-- dump date 20140620_022808 -- class Genbank::CDS -- table cds_note -- id note YP_005399840.1 COG0593 ATPase involved in DNA replication initiation YP_005399841.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005399842.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005399843.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005399844.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005399845.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005399846.1 COG5645 Predicted periplasmic lipoprotein YP_005399847.1 COG0071 Molecular chaperone (small heat shock protein) YP_005399848.1 COG0071 Molecular chaperone (small heat shock protein) YP_005399850.1 COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase YP_005399852.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005399853.1 COG0477 Permeases of the major facilitator superfamily YP_005399855.1 COG1609 Transcriptional regulators YP_005399856.1 COG0477 Permeases of the major facilitator superfamily YP_005399857.1 COG3345 Alpha-galactosidase YP_005399858.1 COG1609 Transcriptional regulators YP_005399859.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005399860.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005399861.1 COG2818 3-methyladenine DNA glycosylase YP_005399862.1 COG3240 Phospholipase/lecithinase/hemolysin YP_005399863.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005399864.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_005399865.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005399866.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005399868.1 COG1651 Protein-disulfide isomerase YP_005399870.1 COG0237 Dephospho-CoA kinase YP_005399871.1 COG2213 Phosphotransferase system, mannitol-specific IIBC component YP_005399872.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_005399873.1 COG3722 Transcriptional regulator YP_005399874.1 COG1280 Putative threonine efflux protein YP_005399875.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005399877.1 COG2258 Uncharacterized protein conserved in bacteria YP_005399878.1 COG0840 Methyl-accepting chemotaxis protein YP_005399879.1 COG0605 Superoxide dismutase YP_005399880.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_005399881.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005399882.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_005399883.1 COG2864 Cytochrome b subunit of formate dehydrogenase YP_005399884.1 COG3058 Uncharacterized protein involved in formate dehydrogenase formation YP_005399885.1 COG0625 Glutathione S-transferase YP_005399886.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005399887.1 COG0477 Permeases of the major facilitator superfamily YP_005399888.1 COG3274 Uncharacterized protein conserved in bacteria YP_005399889.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_005399890.1 COG1335 Amidases related to nicotinamidase YP_005399891.1 COG0693 Putative intracellular protease/amidase YP_005399892.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005399893.1 COG3135 Uncharacterized protein involved in benzoate metabolism YP_005399894.1 COG1396 Predicted transcriptional regulators YP_005399895.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005399896.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005399898.1 COG0625 Glutathione S-transferase YP_005399899.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005399900.1 COG1280 Putative threonine efflux protein YP_005399902.1 COG2261 Predicted membrane protein YP_005399906.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_005399907.1 COG4674 Uncharacterized ABC-type transport system, ATPase component YP_005399908.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_005399909.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_005399910.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_005399911.1 COG1802 Transcriptional regulators YP_005399912.1 COG0439 Biotin carboxylase YP_005399913.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005399915.1 COG3668 Plasmid stabilization system protein YP_005399916.1 COG2267 Lysophospholipase YP_005399917.1 COG1846 Transcriptional regulators YP_005399918.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005399919.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005399921.1 COG2002 Regulators of stationary/sporulation gene expression YP_005399923.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_005399924.1 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005399925.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005399926.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005399927.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005399928.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005399929.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005399930.1 COG0583 Transcriptional regulator YP_005399931.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005399932.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005399933.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005399934.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005399935.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005399936.1 COG3547 Transposase and inactivated derivatives YP_005399937.1 COG2184 Protein involved in cell division YP_005399938.1 COG1396 Predicted transcriptional regulators YP_005399939.1 COG3405 Endoglucanase Y YP_005399941.1 COG0457 FOG: TPR repeat YP_005399943.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_005399944.1 COG1192 ATPases involved in chromosome partitioning YP_005399946.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_005399947.1 COG1301 Na+/H+-dicarboxylate symporters YP_005399948.1 COG0612 Predicted Zn-dependent peptidases YP_005399949.1 COG0524 Sugar kinases, ribokinase family YP_005399950.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005399951.1 COG2200 FOG: EAL domain YP_005399952.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_005399953.1 COG2134 CDP-diacylglycerol pyrophosphatase YP_005399954.1 COG0477 Permeases of the major facilitator superfamily YP_005399955.1 COG1295 Predicted membrane protein YP_005399956.1 COG0583 Transcriptional regulator YP_005399957.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005399958.1 COG5581 Predicted glycosyltransferase YP_005399959.1 COG3038 Cytochrome B561 YP_005399960.1 COG0457 FOG: TPR repeat YP_005399961.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005399963.1 COG0579 Predicted dehydrogenase YP_005399964.1 COG3501 Uncharacterized protein conserved in bacteria YP_005399969.1 COG0579 Predicted dehydrogenase YP_005399970.1 COG0531 Amino acid transporters YP_005399971.1 COG2731 Beta-galactosidase, beta subunit YP_005399972.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_005399973.1 COG1609 Transcriptional regulators YP_005399975.1 COG3408 Glycogen debranching enzyme YP_005399976.1 COG1457 Purine-cytosine permease and related proteins YP_005399977.1 COG1357 Uncharacterized low-complexity proteins YP_005399978.1 COG0339 Zn-dependent oligopeptidases YP_005399979.1 COG2169 Adenosine deaminase YP_005399980.1 COG2513 PEP phosphonomutase and related enzymes YP_005399981.1 COG0477 Permeases of the major facilitator superfamily YP_005399982.1 COG4748 Uncharacterized conserved protein YP_005399983.1 COG1309 Transcriptional regulator YP_005399984.1 COG0477 Permeases of the major facilitator superfamily YP_005399985.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005399986.1 COG3146 Uncharacterized protein conserved in bacteria YP_005399987.1 COG0288 Carbonic anhydrase YP_005399988.1 COG0225 Peptide methionine sulfoxide reductase YP_005399989.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005399990.1 COG0457 FOG: TPR repeat YP_005399991.1 COG3037 Uncharacterized protein conserved in bacteria YP_005399992.1 COG3414 Phosphotransferase system, galactitol-specific IIB component YP_005399993.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005399994.1 COG0645 Predicted kinase YP_005399995.1 COG3684 Tagatose-1,6-bisphosphate aldolase YP_005399996.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_005399998.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005399999.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005400000.1 COG1335 Amidases related to nicotinamidase YP_005400001.1 COG2259 Predicted membrane protein YP_005400002.1 COG0477 Permeases of the major facilitator superfamily YP_005400003.1 COG0583 Transcriptional regulator YP_005400004.1 COG3224 Uncharacterized protein conserved in bacteria YP_005400005.1 COG0322 Nuclease subunit of the excinuclease complex YP_005400007.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005400008.1 COG2961 Protein involved in catabolism of external DNA YP_005400009.1 COG0339 Zn-dependent oligopeptidases YP_005400010.1 COG0500 SAM-dependent methyltransferases YP_005400011.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005400013.1 COG0306 Phosphate/sulphate permeases YP_005400014.1 COG2081 Predicted flavoproteins YP_005400016.1 COG0840 Methyl-accepting chemotaxis protein YP_005400018.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005400019.1 COG3176 Putative hemolysin YP_005400020.1 COG0477 Permeases of the major facilitator superfamily YP_005400021.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005400024.1 COG1741 Pirin-related protein YP_005400025.1 COG3468 Type V secretory pathway, adhesin AidA YP_005400026.1 COG1440 Phosphotransferase system cellobiose-specific component IIB YP_005400027.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005400028.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005400029.1 COG1609 Transcriptional regulators YP_005400030.1 COG1609 Transcriptional regulators YP_005400031.1 COG3265 Gluconate kinase YP_005400032.1 COG2610 H+/gluconate symporter and related permeases YP_005400033.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_005400034.1 COG2944 Predicted transcriptional regulator YP_005400035.1 COG2095 Multiple antibiotic transporter YP_005400036.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005400037.1 COG0296 1,4-alpha-glucan branching enzyme YP_005400038.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_005400039.1 COG0448 ADP-glucose pyrophosphorylase YP_005400040.1 COG0297 Glycogen synthase YP_005400041.1 COG0058 Glucan phosphorylase YP_005400042.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_005400043.1 COG1349 Transcriptional regulators of sugar metabolism YP_005400044.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_005400045.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_005400047.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005400048.1 COG0607 Rhodanese-related sulfurtransferase YP_005400049.1 COG1349 Transcriptional regulators of sugar metabolism YP_005400050.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005400051.1 COG3037 Uncharacterized protein conserved in bacteria YP_005400052.1 COG3414 Phosphotransferase system, galactitol-specific IIB component YP_005400053.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005400054.1 COG0269 3-hexulose-6-phosphate synthase and related proteins YP_005400055.1 COG3623 Putative L-xylulose-5-phosphate 3-epimerase YP_005400056.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005400057.1 COG0058 Glucan phosphorylase YP_005400058.1 COG1640 4-alpha-glucanotransferase YP_005400059.1 COG0316 Uncharacterized conserved protein YP_005400060.1 COG1040 Predicted amidophosphoribosyltransferases YP_005400061.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005400063.1 COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase YP_005400064.1 COG1767 Triphosphoribosyl-dephospho-CoA synthetase YP_005400065.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005400066.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_005400067.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005400068.1 COG0679 Predicted permeases YP_005400070.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005400073.1 COG0583 Transcriptional regulator YP_005400075.1 COG0370 Fe2+ transport system protein B YP_005400076.1 COG1918 Fe2+ transport system protein A YP_005400077.1 COG2183 Transcriptional accessory protein YP_005400078.1 COG0782 Transcription elongation factor YP_005400079.1 COG2373 Large extracellular alpha-helical protein YP_005400080.1 COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC YP_005400081.1 COG3539 P pilus assembly protein, pilin FimA YP_005400082.1 COG3188 P pilus assembly protein, porin PapC YP_005400083.1 COG3121 P pilus assembly protein, chaperone PapD YP_005400084.1 COG3539 P pilus assembly protein, pilin FimA YP_005400085.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005400086.1 COG0642 Signal transduction histidine kinase YP_005400087.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005400088.1 COG4691 Plasmid stability protein YP_005400089.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_005400090.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_005400091.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_005400092.1 COG1011 Predicted hydrolase (HAD superfamily) YP_005400094.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005400095.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_005400097.1 COG3166 Tfp pilus assembly protein PilN YP_005400099.1 COG4796 Type II secretory pathway, component HofQ YP_005400100.1 COG0703 Shikimate kinase YP_005400101.1 COG0337 3-dehydroquinate synthetase YP_005400102.1 COG3266 Uncharacterized protein conserved in bacteria YP_005400103.1 COG0338 Site-specific DNA methylase YP_005400104.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005400105.1 COG0546 Predicted phosphatases YP_005400106.1 COG0180 Tryptophanyl-tRNA synthetase YP_005400107.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_005400108.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_005400109.1 COG1251 NAD(P)H-nitrite reductase YP_005400110.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005400111.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005400112.1 COG0433 Predicted ATPase YP_005400115.1 COG2184 Protein involved in cell division YP_005400116.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005400117.1 COG4992 Ornithine/acetylornithine aminotransferase YP_005400118.1 COG1289 Predicted membrane protein YP_005400119.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_005400120.1 COG1765 Predicted redox protein, regulator of disulfide bond formation YP_005400121.1 COG3954 Phosphoribulokinase YP_005400122.1 COG0583 Transcriptional regulator YP_005400123.1 COG3194 Ureidoglycolate hydrolase YP_005400124.1 COG1414 Transcriptional regulator YP_005400125.1 COG3960 Glyoxylate carboligase YP_005400126.1 COG3622 Hydroxypyruvate isomerase YP_005400127.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005400128.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_005400129.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005400130.1 COG2233 Xanthine/uracil permeases YP_005400131.1 COG1929 Glycerate kinase YP_005400132.1 COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization YP_005400133.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005400134.1 COG2055 Malate/L-lactate dehydrogenases YP_005400135.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_005400138.1 COG0549 Carbamate kinase YP_005400139.1 COG3089 Uncharacterized protein conserved in bacteria YP_005400140.1 COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold YP_005400141.1 COG1280 Putative threonine efflux protein YP_005400142.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005400143.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005400144.1 COG0475 Kef-type K+ transport systems, membrane components YP_005400145.1 COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain YP_005400146.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_005400147.1 COG3385 FOG: Transposase and inactivated derivatives YP_005400148.1 COG2900 Uncharacterized protein conserved in bacteria YP_005400149.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005400150.1 COG2964 Uncharacterized protein conserved in bacteria YP_005400151.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction YP_005400152.1 COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur YP_005400153.1 COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur YP_005400154.1 COG0048 Ribosomal protein S12 YP_005400155.1 COG0049 Ribosomal protein S7 YP_005400156.1 COG0480 Translation elongation factors (GTPases) YP_005400157.1 COG0050 GTPases - translation elongation factors YP_005400158.1 COG2906 Bacterioferritin-associated ferredoxin YP_005400159.1 COG2193 Bacterioferritin (cytochrome b1) YP_005400160.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_005400161.1 COG3149 Type II secretory pathway, component PulM YP_005400162.1 COG3156 Type II secretory pathway, component PulK YP_005400163.1 COG4795 Type II secretory pathway, component PulJ YP_005400164.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_005400165.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_005400166.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_005400167.1 COG1459 Type II secretory pathway, component PulF YP_005400168.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_005400169.1 COG1450 Type II secretory pathway, component PulD YP_005400170.1 COG3031 Type II secretory pathway, component PulC YP_005400171.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_005400173.1 COG0051 Ribosomal protein S10 YP_005400174.1 COG0087 Ribosomal protein L3 YP_005400175.1 COG0088 Ribosomal protein L4 YP_005400176.1 COG0089 Ribosomal protein L23 YP_005400177.1 COG0090 Ribosomal protein L2 YP_005400178.1 COG0185 Ribosomal protein S19 YP_005400179.1 COG0091 Ribosomal protein L22 YP_005400180.1 COG0092 Ribosomal protein S3 YP_005400181.1 COG0197 Ribosomal protein L16/L10E YP_005400182.1 COG0255 Ribosomal protein L29 YP_005400183.1 COG0186 Ribosomal protein S17 YP_005400184.1 COG0093 Ribosomal protein L14 YP_005400185.1 COG0198 Ribosomal protein L24 YP_005400186.1 COG0094 Ribosomal protein L5 YP_005400187.1 COG0199 Ribosomal protein S14 YP_005400188.1 COG0096 Ribosomal protein S8 YP_005400189.1 COG0097 Ribosomal protein L6P/L9E YP_005400190.1 COG0256 Ribosomal protein L18 YP_005400191.1 COG0098 Ribosomal protein S5 YP_005400192.1 COG1841 Ribosomal protein L30/L7E YP_005400193.1 COG0200 Ribosomal protein L15 YP_005400194.1 COG0201 Preprotein translocase subunit SecY YP_005400195.1 COG0257 Ribosomal protein L36 YP_005400196.1 COG0099 Ribosomal protein S13 YP_005400197.1 COG0100 Ribosomal protein S11 YP_005400198.1 COG0522 Ribosomal protein S4 and related proteins YP_005400199.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005400200.1 COG0203 Ribosomal protein L17 YP_005400201.1 COG0461 Orotate phosphoribosyltransferase YP_005400202.1 COG0789 Predicted transcriptional regulators YP_005400203.1 COG3036 Uncharacterized protein conserved in bacteria YP_005400204.1 COG1970 Large-conductance mechanosensitive channel YP_005400205.1 COG0569 K+ transport systems, NAD-binding component YP_005400206.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_005400207.1 COG0223 Methionyl-tRNA formyltransferase YP_005400208.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005400209.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005400210.1 COG2922 Uncharacterized protein conserved in bacteria YP_005400211.1 COG0551 Zn-finger domain associated with topoisomerase type I YP_005400212.1 COG0009 Putative translation factor (SUA5) YP_005400213.1 COG0169 Shikimate 5-dehydrogenase YP_005400214.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_005400215.1 COG4147 Predicted symporter YP_005400216.1 COG3162 Predicted membrane protein YP_005400217.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005400218.1 COG3539 P pilus assembly protein, pilin FimA YP_005400219.1 COG3188 P pilus assembly protein, porin PapC YP_005400220.1 COG3121 P pilus assembly protein, chaperone PapD YP_005400222.1 COG1396 Predicted transcriptional regulators YP_005400224.1 COG3710 DNA-binding winged-HTH domains YP_005400225.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005400226.1 COG0477 Permeases of the major facilitator superfamily YP_005400227.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005400228.1 COG1309 Transcriptional regulator YP_005400229.1 COG4232 Thiol:disulfide interchange protein YP_005400230.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_005400231.1 COG1027 Aspartate ammonia-lyase YP_005400232.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_005400233.1 COG0234 Co-chaperonin GroES (HSP10) YP_005400234.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005400236.1 COG1509 Lysine 2,3-aminomutase YP_005400237.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005400238.1 COG5510 Predicted small secreted protein YP_005400240.1 COG3040 Bacterial lipocalin YP_005400241.1 COG3080 Fumarate reductase subunit D YP_005400242.1 COG3029 Fumarate reductase subunit C YP_005400243.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005400244.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005400245.1 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) YP_005400246.1 COG2233 Xanthine/uracil permeases YP_005400247.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005400248.1 COG3264 Small-conductance mechanosensitive channel YP_005400249.1 COG0688 Phosphatidylserine decarboxylase YP_005400250.1 COG1162 Predicted GTPases YP_005400251.1 COG1949 Oligoribonuclease (3'->5' exoribonuclease) YP_005400252.1 COG1600 Uncharacterized Fe-S protein YP_005400253.1 COG0062 Uncharacterized conserved protein YP_005400254.1 COG0802 Predicted ATPase or kinase YP_005400255.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005400256.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005400257.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005400258.1 COG1923 Uncharacterized host factor I protein YP_005400259.1 COG2262 GTPases YP_005400260.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005400261.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005400262.1 COG3242 Uncharacterized protein conserved in bacteria YP_005400263.1 COG0104 Adenylosuccinate synthase YP_005400264.1 COG1959 Predicted transcriptional regulator YP_005400265.1 COG0557 Exoribonuclease R YP_005400266.1 COG0566 rRNA methylases YP_005400267.1 COG1960 Acyl-CoA dehydrogenases YP_005400269.1 COG0840 Methyl-accepting chemotaxis protein YP_005400270.1 COG1073 Hydrolases of the alpha/beta superfamily YP_005400271.1 COG0360 Ribosomal protein S6 YP_005400272.1 COG2965 Primosomal replication protein N YP_005400273.1 COG0238 Ribosomal protein S18 YP_005400274.1 COG0359 Ribosomal protein L9 YP_005400275.1 COG3061 Cell envelope opacity-associated protein A YP_005400276.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005400277.1 COG2846 Regulator of cell morphogenesis and NO signaling YP_005400278.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005400279.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_005400280.1 COG3054 Predicted transcriptional regulator YP_005400282.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005400283.1 COG0225 Peptide methionine sulfoxide reductase YP_005400284.1 COG0729 Outer membrane protein YP_005400285.1 COG2911 Uncharacterized protein conserved in bacteria YP_005400286.1 COG2105 Uncharacterized conserved protein YP_005400287.1 COG0221 Inorganic pyrophosphatase YP_005400289.1 COG0840 Methyl-accepting chemotaxis protein YP_005400290.1 COG0158 Fructose-1,6-bisphosphatase YP_005400291.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005400294.1 COG1438 Arginine repressor YP_005400295.1 COG0039 Malate/lactate dehydrogenases YP_005400296.1 COG3423 Predicted transcriptional regulator YP_005400298.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005400299.1 COG0261 Ribosomal protein L21 YP_005400300.1 COG0211 Ribosomal protein L27 YP_005400301.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005400302.1 COG0536 Predicted GTPase YP_005400303.1 COG3385 FOG: Transposase and inactivated derivatives YP_005400304.1 COG0642 Signal transduction histidine kinase YP_005400305.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005400306.1 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) YP_005400307.1 COG0782 Transcription elongation factor YP_005400308.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_005400309.1 COG0293 23S rRNA methylase YP_005400310.1 COG0465 ATP-dependent Zn proteases YP_005400311.1 COG0294 Dihydropteroate synthase and related enzymes YP_005400312.1 COG1109 Phosphomannomutase YP_005400313.1 COG1314 Preprotein translocase subunit SecG YP_005400314.1 COG0779 Uncharacterized protein conserved in bacteria YP_005400315.1 COG0195 Transcription elongation factor YP_005400316.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005400317.1 COG0858 Ribosome-binding factor A YP_005400318.1 COG0130 Pseudouridine synthase YP_005400319.1 COG0184 Ribosomal protein S15P/S13E YP_005400320.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005400321.1 COG4785 Lipoprotein NlpI, contains TPR repeats YP_005400322.1 COG0513 Superfamily II DNA and RNA helicases YP_005400323.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005400324.1 COG0845 Membrane-fusion protein YP_005400325.1 COG0842 ABC-type multidrug transport system, permease component YP_005400326.1 COG0842 ABC-type multidrug transport system, permease component YP_005400327.1 COG0826 Collagenase and related proteases YP_005400328.1 COG0826 Collagenase and related proteases YP_005400329.1 COG3154 Putative lipid carrier protein YP_005400330.1 COG3153 Predicted acetyltransferase YP_005400331.1 COG2827 Predicted endonuclease containing a URI domain YP_005400332.1 COG3787 Uncharacterized protein conserved in bacteria YP_005400333.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_005400334.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005400335.1 COG3709 Uncharacterized component of phosphonate metabolism YP_005400336.1 COG3454 Metal-dependent hydrolase involved in phosphonate metabolism YP_005400337.1 COG4778 ABC-type phosphonate transport system, ATPase component YP_005400338.1 COG4107 ABC-type phosphonate transport system, ATPase component YP_005400339.1 COG3627 Uncharacterized enzyme of phosphonate metabolism YP_005400340.1 COG3626 Uncharacterized enzyme of phosphonate metabolism YP_005400341.1 COG3625 Uncharacterized enzyme of phosphonate metabolism YP_005400342.1 COG3624 Uncharacterized enzyme of phosphonate metabolism YP_005400343.1 COG2188 Transcriptional regulators YP_005400344.1 COG4679 Phage-related protein YP_005400345.1 COG5606 Uncharacterized conserved small protein YP_005400347.1 COG0602 Organic radical activating enzymes YP_005400348.1 COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase YP_005400349.1 COG0366 Glycosidases YP_005400350.1 COG1264 Phosphotransferase system IIB components YP_005400351.1 COG1609 Transcriptional regulators YP_005400352.1 COG0474 Cation transport ATPase YP_005400353.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005400354.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_005400355.1 COG0673 Predicted dehydrogenases and related proteins YP_005400356.1 COG1451 Predicted metal-dependent hydrolase YP_005400357.1 COG2813 16S RNA G1207 methylase RsmC YP_005400358.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005400359.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005400360.1 COG2199 FOG: GGDEF domain YP_005400361.1 COG1472 Beta-glucosidase-related glycosidases YP_005400363.1 COG2909 ATP-dependent transcriptional regulator YP_005400364.1 COG0058 Glucan phosphorylase YP_005400365.1 COG1640 4-alpha-glucanotransferase YP_005400366.1 COG3547 Transposase and inactivated derivatives YP_005400367.1 COG3833 ABC-type maltose transport systems, permease component YP_005400368.1 COG1175 ABC-type sugar transport systems, permease components YP_005400369.1 COG2182 Maltose-binding periplasmic proteins/domains YP_005400370.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005400371.1 COG4580 Maltoporin (phage lambda and maltose receptor) YP_005400373.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005400374.1 COG4954 Uncharacterized protein conserved in bacteria YP_005400375.1 COG0671 Membrane-associated phospholipid phosphatase YP_005400376.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005400377.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005400378.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005400379.1 COG2382 Enterochelin esterase and related enzymes YP_005400380.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005400381.1 COG4779 ABC-type enterobactin transport system, permease component YP_005400382.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005400383.1 COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component YP_005400384.1 COG3663 G:T/U mismatch-specific DNA glycosylase YP_005400387.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005400388.1 COG0358 DNA primase (bacterial type) YP_005400389.1 COG0828 Ribosomal protein S21 YP_005400390.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005400391.1 COG0344 Predicted membrane protein YP_005400392.1 COG1539 Dihydroneopterin aldolase YP_005400393.1 COG1968 Uncharacterized bacitracin resistance protein YP_005400394.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005400395.1 COG3103 SH3 domain protein YP_005400396.1 COG3025 Uncharacterized conserved protein YP_005400397.1 COG1391 Glutamine synthetase adenylyltransferase YP_005400398.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_005400399.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_005400400.1 COG0531 Amino acid transporters YP_005400401.1 COG2960 Uncharacterized protein conserved in bacteria YP_005400402.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005400404.1 COG3384 Uncharacterized conserved protein YP_005400405.1 COG0754 Glutathionylspermidine synthase YP_005400407.1 COG1538 Outer membrane protein YP_005400408.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005400409.1 COG3151 Uncharacterized protein conserved in bacteria YP_005400410.1 COG1409 Predicted phosphohydrolases YP_005400411.1 COG3150 Predicted esterase YP_005400412.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005400413.1 COG1359 Uncharacterized conserved protein YP_005400414.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005400415.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005400416.1 COG2132 Putative multicopper oxidases YP_005400417.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005400418.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005400419.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005400420.1 COG0586 Uncharacterized membrane-associated protein YP_005400421.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005400422.1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component YP_005400423.1 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component YP_005400424.1 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component YP_005400425.1 COG0811 Biopolymer transport proteins YP_005400426.1 COG0848 Biopolymer transport protein YP_005400427.1 COG3385 FOG: Transposase and inactivated derivatives YP_005400428.1 COG2721 Altronate dehydratase YP_005400429.1 COG0477 Permeases of the major facilitator superfamily YP_005400430.1 COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_005400431.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005400432.1 COG1929 Glycerate kinase YP_005400433.1 COG3616 Predicted amino acid aldolase or racemase YP_005400434.1 COG0642 Signal transduction histidine kinase YP_005400435.