-- dump date 20140620_023241 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 402626000001 SEQ_END SEQ_END NC_010678.1 1302238 1302238 DR NC_010678.1; contig end 1302238..1302238 Ralstonia pickettii 12J 402626000002 SEQ_END SEQ_END NC_010682.1 3942557 3942557 DR NC_010682.1; contig end 3942557..3942557 Ralstonia pickettii 12J 402626000003 SEQ_END SEQ_END NC_010683.1 80934 80934 DR NC_010683.1; contig end 80934..80934 Ralstonia pickettii 12J YP_001892304.1 CDS prfC NC_010678.1 23 1618 R stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 complement(23..1618) Ralstonia pickettii 12J 6284993 YP_001892305.1 CDS Rpic_3762 NC_010678.1 1899 2207 D KEGG: rso:RS02222 hypothetical protein; hypothetical protein 1899..2207 Ralstonia pickettii 12J 6285356 YP_001892306.1 CDS Rpic_3763 NC_010678.1 2330 2632 D KEGG: pol:Bpro_3432 hypothetical protein; hypothetical protein 2330..2632 Ralstonia pickettii 12J 6285004 YP_001892307.1 CDS Rpic_3764 NC_010678.1 2647 3636 R PFAM: ribonuclease BN; KEGG: rso:RS02223 ribonuclease RNase BN (RBN) transmembrane protein; ribonuclease BN complement(2647..3636) Ralstonia pickettii 12J 6284989 YP_001892308.1 CDS Rpic_3765 NC_010678.1 3721 4026 R KEGG: rso:RS02224 hypothetical protein; hypothetical protein complement(3721..4026) Ralstonia pickettii 12J 6285923 YP_001892309.1 CDS Rpic_3766 NC_010678.1 4080 4247 R PFAM: protein of unknown function DUF1328; KEGG: rso:RS02225 probable transmembrane protein; hypothetical protein complement(4080..4247) Ralstonia pickettii 12J 6285554 YP_001892310.1 CDS Rpic_3767 NC_010678.1 4367 5773 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS02226 probable sigma-54 interacting response regulator transcription regulator protein; Fis family transcriptional regulator complement(4367..5773) Ralstonia pickettii 12J 6285794 YP_001892311.1 CDS Rpic_3768 NC_010678.1 6310 7407 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS02227 probable sigma-54 interacting transcription regulator protein; Fis family transcriptional regulator 6310..7407 Ralstonia pickettii 12J 6285925 YP_001892312.1 CDS Rpic_3769 NC_010678.1 7630 7950 R KEGG: rso:RS02229 hypothetical signal peptide protein; hypothetical protein complement(7630..7950) Ralstonia pickettii 12J 6285157 YP_001892313.1 CDS Rpic_3770 NC_010678.1 8263 9765 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 8263..9765 Ralstonia pickettii 12J 6285437 YP_001892314.1 CDS Rpic_3771 NC_010678.1 9819 10991 D PFAM: glycosyl transferase group 1; KEGG: eba:ebA6934 conserved hypothetical protein, predicted glycosyltransferase; group 1 glycosyl transferase 9819..10991 Ralstonia pickettii 12J 6285970 YP_001892315.1 CDS Rpic_3772 NC_010678.1 11010 11804 D KEGG: rso:RS02231 hypothetical protein; hypothetical protein 11010..11804 Ralstonia pickettii 12J 6285318 YP_001892316.1 CDS Rpic_3773 NC_010678.1 11811 12347 R PFAM: phosphoesterase PA-phosphatase related; KEGG: eba:ebA6940 conserved hypothetical protein, predicted phosphatidic acid-phosphatase related phosphoesterase family; PA-phosphatase like phosphoesterase complement(11811..12347) Ralstonia pickettii 12J 6284973 YP_001892317.1 CDS Rpic_3774 NC_010678.1 12325 13497 R PFAM: glycosyl transferase group 1; KEGG: eba:ebA6942 glycosyl transferase; group 1 glycosyl transferase complement(12325..13497) Ralstonia pickettii 12J 6285727 YP_001892318.1 CDS Rpic_3775 NC_010678.1 13506 13937 R KEGG: rso:RS02233 hypothetical protein; hypothetical protein complement(13506..13937) Ralstonia pickettii 12J 6285110 YP_001892319.1 CDS Rpic_3776 NC_010678.1 14139 15458 R PFAM: protein of unknown function UPF0118; KEGG: aav:Aave_2002 protein of unknown function UPF0118; hypothetical protein complement(14139..15458) Ralstonia pickettii 12J 6284861 YP_001892320.1 CDS Rpic_3777 NC_010678.1 15460 17844 R KEGG: rso:RS02235 probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(15460..17844) Ralstonia pickettii 12J 6284862 YP_001892321.1 CDS Rpic_3778 NC_010678.1 17929 18711 R KEGG: bch:Bcen2424_4033 hypothetical protein; hypothetical protein complement(17929..18711) Ralstonia pickettii 12J 6284863 YP_001892322.1 CDS Rpic_3779 NC_010678.1 19004 20287 D KEGG: rso:RS02236 proline-rich protein; hypothetical protein 19004..20287 Ralstonia pickettii 12J 6284864 YP_001892323.1 CDS Rpic_3780 NC_010678.1 20561 21865 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: rso:RS02237 probable transmembrane protein; xanthine/uracil/vitamin C permease complement(20561..21865) Ralstonia pickettii 12J 6284865 YP_001892324.1 CDS Rpic_3781 NC_010678.1 23271 24344 D PFAM: plasmid encoded RepA protein; KEGG: rso:RSp0001 probable RepA replicase protein; plasmid encoded RepA protein 23271..24344 Ralstonia pickettii 12J 6284866 YP_001892325.1 CDS Rpic_3782 NC_010678.1 24421 24624 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rso:RSp0002 probable cold shock-like transcription regulator protein; cold-shock protein complement(24421..24624) Ralstonia pickettii 12J 6284867 YP_001892326.1 CDS Rpic_3783 NC_010678.1 25030 25698 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rso:RSp0003 probable partition protein; Cobyrinic acid ac-diamide synthase 25030..25698 Ralstonia pickettii 12J 6284868 YP_001892327.1 CDS Rpic_3784 NC_010678.1 25695 26702 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: rso:RSp0004 partitioning protein; parB-like partition protein 25695..26702 Ralstonia pickettii 12J 6284869 YP_001892328.1 CDS Rpic_3785 NC_010678.1 27001 27837 D KEGG: rso:RS01977 hypothetical protein; hypothetical protein 27001..27837 Ralstonia pickettii 12J 6284870 YP_001892329.1 CDS Rpic_3786 NC_010678.1 28088 29041 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rso:RSp0006 probable UTP--glucose-1-phosphate uridylyltransferase UDP-glucose pyrophosphorylase protein; UTP-glucose-1-phosphate uridylyltransferase 28088..29041 Ralstonia pickettii 12J 6284872 YP_001892330.1 CDS Rpic_3787 NC_010678.1 29300 30646 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSp0007 alpha-ketoglutarate permease transmembrane protein; general substrate transporter 29300..30646 Ralstonia pickettii 12J 6284873 YP_001892331.1 CDS Rpic_3788 NC_010678.1 30651 32558 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSp0008 probable C4-dicarboxylate transport sensor kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase 30651..32558 Ralstonia pickettii 12J 6284874 YP_001892332.1 CDS Rpic_3789 NC_010678.1 32555 33913 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RSp0009 probable response regulator of the C4-dicarboxylate transport two-component regulatory system transcription regulator protein; Fis family transcriptional regulator 32555..33913 Ralstonia pickettii 12J 6284875 YP_001892333.1 CDS Rpic_3790 NC_010678.1 33910 34710 R KEGG: rso:RS01982 lipoprotein transmembrane; lipoprotein transmembrane complement(33910..34710) Ralstonia pickettii 12J 6284877 YP_001892334.1 CDS Rpic_3791 NC_010678.1 34823 35263 D KEGG: rso:RS01983 hypothetical signal peptide protein; hypothetical protein 34823..35263 Ralstonia pickettii 12J 6284878 YP_001892335.1 CDS Rpic_3792 NC_010678.1 35376 38057 D KEGG: rso:RS01984 probable transmembrane protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 35376..38057 Ralstonia pickettii 12J 6284879 YP_001892336.1 CDS Rpic_3793 NC_010678.1 38492 39652 D PFAM: Extracellular ligand-binding receptor; KEGG: rso:RS01985 probable amino acid-binding periplasmic (PBP) ABC transporter protein; extracellular ligand-binding receptor 38492..39652 Ralstonia pickettii 12J 6284880 YP_001892337.1 CDS Rpic_3794 NC_010678.1 39749 40630 D PFAM: inner-membrane translocator; KEGG: rso:RS01986 probable amino-acid transmembrane lipoprotein ABC transporter; inner-membrane translocator 39749..40630 Ralstonia pickettii 12J 6284881 YP_001892338.1 CDS Rpic_3795 NC_010678.1 40644 41552 D PFAM: inner-membrane translocator; KEGG: rso:RS01987 probable amino-acid transmembrane ABC transporter protein; inner-membrane translocator 40644..41552 Ralstonia pickettii 12J 6284884 YP_001892339.1 CDS Rpic_3796 NC_010678.1 41560 42357 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RS01988 probable amino-acid ATP-binding ABC transporter protein; ABC transporter 41560..42357 Ralstonia pickettii 12J 6284885 YP_001892340.1 CDS Rpic_3797 NC_010678.1 42354 43079 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RS01989 probable amino-acid ATP-binding ABC transporter protein; ABC transporter 42354..43079 Ralstonia pickettii 12J 6284886 YP_001892341.1 CDS Rpic_3798 NC_010678.1 43153 44049 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS01990 probable transcriptional regulator transcription regulator protein; LysR family transcriptional regulator complement(43153..44049) Ralstonia pickettii 12J 6284887 YP_001892342.1 CDS Rpic_3799 NC_010678.1 44225 45223 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_4057 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 44225..45223 Ralstonia pickettii 12J 6284888 YP_001892343.1 CDS Rpic_3800 NC_010678.1 45319 45636 D PFAM: YCII-related; KEGG: rso:RS01991 hypothetical protein; hypothetical protein 45319..45636 Ralstonia pickettii 12J 6284889 YP_001892344.1 CDS Rpic_3801 NC_010678.1 45689 47083 D PFAM: Chloride channel core; KEGG: rso:RS01992 voltage-gated ClC-type chloride channel ClcB; chloride channel protein 45689..47083 Ralstonia pickettii 12J 6284891 YP_001892345.1 CDS Rpic_3802 NC_010678.1 47353 49581 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: reu:Reut_A2876 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 47353..49581 Ralstonia pickettii 12J 6284892 YP_001892346.1 CDS Rpic_3803 NC_010678.1 49630 50316 D PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: reu:Reut_A2877 hydroxylase; hydroxylase 49630..50316 Ralstonia pickettii 12J 6284893 YP_001892347.1 CDS Rpic_3804 NC_010678.1 50377 50523 R KEGG: rso:RS01993 hypothetical protein; hypothetical protein complement(50377..50523) Ralstonia pickettii 12J 6284894 YP_001892348.1 CDS Rpic_3805 NC_010678.1 50648 53176 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: nmu:Nmul_A1613 pyruvate, water dikinase; pyruvate, water dikinase complement(50648..53176) Ralstonia pickettii 12J 6284895 YP_001892349.1 CDS Rpic_3806 NC_010678.1 53176 53805 R PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_3720 TetR family transcriptional regulator; TetR family transcriptional regulator complement(53176..53805) Ralstonia pickettii 12J 6284896 YP_001892350.1 CDS Rpic_3807 NC_010678.1 53925 54878 D KEGG: reh:H16_B2515 prolyl aminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 53925..54878 Ralstonia pickettii 12J 6284898 YP_001892351.1 CDS Rpic_3808 NC_010678.1 54933 57359 D KEGG: bte:BTH_II0144 sensor protein EvgS precursor; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; SMART: extracellular solute-binding protein family 3; multi-sensor hybrid histidine kinase 54933..57359 Ralstonia pickettii 12J 6284899 YP_001892352.1 CDS Rpic_3809 NC_010678.1 57801 58388 D PFAM: Fimbrial protein; KEGG: pfl:PFL_3922 type I pilus biogenesis protein; Fimbrial protein 57801..58388 Ralstonia pickettii 12J 6284900 YP_001892353.1 CDS Rpic_3810 NC_010678.1 58473 59216 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: pfo:Pfl_3043 pili assembly chaperone; Pili assembly chaperone, N-terminal 58473..59216 Ralstonia pickettii 12J 6284901 YP_001892354.1 CDS Rpic_3811 NC_010678.1 59300 61927 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pfo:Pfl_3044 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 59300..61927 Ralstonia pickettii 12J 6284902 YP_001892355.1 CDS Rpic_3814 NC_010678.1 63686 63982 D PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_6073 transposase IS3/IS911; transposase IS3/IS911 family protein 63686..63982 Ralstonia pickettii 12J 6285282 YP_001892356.1 CDS Rpic_3815 NC_010678.1 63979 64872 D PFAM: Integrase catalytic region; KEGG: rme:Rmet_6074 integrase, catalytic region; integrase catalytic subunit 63979..64872 Ralstonia pickettii 12J 6284904 YP_001892357.1 CDS Rpic_3816 NC_010678.1 64884 65552 D PFAM: Fimbrial protein; KEGG: rme:Rmet_4253 fimbrial protein; Fimbrial protein 64884..65552 Ralstonia pickettii 12J 6284906 YP_001892358.1 CDS Rpic_3817 NC_010678.1 66041 66868 D PFAM: penicillin-binding protein transpeptidase; KEGG: rso:RS02005 probable oxacillin hydrolase (class-D beta-lactamase) signal peptide protein; beta-lactamase 66041..66868 Ralstonia pickettii 12J 6285870 YP_001892359.1 CDS Rpic_3818 NC_010678.1 66878 67603 R PFAM: regulatory protein ArsR; KEGG: bpt:Bpet1842 transcriptional regulator, ArsR-family; ArsR family transcriptional regulator complement(66878..67603) Ralstonia pickettii 12J 6284910 YP_001892360.1 CDS Rpic_3819 NC_010678.1 67725 69101 D PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5026 major facilitator superfamily MFS_1; major facilitator superfamily protein 67725..69101 Ralstonia pickettii 12J 6284911 YP_001892361.1 CDS Rpic_3820 NC_010678.1 69918 70097 D KEGG: azc:AZC_1023 hypothetical protein; hypothetical protein 69918..70097 Ralstonia pickettii 12J 6284912 YP_001892362.1 CDS Rpic_3821 NC_010678.1 70097 71605 D PFAM: Na+/solute symporter; KEGG: azc:AZC_1022 monocarboxylic acid permease; Na+/solute symporter 70097..71605 Ralstonia pickettii 12J 6284913 YP_001892363.1 CDS Rpic_3822 NC_010678.1 71890 72288 D KEGG: reu:Reut_B5732 hypothetical protein; hypothetical protein 71890..72288 Ralstonia pickettii 12J 6284914 YP_001892364.1 CDS Rpic_3823 NC_010678.1 72406 72690 D KEGG: rso:RSc2698 hypothetical protein; hypothetical protein 72406..72690 Ralstonia pickettii 12J 6284915 YP_001892365.1 CDS Rpic_3824 NC_010678.1 72842 73264 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C6566 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(72842..73264) Ralstonia pickettii 12J 6284916 YP_001892366.1 CDS Rpic_3825 NC_010678.1 73316 74386 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bmu:Bmul_5709 arsenical-resistance protein; arsenical-resistance protein complement(73316..74386) Ralstonia pickettii 12J 6284917 YP_001892367.1 CDS Rpic_3826 NC_010678.1 74460 74963 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rso:RSp1128 arsenate reductase (arsenical PUMP modifier) protein; protein tyrosine phosphatase complement(74460..74963) Ralstonia pickettii 12J 6284918 YP_001892368.1 CDS Rpic_3827 NC_010678.1 74974 75456 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_A2179 lactoylglutathione lyase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(74974..75456) Ralstonia pickettii 12J 6284919 YP_001892369.1 CDS Rpic_3828 NC_010678.1 75468 75722 R SMART: regulatory protein ArsR; KEGG: rso:RSp1129 arsenical resistance operon repressor transcription regulator protein; ArsR family transcriptional regulator complement(75468..75722) Ralstonia pickettii 12J 6284921 YP_001892370.1 CDS