210.1 CDS pstA NC_007204.1 2376628 2377542 D phosphate ABC transporter inner membrane protein PstA 2376628..2377542 Psychrobacter arcticus 273-4 3515898 YP_265211.1 CDS pstB NC_007204.1 2377642 2378559 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 2377642..2378559 Psychrobacter arcticus 273-4 3515899 YP_265212.1 CDS phoU NC_007204.1 2378645 2379376 D phosphate uptake regulator PhoU 2378645..2379376 Psychrobacter arcticus 273-4 3515900 YP_265213.1 CDS Psyc_1931 NC_007204.1 2379467 2380111 R contains metal phosphohydrolase domains only but no regulatory domains as seen with signal transduction function proteins; metal dependent phosphohydrolase complement(2379467..2380111) Psychrobacter arcticus 273-4 3515901 YP_265214.1 CDS Psyc_1932 NC_007204.1 2380283 2380858 R isochorismatase hydrolase; hypothetical protein complement(2380283..2380858) Psychrobacter arcticus 273-4 3515902 YP_265215.1 CDS fadA NC_007204.1 2381258 2382430 R FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase complement(2381258..2382430) Psychrobacter arcticus 273-4 3515903 YP_265216.1 CDS fadB NC_007204.1 2382574 2384733 R includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha complement(2382574..2384733) Psychrobacter arcticus 273-4 3515904 YP_265217.1 CDS ispA NC_007204.1 2385466 2386473 D farnesyl-diphosphate synthase 2385466..2386473 Psychrobacter arcticus 273-4 3515905 YP_265218.1 CDS Psyc_1936 NC_007204.1 2386514 2387332 D hypothetical protein 2386514..2387332 Psychrobacter arcticus 273-4 3515906 YP_265219.1 CDS Psyc_1937 NC_007204.1 2387413 2388357 D hypothetical protein 2387413..2388357 Psychrobacter arcticus 273-4 3515907 YP_265220.1 CDS sodB NC_007204.1 2388452 2389081 R superoxide dismutase complement(2388452..2389081) Psychrobacter arcticus 273-4 3515908 YP_265221.1 CDS Psyc_1939 NC_007204.1 2389621 2390274 D HAM1 protein 2389621..2390274 Psychrobacter arcticus 273-4 3515909 YP_265222.1 CDS tig NC_007204.1 2390857 2392200 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2390857..2392200 Psychrobacter arcticus 273-4 3515910 YP_265223.1 CDS clpP NC_007204.1 2392628 2393305 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2392628..2393305 Psychrobacter arcticus 273-4 3515911 YP_265224.1 CDS clpX NC_007204.1 2393438 2394712 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2393438..2394712 Psychrobacter arcticus 273-4 3515912 YP_265225.1 CDS Psyc_1943 NC_007204.1 2395326 2396309 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.887) with cleavage site probability 0.295 at residue 27; cytochrome C 2395326..2396309 Psychrobacter arcticus 273-4 3515913 YP_265226.1 CDS pfoR NC_007204.1 2396574 2397668 R Perfringolysin O (pfo)is a pore-forming cytolysin that is able to lyse red blood cells. 9 transmembrane helices predicted; Citation: FEMS Microbiology Letters 225 (2003)241-247.; toxin regulator pfoR complement(2396574..2397668) Psychrobacter arcticus 273-4 3515914 YP_265227.1 CDS Psyc_1945 NC_007204.1 2397818 2398597 R hypothetical protein complement(2397818..2398597) Psychrobacter arcticus 273-4 3515915 YP_265228.1 CDS argS NC_007204.1 2398666 2400495 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(2398666..2400495) Psychrobacter arcticus 273-4 3515916 YP_265229.1 CDS Psyc_1947 NC_007204.1 2400924 2401142 D hypothetical protein 2400924..2401142 Psychrobacter arcticus 273-4 3515917 YP_265230.1 CDS Psyc_1948 NC_007204.1 2401172 2402224 R possible methyltransferase function; hypothetical protein complement(2401172..2402224) Psychrobacter arcticus 273-4 3515918 YP_265231.1 CDS Psyc_1949 NC_007204.1 2402286 2403074 R methyltransferase complement(2402286..2403074) Psychrobacter arcticus 273-4 3515919 YP_265232.1 CDS Psyc_1950 NC_007204.1 2403309 2403830 D peptide methionine sulfoxide reductase 2403309..2403830 Psychrobacter arcticus 273-4 3516136 YP_265233.1 CDS Psyc_1951 NC_007204.1 2404108 2404290 D hypothetical protein 2404108..2404290 Psychrobacter arcticus 273-4 3515920 YP_265234.1 CDS Psyc_1952 NC_007204.1 2404530 2406005 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.951 at residue 27; transglycosylase 2404530..2406005 Psychrobacter arcticus 273-4 3515921 YP_265235.1 CDS Psyc_1953 NC_007204.1 2406301 2406600 R RBS found, no hit with any other protein; hypothetical protein complement(2406301..2406600) Psychrobacter arcticus 273-4 3515922 YP_265236.1 CDS Psyc_1954 NC_007204.1 2407053 2408045 R glutamate racemase complement(2407053..2408045) Psychrobacter arcticus 273-4 3515923 YP_265237.1 CDS Psyc_1955 NC_007204.1 2408217 2408978 R hypothetical protein complement(2408217..2408978) Psychrobacter arcticus 273-4 3515924 YP_265238.1 CDS Psyc_1956 NC_007204.1 2409522 2411354 D electron transfer flavoprotein-ubiquinone oxidoreductase 2409522..2411354 Psychrobacter arcticus 273-4 3515925 YP_265239.1 CDS Psyc_1958 NC_007204.1 2411722 2411862 R transposase complement(2411722..2411862) Psychrobacter arcticus 273-4 3515927 YP_265240.1 CDS Psyc_1959 NC_007204.1 2412963 2413247 D 2 TM domains; hypothetical protein 2412963..2413247 Psychrobacter arcticus 273-4 3515928 YP_265241.1 CDS Psyc_1960 NC_007204.1 2413252 2415120 D SSS family Na(+)/solute symporter 2413252..2415120 Psychrobacter arcticus 273-4 3515929 YP_265242.1 CDS Psyc_1961 NC_007204.1 2415401 2415946 D hypothetical protein 2415401..2415946 Psychrobacter arcticus 273-4 3515930 YP_265243.1 CDS Psyc_1962 NC_007204.1 2416294 2416770 R hypothetical protein complement(2416294..2416770) Psychrobacter arcticus 273-4 3515931 YP_265244.1 CDS Psyc_1963 NC_007204.1 2417214 2418503 R TRAP-T family transporter large inner membrane subunit complement(2417214..2418503) Psychrobacter