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_005400436.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005400437.1 COG1694 Predicted pyrophosphatase YP_005400438.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005400439.1 COG0148 Enolase YP_005400440.1 COG3385 FOG: Transposase and inactivated derivatives YP_005400441.1 COG1737 Transcriptional regulators YP_005400442.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005400443.1 COG3010 Putative N-acetylmannosamine-6-phosphate epimerase YP_005400444.1 COG0602 Organic radical activating enzymes YP_005400445.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005400447.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_005400448.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_005400449.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_005400450.1 COG2234 Predicted aminopeptidases YP_005400451.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_005400452.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_005400453.1 COG2895 GTPases - Sulfate adenylate transferase subunit 1 YP_005400454.1 COG0529 Adenylylsulfate kinase and related kinases YP_005400456.1 COG2919 Septum formation initiator YP_005400457.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005400458.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005400459.1 COG0585 Uncharacterized conserved protein YP_005400460.1 COG0496 Predicted acid phosphatase YP_005400461.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_005400462.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005400463.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005400464.1 COG0249 Mismatch repair ATPase (MutS family) YP_005400465.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_005400466.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_005400467.1 COG0468 RecA/RadA recombinase YP_005400468.1 COG2137 Uncharacterized protein conserved in bacteria YP_005400469.1 COG0013 Alanyl-tRNA synthetase YP_005400470.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_005400471.1 COG0637 Predicted phosphatase/phosphohexomutase YP_005400472.1 COG1238 Predicted membrane protein YP_005400473.1 COG2918 Gamma-glutamylcysteine synthetase YP_005400474.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_005400475.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_005400476.1 COG4137 ABC-type uncharacterized transport system, permease component YP_005400477.1 COG0541 Signal recognition particle GTPase YP_005400478.1 COG0228 Ribosomal protein S16 YP_005400479.1 COG0806 RimM protein, required for 16S rRNA processing YP_005400480.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005400481.1 COG0335 Ribosomal protein L19 YP_005400483.1 COG3500 Phage protein D YP_005400484.1 COG3499 Phage protein U YP_005400488.1 COG3498 Phage tail tube protein FII YP_005400489.1 COG3497 Phage tail sheath protein FI YP_005400490.1 COG5301 Phage-related tail fibre protein YP_005400491.1 COG4385 Bacteriophage P2-related tail formation protein YP_005400492.1 COG3948 Phage-related baseplate assembly protein YP_005400493.1 COG3628 Phage baseplate assembly protein W YP_005400494.1 COG4540 Phage P2 baseplate assembly protein gpV YP_005400497.1 COG3772 Phage-related lysozyme (muraminidase) YP_005400499.1 COG5004 P2-like prophage tail protein X YP_005400502.1 COG1734 DnaK suppressor protein YP_005400504.1 COG2932 Predicted transcriptional regulator YP_005400505.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005400506.1 COG1605 Chorismate mutase YP_005400507.1 COG1605 Chorismate mutase YP_005400508.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_005400509.1 COG4105 DNA uptake lipoprotein YP_005400510.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005400511.1 COG1496 Uncharacterized conserved protein YP_005400512.1 COG0477 Permeases of the major facilitator superfamily YP_005400513.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005400514.1 COG1042 Acyl-CoA synthetase (NDP forming) YP_005400515.1 COG3148 Uncharacterized conserved protein YP_005400516.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005400517.1 COG0566 rRNA methylases YP_005400518.1 COG0477 Permeases of the major facilitator superfamily YP_005400519.1 COG1566 Multidrug resistance efflux pump YP_005400520.1 COG1538 Outer membrane protein YP_005400521.1 COG1846 Transcriptional regulators YP_005400523.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_005400524.1 COG0477 Permeases of the major facilitator superfamily YP_005400525.1 COG1598 Uncharacterized conserved protein YP_005400526.1 COG1724 Predicted periplasmic or secreted lipoprotein YP_005400527.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_005400528.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_005400529.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_005400530.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_005400531.1 COG4565 Response regulator of citrate/malate metabolism YP_005400532.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_005400533.1 COG3493 Na+/citrate symporter YP_005400534.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005400535.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005400536.1 COG0208 Ribonucleotide reductase, beta subunit YP_005400537.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005400538.1 COG1780 Protein involved in ribonucleotide reduction YP_005400539.1 COG0695 Glutaredoxin and related proteins YP_005400540.1 COG2128 Uncharacterized conserved protein YP_005400541.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005400542.1 COG0383 Alpha-mannosidase YP_005400543.1 COG4575 Uncharacterized conserved protein YP_005400544.1 COG0477 Permeases of the major facilitator superfamily YP_005400546.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005400548.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) YP_005400549.1 COG1437 Adenylate cyclase, class 2 (thermophilic) YP_005400550.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_005400551.1 COG2938 Uncharacterized conserved protein YP_005400553.1 COG0716 Flavodoxins YP_005400554.1 COG4974 Site-specific recombinase XerD YP_005400555.1 COG1651 Protein-disulfide isomerase YP_005400556.1 COG0608 Single-stranded DNA-specific exonuclease YP_005400557.1 COG1186 Protein chain release factor B YP_005400558.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005400559.1 COG3423 Predicted transcriptional regulator YP_005400560.1 COG0137 Argininosuccinate synthase YP_005400561.1 COG0583 Transcriptional regulator YP_005400562.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005400563.1 COG3314 Uncharacterized protein conserved in bacteria YP_005400564.1 COG0700 Uncharacterized membrane protein YP_005400565.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005400566.1 COG1522 Transcriptional regulators YP_005400568.1 COG2814 Arabinose efflux permease YP_005400569.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005400570.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_005400571.1 COG2071 Predicted glutamine amidotransferases YP_005400572.1 COG0845 Membrane-fusion protein YP_005400573.1 COG0841 Cation/multidrug efflux pump YP_005400574.1 COG0841 Cation/multidrug efflux pump YP_005400575.1 COG1538 Outer membrane protein YP_005400577.1 COG2852 Uncharacterized protein conserved in bacteria YP_005400578.1 COG3423 Predicted transcriptional regulator YP_005400579.1 COG3077 DNA-damage-inducible protein J YP_005400580.1 COG3041 Uncharacterized protein conserved in bacteria YP_005400581.1 COG1538 Outer membrane protein YP_005400582.1 COG0841 Cation/multidrug efflux pump YP_005400583.1 COG0845 Membrane-fusion protein YP_005400584.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005400585.1 COG2188 Transcriptional regulators YP_005400586.1 COG4178 ABC-type uncharacterized transport system, permease and ATPase components YP_005400587.1 COG0457 FOG: TPR repeat YP_005400588.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005400589.1 COG0583 Transcriptional regulator YP_005400590.1 COG2814 Arabinose efflux permease YP_005400591.1 COG0583 Transcriptional regulator YP_005400592.1 COG0019 Diaminopimelate decarboxylase YP_005400593.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_005400594.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005400595.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005400596.1 COG1440 Phosphotransferase system cellobiose-specific component IIB YP_005400597.1 COG2186 Transcriptional regulators YP_005400598.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005400599.1 COG1609 Transcriptional regulators YP_005400600.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005400601.1 COG0477 Permeases of the major facilitator superfamily YP_005400602.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005400604.1 COG3066 DNA mismatch repair protein YP_005400605.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005400606.1 COG3605 Signal transduction protein containing GAF and PtsI domains YP_005400607.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005400608.1 COG0207 Thymidylate synthase YP_005400609.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_005400610.1 COG4795 Type II secretory pathway, component PulJ YP_005400612.1 COG4967 Tfp pilus assembly protein PilV YP_005400613.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_005400614.1 COG0548 Acetylglutamate kinase YP_005400615.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005400616.1 COG2821 Membrane-bound lytic murein transglycosylase YP_005400617.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_005400618.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_005400619.1 COG0520 Selenocysteine lyase YP_005400621.1 COG0583 Transcriptional regulator YP_005400622.1 COG2363 Uncharacterized small membrane protein YP_005400623.1 COG2933 Predicted SAM-dependent methyltransferase YP_005400624.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005400625.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_005400626.1 COG2904 Uncharacterized protein conserved in bacteria YP_005400628.1 COG0477 Permeases of the major facilitator superfamily YP_005400629.1 COG3098 Uncharacterized protein conserved in bacteria YP_005400630.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005400631.1 COG0716 Flavodoxins YP_005400633.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005400634.1 COG2844 UTP:GlnB (protein PII) uridylyltransferase YP_005400635.1 COG0024 Methionine aminopeptidase YP_005400636.1 COG0052 Ribosomal protein S2 YP_005400637.1 COG0264 Translation elongation factor Ts YP_005400638.1 COG0528 Uridylate kinase YP_005400639.1 COG0233 Ribosome recycling factor YP_005400640.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005400641.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005400642.1 COG0575 CDP-diglyceride synthetase YP_005400643.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005400644.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005400645.1 COG2825 Outer membrane protein YP_005400646.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005400647.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005400648.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005400649.1 COG0763 Lipid A disaccharide synthetase YP_005400650.1 COG0164 Ribonuclease HII YP_005400651.1 COG0587 DNA polymerase III, alpha subunit YP_005400652.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_005400653.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_005400654.1 COG0346 Lactoylglutathione lyase and related lyases YP_005400655.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005400656.1 COG2863 Cytochrome c553 YP_005400657.1 COG4568 Transcriptional antiterminator YP_005400659.1 COG4681 Uncharacterized protein conserved in bacteria YP_005400660.1 COG1186 Protein chain release factor B YP_005400661.1 COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance YP_005400662.1 COG0442 Prolyl-tRNA synthetase YP_005400663.1 COG1720 Uncharacterized conserved protein YP_005400665.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005400666.1 COG2011 ABC-type metal ion transport system, permease component YP_005400667.1 COG1135 ABC-type metal ion transport system, ATPase component YP_005400668.1 COG0241 Histidinol phosphatase and related phosphatases YP_005400670.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005400671.1 COG0236 Acyl carrier protein YP_005400672.1 COG0236 Acyl carrier protein YP_005400673.1 COG4648 Predicted membrane protein YP_005400674.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005400675.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005400676.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005400677.1 COG0824 Predicted thioesterase YP_005400679.1 COG4258 Predicted exporter YP_005400681.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005400682.1 COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase YP_005400683.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005400684.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005400685.1 COG2091 Phosphopantetheinyl transferase YP_005400686.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005400687.1 COG0583 Transcriptional regulator YP_005400688.1 COG2814 Arabinose efflux permease YP_005400689.1 COG3021 Uncharacterized protein conserved in bacteria YP_005400690.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005400691.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005400692.1 COG0500 SAM-dependent methyltransferases YP_005400693.1 COG0328 Ribonuclease HI YP_005400694.1 COG0388 Predicted amidohydrolase YP_005400695.1 COG2957 Peptidylarginine deiminase and related enzymes YP_005400696.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005400697.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_005400698.1 COG1802 Transcriptional regulators YP_005400699.1 COG4126 Hydantoin racemase YP_005400700.1 COG0726 Predicted xylanase/chitin deacetylase YP_005400702.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005400704.1 COG0405 Gamma-glutamyltransferase YP_005400705.1 COG1737 Transcriptional regulators YP_005400706.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005400707.1 COG0765 ABC-type amino acid transport system, permease component YP_005400708.1 COG0765 ABC-type amino acid transport system, permease component YP_005400709.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005400710.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_005400711.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005400712.1 COG3195 Uncharacterized protein conserved in bacteria YP_005400713.1 COG2351 Transthyretin-like protein YP_005400714.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005400715.1 COG3812 Uncharacterized protein conserved in bacteria YP_005400716.1 COG0388 Predicted amidohydrolase YP_005400717.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005400718.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005400719.1 COG4229 Predicted enolase-phosphatase YP_005400720.1 COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005400721.1 COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family YP_005400722.1 COG4857 Predicted kinase YP_005400723.1 COG4807 Uncharacterized protein conserved in bacteria YP_005400725.1 COG1960 Acyl-CoA dehydrogenases YP_005400726.1 COG0279 Phosphoheptose isomerase YP_005400727.1 COG0121 Predicted glutamine amidotransferase YP_005400728.1 COG3034 Uncharacterized protein conserved in bacteria YP_005400729.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005400730.1 COG2195 Di- and tripeptidases YP_005400731.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005400732.1 COG1073 Hydrolases of the alpha/beta superfamily YP_005400734.1 COG0263 Glutamate 5-kinase YP_005400735.1 COG0014 Gamma-glutamyl phosphate reductase YP_005400736.1 COG0583 Transcriptional regulator YP_005400737.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005400738.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005400748.1 COG0583 Transcriptional regulator YP_005400749.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005400750.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005400751.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005400754.1 COG3042 Putative hemolysin YP_005400755.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005400756.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005400757.1 COG0840 Methyl-accepting chemotaxis protein YP_005400758.1 COG4952 Predicted sugar isomerase YP_005400759.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005400760.1 COG1129 ABC-type sugar transport system, ATPase component YP_005400761.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005400762.1 COG1737 Transcriptional regulators YP_005400763.1 COG0524 Sugar kinases, ribokinase family YP_005400764.1 COG3526 Uncharacterized protein conserved in bacteria YP_005400765.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005400766.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_005400770.1 COG2814 Arabinose efflux permease YP_005400771.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005400772.1 COG0583 Transcriptional regulator YP_005400773.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005400775.1 COG2199 FOG: GGDEF domain YP_005400776.1 COG0840 Methyl-accepting chemotaxis protein YP_005400779.1 COG1278 Cold shock proteins YP_005400783.1 COG0477 Permeases of the major facilitator superfamily YP_005400784.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005400786.1 COG0477 Permeases of the major facilitator superfamily YP_005400787.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005400788.1 COG3547 Transposase and inactivated derivatives YP_005400790.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005400793.1 COG0642 Signal transduction histidine kinase YP_005400795.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005400796.1 COG0347 Nitrogen regulatory protein PII YP_005400798.1 COG2303 Choline dehydrogenase and related flavoproteins YP_005400799.1 COG2010 Cytochrome c, mono- and diheme variants YP_005400800.1 COG1017 Hemoglobin-like flavoprotein YP_005400801.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005400802.1 COG0477 Permeases of the major facilitator superfamily YP_005400803.1 COG3711 Transcriptional antiterminator YP_005400804.1 COG3683 ABC-type uncharacterized transport system, periplasmic component YP_005400805.1 COG2215 ABC-type uncharacterized transport system, permease component YP_005400806.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005400807.1 COG0565 rRNA methylase YP_005400808.1 COG1959 Predicted transcriptional regulator YP_005400809.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005400810.1 COG0260 Leucyl aminopeptidase YP_005400812.1 COG0105 Nucleoside diphosphate kinase YP_005400813.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005400814.1 COG3063 Tfp pilus assembly protein PilF YP_005400815.1 COG1426 Uncharacterized protein conserved in bacteria YP_005400816.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005400817.1 COG0124 Histidyl-tRNA synthetase YP_005400818.1 COG2976 Uncharacterized protein conserved in bacteria YP_005400819.1 COG1520 FOG: WD40-like repeat YP_005400820.1 COG1160 Predicted GTPases YP_005400821.1 COG0679 Predicted permeases YP_005400824.1 COG3227 Zinc metalloprotease (elastase) YP_005400825.1 COG1609 Transcriptional regulators YP_005400826.1 COG0477 Permeases of the major facilitator superfamily YP_005400827.1 COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases YP_005400828.1 COG1570 Exonuclease VII, large subunit YP_005400829.1 COG0516 IMP dehydrogenase/GMP reductase YP_005400830.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_005400831.1 COG2199 FOG: GGDEF domain YP_005400832.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005400833.1 COG0583 Transcriptional regulator YP_005400835.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005400836.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005400837.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005400839.1 COG1802 Transcriptional regulators YP_005400840.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005400841.1 COG2211 Na+/melibiose symporter and related transporters YP_005400842.1 COG3533 Uncharacterized protein conserved in bacteria YP_005400843.1 COG1605 Chorismate mutase YP_005400844.1 COG0477 Permeases of the major facilitator superfamily YP_005400845.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005400846.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005400847.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005400848.1 COG2055 Malate/L-lactate dehydrogenases YP_005400849.1 COG2211 Na+/melibiose symporter and related transporters YP_005400850.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_005400851.1 COG0826 Collagenase and related proteases YP_005400852.1 COG3422 Uncharacterized conserved protein YP_005400853.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005400854.1 COG0642 Signal transduction histidine kinase YP_005400855.1 COG0477 Permeases of the major facilitator superfamily YP_005400857.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005400858.1 COG0443 Molecular chaperone YP_005400859.1 COG0021 Transketolase YP_005400860.1 COG0176 Transaldolase YP_005400861.1 COG0281 Malic enzyme YP_005400862.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase YP_005400863.1 COG1671 Uncharacterized protein conserved in bacteria YP_005400864.1 COG0408 Coproporphyrinogen III oxidase YP_005400865.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005400866.1 COG0456 Acetyltransferases YP_005400867.1 COG3111 Uncharacterized conserved protein YP_005400870.1 COG2837 Predicted iron-dependent peroxidase YP_005400871.1 COG4150 ABC-type sulfate transport system, periplasmic component YP_005400872.1 COG0555 ABC-type sulfate transport system, permease component YP_005400873.1 COG4208 ABC-type sulfate transport system, permease component YP_005400874.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_005400875.1 COG0031 Cysteine synthase YP_005400876.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005400877.1 COG0642 Signal transduction histidine kinase YP_005400878.1 COG2190 Phosphotransferase system IIA components YP_005400879.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_005400880.1 COG1925 Phosphotransferase system, HPr-related proteins YP_005400881.1 COG0031 Cysteine synthase YP_005400882.1 COG2981 Uncharacterized protein involved in cysteine biosynthesis YP_005400883.1 COG3115 Cell division protein YP_005400884.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005400885.1 COG3530 Uncharacterized protein conserved in bacteria YP_005400886.1 COG0385 Predicted Na+-dependent transporter YP_005400887.1 COG0583 Transcriptional regulator YP_005400889.1 COG3575 Uncharacterized protein conserved in bacteria YP_005400890.1 COG0531 Amino acid transporters YP_005400891.1 COG4303 Ethanolamine ammonia-lyase, large subunit YP_005400892.1 COG4302 Ethanolamine ammonia-lyase, small subunit YP_005400893.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005400894.1 COG2116 Formate/nitrite family of transporters YP_005400895.1 COG3385 FOG: Transposase and inactivated derivatives YP_005400896.1 COG1972 Nucleoside permease YP_005400897.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_005400899.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005400900.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes YP_005400901.1 COG0583 Transcriptional regulator YP_005400902.1 COG4125 Predicted membrane protein YP_005400903.1 COG1794 Aspartate racemase YP_005400904.1 COG1794 Aspartate racemase YP_005400905.1 COG0038 Chloride channel protein EriC YP_005400906.1 COG0837 Glucokinase YP_005400907.1 COG3279 Response regulator of the LytR/AlgR family YP_005400908.1 COG3275 Putative regulator of cell autolysis YP_005400909.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005400910.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005400911.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005400912.1 COG1881 Phospholipid-binding protein YP_005400916.1 COG1462 Uncharacterized protein involved in formation of curli polymers YP_005400919.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005400923.1 COG3376 High-affinity nickel permease YP_005400924.1 COG0068 Hydrogenase maturation factor YP_005400925.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005400926.1 COG1142 Fe-S-cluster-containing hydrogenase components 2 YP_005400927.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_005400929.1 COG3260 Ni,Fe-hydrogenase III small subunit YP_005400930.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005400931.1 COG3262 Ni,Fe-hydrogenase III component G YP_005400932.1 COG0650 Formate hydrogenlyase subunit 4 YP_005400933.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005400934.1 COG1142 Fe-S-cluster-containing hydrogenase components 2 YP_005400936.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_005400937.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005400938.1 COG0298 Hydrogenase maturation factor YP_005400939.1 COG0409 Hydrogenase maturation factor YP_005400940.1 COG0309 Hydrogenase maturation factor YP_005400941.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains YP_005400944.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_005400945.1 COG0583 Transcriptional regulator YP_005400948.1 COG0625 Glutathione S-transferase YP_005400949.1 COG1609 Transcriptional regulators YP_005400951.1 COG0673 Predicted dehydrogenases and related proteins YP_005400952.1 COG0673 Predicted dehydrogenases and related proteins YP_005400953.1 COG0673 Predicted dehydrogenases and related proteins YP_005400954.1 COG2211 Na+/melibiose symporter and related transporters YP_005400955.1 COG1247 Sortase and related acyltransferases YP_005400956.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005400957.1 COG2116 Formate/nitrite family of transporters YP_005400958.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_005400959.1 COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005400960.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005400961.1 COG3114 Heme exporter protein D YP_005400962.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_005400963.1 COG1138 Cytochrome c biogenesis factor YP_005400964.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005400965.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes YP_005400966.1 COG4235 Cytochrome c biogenesis factor YP_005400967.1 COG2853 Surface lipoprotein YP_005400968.1 COG3385 FOG: Transposase and inactivated derivatives YP_005400969.1 COG2067 Long-chain fatty acid transport protein YP_005400970.1 COG3691 Uncharacterized protein conserved in bacteria YP_005400971.1 COG0183 Acetyl-CoA acetyltransferase YP_005400972.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005400973.1 COG2062 Phosphohistidine phosphatase SixA YP_005400974.1 COG2840 Uncharacterized protein conserved in bacteria YP_005400975.1 COG2890 Methylase of polypeptide chain release factors YP_005400976.1 COG0082 Chorismate synthase YP_005400977.1 COG3770 Murein endopeptidase YP_005400978.1 COG0730 Predicted permeases YP_005400979.1 COG3101 Uncharacterized protein conserved in bacteria YP_005400981.1 COG4121 Uncharacterized conserved protein YP_005400982.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005400984.1 COG0471 Di- and tricarboxylate transporters YP_005400985.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005400986.1 COG0607 Rhodanese-related sulfurtransferase YP_005400988.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005400989.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005400990.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005400991.1 COG0101 Pseudouridylate synthase YP_005400992.1 COG0586 Uncharacterized membrane-associated protein YP_005400993.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_005400994.1 COG0285 Folylpolyglutamate synthase YP_005400995.1 COG3147 Uncharacterized protein conserved in bacteria YP_005400996.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005400997.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_005400998.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005400999.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005401000.1 COG4215 ABC-type arginine transport system, permease component YP_005401001.1 COG4160 ABC-type arginine/histidine transport system, permease component YP_005401002.1 COG4598 ABC-type histidine transport system, ATPase component YP_005401003.1 COG2195 Di- and tripeptidases YP_005401004.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005401005.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_005401006.1 COG0625 Glutathione S-transferase YP_005401007.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005401008.1 COG1609 Transcriptional regulators YP_005401009.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005401010.1 COG3414 Phosphotransferase system, galactitol-specific IIB component YP_005401011.1 COG3037 Uncharacterized protein conserved in bacteria YP_005401012.1 COG3959 Transketolase, N-terminal subunit YP_005401013.1 COG3958 Transketolase, C-terminal subunit YP_005401014.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase YP_005401015.1 COG0282 Acetate kinase YP_005401017.1 COG3092 Uncharacterized protein conserved in bacteria YP_005401018.1 COG3013 Uncharacterized conserved protein YP_005401019.1 COG0637 Predicted phosphatase/phosphohexomutase YP_005401020.1 COG0471 Di- and tricarboxylate transporters YP_005401021.1 COG1896 Predicted hydrolases of HD superfamily YP_005401022.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005401023.1 COG0583 Transcriptional regulator YP_005401024.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005401025.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005401026.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005401027.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_005401028.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_005401029.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005401030.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005401031.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005401032.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005401033.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005401034.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005401035.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005401036.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005401038.1 COG4575 Uncharacterized conserved protein YP_005401039.1 COG1169 Isochorismate synthase YP_005401040.1 COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YP_005401041.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005401042.1 COG0447 Dihydroxynaphthoic acid synthase YP_005401043.1 COG1441 O-succinylbenzoate synthase YP_005401044.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005401045.1 COG0753 Catalase YP_005401047.1 COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA YP_005401048.1 COG0633 Ferredoxin YP_005401049.1 COG0208 Ribonucleotide reductase, beta subunit YP_005401050.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005401051.1 COG3468 Type V secretory pathway, adhesin AidA YP_005401052.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_005401053.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_005401054.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005401055.1 COG0642 Signal transduction histidine kinase YP_005401056.