rdgC NC_010678.1 76071 76991 D Required for efficient pilin antigenic variation; recombination associated protein 76071..76991 Ralstonia pickettii 12J 6284923 YP_001892371.1 CDS Rpic_3830 NC_010678.1 77049 77726 R KEGG: rme:Rmet_4026 periplasmic ligand-binding sensor protein; periplasmic ligand-binding sensor protein complement(77049..77726) Ralstonia pickettii 12J 6284926 YP_001892372.1 CDS Rpic_3831 NC_010678.1 77993 80371 D catalyzes the conversion of salicylyl-CoA to gentisyl-CoA; salicylyl-CoA 5-hydroxylase 77993..80371 Ralstonia pickettii 12J 6284927 YP_001892373.1 CDS Rpic_3832 NC_010678.1 80373 81155 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RS02008 probable oxidoreductase protein; short-chain dehydrogenase/reductase SDR 80373..81155 Ralstonia pickettii 12J 6285980 YP_001892374.1 CDS Rpic_3833 NC_010678.1 81152 81736 D PFAM: regulatory protein MarR; KEGG: rso:RS02009 transcription regulator protein; MarR family transcriptional regulator 81152..81736 Ralstonia pickettii 12J 6284928 YP_001892375.1 CDS Rpic_3834 NC_010678.1 81754 82614 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 81754..82614 Ralstonia pickettii 12J 6284929 YP_001892376.1 CDS Rpic_3835 NC_010678.1 82616 83791 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS02011 probable acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase 82616..83791 Ralstonia pickettii 12J 6284930 YP_001892377.1 CDS Rpic_3836 NC_010678.1 83828 85444 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS02012 probable acetyl-coenzyme A synthetase (acetate--CoA ligase) protein; AMP-dependent synthetase and ligase 83828..85444 Ralstonia pickettii 12J 6284931 YP_001892378.1 CDS Rpic_3837 NC_010678.1 85441 85872 D KEGG: rso:RS02013 4-hydroxybenzoyl-CoA thioesterase protein; 4-hydroxybenzoyl-CoA thioesterase 85441..85872 Ralstonia pickettii 12J 6284932 YP_001892379.1 CDS Rpic_3838 NC_010678.1 85886 86278 D PFAM: Endoribonuclease L-PSP; KEGG: rso:RS02014 hypothetical protein; endoribonuclease L-PSP 85886..86278 Ralstonia pickettii 12J 6284933 YP_001892380.1 CDS Rpic_3839 NC_010678.1 86584 87660 R SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_1732 AraC family transcriptional regulator; AraC family transcriptional regulator complement(86584..87660) Ralstonia pickettii 12J 6284935 YP_001892381.1 CDS Rpic_3840 NC_010678.1 87800 88195 D PFAM: Carboxymuconolactone decarboxylase; KEGG: reu:Reut_B4714 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 87800..88195 Ralstonia pickettii 12J 6284936 YP_001892382.1 CDS Rpic_3841 NC_010678.1 88231 89280 D PFAM: protein of unknown function DUF849; KEGG: reu:Reut_B4715 protein of unknown function DUF849, prokaryotic; hypothetical protein 88231..89280 Ralstonia pickettii 12J 6284937 YP_001892383.1 CDS Rpic_3842 NC_010678.1 89396 90217 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A3610 dehydrogenase; short-chain dehydrogenase/reductase SDR 89396..90217 Ralstonia pickettii 12J 6284938 YP_001892384.1 CDS Rpic_3843 NC_010678.1 90335 91618 D PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4716 major facilitator superfamily MFS_1; major facilitator superfamily protein 90335..91618 Ralstonia pickettii 12J 6284939 YP_001892385.1 CDS Rpic_3844 NC_010678.1 92176 93480 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSp0075 alpha-ketoglutarate permease transmembrane protein; metabolite/H+ symporter, major facilitator superfamily (MFS) complement(92176..93480) Ralstonia pickettii 12J 6284941 YP_001892386.1 CDS Rpic_3845 NC_010678.1 93664 94884 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS05543 probable transmembrane protein; major facilitator superfamily protein complement(93664..94884) Ralstonia pickettii 12J 6284943 YP_001892387.1 CDS Rpic_3846 NC_010678.1 94984 95820 R PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: rso:RS05542 DNA-binding transcriptional regulatory transcription regulator protein; GntR family transcriptional regulator complement(94984..95820) Ralstonia pickettii 12J 6284944 YP_001892388.1 CDS Rpic_3847 NC_010678.1 95985 96536 R PFAM: helix-turn-helix HxlR type; KEGG: rso:RS05541 hypothetical protein; HxlR family transcriptional regulator complement(95985..96536) Ralstonia pickettii 12J 6284947 YP_001892389.1 CDS Rpic_3848 NC_010678.1 96670 97248 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS05540 hypothetical protein; N-acetyltransferase GCN5 96670..97248 Ralstonia pickettii 12J 6284948 YP_001892390.1 CDS Rpic_3849 NC_010678.1 97487 97921 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B2073 glyoxalase/bleomycin resistanceprotein/dioxygenase superfamily protein; Glyoxalase/bleomycin resistance protein/dioxygenase 97487..97921 Ralstonia pickettii 12J 6284949 YP_001892391.1 CDS Rpic_3850 NC_010678.1 97972 98844 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B4146 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 97972..98844 Ralstonia pickettii 12J 6284950 YP_001892392.1 CDS Rpic_3851 NC_010678.1 98945 99730 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSp0106 molybdate-binding periplasmic signal peptide protein; molybdenum ABC transporter periplasmic molybdate-binding protein 98945..99730 Ralstonia pickettii 12J 6284951 YP_001892393.1 CDS Rpic_3852 NC_010678.1 99735 101033 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS03015 transport transmembrane protein; major facilitator superfamily protein complement(99735..101033) Ralstonia pickettii 12J 6284952 YP_001892394.1 CDS Rpic_3853 NC_010678.1 101195 101836 D PFAM: regulatory protein TetR; KEGG: rso:RS03014 transcription regulator protein; TetR family transcriptional regulator 101195..101836 Ralstonia pickettii 12J 6284953 YP_001892395.1 CDS Rpic_3854 NC_010678.1 101968 102939 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS03013 hypothetical protein; ATPase AAA 101968..102939 Ralstonia pickettii 12J 6284956 YP_001892396.1 CDS Rpic_3855 NC_010678.1 102952 104025 D PFAM: protein of unknown function DUF58; KEGG: rso:RS03012 hypothetical protein; hypothetical protein 102952..104025 Ralstonia pickettii 12J 6284957 YP_001892397.1 CDS Rpic_3856 NC_010678.1 104022 106046 D PFAM: transglutaminase domain protein; KEGG: rso:RS03011 hypothetical protein; transglutaminase domain-containing protein 104022..106046 Ralstonia pickettii 12J 6284959 YP_001892398.1 CDS Rpic_3857 NC_010678.1 106559 107629 D KEGG: rso:RS03006 lipoprotein; lipoprotein 106559..107629 Ralstonia pickettii 12J 6284960 YP_001892399.1 CDS Rpic_3858 NC_010678.1 107724 108911 R TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: rso:RS03003 hypothetical protein; AcnD-accessory protein PrpF complement(107724..108911) Ralstonia pickettii 12J 6284961 YP_001892400.1 CDS Rpic_3859 NC_010678.1 108908 111505 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(108908..111505) Ralstonia pickettii 12J 6284962 YP_001892401.1 CDS Rpic_3860 NC_010678.1 111821 112990 R catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase complement(111821..112990) Ralstonia pickettii 12J 6284963 YP_001892402.1 CDS prpB NC_010678.1 113027 113923 R catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase complement(113027..113923) Ralstonia pickettii 12J 6284964 YP_001892403.1 CDS Rpic_3862 NC_010678.1 114117 116063 D KEGG: rso:RSp0123 propionate catabolism operon regulatory transcription regulator protein; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase; Fis family proprionate catabolism activator 114117..116063 Ralstonia pickettii 12J 6284965 YP_001892404.1 CDS Rpic_3863 NC_010678.1 116177 116872 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: reu:Reut_B4062 metal-dependent phosphohydrolase, HD subdomain; metal dependent phosphohydrolase 116177..116872 Ralstonia pickettii 12J 6284966 YP_001892405.1 CDS Rpic_3864 NC_010678.1 117113 118459 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_0005 diguanylate cyclase; diguanylate cyclase 117113..118459 Ralstonia pickettii 12J 6284967 YP_001892406.1 CDS Rpic_3865 NC_010678.1 118482 119051 R PFAM: isochorismatase hydrolase; KEGG: reu:Reut_B4618 isochorismatase hydrolase; isochorismatase hydrolase complement(118482..119051) Ralstonia pickettii 12J 6284968 YP_001892407.1 CDS Rpic_3866 NC_010678.1 119260 120567 D PFAM: Chloride channel core; KEGG: bur:Bcep18194_A4091 Cl-channel, voltage gated; chloride channel protein 119260..120567 Ralstonia pickettii 12J 6284969 YP_001892408.1 CDS Rpic_3867 NC_010678.1 120619 121098 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: reu:Reut_B4637 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(120619..121098) Ralstonia pickettii 12J 6284970 YP_001892409.1 CDS Rpic_3869 NC_010678.1 121558 122412 R KEGG: rso:RS02998 lipoprotein transmembrane; lipoprotein transmembrane complement(121558..122412) Ralstonia pickettii 12J 6285429 YP_001892410.1 CDS Rpic_3871 NC_010678.1 123313 124284 D PFAM: restriction endonuclease; DNA topoisomerase type IA zn finger domain protein; KEGG: reu:Reut_A0538 restriction endonuclease; DNA topoisomerase type IA zn finger domain-containing protein 123313..124284 Ralstonia pickettii 12J 6285875 YP_001892411.1 CDS Rpic_3872 NC_010678.1 124391 125287 D PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ses:SARI_00228 hypothetical protein; DEAD/DEAH box helicase 124391..125287 Ralstonia pickettii 12J 6284980 YP_001892412.1 CDS Rpic_3873 NC_010678.1 125450 125953 D hypothetical protein 125450..125953 Ralstonia pickettii 12J 6284984 YP_001892413.1 CDS Rpic_3874 NC_010678.1 126085 127125 R KEGG: hch:HCH_06818 hypothetical protein; hypothetical protein complement(126085..127125) Ralstonia pickettii 12J 6284988 YP_001892414.1 CDS Rpic_3875 NC_010678.1 127550 127828 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 127550..127828 Ralstonia pickettii 12J 6284996 YP_001892415.1 CDS Rpic_3878 NC_010678.1 128552 129622 R KEGG: rso:RS02986 probable transmembrane protein; hypothetical protein complement(128552..129622) Ralstonia pickettii 12J 6285886 YP_001892416.1 CDS Rpic_3879 NC_010678.1 129908 132079 D TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: EAL domain protein; phosphotransferase system EIIC; KEGG: dsy:DSY1020 hypothetical protein; PTS system lactose/cellobiose family transporter subunit IIC 129908..132079 Ralstonia pickettii 12J 6285000 YP_001892417.1 CDS Rpic_3880 NC_010678.1 132095 132694 R KEGG: afm:AFUA_6G06670 conserved hypothetical protein; hypothetical protein complement(132095..132694) Ralstonia pickettii 12J 6285002 YP_001892418.1 CDS Rpic_3881 NC_010678.1 133388 133783 D TIGRFAM: addiction module antidote protein; KEGG: pen:PSEEN3939 hypothetical protein; transcriptional regulator 133388..133783 Ralstonia pickettii 12J 6285005 YP_001892419.1 CDS Rpic_3882 NC_010678.1 133925 134842 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_C6931 protein of unknown function DUF6, transmembrane; hypothetical protein 133925..134842 Ralstonia pickettii 12J 6285009 YP_001892420.1 CDS Rpic_3883 NC_010678.1 134874 135800 R KEGG: rso:RS02988 probable transmembrane protein; hypothetical protein complement(134874..135800) Ralstonia pickettii 12J 6285010 YP_001892421.1 CDS Rpic_3884 NC_010678.1 136065 136883 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 136065..136883 Ralstonia pickettii 12J 6285012 YP_001892422.1 CDS Rpic_3885 NC_010678.1 136993 137907 R PFAM: alpha/beta hydrolase fold; KEGG: bch:Bcen2424_4182 alpha/beta hydrolase fold; alpha/beta hydrolase complement(136993..137907) Ralstonia pickettii 12J 6285013 YP_001892423.1 CDS Rpic_3886 NC_010678.1 138017 138508 D PFAM: helix-turn-helix HxlR type; KEGG: bch:Bcen2424_4183 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 138017..138508 Ralstonia pickettii 12J 6285014 YP_001892424.1 CDS Rpic_3888 NC_010678.1 138768 138926 R hypothetical protein complement(138768..138926) Ralstonia pickettii 12J 6285490 YP_001892425.1 CDS Rpic_3889 NC_010678.1 139069 140004 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_C6950 AraC family transcriptional regulator; AraC family transcriptional regulator complement(139069..140004) Ralstonia pickettii 12J 6285016 YP_001892426.1 CDS Rpic_3890 NC_010678.1 140105 140791 D PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_C6949 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 140105..140791 Ralstonia pickettii 12J 6285017 YP_001892427.1 CDS Rpic_3891 NC_010678.1 140827 141666 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 140827..141666 Ralstonia pickettii 12J 6285019 YP_001892428.1 CDS Rpic_3892 NC_010678.1 141672 142127 R KEGG: eca:ECA0765 hypothetical protein; hypothetical protein complement(141672..142127) Ralstonia pickettii 12J 6285021 YP_001892429.1 CDS Rpic_3894 NC_010678.1 142862 143722 D KEGG: rme:Rmet_4636 hypothetical protein; hypothetical protein 142862..143722 Ralstonia pickettii 12J 6285896 YP_001892430.1 CDS Rpic_3895 NC_010678.1 143739 144248 R PFAM: protein of unknown function DUF1697; KEGG: bja:bll4334 hypothetical protein; hypothetical protein complement(143739..144248) Ralstonia pickettii 12J 6285023 YP_001892431.1 CDS Rpic_3896 NC_010678.1 144448 144876 D KEGG: rso:RSc3150 transmembrane protein; hypothetical protein 144448..144876 Ralstonia pickettii 12J 6285027 YP_001892432.1 CDS Rpic_3897 NC_010678.1 145064 146443 D Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 145064..146443 Ralstonia pickettii 12J 6285028 YP_001892433.1 CDS Rpic_3898 NC_010678.1 146521 147603 R PFAM: sodium/calcium exchanger membrane region; KEGG: reu:Reut_B4399 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region complement(146521..147603) Ralstonia pickettii 12J 6285031 YP_001892434.1 CDS Rpic_3899 NC_010678.1 147727 148581 R KEGG: rso:RS01997 hypothetical signal peptide protein; hypothetical protein complement(147727..148581) Ralstonia pickettii 12J 6285033 YP_001892435.1 CDS Rpic_3900 NC_010678.1 149036 149491 D hypothetical protein 149036..149491 Ralstonia pickettii 12J 6285036 YP_001892436.1 CDS Rpic_3902 NC_010678.1 149713 150606 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3766 LysR family transcriptional regulator; LysR family transcrptional regulator complement(149713..150606) Ralstonia pickettii 12J 6285299 YP_001892437.1 CDS Rpic_3903 NC_010678.1 150693 151469 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_2460 ribosyldihydronicotinamide dehydrogenase (quinone); ribosyldihydronicotinamide dehydrogenase 150693..151469 Ralstonia pickettii 12J 6285039 YP_001892438.1 CDS Rpic_3904 NC_010678.1 151579 152361 D PFAM: protein of unknown function DUF81; KEGG: rso:RS04702 probable transmembrane protein; hypothetical protein 151579..152361 Ralstonia pickettii 12J 6285044 YP_001892439.1 CDS Rpic_3905 NC_010678.1 152394 152789 D PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_5410 carboxymuconolactone decarboxylase; Carboxymuconolactone decarboxylase 152394..152789 Ralstonia