arcticus 273-4 3515932 YP_265245.1 CDS Psyc_1964 NC_007204.1 2418500 2419027 R TRAP-T family transporter small inner membrane subunit complement(2418500..2419027) Psychrobacter arcticus 273-4 3515933 YP_265246.1 CDS Psyc_1965 NC_007204.1 2419048 2420109 R TRAP-T family transporter periplasmic substrate binding subunit complement(2419048..2420109) Psychrobacter arcticus 273-4 3515934 YP_265247.1 CDS Psyc_1966 NC_007204.1 2426328 2427047 R hypothetical protein complement(2426328..2427047) Psychrobacter arcticus 273-4 3515940 YP_265248.1 CDS upp NC_007204.1 2427332 2427979 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 2427332..2427979 Psychrobacter arcticus 273-4 3515941 YP_265249.1 CDS ydfG NC_007204.1 2428060 2428812 D glucose/ribitol dehydrogenase 2428060..2428812 Psychrobacter arcticus 273-4 3515942 YP_265250.1 CDS Psyc_1969 NC_007204.1 2428983 2429210 R hypothetical protein complement(2428983..2429210) Psychrobacter arcticus 273-4 3515943 YP_265251.1 CDS tyrS NC_007204.1 2429332 2430543 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(2429332..2430543) Psychrobacter arcticus 273-4 3515944 YP_265252.1 CDS anmK NC_007204.1 2430663 2432063 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2430663..2432063 Psychrobacter arcticus 273-4 3515945 YP_265253.1 CDS fabF NC_007204.1 2432160 2433575 D 3-oxoacyl-ACP synthase 2432160..2433575 Psychrobacter arcticus 273-4 3515946 YP_265254.1 CDS Psyc_1973 NC_007204.1 2433691 2434554 D hypothetical protein 2433691..2434554 Psychrobacter arcticus 273-4 3515947 YP_265255.1 CDS Psyc_1974 NC_007204.1 2434777 2436594 R metallopeptidase complement(2434777..2436594) Psychrobacter arcticus 273-4 3515948 YP_265256.1 CDS Psyc_1975 NC_007204.1 2437018 2437428 R RBS found, no alignment obtained; hypothetical protein complement(2437018..2437428) Psychrobacter arcticus 273-4 3515949 YP_265257.1 CDS Psyc_1976 NC_007204.1 2437575 2439149 R apolipoprotein N-acyltransferase complement(2437575..2439149) Psychrobacter arcticus 273-4 3515950 YP_265258.1 CDS corC NC_007204.1 2439445 2440344 R magnesium and cobalt efflux protein, CorC complement(2439445..2440344) Psychrobacter arcticus 273-4 3515951 YP_265259.1 CDS Psyc_1978 NC_007204.1 2440617 2441951 D Possible membrane spanning protein: 3 TM domains; hypothetical protein 2440617..2441951 Psychrobacter arcticus 273-4 3515952 YP_265260.1 CDS Psyc_1979 NC_007204.1 2441984 2442547 R hypothetical protein complement(2441984..2442547) Psychrobacter arcticus 273-4 3515953 YP_265261.1 CDS Psyc_1980 NC_007204.1 2442708 2443445 D dienelactone hydrolase 2442708..2443445 Psychrobacter arcticus 273-4 3515954 YP_265262.1 CDS Psyc_1981 NC_007204.1 2443675 2443917 D hypothetical protein 2443675..2443917 Psychrobacter arcticus 273-4 3515955 YP_265263.1 CDS rbgA NC_007204.1 2444303 2445259 D essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 2444303..2445259 Psychrobacter arcticus 273-4 3515956 YP_265264.1 CDS Psyc_1983 NC_007204.1 2445353 2446567 D COG3328 and PFam00872.; transposase mutator family protein 2445353..2446567 Psychrobacter arcticus 273-4 3515957 YP_265265.1 CDS mutY NC_007204.1 2446700 2448061 D Citation: Michaels ML, Miller JH. 1992. The GO system protects organisms from the mutagenic effect of the spontaneous lesion 8-hydroxyguanine (7,8-dihydro-8-oxoguanine). J Bacteriol. 174(20):6321-5.; A/G-specific adenine glycosylase 2446700..2448061 Psychrobacter arcticus 273-4 3515958 YP_265266.1 CDS tesB NC_007204.1 2448309 2449211 R acyl-CoA thioesterase complement(2448309..2449211) Psychrobacter arcticus 273-4 3515959 YP_265267.1 CDS hepA NC_007204.1 2449487 2452435 R transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA complement(2449487..2452435) Psychrobacter arcticus 273-4 3515960 YP_265268.1 CDS Psyc_1987 NC_007204.1 2453224 2454183 D D-isomer specific 2-hydroxyacid dehydrogenase 2453224..2454183 Psychrobacter arcticus 273-4 3515961 YP_265269.1 CDS rluA NC_007204.1 2454208 2454921 R ribosomal large subunit pseudouridine synthase A complement(2454208..2454921) Psychrobacter arcticus 273-4 3515962 YP_265270.1 CDS trxA NC_007204.1 2455356 2455682 D thioredoxin 2455356..2455682 Psychrobacter arcticus 273-4 3515963 YP_265271.1 CDS rho NC_007204.1 2456173 2457480 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2456173..2457480 Psychrobacter arcticus 273-4 3515964 YP_265272.1 CDS Psyc_1991 NC_007204.1 2457828 2458067 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.994) with cleavage site probability 0.314 at residue 25; hypothetical protein 2457828..2458067 Psychrobacter arcticus 273-4 3515965 YP_265273.1 CDS Psyc_1992 NC_007204.1 2458371 2459255 R Members of this family of bacterial proteins are described as hypothetical proteins or zinc metallopeptidases:there is no evidence to support their function as metallopeptidases.; neutral zinc metallopeptidase complement(2458371..2459255) Psychrobacter arcticus 273-4 3515966 YP_265274.1 CDS Psyc_1993 NC_007204.1 2459800 2460138 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.978 at residue 21; hypothetical protein 2459800..2460138 Psychrobacter arcticus 273-4 3515967 YP_265275.1 CDS ihfA NC_007204.1 2460454 2460753 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(2460454..2460753) Psychrobacter arcticus 273-4 3515968 YP_265276.1 CDS pheT NC_007204.1 2461001 2463406 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(2461001..2463406) Psychrobacter arcticus 273-4 3515969 YP_265277.1 CDS pheS NC_007204.1 2463466 2464521 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(2463466..2464521) Psychrobacter arcticus 273-4 3515970 YP_265278.1 CDS rplT NC_007204.1 2464845 2465201 