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005401057.1 COG0642 Signal transduction histidine kinase YP_005401059.1 COG1538 Outer membrane protein YP_005401060.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_005401061.1 COG0845 Membrane-fusion protein YP_005401062.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005401063.1 COG3203 Outer membrane protein (porin) YP_005401064.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005401066.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005401068.1 COG0435 Predicted glutathione S-transferase YP_005401069.1 COG3083 Predicted hydrolase of alkaline phosphatase superfamily YP_005401070.1 COG3082 Uncharacterized protein conserved in bacteria YP_005401071.1 COG3081 Nucleoid-associated protein YP_005401072.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005401073.1 COG1061 DNA or RNA helicases of superfamily II YP_005401074.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005401075.1 COG0477 Permeases of the major facilitator superfamily YP_005401076.1 COG0477 Permeases of the major facilitator superfamily YP_005401077.1 COG1609 Transcriptional regulators YP_005401078.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401079.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401080.1 COG2010 Cytochrome c, mono- and diheme variants YP_005401081.1 COG2303 Choline dehydrogenase and related flavoproteins YP_005401084.1 COG4172 ABC-type uncharacterized transport system, duplicated ATPase component YP_005401085.1 COG4239 ABC-type uncharacterized transport system, permease component YP_005401086.1 COG4174 ABC-type uncharacterized transport system, permease component YP_005401087.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005401088.1 COG2200 FOG: EAL domain YP_005401089.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005401090.1 COG0671 Membrane-associated phospholipid phosphatase YP_005401091.1 COG0523 Putative GTPases (G3E family) YP_005401093.1 COG2186 Transcriptional regulators YP_005401094.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_005401095.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005401096.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005401097.1 COG0477 Permeases of the major facilitator superfamily YP_005401098.1 COG0477 Permeases of the major facilitator superfamily YP_005401099.1 COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain YP_005401100.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) YP_005401101.1 COG0648 Endonuclease IV YP_005401102.1 COG2855 Predicted membrane protein YP_005401103.1 COG0583 Transcriptional regulator YP_005401104.1 COG0833 Amino acid transporters YP_005401105.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005401106.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005401107.1 COG2503 Predicted secreted acid phosphatase YP_005401108.1 COG3203 Outer membrane protein (porin) YP_005401109.1 COG1199 Rad3-related DNA helicases YP_005401110.1 COG0547 Anthranilate phosphoribosyltransferase YP_005401111.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_005401112.1 COG1164 Oligoendopeptidase F YP_005401113.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_005401114.1 COG3129 Predicted SAM-dependent methyltransferase YP_005401115.1 COG2202 FOG: PAS/PAC domain YP_005401117.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005401118.1 COG0765 ABC-type amino acid transport system, permease component YP_005401119.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005401120.1 COG1734 DnaK suppressor protein YP_005401121.1 COG3524 Capsule polysaccharide export protein YP_005401123.1 COG1596 Periplasmic protein involved in polysaccharide export YP_005401124.1 COG3563 Capsule polysaccharide export protein YP_005401125.1 COG3562 Capsule polysaccharide export protein YP_005401129.1 COG0438 Glycosyltransferase YP_005401131.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005401132.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_005401133.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005401134.1 COG5343 Uncharacterized protein conserved in bacteria YP_005401135.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005401136.1 COG2335 Secreted and surface protein containing fasciclin-like repeats YP_005401137.1 COG5006 Predicted permease, DMT superfamily YP_005401139.1 COG2041 Sulfite oxidase and related enzymes YP_005401140.1 COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) YP_005401142.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005401143.1 COG0642 Signal transduction histidine kinase YP_005401144.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005401145.1 COG3021 Uncharacterized protein conserved in bacteria YP_005401146.1 COG0583 Transcriptional regulator YP_005401147.1 COG0066 3-isopropylmalate dehydratase small subunit YP_005401148.1 COG0065 3-isopropylmalate dehydratase large subunit YP_005401149.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005401150.1 COG1292 Choline-glycine betaine transporter YP_005401151.1 COG1309 Transcriptional regulator YP_005401152.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005401153.1 COG2303 Choline dehydrogenase and related flavoproteins YP_005401154.1 COG2153 Predicted acyltransferase YP_005401155.1 COG0583 Transcriptional regulator YP_005401156.1 COG3238 Uncharacterized protein conserved in bacteria YP_005401157.1 COG3238 Uncharacterized protein conserved in bacteria YP_005401158.1 COG5654 Uncharacterized conserved protein YP_005401159.1 COG5642 Uncharacterized conserved protein YP_005401160.1 COG3248 Nucleoside-binding outer membrane protein YP_005401161.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005401162.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005401163.1 COG0303 Molybdopterin biosynthesis enzyme YP_005401164.1 COG1349 Transcriptional regulators of sugar metabolism YP_005401165.1 COG3468 Type V secretory pathway, adhesin AidA YP_005401166.1 COG0477 Permeases of the major facilitator superfamily YP_005401167.1 COG1446 Asparaginase YP_005401168.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005401169.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005401170.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005401171.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005401172.1 COG0627 Predicted esterase YP_005401173.1 COG1062 Zn-dependent alcohol dehydrogenases, class III YP_005401174.1 COG0583 Transcriptional regulator YP_005401175.1 COG0477 Permeases of the major facilitator superfamily YP_005401176.1 COG0302 GTP cyclohydrolase I YP_005401177.1 COG2311 Predicted membrane protein YP_005401178.1 COG1609 Transcriptional regulators YP_005401179.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005401180.1 COG1129 ABC-type sugar transport system, ATPase component YP_005401181.1 COG4211 ABC-type glucose/galactose transport system, permease component YP_005401182.1 COG2949 Uncharacterized membrane protein YP_005401183.1 COG0281 Malic enzyme YP_005401184.1 COG0295 Cytidine deaminase YP_005401185.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005401186.1 COG4160 ABC-type arginine/histidine transport system, permease component YP_005401187.1 COG4215 ABC-type arginine transport system, permease component YP_005401188.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005401189.1 COG4161 ABC-type arginine transport system, ATPase component YP_005401191.1 COG0393 Uncharacterized conserved protein YP_005401192.1 COG3023 Negative regulator of beta-lactamase expression YP_005401193.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005401194.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_005401195.1 COG2008 Threonine aldolase YP_005401196.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_005401197.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_005401198.1 COG1151 6Fe-6S prismane cluster-containing protein YP_005401199.1 COG2431 Predicted membrane protein YP_005401200.1 COG3593 Predicted ATP-dependent endonuclease of the OLD family YP_005401201.1 COG2990 Uncharacterized protein conserved in bacteria YP_005401202.1 COG1278 Cold shock proteins YP_005401203.1 COG2127 Uncharacterized conserved protein YP_005401204.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005401205.1 COG0361 Translation initiation factor 1 (IF-1) YP_005401206.1 COG2360 Leu/Phe-tRNA-protein transferase YP_005401207.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_005401208.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_005401209.1 COG0492 Thioredoxin reductase YP_005401210.1 COG1522 Transcriptional regulators YP_005401211.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005401212.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005401213.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_005401214.1 COG0172 Seryl-tRNA synthetase YP_005401215.1 COG3547 Transposase and inactivated derivatives YP_005401216.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005401217.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005401218.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_005401219.1 COG3302 DMSO reductase anchor subunit YP_005401220.1 COG3381 Uncharacterized component of anaerobic dehydrogenases YP_005401221.1 COG1145 Ferredoxin YP_005401222.1 COG0477 Permeases of the major facilitator superfamily YP_005401223.1 COG1180 Pyruvate-formate lyase-activating enzyme YP_005401224.1 COG0582 Integrase YP_005401225.1 COG1396 Predicted transcriptional regulators YP_005401229.1 COG1734 DnaK suppressor protein YP_005401234.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005401235.1 COG5518 Bacteriophage capsid portal protein YP_005401241.1 COG5004 P2-like prophage tail protein X YP_005401243.1 COG3772 Phage-related lysozyme (muraminidase) YP_005401248.1 COG1224 DNA helicase TIP49, TBP-interacting protein YP_005401249.1 COG4540 Phage P2 baseplate assembly protein gpV YP_005401250.1 COG3628 Phage baseplate assembly protein W YP_005401251.1 COG3948 Phage-related baseplate assembly protein YP_005401252.1 COG4385 Bacteriophage P2-related tail formation protein YP_005401253.1 COG5301 Phage-related tail fibre protein YP_005401254.1 COG0557 Exoribonuclease R YP_005401255.1 COG3497 Phage tail sheath protein FI YP_005401256.1 COG3498 Phage tail tube protein FII YP_005401259.1 COG5283 Phage-related tail protein YP_005401260.1 COG3499 Phage protein U YP_005401261.1 COG3500 Phage protein D YP_005401263.1 COG1882 Pyruvate-formate lyase YP_005401264.1 COG2116 Formate/nitrite family of transporters YP_005401265.1 COG1944 Uncharacterized conserved protein YP_005401266.1 COG1932 Phosphoserine aminotransferase YP_005401267.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005401268.1 COG0283 Cytidylate kinase YP_005401269.1 COG0539 Ribosomal protein S1 YP_005401270.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005401271.1 COG0658 Predicted membrane metal-binding protein YP_005401272.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005401273.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005401274.1 COG1278 Cold shock proteins YP_005401275.1 COG1278 Cold shock proteins YP_005401276.1 COG3214 Uncharacterized protein conserved in bacteria YP_005401277.1 COG2835 Uncharacterized conserved protein YP_005401278.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005401280.1 COG1434 Uncharacterized conserved protein YP_005401281.1 COG0500 SAM-dependent methyltransferases YP_005401282.1 COG3006 Uncharacterized protein involved in chromosome partitioning YP_005401283.1 COG3095 Uncharacterized protein involved in chromosome partitioning YP_005401284.1 COG3096 Uncharacterized protein involved in chromosome partitioning YP_005401285.1 COG2989 Uncharacterized protein conserved in bacteria YP_005401286.1 COG3108 Uncharacterized protein conserved in bacteria YP_005401287.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005401288.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_005401289.1 COG3203 Outer membrane protein (porin) YP_005401290.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_005401291.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_005401292.1 COG0308 Aminopeptidase N YP_005401293.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005401294.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_005401295.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005401296.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005401297.1 COG0431 Predicted flavoprotein YP_005401298.1 COG0167 Dihydroorotate dehydrogenase YP_005401300.1 COG3217 Uncharacterized Fe-S protein YP_005401301.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_005401302.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005401303.1 COG2995 Uncharacterized paraquat-inducible protein A YP_005401304.1 COG3008 Paraquat-inducible protein B YP_005401305.1 COG3009 Uncharacterized protein conserved in bacteria YP_005401306.1 COG3130 Ribosome modulation factor YP_005401307.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005401308.1 COG1067 Predicted ATP-dependent protease YP_005401309.1 COG3120 Uncharacterized protein conserved in bacteria YP_005401310.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005401312.1 COG3070 Regulator of competence-specific genes YP_005401313.1 COG1289 Predicted membrane protein YP_005401314.1 COG3304 Predicted membrane protein YP_005401315.1 COG0210 Superfamily I DNA and RNA helicases YP_005401316.1 COG1803 Methylglyoxal synthase YP_005401317.1 COG3110 Uncharacterized protein conserved in bacteria YP_005401318.1 COG1832 Predicted CoA-binding protein YP_005401319.1 COG3785 Uncharacterized conserved protein YP_005401320.1 COG1092 Predicted SAM-dependent methyltransferases YP_005401321.1 COG1254 Acylphosphatases YP_005401322.1 COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit YP_005401323.1 COG0670 Integral membrane protein, interacts with FtsH YP_005401324.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005401325.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005401326.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_005401327.1 COG1178 ABC-type Fe3+ transport system, permease component YP_005401328.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_005401329.1 COG0840 Methyl-accepting chemotaxis protein YP_005401330.1 COG4297 Uncharacterized protein containing double-stranded beta helix domain YP_005401332.1 COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain YP_005401334.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005401335.1 COG1396 Predicted transcriptional regulators YP_005401336.1 COG2071 Predicted glutamine amidotransferases YP_005401337.1 COG0174 Glutamine synthetase YP_005401338.1 COG0531 Amino acid transporters YP_005401339.1 COG2925 Exonuclease I YP_005401340.1 COG2926 Uncharacterized protein conserved in bacteria YP_005401341.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005401342.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005401343.1 COG2182 Maltose-binding periplasmic proteins/domains YP_005401344.1 COG1175 ABC-type sugar transport systems, permease components YP_005401345.1 COG3833 ABC-type maltose transport systems, permease component YP_005401346.1 COG3867 Arabinogalactan endo-1,4-beta-galactosidase YP_005401347.1 COG1874 Beta-galactosidase YP_005401348.1 COG1264 Phosphotransferase system IIB components YP_005401349.1 COG4580 Maltoporin (phage lambda and maltose receptor) YP_005401350.1 COG1609 Transcriptional regulators YP_005401351.1 COG3152 Predicted membrane protein YP_005401352.1 COG3545 Predicted esterase of the alpha/beta hydrolase fold YP_005401353.1 COG1767 Triphosphoribosyl-dephospho-CoA synthetase YP_005401354.1 COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) YP_005401355.1 COG3051 Citrate lyase, alpha subunit YP_005401356.1 COG2301 Citrate lyase beta subunit YP_005401357.1 COG3052 Citrate lyase, gamma subunit YP_005401358.1 COG3053 Citrate lyase synthetase YP_005401359.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_005401360.1 COG3493 Na+/citrate symporter YP_005401361.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_005401362.1 COG4565 Response regulator of citrate/malate metabolism YP_005401363.1 COG0534 Na+-driven multidrug efflux pump YP_005401364.1 COG0775 Nucleoside phosphorylase YP_005401365.1 COG0625 Glutathione S-transferase YP_005401366.1 COG0477 Permeases of the major facilitator superfamily YP_005401367.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005401368.1 COG0583 Transcriptional regulator YP_005401369.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401370.1 COG1609 Transcriptional regulators YP_005401371.1 COG0477 Permeases of the major facilitator superfamily YP_005401372.1 COG1621 Beta-fructosidases (levanase/invertase) YP_005401375.1 COG3713 Outer membrane protein V YP_005401377.1 COG0845 Membrane-fusion protein YP_005401378.1 COG0841 Cation/multidrug efflux pump YP_005401379.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005401380.1 COG0443 Molecular chaperone YP_005401381.1 COG0477 Permeases of the major facilitator superfamily YP_005401382.1 COG0583 Transcriptional regulator YP_005401383.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005401384.1 COG0583 Transcriptional regulator YP_005401385.1 COG2814 Arabinose efflux permease YP_005401386.1 COG1073 Hydrolases of the alpha/beta superfamily YP_005401387.1 COG4925 Uncharacterized conserved protein YP_005401388.1 COG2124 Cytochrome P450 YP_005401389.1 COG0583 Transcriptional regulator YP_005401390.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005401392.1 COG1538 Outer membrane protein YP_005401393.1 COG1846 Transcriptional regulators YP_005401394.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_005401395.1 COG0583 Transcriptional regulator YP_005401396.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005401397.1 COG2350 Uncharacterized protein conserved in bacteria YP_005401398.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005401399.1 COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase YP_005401400.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005401401.1 COG1605 Chorismate mutase YP_005401402.1 COG0125 Thymidylate kinase YP_005401403.1 COG0386 Glutathione peroxidase YP_005401404.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_005401405.1 COG1178 ABC-type Fe3+ transport system, permease component YP_005401406.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_005401407.1 COG2199 FOG: GGDEF domain YP_005401408.1 COG1396 Predicted transcriptional regulators YP_005401409.1 COG3382 Uncharacterized conserved protein YP_005401410.1 COG2186 Transcriptional regulators YP_005401411.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005401412.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005401413.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005401414.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005401415.1 COG3342 Uncharacterized conserved protein YP_005401417.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005401418.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005401419.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005401420.1 COG0006 Xaa-Pro aminopeptidase YP_005401421.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005401422.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005401423.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005401424.1 COG0765 ABC-type amino acid transport system, permease component YP_005401425.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005401426.1 COG1802 Transcriptional regulators YP_005401427.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401428.1 COG0583 Transcriptional regulator YP_005401430.1 COG2879 Uncharacterized small protein YP_005401431.1 COG1966 Carbon starvation protein, predicted membrane protein YP_005401432.1 COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein YP_005401433.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005401434.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005401435.1 COG1069 Ribulose kinase YP_005401436.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005401437.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005401438.1 COG1129 ABC-type sugar transport system, ATPase component YP_005401439.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005401441.1 COG4992 Ornithine/acetylornithine aminotransferase YP_005401442.1 COG3138 Arginine/ornithine N-succinyltransferase beta subunit YP_005401443.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005401444.1 COG3724 Succinylarginine dihydrolase YP_005401445.1 COG2988 Succinylglutamate desuccinylase YP_005401446.1 COG3104 Dipeptide/tripeptide permease YP_005401447.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005401448.1 COG1387 Histidinol phosphatase and related hydrolases of the PHP family YP_005401449.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005401450.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005401451.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005401456.1 COG1859 RNA:NAD 2'-phosphotransferase YP_005401457.1 COG1387 Histidinol phosphatase and related hydrolases of the PHP family YP_005401458.1 COG3381 Uncharacterized component of anaerobic dehydrogenases YP_005401459.1 COG0207 Thymidylate synthase YP_005401460.1 COG2999 Glutaredoxin 2 YP_005401461.1 COG0477 Permeases of the major facilitator superfamily YP_005401462.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005401463.1 COG3132 Uncharacterized protein conserved in bacteria YP_005401464.1 COG0673 Predicted dehydrogenases and related proteins YP_005401465.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005401466.1 COG0018 Arginyl-tRNA synthetase YP_005401467.1 COG3102 Uncharacterized protein conserved in bacteria YP_005401468.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_005401469.1 COG3142 Uncharacterized protein involved in copper resistance YP_005401473.1 COG0500 SAM-dependent methyltransferases YP_005401474.1 COG0500 SAM-dependent methyltransferases YP_005401475.1 COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily YP_005401476.1 COG1801 Uncharacterized conserved protein YP_005401477.1 COG1335 Amidases related to nicotinamidase YP_005401478.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005401479.1 COG0217 Uncharacterized conserved protein YP_005401480.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005401481.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005401482.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005401483.1 COG1472 Beta-glucosidase-related glycosidases YP_005401484.1 COG2211 Na+/melibiose symporter and related transporters YP_005401485.1 COG0583 Transcriptional regulator YP_005401486.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401487.1 COG1264 Phosphotransferase system IIB components YP_005401488.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005401489.1 COG3711 Transcriptional antiterminator YP_005401490.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005401493.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_005401494.1 COG0300 Short-chain dehydrogenases of various substrate specificities YP_005401495.1 COG1733 Predicted transcriptional regulators YP_005401496.1 COG2936 Predicted acyl esterases YP_005401497.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005401498.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005401499.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005401500.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005401502.1 COG0583 Transcriptional regulator YP_005401503.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005401504.1 COG5457 Uncharacterized conserved small protein YP_005401505.1 COG0143 Methionyl-tRNA synthetase YP_005401506.1 COG0489 ATPases involved in chromosome partitioning YP_005401507.1 COG0572 Uridine kinase YP_005401508.1 COG0717 Deoxycytidine deaminase YP_005401509.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_005401510.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005401511.1 COG1210 UDP-glucose pyrophosphorylase YP_005401513.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005401515.1 COG1209 dTDP-glucose pyrophosphorylase YP_005401516.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_005401518.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_005401519.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_005401520.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_005401521.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005401522.1 COG0500 SAM-dependent methyltransferases YP_005401523.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005401524.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005401525.1 COG1216 Predicted glycosyltransferases YP_005401526.1 COG0362 6-phosphogluconate dehydrogenase YP_005401527.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_005401528.1 COG0107 Imidazoleglycerol-phosphate synthase YP_005401529.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_005401530.1 COG0118 Glutamine amidotransferase YP_005401531.1 COG0241 Histidinol phosphatase and related phosphatases YP_005401532.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_005401533.1 COG0141 Histidinol dehydrogenase YP_005401534.1 COG0040 ATP phosphoribosyltransferase YP_005401535.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005401539.1 COG1291 Flagellar motor component YP_005401540.1 COG1360 Flagellar motor protein YP_005401541.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_005401542.1 COG0835 Chemotaxis signal transduction protein YP_005401543.1 COG0582 Integrase YP_005401546.1 COG3311 Predicted transcriptional regulator YP_005401547.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_005401554.1 COG4570 Holliday junction resolvase YP_005401555.1 COG3646 Uncharacterized phage-encoded protein YP_005401558.1 COG1409 Predicted phosphohydrolases YP_005401562.1 COG3179 Predicted chitinase YP_005401565.1 COG5525 Bacteriophage tail assembly protein YP_005401567.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005401572.1 COG5492 Bacterial surface proteins containing Ig-like domains YP_005401575.1 COG5281 Phage-related minor tail protein YP_005401576.1 COG4718 Phage-related protein YP_005401577.1 COG4672 Phage-related protein YP_005401578.1 COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily YP_005401579.1 COG4723 Phage-related protein, tail component YP_005401580.1 COG4733 Phage-related protein, tail component YP_005401586.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_005401587.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005401588.1 COG2135 Uncharacterized conserved protein YP_005401592.1 COG1396 Predicted transcriptional regulators YP_005401593.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_005401594.1 COG0477 Permeases of the major facilitator superfamily YP_005401597.1 COG0840 Methyl-accepting chemotaxis protein YP_005401598.1 COG0840 Methyl-accepting chemotaxis protein YP_005401599.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_005401600.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_005401601.1 COG0784 FOG: CheY-like receiver YP_005401602.1 COG3143 Chemotaxis protein YP_005401603.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_005401604.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_005401607.1 COG4104 Uncharacterized conserved protein YP_005401610.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_005401611.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_005401612.1 COG1815 Flagellar basal body protein YP_005401613.1 COG1558 Flagellar basal body rod protein YP_005401614.1 COG1843 Flagellar hook capping protein YP_005401615.1 COG1749 Flagellar hook protein FlgE YP_005401616.1 COG4787 Flagellar basal body rod protein YP_005401617.1 COG4786 Flagellar basal body rod protein YP_005401618.1 COG2063 Flagellar basal body L-ring protein YP_005401619.1 COG1706 Flagellar basal-body P-ring protein YP_005401620.1 COG3951 Rod binding protein YP_005401621.1 COG1256 Flagellar hook-associated protein YP_005401622.1 COG1344 Flagellin and related hook-associated proteins YP_005401623.1 COG1346 Putative effector of murein hydrolase YP_005401624.1 COG1380 Putative effector of murein hydrolase LrgA YP_005401625.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005401626.1 COG0765 ABC-type amino acid transport system, permease component YP_005401627.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005401628.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005401629.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005401630.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005401631.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005401632.1 COG1309 Transcriptional regulator YP_005401633.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_005401634.1 COG0835 Chemotaxis signal transduction protein YP_005401635.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005401636.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005401638.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005401639.1 COG1835 Predicted acyltransferases YP_005401640.1 COG0583 Transcriptional regulator YP_005401641.1 COG2801 Transposase and inactivated derivatives YP_005401642.1 COG2801 Transposase and inactivated derivatives YP_005401645.1 COG0477 Permeases of the major facilitator superfamily YP_005401646.1 COG1566 Multidrug resistance efflux pump YP_005401648.1 COG1289 Predicted membrane protein YP_005401649.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005401650.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005401651.1 COG0376 Catalase (peroxidase I) YP_005401652.1 COG0277 FAD/FMN-containing dehydrogenases YP_005401653.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_005401654.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005401655.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005401656.1 COG1402 Uncharacterized protein, putative amidase YP_005401657.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005401658.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005401659.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_005401660.1 COG0583 Transcriptional regulator YP_005401661.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005401662.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005401663.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_005401665.1 COG3122 Uncharacterized protein conserved in bacteria YP_005401666.1 COG0524 Sugar kinases, ribokinase family YP_005401667.1 COG2222 Predicted phosphosugar isomerases YP_005401668.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005401669.1 COG2188 Transcriptional regulators YP_005401670.1 COG1309 Transcriptional regulator YP_005401671.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005401672.1 COG0300 Short-chain dehydrogenases of various substrate specificities YP_005401673.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401674.1 COG0345 Pyrroline-5-carboxylate reductase YP_005401675.1 COG1538 Outer membrane protein YP_005401676.1 COG1309 Transcriptional regulator YP_005401677.1 COG0845 Membrane-fusion protein YP_005401678.1 COG0841 Cation/multidrug efflux pump YP_005401679.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401682.1 COG0210 Superfamily I DNA and RNA helicases YP_005401684.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005401687.1 COG1201 Lhr-like helicases YP_005401690.1 COG4227 Antirestriction protein YP_005401691.1 COG2801 Transposase and inactivated derivatives YP_005401692.1 COG2801 Transposase and inactivated derivatives YP_005401693.1 COG4227 Antirestriction protein YP_005401695.1 COG1357 Uncharacterized low-complexity proteins YP_005401696.1 COG0582 Integrase YP_005401697.1 COG3547 Transposase and inactivated derivatives YP_005401698.