pickettii 12J 6285045 YP_001892440.1 CDS Rpic_3906 NC_010678.1 152811 153029 D hypothetical protein 152811..153029 Ralstonia pickettii 12J 6285046 YP_001892441.1 CDS Rpic_3907 NC_010678.1 153042 153851 D PFAM: alpha/beta hydrolase fold; KEGG: rle:RL1292 arylesterase; alpha/beta hydrolase 153042..153851 Ralstonia pickettii 12J 6285049 YP_001892442.1 CDS Rpic_3908 NC_010678.1 153991 154494 R PFAM: thioesterase superfamily protein; KEGG: rso:RS05225 probable acyl-CoA thioester hydrolase-related protein; thioesterase superfamily protein complement(153991..154494) Ralstonia pickettii 12J 6285052 YP_001892443.1 CDS Rpic_3909 NC_010678.1 154540 155064 D KEGG: har:HEAR1579 hypothetical protein; signal peptide; hypothetical protein 154540..155064 Ralstonia pickettii 12J 6285053 YP_001892444.1 CDS Rpic_3910 NC_010678.1 155161 155502 D KEGG: bmu:Bmul_6293 hypothetical protein; hypothetical protein 155161..155502 Ralstonia pickettii 12J 6285056 YP_001892445.1 CDS Rpic_3911 NC_010678.1 155512 156924 D PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_3978 outer membrane efflux protein; outer membrane efflux protein 155512..156924 Ralstonia pickettii 12J 6285057 YP_001892446.1 CDS Rpic_3912 NC_010678.1 156927 158225 D PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bpd:BURPS668_A0714 multicopper oxidase family protein; multicopper oxidase type 3 156927..158225 Ralstonia pickettii 12J 6285060 YP_001892447.1 CDS Rpic_3913 NC_010678.1 158267 158755 D PFAM: blue (type 1) copper domain protein; KEGG: pna:Pnap_1260 blue (type 1) copper domain protein; blue (type 1) copper domain-containing protein 158267..158755 Ralstonia pickettii 12J 6285062 YP_001892448.1 CDS Rpic_3914 NC_010678.1 158791 159117 D KEGG: bmu:Bmul_6290 hypothetical protein; hypothetical protein 158791..159117 Ralstonia pickettii 12J 6285068 YP_001892449.1 CDS Rpic_3915 NC_010678.1 159508 160515 D SMART: lipopolysaccharide-modifying protein; KEGG: ftw:FTW_1815 lipopolysaccharide core biosynthesis protein; lipopolysaccharide-modifying protein 159508..160515 Ralstonia pickettii 12J 6285071 YP_001892450.1 CDS Rpic_3916 NC_010678.1 160642 161433 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: rso:RS05217 probable hydroxylase protein; Phytanoyl-CoA dioxygenase 160642..161433 Ralstonia pickettii 12J 6285074 YP_001892451.1 CDS Rpic_3917 NC_010678.1 161531 161752 D KEGG: rso:RS05216 hypothetical protein; hypothetical protein 161531..161752 Ralstonia pickettii 12J 6285079 YP_001892452.1 CDS Rpic_3918 NC_010678.1 161976 162416 D KEGG: rso:RS05215 hypothetical protein; hypothetical protein 161976..162416 Ralstonia pickettii 12J 6285081 YP_001892453.1 CDS Rpic_3919 NC_010678.1 162436 163962 D PFAM: Carotenoid oxygenase; KEGG: rso:RS05214 probable dioxygenase signal peptide protein; Carotenoid oxygenase 162436..163962 Ralstonia pickettii 12J 6285086 YP_001892454.1 CDS Rpic_3920 NC_010678.1 163975 165468 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dac:Daci_1258 peptidase dimerisation domain protein; peptidase dimerisation domain-containing protein complement(163975..165468) Ralstonia pickettii 12J 6285089 YP_001892455.1 CDS Rpic_3921 NC_010678.1 165677 166594 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2306 transcriptional regulator, LysR-family; LysR family transcriptional regulator 165677..166594 Ralstonia pickettii 12J 6285096 YP_001892456.1 CDS Rpic_3922 NC_010678.1 166611 168092 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(166611..168092) Ralstonia pickettii 12J 6285101 YP_001892457.1 CDS Rpic_3923 NC_010678.1 168140 168913 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B2488 ABC-type transporter, permease component; polar amino acid ABC transporter inner membrane subunit complement(168140..168913) Ralstonia pickettii 12J 6285103 YP_001892458.1 CDS Rpic_3924 NC_010678.1 168910 169602 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B2489 ABC-type transporter, permease component; polar amino acid ABC transporter inner membrane subunit complement(168910..169602) Ralstonia pickettii 12J 6285104 YP_001892459.1 CDS Rpic_3925 NC_010678.1 169674 170561 R PFAM: extracellular solute-binding protein family 3; KEGG: reh:H16_B2490 ABC-type transporter, periplasmic component: PAAT family; family 3 extracellular solute-binding protein complement(169674..170561) Ralstonia pickettii 12J 6285105 YP_001892460.1 CDS Rpic_3928 NC_010678.1 172660 173166 D KEGG: reu:Reut_B3507 hypothetical protein; hypothetical protein 172660..173166 Ralstonia pickettii 12J 6285107 YP_001892461.1 CDS Rpic_3929 NC_010678.1 173186 174571 R PFAM: ATP-binding region ATPase domain protein; KEGG: rso:RS05203 probable two-component transmembrane sensor histidine kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase complement(173186..174571) Ralstonia pickettii 12J 6285109 YP_001892462.1 CDS Rpic_3930 NC_010678.1 174797 175549 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bmu:Bmul_0867 methyltransferase type 11; type 11 methyltransferase complement(174797..175549) Ralstonia pickettii 12J 6285112 YP_001892463.1 CDS Rpic_3931 NC_010678.1 175668 176588 R PFAM: amidohydrolase 2; KEGG: rso:RS05190 probable hydrolase transmembrane protein; amidohydrolase 2 complement(175668..176588) Ralstonia pickettii 12J 6285113 YP_001892464.1 CDS Rpic_3932 NC_010678.1 176644 177891 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RS05189 probable metabolite transport transmembrane protein; major facilitator superfamily protein complement(176644..177891) Ralstonia pickettii 12J 6285114 YP_001892465.1 CDS Rpic_3933 NC_010678.1 178027 180849 R KEGG: rso:RS05188 maltooligosyl trehalose synthase transmembrane protein; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose synthase complement(178027..180849) Ralstonia pickettii 12J 6285115 YP_001892466.1 CDS Rpic_3934 NC_010678.1 180846 183128 R KEGG: rso:RS05187 4-alpha-glucanotransferase (amylomaltase) protein; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase complement(180846..183128) Ralstonia pickettii 12J 6285116 YP_001892467.1 CDS Rpic_3935 NC_010678.1 183167 185008 R KEGG: rso:RS05186 maltooligosyl trehalose trehalohydrolase protein; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase complement(183167..185008) Ralstonia pickettii 12J 6285119 YP_001892468.1 CDS Rpic_3936 NC_010678.1 185005 187305 R KEGG: rso:RSp0238 probable glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(185005..187305) Ralstonia pickettii 12J 6285129 YP_001892469.1 CDS Rpic_3937 NC_010678.1 187897 190203 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(187897..190203) Ralstonia pickettii 12J 6285136 YP_001892470.1 CDS Rpic_3938 NC_010678.1 190200 193694 R KEGG: rso:RS05183 hypothetical protein; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose synthase complement(190200..193694) Ralstonia pickettii 12J 6285137 YP_001892471.1 CDS Rpic_3939 NC_010678.1 193691 197281 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rso:RS05182 alpha-amylase-related protein; alpha amylase complement(193691..197281) Ralstonia pickettii 12J 6285139 YP_001892472.1 CDS glgA NC_010678.1 197313 198944 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(197313..198944) Ralstonia pickettii 12J 6285140 YP_001892473.1 CDS Rpic_3941 NC_010678.1 199347 199910 D KEGG: rso:RSp0245 probable alkyl hydroperoxide reductase (subunit C) oxidoreductase protein; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; peroxiredoxin 199347..199910 Ralstonia pickettii 12J 6285142 YP_001892474.1 CDS Rpic_3942 NC_010678.1 200036 201610 D TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSp0246 probable alkyl hydroperoxide reductase (subunit F) oxidoreductase protein; alkyl hydroperoxide reductase 200036..201610 Ralstonia pickettii 12J 6285143 YP_001892475.1 CDS Rpic_3943 NC_010678.1 201688 202575 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_2742 probable transcriptional regulator; LysR family transcriptional regulator complement(201688..202575) Ralstonia pickettii 12J 6285144 YP_001892476.1 CDS Rpic_3944 NC_010678.1 203210 203665 D PFAM: ferric-uptake regulator; KEGG: rso:RSp0247 probable ferric uptake transcriptional (FUR)-related transcription regulator protein; ferric uptake regulator family protein 203210..203665 Ralstonia pickettii 12J 6285148 YP_001892477.1 CDS Rpic_3945 NC_010678.1 203762 204013 D KEGG: rso:RS03718 hypothetical protein; hypothetical protein 203762..204013 Ralstonia pickettii 12J 6285151 YP_001892478.1 CDS Rpic_3946 NC_010678.1 204023 204328 R KEGG: rso:RS03717 hypothetical protein; hypothetical protein complement(204023..204328) Ralstonia pickettii 12J 6285164 YP_001892479.1 CDS Rpic_3947 NC_010678.1 204435 204755 R KEGG: rso:RS03716 transmembrane protein; hypothetical protein complement(204435..204755) Ralstonia pickettii 12J 6285172 YP_001892480.1 CDS Rpic_3948 NC_010678.1 204752 206617 R TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rso:RSp0251 probable ferrous iron transport B transmembrane protein; ferrous iron transport protein B complement(204752..206617) Ralstonia pickettii 12J 6285174 YP_001892481.1 CDS Rpic_3949 NC_010678.1 206664 206972 R PFAM: FeoA family protein; KEGG: rso:RS03714 hypothetical protein; FeoA family protein complement(206664..206972) Ralstonia pickettii 12J 6285175 YP_001892482.1 CDS Rpic_3950 NC_010678.1 207660 211211 D KEGG: rso:RS03712 probable transmembrane protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 207660..211211 Ralstonia pickettii 12J 6285176 YP_001892483.1 CDS Rpic_3951 NC_010678.1 211233 212822 R KEGG: rso:RS03711 probable methyl-accepting chemotaxis transducer transmembrane protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(211233..212822) Ralstonia pickettii 12J 6285178 YP_001892484.1 CDS Rpic_3952 NC_010678.1 213039 213290 D KEGG: rso:RS03710 hypothetical protein; hypothetical protein 213039..213290 Ralstonia pickettii 12J 6285182 YP_001892485.1 CDS Rpic_3953 NC_010678.1 213304 214131 R PFAM: Siderophore-interacting protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: rso:RS03709 hypothetical protein; FAD-binding 9 siderophore-interacting domain-containing protein complement(213304..214131) Ralstonia pickettii 12J 6285183 YP_001892486.1 CDS Rpic_3954 NC_010678.1 214232 214891 R PFAM: transcriptional regulator PadR family protein; KEGG: rso:RS03708 hypothetical protein; PadR family transcriptional regulator complement(214232..214891) Ralstonia pickettii 12J 6285184 YP_001892487.1 CDS Rpic_3955 NC_010678.1 215004 215519 R PFAM: regulatory protein MarR; KEGG: rme:Rmet_3441 MarR family transcriptional regulator; MarR family transcriptional regulator complement(215004..215519) Ralstonia pickettii 12J 6285185 YP_001892488.1 CDS Rpic_3956 NC_010678.1 215598 216095 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: reu:Reut_A3275 alkylhydroperoxidase AhpD core; alkylhydroperoxidase 215598..216095 Ralstonia pickettii 12J 6285186 YP_001892489.1 CDS Rpic_3957 NC_010678.1 216092 216541 D PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_3439 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 216092..216541 Ralstonia pickettii 12J 6285193 YP_001892490.1 CDS Rpic_3958 NC_010678.1 216538 217164 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: reu:Reut_A3273 (acyl-carrier protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) 216538..217164 Ralstonia pickettii 12J 6285195 YP_001892491.1 CDS Rpic_3959 NC_010678.1 217230 217877 R KEGG: rso:RSp0259 probable pyrrolidone-carboxylate peptidase protein; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase complement(217230..217877) Ralstonia pickettii 12J 6285196 YP_001892492.1 CDS Rpic_3960 NC_010678.1 217956 218375 R PFAM: regulatory protein MarR; KEGG: rso:RS03706 probable transcription regulator protein; MarR family transcriptional regulator complement(217956..218375) Ralstonia pickettii 12J 6285199 YP_001892493.1 CDS Rpic_3961 NC_010678.1 218461 220059 R KEGG: reh:H16_B1494 hypothetical protein; hypothetical protein complement(218461..220059) Ralstonia pickettii 12J 6285210 YP_001892494.1 CDS Rpic_3962 NC_010678.1 220251 221066 D PFAM: penicillin-binding protein transpeptidase; KEGG: pla:Plav_3016 beta-lactamase; beta-lactamase 220251..221066 Ralstonia pickettii 12J 6285211 YP_001892495.1 CDS Rpic_3963 NC_010678.1 221233 221676 D hypothetical protein 221233..221676 Ralstonia pickettii 12J 6285212 YP_001892496.1 CDS mdoD NC_010678.1 221728 223341 R involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D complement(221728..223341) Ralstonia pickettii 12J 6285213 YP_001892497.1 CDS Rpic_3965 NC_010678.1 223539 224681 D PFAM: beta-lactamase; KEGG: bra:BRADO6186 beta-lactamase; beta-lactamase 223539..224681 Ralstonia pickettii 12J 6285214 YP_001892498.1 CDS Rpic_3966 NC_010678.1 224712 225191 R PFAM: Domain of unknown function DUF1854; KEGG: rme:Rmet_0706 hypothetical protein; hypothetical protein complement(224712..225191) Ralstonia pickettii 12J 6285215 YP_001892499.1 CDS Rpic_3967 NC_010678.1 225205 227511 R PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: rme:Rmet_0705 ABC transporter-related protein; ABC transporter complement(225205..227511) Ralstonia pickettii 12J 6285216 YP_001892500.1 CDS Rpic_3968 NC_010678.1 227801 230461 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 227801..230461 Ralstonia pickettii 12J 6285217 YP_001892501.1 CDS Rpic_3969 NC_010678.1 230515 233082 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 230515..233082 Ralstonia pickettii 12J 6285220 YP_001892502.1 CDS Rpic_3970 NC_010678.1 233728 234309 D PFAM: flavin reductase domain protein FMN-binding; KEGG: cvi:CV_3073 hypothetical protein; flavin reductase domain-containing FMN-binding protein 233728..234309 Ralstonia pickettii 12J 6285224 YP_001892503.1 CDS Rpic_3971 NC_010678.1 234306 234818 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS03701 probable acetyltransferase protein; N-acetyltransferase GCN5 234306..234818 Ralstonia pickettii 12J 6285225 YP_001892504.1 CDS Rpic_3972 NC_010678.1 234815 235831 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS05569 probable transcription regulator protein; AraC family transcriptional regulator complement(234815..235831) Ralstonia pickettii 12J 6285227 YP_001892505.1 CDS Rpic_3973 NC_010678.1 235997 237130 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS05570 probable acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase 235997..237130 Ralstonia pickettii 12J 6285228 YP_001892506.1 CDS Rpic_3974 NC_010678.1 237192 238886 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS05571 probable acetyl-coenzyme A synthetase (acetate--CoA ligase) protein; AMP-dependent synthetase and ligase 237192..238886 Ralstonia pickettii 12J 6285230 YP_001892507.1 CDS Rpic_3975 NC_010678.1 238959 240506 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RSp0650 probable