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(2464845..2465201) Psychrobacter arcticus 273-4 3515971 YP_265279.1 CDS rpmI NC_007204.1 2465337 2465534 R 50S ribosomal protein L35 complement(2465337..2465534) Psychrobacter arcticus 273-4 3515972 YP_265280.1 CDS hisI NC_007204.1 2466006 2466854 D This orf aligns to domains of both pyrophosphohydrolase and cyclohydrolase functions, suggesting a bifunctional enzyme.; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase 2466006..2466854 Psychrobacter arcticus 273-4 3515973 YP_265281.1 CDS tatA NC_007204.1 2467043 2467306 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin-arginine translocation protein TatA 2467043..2467306 Psychrobacter arcticus 273-4 3515974 YP_265282.1 CDS tatB NC_007204.1 2467342 2468031 D Sec-independent protein translocase TatB 2467342..2468031 Psychrobacter arcticus 273-4 3515975 YP_265283.1 CDS tatC NC_007204.1 2468031 2468867 D Sec-independent protein translocase TatC 2468031..2468867 Psychrobacter arcticus 273-4 3515976 YP_265284.1 CDS Psyc_2003 NC_007204.1 2469003 2470502 D Low score to superfamily I DNA and RNA helicases, COG0210.; DNA helicase 2469003..2470502 Psychrobacter arcticus 273-4 3515977 YP_265285.1 CDS dus NC_007204.1 2470575 2471627 D tRNA-dihydrouridine synthase 2470575..2471627 Psychrobacter arcticus 273-4 3515978 YP_265286.1 CDS Psyc_2005 NC_007204.1 2471677 2472102 R 3 transmembrane helices; hypothetical protein complement(2471677..2472102) Psychrobacter arcticus 273-4 3515979 YP_265287.1 CDS Psyc_2006 NC_007204.1 2472117 2472530 R hypothetical protein complement(2472117..2472530) Psychrobacter arcticus 273-4 3515980 YP_265288.1 CDS mutT NC_007204.1 2473141 2473662 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 2473141..2473662 Psychrobacter arcticus 273-4 3515981 YP_265289.1 CDS adh NC_007204.1 2473759 2474853 R Protein with conserved domain:Zn ion binding; alcohol dehydrogenase complement(2473759..2474853) Psychrobacter arcticus 273-4 3515982 YP_265290.1 CDS Psyc_2009 NC_007204.1 2475073 2475957 R DUF833; hypothetical protein complement(2475073..2475957) Psychrobacter arcticus 273-4 3515983 YP_265291.1 CDS Psyc_2010 NC_007204.1 2476423 2477307 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2476423..2477307 Psychrobacter arcticus 273-4 3515984 YP_265292.1 CDS thyA NC_007204.1 2477380 2478282 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2477380..2478282 Psychrobacter arcticus 273-4 3515985 YP_265293.1 CDS folA NC_007204.1 2478326 2478892 D dihydrofolate reductase 2478326..2478892 Psychrobacter arcticus 273-4 3515986 YP_265294.1 CDS uvrC NC_007204.1 2479357 2481201 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(2479357..2481201) Psychrobacter arcticus 273-4 3515987 YP_265295.1 CDS Psyc_2014 NC_007204.1 2481361 2482881 R 11 transmembrane domains; hypothetical protein complement(2481361..2482881) Psychrobacter arcticus 273-4 3515988 YP_265296.1 CDS Psyc_2015 NC_007204.1 2483367 2483924 D hypothetical protein 2483367..2483924 Psychrobacter arcticus 273-4 3515989 YP_265297.1 CDS rplS NC_007204.1 2484193 2484585 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2484193..2484585) Psychrobacter arcticus 273-4 3515990 YP_265298.1 CDS trmD NC_007204.1 2484774 2485538 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2484774..2485538) Psychrobacter arcticus 273-4 3515991 YP_265299.1 CDS rimM NC_007204.1 2485641 2486174 R 16S rRNA-processing protein RimM complement(2485641..2486174) Psychrobacter arcticus 273-4 3515992 YP_265300.1 CDS rpsP NC_007204.1 2486372 2486641 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2486372..2486641) Psychrobacter arcticus 273-4 3515993 YP_265301.1 CDS envZ NC_007204.1 2486863 2488431 D signal transduction histidine kinase sensor 2486863..2488431 Psychrobacter arcticus 273-4 3515994 YP_265302.1 CDS Psyc_2021 NC_007204.1 2488581 2490266 R adjacent to predicted histidine kinase response regulator; signal transduction histidine kinase sensor complement(2488581..2490266) Psychrobacter arcticus 273-4 3515995 YP_265303.1 CDS Psyc_2022 NC_007204.1 2490519 2491235 R two component transcriptional regulator complement(2490519..2491235) Psychrobacter arcticus 273-4 3515996 YP_265304.1 CDS atpC NC_007204.1 2491765 2492181 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon complement(2491765..2492181) Psychrobacter arcticus 273-4 3515997 YP_265305.1 CDS atpD NC_007204.1 2492286 2493719 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta complement(2492286..2493719) Psychrobacter arcticus 273-4 3515998 YP_265306.1 CDS atpG NC_007204.1 2493770 2494651 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma complement(2493770..2494651) Psychrobacter arcticus 273-4 3515999 YP_265307.1 CDS atpA NC_007204.1 2494913 2496457 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha complement(2494913..2496457) Psychrobacter arcticus 273-4 3516000 YP_265308.1 CDS atpH NC_007204.1 2496550 2497173 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta complement(2496550..2497173) Psychrobacter arcticus 273-4 3516001 YP_265309.1 CDS atpF NC_007204.1 2497187 2497657 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B complement(2497187..2497657) Psychrobacter arcticus 273-4 3516002 YP_265310.1 CDS atpE NC_007204.1 2497775 2498023 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C complement(2497775..2498023) Psychrobacter arcticus 273-4 3516003 YP_265311.1 CDS Psyc_2030 NC_007204.1 2498057 2498923 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A complement(2498057..2498923) Psychrobacter arcticus 273-4 3516004 YP_265312.1 CDS atpI NC_007204.1 2499637 2500059 R ATP synthase subunit I