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005401699.1 COG0232 dGTP triphosphohydrolase YP_005401703.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005401704.1 COG2948 Type IV secretory pathway, VirB10 components YP_005401705.1 COG3504 Type IV secretory pathway, VirB9 components YP_005401706.1 COG3736 Type IV secretory pathway, component VirB8 YP_005401708.1 COG3704 Type IV secretory pathway, VirB6 components YP_005401710.1 COG3451 Type IV secretory pathway, VirB4 components YP_005401712.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005401714.1 COG1734 DnaK suppressor protein YP_005401716.1 COG3311 Predicted transcriptional regulator YP_005401718.1 COG2814 Arabinose efflux permease YP_005401719.1 COG0693 Putative intracellular protease/amidase YP_005401720.1 COG0583 Transcriptional regulator YP_005401721.1 COG0583 Transcriptional regulator YP_005401722.1 COG0726 Predicted xylanase/chitin deacetylase YP_005401724.1 COG0693 Putative intracellular protease/amidase YP_005401725.1 COG0662 Mannose-6-phosphate isomerase YP_005401727.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005401729.1 COG3239 Fatty acid desaturase YP_005401730.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005401731.1 COG4992 Ornithine/acetylornithine aminotransferase YP_005401732.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_005401733.1 COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_005401734.1 COG0236 Acyl carrier protein YP_005401735.1 COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_005401736.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005401737.1 COG2977 Phosphopantetheinyl transferase component of siderophore synthetase YP_005401738.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401739.1 COG0582 Integrase YP_005401740.1 COG3228 Uncharacterized protein conserved in bacteria YP_005401741.1 COG2200 FOG: EAL domain YP_005401746.1 COG3209 Rhs family protein YP_005401747.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_005401748.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005401749.1 COG3479 Phenolic acid decarboxylase YP_005401750.1 COG0583 Transcriptional regulator YP_005401751.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005401752.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005401754.1 COG3817 Predicted membrane protein YP_005401755.1 COG3819 Predicted membrane protein YP_005401756.1 COG1636 Uncharacterized protein conserved in bacteria YP_005401757.1 COG0628 Predicted permease YP_005401758.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005401760.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_005401761.1 COG1278 Cold shock proteins YP_005401764.1 COG0840 Methyl-accepting chemotaxis protein YP_005401765.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005401767.1 COG0477 Permeases of the major facilitator superfamily YP_005401768.1 COG4289 Uncharacterized protein conserved in bacteria YP_005401769.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005401770.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase YP_005401771.1 COG3131 Periplasmic glucans biosynthesis protein YP_005401773.1 COG0371 Glycerol dehydrogenase and related enzymes YP_005401774.1 COG2733 Predicted membrane protein YP_005401775.1 COG0583 Transcriptional regulator YP_005401776.1 COG0477 Permeases of the major facilitator superfamily YP_005401777.1 COG4615 ABC-type siderophore export system, fused ATPase and permease components YP_005401779.1 COG3264 Small-conductance mechanosensitive channel YP_005401780.1 COG3696 Putative silver efflux pump YP_005401781.1 COG0845 Membrane-fusion protein YP_005401782.1 COG1538 Outer membrane protein YP_005401783.1 COG5569 Uncharacterized conserved protein YP_005401785.1 COG0598 Mg2+ and Co2+ transporters YP_005401786.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401787.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005401788.1 COG1538 Outer membrane protein YP_005401789.1 COG0477 Permeases of the major facilitator superfamily YP_005401790.1 COG1566 Multidrug resistance efflux pump YP_005401791.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005401792.1 COG1785 Alkaline phosphatase YP_005401793.1 COG1376 Uncharacterized protein conserved in bacteria YP_005401794.1 COG0477 Permeases of the major facilitator superfamily YP_005401795.1 COG1566 Multidrug resistance efflux pump YP_005401796.1 COG1309 Transcriptional regulator YP_005401797.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005401798.1 COG4122 Predicted O-methyltransferase YP_005401799.1 COG1472 Beta-glucosidase-related glycosidases YP_005401800.1 COG2059 Chromate transport protein ChrA YP_005401801.1 COG2059 Chromate transport protein ChrA YP_005401802.1 COG0583 Transcriptional regulator YP_005401803.1 COG0640 Predicted transcriptional regulators YP_005401804.1 COG0480 Translation elongation factors (GTPases) YP_005401806.1 COG0655 Multimeric flavodoxin WrbA YP_005401807.1 COG0582 Integrase YP_005401811.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005401815.1 COG5295 Autotransporter adhesin YP_005401819.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_005401820.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005401821.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005401822.1 COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin YP_005401823.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005401824.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005401825.1 COG0477 Permeases of the major facilitator superfamily YP_005401826.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005401827.1 COG3486 Lysine/ornithine N-monooxygenase YP_005401828.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_005401829.1 COG0469 Pyruvate kinase YP_005401830.1 COG1737 Transcriptional regulators YP_005401831.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005401832.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_005401833.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005401834.1 COG1199 Rad3-related DNA helicases YP_005401835.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005401836.1 COG3065 Starvation-inducible outer membrane lipoprotein YP_005401837.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005401838.1 COG0349 Ribonuclease D YP_005401839.1 COG0851 Septum formation topological specificity factor YP_005401840.1 COG2894 Septum formation inhibitor-activating ATPase YP_005401841.1 COG0850 Septum formation inhibitor YP_005401842.1 COG3100 Uncharacterized protein conserved in bacteria YP_005401843.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_005401844.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_005401845.1 COG2983 Uncharacterized conserved protein YP_005401847.1 COG0628 Predicted permease YP_005401849.1 COG1495 Disulfide bond formation protein DsbB YP_005401850.1 COG3067 Na+/H+ antiporter YP_005401851.1 COG2186 Transcriptional regulators YP_005401852.1 COG2719 Uncharacterized conserved protein YP_005401853.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005401855.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005401856.1 COG0787 Alanine racemase YP_005401857.1 COG0477 Permeases of the major facilitator superfamily YP_005401859.1 COG0171 NAD synthase YP_005401860.1 COG3137 Putative salt-induced outer membrane protein YP_005401861.1 COG3547 Transposase and inactivated derivatives YP_005401862.1 COG2831 Hemolysin activation/secretion protein YP_005401863.1 COG3210 Large exoproteins involved in heme utilization or adhesion YP_005401865.1 COG1859 RNA:NAD 2'-phosphotransferase YP_005401866.1 COG3210 Large exoproteins involved in heme utilization or adhesion YP_005401871.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005401872.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005401874.1 COG2718 Uncharacterized conserved protein YP_005401875.1 COG2766 Putative Ser protein kinase YP_005401876.1 COG3713 Outer membrane protein V YP_005401877.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005401878.1 COG0676 Uncharacterized enzymes related to aldose 1-epimerase YP_005401879.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005401880.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_005401881.1 COG3139 Uncharacterized protein conserved in bacteria YP_005401882.1 COG1335 Amidases related to nicotinamidase YP_005401883.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_005401884.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005401885.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005401886.1 COG0778 Nitroreductase YP_005401887.1 COG0550 Topoisomerase IA YP_005401889.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005401890.1 COG0708 Exonuclease III YP_005401891.1 COG3283 Transcriptional regulator of aromatic amino acids metabolism YP_005401892.1 COG2077 Peroxiredoxin YP_005401893.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005401894.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005401895.1 COG0477 Permeases of the major facilitator superfamily YP_005401896.1 COG0583 Transcriptional regulator YP_005401897.1 COG0598 Mg2+ and Co2+ transporters YP_005401899.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005401902.1 COG0591 Na+/proline symporter YP_005401905.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401906.1 COG2186 Transcriptional regulators YP_005401907.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005401908.1 COG0477 Permeases of the major facilitator superfamily YP_005401910.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005401911.1 COG3042 Putative hemolysin YP_005401912.1 COG3187 Heat shock protein YP_005401913.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005401914.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005401915.1 COG1175 ABC-type sugar transport systems, permease components YP_005401916.1 COG0395 ABC-type sugar transport system, permease component YP_005401917.1 COG1409 Predicted phosphohydrolases YP_005401918.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005401921.1 COG3784 Uncharacterized protein conserved in bacteria YP_005401922.1 COG1182 Acyl carrier protein phosphodiesterase YP_005401923.1 COG1643 HrpA-like helicases YP_005401924.1 COG3591 V8-like Glu-specific endopeptidase YP_005401926.1 COG2317 Zn-dependent carboxypeptidase YP_005401927.1 COG0642 Signal transduction histidine kinase YP_005401928.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005401930.1 COG2010 Cytochrome c, mono- and diheme variants YP_005401931.1 COG2303 Choline dehydrogenase and related flavoproteins YP_005401934.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005401935.1 COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific YP_005401936.1 COG2223 Nitrate/nitrite transporter YP_005401937.1 COG1937 Uncharacterized protein conserved in bacteria YP_005401938.1 COG2215 ABC-type uncharacterized transport system, permease component YP_005401939.1 COG0657 Esterase/lipase YP_005401940.1 COG0583 Transcriptional regulator YP_005401942.1 COG0177 Predicted EndoIII-related endonuclease YP_005401943.1 COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE YP_005401944.1 COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG YP_005401945.1 COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD YP_005401946.1 COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC YP_005401947.1 COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB YP_005401948.1 COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA YP_005401950.1 COG3069 C4-dicarboxylate transporter YP_005401951.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005401952.1 COG2186 Transcriptional regulators YP_005401953.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005401954.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005401955.1 COG1175 ABC-type sugar transport systems, permease components YP_005401956.1 COG0395 ABC-type sugar transport system, permease component YP_005401957.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005401958.1 COG0477 Permeases of the major facilitator superfamily YP_005401959.1 COG0583 Transcriptional regulator YP_005401960.1 COG1940 Transcriptional regulator/sugar kinase YP_005401961.1 COG0132 Dethiobiotin synthetase YP_005401962.1 COG0477 Permeases of the major facilitator superfamily YP_005401963.1 COG1178 ABC-type Fe3+ transport system, permease component YP_005401964.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_005401965.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_005401966.1 COG2160 L-arabinose isomerase YP_005401967.1 COG1069 Ribulose kinase YP_005401968.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005401969.1 COG1129 ABC-type sugar transport system, ATPase component YP_005401970.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005401971.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005401972.1 COG1312 D-mannonate dehydratase YP_005401973.1 COG2186 Transcriptional regulators YP_005401978.1 COG1192 ATPases involved in chromosome partitioning YP_005401980.1 COG0457 FOG: TPR repeat YP_005401981.1 COG3741 N-formylglutamate amidohydrolase YP_005401982.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_005401983.1 COG2188 Transcriptional regulators YP_005401984.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005401985.1 COG3758 Uncharacterized protein conserved in bacteria YP_005401986.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005401987.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_005401988.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005401989.1 COG2986 Histidine ammonia-lyase YP_005401990.1 COG2987 Urocanate hydratase YP_005401991.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_005401992.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005401993.1 COG0371 Glycerol dehydrogenase and related enzymes YP_005401994.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005401996.1 COG0141 Histidinol dehydrogenase YP_005401997.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005401998.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_005401999.1 COG0583 Transcriptional regulator YP_005402000.1 COG0165 Argininosuccinate lyase YP_005402001.1 COG0765 ABC-type amino acid transport system, permease component YP_005402002.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005402003.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005402004.1 COG0726 Predicted xylanase/chitin deacetylase YP_005402005.1 COG0726 Predicted xylanase/chitin deacetylase YP_005402006.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_005402007.1 COG0673 Predicted dehydrogenases and related proteins YP_005402008.1 COG0385 Predicted Na+-dependent transporter YP_005402009.1 COG1816 Adenosine deaminase YP_005402010.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_005402011.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005402012.1 COG1609 Transcriptional regulators YP_005402014.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005402015.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_005402016.1 COG1566 Multidrug resistance efflux pump YP_005402017.1 COG1846 Transcriptional regulators YP_005402018.1 COG0346 Lactoylglutathione lyase and related lyases YP_005402019.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005402020.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_005402021.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005402022.1 COG0588 Phosphoglycerate mutase 1 YP_005402023.1 COG1409 Predicted phosphohydrolases YP_005402024.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_005402025.1 COG2818 3-methyladenine DNA glycosylase YP_005402028.1 COG0114 Fumarase YP_005402029.1 COG1482 Phosphomannose isomerase YP_005402030.1 COG5339 Uncharacterized protein conserved in bacteria YP_005402031.1 COG4619 ABC-type uncharacterized transport system, ATPase component YP_005402032.1 COG0390 ABC-type uncharacterized transport system, permease component YP_005402033.1 COG1802 Transcriptional regulators YP_005402035.1 COG1178 ABC-type Fe3+ transport system, permease component YP_005402036.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_005402037.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005402038.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_005402039.1 COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B YP_005402040.1 COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A YP_005402041.1 COG1309 Transcriptional regulator YP_005402042.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005402043.1 COG1940 Transcriptional regulator/sugar kinase YP_005402044.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005402045.1 COG1175 ABC-type sugar transport systems, permease components YP_005402046.1 COG0395 ABC-type sugar transport system, permease component YP_005402047.1 COG0524 Sugar kinases, ribokinase family YP_005402048.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005402049.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005402050.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_005402051.1 COG2252 Permeases YP_005402052.1 COG0583 Transcriptional regulator YP_005402053.1 COG1742 Uncharacterized conserved protein YP_005402057.1 COG0607 Rhodanese-related sulfurtransferase YP_005402058.1 COG5553 Predicted metal-dependent enzyme of the double-stranded beta helix superfamily YP_005402059.1 COG0583 Transcriptional regulator YP_005402060.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005402061.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005402062.1 COG0693 Putative intracellular protease/amidase YP_005402064.1 COG0477 Permeases of the major facilitator superfamily YP_005402065.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005402066.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005402067.1 COG4776 Exoribonuclease II YP_005402068.1 COG0583 Transcriptional regulator YP_005402069.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005402070.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_005402071.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_005402072.1 COG2840 Uncharacterized protein conserved in bacteria YP_005402073.1 COG3769 Predicted hydrolase (HAD superfamily) YP_005402074.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005402075.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005402076.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_005402077.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005402078.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_005402079.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_005402081.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_005402082.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402083.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402084.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402085.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005402086.1 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005402087.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005402088.1 COG1142 Fe-S-cluster-containing hydrogenase components 2 YP_005402089.1 COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol YP_005402091.1 COG2303 Choline dehydrogenase and related flavoproteins YP_005402092.1 COG2010 Cytochrome c, mono- and diheme variants YP_005402093.1 COG3385 FOG: Transposase and inactivated derivatives YP_005402094.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005402095.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005402096.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005402097.1 COG2912 Uncharacterized conserved protein YP_005402098.1 COG3094 Uncharacterized protein conserved in bacteria YP_005402099.1 COG2890 Methylase of polypeptide chain release factors YP_005402100.1 COG0216 Protein chain release factor A YP_005402101.1 COG0373 Glutamyl-tRNA reductase YP_005402102.1 COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis YP_005402103.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005402104.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005402106.1 COG0193 Peptidyl-tRNA hydrolase YP_005402107.1 COG2217 Cation transport ATPase YP_005402108.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005402109.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005402110.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005402111.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005402112.1 COG0012 Predicted GTPase, probable translation factor YP_005402113.1 COG1403 Restriction endonuclease YP_005402114.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005402115.1 COG3547 Transposase and inactivated derivatives YP_005402116.1 COG0642 Signal transduction histidine kinase YP_005402117.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005402118.1 COG0778 Nitroreductase YP_005402119.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_005402120.1 COG1846 Transcriptional regulators YP_005402121.1 COG1737 Transcriptional regulators YP_005402122.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005402123.1 COG3665 Uncharacterized conserved protein YP_005402124.1 COG3665 Uncharacterized conserved protein YP_005402125.1 COG0765 ABC-type amino acid transport system, permease component YP_005402126.1 COG0765 ABC-type amino acid transport system, permease component YP_005402127.1 COG3665 Uncharacterized conserved protein YP_005402128.1 COG2085 Predicted dinucleotide-binding enzymes YP_005402129.1 COG0583 Transcriptional regulator YP_005402132.1 COG3385 FOG: Transposase and inactivated derivatives YP_005402133.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005402134.1 COG0471 Di- and tricarboxylate transporters YP_005402135.1 COG1802 Transcriptional regulators YP_005402136.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402137.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402138.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402139.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005402140.1 COG2515 1-aminocyclopropane-1-carboxylate deaminase YP_005402141.1 COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog YP_005402142.1 COG2897 Rhodanese-related sulfurtransferase YP_005402143.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005402145.1 COG0625 Glutathione S-transferase YP_005402146.1 COG0583 Transcriptional regulator YP_005402147.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005402148.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005402149.1 COG3545 Predicted esterase of the alpha/beta hydrolase fold YP_005402150.1 COG1522 Transcriptional regulators YP_005402152.1 COG0642 Signal transduction histidine kinase YP_005402153.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005402154.1 COG3713 Outer membrane protein V YP_005402156.1 COG4283 Uncharacterized conserved protein YP_005402158.1 COG0640 Predicted transcriptional regulators YP_005402159.1 COG0477 Permeases of the major facilitator superfamily YP_005402161.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005402162.1 COG2837 Predicted iron-dependent peroxidase YP_005402163.1 COG2822 Predicted periplasmic lipoprotein involved in iron transport YP_005402164.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005402165.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005402166.1 COG0586 Uncharacterized membrane-associated protein YP_005402167.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_005402168.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_005402169.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005402170.1 COG2610 H+/gluconate symporter and related permeases YP_005402171.1 COG3265 Gluconate kinase YP_005402174.1 COG1981 Predicted membrane protein YP_005402175.1 COG1309 Transcriptional regulator YP_005402176.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005402177.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005402178.1 COG2188 Transcriptional regulators YP_005402179.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005402180.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005402181.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase YP_005402182.1 COG2986 Histidine ammonia-lyase YP_005402183.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_005402184.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005402185.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005402186.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005402187.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005402189.1 COG0583 Transcriptional regulator YP_005402190.1 COG1741 Pirin-related protein YP_005402191.1 COG3423 Predicted transcriptional regulator YP_005402193.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005402194.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005402195.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005402196.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005402197.1 COG0765 ABC-type amino acid transport system, permease component YP_005402198.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005402199.1 COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) YP_005402200.1 COG0765 ABC-type amino acid transport system, permease component YP_005402201.1 COG0765 ABC-type amino acid transport system, permease component YP_005402202.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005402203.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005402204.1 COG0007 Uroporphyrinogen-III methylase YP_005402205.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005402206.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005402207.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_005402208.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005402209.1 COG3707 Response regulator with putative antiterminator output domain YP_005402210.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005402213.1 COG2378 Predicted transcriptional regulator YP_005402215.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005402216.1 COG1264 Phosphotransferase system IIB components YP_005402217.1 COG1609 Transcriptional regulators YP_005402220.1 COG0215 Cysteinyl-tRNA synthetase YP_005402222.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_005402223.1 COG2186 Transcriptional regulators YP_005402224.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005402225.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005402226.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402227.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402228.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402229.1 COG0405 Gamma-glutamyltransferase YP_005402230.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005402231.1 COG4114 Uncharacterized Fe-S protein YP_005402233.1 COG0477 Permeases of the major facilitator superfamily YP_005402234.1 COG1737 Transcriptional regulators YP_005402235.1 COG0371 Glycerol dehydrogenase and related enzymes YP_005402236.1 COG0006 Xaa-Pro aminopeptidase YP_005402237.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005402238.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005402239.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402240.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402241.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402242.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005402243.1 COG2188 Transcriptional regulators YP_005402244.1 COG0583 Transcriptional regulator YP_005402245.1 COG2362 D-aminopeptidase YP_005402246.1 COG3191 L-aminopeptidase/D-esterase YP_005402247.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402248.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402249.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402250.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005402251.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005402252.1 COG3367 Uncharacterized conserved protein YP_005402253.1 COG3203 Outer membrane protein (porin) YP_005402255.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005402258.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005402260.1 COG2181 Nitrate reductase gamma subunit YP_005402261.1 COG2180 Nitrate reductase delta subunit YP_005402262.1 COG1140 Nitrate reductase beta subunit YP_005402263.1 COG5013 Nitrate reductase alpha subunit YP_005402264.1 COG0598 Mg2+ and Co2+ transporters YP_005402265.1 COG0038 Chloride channel protein EriC YP_005402266.1 COG3549 Plasmid maintenance system killer protein YP_005402267.1 COG3093 Plasmid maintenance system antidote protein YP_005402268.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402269.1 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005402270.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005402271.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402272.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402273.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402274.1 COG3703 Uncharacterized protein involved in cation transport YP_005402275.1 COG4572 Putative cation transport regulator YP_005402276.1 COG0387 Ca2+/H+ antiporter YP_005402277.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_005402278.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005402279.1 COG2837 Predicted iron-dependent peroxidase YP_005402280.1 COG2822 Predicted periplasmic lipoprotein involved in iron transport YP_005402281.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005402282.1 COG0591 Na+/proline symporter YP_005402283.1 COG0506 Proline dehydrogenase YP_005402284.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005402285.1 COG0765 ABC-type amino acid transport system, permease component YP_005402286.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005402287.1 COG2515 1-aminocyclopropane-1-carboxylate deaminase YP_005402289.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005402290.1 COG1344 Flagellin and related hook-associated proteins YP_005402291.1 COG1345 Flagellar capping protein YP_005402292.1 COG1516 Flagellin-specific chaperone FliS YP_005402294.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005402296.1 COG0401 Uncharacterized homolog of Blt101 YP_005402303.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005402305.1 COG3781 Predicted membrane protein YP_005402307.1 COG1677 Flagellar hook-basal body protein YP_005402308.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_005402309.1 COG1536 Flagellar motor switch protein YP_005402310.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005402311.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005402312.1 COG2882 Flagellar biosynthesis chaperone YP_005402313.1 COG3144 Flagellar hook-length control protein YP_005402314.1 COG1580 Flagellar basal body-associated protein YP_005402315.1 COG1868 Flagellar motor switch protein YP_005402316.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_005402317.1 COG3190 Flagellar biogenesis protein YP_005402318.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_005402319.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_005402320.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_005402321.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_005402323.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_005402324.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_005402325.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_005402326.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_005402328.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_005402329.1 COG0778 Nitroreductase YP_005402330.1 COG0695 Glutaredoxin and related proteins YP_005402332.1 COG2985 Predicted permease YP_005402334.