methylmalonate-semialdehyde dehydrogenase oxidoreductase protein; methylmalonate-semialdehyde dehydrogenase 238959..240506 Ralstonia pickettii 12J 6285232 YP_001892508.1 CDS Rpic_3976 NC_010678.1 240526 241419 D KEGG: rso:RSp0649 probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase protein; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase 240526..241419 Ralstonia pickettii 12J 6285236 YP_001892509.1 CDS Rpic_3977 NC_010678.1 241419 242216 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 241419..242216 Ralstonia pickettii 12J 6285237 YP_001892510.1 CDS Rpic_3978 NC_010678.1 242213 243364 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RS05575 enoyl-coenzyme A hydratase protein; Enoyl-CoA hydratase/isomerase 242213..243364 Ralstonia pickettii 12J 6285238 YP_001892511.1 CDS Rpic_3979 NC_010678.1 243716 245485 D KEGG: pau:PA14_46540 hypothetical protein; hypothetical protein 243716..245485 Ralstonia pickettii 12J 6285239 YP_001892512.1 CDS Rpic_3980 NC_010678.1 245513 247006 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(245513..247006) Ralstonia pickettii 12J 6285240 YP_001892513.1 CDS Rpic_3981 NC_010678.1 247489 248769 D PFAM: Chloride channel core; KEGG: rso:RSc1803 probable transmembrane protein; chloride channel protein 247489..248769 Ralstonia pickettii 12J 6285241 YP_001892514.1 CDS Rpic_3982 NC_010678.1 248808 249518 R PFAM: regulatory protein IclR; Helix-turn-helix type 11 domain protein; KEGG: bmu:Bmul_4707 IclR family transcriptional regulator; IclR family transcriptional regulator complement(248808..249518) Ralstonia pickettii 12J 6285243 YP_001892515.1 CDS Rpic_3983 NC_010678.1 249688 250386 D PFAM: Dimethylmenaquinone methyltransferase; KEGG: bch:Bcen2424_5398 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 249688..250386 Ralstonia pickettii 12J 6285247 YP_001892516.1 CDS Rpic_3984 NC_010678.1 250386 251336 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bch:Bcen2424_5397 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 250386..251336 Ralstonia pickettii 12J 6285249 YP_001892517.1 CDS Rpic_3985 NC_010678.1 251336 252292 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bch:Bcen2424_5396 SMP-30/gluconolaconase/LRE domain protein; SMP-30/gluconolaconase/LRE domain-containing protein 251336..252292 Ralstonia pickettii 12J 6285250 YP_001892518.1 CDS Rpic_3986 NC_010678.1 252355 253719 D PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5395 major facilitator superfamily MFS_1; major facilitator superfamily protein 252355..253719 Ralstonia pickettii 12J 6285252 YP_001892519.1 CDS Rpic_3987 NC_010678.1 253796 255121 D PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5390 major facilitator superfamily MFS_1; major facilitator superfamily protein 253796..255121 Ralstonia pickettii 12J 6285256 YP_001892520.1 CDS Rpic_3988 NC_010678.1 255157 255753 D PFAM: amidohydrolase 2; KEGG: bmu:Bmul_4697 amidohydrolase 2; amidohydrolase 2 255157..255753 Ralstonia pickettii 12J 6285257 YP_001892521.1 CDS Rpic_3989 NC_010678.1 255986 257926 R PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: xcb:XC_1442 extracellular serine protease; peptidase S8/S53 subtilisin kexin sedolisin complement(255986..257926) Ralstonia pickettii 12J 6285261 YP_001892522.1 CDS Rpic_3990 NC_010678.1 258219 259235 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: atc:AGR_L_1441 hypothetical protein; AraC family transcriptional regulator complement(258219..259235) Ralstonia pickettii 12J 6285263 YP_001892523.1 CDS Rpic_3991 NC_010678.1 259323 260840 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rso:RS04801 probable transmembrane protein; diguanylate cyclase complement(259323..260840) Ralstonia pickettii 12J 6285265 YP_001892524.1 CDS Rpic_3992 NC_010678.1 261135 261329 D KEGG: rso:RS04800 hypothetical protein; hypothetical protein 261135..261329 Ralstonia pickettii 12J 6285266 YP_001892525.1 CDS Rpic_3993 NC_010678.1 261614 264247 D PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: rso:RS04799 probable transmembrane protein; hypothetical protein 261614..264247 Ralstonia pickettii 12J 6285268 YP_001892526.1 CDS Rpic_3994 NC_010678.1 264244 266010 D PFAM: virulence factor family protein; KEGG: rso:RS04798 probable AcvB-related protein; virulence factor family protein 264244..266010 Ralstonia pickettii 12J 6285271 YP_001892527.1 CDS Rpic_3995 NC_010678.1 266070 267791 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rso:RS04796 sulfate transporter transmembrane protein; sulfate transporter complement(266070..267791) Ralstonia pickettii 12J 6285274 YP_001892528.1 CDS Rpic_3996 NC_010678.1 267871 268422 R KEGG: rso:RS04795 probable alanine-rich signal peptide protein; alanine-rich signal peptide protein complement(267871..268422) Ralstonia pickettii 12J 6285276 YP_001892529.1 CDS Rpic_3997 NC_010678.1 268632 269558 R PFAM: regulatory protein MarR; regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1766 transcriptional regulator, LysR-family; MarR family transcriptional regulator complement(268632..269558) Ralstonia pickettii 12J 6285277 YP_001892530.1 CDS Rpic_3998 NC_010678.1 269671 270432 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1767 oxidoreductase; short chain dehydrogenase 269671..270432 Ralstonia pickettii 12J 6285280 YP_001892531.1 CDS Rpic_3999 NC_010678.1 270729 271370 D PFAM: YheO domain protein; KEGG: rso:RS04794 hypothetical protein; YheO domain-containing protein 270729..271370 Ralstonia pickettii 12J 6285281 YP_001892532.1 CDS Rpic_4000 NC_010678.1 271367 272344 D catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 271367..272344 Ralstonia pickettii 12J 6285283 YP_001892533.1 CDS Rpic_4001 NC_010678.1 272341 272730 D PFAM: Endoribonuclease L-PSP; KEGG: rso:RS04792 hypothetical protein; endoribonuclease L-PSP 272341..272730 Ralstonia pickettii 12J 6285285 YP_001892534.1 CDS Rpic_4002 NC_010678.1 272882 273763 D PFAM: type IV pilus assembly PilZ; KEGG: reh:H16_A1321 hypothetical protein; type IV pilus assembly PilZ 272882..273763 Ralstonia pickettii 12J 6285286 YP_001892535.1 CDS Rpic_4003 NC_010678.1 273768 274652 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS04791 transcription regulator protein; LysR family transcriptional regulator complement(273768..274652) Ralstonia pickettii 12J 6285287 YP_001892536.1 CDS Rpic_4004 NC_010678.1 274768 275205 D PFAM: transmembrane pair domain protein; KEGG: rso:RS04790 hypothetical protein; hypothetical protein 274768..275205 Ralstonia pickettii 12J 6285290 YP_001892537.1 CDS Rpic_4005 NC_010678.1 275320 275961 D PFAM: regulatory protein LuxR; KEGG: rso:RS04789 transcription regulator protein; LuxR family transcriptional regulator 275320..275961 Ralstonia pickettii 12J 6285291 YP_001892538.1 CDS Rpic_4006 NC_010678.1 275979 276197 R KEGG: rso:RS04788 hypothetical protein; hypothetical protein complement(275979..276197) Ralstonia pickettii 12J 6285292 YP_001892539.1 CDS Rpic_4008 NC_010678.1 276892 277290 R KEGG: rso:RS03031 hypothetical protein; hypothetical protein complement(276892..277290) Ralstonia pickettii 12J 6285897 YP_001892540.1 CDS Rpic_4009 NC_010678.1 277326 278354 R KEGG: rso:RS03032 periplasmic substrate-binding transmembrane protein; periplasmic substrate-binding transmembrane protein complement(277326..278354) Ralstonia pickettii 12J 6285300 YP_001892541.1 CDS Rpic_4010 NC_010678.1 278658 279554 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RS03033 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein complement(278658..279554) Ralstonia pickettii 12J 6285301 YP_001892542.1 CDS Rpic_4011 NC_010678.1 279544 280338 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RS03034 probable ATP-binding ABC transporter protein; ABC transporter complement(279544..280338) Ralstonia pickettii 12J 6285303 YP_001892543.1 CDS Rpic_4012 NC_010678.1 280395 281117 R PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: rso:RS03035 probable transcription regulator protein; GntR family transcriptional regulator complement(280395..281117) Ralstonia pickettii 12J 6285305 YP_001892544.1 CDS Rpic_4013 NC_010678.1 281264 283540 R KEGG: rso:RSp1505 probable nitric oxide reductase (subunit B) transmembrane protein; nitric oxide reductase subunit B complement(281264..283540) Ralstonia pickettii 12J 6285306 YP_001892545.1 CDS Rpic_4014 NC_010678.1 283573 283863 R KEGG: rme:Rmet_4922 hypothetical protein; hypothetical protein complement(283573..283863) Ralstonia pickettii 12J 6285309 YP_001892546.1 CDS Rpic_4015 NC_010678.1 284137 285636 D KEGG: rso:RS03038 probable major anaerobically induced outer membrane transmembrane protein; TIGRFAM: nitrite reductase, copper-containing; PFAM: blue (type 1) copper domain protein; multicopper oxidase type 1; cytochrome c class I; multicopper oxidase type 2; multicopper oxidase type 3; nitrite reductase 284137..285636 Ralstonia pickettii 12J 6285310 YP_001892547.1 CDS Rpic_4016 NC_010678.1 285653 286444 D PFAM: protein of unknown function DUF323; KEGG: rso:RS03039 probable signal peptide protein; hypothetical protein 285653..286444 Ralstonia pickettii 12J 6285311 YP_001892548.1 CDS Rpic_4017 NC_010678.1 286441 287025 D PFAM: electron transport protein SCO1/SenC; KEGG: rso:RS03040 probable signal peptide protein; electron transport protein SCO1/SenC 286441..287025 Ralstonia pickettii 12J 6285314 YP_001892549.1 CDS Rpic_4018 NC_010678.1 287044 287892 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reh:H16_A0072 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase complement(287044..287892) Ralstonia pickettii 12J 6285316 YP_001892550.1 CDS Rpic_4019 NC_010678.1 287889 288656 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_A0071 transcriptional regulator, GntR-family; GntR family transcriptional regulator complement(287889..288656) Ralstonia pickettii 12J 6285317 YP_001892551.1 CDS Rpic_4020 NC_010678.1 288887 290194 D PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_A0048 major facilitator superfamily MFS_1; major facilitator superfamily protein 288887..290194 Ralstonia pickettii 12J 6285319 YP_001892552.1 CDS Rpic_4021 NC_010678.1 290357 291085 D PFAM: Asp/Glu/hydantoin racemase; KEGG: reu:Reut_A0046 Asp/Glu racemase; Asp/Glu/hydantoin racemase 290357..291085 Ralstonia pickettii 12J 6285324 YP_001892553.1 CDS Rpic_4022 NC_010678.1 291107 292522 D catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 291107..292522 Ralstonia pickettii 12J 6285328 YP_001892554.1 CDS Rpic_4023 NC_010678.1 292553 293290 D PFAM: Asp/Glu/hydantoin racemase; KEGG: rme:Rmet_3885 Asp/Glu racemase; Asp/Glu/hydantoin racemase 292553..293290 Ralstonia pickettii 12J 6285329 YP_001892555.1 CDS Rpic_4025 NC_010678.1 293705 293872 R KEGG: cvi:CV_2452 probable linoleoyl-CoA desaturase; linoleoyl-CoA desaturase complement(293705..293872) Ralstonia pickettii 12J 6285898 YP_001892556.1 CDS Rpic_4026 NC_010678.1 293966 294670 R PFAM: cyclic nucleotide-binding; KEGG: bra:BRADO5261 transcriptional regulator with cAMP binding domain belongs to HTH Crp family; Crp family transcriptional regulator complement(293966..294670) Ralstonia pickettii 12J 6285335 YP_001892557.1 CDS Rpic_4027 NC_010678.1 294663 295298 R PFAM: DSBA oxidoreductase; KEGG: bch:Bcen2424_5467 DsbA oxidoreductase; DSBA oxidoreductase complement(294663..295298) Ralstonia pickettii 12J 6285337 YP_001892558.1 CDS Rpic_4028 NC_010678.1 295308 295982 R KEGG: fal:FRAAL3149 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(295308..295982) Ralstonia pickettii 12J 6285338 YP_001892559.1 CDS Rpic_4029 NC_010678.1 296011 296775 R PFAM: coenzyme A transferase; KEGG: cbe:Cbei_2654 3-oxoacid CoA-transferase, A subunit; coenzyme A transferase complement(296011..296775) Ralstonia pickettii 12J 6285340 YP_001892560.1 CDS Rpic_4030 NC_010678.1 297014 298231 D PFAM: sodium/hydrogen exchanger; KEGG: rso:RS03045 probable cation-efflux system transmembrane protein; sodium/hydrogen exchanger 297014..298231 Ralstonia pickettii 12J 6285341 YP_001892561.1 CDS Rpic_4031 NC_010678.1 298275 298829 D PFAM: NADPH-dependent FMN reductase; KEGG: rso:RS03046 hypothetical protein; NADPH-dependent FMN reductase 298275..298829 Ralstonia pickettii 12J 6285342 YP_001892562.1 CDS Rpic_4032 NC_010678.1 299241 300083 R hypothetical protein complement(299241..300083) Ralstonia pickettii 12J 6285343 YP_001892563.1 CDS Rpic_4033 NC_010678.1 300214 300921 D PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_4519 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 300214..300921 Ralstonia pickettii 12J 6285346 YP_001892564.1 CDS Rpic_4034 NC_010678.1 300931 302544 R KEGG: rso:RS03125 probable transmembrane protein; hypothetical protein complement(300931..302544) Ralstonia pickettii 12J 6285347 YP_001892565.1 CDS Rpic_4035 NC_010678.1 302703 303215 R KEGG: rso:RS03126 hypothetical protein; hypothetical protein complement(302703..303215) Ralstonia pickettii 12J 6285348 YP_001892566.1 CDS Rpic_4036 NC_010678.1 303474 304295 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mlo:mll6978 ABC-transport protein, ATP-binding protein; ABC transporter 303474..304295 Ralstonia pickettii 12J 6285349 YP_001892567.1 CDS Rpic_4037 NC_010678.1 304279 305109 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1202 ABC transporter (permease); binding-protein-dependent transport system inner membrane protein 304279..305109 Ralstonia pickettii 12J 6285351 YP_001892568.1 CDS Rpic_4038 NC_010678.1 305143 306147 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: mlo:mll6979 ABC transporter, periplasmic substrate-binding protein; NMT1/THI5 like domain-containing protein 305143..306147 Ralstonia pickettii 12J 6285353 YP_001892569.1 CDS Rpic_4039 NC_010678.1 306168 306962 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_4808 IclR family transcriptional regulator; IclR family transcriptional regulator 306168..306962 Ralstonia pickettii 12J 6285355 YP_001892570.1 CDS Rpic_4040 NC_010678.1 307034 308221 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2210 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 307034..308221 Ralstonia pickettii 12J 6285358 YP_001892571.1 CDS Rpic_4041 NC_010678.1 308224 309078 D KEGG: rme:Rmet_4144 citrate synthase; citrate synthase 308224..309078 Ralstonia pickettii 12J 6285362 YP_001892572.1 CDS Rpic_4042 NC_010678.1 309075 309971 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pol:Bpro_4512 gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 309075..309971 Ralstonia pickettii 12J 6285363 YP_001892573.1 CDS Rpic_4043 NC_010678.1 310832 311149 D with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 310832..311149 Ralstonia pickettii 12J 6285367 YP_001892574.1 CDS Rpic_4044 NC_010678.1 311227 311787 D With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 311227..311787 Ralstonia pickettii 12J 6285369 YP_001892575.1 CDS Rpic_4045 