complement(2499637..2500059) Psychrobacter arcticus 273-4 3516005 YP_265313.1 CDS znuA NC_007204.1 2500460 2501395 R ABC zinc transporter periplasmic solute binding protein ZnuA complement(2500460..2501395) Psychrobacter arcticus 273-4 3516006 YP_265314.1 CDS Psyc_2033 NC_007204.1 2501643 2502158 D contained winged helix domains so likely DNA binding function; FUR family transcriptional regulator 2501643..2502158 Psychrobacter arcticus 273-4 3516007 YP_265315.1 CDS znuC NC_007204.1 2502283 2503014 D ABC zinc transporter ATPase subunit ZnuC 2502283..2503014 Psychrobacter arcticus 273-4 3516008 YP_265316.1 CDS znuB NC_007204.1 2503090 2503923 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.776) with cleavage site probability 0.559 at residue 23; ABC zinc transporter inner membrane protein ZnuB 2503090..2503923 Psychrobacter arcticus 273-4 3516009 YP_265317.1 CDS Psyc_2036 NC_007204.1 2504046 2504885 D cyclic AMP phosphodiesterase 2504046..2504885 Psychrobacter arcticus 273-4 3516010 YP_265318.1 CDS dksA NC_007204.1 2505409 2505849 D Expression is increased under low pH conditions. Stancik LM, Stancik DM, et al. (2002). pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. J Bacteriol 2002;184(15);4246-58. PMID: 12107143; Citation: Brown L, Gentry D, Elliott T, Cashel M (2002). DksA affects ppGpp induction of RpoS at a translational level. J Bacteriol 184(16);4455-65. PMID: 12142416; regulator RpoS 2505409..2505849 Psychrobacter arcticus 273-4 3516011 YP_265319.1 CDS Psyc_2038 NC_007204.1 2506072 2507079 D tRNA synthetase domain-containing protein 2506072..2507079 Psychrobacter arcticus 273-4 3516012 YP_265320.1 CDS ftsW NC_007204.1 2507257 2508453 R cell division protein FtsW complement(2507257..2508453) Psychrobacter arcticus 273-4 3516013 YP_265321.1 CDS murD NC_007204.1 2508808 2510238 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(2508808..2510238) Psychrobacter arcticus 273-4 3516014 YP_265322.1 CDS Psyc_2041 NC_007204.1 2510748 2512247 D SulP family sulfate permease 2510748..2512247 Psychrobacter arcticus 273-4 3516015 YP_265323.1 CDS Psyc_2042 NC_007204.1 2512394 2513248 D hypothetical protein 2512394..2513248 Psychrobacter arcticus 273-4 3516016 YP_265324.1 CDS glnK NC_007204.1 2513688 2514026 D nitrogen regulatory protein P-II 2513688..2514026 Psychrobacter arcticus 273-4 3516017 YP_265325.1 CDS amtB NC_007204.1 2514104 2515366 D ammonium transporter 2514104..2515366 Psychrobacter arcticus 273-4 3516018 YP_265326.1 CDS Psyc_2045 NC_007204.1 2515519 2515902 R hypothetical protein complement(2515519..2515902) Psychrobacter arcticus 273-4 3516019 YP_265327.1 CDS Psyc_2046 NC_007204.1 2516174 2516437 R Found RBS, no alignment found; hypothetical protein complement(2516174..2516437) Psychrobacter arcticus 273-4 3516020 YP_265328.1 CDS Psyc_2047 NC_007204.1 2516655 2517563 R DNA/RNA non-specific endonuclease (Mg-dependent) complement(2516655..2517563) Psychrobacter arcticus 273-4 3516021 YP_265329.1 CDS Psyc_2048 NC_007204.1 2518261 2519055 D 3 transmembrane domains; hypothetical protein 2518261..2519055 Psychrobacter arcticus 273-4 3516023 YP_265330.1 CDS cls NC_007204.1 2519139 2520578 D cardiolipin synthetase 2 2519139..2520578 Psychrobacter arcticus 273-4 3516024 YP_265331.1 CDS rrmA NC_007204.1 2520768 2521709 R rRNA (guanine-N1-)-methyltransferase complement(2520768..2521709) Psychrobacter arcticus 273-4 3516025 YP_265332.1 CDS mraY NC_007204.1 2521871 2522989 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(2521871..2522989) Psychrobacter arcticus 273-4 3516026 YP_265333.1 CDS murF NC_007204.1 2522993 2524450 R UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(2522993..2524450) Psychrobacter arcticus 273-4 3516027 YP_265334.1 CDS murE NC_007204.1 2524541 2526295 R UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(2524541..2526295) Psychrobacter arcticus 273-4 3516028 YP_265335.1 CDS ftsI NC_007204.1 2526367 2528454 R peptidoglycan synthetase FtsI complement(2526367..2528454) Psychrobacter arcticus 273-4 3516029 YP_265336.1 CDS Psyc_2055 NC_007204.1 2528451 2528930 R FtsL motif, although no BLAST hit, contains ftsL motifided from Pfam, contain RBS; hypothetical protein complement(2528451..2528930) Psychrobacter arcticus 273-4 3516030 YP_265337.1 CDS mraW NC_007204.1 2529143 2530297 R S-adenosyl-methyltransferase MraW complement(2529143..2530297) Psychrobacter arcticus 273-4 3516031 YP_265338.1 CDS gltX NC_007204.1 2530575 2532104 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2530575..2532104 Psychrobacter arcticus 273-4 3516032 YP_265339.1 CDS Psyc_2058 NC_007204.1 2532272 2532637 D hypothetical protein 2532272..2532637 Psychrobacter arcticus 273-4 3516033 YP_265340.1 CDS Psyc_2059 NC_007204.1 2533304 2533957 D LysE family amino acid efflux protein 2533304..2533957 Psychrobacter arcticus 273-4 3516036 YP_265341.1 CDS Psyc_2060 NC_007204.1 2533990 2534448 D hypothetical protein 2533990..2534448 Psychrobacter arcticus 273-4 3516037 YP_265342.1 CDS acnA NC_007204.1 2534578 2537397 R catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(2534578..2537397) Psychrobacter arcticus 273-4 3516038 YP_265343.1 CDS Psyc_2062 NC_007204.1 2537779 2538792 R hypothetical protein complement(2537779..2538792) Psychrobacter arcticus 273-4 3516039 YP_265344.1 CDS Psyc_2063 NC_007204.1 2538908 2539624 D 6 transmembrane helices predicted; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.690) with cleavage site probability 0.683 at residue 25; hypothetical protein 2538908..2539624 Psychrobacter arcticus 273-4 3516040 YP_265345.1 CDS Psyc_2064 NC_007204.1 2539668 2540219 D hypothetical protein 2539668..2540219 