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005402338.1 COG0346 Lactoylglutathione lyase and related lyases YP_005402339.1 COG3203 Outer membrane protein (porin) YP_005402342.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005402343.1 COG0671 Membrane-associated phospholipid phosphatase YP_005402344.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005402345.1 COG3136 Uncharacterized membrane protein required for alginate biosynthesis YP_005402346.1 COG0560 Phosphoserine phosphatase YP_005402347.1 COG0583 Transcriptional regulator YP_005402348.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005402349.1 COG0477 Permeases of the major facilitator superfamily YP_005402350.1 COG2133 Glucose/sorbosone dehydrogenases YP_005402351.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005402352.1 COG2211 Na+/melibiose symporter and related transporters YP_005402353.1 COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases YP_005402354.1 COG1609 Transcriptional regulators YP_005402355.1 COG4214 ABC-type xylose transport system, permease component YP_005402356.1 COG1129 ABC-type sugar transport system, ATPase component YP_005402357.1 COG4213 ABC-type xylose transport system, periplasmic component YP_005402358.1 COG2115 Xylose isomerase YP_005402359.1 COG1070 Sugar (pentulose and hexulose) kinases YP_005402360.1 COG1359 Uncharacterized conserved protein YP_005402361.1 COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes YP_005402362.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005402363.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005402364.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005402365.1 COG1129 ABC-type sugar transport system, ATPase component YP_005402366.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_005402367.1 COG1070 Sugar (pentulose and hexulose) kinases YP_005402369.1 COG0176 Transaldolase YP_005402370.1 COG1180 Pyruvate-formate lyase-activating enzyme YP_005402371.1 COG1882 Pyruvate-formate lyase YP_005402372.1 COG1349 Transcriptional regulators of sugar metabolism YP_005402373.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005402375.1 COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins YP_005402376.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_005402378.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_005402379.1 COG3771 Predicted membrane protein YP_005402380.1 COG0671 Membrane-associated phospholipid phosphatase YP_005402381.1 COG0807 GTP cyclohydrolase II YP_005402382.1 COG1048 Aconitase A YP_005402383.1 COG0583 Transcriptional regulator YP_005402384.1 COG0550 Topoisomerase IA YP_005402386.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005402387.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005402388.1 COG2109 ATP:corrinoid adenosyltransferase YP_005402389.1 COG2038 NaMN:DMB phosphoribosyltransferase YP_005402390.1 COG0406 Fructose-2,6-bisphosphatase YP_005402391.1 COG0368 Cobalamin-5-phosphate synthase YP_005402392.1 COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase YP_005402393.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005402394.1 COG0009 Putative translation factor (SUA5) YP_005402395.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_005402396.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005402397.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005402398.1 COG0547 Anthranilate phosphoribosyltransferase YP_005402399.1 COG0134 Indole-3-glycerol phosphate synthase YP_005402400.1 COG0133 Tryptophan synthase beta chain YP_005402401.1 COG0159 Tryptophan synthase alpha chain YP_005402402.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_005402403.1 COG3047 Outer membrane protein W YP_005402404.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005402406.1 COG2917 Intracellular septation protein A YP_005402407.1 COG1607 Acyl-CoA hydrolase YP_005402408.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005402409.1 COG2350 Uncharacterized protein conserved in bacteria YP_005402410.1 COG3809 Uncharacterized protein conserved in bacteria YP_005402411.1 COG0675 Transposase and inactivated derivatives YP_005402412.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005402413.1 COG3099 Uncharacterized protein conserved in bacteria YP_005402414.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005402415.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005402416.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402417.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402419.1 COG2095 Multiple antibiotic transporter YP_005402420.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005402421.1 COG1435 Thymidine kinase YP_005402422.1 COG2916 DNA-binding protein H-NS YP_005402423.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005402424.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005402425.1 COG0784 FOG: CheY-like receiver YP_005402426.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005402427.1 COG3012 Uncharacterized protein conserved in bacteria YP_005402428.1 COG0788 Formyltetrahydrofolate hydrolase YP_005402429.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005402430.1 COG5476 Uncharacterized conserved protein YP_005402431.1 COG1940 Transcriptional regulator/sugar kinase YP_005402432.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402433.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402434.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402435.1 COG1940 Transcriptional regulator/sugar kinase YP_005402436.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005402437.1 COG0253 Diaminopimelate epimerase YP_005402438.1 COG0477 Permeases of the major facilitator superfamily YP_005402439.1 COG3384 Uncharacterized conserved protein YP_005402440.1 COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_005402441.1 COG0757 3-dehydroquinate dehydratase II YP_005402443.1 COG0438 Glycosyltransferase YP_005402444.1 COG0583 Transcriptional regulator YP_005402445.1 COG2120 Uncharacterized proteins, LmbE homologs YP_005402446.1 COG0684 Demethylmenaquinone methyltransferase YP_005402447.1 COG2828 Uncharacterized protein conserved in bacteria YP_005402448.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005402449.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005402450.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402451.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402452.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402453.1 COG2173 D-alanyl-D-alanine dipeptidase YP_005402454.1 COG1737 Transcriptional regulators YP_005402455.1 COG0366 Glycosidases YP_005402456.1 COG0366 Glycosidases YP_005402457.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005402458.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_005402459.1 COG0395 ABC-type sugar transport system, permease component YP_005402460.1 COG1175 ABC-type sugar transport systems, permease components YP_005402461.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005402462.1 COG0583 Transcriptional regulator YP_005402463.1 COG1264 Phosphotransferase system IIB components YP_005402464.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005402465.1 COG0477 Permeases of the major facilitator superfamily YP_005402466.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005402467.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_005402468.1 COG3734 2-keto-3-deoxy-galactonokinase YP_005402469.1 COG2186 Transcriptional regulators YP_005402470.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005402472.1 COG0582 Integrase YP_005402473.1 COG1280 Putative threonine efflux protein YP_005402477.1 COG3680 Uncharacterized protein conserved in bacteria YP_005402478.1 COG2162 Arylamine N-acetyltransferase YP_005402479.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005402480.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005402481.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005402482.1 COG2049 Allophanate hydrolase subunit 1 YP_005402483.1 COG1984 Allophanate hydrolase subunit 2 YP_005402484.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005402485.1 COG0583 Transcriptional regulator YP_005402486.1 COG0511 Biotin carboxyl carrier protein YP_005402487.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_005402488.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_005402489.1 COG0765 ABC-type amino acid transport system, permease component YP_005402490.1 COG0765 ABC-type amino acid transport system, permease component YP_005402491.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005402492.1 COG2315 Uncharacterized protein conserved in bacteria YP_005402493.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_005402495.1 COG0583 Transcriptional regulator YP_005402496.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005402497.1 COG2011 ABC-type metal ion transport system, permease component YP_005402498.1 COG1135 ABC-type metal ion transport system, ATPase component YP_005402499.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005402500.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_005402501.1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component YP_005402502.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_005402503.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_005402504.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_005402506.1 COG0840 Methyl-accepting chemotaxis protein YP_005402507.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005402508.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_005402509.1 COG0845 Membrane-fusion protein YP_005402511.1 COG3501 Uncharacterized protein conserved in bacteria YP_005402515.1 COG3768 Predicted membrane protein YP_005402516.1 COG3106 Predicted ATPase YP_005402518.1 COG1983 Putative stress-responsive transcriptional regulator YP_005402520.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_005402521.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain YP_005402522.1 COG0523 Putative GTPases (G3E family) YP_005402523.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005402524.1 COG4168 ABC-type antimicrobial peptide transport system, permease component YP_005402525.1 COG4171 ABC-type antimicrobial peptide transport system, permease component YP_005402526.1 COG4170 ABC-type antimicrobial peptide transport system, ATPase component YP_005402527.1 COG4167 ABC-type antimicrobial peptide transport system, ATPase component YP_005402528.1 COG4950 Uncharacterized protein conserved in bacteria YP_005402529.1 COG3104 Dipeptide/tripeptide permease YP_005402530.1 COG1045 Serine acetyltransferase YP_005402531.1 COG2203 FOG: GAF domain YP_005402532.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005402534.1 COG2199 FOG: GGDEF domain YP_005402535.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005402536.1 COG0625 Glutathione S-transferase YP_005402537.1 COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase YP_005402538.1 COG0162 Tyrosyl-tRNA synthetase YP_005402539.1 COG0259 Pyridoxamine-phosphate oxidase YP_005402540.1 COG3895 Predicted periplasmic protein YP_005402541.1 COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases YP_005402542.1 COG3133 Outer membrane lipoprotein YP_005402543.1 COG1846 Transcriptional regulators YP_005402545.1 COG1566 Multidrug resistance efflux pump YP_005402546.1 COG1289 Predicted membrane protein YP_005402547.1 COG4989 Predicted oxidoreductase YP_005402548.1 COG3313 Predicted Fe-S protein YP_005402549.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005402550.1 COG0346 Lactoylglutathione lyase and related lyases YP_005402551.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005402552.1 COG0278 Glutaredoxin-related protein YP_005402553.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005402555.1 COG1609 Transcriptional regulators YP_005402556.1 COG0583 Transcriptional regulator YP_005402557.1 COG0477 Permeases of the major facilitator superfamily YP_005402558.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_005402559.1 COG0307 Riboflavin synthase alpha chain YP_005402560.1 COG0534 Na+-driven multidrug efflux pump YP_005402561.1 COG0469 Pyruvate kinase YP_005402562.1 COG0469 Pyruvate kinase YP_005402563.1 COG4238 Murein lipoprotein YP_005402565.1 COG1376 Uncharacterized protein conserved in bacteria YP_005402566.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_005402567.1 COG0520 Selenocysteine lyase YP_005402568.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005402569.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_005402570.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005402571.1 COG0316 Uncharacterized conserved protein YP_005402573.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005402574.1 COG0277 FAD/FMN-containing dehydrogenases YP_005402575.1 COG0628 Predicted permease YP_005402576.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005402577.1 COG1806 Uncharacterized protein conserved in bacteria YP_005402578.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005402579.1 COG3720 Putative heme degradation protein YP_005402580.1 COG4558 ABC-type hemin transport system, periplasmic component YP_005402581.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005402582.1 COG4559 ABC-type hemin transport system, ATPase component YP_005402583.1 COG0397 Uncharacterized conserved protein YP_005402584.1 COG2200 FOG: EAL domain YP_005402585.1 COG0095 Lipoate-protein ligase A YP_005402587.1 COG2263 Predicted RNA methylase YP_005402588.1 COG4928 Predicted P-loop ATPase YP_005402589.1 COG0833 Amino acid transporters YP_005402593.1 COG3772 Phage-related lysozyme (muraminidase) YP_005402594.1 COG1196 Chromosome segregation ATPases YP_005402597.1 COG4733 Phage-related protein, tail component YP_005402609.1 COG5511 Bacteriophage capsid protein YP_005402610.1 COG5525 Bacteriophage tail assembly protein YP_005402611.1 COG0642 Signal transduction histidine kinase YP_005402621.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005402622.1 COG0095 Lipoate-protein ligase A YP_005402623.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005402624.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005402625.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005402626.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_005402627.1 COG0726 Predicted xylanase/chitin deacetylase YP_005402628.1 COG0223 Methionyl-tRNA formyltransferase YP_005402629.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005402630.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005402631.1 COG4138 ABC-type cobalamin transport system, ATPase component YP_005402632.1 COG0386 Glutathione peroxidase YP_005402633.1 COG4139 ABC-type cobalamin transport system, permease component YP_005402636.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005402637.1 COG0073 EMAP domain YP_005402638.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005402639.1 COG0292 Ribosomal protein L20 YP_005402640.1 COG0291 Ribosomal protein L35 YP_005402641.1 COG0290 Translation initiation factor 3 (IF-3) YP_005402642.1 COG0441 Threonyl-tRNA synthetase YP_005402643.1 COG2095 Multiple antibiotic transporter YP_005402644.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005402645.1 COG3001 Fructosamine-3-kinase YP_005402647.1 COG0637 Predicted phosphatase/phosphohexomutase YP_005402648.1 COG3717 5-keto 4-deoxyuronate isomerase YP_005402649.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005402650.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_005402651.1 COG1823 Predicted Na+/dicarboxylate symporter YP_005402652.1 COG1414 Transcriptional regulator YP_005402653.1 COG0477 Permeases of the major facilitator superfamily YP_005402654.1 COG0501 Zn-dependent protease with chaperone function YP_005402655.1 COG3547 Transposase and inactivated derivatives YP_005402656.1 COG0793 Periplasmic protease YP_005402657.1 COG3109 Activator of osmoprotectant transporter ProP YP_005402658.1 COG1956 GAF domain-containing protein YP_005402659.1 COG2995 Uncharacterized paraquat-inducible protein A YP_005402660.1 COG3008 Paraquat-inducible protein B YP_005402661.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_005402662.1 COG2202 FOG: PAS/PAC domain YP_005402665.1 COG4405 Uncharacterized protein conserved in bacteria YP_005402669.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005402670.1 COG3921 Uncharacterized protein conserved in bacteria YP_005402671.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005402672.1 COG0840 Methyl-accepting chemotaxis protein YP_005402674.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005402676.1 COG2801 Transposase and inactivated derivatives YP_005402677.1 COG2801 Transposase and inactivated derivatives YP_005402678.1 COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen YP_005402679.1 COG5518 Bacteriophage capsid portal protein YP_005402680.1 COG2801 Transposase and inactivated derivatives YP_005402681.1 COG2801 Transposase and inactivated derivatives YP_005402682.1 COG5518 Bacteriophage capsid portal protein YP_005402683.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005402686.1 COG0582 Integrase YP_005402688.1 COG1276 Putative copper export protein YP_005402689.1 COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC YP_005402690.1 COG1528 Ferritin-like protein YP_005402692.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005402694.1 COG1770 Protease II YP_005402696.1 COG0513 Superfamily II DNA and RNA helicases YP_005402697.1 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) YP_005402698.1 COG3140 Uncharacterized protein conserved in bacteria YP_005402699.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005402700.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005402701.1 COG1760 L-serine deaminase YP_005402702.1 COG2200 FOG: EAL domain YP_005402703.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005402704.1 COG2893 Phosphotransferase system, mannose/fructose-specific component IIA YP_005402705.1 COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC YP_005402706.1 COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID YP_005402707.1 COG4811 Predicted membrane protein YP_005402708.1 COG1971 Predicted membrane protein YP_005402709.1 COG0500 SAM-dependent methyltransferases YP_005402710.1 COG1496 Uncharacterized conserved protein YP_005402711.1 COG1278 Cold shock proteins YP_005402712.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005402718.1 COG3468 Type V secretory pathway, adhesin AidA YP_005402722.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005402727.1 COG0538 Isocitrate dehydrogenases YP_005402728.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005402729.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005402730.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005402731.1 COG2915 Uncharacterized protein involved in purine metabolism YP_005402732.1 COG0015 Adenylosuccinate lyase YP_005402733.1 COG3547 Transposase and inactivated derivatives YP_005402734.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005402735.1 COG0642 Signal transduction histidine kinase YP_005402736.1 COG2850 Uncharacterized conserved protein YP_005402738.1 COG3547 Transposase and inactivated derivatives YP_005402739.1 COG2195 Di- and tripeptidases YP_005402740.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_005402741.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005402742.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005402743.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005402744.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005402745.1 COG3134 Predicted outer membrane lipoprotein YP_005402746.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_005402747.1 COG3150 Predicted esterase YP_005402748.1 COG1472 Beta-glucosidase-related glycosidases YP_005402749.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_005402750.1 COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) YP_005402751.1 COG5633 Predicted periplasmic lipoprotein YP_005402752.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005402753.1 COG3547 Transposase and inactivated derivatives YP_005402754.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005402755.1 COG0084 Mg-dependent DNase YP_005402756.1 COG0470 ATPase involved in DNA replication YP_005402757.1 COG0125 Thymidylate kinase YP_005402758.1 COG1559 Predicted periplasmic solute-binding protein YP_005402759.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005402760.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005402761.1 COG0236 Acyl carrier protein YP_005402762.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005402763.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005402764.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005402765.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005402766.1 COG0333 Ribosomal protein L32 YP_005402767.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_005402768.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005402769.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005402770.1 COG1530 Ribonucleases G and E YP_005402771.1 COG1359 Uncharacterized conserved protein YP_005402772.1 COG0418 Dihydroorotase YP_005402773.1 COG0133 Tryptophan synthase beta chain YP_005402775.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005402776.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005402777.1 COG0628 Predicted permease YP_005402778.1 COG0841 Cation/multidrug efflux pump YP_005402779.1 COG0845 Membrane-fusion protein YP_005402780.1 COG3038 Cytochrome B561 YP_005402781.1 COG2353 Uncharacterized conserved protein YP_005402782.1 COG1054 Predicted sulfurtransferase YP_005402783.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005402784.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005402785.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005402786.1 COG2259 Predicted membrane protein YP_005402787.1 COG0477 Permeases of the major facilitator superfamily YP_005402790.1 COG3802 Uncharacterized protein conserved in bacteria YP_005402791.1 COG5645 Predicted periplasmic lipoprotein YP_005402792.1 COG2943 Membrane glycosyltransferase YP_005402793.1 COG3131 Periplasmic glucans biosynthesis protein YP_005402794.1 COG3594 Fucose 4-O-acetylase and related acetyltransferases YP_005402795.1 COG1566 Multidrug resistance efflux pump YP_005402796.1 COG0477 Permeases of the major facilitator superfamily YP_005402797.1 COG1414 Transcriptional regulator YP_005402798.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005402806.1 COG3449 DNA gyrase inhibitor YP_005402807.1 COG1349 Transcriptional regulators of sugar metabolism YP_005402808.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_005402810.1 COG0558 Phosphatidylglycerophosphate synthase YP_005402811.1 COG0322 Nuclease subunit of the excinuclease complex YP_005402812.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005402815.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005402816.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_005402819.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005402820.1 COG5368 Uncharacterized protein conserved in bacteria YP_005402821.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_005402822.1 COG1309 Transcriptional regulator YP_005402823.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005402824.1 COG1335 Amidases related to nicotinamidase YP_005402825.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005402826.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005402827.1 COG0778 Nitroreductase YP_005402828.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_005402829.1 COG2233 Xanthine/uracil permeases YP_005402830.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005402831.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402832.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005402833.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005402834.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005402835.1 COG4950 Uncharacterized protein conserved in bacteria YP_005402837.1 COG1129 ABC-type sugar transport system, ATPase component YP_005402838.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005402839.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005402840.1 COG1396 Predicted transcriptional regulators YP_005402841.1 COG0789 Predicted transcriptional regulators YP_005402842.1 COG0362 6-phosphogluconate dehydrogenase YP_005402843.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005402844.1 COG2907 Predicted NAD/FAD-binding protein YP_005402845.1 COG3496 Uncharacterized conserved protein YP_005402846.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_005402850.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005402852.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005402853.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005402854.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005402855.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_005402856.1 COG0477 Permeases of the major facilitator superfamily YP_005402858.1 COG0583 Transcriptional regulator YP_005402859.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005402860.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005402861.1 COG2978 Putative p-aminobenzoyl-glutamate transporter YP_005402862.1 COG3662 Uncharacterized protein conserved in bacteria YP_005402863.1 COG1309 Transcriptional regulator YP_005402869.1 COG4679 Phage-related protein YP_005402870.1 COG5606 Uncharacterized conserved small protein YP_005402871.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005402873.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005402874.1 COG2850 Uncharacterized conserved protein YP_005402875.1 COG3639 ABC-type phosphate/phosphonate transport system, permease component YP_005402876.1 COG3639 ABC-type phosphate/phosphonate transport system, permease component YP_005402877.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_005402878.1 COG3638 ABC-type phosphate/phosphonate transport system, ATPase component YP_005402879.1 COG0277 FAD/FMN-containing dehydrogenases YP_005402882.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005402883.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005402884.1 COG0042 tRNA-dihydrouridine synthase YP_005402885.1 COG0477 Permeases of the major facilitator superfamily YP_005402886.1 COG2345 Predicted transcriptional regulator YP_005402887.1 COG0513 Superfamily II DNA and RNA helicases YP_005402888.1 COG0477 Permeases of the major facilitator superfamily YP_005402889.1 COG0670 Integral membrane protein, interacts with FtsH YP_005402890.1 COG0314 Molybdopterin converting factor, large subunit YP_005402891.1 COG1977 Molybdopterin converting factor, small subunit YP_005402892.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_005402893.1 COG0521 Molybdopterin biosynthesis enzymes YP_005402894.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_005402895.1 COG0391 Uncharacterized conserved protein YP_005402896.1 COG1335 Amidases related to nicotinamidase YP_005402897.1 COG4628 Uncharacterized conserved protein YP_005402898.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005402899.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_005402900.1 COG0132 Dethiobiotin synthetase YP_005402901.1 COG0500 SAM-dependent methyltransferases YP_005402902.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005402903.1 COG0502 Biotin synthase and related enzymes YP_005402904.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005402905.1 COG0583 Transcriptional regulator YP_005402906.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005402907.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005402908.1 COG3700 Acid phosphatase (class B) YP_005402909.1 COG2130 Putative NADP-dependent oxidoreductases YP_005402910.1 COG0693 Putative intracellular protease/amidase YP_005402911.1 COG1881 Phospholipid-binding protein YP_005402912.1 COG4677 Pectin methylesterase YP_005402913.1 COG0840 Methyl-accepting chemotaxis protein YP_005402914.1 COG2706 3-carboxymuconate cyclase YP_005402915.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005402916.1 COG3423 Predicted transcriptional regulator YP_005402917.1 COG1396 Predicted transcriptional regulators YP_005402918.1 COG4148 ABC-type molybdate transport system, ATPase component YP_005402919.1 COG4149 ABC-type molybdate transport system, permease component YP_005402920.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_005402922.1 COG2005 N-terminal domain of molybdenum-binding protein YP_005402923.1 COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA YP_005402924.1 COG0477 Permeases of the major facilitator superfamily YP_005402925.1 COG0583 Transcriptional regulator YP_005402926.1 COG1087 UDP-glucose 4-epimerase YP_005402927.1 COG1085 Galactose-1-phosphate uridylyltransferase YP_005402928.1 COG0153 Galactokinase YP_005402929.1 COG2017 Galactose mutarotase and related enzymes YP_005402931.1 COG0588 Phosphoglycerate mutase 1 YP_005402935.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005402936.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005402938.1 COG1230 Co/Zn/Cd efflux system component YP_005402939.1 COG3201 Nicotinamide mononucleotide transporter YP_005402940.1 COG0379 Quinolinate synthase YP_005402942.1 COG1729 Uncharacterized protein conserved in bacteria YP_005402943.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005402944.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005402945.1 COG3064 Membrane protein involved in colicin uptake YP_005402946.1 COG0848 Biopolymer transport protein YP_005402947.1 COG0811 Biopolymer transport proteins YP_005402948.1 COG0824 Predicted thioesterase YP_005402949.1 COG3790 Predicted membrane protein YP_005402950.1 COG4890 Predicted outer membrane lipoprotein YP_005402951.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005402952.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005402953.1 COG3385 FOG: Transposase and inactivated derivatives YP_005402954.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_005402955.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005402956.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005402957.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005402958.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005402959.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005402960.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_005402961.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005402962.1 COG0372 Citrate synthase YP_005402963.1 COG3468 Type V secretory pathway, adhesin AidA YP_005402964.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_005402965.1 COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) YP_005402966.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_005402967.1 COG1984 Allophanate hydrolase subunit 2 YP_005402968.1 COG2049 Allophanate hydrolase subunit 1 YP_005402969.1 COG0477 Permeases of the major facilitator superfamily YP_005402970.1 COG0327 Uncharacterized conserved protein YP_005402971.1 COG5212 Low-affinity cAMP phosphodiesterase YP_005402972.1 COG0415 Deoxyribodipyrimidine photolyase YP_005402973.1 COG1683 Uncharacterized conserved protein YP_005402975.1 COG2060 K+-transporting ATPase, A chain YP_005402976.1 COG2216 High-affinity K+ transport system, ATPase chain B YP_005402977.1 COG2156 K+-transporting ATPase, c chain YP_005402978.1 COG2205 Osmosensitive K+ channel histidine kinase YP_005402979.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005402980.1 COG1695 Predicted transcriptional regulators YP_005402981.1 COG0033 Phosphoglucomutase YP_005402982.1 COG3057 Negative regulator of replication initiationR YP_005402983.