NC_010678.1 312328 313188 D With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 312328..313188 Ralstonia pickettii 12J 6285371 YP_001892576.1 CDS motB NC_010678.1 313389 314336 D with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 313389..314336 Ralstonia pickettii 12J 6285373 YP_001892577.1 CDS Rpic_4047 NC_010678.1 314362 314775 D PFAM: response regulator receiver; KEGG: rso:RSp1409 chemotaxis response regulator transcription regulator protein; response regulator receiver protein 314362..314775 Ralstonia pickettii 12J 6285377 YP_001892578.1 CDS Rpic_4048 NC_010678.1 314794 316968 D PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheY binding; KEGG: rso:RSp1408 probable chemotaxis sensor histidine kinase transcription regulator protein; chemotaxis protein CheA 314794..316968 Ralstonia pickettii 12J 6285379 YP_001892579.1 CDS Rpic_4049 NC_010678.1 317049 317540 D PFAM: CheW domain protein; KEGG: rso:RSp1407 probable chemotaxis protein CheW; chemotaxis protein CheW 317049..317540 Ralstonia pickettii 12J 6285381 YP_001892580.1 CDS Rpic_4050 NC_010678.1 317664 319511 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rso:RSp1406 probable methyl-accepting chemotaxis I (serine chemoreceptor protein) transmembrane; methyl-accepting chemotaxis sensory transducer 317664..319511 Ralstonia pickettii 12J 6285383 YP_001892581.1 CDS Rpic_4051 NC_010678.1 319736 321640 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: reu:Reut_B5602 histidine kinase, HAMP region:bacterial chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 319736..321640 Ralstonia pickettii 12J 6285385 YP_001892582.1 CDS Rpic_4052 NC_010678.1 321744 322625 D PFAM: MCP methyltransferase CheR-type; KEGG: rso:RSp1405 probable chemotaxis protein methyltransferase; chemotaxis protein CheR 321744..322625 Ralstonia pickettii 12J 6285387 YP_001892583.1 CDS Rpic_4053 NC_010678.1 322622 323332 D stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: rso:RS02054 probable chemotaxis protein; chemotaxis protein CheD 322622..323332 Ralstonia pickettii 12J 6285389 YP_001892584.1 CDS Rpic_4054 NC_010678.1 323356 324483 D regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 323356..324483 Ralstonia pickettii 12J 6285390 YP_001892585.1 CDS Rpic_4055 NC_010678.1 324633 325034 D PFAM: response regulator receiver; KEGG: rso:RSp1402 probable chemotaxis response regulator transcription regulator protein; response regulator receiver protein 324633..325034 Ralstonia pickettii 12J 6285391 YP_001892586.1 CDS Rpic_4056 NC_010678.1 325034 325702 D cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis protein CheZ 325034..325702 Ralstonia pickettii 12J 6285392 YP_001892587.1 CDS Rpic_4057 NC_010678.1 325778 326818 R PFAM: ApbE family lipoprotein; KEGG: rso:RSp1366 probable thiamine biosynthesis ApbE transmembrane protein; ApbE family lipoprotein complement(325778..326818) Ralstonia pickettii 12J 6285393 YP_001892588.1 CDS Rpic_4058 NC_010678.1 326823 327245 R PFAM: cytochrome c class I; KEGG: rso:RS02091 probable lipoprotein; cytochrome c class I complement(326823..327245) Ralstonia pickettii 12J 6285395 YP_001892589.1 CDS Rpic_4059 NC_010678.1 327484 329433 D reduces nitrous oxide to nitrogen; nitrous-oxide reductase 327484..329433 Ralstonia pickettii 12J 6285396 YP_001892590.1 CDS Rpic_4060 NC_010678.1 329452 332115 D PFAM: FMN-binding domain protein; KEGG: rso:RSp1369 probable transmembrane regulatory NosR transcription regulator protein; FMN-binding domain-containing protein 329452..332115 Ralstonia pickettii 12J 6285397 YP_001892591.1 CDS Rpic_4061 NC_010678.1 332112 333407 D PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: rso:RSp1370 probable copper-binding periplasmic NosD signal peptide protein; copper-binding protein 332112..333407 Ralstonia pickettii 12J 6285398 YP_001892592.1 CDS Rpic_4062 NC_010678.1 333385 334341 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rme:Rmet_4914 ABC transporter; ABC transporter 333385..334341 Ralstonia pickettii 12J 6285399 YP_001892593.1 CDS Rpic_4063 NC_010678.1 334338 335162 D KEGG: rso:RSp1372 probable NosY transmembrane protein; NosY transmembrane protein 334338..335162 Ralstonia pickettii 12J 6285403 YP_001892594.1 CDS Rpic_4064 NC_010678.1 335159 335689 D PFAM: NosL family protein; KEGG: rme:Rmet_4912 NosL; NosL family protein 335159..335689 Ralstonia pickettii 12J 6285404 YP_001892595.1 CDS Rpic_4065 NC_010678.1 335692 336294 D KEGG: rme:Rmet_4911 hypothetical protein; hypothetical protein 335692..336294 Ralstonia pickettii 12J 6285406 YP_001892596.1 CDS Rpic_4066 NC_010678.1 336488 337651 D TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: rso:RSp1394 probable flagellar biosynthetic FlhB transmembrane protein; flagellar biosynthetic protein FlhB 336488..337651 Ralstonia pickettii 12J 6285409 YP_001892597.1 CDS Rpic_4067 NC_010678.1 337945 340071 D TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: rso:RSp1393 probable flagellar biosynthesis FlhA transmembrane protein; flagellar biosynthesis protein FlhA 337945..340071 Ralstonia pickettii 12J 6285413 YP_001892598.1 CDS flhF NC_010678.1 340068 341966 D positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 340068..341966 Ralstonia pickettii 12J 6285415 YP_001892599.1 CDS Rpic_4069 NC_010678.1 341982 342773 D KEGG: rso:RS02067 hypothetical protein; hypothetical protein 341982..342773 Ralstonia pickettii 12J 6285419 YP_001892600.1 CDS fliA NC_010678.1 342782 343543 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 342782..343543 Ralstonia pickettii 12J 6285420 YP_001892601.1 CDS Rpic_4071 NC_010678.1 343922 345349 D TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: rso:RSc2118 xanthine permease transmembrane protein; xanthine permease 343922..345349 Ralstonia pickettii 12J 6285423 YP_001892602.1 CDS Rpic_4072 NC_010678.1 345378 346460 R PFAM: aldose 1-epimerase; KEGG: bxe:Bxe_B2624 aldose 1-epimerase; aldose 1-epimerase complement(345378..346460) Ralstonia pickettii 12J 6285424 YP_001892603.1 CDS Rpic_4073 NC_010678.1 346457 347680 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2623 AraC family transcriptional regulator; AraC family transcriptional regulator complement(346457..347680) Ralstonia pickettii 12J 6285426 YP_001892604.1 CDS Rpic_4074 NC_010678.1 347950 348978 D KEGG: bxe:Bxe_B2621 ABC xylose transporter, periplasmic ligand binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; sugar ABC transporter substrate-binding protein 347950..348978 Ralstonia pickettii 12J 6285427 YP_001892605.1 CDS Rpic_4075 NC_010678.1 349060 350613 D with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 349060..350613 Ralstonia pickettii 12J 6285434 YP_001892606.1 CDS Rpic_4076 NC_010678.1 350616 351818 D PFAM: inner-membrane translocator; KEGG: bmu:Bmul_4211 monosaccharide-transporting ATPase; monosaccharide-transporting ATPase 350616..351818 Ralstonia pickettii 12J 6285435 YP_001892607.1 CDS Rpic_4077 NC_010678.1 351865 352632 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C1363 dehydrogenase; short-chain dehydrogenase/reductase SDR 351865..352632 Ralstonia pickettii 12J 6285438 YP_001892608.1 CDS Rpic_4078 NC_010678.1 352629 353534 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_C1362 senescence marker protein-30 (SMP-30); SMP-30/gluconolaconase/LRE domain-containing protein 352629..353534 Ralstonia pickettii 12J 6285440 YP_001892609.1 CDS Rpic_4079 NC_010678.1 353525 354709 R KEGG: bch:Bcen2424_6697 hypothetical protein; hypothetical protein complement(353525..354709) Ralstonia pickettii 12J 6285441 YP_001892610.1 CDS Rpic_4080 NC_010678.1 354849 355604 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bpt:Bpet4676 IclR family transcriptional regulator; IclR family transcriptional regulator 354849..355604 Ralstonia pickettii 12J 6285442 YP_001892611.1 CDS Rpic_4081 NC_010678.1 355694 356710 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bch:Bcen2424_6695 LacI family transcriptional regulator; LacI family transcriptional regulator 355694..356710 Ralstonia pickettii 12J 6285445 YP_001892612.1 CDS Rpic_4082 NC_010678.1 356732 358516 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(356732..358516) Ralstonia pickettii 12J 6285446 YP_001892613.1 CDS Rpic_4083 NC_010678.1 358820 359359 D KEGG: aav:Aave_1254 hypothetical protein; hypothetical protein 358820..359359 Ralstonia pickettii 12J 6285447 YP_001892614.1 CDS Rpic_4084 NC_010678.1 359364 360023 R PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_A0706 isochorismatase hydrolase; isochorismatase hydrolase complement(359364..360023) Ralstonia pickettii 12J 6285448 YP_001892615.1 CDS Rpic_4085 NC_010678.1 360158 361153 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bpt:Bpet2223 transcriptional regulator, AraC-family; AraC family transcriptional regulator 360158..361153 Ralstonia pickettii 12J 6285450 YP_001892616.1 CDS Rpic_4086 NC_010678.1 361195 361377 R PFAM: 17 kDa surface antigen; KEGG: rso:RS02072 lipoprotein; hypothetical protein complement(361195..361377) Ralstonia pickettii 12J 6285451 YP_001892617.1 CDS Rpic_4087 NC_010678.1 361450 362010 R PFAM: protein of unknown function YGGT; KEGG: rso:RS02073 hypothetical protein; hypothetical protein complement(361450..362010) Ralstonia pickettii 12J 6285455 YP_001892618.1 CDS Rpic_4088 NC_010678.1 362188 362751 D PFAM: PEBP family protein; KEGG: spe:Spro_2903 PEBP family protein; PEBP family protein 362188..362751 Ralstonia pickettii 12J 6285457 YP_001892619.1 CDS Rpic_4089 NC_010678.1 362801 363787 R KEGG: rso:RSp1383 alkanesulfonates binding protein precursor; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter periplasmic substrate-binding protein complement(362801..363787) Ralstonia pickettii 12J 6285458 YP_001892620.1 CDS Rpic_4090 NC_010678.1 363885 364178 R KEGG: pfo:Pfl_3157 hypothetical protein; hypothetical protein complement(363885..364178) Ralstonia pickettii 12J 6285459 YP_001892621.1 CDS Rpic_4091 NC_010678.1 364165 365124 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: pen:PSEEN0177 hypothetical protein; PBS lyase HEAT domain-containing protein complement(364165..365124) Ralstonia pickettii 12J 6285461 YP_001892622.1 CDS Rpic_4092 NC_010678.1 365132 365398 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bch:Bcen2424_1973 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(365132..365398) Ralstonia pickettii 12J 6285462 YP_001892623.1 CDS Rpic_4093 NC_010678.1 365401 367125 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reh:H16_B2242 oxidoreductase; oxidoreductase complement(365401..367125) Ralstonia pickettii 12J 6285463 YP_001892624.1 CDS Rpic_4094 NC_010678.1 367122 367907 R PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: reh:H16_B2241 transcriptional regulator, GntR-family; GntR family transcriptional regulator complement(367122..367907) Ralstonia pickettii 12J 6285468 YP_001892625.1 CDS Rpic_4095 NC_010678.1 368303 369289 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 368303..369289 Ralstonia pickettii 12J 6285469 YP_001892626.1 CDS Rpic_4096 NC_010678.1 369390 370967 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: bam:Bamb_6194 ABC transporter; ABC transporter 369390..370967 Ralstonia pickettii 12J 6285472 YP_001892627.1 CDS Rpic_4097 NC_010678.1 370964 372013 D PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator; monosaccharide-transporting ATPase 370964..372013 Ralstonia pickettii 12J 6285474 YP_001892628.1 CDS Rpic_4098 NC_010678.1 372010 373083 D PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner-membrane translocator; monosaccharide-transporting ATPase 372010..373083 Ralstonia pickettii 12J 6285478 YP_001892629.1 CDS Rpic_4099 NC_010678.1 373130 373492 D PFAM: dehydroquinase class II; KEGG: ppu:PP_3003 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase 373130..373492 Ralstonia pickettii 12J 6285479 YP_001892630.1 CDS Rpic_4100 NC_010678.1 373541 374110 R KEGG: rme:Rmet_5010 hypothetical protein; hypothetical protein complement(373541..374110) Ralstonia pickettii 12J 6285480 YP_001892631.1 CDS Rpic_4101 NC_010678.1 374148 374573 R KEGG: syg:sync_0841 hypothetical protein; hypothetical protein complement(374148..374573) Ralstonia pickettii 12J 6285483 YP_001892632.1 CDS Rpic_4102 NC_010678.1 374596 375258 R PFAM: bifunctional deaminase-reductase domain protein; KEGG: rme:Rmet_4484 bifunctional deaminase-reductase-like protein; deaminase/reductase domain-containing protein complement(374596..375258) Ralstonia pickettii 12J 6285484 YP_001892633.1 CDS rdgC NC_010678.1 375434 376357 D Required for efficient pilin antigenic variation; recombination associated protein 375434..376357 Ralstonia pickettii 12J 6285485 YP_001892634.1 CDS Rpic_4106 NC_010678.1 377283 377714 R KEGG: reu:Reut_B4592 hypothetical protein; hypothetical protein complement(377283..377714) Ralstonia pickettii 12J 6285491 YP_001892635.1 CDS Rpic_4107 NC_010678.1 378084 379184 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 378084..379184 Ralstonia pickettii 12J 6285487 YP_001892636.1 CDS Rpic_4108 NC_010678.1 379192 380004 D PFAM: alpha/beta hydrolase fold; KEGG: ppg:PputGB1_3299 alpha/beta hydrolase fold; alpha/beta hydrolase 379192..380004 Ralstonia pickettii 12J 6285494 YP_001892637.1 CDS Rpic_4109 NC_010678.1 380307 381470 D PFAM: fatty acid desaturase; KEGG: bch:Bcen2424_0980 alkane 1-monooxygenase; alkane 1-monooxygenase 380307..381470 Ralstonia pickettii 12J 6285495 YP_001892638.1 CDS Rpic_4110 NC_010678.1 381480 381743 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: pna:Pnap_4882 hypothetical protein; cupin complement(381480..381743) Ralstonia pickettii 12J 6285496 YP_001892639.1 CDS Rpic_4111 NC_010678.1 381972 382871 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2981 AraC family transcriptional regulator; AraC family transcriptional regulator 381972..382871 Ralstonia pickettii 12J 6285497 YP_001892640.1 CDS Rpic_4112 NC_010678.1 382967 383857 D PFAM: NmrA family protein; KEGG: bur:Bcep18194_B2980 NmrA-like protein; NmrA family protein 382967..383857 Ralstonia pickettii 12J 6285498 YP_001892641.1 CDS Rpic_4113 NC_010678.1 383983 384768 D KEGG: pnu:Pnuc_1326 hypothetical protein; hypothetical protein 383983..384768 Ralstonia pickettii 12J 6285499 YP_001892642.1 CDS Rpic_4114 NC_010678.1 384843 385367 D KEGG: rso:RS02076 hypothetical signal peptide protein; hypothetical protein 384843..385367 Ralstonia pickettii 12J 6285503 YP_001892643.1 CDS Rpic_4115 NC_010678.1 385400 385879 R PFAM: PEBP family protein; KEGG: rso:RS01998 hypothetical protein; PEBP family protein complement(385400..385879) Ralstonia pickettii 12J 6285504 YP_001892644.1 CDS Rpic_4116 NC_010678.1 386098 386460 R PFAM: protein of unknown function DUF1304; KEGG: rso:RS04765 probable transmembrane protein; hypothetical protein complement(386098..386460) Ralstonia