Psychrobacter arcticus 273-4 3516041 YP_265346.1 CDS Psyc_2065 NC_007204.1 2540243 2541166 R glutamine amidotransferase, class-II protein complement(2540243..2541166) Psychrobacter arcticus 273-4 3516042 YP_265347.1 CDS Psyc_2066 NC_007204.1 2541167 2541427 R hypothetical protein complement(2541167..2541427) Psychrobacter arcticus 273-4 3516043 YP_265348.1 CDS thrB NC_007204.1 2541481 2542656 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase complement(2541481..2542656) Psychrobacter arcticus 273-4 3516044 YP_265349.1 CDS hisF NC_007204.1 2542986 2543768 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2542986..2543768 Psychrobacter arcticus 273-4 3516045 YP_265350.1 CDS ribH NC_007204.1 2543959 2544480 D 6,7-dimethyl-8-ribityllumazine synthase 2543959..2544480 Psychrobacter arcticus 273-4 3516046 YP_265351.1 CDS nusB NC_007204.1 2544836 2545963 D NusB antitermination factor 2544836..2545963 Psychrobacter arcticus 273-4 3516047 YP_265352.1 CDS thiL NC_007204.1 2545966 2546997 D thiamine-monophosphate kinase 2545966..2546997 Psychrobacter arcticus 273-4 3516048 YP_265353.1 CDS pgpA NC_007204.1 2547001 2547579 D phosphatidylglycerophosphatase 2547001..2547579 Psychrobacter arcticus 273-4 3516049 YP_265354.1 CDS glmU NC_007204.1 2547763 2549139 D UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase 2547763..2549139 Psychrobacter arcticus 273-4 3516050 YP_265355.1 CDS glmS NC_007204.1 2549306 2551150 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 2549306..2551150 Psychrobacter arcticus 273-4 3516051 YP_265356.1 CDS Psyc_2075 NC_007204.1 2551648 2552256 D nickel-dependent hydrogenase cytochrome b-type subunit 2551648..2552256 Psychrobacter arcticus 273-4 3516052 YP_265357.1 CDS Psyc_2076 NC_007204.1 2552276 2552950 D OmpR family two-component transcriptional regulator 2552276..2552950 Psychrobacter arcticus 273-4 3516053 YP_265358.1 CDS Psyc_2077 NC_007204.1 2553009 2554472 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.766) with cleavage site probability 0.531 at residue 31; signal transduction histidine kinase sensor 2553009..2554472 Psychrobacter arcticus 273-4 3516054 YP_265359.1 CDS Psyc_2078 NC_007204.1 2554572 2555138 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.992) with cleavage site probability 0.797 at residue 35; hypothetical protein 2554572..2555138 Psychrobacter arcticus 273-4 3516055 YP_265360.1 CDS Psyc_2079 NC_007204.1 2555131 2555445 D hypothetical protein 2555131..2555445 Psychrobacter arcticus 273-4 3516056 YP_265361.1 CDS Psyc_2080 NC_007204.1 2555501 2556613 D ApbE family lipoprotein 2555501..2556613 Psychrobacter arcticus 273-4 3516057 YP_265362.1 CDS Psyc_2081 NC_007204.1 2556785 2557468 D hypothetical protein 2556785..2557468 Psychrobacter arcticus 273-4 3516058 YP_265363.1 CDS Psyc_2082 NC_007204.1 2557555 2558256 D possible integral membrane proteins: 5 TM domains; hypothetical protein 2557555..2558256 Psychrobacter arcticus 273-4 3516059 YP_265364.1 CDS Psyc_2083 NC_007204.1 2558347 2561457 R RND superfamily multidrug efflux system protein complement(2558347..2561457) Psychrobacter arcticus 273-4 3516060 YP_265365.1 CDS Psyc_2084 NC_007204.1 2561454 2562737 R This protein contains homology to the HlyD family secretion proteins (Pfam 00529) and the Membrane-fusion protein AcrA (COG0845). One transmembrane helix predicted.; RND efflux membrane fusion protein complement(2561454..2562737) Psychrobacter arcticus 273-4 3516061 YP_265366.1 CDS Psyc_2085 NC_007204.1 2563238 2565664 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(2563238..2565664) Psychrobacter arcticus 273-4 3516062 YP_265367.1 CDS Psyc_2086 NC_007204.1 2565835 2566716 D There are 9 addittional ORFs identical to this one.; IS4 family transposase 2565835..2566716 Psychrobacter arcticus 273-4 3516063 YP_265368.1 CDS Psyc_2087 NC_007204.1 2566972 2567976 D hypothetical protein 2566972..2567976 Psychrobacter arcticus 273-4 3516064 YP_265369.1 CDS Psyc_2088 NC_007204.1 2568252 2568839 R hypothetical protein complement(2568252..2568839) Psychrobacter arcticus 273-4 3516065 YP_265370.1 CDS argA NC_007204.1 2569228 2570550 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2569228..2570550 Psychrobacter arcticus 273-4 3516066 YP_265371.1 CDS Psyc_2090 NC_007204.1 2570676 2571407 R peptidyl-prolyl isomerase complement(2570676..2571407) Psychrobacter arcticus 273-4 3516067 YP_265372.1 CDS Psyc_2091 NC_007204.1 2571836 2573584 D Probable transmembrane protein: 11 TM domain; hypothetical protein 2571836..2573584 Psychrobacter arcticus 273-4 3516068 YP_265373.1 CDS Psyc_2092 NC_007204.1 2574267 2575064 D short-chain dehydrogenase 2574267..2575064 Psychrobacter arcticus 273-4 3516069 YP_265374.1 CDS Psyc_2093 NC_007204.1 2575345 2576079 R This protein contains an acyltransferase domain (PFam 01553). This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. RBS found.; hypothetical protein complement(2575345..2576079) Psychrobacter arcticus 273-4 3516070 YP_265375.1 CDS parE NC_007204.1 2576187 2578073 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(2576187..2578073) Psychrobacter arcticus 273-4 3516071 YP_265376.1 CDS Psyc_2095 NC_007204.1 2578213 2578869 R This protein contains an esterase/lipase/thioesterase active site (COG3150). RBS found.; hypothetical protein complement(2578213..2578869) Psychrobacter arcticus 273-4 3516072 YP_265377.1 CDS Psyc_2096 NC_007204.1 2579057 2579317 D hypothetical protein 2579057..2579317 Psychrobacter arcticus 273-4 3516073 YP_265378.1 CDS Psyc_2097 NC_007204.1 2579400 2579708 D hypothetical protein 2579400..2579708 Psychrobacter arcticus 273-4 3516074 YP_265379.1 CDS thrS