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005402985.1 COG0840 Methyl-accepting chemotaxis protein YP_005402986.1 COG0716 Flavodoxins YP_005402987.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005402990.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005402991.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005402992.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005402993.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase YP_005402994.1 COG1940 Transcriptional regulator/sugar kinase YP_005402995.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005402996.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_005402997.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005402998.1 COG0621 2-methylthioadenine synthetase YP_005403000.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_005403001.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_005403002.1 COG0319 Predicted metal-dependent hydrolase YP_005403003.1 COG4535 Putative Mg2+ and Co2+ transporter CorC YP_005403004.1 COG0815 Apolipoprotein N-acyltransferase YP_005403005.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005403006.1 COG0765 ABC-type amino acid transport system, permease component YP_005403007.1 COG0765 ABC-type amino acid transport system, permease component YP_005403008.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005403010.1 COG0495 Leucyl-tRNA synthetase YP_005403011.1 COG2980 Rare lipoprotein B YP_005403012.1 COG1466 DNA polymerase III, delta subunit YP_005403013.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005403014.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005403015.1 COG1576 Uncharacterized conserved protein YP_005403016.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005403017.1 COG0772 Bacterial cell division membrane protein YP_005403018.1 COG0797 Lipoproteins YP_005403019.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005403020.1 COG2921 Uncharacterized conserved protein YP_005403021.1 COG0321 Lipoate-protein ligase B YP_005403023.1 COG0320 Lipoate synthase YP_005403024.1 COG1826 Sec-independent protein secretion pathway components YP_005403025.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005403026.1 COG0765 ABC-type amino acid transport system, permease component YP_005403027.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005403028.1 COG0388 Predicted amidohydrolase YP_005403029.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005403030.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005403031.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005403032.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005403033.1 COG1309 Transcriptional regulator YP_005403034.1 COG0477 Permeases of the major facilitator superfamily YP_005403035.1 COG1278 Cold shock proteins YP_005403036.1 COG3416 Uncharacterized protein conserved in bacteria YP_005403037.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005403038.1 COG1505 Serine proteases of the peptidase family S9A YP_005403039.1 COG0248 Exopolyphosphatase YP_005403041.1 COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005403043.1 COG2199 FOG: GGDEF domain YP_005403044.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005403045.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005403046.1 COG0477 Permeases of the major facilitator superfamily YP_005403048.1 COG5587 Uncharacterized conserved protein YP_005403050.1 COG3210 Large exoproteins involved in heme utilization or adhesion YP_005403051.1 COG2831 Hemolysin activation/secretion protein YP_005403052.1 COG0671 Membrane-associated phospholipid phosphatase YP_005403053.1 COG0039 Malate/lactate dehydrogenases YP_005403054.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005403055.1 COG2501 Uncharacterized conserved protein YP_005403058.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005403059.1 COG4519 Uncharacterized protein conserved in bacteria YP_005403060.1 COG0841 Cation/multidrug efflux pump YP_005403061.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_005403062.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005403063.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_005403065.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005403066.1 COG1932 Phosphoserine aminotransferase YP_005403067.1 COG0400 Predicted esterase YP_005403068.1 COG1444 Predicted P-loop ATPase fused to an acetyltransferase YP_005403069.1 COG2707 Predicted membrane protein YP_005403070.1 COG2321 Predicted metalloprotease YP_005403071.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_005403072.1 COG3317 Uncharacterized lipoprotein YP_005403073.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005403074.1 COG2716 Glycine cleavage system regulatory protein YP_005403075.1 COG1225 Peroxiredoxin YP_005403076.1 COG0628 Predicted permease YP_005403077.1 COG4783 Putative Zn-dependent protease, contains TPR repeats YP_005403078.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_005403079.1 COG0593 ATPase involved in DNA replication initiation YP_005403080.1 COG2233 Xanthine/uracil permeases YP_005403081.1 COG0035 Uracil phosphoribosyltransferase YP_005403082.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_005403083.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_005403084.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005403085.1 COG0855 Polyphosphate kinase YP_005403086.1 COG0248 Exopolyphosphatase YP_005403087.1 COG2200 FOG: EAL domain YP_005403090.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005403091.1 COG2202 FOG: PAS/PAC domain YP_005403092.1 COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase YP_005403093.1 COG0215 Cysteinyl-tRNA synthetase YP_005403094.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005403095.1 COG2908 Uncharacterized protein conserved in bacteria YP_005403096.1 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA YP_005403097.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_005403098.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_005403099.1 COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component YP_005403100.1 COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component YP_005403101.1 COG2755 Lysophospholipase L1 and related esterases YP_005403102.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005403103.1 COG3118 Thioredoxin domain-containing protein YP_005403104.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005403105.1 COG1585 Membrane protein implicated in regulation of membrane protease activity YP_005403106.1 COG0789 Predicted transcriptional regulators YP_005403107.1 COG2217 Cation transport ATPase YP_005403108.1 COG3735 Uncharacterized protein conserved in bacteria YP_005403109.1 COG2606 Uncharacterized conserved protein YP_005403110.1 COG0477 Permeases of the major facilitator superfamily YP_005403112.1 COG4651 Kef-type K+ transport system, predicted NAD-binding component YP_005403113.1 COG0524 Sugar kinases, ribokinase family YP_005403114.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005403115.1 COG0563 Adenylate kinase and related kinases YP_005403116.1 COG0326 Molecular chaperone, HSP90 family YP_005403117.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005403118.1 COG0718 Uncharacterized protein conserved in bacteria YP_005403119.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005403120.1 COG0366 Glycosidases YP_005403121.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005403122.1 COG2832 Uncharacterized protein conserved in bacteria YP_005403123.1 COG3923 Primosomal replication protein N'' YP_005403125.1 COG3264 Small-conductance mechanosensitive channel YP_005403126.1 COG1309 Transcriptional regulator YP_005403127.1 COG0845 Membrane-fusion protein YP_005403128.1 COG0841 Cation/multidrug efflux pump YP_005403129.1 COG0254 Ribosomal protein L31 YP_005403130.1 COG0257 Ribosomal protein L36 YP_005403131.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005403132.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005403133.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005403137.1 COG0583 Transcriptional regulator YP_005403138.1 COG1001 Adenine deaminase YP_005403139.1 COG2252 Permeases YP_005403140.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase YP_005403141.1 COG3126 Uncharacterized protein conserved in bacteria YP_005403142.1 COG1946 Acyl-CoA thioesterase YP_005403143.1 COG0004 Ammonia permease YP_005403144.1 COG0347 Nitrogen regulatory protein PII YP_005403145.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005403146.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005403147.1 COG1522 Transcriptional regulators YP_005403148.1 COG0031 Cysteine synthase YP_005403149.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005403150.1 COG4533 ABC-type uncharacterized transport system, periplasmic component YP_005403151.1 COG0603 Predicted PP-loop superfamily ATPase YP_005403152.1 COG0824 Predicted thioesterase YP_005403153.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_005403154.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005403155.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005403156.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005403157.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005403158.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005403159.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005403160.1 COG0271 Stress-induced morphogen (activity unknown) YP_005403161.1 COG3056 Uncharacterized lipoprotein YP_005403162.1 COG0477 Permeases of the major facilitator superfamily YP_005403163.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005403164.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005403165.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005403166.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_005403167.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_005403168.1 COG0477 Permeases of the major facilitator superfamily YP_005403169.1 COG0673 Predicted dehydrogenases and related proteins YP_005403170.1 COG1666 Uncharacterized protein conserved in bacteria YP_005403171.1 COG1893 Ketopantoate reductase YP_005403172.1 COG0693 Putative intracellular protease/amidase YP_005403173.1 COG0301 Thiamine biosynthesis ATP pyrophosphatase YP_005403174.1 COG1722 Exonuclease VII small subunit YP_005403175.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005403176.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005403177.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005403178.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005403179.1 COG0611 Thiamine monophosphate kinase YP_005403180.1 COG0781 Transcription termination factor YP_005403181.1 COG0054 Riboflavin synthase beta-chain YP_005403182.1 COG0117 Pyrimidine deaminase YP_005403183.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_005403185.1 COG0341 Preprotein translocase subunit SecF YP_005403186.1 COG0342 Preprotein translocase subunit SecD YP_005403187.1 COG1862 Preprotein translocase subunit YajC YP_005403188.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005403189.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005403190.1 COG3124 Uncharacterized protein conserved in bacteria YP_005403191.1 COG0450 Peroxiredoxin YP_005403192.1 COG0405 Gamma-glutamyltransferase YP_005403193.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005403194.1 COG1114 Branched-chain amino acid permeases YP_005403195.1 COG0620 Methionine synthase II (cobalamin-independent) YP_005403196.1 COG4737 Uncharacterized protein conserved in bacteria YP_005403197.1 COG2944 Predicted transcriptional regulator YP_005403198.1 COG0642 Signal transduction histidine kinase YP_005403199.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005403200.1 COG0420 DNA repair exonuclease YP_005403201.1 COG0419 ATPase involved in DNA repair YP_005403202.1 COG0419 ATPase involved in DNA repair YP_005403203.1 COG3440 Predicted restriction endonuclease YP_005403204.1 COG1940 Transcriptional regulator/sugar kinase YP_005403205.1 COG2974 DNA recombination-dependent growth factor C YP_005403206.1 COG3123 Uncharacterized protein conserved in bacteria YP_005403210.1 COG1414 Transcriptional regulator YP_005403212.1 COG0703 Shikimate kinase YP_005403213.1 COG3963 Phospholipid N-methyltransferase YP_005403215.1 COG2354 Uncharacterized protein conserved in bacteria YP_005403216.1 COG0500 SAM-dependent methyltransferases YP_005403217.1 COG1396 Predicted transcriptional regulators YP_005403218.1 COG3385 FOG: Transposase and inactivated derivatives YP_005403219.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005403220.1 COG2897 Rhodanese-related sulfurtransferase YP_005403221.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_005403222.1 COG3239 Fatty acid desaturase YP_005403226.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_005403227.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_005403228.1 COG0590 Cytosine/adenosine deaminases YP_005403229.1 COG0560 Phosphoserine phosphatase YP_005403230.1 COG1264 Phosphotransferase system IIB components YP_005403231.1 COG2103 Predicted sugar phosphate isomerase YP_005403232.1 COG1737 Transcriptional regulators YP_005403233.1 COG1145 Ferredoxin YP_005403234.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005403235.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_005403236.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_005403237.1 COG1159 GTPase YP_005403238.1 COG0571 dsRNA-specific ribonuclease YP_005403239.1 COG0681 Signal peptidase I YP_005403240.1 COG0481 Membrane GTPase LepA YP_005403242.1 COG3086 Positive regulator of sigma E activity YP_005403243.1 COG3026 Negative regulator of sigma E activity YP_005403244.1 COG3073 Negative regulator of sigma E activity YP_005403245.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005403246.1 COG0029 Aspartate oxidase YP_005403247.1 COG4123 Predicted O-methyltransferase YP_005403248.1 COG0513 Superfamily II DNA and RNA helicases YP_005403249.1 COG3445 Acid-induced glycyl radical enzyme YP_005403250.1 COG0692 Uracil DNA glycosylase YP_005403251.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005403252.1 COG0061 Predicted sugar kinase YP_005403253.1 COG0497 ATPase involved in DNA repair YP_005403254.1 COG2913 Small protein A (tmRNA-binding) YP_005403255.1 COG3385 FOG: Transposase and inactivated derivatives YP_005403256.1 COG2914 Uncharacterized protein conserved in bacteria YP_005403257.1 COG2867 Oligoketide cyclase/lipid transport protein YP_005403258.1 COG0691 tmRNA-binding protein YP_005403259.1 COG0582 Integrase YP_005403261.1 COG0640 Predicted transcriptional regulators YP_005403262.1 COG0607 Rhodanese-related sulfurtransferase YP_005403263.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_005403264.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005403265.1 COG1349 Transcriptional regulators of sugar metabolism YP_005403266.1 COG4573 Predicted tagatose 6-phosphate kinase YP_005403267.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005403268.1 COG3414 Phosphotransferase system, galactitol-specific IIB component YP_005403269.1 COG3775 Phosphotransferase system, galactitol-specific IIC component YP_005403270.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005403271.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005403272.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005403273.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005403274.1 COG2169 Adenosine deaminase YP_005403275.1 COG1247 Sortase and related acyltransferases YP_005403276.1 COG1396 Predicted transcriptional regulators YP_005403277.1 COG2234 Predicted aminopeptidases YP_005403278.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005403279.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005403280.1 COG0583 Transcriptional regulator YP_005403281.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_005403282.1 COG3486 Lysine/ornithine N-monooxygenase YP_005403283.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_005403284.1 COG1896 Predicted hydrolases of HD superfamily YP_005403285.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005403286.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005403287.1 COG1409 Predicted phosphohydrolases YP_005403288.1 COG0395 ABC-type sugar transport system, permease component YP_005403289.1 COG1175 ABC-type sugar transport systems, permease components YP_005403290.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005403292.1 COG0524 Sugar kinases, ribokinase family YP_005403293.1 COG1940 Transcriptional regulator/sugar kinase YP_005403294.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005403295.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005403296.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005403297.1 COG1129 ABC-type sugar transport system, ATPase component YP_005403298.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005403299.1 COG1349 Transcriptional regulators of sugar metabolism YP_005403300.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005403301.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_005403302.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_005403303.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_005403304.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005403305.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005403306.1 COG0006 Xaa-Pro aminopeptidase YP_005403307.1 COG3079 Uncharacterized protein conserved in bacteria YP_005403308.1 COG3027 Uncharacterized protein conserved in bacteria YP_005403309.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005403311.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005403312.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005403315.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005403316.1 COG0120 Ribose 5-phosphate isomerase YP_005403317.1 COG0583 Transcriptional regulator YP_005403318.1 COG0583 Transcriptional regulator YP_005403319.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005403320.1 COG2968 Uncharacterized conserved protein YP_005403321.1 COG1279 Lysine efflux permease YP_005403322.1 COG0668 Small-conductance mechanosensitive channel YP_005403323.1 COG0477 Permeases of the major facilitator superfamily YP_005403324.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_005403325.1 COG1609 Transcriptional regulators YP_005403326.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005403327.1 COG0126 3-phosphoglycerate kinase YP_005403328.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005403329.1 COG0021 Transketolase YP_005403330.1 COG0501 Zn-dependent protease with chaperone function YP_005403331.1 COG3539 P pilus assembly protein, pilin FimA YP_005403332.1 COG3121 P pilus assembly protein, chaperone PapD YP_005403333.1 COG3188 P pilus assembly protein, porin PapC YP_005403338.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_005403339.1 COG0192 S-adenosylmethionine synthetase YP_005403346.1 COG0477 Permeases of the major facilitator superfamily YP_005403347.1 COG3091 Uncharacterized protein conserved in bacteria YP_005403348.1 COG2356 Endonuclease I YP_005403349.1 COG1385 Uncharacterized protein conserved in bacteria YP_005403350.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_005403351.1 COG1678 Putative transcriptional regulator YP_005403352.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005403353.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_005403354.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_005403355.1 COG0345 Pyrroline-5-carboxylate reductase YP_005403356.1 COG0762 Predicted integral membrane protein YP_005403357.1 COG1872 Uncharacterized conserved protein YP_005403358.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_005403359.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005403361.1 COG2066 Glutaminase YP_005403362.1 COG3171 Uncharacterized protein conserved in bacteria YP_005403363.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005403364.1 COG1194 A/G-specific DNA glycosylase YP_005403365.1 COG2924 Fe-S cluster protector protein YP_005403366.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005403367.1 COG0438 Glycosyltransferase YP_005403369.1 COG0438 Glycosyltransferase YP_005403370.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005403371.1 COG0438 Glycosyltransferase YP_005403373.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005403374.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_005403375.1 COG0394 Protein-tyrosine-phosphatase YP_005403376.1 COG1596 Periplasmic protein involved in polysaccharide export YP_005403377.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005403378.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_005403379.1 COG0477 Permeases of the major facilitator superfamily YP_005403380.1 COG2731 Beta-galactosidase, beta subunit YP_005403381.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005403382.1 COG1349 Transcriptional regulators of sugar metabolism YP_005403383.1 COG3568 Metal-dependent hydrolase YP_005403384.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005403385.1 COG0392 Predicted integral membrane protein YP_005403386.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_005403387.1 COG0840 Methyl-accepting chemotaxis protein YP_005403388.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005403389.1 COG1089 GDP-D-mannose dehydratase YP_005403390.1 COG0438 Glycosyltransferase YP_005403391.1 COG1109 Phosphomannomutase YP_005403392.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_005403393.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005403394.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005403396.1 COG0438 Glycosyltransferase YP_005403397.1 COG0438 Glycosyltransferase YP_005403400.1 COG0438 Glycosyltransferase YP_005403401.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_005403402.1 COG0394 Protein-tyrosine-phosphatase YP_005403403.1 COG1596 Periplasmic protein involved in polysaccharide export YP_005403404.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_005403408.1 COG2200 FOG: EAL domain YP_005403409.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005403410.1 COG0474 Cation transport ATPase YP_005403411.1 COG0845 Membrane-fusion protein YP_005403412.1 COG0841 Cation/multidrug efflux pump YP_005403417.1 COG1396 Predicted transcriptional regulators YP_005403418.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_005403420.1 COG0531 Amino acid transporters YP_005403421.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005403422.1 COG1280 Putative threonine efflux protein YP_005403424.1 COG4291 Predicted membrane protein YP_005403425.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005403426.1 COG0765 ABC-type amino acid transport system, permease component YP_005403427.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005403428.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_005403430.1 COG0583 Transcriptional regulator YP_005403431.1 COG3926 Putative secretion activating protein YP_005403432.1 COG3710 DNA-binding winged-HTH domains YP_005403433.1 COG3325 Chitinase YP_005403434.1 COG0583 Transcriptional regulator YP_005403435.1 COG0477 Permeases of the major facilitator superfamily YP_005403436.1 COG5430 Uncharacterized secreted protein YP_005403437.1 COG5430 Uncharacterized secreted protein YP_005403438.1 COG5430 Uncharacterized secreted protein YP_005403439.1 COG3121 P pilus assembly protein, chaperone PapD YP_005403440.1 COG3188 P pilus assembly protein, porin PapC YP_005403441.1 COG5430 Uncharacterized secreted protein YP_005403442.1 COG1278 Cold shock proteins YP_005403443.1 COG3145 Alkylated DNA repair protein YP_005403444.1 COG0169 Shikimate 5-dehydrogenase YP_005403445.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005403446.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005403447.1 COG0477 Permeases of the major facilitator superfamily YP_005403448.1 COG3835 Sugar diacid utilization regulator YP_005403449.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005403450.1 COG0232 dGTP triphosphohydrolase YP_005403451.1 COG0775 Nucleoside phosphorylase YP_005403452.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005403454.1 COG0316 Uncharacterized conserved protein YP_005403455.1 COG0038 Chloride channel protein EriC YP_005403456.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005403457.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005403458.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005403459.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005403460.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005403461.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005403462.1 COG1643 HrpA-like helicases YP_005403463.1 COG1514 2'-5' RNA ligase YP_005403464.1 COG1489 DNA-binding protein, stimulates sugar fermentation YP_005403465.1 COG1734 DnaK suppressor protein YP_005403466.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005403467.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005403468.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005403469.1 COG0642 Signal transduction histidine kinase YP_005403470.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005403471.1 COG0413 Ketopantoate hydroxymethyltransferase YP_005403472.1 COG0414 Panthothenate synthetase YP_005403473.1 COG0853 Aspartate 1-decarboxylase YP_005403474.1 COG0842 ABC-type multidrug transport system, permease component YP_005403475.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005403476.1 COG0288 Carbonic anhydrase YP_005403477.1 COG0582 Integrase YP_005403478.1 COG1396 Predicted transcriptional regulators YP_005403479.1 COG0605 Superoxide dismutase YP_005403483.1 COG1734 DnaK suppressor protein YP_005403487.1 COG5518 Bacteriophage capsid portal protein YP_005403493.1 COG5004 P2-like prophage tail protein X YP_005403495.1 COG3772 Phage-related lysozyme (muraminidase) YP_005403501.1 COG1432 Uncharacterized conserved protein YP_005403504.1 COG4540 Phage P2 baseplate assembly protein gpV YP_005403505.1 COG3628 Phage baseplate assembly protein W YP_005403506.1 COG3948 Phage-related baseplate assembly protein YP_005403507.1 COG4385 Bacteriophage P2-related tail formation protein YP_005403508.1 COG5301 Phage-related tail fibre protein YP_005403510.1 COG3497 Phage tail sheath protein FI YP_005403511.1 COG3498 Phage tail tube protein FII YP_005403514.1 COG5280 Phage-related minor tail protein YP_005403516.1 COG3499 Phage protein U YP_005403519.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005403522.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase YP_005403523.1 COG1349 Transcriptional regulators of sugar metabolism YP_005403524.1 COG4578 Glucitol operon activator YP_005403525.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005403526.1 COG3731 Phosphotransferase system sorbitol-specific component IIA YP_005403527.1 COG3732 Phosphotransferase system sorbitol-specific component IIBC YP_005403528.1 COG3730 Phosphotransferase system sorbitol-specific component IIC YP_005403529.1 COG2132 Putative multicopper oxidases YP_005403531.1 COG0421 Spermidine synthase YP_005403532.1 COG1586 S-adenosylmethionine decarboxylase YP_005403534.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005403535.1 COG3112 Uncharacterized protein conserved in bacteria YP_005403536.1 COG1049 Aconitase B YP_005403538.1 COG3539 P pilus assembly protein, pilin FimA YP_005403539.1 COG3539 P pilus assembly protein, pilin FimA YP_005403540.1 COG4134 ABC-type uncharacterized transport system, periplasmic component YP_005403541.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_005403542.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_005403543.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_005403544.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005403545.1 COG1940 Transcriptional regulator/sugar kinase YP_005403546.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005403547.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005403549.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005403550.1 COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component YP_005403551.1 COG2186 Transcriptional regulators YP_005403552.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005403553.1 COG2211 Na+/melibiose symporter and related transporters YP_005403554.1 COG3940 Predicted beta-xylosidase YP_005403555.1 COG3725 Membrane protein required for beta-lactamase induction YP_005403556.1 COG3023 Negative regulator of beta-lactamase expression YP_005403557.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_005403558.1 COG4969 Tfp pilus assembly protein, major pilin PilA YP_005403559.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_005403560.1 COG1459 Type II secretory pathway, component PulF YP_005403561.1 COG0516 IMP dehydrogenase/GMP reductase YP_005403562.1 COG0237 Dephospho-CoA kinase YP_005403563.1 COG4582 Uncharacterized protein conserved in bacteria YP_005403564.1 COG3024 Uncharacterized protein conserved in bacteria YP_005403565.1 COG3385 FOG: Transposase and inactivated derivatives YP_005403566.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005403567.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005403569.1 COG4701 Uncharacterized protein conserved in bacteria YP_005403570.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005403571.1 COG0206 Cell division GTPase YP_005403572.1 COG0849 Actin-like ATPase involved in cell division YP_005403573.1 COG1589 Cell division septal protein YP_005403574.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005403575.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005403576.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005403577.1 COG0772 Bacterial cell division membrane protein YP_005403578.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005403579.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005403580.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005403581.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005403582.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005403583.1 COG3116 Cell division protein YP_005403584.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005403585.1 COG2001 Uncharacterized protein conserved in bacteria YP_005403586.1 COG1609 Transcriptional regulators YP_005403587.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_005403588.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_005403589.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_005403590.1 COG0583 Transcriptional regulator YP_005403592.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_005403593.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005403594.1 COG0065 3-isopropylmalate dehydratase large subunit YP_005403595.1 COG0066 3-isopropylmalate dehydratase small subunit YP_005403597.1 COG0477 Permeases of the major facilitator superfamily YP_005403599.1 COG4533 ABC-type uncharacterized transport system, periplasmic component YP_005403600.1 COG4143 ABC-type thiamine transport system, periplasmic component YP_005403601.1 COG1178 ABC-type Fe3+ transport system, permease component YP_005403602.1 COG3840 ABC-type thiamine transport system, ATPase component YP_005403603.1 COG0586 Uncharacterized membrane-associated protein YP_005403604.1 COG0417 DNA polymerase elongation subunit (family B) YP_005403605.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005403606.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005403607.1 COG3468 Type V secretory pathway, adhesin AidA YP_005403608.1 COG1076 DnaJ-domain-containing proteins 1 YP_005403609.1 COG1452 Organic solvent tolerance protein OstA YP_005403610.