pickettii 12J 6285505 YP_001892645.1 CDS Rpic_4117 NC_010678.1 386646 387362 D PFAM: dienelactone hydrolase; KEGG: rso:RS04764 transmembrane protein; Carboxymethylenebutenolidase 386646..387362 Ralstonia pickettii 12J 6285507 YP_001892646.1 CDS Rpic_4118 NC_010678.1 387783 388055 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 387783..388055 Ralstonia pickettii 12J 6285510 YP_001892647.1 CDS Rpic_4119 NC_010678.1 388079 389701 R PFAM: amine oxidase; KEGG: rso:RS04763 hypothetical protein; amine oxidase complement(388079..389701) Ralstonia pickettii 12J 6285511 YP_001892648.1 CDS Rpic_4120 NC_010678.1 389701 391278 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(389701..391278) Ralstonia pickettii 12J 6285513 YP_001892649.1 CDS Rpic_4121 NC_010678.1 391456 391854 D PFAM: protein of unknown function DUF350; KEGG: rso:RS05342 probable transmembrane protein; hypothetical protein 391456..391854 Ralstonia pickettii 12J 6285514 YP_001892650.1 CDS Rpic_4122 NC_010678.1 391904 392953 D KEGG: rso:RS05341 transmembrane protein; hypothetical protein 391904..392953 Ralstonia pickettii 12J 6285519 YP_001892651.1 CDS Rpic_4123 NC_010678.1 393041 394486 D KEGG: rso:RS05340 probable transmembrane protein; hypothetical protein 393041..394486 Ralstonia pickettii 12J 6285523 YP_001892652.1 CDS Rpic_4124 NC_010678.1 394483 394671 D KEGG: rso:RS05339 probable serine-rich transmembrane protein; serine-rich transmembrane protein 394483..394671 Ralstonia pickettii 12J 6285525 YP_001892653.1 CDS Rpic_4125 NC_010678.1 394668 395093 D TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: rso:RS05338 transmembrane protein; S-adenosylmethionine decarboxylase 394668..395093 Ralstonia pickettii 12J 6285526 YP_001892654.1 CDS Rpic_4126 NC_010678.1 395095 396141 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: pen:PSEEN2246 diguanylate cyclase (GGDEF domain); GAF sensor-containing diguanylate cyclase complement(395095..396141) Ralstonia pickettii 12J 6285527 YP_001892655.1 CDS fumC NC_010678.1 396242 397627 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(396242..397627) Ralstonia pickettii 12J 6285530 YP_001892656.1 CDS Rpic_4128 NC_010678.1 397763 399235 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS05323 probable transporter transmembrane protein; EmrB/QacA subfamily drug resistance transporter 397763..399235 Ralstonia pickettii 12J 6285531 YP_001892657.1 CDS Rpic_4129 NC_010678.1 399261 401411 R PFAM: UvrD/REP helicase; KEGG: rso:RS05321 probable ATP-dependent DNA helicase II protein; UvrD/REP helicase complement(399261..401411) Ralstonia pickettii 12J 6285533 YP_001892658.1 CDS Rpic_4130 NC_010678.1 401512 401829 R KEGG: bam:Bamb_5087 hypothetical protein; hypothetical protein complement(401512..401829) Ralstonia pickettii 12J 6285534 YP_001892659.1 CDS Rpic_4131 NC_010678.1 401976 402308 R PFAM: protein of unknown function UPF0060; KEGG: bur:Bcep18194_A4425 hypothetical protein; hypothetical protein complement(401976..402308) Ralstonia pickettii 12J 6285535 YP_001892660.1 CDS Rpic_4132 NC_010678.1 402391 402804 R KEGG: bam:Bamb_1422 PfkB domain protein; PfkB domain-containing protein complement(402391..402804) Ralstonia pickettii 12J 6285536 YP_001892661.1 CDS Rpic_4133 NC_010678.1 402932 403954 R PFAM: GumN family protein; KEGG: aav:Aave_0743 GumN family protein; GumN family protein complement(402932..403954) Ralstonia pickettii 12J 6285537 YP_001892662.1 CDS Rpic_4134 NC_010678.1 404038 405219 R KEGG: rso:RS05318 hypothetical protein; hypothetical protein complement(404038..405219) Ralstonia pickettii 12J 6285539 YP_001892663.1 CDS Rpic_4135 NC_010678.1 405407 405808 D KEGG: rso:RS05317 probable transmembrane protein; hypothetical protein 405407..405808 Ralstonia pickettii 12J 6285540 YP_001892664.1 CDS Rpic_4136 NC_010678.1 405891 408209 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS05316 ferrisiderophore receptor protein; TonB-dependent receptor 405891..408209 Ralstonia pickettii 12J 6285541 YP_001892665.1 CDS Rpic_4137 NC_010678.1 408197 409462 D PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: rso:RS05315 signal peptide protein; glycosyl hydrolase family protein 408197..409462 Ralstonia pickettii 12J 6285543 YP_001892666.1 CDS Rpic_4138 NC_010678.1 409459 409965 D KEGG: rso:RS05314 probable signal peptide protein; signal peptide protein 409459..409965 Ralstonia pickettii 12J 6285545 YP_001892667.1 CDS Rpic_4139 NC_010678.1 410199 410477 R hypothetical protein complement(410199..410477) Ralstonia pickettii 12J 6285547 YP_001892668.1 CDS Rpic_4140 NC_010678.1 410495 411253 R PFAM: protein of unknown function DUF81; KEGG: rso:RS05313 probable integral membrane transmembrane protein; hypothetical protein complement(410495..411253) Ralstonia pickettii 12J 6285551 YP_001892669.1 CDS Rpic_4141 NC_010678.1 411384 412268 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05312 probable transcription regulator protein; LysR family transcriptional regulator 411384..412268 Ralstonia pickettii 12J 6285552 YP_001892670.1 CDS Rpic_4142 NC_010678.1 412413 412934 D KEGG: rso:RS05311 probable transmembrane protein; hypothetical protein 412413..412934 Ralstonia pickettii 12J 6285553 YP_001892671.1 CDS Rpic_4143 NC_010678.1 413084 414781 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS05310 probable acetyl-coenzyme A synthetase (acetate--CoA ligase) protein; AMP-dependent synthetase and ligase 413084..414781 Ralstonia pickettii 12J 6285556 YP_001892672.1 CDS Rpic_4144 NC_010678.1 414858 415199 R KEGG: rso:RS05307 hypothetical protein; hypothetical protein complement(414858..415199) Ralstonia pickettii 12J 6285557 YP_001892673.1 CDS Rpic_4145 NC_010678.1 415470 415670 R hypothetical protein complement(415470..415670) Ralstonia pickettii 12J 6285558 YP_001892674.1 CDS Rpic_4146 NC_010678.1 416089 417147 D KEGG: rso:RS05306 probable signal peptide protein; signal peptide protein 416089..417147 Ralstonia pickettii 12J 6285559 YP_001892675.1 CDS Rpic_4149 NC_010678.1 418799 418930 R KEGG: rso:RS05305 probable lipoprotein transmembrane; lipoprotein transmembrane complement(418799..418930) Ralstonia pickettii 12J 6285698 YP_001892676.1 CDS Rpic_4150 NC_010678.1 418995 419120 R hypothetical protein complement(418995..419120) Ralstonia pickettii 12J 6285561 YP_001892677.1 CDS Rpic_4151 NC_010678.1 419356 419502 D KEGG: rso:RS05304 probable transmembrane protein; hypothetical protein 419356..419502 Ralstonia pickettii 12J 6285564 YP_001892678.1 CDS Rpic_4152 NC_010678.1 419646 420272 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rso:RSp1258 [acyl-carrier-protein] phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(419646..420272) Ralstonia pickettii 12J 6285565 YP_001892679.1 CDS Rpic_4153 NC_010678.1 420400 421347 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05302 probable transcription regulator protein; LysR family transcriptional regulator 420400..421347 Ralstonia pickettii 12J 6285567 YP_001892680.1 CDS Rpic_4154 NC_010678.1 421438 423018 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS05301 probable integral membrane transmembrane protein; EmrB/QacA subfamily drug resistance transporter 421438..423018 Ralstonia pickettii 12J 6285568 YP_001892681.1 CDS Rpic_4155 NC_010678.1 423030 423926 R KEGG: rso:RS05300 hypothetical protein; hypothetical protein complement(423030..423926) Ralstonia pickettii 12J 6285569 YP_001892682.1 CDS Rpic_4156 NC_010678.1 424111 425040 D KEGG: rso:RS03196 probable signal peptide protein; signal peptide protein 424111..425040 Ralstonia pickettii 12J 6285570 YP_001892683.1 CDS Rpic_4157 NC_010678.1 425045 425476 R KEGG: rso:RS03194 hypothetical protein; hypothetical protein complement(425045..425476) Ralstonia pickettii 12J 6285571 YP_001892684.1 CDS Rpic_4158 NC_010678.1 425737 426768 R PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: rso:RS03187 transmembrane cytochrome BD-II oxidase (subunit II) oxidoreductase protein; cytochrome bd ubiquinol oxidase subunit II complement(425737..426768) Ralstonia pickettii 12J 6285573 YP_001892685.1 CDS Rpic_4159 NC_010678.1 426765 428138 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: rso:RS03186 transmembrane cytochrome BD-II oxidase (subunit I) oxidoreductase protein; cytochrome bd ubiquinol oxidase subunit I complement(426765..428138) Ralstonia pickettii 12J 6285574 YP_001892686.1 CDS Rpic_4160 NC_010678.1 428154 428714 R KEGG: rso:RS03185 hypothetical protein; hypothetical protein complement(428154..428714) Ralstonia pickettii 12J 6285575 YP_001892687.1 CDS Rpic_4161 NC_010678.1 428923 429177 D PFAM: transglycosylase; KEGG: bxe:Bxe_B1859 hypothetical protein; transglycosylase 428923..429177 Ralstonia pickettii 12J 6285576 YP_001892688.1 CDS Rpic_4162 NC_010678.1 429339 429632 D KEGG: rso:RSc2198 hypothetical protein; hypothetical protein 429339..429632 Ralstonia pickettii 12J 6285577 YP_001892689.1 CDS Rpic_4163 NC_010678.1 430017 431339 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS03167 probable high affinity nitrate transporter transmembrane protein; major facilitator superfamily protein 430017..431339 Ralstonia pickettii 12J 6285578 YP_001892690.1 CDS Rpic_4164 NC_010678.1 431354 433909 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rso:RSp1222 probable nitrite reductase NADPH (large subunit) oxidoreductase protein; nitrite reductase (NAD(P)H) large subunit 431354..433909 Ralstonia pickettii 12J 6285579 YP_001892691.1 CDS Rpic_4165 NC_010678.1 433936 434274 D TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: rso:RSp1221 probable nitrite reductase NADPH (small subunit) oxidoreductase protein; nitrite reductase (NAD(P)H) small subunit 433936..434274 Ralstonia pickettii 12J 6285582 YP_001892692.1 CDS Rpic_4166 NC_010678.1 434314 435546 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RS03164 probable flavoprotein FAD oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 434314..435546 Ralstonia pickettii 12J 6285585 YP_001892693.1 CDS Rpic_4167 NC_010678.1 435846 438593 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rso:RSp1219 probable nitrate reductase large subunit oxidoreductase protein; nitrate reductase 435846..438593 Ralstonia pickettii 12J 6285588 YP_001892694.1 CDS Rpic_4168 NC_010678.1 438704 439318 D KEGG: rso:RS03158 hypothetical protein; hypothetical protein 438704..439318 Ralstonia pickettii 12J 6285590 YP_001892695.1 CDS Rpic_4169 NC_010678.1 439315 440682 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rso:RS03157 probable transmembrane protein; MATE efflux family protein 439315..440682 Ralstonia pickettii 12J 6285591 YP_001892696.1 CDS Rpic_4170 NC_010678.1 440739 442001 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr5045 inner membrane protein; major facilitator superfamily protein complement(440739..442001) Ralstonia pickettii 12J 6285592 YP_001892697.1 CDS cls NC_010678.1 442094 443527 R catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase complement(442094..443527) Ralstonia pickettii 12J 6285595 YP_001892698.1 CDS Rpic_4172 NC_010678.1 443713 445407 D PFAM: phospholipase D/Transphosphatidylase; KEGG: pol:Bpro_4230 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 443713..445407 Ralstonia pickettii 12J 6285596 YP_001892699.1 CDS Rpic_4173 NC_010678.1 445484 445624 R PFAM: Entericidin EcnAB; KEGG: rso:RS03154 probable lipoprotein transmembrane; entericidin EcnAB complement(445484..445624) Ralstonia pickettii 12J 6285597 YP_001892700.1 CDS Rpic_4174 NC_010678.1 445916 447484 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rso:RS03153 methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer 445916..447484 Ralstonia pickettii 12J 6285598 YP_001892701.1 CDS Rpic_4175 NC_010678.1 447541 448956 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rso:RS03152 hypothetical protein; diguanylate cyclase/phosphodiesterase complement(447541..448956) Ralstonia pickettii 12J 6285600 YP_001892702.1 CDS Rpic_4176 NC_010678.1 449181 450086 R PFAM: type IV pilus assembly PilZ; KEGG: rso:RS03149 hypothetical protein; type IV pilus assembly PilZ complement(449181..450086) Ralstonia pickettii 12J 6285602 YP_001892703.1 CDS Rpic_4177 NC_010678.1 450206 450718 D PFAM: GtrA family protein; KEGG: rme:Rmet_5967 GtrA-like protein; GtrA family protein 450206..450718 Ralstonia pickettii 12J 6285603 YP_001892704.1 CDS Rpic_4178 NC_010678.1 450735 451217 R KEGG: rso:RS03148 hypothetical protein; hypothetical protein complement(450735..451217) Ralstonia pickettii 12J 6285604 YP_001892705.1 CDS Rpic_4179 NC_010678.1 451870 453210 D KEGG: rso:RS03147 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 451870..453210 Ralstonia pickettii 12J 6285605 YP_001892706.1 CDS Rpic_4180 NC_010678.1 453289 453852 R KEGG: rso:RS03145 probable signal peptide protein; signal peptide protein complement(453289..453852) Ralstonia pickettii 12J 6285606 YP_001892707.1 CDS Rpic_4181 NC_010678.1 454153 455658 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS03144 outer membrane channel lipoprotein transmembrane; NodT family RND efflux system outer membrane lipoprotein complement(454153..455658) Ralstonia pickettii 12J 6285609 YP_001892708.1 CDS Rpic_4182 NC_010678.1 455661 458762 R PFAM: acriflavin resistance protein; KEGG: rso:RS03143 probable drug efflux transmembrane protein; acriflavin resistance protein complement(455661..458762) Ralstonia pickettii 12J 6285610 YP_001892709.1 CDS Rpic_4183 NC_010678.1 458759 461893 R PFAM: acriflavin resistance protein; KEGG: rso:RS03142 probable drug efflux PUMP transmembrane protein; acriflavin resistance protein complement(458759..461893) Ralstonia pickettii 12J 6285611 YP_001892710.1 CDS Rpic_4184 NC_010678.1 461951 463339 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS03141 resistance transmembrane protein; RND family efflux transporter MFP subunit complement(461951..463339) Ralstonia pickettii 12J 6285612 YP_001892711.1 CDS Rpic_4185 NC_010678.1 463593 464324 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS03140 probable two component response regulator transcription regulator protein; transcriptional regulator 463593..464324 Ralstonia pickettii 12J 6285614 YP_001892712.1 CDS Rpic_4186 NC_010678.1 464308 465594 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RS03139 probable two component transmembrane sensor kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase 464308..465594 Ralstonia pickettii 12J 6285616 YP_001892713.1 CDS Rpic_4187 NC_010678.1 465701 466138 D PFAM: protein of unknown function DUF333; KEGG: rso:RS03138 probable proline rich transmembrane protein; hypothetical protein 465701..466138 Ralstonia pickettii 12J 6285618 YP_001892714.1 CDS Rpic_4189 NC_010678.1 467180 467986 D PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 transposase IS4; transposase IS4 family protein 467180..467986 Ralstonia