NC_007204.1 2592265 2594199 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2592265..2594199 Psychrobacter arcticus 273-4 3516085 YP_265380.1 CDS infC NC_007204.1 2594223 2594726 D translation initiation factor 3 2594223..2594726 Psychrobacter arcticus 273-4 3516086 YP_265381.1 CDS Psyc_2100 NC_007204.1 2595088 2596332 D hypothetical protein 2595088..2596332 Psychrobacter arcticus 273-4 3516087 YP_265382.1 CDS vacB NC_007204.1 2596480 2598795 D Its paralog in E. coli and H.influenzae is designated exoribonuclease II (Rnb). Both are Both these proteins share domain-level similarity (RNB, S1) with a considerable number of other proteins, and full-length similarity scoring below the trusted cutoff; RNAse R 2596480..2598795 Psychrobacter arcticus 273-4 3516088 YP_265383.1 CDS Psyc_2102 NC_007204.1 2599029 2599349 R COG3415; transposase and inactivated derivatives complement(2599029..2599349) Psychrobacter arcticus 273-4 3516089 YP_265384.1 CDS hisA NC_007204.1 2599577 2600317 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(2599577..2600317) Psychrobacter arcticus 273-4 3516090 YP_265385.1 CDS Psyc_2104 NC_007204.1 2601248 2602600 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 2601248..2602600 Psychrobacter arcticus 273-4 3516091 YP_265386.1 CDS nqrB NC_007204.1 2602606 2603841 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 2602606..2603841 Psychrobacter arcticus 273-4 3516092 YP_265387.1 CDS nqrC NC_007204.1 2603822 2604754 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 2603822..2604754 Psychrobacter arcticus 273-4 3516093 YP_265388.1 CDS nqrD NC_007204.1 2604756 2605427 D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 2604756..2605427 Psychrobacter arcticus 273-4 3516094 YP_265389.1 CDS nqrE NC_007204.1 2605427 2606035 D Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 2605427..2606035 Psychrobacter arcticus 273-4 3516095 YP_265390.1 CDS nqrF NC_007204.1 2606159 2607394 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 2606159..2607394 Psychrobacter arcticus 273-4 3516096 YP_265391.1 CDS apbE NC_007204.1 2607790 2608938 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.970) with cleavage site probability 0.607 at residue 41; thiamine biosynthesis lipoprotein 2607790..2608938 Psychrobacter arcticus 273-4 3516097 YP_265392.1 CDS Psyc_2111 NC_007204.1 2609102 2609347 D hypothetical protein 2609102..2609347 Psychrobacter arcticus 273-4 3516098 YP_265393.1 CDS cynX NC_007204.1 2609631 2610941 D 12 TM domains present; MFS cyanate efflux pump, CynX 2609631..2610941 Psychrobacter arcticus 273-4 3516099 YP_265394.1 CDS Psyc_2113 NC_007204.1 2611032 2611844 D Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.938) with cleavage site probability 0.522 at residue 30; lipolytic protein 2611032..2611844 Psychrobacter arcticus 273-4 3516100 YP_265395.1 CDS Psyc_2114 NC_007204.1 2611841 2612530 D efflux ABC transporter ATPase subunit 2611841..2612530 Psychrobacter arcticus 273-4 3516101 YP_265396.1 CDS Psyc_2115 NC_007204.1 2612530 2615178 D Possible transmembrane protein: 10 TM domains; possible lipid exporter; efflux ABC transporter inner membrane protein 2612530..2615178 Psychrobacter arcticus 273-4 3516102 YP_265397.1 CDS Psyc_2116 NC_007204.1 2615205 2615720 R hypothetical protein complement(2615205..2615720) Psychrobacter arcticus 273-4 3516103 YP_265398.1 CDS Psyc_2117 NC_007204.1 2615721 2616572 R hypothetical protein complement(2615721..2616572) Psychrobacter arcticus 273-4 3516104 YP_265399.1 CDS avtA NC_007204.1 2617101 2618432 D transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 2617101..2618432 Psychrobacter arcticus 273-4 3516105 YP_265400.1 CDS Psyc_2119 NC_007204.1 2618497 2618871 R hypothetical protein complement(2618497..2618871) Psychrobacter arcticus 273-4 3516106 YP_265401.1 CDS hisH NC_007204.1 2619050 2619694 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(2619050..2619694) Psychrobacter arcticus 273-4 3516107 YP_265402.1 CDS hisB NC_007204.1 2619695 2620360 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(2619695..2620360) Psychrobacter arcticus 273-4 3516108 YP_265403.1 CDS Psyc_2122 NC_007204.1 2620668 2621090 D hypothetical protein 2620668..2621090 Psychrobacter arcticus 273-4 3516109 YP_265404.1 CDS Psyc_2123 NC_007204.1 2621469 2621969 D hypothetical protein 2621469..2621969 Psychrobacter arcticus 273-4 3516111 YP_265405.1 CDS gph NC_007204.1 2622067 2622759 D catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 2622067..2622759 Psychrobacter arcticus 273-4 3516112 YP_265406.1 CDS Psyc_2125 NC_007204.1 2622772 2624322 R These proteins are a subset of the magnesium chelatase, ChlI subunit family, also called:hypothetical protein yifB and competence protein.; magnesium chelatase-related protein complement(2622772..2624322) Psychrobacter arcticus 273-4 3516113 YP_265407.1 CDS hemN NC_007204.1 2624627 2626171 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2624627..2626171 Psychrobacter arcticus 273-4 3516114 YP_265408.1 CDS Psyc_2127 NC_007204.1 2626452 2627312 R hypothetical protein complement(2626452..2627312) Psychrobacter arcticus 273-4 3516115 YP_265409.1 CDS Psyc_2128 NC_007204.1 2627328 2627825 R This protein contains a SURF1 domain and may be a membrane protein implicated in the regulation of membrane protease activity(COG1585). Two transmembrane helices predicted. RBS found.; hypothetical protein complement(2627328..2627825) Psychrobacter arcticus 273-4 3516116 YP_265410.1 CDS Psyc_2129 NC_007204.1 2628250 2628891 R OmpA family protein complement(2628250..2628891) Psychrobacter arcticus 273-4 3516117 YP_265411.1 CDS bioF NC_007204.1 2629098 