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005403611.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_005403612.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005403613.1 COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport YP_005403614.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_005403615.1 COG0262 Dihydrofolate reductase YP_005403616.1 COG3610 Uncharacterized conserved protein YP_005403617.1 COG2966 Uncharacterized conserved protein YP_005403618.1 COG1280 Putative threonine efflux protein YP_005403619.1 COG0475 Kef-type K+ transport systems, membrane components YP_005403620.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005403621.1 COG3325 Chitinase YP_005403622.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005403623.1 COG0505 Carbamoylphosphate synthase small subunit YP_005403624.1 COG0289 Dihydrodipicolinate reductase YP_005403625.1 COG3203 Outer membrane protein (porin) YP_005403626.1 COG3386 Gluconolactonase YP_005403627.1 COG0761 Penicillin tolerance protein YP_005403628.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_005403629.1 COG0597 Lipoprotein signal peptidase YP_005403630.1 COG0060 Isoleucyl-tRNA synthetase YP_005403631.1 COG0196 FAD synthase YP_005403632.1 COG0268 Ribosomal protein S20 YP_005403633.1 COG0583 Transcriptional regulator YP_005403634.1 COG3004 Na+/H+ antiporter YP_005403635.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005403636.1 COG0443 Molecular chaperone YP_005403637.1 COG1584 Predicted membrane protein YP_005403638.1 COG0477 Permeases of the major facilitator superfamily YP_005403639.1 COG0521 Molybdopterin biosynthesis enzymes YP_005403640.1 COG0176 Transaldolase YP_005403641.1 COG1115 Na+/alanine symporter YP_005403642.1 COG3022 Uncharacterized protein conserved in bacteria YP_005403643.1 COG0498 Threonine synthase YP_005403644.1 COG0083 Homoserine kinase YP_005403645.1 COG0527 Aspartokinases YP_005403646.1 COG0565 rRNA methylase YP_005403647.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005403648.1 COG3045 Uncharacterized protein conserved in bacteria YP_005403649.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005403650.1 COG0406 Fructose-2,6-bisphosphatase YP_005403651.1 COG1986 Uncharacterized conserved protein YP_005403652.1 COG2973 Trp operon repressor YP_005403653.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005403654.1 COG0474 Cation transport ATPase YP_005403655.1 COG2771 DNA-binding HTH domain-containing proteins YP_005403656.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005403657.1 COG0583 Transcriptional regulator YP_005403658.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_005403661.1 COG1396 Predicted transcriptional regulators YP_005403662.1 COG1066 Predicted ATP-dependent serine protease YP_005403663.1 COG0560 Phosphoserine phosphatase YP_005403664.1 COG3726 Uncharacterized membrane protein affecting hemolysin expression YP_005403665.1 COG0640 Predicted transcriptional regulators YP_005403666.1 COG0813 Purine-nucleoside phosphorylase YP_005403667.1 COG1015 Phosphopentomutase YP_005403668.1 COG0213 Thymidine phosphorylase YP_005403669.1 COG0274 Deoxyribose-phosphate aldolase YP_005403670.1 COG0084 Mg-dependent DNase YP_005403671.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily YP_005403673.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_005403674.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_005403675.1 COG4108 Peptide chain release factor RF-3 YP_005403676.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_005403677.1 COG1396 Predicted transcriptional regulators YP_005403678.1 COG0456 Acetyltransferases YP_005403679.1 COG3050 DNA polymerase III, psi subunit YP_005403680.1 COG2813 16S RNA G1207 methylase RsmC YP_005403681.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005403682.1 COG0583 Transcriptional regulator YP_005403684.1 COG2199 FOG: GGDEF domain YP_005403686.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005403687.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005403688.1 COG1070 Sugar (pentulose and hexulose) kinases YP_005403689.1 COG4806 L-rhamnose isomerase YP_005403690.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005403691.1 COG1454 Alcohol dehydrogenase, class IV YP_005403692.1 COG3254 Uncharacterized conserved protein YP_005403693.1 COG1032 Fe-S oxidoreductase YP_005403695.1 COG2376 Dihydroxyacetone kinase YP_005403696.1 COG1760 L-serine deaminase YP_005403697.1 COG0814 Amino acid permeases YP_005403700.1 COG2199 FOG: GGDEF domain YP_005403701.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005403702.1 COG0583 Transcriptional regulator YP_005403703.1 COG3527 Alpha-acetolactate decarboxylase YP_005403704.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_005403705.1 COG1401 GTPase subunit of restriction endonuclease YP_005403706.1 COG4268 McrBC 5-methylcytosine restriction system component YP_005403708.1 COG3203 Outer membrane protein (porin) YP_005403710.1 COG0657 Esterase/lipase YP_005403711.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005403712.1 COG0795 Predicted permeases YP_005403713.1 COG0795 Predicted permeases YP_005403714.1 COG0260 Leucyl aminopeptidase YP_005403715.1 COG2927 DNA polymerase III, chi subunit YP_005403716.1 COG0525 Valyl-tRNA synthetase YP_005403717.1 COG0583 Transcriptional regulator YP_005403718.1 COG3539 P pilus assembly protein, pilin FimA YP_005403719.1 COG3188 P pilus assembly protein, porin PapC YP_005403720.1 COG3121 P pilus assembly protein, chaperone PapD YP_005403721.1 COG3539 P pilus assembly protein, pilin FimA YP_005403722.1 COG3539 P pilus assembly protein, pilin FimA YP_005403723.1 COG0501 Zn-dependent protease with chaperone function YP_005403724.1 COG4269 Predicted membrane protein YP_005403725.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005403726.1 COG1737 Transcriptional regulators YP_005403727.1 COG1264 Phosphotransferase system IIB components YP_005403728.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005403729.1 COG3076 Uncharacterized protein conserved in bacteria YP_005403730.1 COG0078 Ornithine carbamoyltransferase YP_005403731.1 COG0366 Glycosidases YP_005403732.1 COG2731 Beta-galactosidase, beta subunit YP_005403733.1 COG2235 Arginine deiminase YP_005403734.1 COG0549 Carbamate kinase YP_005403735.1 COG0078 Ornithine carbamoyltransferase YP_005403736.1 COG1288 Predicted membrane protein YP_005403737.1 COG1438 Arginine repressor YP_005403738.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005403739.1 COG1781 Aspartate carbamoyltransferase, regulatory subunit YP_005403740.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005403746.1 COG3501 Uncharacterized protein conserved in bacteria YP_005403748.1 COG2308 Uncharacterized conserved protein YP_005403749.1 COG2307 Uncharacterized protein conserved in bacteria YP_005403750.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_005403751.1 COG3484 Predicted proteasome-type protease YP_005403752.1 COG1609 Transcriptional regulators YP_005403754.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005403755.1 COG0637 Predicted phosphatase/phosphohexomutase YP_005403756.1 COG1554 Trehalose and maltose hydrolases (possible phosphorylases) YP_005403757.1 COG0673 Predicted dehydrogenases and related proteins YP_005403758.1 COG1082 Sugar phosphate isomerases/epimerases YP_005403759.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005403760.1 COG0395 ABC-type sugar transport system, permease component YP_005403761.1 COG1175 ABC-type sugar transport systems, permease components YP_005403762.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005403763.1 COG0366 Glycosidases YP_005403765.1 COG2721 Altronate dehydratase YP_005403766.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_005403767.1 COG1904 Glucuronate isomerase YP_005403768.1 COG0477 Permeases of the major facilitator superfamily YP_005403769.1 COG2186 Transcriptional regulators YP_005403770.1 COG0586 Uncharacterized membrane-associated protein YP_005403773.1 COG4575 Uncharacterized conserved protein YP_005403776.1 COG2259 Predicted membrane protein YP_005403777.1 COG0435 Predicted glutathione S-transferase YP_005403778.1 COG0583 Transcriptional regulator YP_005403779.1 COG1741 Pirin-related protein YP_005403787.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_005403788.1 COG1459 Type II secretory pathway, component PulF YP_005403790.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_005403791.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005403792.1 COG0313 Predicted methyltransferases YP_005403793.1 COG3107 Putative lipoprotein YP_005403794.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_005403795.1 COG0279 Phosphoheptose isomerase YP_005403796.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_005403797.1 COG3385 FOG: Transposase and inactivated derivatives YP_005403798.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005403799.1 COG0642 Signal transduction histidine kinase YP_005403800.1 COG0067 Glutamate synthase domain 1 YP_005403801.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_005403802.1 COG2969 Stringent starvation protein B YP_005403803.1 COG0625 Glutathione S-transferase YP_005403804.1 COG0103 Ribosomal protein S9 YP_005403805.1 COG0102 Ribosomal protein L13 YP_005403807.1 COG1485 Predicted ATPase YP_005403808.1 COG3105 Uncharacterized protein conserved in bacteria YP_005403809.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005403810.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005403811.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005403812.1 COG5007 Predicted transcriptional regulator, BolA superfamily YP_005403813.1 COG3113 Predicted NTP binding protein (contains STAS domain) YP_005403814.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_005403815.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005403816.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005403817.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005403818.1 COG0530 Ca2+/Na+ antiporter YP_005403819.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005403820.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_005403821.1 COG3117 Uncharacterized protein conserved in bacteria YP_005403822.1 COG1934 Uncharacterized protein conserved in bacteria YP_005403823.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005403824.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005403825.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_005403826.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005403827.1 COG1660 Predicted P-loop-containing kinase YP_005403828.1 COG1925 Phosphotransferase system, HPr-related proteins YP_005403829.1 COG3711 Transcriptional antiterminator YP_005403831.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_005403832.1 COG3964 Predicted amidohydrolase YP_005403837.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005403838.1 COG0782 Transcription elongation factor YP_005403839.1 COG3783 Soluble cytochrome b562 YP_005403840.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_005403841.1 COG3028 Uncharacterized protein conserved in bacteria YP_005403842.1 COG2732 Barstar, RNAse (barnase) inhibitor YP_005403843.1 COG4290 Guanyl-specific ribonuclease Sa YP_005403844.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005403845.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005403846.1 COG1289 Predicted membrane protein YP_005403847.1 COG1566 Multidrug resistance efflux pump YP_005403849.1 COG0583 Transcriptional regulator YP_005403850.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_005403851.1 COG3164 Predicted membrane protein YP_005403852.1 COG1530 Ribonucleases G and E YP_005403853.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005403854.1 COG2891 Cell shape-determining protein YP_005403855.1 COG1792 Cell shape-determining protein YP_005403856.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005403857.1 COG2199 FOG: GGDEF domain YP_005403858.1 COG2041 Sulfite oxidase and related enzymes YP_005403859.1 COG2717 Predicted membrane protein YP_005403860.1 COG0757 3-dehydroquinate dehydratase II YP_005403861.1 COG0511 Biotin carboxyl carrier protein YP_005403862.1 COG0439 Biotin carboxylase YP_005403863.1 COG3924 Predicted membrane protein YP_005403864.1 COG4145 Na+/panthothenate symporter YP_005403865.1 COG2264 Ribosomal protein L11 methylase YP_005403866.1 COG3338 Carbonic anhydrase YP_005403867.1 COG0042 tRNA-dihydrouridine synthase YP_005403868.1 COG2901 Factor for inversion stimulation Fis, transcriptional activator YP_005403869.1 COG2259 Predicted membrane protein YP_005403870.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005403872.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005403873.1 COG4597 ABC-type amino acid transport system, permease component YP_005403874.1 COG0765 ABC-type amino acid transport system, permease component YP_005403875.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005403876.1 COG1346 Putative effector of murein hydrolase YP_005403877.1 COG1380 Putative effector of murein hydrolase LrgA YP_005403878.1 COG0583 Transcriptional regulator YP_005403879.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_005403880.1 COG2252 Permeases YP_005403881.1 COG0625 Glutathione S-transferase YP_005403882.1 COG3300 MHYT domain (predicted integral membrane sensor domain) YP_005403883.1 COG0840 Methyl-accepting chemotaxis protein YP_005403884.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005403885.1 COG1280 Putative threonine efflux protein YP_005403886.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005403887.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_005403888.1 COG1718 Serine/threonine protein kinase involved in cell cycle control YP_005403889.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005403890.1 COG0625 Glutathione S-transferase YP_005403891.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005403892.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005403893.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005403894.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005403895.1 COG2337 Growth inhibitor YP_005403896.1 COG2336 Growth regulator YP_005403897.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005403898.1 COG0583 Transcriptional regulator YP_005403901.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005403902.1 COG1409 Predicted phosphohydrolases YP_005403904.1 COG0583 Transcriptional regulator YP_005403905.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005403906.1 COG0629 Single-stranded DNA-binding protein YP_005403907.1 COG0178 Excinuclease ATPase subunit YP_005403909.1 COG2188 Transcriptional regulators YP_005403910.1 COG2382 Enterochelin esterase and related enzymes YP_005403911.1 COG0583 Transcriptional regulator YP_005403912.1 COG0625 Glutathione S-transferase YP_005403913.1 COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase YP_005403914.1 COG2315 Uncharacterized protein conserved in bacteria YP_005403915.1 COG2211 Na+/melibiose symporter and related transporters YP_005403916.1 COG2211 Na+/melibiose symporter and related transporters YP_005403917.1 COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases YP_005403918.1 COG2942 N-acyl-D-glucosamine 2-epimerase YP_005403919.1 COG3684 Tagatose-1,6-bisphosphate aldolase YP_005403920.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005403921.1 COG0524 Sugar kinases, ribokinase family YP_005403922.1 COG1349 Transcriptional regulators of sugar metabolism YP_005403923.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_005403924.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005403925.1 COG1284 Uncharacterized conserved protein YP_005403926.1 COG1522 Transcriptional regulators YP_005403927.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005403928.1 COG0787 Alanine racemase YP_005403929.1 COG0305 Replicative DNA helicase YP_005403930.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_005403932.1 COG0042 tRNA-dihydrouridine synthase YP_005403933.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005403934.1 COG3237 Uncharacterized protein conserved in bacteria YP_005403935.1 COG0534 Na+-driven multidrug efflux pump YP_005403936.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_005403937.1 COG0818 Diacylglycerol kinase YP_005403938.1 COG2937 Glycerol-3-phosphate O-acyltransferase YP_005403939.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005403940.1 COG3161 4-hydroxybenzoate synthetase (chorismate lyase) YP_005403942.1 COG3223 Predicted membrane protein YP_005403943.1 COG0166 Glucose-6-phosphate isomerase YP_005403944.1 COG0527 Aspartokinases YP_005403945.1 COG0385 Predicted Na+-dependent transporter YP_005403946.1 COG1283 Na+/phosphate symporter YP_005403947.1 COG0560 Phosphoserine phosphatase YP_005403948.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_005403949.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_005403950.1 COG4132 ABC-type uncharacterized transport system, permease component YP_005403951.1 COG1524 Uncharacterized proteins of the AP superfamily YP_005403952.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_005403953.1 COG2188 Transcriptional regulators YP_005403954.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain YP_005403955.1 COG1414 Transcriptional regulator YP_005403956.1 COG4579 Isocitrate dehydrogenase kinase/phosphatase YP_005403957.1 COG2224 Isocitrate lyase YP_005403958.1 COG2225 Malate synthase YP_005403959.1 COG1897 Homoserine trans-succinylase YP_005403960.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_005403961.1 COG0151 Phosphoribosylamine-glycine ligase YP_005403963.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005403964.1 COG3068 Uncharacterized protein conserved in bacteria YP_005403965.1 COG1515 Deoxyinosine 3'endonuclease (endonuclease V) YP_005403966.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005403967.1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding YP_005403968.1 COG3160 Regulator of sigma D YP_005403969.1 COG0422 Thiamine biosynthesis protein ThiC YP_005403970.1 COG0352 Thiamine monophosphate synthase YP_005403971.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005403972.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_005403973.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_005403974.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005403975.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005403976.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005403977.1 COG0222 Ribosomal protein L7/L12 YP_005403978.1 COG0244 Ribosomal protein L10 YP_005403979.1 COG0081 Ribosomal protein L1 YP_005403980.1 COG0080 Ribosomal protein L11 YP_005403981.1 COG0250 Transcription antiterminator YP_005403982.1 COG0690 Preprotein translocase subunit SecE YP_005403983.1 COG0050 GTPases - translation elongation factors YP_005403984.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005403985.1 COG1072 Panthothenate kinase YP_005403986.1 COG1654 Biotin operon repressor YP_005403987.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005403988.1 COG4635 Flavodoxin YP_005403989.1 COG0168 Trk-type K+ transport systems, membrane components YP_005403990.1 COG1739 Uncharacterized conserved protein YP_005403991.1 COG0006 Xaa-Pro aminopeptidase YP_005403992.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005403993.1 COG0183 Acetyl-CoA acetyltransferase YP_005403994.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005403995.1 COG3340 Peptidase E YP_005403996.1 COG0250 Transcription antiterminator YP_005403997.1 COG0084 Mg-dependent DNase YP_005403998.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005403999.1 COG1826 Sec-independent protein secretion pathway components YP_005404000.1 COG1826 Sec-independent protein secretion pathway components YP_005404001.1 COG0661 Predicted unusual protein kinase YP_005404002.1 COG3165 Uncharacterized protein conserved in bacteria YP_005404003.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005404004.1 COG1322 Uncharacterized protein conserved in bacteria YP_005404005.1 COG0586 Uncharacterized membrane-associated protein YP_005404006.1 COG2820 Uridine phosphorylase YP_005404007.1 COG0753 Catalase YP_005404008.1 COG0412 Dienelactone hydrolase and related enzymes YP_005404009.1 COG0176 Transaldolase YP_005404010.1 COG1925 Phosphotransferase system, HPr-related proteins YP_005404011.1 COG1299 Phosphotransferase system, fructose-specific IIC component YP_005404012.1 COG1445 Phosphotransferase system fructose-specific component IIB YP_005404013.1 COG1882 Pyruvate-formate lyase YP_005404014.1 COG1180 Pyruvate-formate lyase-activating enzyme YP_005404015.1 COG1445 Phosphotransferase system fructose-specific component IIB YP_005404016.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005404018.1 COG0620 Methionine synthase II (cobalamin-independent) YP_005404019.1 COG0583 Transcriptional regulator YP_005404020.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005404023.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005404024.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005404025.1 COG0395 ABC-type sugar transport system, permease component YP_005404026.1 COG1175 ABC-type sugar transport systems, permease components YP_005404027.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005404028.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005404031.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005404032.1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component YP_005404033.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_005404034.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_005404035.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_005404036.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005404037.1 COG3547 Transposase and inactivated derivatives YP_005404038.1 COG3385 FOG: Transposase and inactivated derivatives YP_005404039.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005404040.1 COG2177 Cell division protein YP_005404041.1 COG2884 Predicted ATPase involved in cell division YP_005404042.1 COG0552 Signal recognition particle GTPase YP_005404043.1 COG0742 N6-adenine-specific methylase YP_005404044.1 COG3776 Predicted membrane protein YP_005404045.1 COG3714 Predicted membrane protein YP_005404046.1 COG2217 Cation transport ATPase YP_005404047.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_005404048.1 COG1738 Uncharacterized conserved protein YP_005404052.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005404053.1 COG2271 Sugar phosphate permease YP_005404054.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005404055.1 COG1109 Phosphomannomutase YP_005404056.1 COG1609 Transcriptional regulators YP_005404057.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005404058.1 COG1175 ABC-type sugar transport systems, permease components YP_005404059.1 COG0395 ABC-type sugar transport system, permease component YP_005404060.1 COG0366 Glycosidases YP_005404061.1 COG2152 Predicted glycosylase YP_005404063.1 COG2831 Hemolysin activation/secretion protein YP_005404064.1 COG3210 Large exoproteins involved in heme utilization or adhesion YP_005404069.1 COG1396 Predicted transcriptional regulators YP_005404070.1 COG3210 Large exoproteins involved in heme utilization or adhesion YP_005404072.1 COG3210 Large exoproteins involved in heme utilization or adhesion YP_005404073.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005404074.1 COG2267 Lysophospholipase YP_005404075.1 COG1280 Putative threonine efflux protein YP_005404076.1 COG1280 Putative threonine efflux protein YP_005404077.1 COG0514 Superfamily II DNA helicase YP_005404078.1 COG2829 Outer membrane phospholipase A YP_005404079.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005404080.1 COG2962 Predicted permeases YP_005404081.1 COG3180 Putative ammonia monooxygenase YP_005404082.1 COG0598 Mg2+ and Co2+ transporters YP_005404084.1 COG0210 Superfamily I DNA and RNA helicases YP_005404085.1 COG1011 Predicted hydrolase (HAD superfamily) YP_005404086.1 COG4973 Site-specific recombinase XerC YP_005404087.1 COG3159 Uncharacterized protein conserved in bacteria YP_005404088.1 COG0253 Diaminopimelate epimerase YP_005404089.1 COG5567 Predicted small periplasmic lipoprotein YP_005404090.1 COG3072 Adenylate cyclase YP_005404091.1 COG0181 Porphobilinogen deaminase YP_005404092.1 COG1587 Uroporphyrinogen-III synthase YP_005404093.1 COG2959 Uncharacterized enzyme of heme biosynthesis YP_005404094.1 COG3071 Uncharacterized enzyme of heme biosynthesis YP_005404095.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005404096.1 COG1922 Teichoic acid biosynthesis proteins YP_005404099.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005404100.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005404101.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005404102.1 COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase YP_005404103.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_005404104.1 COG3765 Chain length determinant protein YP_005404105.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005404106.1 COG1158 Transcription termination factor YP_005404107.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005404108.1 COG0513 Superfamily II DNA and RNA helicases YP_005404109.1 COG0248 Exopolyphosphatase YP_005404110.1 COG0210 Superfamily I DNA and RNA helicases YP_005404111.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005404112.1 COG0059 Ketol-acid reductoisomerase YP_005404113.1 COG0583 Transcriptional regulator YP_005404114.1 COG1171 Threonine dehydratase YP_005404115.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005404116.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005404117.1 COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit YP_005404118.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_005404119.1 COG0477 Permeases of the major facilitator superfamily YP_005404120.1 COG0606 Predicted ATPase with chaperone activity YP_005404121.1 COG3085 Uncharacterized protein conserved in bacteria YP_005404122.1 COG0583 Transcriptional regulator YP_005404123.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005404124.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005404125.1 COG1129 ABC-type sugar transport system, ATPase component YP_005404126.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005404127.1 COG2801 Transposase and inactivated derivatives YP_005404128.1 COG2801 Transposase and inactivated derivatives YP_005404129.1 COG0796 Glutamate racemase YP_005404130.1 COG4206 Outer membrane cobalamin receptor protein YP_005404131.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_005404132.1 COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins YP_005404133.1 COG2211 Na+/melibiose symporter and related transporters YP_005404135.1 COG1309 Transcriptional regulator YP_005404136.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005404137.1 COG0583 Transcriptional regulator YP_005404138.1 COG0678 Peroxiredoxin YP_005404139.1 COG0165 Argininosuccinate lyase YP_005404140.1 COG0548 Acetylglutamate kinase YP_005404141.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_005404142.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005404143.1 COG2352 Phosphoenolpyruvate carboxylase YP_005404144.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_005404145.1 COG0527 Aspartokinases YP_005404146.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005404147.1 COG3060 Transcriptional regulator of met regulon YP_005404148.1 COG0254 Ribosomal protein L31 YP_005404149.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005404150.1 COG1609 Transcriptional regulators YP_005404151.1 COG3087 Cell division protein YP_005404152.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005404153.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005404154.1 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_005404155.1 COG0684 Demethylmenaquinone methyltransferase YP_005404156.1 COG3074 Uncharacterized protein conserved in bacteria YP_005404157.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_005404158.1 COG0554 Glycerol kinase YP_005404159.1 COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins YP_005404160.1 COG0477 Permeases of the major facilitator superfamily YP_005404161.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_005404162.1 COG3152 Predicted membrane protein YP_005404164.1 COG0149 Triosephosphate isomerase YP_005404165.1 COG1613 ABC-type sulfate transport system, periplasmic component YP_005404166.1 COG0205 6-phosphofructokinase YP_005404167.1 COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein YP_005404168.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005404169.1 COG0642 Signal transduction histidine kinase YP_005404170.1 COG0219 Predicted rRNA methylase (SpoU class) YP_005404171.1 COG1045 Serine acetyltransferase YP_005404172.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005404173.1 COG1952 Preprotein translocase subunit SecB YP_005404174.1 COG0695 Glutaredoxin and related proteins YP_005404175.1 COG0607 Rhodanese-related sulfurtransferase YP_005404176.1 COG0696 Phosphoglyceromutase YP_005404177.1 COG4942 Membrane-bound metallopeptidase YP_005404178.1 COG2861 Uncharacterized protein conserved in bacteria YP_005404179.1 COG0438 Glycosyltransferase YP_005404181.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005404182.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005404183.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005404184.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005404185.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005404186.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005404187.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005404188.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005404189.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005404190.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005404191.1 COG0438 Glycosyltransferase YP_005404192.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005404193.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005404194.1 COG0669 Phosphopantetheine adenylyltransferase YP_005404195.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_005404196.1 COG0267 Ribosomal protein L33 YP_005404197.1 COG0227 Ribosomal protein L28 YP_005404198.1 COG2003 DNA repair proteins YP_005404199.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005404200.1 COG0756 dUTPase YP_005404201.1 COG1309 Transcriptional regulator YP_005404202.1 COG4929 Uncharacterized membrane-anchored protein YP_005404204.1 COG0461 Orotate phosphoribosyltransferase YP_005404205.1 COG0689 RNase PH YP_005404206.1 COG1561 Uncharacterized stress-induced protein YP_005404207.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005404208.1 COG1309 Transcriptional regulator YP_005404209.1 COG2860 Predicted membrane protein YP_005404210.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005404211.1 COG0194 Guanylate kinase YP_005404212.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005404213.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005404214.1 COG0566 rRNA methylases YP_005404215.1 COG1200 RecG-like helicase YP_005404216.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005404217.1 COG0786 Na+/glutamate symporter YP_005404218.1 COG2233 Xanthine/uracil permeases YP_005404220.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005404221.1 COG1490 D-Tyr-tRNAtyr deacylase YP_005404222.1 COG1295 Predicted membrane protein YP_005404223.1 COG1011 Predicted hydrolase (HAD superfamily) YP_005404224.1 COG1217 Predicted membrane GTPase involved in stress response YP_005404225.1 COG0174 Glutamine synthetase YP_005404226.1 COG3852 Signal transduction histidine kinase, nitrogen specific YP_005404227.