pickettii 12J 6285910 YP_001892715.1 CDS ribB NC_010678.1 469423 470148 D DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 469423..470148 Ralstonia pickettii 12J 6284924 YP_001892716.1 CDS Rpic_4192 NC_010678.1 470183 470809 R catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase complement(470183..470809) Ralstonia pickettii 12J 6285622 YP_001892717.1 CDS Rpic_4193 NC_010678.1 470844 472196 R TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: rso:RSp1189 probable high-affinity gluconate transporter (GNT-III system) transmembrane protein; gluconate transporter complement(470844..472196) Ralstonia pickettii 12J 6285623 YP_001892718.1 CDS Rpic_4194 NC_010678.1 472277 472663 R PFAM: Endoribonuclease L-PSP; KEGG: rso:RS03132 hypothetical protein; endoribonuclease L-PSP complement(472277..472663) Ralstonia pickettii 12J 6285624 YP_001892719.1 CDS Rpic_4195 NC_010678.1 472705 474189 R PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: rso:RSp1187 probable N-acyl-D-glutamate deacylase protein; N-acyl-D-amino-acid deacylase complement(472705..474189) Ralstonia pickettii 12J 6285625 YP_001892720.1 CDS Rpic_4196 NC_010678.1 474191 475084 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rso:RS03130 hypothetical protein; RpiR family transcriptional regulator complement(474191..475084) Ralstonia pickettii 12J 6285626 YP_001892721.1 CDS Rpic_4197 NC_010678.1 475223 476500 D KEGG: rso:RSp1185 probable D-serine deaminase (D-serine dehydratase) protein; D-serine deaminase 475223..476500 Ralstonia pickettii 12J 6285628 YP_001892722.1 CDS Rpic_4198 NC_010678.1 476513 477439 D PFAM: PfkB domain protein; KEGG: rso:RS05074 fructokinase-like protein (sugar kinase); PfkB domain-containing protein 476513..477439 Ralstonia pickettii 12J 6285629 YP_001892723.1 CDS Rpic_4199 NC_010678.1 477767 480196 R PFAM: peptidase S45 penicillin amidase; KEGG: vei:Veis_3277 penicillin amidase; peptidase S45 penicillin amidase complement(477767..480196) Ralstonia pickettii 12J 6285630 YP_001892724.1 CDS Rpic_4200 NC_010678.1 480464 482500 R KEGG: rso:RS05068 probable composite two-component transcriptional regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; multi-sensor hybrid histidine kinase complement(480464..482500) Ralstonia pickettii 12J 6285631 YP_001892725.1 CDS Rpic_4201 NC_010678.1 482652 483950 R PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rso:RS05067 probable transmembrane protein; major facilitator superfamily protein complement(482652..483950) Ralstonia pickettii 12J 6285632 YP_001892726.1 CDS Rpic_4202 NC_010678.1 484103 484459 D KEGG: reu:Reut_B4511 hypothetical protein; hypothetical protein 484103..484459 Ralstonia pickettii 12J 6285633 YP_001892727.1 CDS Rpic_4203 NC_010678.1 484478 484756 R KEGG: rso:RS05066 hypothetical protein; hypothetical protein complement(484478..484756) Ralstonia pickettii 12J 6285634 YP_001892728.1 CDS Rpic_4204 NC_010678.1 485110 485358 D PFAM: protein of unknown function DUF1458; KEGG: rso:RS05065 hypothetical protein; hypothetical protein 485110..485358 Ralstonia pickettii 12J 6285635 YP_001892729.1 CDS Rpic_4205 NC_010678.1 485424 487586 R TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: rso:RSp1174 acid phosphatase protein; acid phosphatase complement(485424..487586) Ralstonia pickettii 12J 6285636 YP_001892730.1 CDS Rpic_4206 NC_010678.1 487861 489252 D PFAM: Di-haem cytochrome c peroxidase; KEGG: rso:RS05063 probable lipoprotein transmembrane; di-heme cytochrome c peroxidase 487861..489252 Ralstonia pickettii 12J 6285637 YP_001892731.1 CDS Rpic_4207 NC_010678.1 489376 490956 D PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: rso:RS05062 probable transmembrane protein; integral membrane protein TerC 489376..490956 Ralstonia pickettii 12J 6285638 YP_001892732.1 CDS Rpic_4208 NC_010678.1 490953 491870 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rme:Rmet_0006 protein of unknown function DUF6, transmembrane; hypothetical protein complement(490953..491870) Ralstonia pickettii 12J 6285639 YP_001892733.1 CDS Rpic_4209 NC_010678.1 491963 492790 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: rle:RL3396 AraC family transcriptional regulator; AraC family transcriptional regulator complement(491963..492790) Ralstonia pickettii 12J 6285642 YP_001892734.1 CDS Rpic_4210 NC_010678.1 493003 494559 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RS05645 probable two-component sensor histidine kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase 493003..494559 Ralstonia pickettii 12J 6285645 YP_001892735.1 CDS Rpic_4211 NC_010678.1 494543 495202 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS05646 probable two-component response regulator transcription regulator protein; transcriptional regulator 494543..495202 Ralstonia pickettii 12J 6285646 YP_001892736.1 CDS Rpic_4212 NC_010678.1 495308 495880 D KEGG: rso:RS05425 probable lipoprotein signal peptide; lipoprotein signal peptide 495308..495880 Ralstonia pickettii 12J 6285648 YP_001892737.1 CDS Rpic_4213 NC_010678.1 495942 496382 R PFAM: UspA domain protein; KEGG: rso:RS05426 hypothetical protein; UspA domain-containing protein complement(495942..496382) Ralstonia pickettii 12J 6285651 YP_001892738.1 CDS Rpic_4214 NC_010678.1 496537 497454 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS05428 probable transcription regulator protein; AraC family transcriptional regulator complement(496537..497454) Ralstonia pickettii 12J 6285654 YP_001892739.1 CDS Rpic_4215 NC_010678.1 497507 497938 R KEGG: rso:RS05430 probable signal peptide protein; signal peptide protein complement(497507..497938) Ralstonia pickettii 12J 6285658 YP_001892740.1 CDS Rpic_4216 NC_010678.1 497935 498297 R KEGG: rha:RHA1_ro00675 possible glycoprotein; glycoprotein complement(497935..498297) Ralstonia pickettii 12J 6285664 YP_001892741.1 CDS Rpic_4217 NC_010678.1 499011 501761 D KEGG: rso:RS05432 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 499011..501761 Ralstonia pickettii 12J 6285665 YP_001892742.1 CDS Rpic_4218 NC_010678.1 501885 502388 D KEGG: rso:RS05433 probable transmembrane protein; hypothetical protein 501885..502388 Ralstonia pickettii 12J 6285666 YP_001892743.1 CDS Rpic_4219 NC_010678.1 502447 503259 D TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: rso:RS05434 molybdenum-pterin-binding protein; ModE family transcriptional regulator 502447..503259 Ralstonia pickettii 12J 6285667 YP_001892744.1 CDS Rpic_4220 NC_010678.1 503267 503764 D PFAM: flavodoxin/nitric oxide synthase; KEGG: ajs:Ajs_1688 NAD(P)H dehydrogenase (quinone); flavodoxin/nitric oxide synthase 503267..503764 Ralstonia pickettii 12J 6285669 YP_001892745.1 CDS Rpic_4221 NC_010678.1 503767 504510 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RS05462 probable ATP-binding ABC transporter protein; ABC transporter complement(503767..504510) Ralstonia pickettii 12J 6285670 YP_001892746.1 CDS Rpic_4222 NC_010678.1 504507 505193 R TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RS05467 probable transmembrane protein; molybdate ABC transporter inner membrane subunit complement(504507..505193) Ralstonia pickettii 12J 6285671 YP_001892747.1 CDS Rpic_4223 NC_010678.1 505450 506982 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS05506 outer-membrane drug efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(505450..506982) Ralstonia pickettii 12J 6285672 YP_001892748.1 CDS Rpic_4224 NC_010678.1 507044 510250 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rso:RSp1113 probable transmembrane multidrug-efflux system lipoprotein transmembrane; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(507044..510250) Ralstonia pickettii 12J 6285676 YP_001892749.1 CDS Rpic_4225 NC_010678.1 510280 511590 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSp1112 probable transmembrane multidrug efflux system transmembrane protein; RND family efflux transporter MFP subunit complement(510280..511590) Ralstonia pickettii 12J 6285677 YP_001892750.1 CDS Rpic_4226 NC_010678.1 511706 512797 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rso:RS02619 probable lipase protein; Alpha/beta hydrolase fold-3 domain-containing protein complement(511706..512797) Ralstonia pickettii 12J 6285678 YP_001892751.1 CDS Rpic_4227 NC_010678.1 513138 514082 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS02618 probable transcription regulator protein; LysR family transcriptional regulator 513138..514082 Ralstonia pickettii 12J 6285679 YP_001892752.1 CDS Rpic_4228 NC_010678.1 514180 514437 D KEGG: rso:RSc0320 hypothetical protein; hypothetical protein 514180..514437 Ralstonia pickettii 12J 6285680 YP_001892753.1 CDS Rpic_4229 NC_010678.1 514586 515362 D PFAM: protein of unknown function DUF82; KEGG: rso:RS02617 hypothetical protein; hypothetical protein 514586..515362 Ralstonia pickettii 12J 6285684 YP_001892754.1 CDS Rpic_4230 NC_010678.1 515363 516793 R KEGG: rso:RSp1105 probable alpha,alpha-trehalose-phosphate synthase protein; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase (UDP-forming) complement(515363..516793) Ralstonia pickettii 12J 6285686 YP_001892755.1 CDS Rpic_4231 NC_010678.1 516790 517590 R KEGG: rso:RSp1104 probable trehalose-phosphatase protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD-superfamily hydrolase complement(516790..517590) Ralstonia pickettii 12J 6285687 YP_001892756.1 CDS Rpic_4232 NC_010678.1 517752 519803 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bte:BTH_II0478 2,4-dienoyl-CoA reductase; NADH:flavin oxidoreductase complement(517752..519803) Ralstonia pickettii 12J 6285688 YP_001892757.1 CDS Rpic_4233 NC_010678.1 519911 520117 R KEGG: rso:RS02609 hypothetical protein; hypothetical protein complement(519911..520117) Ralstonia pickettii 12J 6285690 YP_001892758.1 CDS Rpic_4234 NC_010678.1 520204 521184 D PFAM: integrase family protein; KEGG: rso:RS02608 probable integrase/recombinase protein; integrase family protein 520204..521184 Ralstonia pickettii 12J 6285693 YP_001892759.1 CDS Rpic_4235 NC_010678.1 521352 522377 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: rso:RSp1101 probable UDP-glucose 4-epimerase protein; UDP-glucose 4-epimerase 521352..522377 Ralstonia pickettii 12J 6285695 YP_001892760.1 CDS Rpic_4236 NC_010678.1 522416 523843 D TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: rso:RS02606 lipoprotein transmembrane; PAS/PAC sensor protein 522416..523843 Ralstonia pickettii 12J 6285696 YP_001892761.1 CDS Rpic_4237 NC_010678.1 524024 525565 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: rso:RS02605 methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer 524024..525565 Ralstonia pickettii 12J 6285697 YP_001892762.1 CDS Rpic_4238 NC_010678.1 525686 525994 R PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: rso:RS02604 HNS-like transcription regulator protein; histone family protein nucleoid-structuring protein H-NS complement(525686..525994) Ralstonia pickettii 12J 6285699 YP_001892763.1 CDS Rpic_4239 NC_010678.1 526408 528495 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rso:RS02603 probable transmembrane protein; diguanylate cyclase/phosphodiesterase complement(526408..528495) Ralstonia pickettii 12J 6285700 YP_001892764.1 CDS Rpic_4240 NC_010678.1 528800 530053 R PFAM: regulatory protein LuxR; KEGG: rso:RS02602 transcription regulator protein; LuxR family transcrptional regulator complement(528800..530053) Ralstonia pickettii 12J 6285701 YP_001892765.1 CDS Rpic_4241 NC_010678.1 530185 531930 R PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: rso:RS02601 probable activation/secretion signal peptide protein; polypeptide-transport-associated domain-containing protein complement(530185..531930) Ralstonia pickettii 12J 6285708 YP_001892766.1 CDS Rpic_4242 NC_010678.1 532137 533612 R KEGG: rso:RS02600 hemagglutinin-related transmembrane protein; hemagglutinin-related transmembrane protein complement(532137..533612) Ralstonia pickettii 12J 6285709 YP_001892767.1 CDS Rpic_4243 NC_010678.1 534101 535225 D KEGG: rso:RS02599 hemagglutinin-related transmembrane protein; hemagglutinin-related transmembrane protein 534101..535225 Ralstonia pickettii 12J 6285712 YP_001892768.1 CDS Rpic_4244 NC_010678.1 535791 535970 D PFAM: Flp/Fap pilin component; KEGG: rso:RS02598 pilin protein; Flp/Fap pilin component 535791..535970 Ralstonia pickettii 12J 6285716 YP_001892769.1 CDS Rpic_4245 NC_010678.1 535980 536531 D PFAM: peptidase A24A prepilin type IV; KEGG: rso:RSp1091 probable prepilin peptidase transmembrane protein; peptidase A24A prepilin type IV 535980..536531 Ralstonia pickettii 12J 6285726 YP_001892770.1 CDS Rpic_4246 NC_010678.1 536596 537099 D PFAM: TadE family protein; KEGG: rso:RS02595 hypothetical protein; TadE family protein 536596..537099 Ralstonia pickettii 12J 6285729 YP_001892771.1 CDS Rpic_4247 NC_010678.1 537152 538075 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RS02596 probable signal peptide protein; Flp pilus assembly protein CpaB 537152..538075 Ralstonia pickettii 12J 6285732 YP_001892772.1 CDS Rpic_4248 NC_010678.1 538068 539432 D PFAM: type II and III secretion system protein; KEGG: rso:RS02594 probable outer membrane channel signal peptide protein; type II and III secretion system protein 538068..539432 Ralstonia pickettii 12J 6285733 YP_001892773.1 CDS Rpic_4249 NC_010678.1 539442 540785 D KEGG: rso:RSp1086 probable pilus assembly protein; pilus assembly protein 539442..540785 Ralstonia pickettii 12J 6285734 YP_001892774.1 CDS Rpic_4250 NC_010678.1 540782 542137 D PFAM: type II secretion system protein E; KEGG: rso:RSp1085 probable secretion ATPase protein; type II secretion system protein E 540782..542137 Ralstonia pickettii 12J 6285736 YP_001892775.1 CDS Rpic_4251 NC_010678.1 542130 543056 D PFAM: type II secretion system protein; KEGG: rso:RS02591 probable pilus assembly transmembrane protein; type II secretion system protein 542130..543056 Ralstonia pickettii 12J 6285737 YP_001892776.1 CDS Rpic_4252 NC_010678.1 543066 544055 D PFAM: type II secretion system protein; KEGG: rso:RS02590 tight adherence TadC related transmembrane protein; type II secretion system protein 543066..544055 Ralstonia pickettii 12J 6285738 YP_001892777.1 CDS Rpic_4253 NC_010678.1 544057 544980 D PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rso:RS02589 probable lipoprotein transmembrane; hypothetical protein 544057..544980 Ralstonia pickettii 12J 6285741 YP_001892778.1 CDS Rpic_4254 NC_010678.1 544977 545306 D KEGG: rso:RS02588 probable signal peptide protein; signal peptide protein 544977..545306 Ralstonia pickettii 12J 6285742 YP_001892779.1 CDS Rpic_4255 NC_010678.1 545398 547056 D KEGG: rso:RS02587 probable transmembrane protein; hypothetical protein 545398..547056 Ralstonia pickettii 12J 6285744 YP_001892780.1 CDS Rpic_4256 NC_010678.1 