2630330 D 8-amino-7-oxononanoate synthase 2629098..2630330 Psychrobacter arcticus 273-4 3516118 YP_265412.1 CDS bioC NC_007204.1 2630408 2631232 D biotin synthesis protein 2630408..2631232 Psychrobacter arcticus 273-4 3516119 YP_265413.1 CDS dnaK NC_007204.1 2631349 2633292 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(2631349..2633292) Psychrobacter arcticus 273-4 3516120 YP_265414.1 CDS Psyc_2133 NC_007204.1 2633587 2634186 R HSP70 family protein GrpE complement(2633587..2634186) Psychrobacter arcticus 273-4 3516121 YP_265415.1 CDS Psyc_2134 NC_007204.1 2634846 2635490 R This protein contains a yrdC domain that has been shown to preferentially bind to dsRNA (PFAM 01300). RBS found.; Citation: Teplova M, Tereshko V, Sanishvili R, Joachimiak A, Bushueva T, Anderson WF, Egli M. 2000. The structure of the yrdC gene product from Escherichia coli reveals a new fold and suggests a role in RNA binding. Protein Sci. 9(12):2557-66.; hypothetical protein complement(2634846..2635490) Psychrobacter arcticus 273-4 3516122 YP_265416.1 CDS dprA NC_007204.1 2635812 2637029 R DNA processing protein complement(2635812..2637029) Psychrobacter arcticus 273-4 3516123 YP_265417.1 CDS Psyc_2136 NC_007204.1 2637087 2638220 R This protein contains a LysM (lysin motif) domain. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. Signal peptide predicted. RBS found.; hypothetical protein complement(2637087..2638220) Psychrobacter arcticus 273-4 3516124 YP_265418.1 CDS thrC NC_007204.1 2638533 2639954 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2638533..2639954) Psychrobacter arcticus 273-4 3516125 YP_265419.1 CDS Psyc_2138 NC_007204.1 2640011 2641585 R This protein contains a NusB domain (involved in the regulation of rRNA biosynthesisby transcriptional antitermination, PFAM 01029) and a Sun protein domain (unknown function, PFAM 01189). RBS found.; hypothetical protein complement(2640011..2641585) Psychrobacter arcticus 273-4 3516126 YP_265420.1 CDS fmt NC_007204.1 2641656 2642741 R methionyl-tRNA formyltransferase complement(2641656..2642741) Psychrobacter arcticus 273-4 3516127 YP_265421.1 CDS ribE NC_007204.1 2642977 2643648 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(2642977..2643648) Psychrobacter arcticus 273-4 3516128 YP_265422.1 CDS ribD NC_007204.1 2644038 2645093 R diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase complement(2644038..2645093) Psychrobacter arcticus 273-4 3516129 YP_265423.1 CDS nrdR NC_007204.1 2645192 2645650 R This protein contains an ATP cone domain (PFAM03477)that is an ATP-binding regulatory domain. RBS found.; transcriptional regulator NrdR complement(2645192..2645650) Psychrobacter arcticus 273-4 3516130 YP_265424.1 CDS trmE NC_007204.1 2645739 2647175 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(2645739..2647175) Psychrobacter arcticus 273-4 3516131 YP_265425.1 CDS Psyc_2144 NC_007204.1 2647569 2649266 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(2647569..2649266) Psychrobacter arcticus 273-4 3516132 YP_265426.1 CDS Psyc_2145 NC_007204.1 2649484 2649858 R hypothetical protein complement(2649484..2649858) Psychrobacter arcticus 273-4 3516133 YP_265427.1 CDS rnpA NC_007204.1 2649860 2650231 R In bacteria RNase P is known to be composed of two components: a large (about 400 base pairs) RNA (gene rnpB) and a small protein (119 to 133 amino acids) (gene rnpA).; ribonuclease P protein component complement(2649860..2650231) Psychrobacter arcticus 273-4 3516134 YP_265428.1 CDS rpmH NC_007204.1 2650418 2650552 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(2650418..2650552) Psychrobacter arcticus 273-4 3516135 Psyc_R0001 tRNA Psyc_R0001 NC_007204.1 74634 74717 D tRNA-Leu 74634..74717 Psychrobacter arcticus 273-4 3514153 Psyc_R0002 tRNA Psyc_R0002 NC_007204.1 74842 74918 D tRNA-Met 74842..74918 Psychrobacter arcticus 273-4 3514154 Psyc_R0003 tRNA Psyc_R0003 NC_007204.1 194905 194994 D tRNA-Ser 194905..194994 Psychrobacter arcticus 273-4 3515128 Psyc_R0004 tRNA Psyc_R0004 NC_007204.1 195179 195255 D tRNA-Arg 195179..195255 Psychrobacter arcticus 273-4 3515129 Psyc_R0005 tRNA Psyc_R0005 NC_007204.1 199763 199838 R tRNA-Gln complement(199763..199838) Psychrobacter arcticus 273-4 3514208 Psyc_R0006 tRNA Psyc_R0006 NC_007204.1 200082 200157 R tRNA-Gln complement(200082..200157) Psychrobacter arcticus 273-4 3514209 Psyc_R0007 tRNA Psyc_R0007 NC_007204.1 269965 270041 D tRNA-Pro 269965..270041 Psychrobacter arcticus 273-4 3514708 Psyc_R0008 tRNA Psyc_R0008 NC_007204.1 270136 270212 D tRNA-Arg 270136..270212 Psychrobacter arcticus 273-4 3514709 Psyc_R0009 tRNA Psyc_R0009 NC_007204.1 270252 270327 D tRNA-His 270252..270327 Psychrobacter arcticus 273-4 3514710 Psyc_R0011 tRNA Psyc_R0011 NC_007204.1 408595 408671 D tRNA-Met 408595..408671 Psychrobacter arcticus 273-4 3515046 Psyc_R0012 tRNA Psyc_R0012 NC_007204.1 478244 478319 D tRNA-Thr 478244..478319 Psychrobacter arcticus 273-4 3514452 Psyc_R0013 tRNA Psyc_R0013 NC_007204.1 478385 478468 D tRNA-Tyr 478385..478468 Psychrobacter arcticus 273-4 3513984 Psyc_R0014 tRNA Psyc_R0014 NC_007204.1 478555 478628 D tRNA-Gly 478555..478628 Psychrobacter arcticus 273-4 3513985 Psyc_R0015 tRNA Psyc_R0015 NC_007204.1 478733 478807 D tRNA-Thr 478733..478807 Psychrobacter arcticus 273-4 3513986 Psyc_R0016 tRNA Psyc_R0016 NC_007204.1 531612 531688 R tRNA-Arg complement(531612..531688) Psychrobacter arcticus 273-4 3515077 Psyc_R0017 tRNA Psyc_R0017 NC_007204.1 585389 585465 R tRNA-Pro complement(585389..585465) Psychrobacter arcticus 273-4 3514432 Psyc_R0019 tRNA Psyc_R0019 NC_007204.1 662172 662248 D tRNA-Ile 662172..662248 Psychrobacter arcticus 