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005404228.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005404229.1 COG3078 Uncharacterized protein conserved in bacteria YP_005404231.1 COG0218 Predicted GTPase YP_005404232.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005404233.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005404234.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_005404235.1 COG3084 Uncharacterized protein conserved in bacteria YP_005404236.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_005404237.1 COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein YP_005404238.1 COG2186 Transcriptional regulators YP_005404239.1 COG1609 Transcriptional regulators YP_005404240.1 COG0524 Sugar kinases, ribokinase family YP_005404241.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005404242.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005404243.1 COG1129 ABC-type sugar transport system, ATPase component YP_005404244.1 COG1869 ABC-type ribose transport system, auxiliary component YP_005404245.1 COG3158 K+ transporter YP_005404246.1 COG0714 MoxR-like ATPases YP_005404247.1 COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_005404248.1 COG1522 Transcriptional regulators YP_005404249.1 COG0716 Flavodoxins YP_005404250.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005404251.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005404252.1 COG3312 F0F1-type ATP synthase, subunit I YP_005404253.1 COG0356 F0F1-type ATP synthase, subunit a YP_005404254.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005404255.1 COG0711 F0F1-type ATP synthase, subunit b YP_005404256.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005404257.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005404258.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005404259.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005404260.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005404261.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005404262.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005404263.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005404264.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_005404265.1 COG0573 ABC-type phosphate transport system, permease component YP_005404266.1 COG0581 ABC-type phosphate transport system, permease component YP_005404267.1 COG1117 ABC-type phosphate transport system, ATPase component YP_005404268.1 COG0704 Phosphate uptake regulator YP_005404269.1 COG1309 Transcriptional regulator YP_005404270.1 COG1082 Sugar phosphate isomerases/epimerases YP_005404271.1 COG0637 Predicted phosphatase/phosphohexomutase YP_005404272.1 COG2252 Permeases YP_005404273.1 COG0431 Predicted flavoprotein YP_005404274.1 COG2091 Phosphopantetheinyl transferase YP_005404275.1 COG0840 Methyl-accepting chemotaxis protein YP_005404276.1 COG0583 Transcriptional regulator YP_005404277.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005404278.1 COG0486 Predicted GTPase YP_005404279.1 COG0706 Preprotein translocase subunit YidC YP_005404280.1 COG0759 Uncharacterized conserved protein YP_005404281.1 COG0594 RNase P protein component YP_005404282.1 COG0230 Ribosomal protein L34 YP_005418820.1 COG1649 Uncharacterized protein conserved in bacteria YP_005418821.1 COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid YP_005418822.1 COG0006 Xaa-Pro aminopeptidase YP_005418824.1 COG3141 Uncharacterized protein conserved in bacteria YP_005418825.1 COG0583 Transcriptional regulator YP_005418826.1 COG0388 Predicted amidohydrolase YP_005418827.1 COG4319 Ketosteroid isomerase homolog YP_005418828.1 COG0730 Predicted permeases YP_005418829.1 COG0583 Transcriptional regulator YP_005418830.1 COG1626 Neutral trehalase YP_005418831.1 COG0380 Trehalose-6-phosphate synthase YP_005418832.1 COG1877 Trehalose-6-phosphatase YP_005418833.1 COG0137 Argininosuccinate synthase YP_005418834.1 COG1283 Na+/phosphate symporter YP_005418835.1 COG0474 Cation transport ATPase YP_005418839.1 COG2211 Na+/melibiose symporter and related transporters YP_005418840.1 COG2990 Uncharacterized protein conserved in bacteria YP_005418841.1 COG0671 Membrane-associated phospholipid phosphatase YP_005418842.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005418845.1 COG0371 Glycerol dehydrogenase and related enzymes YP_005418846.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005418847.1 COG5276 Uncharacterized conserved protein YP_005418848.1 COG2045 Phosphosulfolactate phosphohydrolase and related enzymes YP_005418849.1 COG0477 Permeases of the major facilitator superfamily YP_005418850.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005418853.1 COG4457 Uncharacterized protein conserved in bacteria, putative virulence factor YP_005418854.1 COG4458 Uncharacterized protein conserved in bacteria, putative virulence factor YP_005418855.1 COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes YP_005418856.1 COG0693 Putative intracellular protease/amidase YP_005418857.1 COG1309 Transcriptional regulator YP_005418858.1 COG0443 Molecular chaperone YP_005418859.1 COG2214 DnaJ-class molecular chaperone YP_005418860.1 COG2214 DnaJ-class molecular chaperone YP_005418861.1 COG0366 Glycosidases YP_005418862.1 COG0477 Permeases of the major facilitator superfamily YP_005418863.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005418864.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005418865.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005418866.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005418867.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005418868.1 COG0845 Membrane-fusion protein YP_005418869.1 COG0841 Cation/multidrug efflux pump YP_005418870.1 COG1959 Predicted transcriptional regulator YP_005418871.1 COG3203 Outer membrane protein (porin) YP_005418872.1 COG0661 Predicted unusual protein kinase YP_005418876.1 COG0671 Membrane-associated phospholipid phosphatase YP_005418877.1 COG4763 Predicted membrane protein YP_005418878.1 COG3594 Fucose 4-O-acetylase and related acetyltransferases YP_005418893.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005418895.1 COG5525 Bacteriophage tail assembly protein YP_005418899.1 COG3772 Phage-related lysozyme (muraminidase) YP_005418904.1 COG4637 Predicted ATPase YP_005418911.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005418913.1 COG1396 Predicted transcriptional regulators YP_005418914.1 COG2932 Predicted transcriptional regulator YP_005418917.1 COG0582 Integrase YP_005418918.1 COG3203 Outer membrane protein (porin) YP_005418921.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005418922.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005418925.1 COG1262 Uncharacterized conserved protein YP_005418926.1 COG0582 Integrase YP_005418927.1 COG2202 FOG: PAS/PAC domain YP_005418928.1 COG0840 Methyl-accepting chemotaxis protein YP_005418929.1 COG3516 Uncharacterized protein conserved in bacteria YP_005418930.1 COG3517 Uncharacterized protein conserved in bacteria YP_005418931.1 COG3522 Uncharacterized protein conserved in bacteria YP_005418932.1 COG3455 Uncharacterized protein conserved in bacteria YP_005418933.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005418934.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005418935.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005418936.1 COG3501 Uncharacterized protein conserved in bacteria YP_005418942.1 COG4104 Uncharacterized conserved protein YP_005418944.1 COG3523 Uncharacterized protein conserved in bacteria YP_005418945.1 COG3519 Uncharacterized protein conserved in bacteria YP_005418946.1 COG3520 Uncharacterized protein conserved in bacteria YP_005418947.1 COG3521 Uncharacterized protein conserved in bacteria YP_005418951.1 COG3515 Uncharacterized protein conserved in bacteria YP_005418952.1 COG3518 Uncharacterized protein conserved in bacteria YP_005418954.1 COG3515 Uncharacterized protein conserved in bacteria YP_005418955.1 COG0133 Tryptophan synthase beta chain YP_005418956.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005418957.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005418959.1 COG1309 Transcriptional regulator YP_005418960.1 COG0477 Permeases of the major facilitator superfamily YP_005418961.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005418962.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005418963.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005418964.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005418965.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005418966.1 COG2771 DNA-binding HTH domain-containing proteins YP_005418967.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005418968.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005418969.1 COG2814 Arabinose efflux permease YP_005418970.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005418971.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005418973.1 COG2186 Transcriptional regulators YP_005418974.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005418975.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_005418976.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005418977.1 COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_005418978.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005418979.1 COG3254 Uncharacterized conserved protein YP_005418980.1 COG0738 Fucose permease YP_005418981.1 COG0477 Permeases of the major facilitator superfamily YP_005418982.1 COG0640 Predicted transcriptional regulators YP_005418983.1 COG4747 ACT domain-containing protein YP_005418984.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_005418986.1 COG0620 Methionine synthase II (cobalamin-independent) YP_005418987.1 COG2353 Uncharacterized conserved protein YP_005418988.1 COG2206 HD-GYP domain YP_005418989.1 COG3710 DNA-binding winged-HTH domains YP_005418992.1 COG0225 Peptide methionine sulfoxide reductase YP_005418993.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_005418994.1 COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases YP_005418995.1 COG2211 Na+/melibiose symporter and related transporters YP_005418996.1 COG1846 Transcriptional regulators YP_005418997.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005419000.1 COG1443 Isopentenyldiphosphate isomerase YP_005419001.1 COG0563 Adenylate kinase and related kinases YP_005419003.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_005419004.1 COG1733 Predicted transcriptional regulators YP_005419005.1 COG3224 Uncharacterized protein conserved in bacteria YP_005419006.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_005419007.1 COG0583 Transcriptional regulator YP_005419008.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005419009.1 COG1893 Ketopantoate reductase YP_005419010.1 COG3394 Uncharacterized protein conserved in bacteria YP_005419011.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_005419012.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005419013.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_005419014.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005419016.1 COG1609 Transcriptional regulators YP_005419018.1 COG2303 Choline dehydrogenase and related flavoproteins YP_005419019.1 COG2010 Cytochrome c, mono- and diheme variants YP_005419020.1 COG4460 Uncharacterized protein conserved in bacteria YP_005419021.1 COG0477 Permeases of the major facilitator superfamily YP_005419022.1 COG0583 Transcriptional regulator YP_005419023.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005419028.1 COG2200 FOG: EAL domain YP_005419029.1 COG0500 SAM-dependent methyltransferases YP_005419030.1 COG3237 Uncharacterized protein conserved in bacteria YP_005419032.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005419034.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005419036.1 COG4538 Uncharacterized conserved protein YP_005419037.1 COG1382 Prefoldin, chaperonin cofactor YP_005419038.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005419039.1 COG2814 Arabinose efflux permease YP_005419040.1 COG2076 Membrane transporters of cations and cationic drugs YP_005419042.1 COG0019 Diaminopimelate decarboxylase YP_005419044.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005419045.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005419046.1 COG0236 Acyl carrier protein YP_005419047.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005419048.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005419049.1 COG0346 Lactoylglutathione lyase and related lyases YP_005419050.1 COG1960 Acyl-CoA dehydrogenases YP_005419052.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005419053.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005419054.1 COG1960 Acyl-CoA dehydrogenases YP_005419056.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005419057.1 COG2124 Cytochrome P450 YP_005419058.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005419060.1 COG2091 Phosphopantetheinyl transferase YP_005419061.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_005419062.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005419063.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005419064.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005419065.1 COG0845 Membrane-fusion protein YP_005419066.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_005419067.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005419068.1 COG0534 Na+-driven multidrug efflux pump YP_005419069.1 COG1960 Acyl-CoA dehydrogenases YP_005419070.1 COG0236 Acyl carrier protein YP_005419071.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005419072.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005419073.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005419074.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005419075.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase YP_005419076.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase YP_005419077.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005419078.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005419079.1 COG0583 Transcriptional regulator YP_005419080.1 COG4993 Glucose dehydrogenase YP_005419081.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_005419082.1 COG1396 Predicted transcriptional regulators YP_005419083.1 COG2188 Transcriptional regulators YP_005419084.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005419085.1 COG1264 Phosphotransferase system IIB components YP_005419086.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_005419087.1 COG0583 Transcriptional regulator YP_005419088.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005419089.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005419090.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005419091.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005419092.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005419093.1 COG5527 Protein involved in initiation of plasmid replication YP_005419095.1 COG1192 ATPases involved in chromosome partitioning YP_005419096.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_005419097.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005419098.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_005419099.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_005419100.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_005419101.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_005419102.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005419103.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_005419104.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_005419105.1 COG2199 FOG: GGDEF domain YP_005419106.1 COG1802 Transcriptional regulators YP_005419107.1 COG0477 Permeases of the major facilitator superfamily YP_005419108.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005419109.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_005419110.1 COG3302 DMSO reductase anchor subunit YP_005419111.1 COG1145 Ferredoxin YP_005419113.1 COG3007 Uncharacterized paraquat-inducible protein B YP_005419114.1 COG2314 Predicted membrane protein YP_005419116.1 COG3037 Uncharacterized protein conserved in bacteria YP_005419117.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005419118.1 COG0583 Transcriptional regulator YP_005419119.1 COG2916 DNA-binding protein H-NS YP_005419120.1 COG3038 Cytochrome B561 YP_005419123.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005419124.1 COG1893 Ketopantoate reductase YP_005419125.1 COG3177 Uncharacterized conserved protein YP_005419126.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005419127.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005419128.1 COG1129 ABC-type sugar transport system, ATPase component YP_005419129.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005419130.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005419131.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005419132.1 COG1556 Uncharacterized conserved protein YP_005419134.1 COG3501 Uncharacterized protein conserved in bacteria YP_005419137.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005419138.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005419139.1 COG4993 Glucose dehydrogenase YP_005419140.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005419141.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005419142.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005419143.1 COG0346 Lactoylglutathione lyase and related lyases YP_005419144.1 COG3268 Uncharacterized conserved protein YP_005419145.1 COG0583 Transcriptional regulator YP_005419146.1 COG0546 Predicted phosphatases YP_005419148.1 COG3813 Uncharacterized protein conserved in bacteria YP_005419149.1 COG0346 Lactoylglutathione lyase and related lyases YP_005419150.1 COG2378 Predicted transcriptional regulator YP_005419151.1 COG0477 Permeases of the major facilitator superfamily YP_005419152.1 COG0583 Transcriptional regulator YP_005419153.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005419154.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005419155.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005419156.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005419157.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005419158.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005419159.1 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005419160.1 COG3520 Uncharacterized protein conserved in bacteria YP_005419161.1 COG3519 Uncharacterized protein conserved in bacteria YP_005419162.1 COG3521 Uncharacterized protein conserved in bacteria YP_005419164.1 COG4104 Uncharacterized conserved protein YP_005419166.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005419169.1 COG3501 Uncharacterized protein conserved in bacteria YP_005419170.1 COG1846 Transcriptional regulators YP_005419171.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005419172.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005419173.1 COG0477 Permeases of the major facilitator superfamily YP_005419174.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005419175.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005419176.1 COG1609 Transcriptional regulators YP_005419177.1 COG1264 Phosphotransferase system IIB components YP_005419178.1 COG4580 Maltoporin (phage lambda and maltose receptor) YP_005419179.1 COG0524 Sugar kinases, ribokinase family YP_005419180.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005419181.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_005419182.1 COG1538 Outer membrane protein YP_005419183.1 COG0841 Cation/multidrug efflux pump YP_005419184.1 COG0845 Membrane-fusion protein YP_005419185.1 COG1695 Predicted transcriptional regulators YP_005419186.1 COG3009 Uncharacterized protein conserved in bacteria YP_005419187.1 COG3008 Paraquat-inducible protein B YP_005419188.1 COG2995 Uncharacterized paraquat-inducible protein A YP_005419189.1 COG2995 Uncharacterized paraquat-inducible protein A YP_005419191.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005419192.1 COG1309 Transcriptional regulator YP_005419193.1 COG2375 Siderophore-interacting protein YP_005419194.1 COG1695 Predicted transcriptional regulators YP_005419195.1 COG0024 Methionine aminopeptidase YP_005419199.1 COG2041 Sulfite oxidase and related enzymes YP_005419200.1 COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) YP_005419201.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005419202.1 COG0642 Signal transduction histidine kinase YP_005419203.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005419204.1 COG0583 Transcriptional regulator YP_005419205.1 COG2076 Membrane transporters of cations and cationic drugs YP_005419206.1 COG1396 Predicted transcriptional regulators YP_005419207.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_005419208.1 COG0655 Multimeric flavodoxin WrbA YP_005419209.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_005419210.1 COG3721 Putative heme iron utilization protein YP_005419211.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005419214.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005419217.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005419218.1 COG2199 FOG: GGDEF domain YP_005419219.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_005419220.1 COG0535 Predicted Fe-S oxidoreductases YP_005419222.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_005419223.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005419225.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_005419226.1 COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid YP_005419228.1 COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) YP_005419229.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005419230.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005419231.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005419232.1 COG0840 Methyl-accepting chemotaxis protein YP_005419233.1 COG2367 Beta-lactamase class A YP_005419234.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_005419235.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_005419236.1 COG0668 Small-conductance mechanosensitive channel YP_005419237.1 COG3280 Maltooligosyl trehalose synthase YP_005419238.1 COG0296 1,4-alpha-glucan branching enzyme YP_005419240.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005419241.1 COG0625 Glutathione S-transferase YP_005419242.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005419243.1 COG0583 Transcriptional regulator YP_005419244.1 COG3275 Putative regulator of cell autolysis YP_005419245.1 COG3279 Response regulator of the LytR/AlgR family YP_005419246.1 COG0523 Putative GTPases (G3E family) YP_005419247.1 COG2879 Uncharacterized small protein YP_005419248.1 COG1966 Carbon starvation protein, predicted membrane protein YP_005419249.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005419250.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005419251.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_005419252.1 COG1073 Hydrolases of the alpha/beta superfamily YP_005419254.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_005419255.1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component YP_005419256.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_005419257.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_005419258.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_005419259.1 COG1802 Transcriptional regulators YP_005419260.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005419261.1 COG0345 Pyrroline-5-carboxylate reductase YP_005419262.1 COG0842 ABC-type multidrug transport system, permease component YP_005419263.1 COG0842 ABC-type multidrug transport system, permease component YP_005419264.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005419265.1 COG0845 Membrane-fusion protein YP_005419266.1 COG1309 Transcriptional regulator YP_005419268.1 COG1454 Alcohol dehydrogenase, class IV YP_005419269.1 COG0668 Small-conductance mechanosensitive channel YP_005419270.1 COG5485 Predicted ester cyclase YP_005419271.1 COG0583 Transcriptional regulator YP_005419272.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005419274.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005419275.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005419276.1 COG0583 Transcriptional regulator YP_005419277.1 COG1971 Predicted membrane protein YP_005419278.1 COG3516 Uncharacterized protein conserved in bacteria YP_005419279.1 COG3517 Uncharacterized protein conserved in bacteria YP_005419280.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_005419281.1 COG3518 Uncharacterized protein conserved in bacteria YP_005419282.1 COG3519 Uncharacterized protein conserved in bacteria YP_005419283.1 COG3520 Uncharacterized protein conserved in bacteria YP_005419284.1 COG3501 Uncharacterized protein conserved in bacteria YP_005419286.1 COG4104 Uncharacterized conserved protein YP_005419287.1 COG3515 Uncharacterized protein conserved in bacteria YP_005419289.1 COG3522 Uncharacterized protein conserved in bacteria YP_005419290.1 COG3455 Uncharacterized protein conserved in bacteria YP_005419291.1 COG3523 Uncharacterized protein conserved in bacteria YP_005419292.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005419293.1 COG3515 Uncharacterized protein conserved in bacteria YP_005419295.1 COG3158 K+ transporter YP_005419297.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005419298.1 COG0346 Lactoylglutathione lyase and related lyases YP_005419299.1 COG1940 Transcriptional regulator/sugar kinase YP_005419300.1 COG0477 Permeases of the major facilitator superfamily YP_005419301.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005419304.1 COG1321 Mn-dependent transcriptional regulator YP_005419305.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005419306.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005419307.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005419308.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005419310.1 COG0814 Amino acid permeases YP_005419311.1 COG1741 Pirin-related protein YP_005419312.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005419313.1 COG0477 Permeases of the major facilitator superfamily YP_005419314.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005419315.1 COG1309 Transcriptional regulator YP_005419316.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005419320.1 COG0281 Malic enzyme YP_005419321.1 COG0679 Predicted permeases YP_005419322.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain YP_005419323.1 COG0471 Di- and tricarboxylate transporters YP_005419324.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005419326.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_005419327.1 COG4565 Response regulator of citrate/malate metabolism YP_005419328.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_005419329.1 COG5455 Predicted integral membrane protein YP_005419330.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005419332.1 COG1737 Transcriptional regulators YP_005419333.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005419334.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005419335.1 COG3104 Dipeptide/tripeptide permease YP_005419336.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_005419337.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_005419338.1 COG0640 Predicted transcriptional regulators YP_006258957.1 COG0583 Transcriptional regulator YP_006258958.1 COG3547 Transposase and inactivated derivatives YP_006258959.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_006258960.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_006258962.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_006258964.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_006258965.1 COG0583 Transcriptional regulator YP_006258966.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_006258967.1 COG1359 Uncharacterized conserved protein YP_006258968.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_006258969.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_006258970.1 COG0346 Lactoylglutathione lyase and related lyases YP_006258973.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_006258974.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_006258975.1 COG3547 Transposase and inactivated derivatives YP_006258976.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_006258982.1 COG2801 Transposase and inactivated derivatives YP_006258983.1 COG2801 Transposase and inactivated derivatives YP_006258984.1 COG1348 Nitrogenase subunit NifH (ATPase) YP_006258985.1 COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains YP_006258986.1 COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains YP_006258988.1 COG0535 Predicted Fe-S oxidoreductases YP_006258989.1 COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains YP_006258990.1 COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains YP_006258991.1 COG0535 Predicted Fe-S oxidoreductases YP_006258992.1 COG0316 Uncharacterized conserved protein YP_006258993.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_006258994.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_006258995.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_006258998.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_006258999.1 COG2202 FOG: PAS/PAC domain YP_006259000.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains YP_006259001.1 COG0535 Predicted Fe-S oxidoreductases YP_006259003.1 COG3385 FOG: Transposase and inactivated derivatives YP_006259004.1 COG0716 Flavodoxins YP_006259005.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_006259007.1 COG2199 FOG: GGDEF domain YP_006259008.1 COG0477 Permeases of the major facilitator superfamily YP_006259009.1 COG4453 Uncharacterized protein conserved in bacteria YP_006259010.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_006259011.1 COG4974 Site-specific recombinase XerD YP_006259012.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_006259013.1 COG4115 Uncharacterized protein conserved in bacteria YP_006259015.1 COG4382 Mu-like prophage protein gp16 YP_006259016.1 COG0524 Sugar kinases, ribokinase family YP_006259018.1 COG1621 Beta-fructosidases (levanase/invertase) YP_006259019.1 COG0525 Valyl-tRNA synthetase YP_006259020.1 COG0477 Permeases of the major facilitator superfamily YP_006259021.1 COG1609 Transcriptional regulators YP_006259022.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_006259024.1 COG0693 Putative intracellular protease/amidase YP_006259025.1 COG0583 Transcriptional regulator YP_006271884.1 COG2200 FOG: EAL domain YP_006271887.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_006271891.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_006271892.1 COG3383 Uncharacterized anaerobic dehydrogenase YP_006271895.1 COG0250 Transcription antiterminator YP_006271900.1 COG3451 Type IV secretory pathway, VirB4 components YP_006271907.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_006271920.1 COG3505 Type IV secretory pathway, VirD4 components YP_006271921.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_006271922.1 COG1651 Protein-disulfide isomerase YP_006271924.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_006271929.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_006271931.1 COG2814 Arabinose efflux permease YP_006271932.1 COG0583 Transcriptional regulator