273-4 3514497 Psyc_R0020 tRNA Psyc_R0020 NC_007204.1 662255 662330 D tRNA-Ala 662255..662330 Psychrobacter arcticus 273-4 3514498 Psyc_R0023 tRNA Psyc_R0023 NC_007204.1 674476 674551 R tRNA-Lys complement(674476..674551) Psychrobacter arcticus 273-4 3514458 Psyc_R0024 tRNA Psyc_R0024 NC_007204.1 674708 674783 R tRNA-Lys complement(674708..674783) Psychrobacter arcticus 273-4 3514459 Psyc_R0025 tRNA Psyc_R0025 NC_007204.1 856996 857071 D tRNA-Val 856996..857071 Psychrobacter arcticus 273-4 3514563 Psyc_R0026 tRNA Psyc_R0026 NC_007204.1 857126 857202 D tRNA-Asp 857126..857202 Psychrobacter arcticus 273-4 3514564 Psyc_R0027 tRNA Psyc_R0027 NC_007204.1 881169 881244 R tRNA-Asn complement(881169..881244) Psychrobacter arcticus 273-4 3514585 Psyc_R0028 tRNA Psyc_R0028 NC_007204.1 1025594 1025668 R tRNA-Gly complement(1025594..1025668) Psychrobacter arcticus 273-4 3514857 Psyc_R0029 tRNA Psyc_R0029 NC_007204.1 1060465 1060551 R tRNA-Leu complement(1060465..1060551) Psychrobacter arcticus 273-4 3514887 Psyc_R0031 tRNA Psyc_R0031 NC_007204.1 1190834 1190909 D tRNA-OTHER 1190834..1190909 Psychrobacter arcticus 273-4 3514997 Psyc_R0032 tRNA Psyc_R0032 NC_007204.1 1353903 1353978 D tRNA-Arg 1353903..1353978 Psychrobacter arcticus 273-4 3514829 Psyc_R0033 tRNA Psyc_R0033 NC_007204.1 1653280 1653356 D tRNA-Met 1653280..1653356 Psychrobacter arcticus 273-4 3515327 Psyc_R0034 tRNA Psyc_R0034 NC_007204.1 1749931 1750004 D tRNA-Cys 1749931..1750004 Psychrobacter arcticus 273-4 3515403 Psyc_R0035 tRNA Psyc_R0035 NC_007204.1 1750129 1750215 D tRNA-Leu 1750129..1750215 Psychrobacter arcticus 273-4 3515404 Psyc_R0037 tRNA Psyc_R0037 NC_007204.1 1883491 1883575 D tRNA-Leu 1883491..1883575 Psychrobacter arcticus 273-4 3515500 Psyc_R0038 tRNA Psyc_R0038 NC_007204.1 1902310 1902385 D tRNA-Val 1902310..1902385 Psychrobacter arcticus 273-4 3515514 Psyc_R0039 tRNA Psyc_R0039 NC_007204.1 1902440 1902516 D tRNA-Asp 1902440..1902516 Psychrobacter arcticus 273-4 3515515 Psyc_R0040 tRNA Psyc_R0040 NC_007204.1 1936394 1936470 D tRNA-Val 1936394..1936470 Psychrobacter arcticus 273-4 3515544 Psyc_R0041 tRNA Psyc_R0041 NC_007204.1 1986862 1986937 D tRNA-Asn 1986862..1986937 Psychrobacter arcticus 273-4 3515574 Psyc_R0042 tRNA Psyc_R0042 NC_007204.1 1987941 1988031 R tRNA-Ser complement(1987941..1988031) Psychrobacter arcticus 273-4 3515576 Psyc_R0043 tRNA Psyc_R0043 NC_007204.1 2019984 2020059 D tRNA-Glu 2019984..2020059 Psychrobacter arcticus 273-4 3515601 Psyc_R0044 tRNA Psyc_R0044 NC_007204.1 2195847 2195921 R tRNA-Gly complement(2195847..2195921) Psychrobacter arcticus 273-4 3515751 Psyc_R0045 tRNA Psyc_R0045 NC_007204.1 2337947 2338022 R tRNA-Trp complement(2337947..2338022) Psychrobacter arcticus 273-4 3515863 Psyc_R0048 tRNA Psyc_R0048 NC_007204.1 2423925 2424000 R tRNA-Ala complement(2423925..2424000) Psychrobacter arcticus 273-4 3515937 Psyc_R0049 tRNA Psyc_R0049 NC_007204.1 2424007 2424083 R tRNA-Ile complement(2424007..2424083) Psychrobacter arcticus 273-4 3515938 Psyc_R0051 tRNA Psyc_R0051 NC_007204.1 2517802 2517892 D tRNA-Ser 2517802..2517892 Psychrobacter arcticus 273-4 3516022 Psyc_R0052 tRNA Psyc_R0052 NC_007204.1 2532760 2532835 D tRNA-Ala 2532760..2532835 Psychrobacter arcticus 273-4 3516034 Psyc_R0053 tRNA Psyc_R0053 NC_007204.1 2532993 2533068 D tRNA-Glu 2532993..2533068 Psychrobacter arcticus 273-4 3516035 Psyc_R0056 tRNA Psyc_R0056 NC_007204.1 2583374 2583449 R tRNA-Ala complement(2583374..2583449) Psychrobacter arcticus 273-4 3516077 Psyc_R0057 tRNA Psyc_R0057 NC_007204.1 2583456 2583532 R tRNA-Ile complement(2583456..2583532) Psychrobacter arcticus 273-4 3516078 Psyc_R0061 tRNA Psyc_R0061 NC_007204.1 2589480 2589555 R tRNA-Ala complement(2589480..2589555) Psychrobacter arcticus 273-4 3516082 Psyc_R0062 tRNA Psyc_R0062 NC_007204.1 2589562 2589638 R tRNA-Ile complement(2589562..2589638) Psychrobacter arcticus 273-4 3516083 Psyc_R0064 tRNA Psyc_R0064 NC_007204.1 2621213 2621288 D tRNA-Phe 2621213..2621288 Psychrobacter arcticus 273-4 3516110 Psyc_R0018 rRNA Psyc_R0018 NC_007204.1 660502 662086 D 16S ribosomal RNA 660502..662086 Psychrobacter arcticus 273-4 3514496 Psyc_R0021 rRNA Psyc_R0021 NC_007204.1 662680 665443 D 23S ribosomal RNA 662680..665443 Psychrobacter arcticus 273-4 3514499 Psyc_R0022 rRNA Psyc_R0022 NC_007204.1 665722 665823 D 5S ribosomal RNA 665722..665823 Psychrobacter arcticus 273-4 3514500 Psyc_R0046 rRNA Psyc_R0046 NC_007204.1 2420420 2420533 R 5S ribosomal RNA complement(2420420..2420533) Psychrobacter arcticus 273-4 3515935 Psyc_R0047 rRNA Psyc_R0047 NC_007204.1 2420812 2423575 R 23S ribosomal RNA complement(2420812..2423575) Psychrobacter arcticus 273-4 3515936 Psyc_R0050 rRNA Psyc_R0050 NC_007204.1 2424144 2425753 R 16S ribosomal RNA complement(2424144..2425753) Psychrobacter arcticus 273-4 3515939 Psyc_R0054 rRNA Psyc_R0054 NC_007204.1 2579869 2579982 R 5S ribosomal RNA complement(2579869..2579982) Psychrobacter arcticus 273-4 3516075 Psyc_R0055 rRNA Psyc_R0055 NC_007204.1 2580261 2583024 R 23S ribosomal RNA complement(2580261..2583024) Psychrobacter arcticus 273-4 3516076 Psyc_R0058 rRNA Psyc_R0058 NC_007204.1 2583593 2585202 R 16S ribosomal RNA complement(2583593..2585202) Psychrobacter arcticus 273-4 3516079 Psyc_R0059 rRNA Psyc_R0059 NC_007204.1 2585975 2586088 R 5S ribosomal RNA complement(2585975..2586088) Psychrobacter arcticus 273-4 3516080 Psyc_R0060 rRNA Psyc_R0060 NC_007204.1 2586367 2589130 R 23S ribosomal RNA complement(2586367..2589130) Psychrobacter arcticus 273-4 3516081 Psyc_R0063 rRNA Psyc_R0063 NC_007204.1 2589699 2591308 R 16S ribosomal RNA complement(2589699..2591308) Psychrobacter arcticus 273-4 3516084