547072 548487 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS02586 probable sigma-54 interacting transcription regulator protein; Fis family transcriptional regulator 547072..548487 Ralstonia pickettii 12J 6285745 YP_001892781.1 CDS Rpic_4257 NC_010678.1 548594 549376 D KEGG: rso:RS02585 lipoprotein; lipoprotein 548594..549376 Ralstonia pickettii 12J 6285746 YP_001892782.1 CDS Rpic_4258 NC_010678.1 549527 552766 D PFAM: cytochrome P450; oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: rme:Rmet_3467 cytochrome P450; cytochrome P450 549527..552766 Ralstonia pickettii 12J 6285748 YP_001892783.1 CDS Rpic_4259 NC_010678.1 552935 553225 D KEGG: rso:RS02582 probable transmembrane protein; hypothetical protein 552935..553225 Ralstonia pickettii 12J 6285749 YP_001892784.1 CDS Rpic_4260 NC_010678.1 553278 554432 R PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: rso:RS02580 glucose-fructose oxidoreductase oxidoreductase protein; oxidoreductase domain-containing protein complement(553278..554432) Ralstonia pickettii 12J 6285751 YP_001892785.1 CDS Rpic_4261 NC_010678.1 554585 554929 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: reu:Reut_B5114 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(554585..554929) Ralstonia pickettii 12J 6285752 YP_001892786.1 CDS Rpic_4262 NC_010678.1 554978 556117 R KEGG: bmu:Bmul_3696 cytochrome P450-like protein; cytochrome P450-like protein complement(554978..556117) Ralstonia pickettii 12J 6285753 YP_001892787.1 CDS Rpic_4263 NC_010678.1 556206 556922 D PFAM: regulatory protein ArsR; KEGG: pol:Bpro_2808 ArsR family transcriptional regulator; ArsR family transcriptional regulator 556206..556922 Ralstonia pickettii 12J 6285754 YP_001892788.1 CDS Rpic_4264 NC_010678.1 556939 557481 R PFAM: GCN5-related N-acetyltransferase; KEGG: bmu:Bmul_3149 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(556939..557481) Ralstonia pickettii 12J 6285755 YP_001892789.1 CDS Rpic_4265 NC_010678.1 557537 558679 R PFAM: PepSY-associated TM helix domain protein; KEGG: pap:PSPA7_5127 probable oxidoreductase; PepSY-associated TM helix domain-containing protein complement(557537..558679) Ralstonia pickettii 12J 6285756 YP_001892790.1 CDS Rpic_4266 NC_010678.1 558710 560830 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS02469 probable ferrisiderophore receptor protein; TonB-dependent siderophore receptor complement(558710..560830) Ralstonia pickettii 12J 6285757 YP_001892791.1 CDS Rpic_4267 NC_010678.1 561096 562172 D PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: rso:RS02398 probable oxidoreductase protein; oxidoreductase domain-containing protein 561096..562172 Ralstonia pickettii 12J 6285760 YP_001892792.1 CDS Rpic_4268 NC_010678.1 562169 564280 D PFAM: sodium/hydrogen exchanger; KEGG: reu:Reut_B3954 sodium/hydrogen exchanger; sodium/hydrogen exchanger 562169..564280 Ralstonia pickettii 12J 6285761 YP_001892793.1 CDS Rpic_4269 NC_010678.1 564308 565570 R PFAM: Patatin; KEGG: rso:RS02397 transmembrane protein; patatin complement(564308..565570) Ralstonia pickettii 12J 6285763 YP_001892794.1 CDS Rpic_4270 NC_010678.1 565602 566387 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(565602..566387) Ralstonia pickettii 12J 6285764 YP_001892795.1 CDS Rpic_4271 NC_010678.1 566441 567184 R converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase complement(566441..567184) Ralstonia pickettii 12J 6285765 YP_001892796.1 CDS Rpic_4272 NC_010678.1 567377 568780 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rso:RS02394 transcription regulator protein; GntR family transcriptional regulator complement(567377..568780) Ralstonia pickettii 12J 6285766 YP_001892797.1 CDS Rpic_4273 NC_010678.1 568936 570273 D catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 568936..570273 Ralstonia pickettii 12J 6285771 YP_001892798.1 CDS Rpic_4274 NC_010678.1 570275 571798 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RS02392 probable transmembrane aldehyde dehydrogenase oxidoreductase protein; methylmalonate-semialdehyde dehydrogenase 570275..571798 Ralstonia pickettii 12J 6285772 YP_001892799.1 CDS Rpic_4275 NC_010678.1 571875 572081 R KEGG: rso:RS02391 hypothetical protein; cold-shock protein complement(571875..572081) Ralstonia pickettii 12J 6285773 YP_001892800.1 CDS Rpic_4276 NC_010678.1 572259 572462 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: tbd:Tbd_0855 possible cold-shock DNA-binding domain protein; cold-shock protein complement(572259..572462) Ralstonia pickettii 12J 6285774 YP_001892801.1 CDS Rpic_4277 NC_010678.1 572814 574709 D PFAM: K potassium transporter; KEGG: rso:RSp1052 probable potassium uptake transmembrane protein; K potassium transporter 572814..574709 Ralstonia pickettii 12J 6285775 YP_001892802.1 CDS Rpic_4278 NC_010678.1 574728 575543 R TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: rso:RSp1050 probable formate dehydrogenase associated protein (FdhD protein); formate dehydrogenase family accessory protein FdhD complement(574728..575543) Ralstonia pickettii 12J 6285777 YP_001892803.1 CDS Rpic_4279 NC_010678.1 575540 575785 R KEGG: rso:RS02386 hypothetical protein; hypothetical protein complement(575540..575785) Ralstonia pickettii 12J 6285779 YP_001892804.1 CDS Rpic_4280 NC_010678.1 575785 578124 R TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rso:RS02045 formate dehydrogenase oxidoreductase protein; oxidoreductase molybdopterin subunit complement(575785..578124) Ralstonia pickettii 12J 6285780 YP_001892805.1 CDS Rpic_4281 NC_010678.1 578153 579880 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS02384 probable transporter transmembrane protein; major facilitator superfamily protein complement(578153..579880) Ralstonia pickettii 12J 6285784 YP_001892806.1 CDS Rpic_4282 NC_010678.1 580089 580568 R PFAM: Hpt domain protein; KEGG: rso:RS02382 hypothetical protein; Hpt protein complement(580089..580568) Ralstonia pickettii 12J 6285786 YP_001892807.1 CDS Rpic_4283 NC_010678.1 580661 583756 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pnu:Pnuc_1300 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux pump complement(580661..583756) Ralstonia pickettii 12J 6285790 YP_001892808.1 CDS Rpic_4284 NC_010678.1 583759 584907 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pnu:Pnuc_1301 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(583759..584907) Ralstonia pickettii 12J 6285793 YP_001892809.1 CDS Rpic_4285 NC_010678.1 584912 586282 R PFAM: outer membrane efflux protein; KEGG: pnu:Pnuc_1302 outer membrane efflux protein; outer membrane efflux protein complement(584912..586282) Ralstonia pickettii 12J 6285799 YP_001892810.1 CDS Rpic_4286 NC_010678.1 586440 586841 R PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pfo:Pfl_0677 possible MerR family transcriptional regulator; MerR family transcriptional regulator complement(586440..586841) Ralstonia pickettii 12J 6285801 YP_001892811.1 CDS Rpic_4287 NC_010678.1 586943 587365 D KEGG: pfo:Pfl_0678 hypothetical protein; hypothetical protein 586943..587365 Ralstonia pickettii 12J 6285802 YP_001892812.1 CDS Rpic_4288 NC_010678.1 587379 587795 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: rso:RS02375 probable lipoprotein transmembrane; transport-associated complement(587379..587795) Ralstonia pickettii 12J 6285809 YP_001892813.1 CDS Rpic_4289 NC_010678.1 587857 588327 R PFAM: DoxX family protein; KEGG: rso:RS02374 probable transmembrane protein; DoxX family protein complement(587857..588327) Ralstonia pickettii 12J 6285810 YP_001892814.1 CDS Rpic_4290 NC_010678.1 588324 589082 R KEGG: rso:RS02373 hypothetical protein; hypothetical protein complement(588324..589082) Ralstonia pickettii 12J 6285811 YP_001892815.1 CDS Rpic_4291 NC_010678.1 589069 589935 R PFAM: protein of unknown function DUF692; KEGG: rso:RS02372 hypothetical protein; hypothetical protein complement(589069..589935) Ralstonia pickettii 12J 6285813 YP_001892816.1 CDS Rpic_4292 NC_010678.1 589957 590223 R KEGG: rso:RS02371 probable signal peptide protein; signal peptide protein complement(589957..590223) Ralstonia pickettii 12J 6285815 YP_001892817.1 CDS Rpic_4293 NC_010678.1 590452 590976 R KEGG: bmu:Bmul_1707 hypothetical protein; hypothetical protein complement(590452..590976) Ralstonia pickettii 12J 6285818 YP_001892818.1 CDS Rpic_4294 NC_010678.1 591097 591366 R KEGG: rso:RS02370 hypothetical protein; hypothetical protein complement(591097..591366) Ralstonia pickettii 12J 6285819 YP_001892819.1 CDS Rpic_4295 NC_010678.1 591525 592466 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mlo:mlr3911 hypothetical protein; hypothetical protein complement(591525..592466) Ralstonia pickettii 12J 6285820 YP_001892820.1 CDS Rpic_4296 NC_010678.1 592562 593014 D PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll3910 transcriptional regulator; AsnC family transcriptional regulator 592562..593014 Ralstonia pickettii 12J 6285821 YP_001892821.1 CDS Rpic_4298 NC_010678.1 594314 594790 D PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll7935 transcriptional regulator; AsnC family transcriptional regulator 594314..594790 Ralstonia pickettii 12J 6285528 YP_001892822.1 CDS Rpic_4299 NC_010678.1 594934 596664 D KEGG: rso:RSp0274 probable gamma-glutamyltranspeptidase signal peptide protein; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 594934..596664 Ralstonia pickettii 12J 6285832 YP_001892823.1 CDS Rpic_4300 NC_010678.1 596741 597814 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B2773 4-hydroxyphenylpyruvate dioxygenase (Hpd); 4-hydroxyphenylpyruvate dioxygenase complement(596741..597814) Ralstonia pickettii 12J 6285839 YP_001892824.1 CDS Rpic_4301 NC_010678.1 597896 599086 R PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5897 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(597896..599086) Ralstonia pickettii 12J 6285840 YP_001892825.1 CDS Rpic_4302 NC_010678.1 599091 599924 R PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: dac:Daci_4437 shikimate dehydrogenase substrate binding domain protein; shikimate dehydrogenase complement(599091..599924) Ralstonia pickettii 12J 6285842 YP_001892826.1 CDS Rpic_4303 NC_010678.1 599944 601329 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: dac:Daci_4438 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(599944..601329) Ralstonia pickettii 12J 6285845 YP_001892827.1 CDS Rpic_4304 NC_010678.1 601561 602328 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reu:Reut_B5034 regulatory protein, IclR; IclR family transcriptional regulator complement(601561..602328) Ralstonia pickettii 12J 6285846 YP_001892828.1 CDS Rpic_4305 NC_010678.1 602459 604345 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: reu:Reut_B5035 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 602459..604345 Ralstonia pickettii 12J 6285847 YP_001892829.1 CDS Rpic_4306 NC_010678.1 604467 605531 D PFAM: porin Gram-negative type; KEGG: reu:Reut_B5031 porin, gram-negative type; porin 604467..605531 Ralstonia pickettii 12J 6285853 YP_001892830.1 CDS Rpic_4307 NC_010678.1 605599 606852 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(605599..606852) Ralstonia pickettii 12J 6285858 YP_001892831.1 CDS Rpic_4308 NC_010678.1 607168 607959 R catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit complement(607168..607959) Ralstonia pickettii 12J 6285859 YP_001892832.1 CDS Rpic_4309 NC_010678.1 607980 609362 R PFAM: Ethanolamine ammonia lyase large subunit; KEGG: reh:H16_B0096 ethanolamine ammonia-lyase heavy chain; Ethanolamine ammonia lyase large subunit complement(607980..609362) Ralstonia pickettii 12J 6285862 YP_001892833.1 CDS Rpic_4310 NC_010678.1 609487 610722 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bxe:Bxe_B0092 chromate transporter; chromate ion transporter family chromate transporter 609487..610722 Ralstonia pickettii 12J 6285863 YP_001892834.1 CDS Rpic_4311 NC_010678.1 610773 612170 R exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA complement(610773..612170) Ralstonia pickettii 12J 6285868 YP_001892835.1 CDS Rpic_4312 NC_010678.1 612185 612505 R KEGG: bam:Bamb_5099 hypothetical protein; hypothetical protein complement(612185..612505) Ralstonia pickettii 12J 6285869 YP_001892836.1 CDS Rpic_4313 NC_010678.1 612968 614716 D PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: eba:ebA5073 poly-beta-hydroxyalkanoate synthase; poly-beta-hydroxybutyrate polymerase domain-containing protein 612968..614716 Ralstonia pickettii 12J 6285873 YP_001892837.1 CDS Rpic_4315 NC_010678.1 614881 615393 D KEGG: eba:ebA5072 hypothetical protein; hypothetical protein 614881..615393 Ralstonia pickettii 12J 6285914 YP_001892838.1 CDS Rpic_4316 NC_010678.1 615403 616848 D PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: har:HEAR1516 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 615403..616848 Ralstonia pickettii 12J 6285880 YP_001892839.1 CDS Rpic_4317 NC_010678.1 616845 618026 D KEGG: pla:Plav_3453 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 616845..618026 Ralstonia pickettii 12J 6285881 YP_001892840.1 CDS Rpic_4318 NC_010678.1 618456 619955 D TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bur:Bcep18194_C6772 succinic semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase 618456..619955 Ralstonia pickettii 12J 6285883 YP_001892841.1 CDS Rpic_4319 NC_010678.1 619991 621160 D PFAM: iron-containing alcohol dehydrogenase; KEGG: bur:Bcep18194_C6773 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 619991..621160 Ralstonia pickettii 12J 6285887 YP_001892842.1 CDS Rpic_4320 NC_010678.1 621357 622820 D KEGG: bur:Bcep18194_C6774 flavin-containing monooxygenase FMO; flavin-containing monooxygenase FMO 621357..622820 Ralstonia pickettii 12J 6285890 YP_001892843.1 CDS Rpic_4321 NC_010678.1 622834 623811 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_C6775 esterase/lipase/thioesterase; Alpha/beta hydrolase fold-3 domain-containing protein 622834..623811 Ralstonia pickettii 12J 6285891 YP_001892844.1 CDS Rpic_4322 NC_010678.1 624474 624887 D PFAM: Endoribonuclease L-PSP; KEGG: bch:Bcen2424_5817 endoribonuclease L-PSP; endoribonuclease L-PSP 624474..624887 Ralstonia pickettii 12J 6285892 YP_001892845.1 CDS Rpic_4323 NC_010678.1 624947 626311 D PFAM: protein of unknown function DUF1329; KEGG: reu:Reut_C6388 protein of unknown function DUF1329; hypothetical protein 624947..626311 Ralstonia pickettii 12J 6285893 YP_001892846.1 CDS Rpic_4324 NC_010678.1 626386 628221 D PFAM: protein of unknown function DUF1302; KEGG: reu:Reut_C6389 protein of unknown function DUF1302; hypothetical protein 626386..628221 Ralstonia pickettii 12J 6285900 YP_001892847.1 CDS Rpic_4325 NC_010678.1 628285 630645 D KEGG: reu:Reut_C6390 transporter; transporter 628285..630645 Ralstonia pickettii 12J 6285901 YP_001892848.1 CDS Rpic_4326 NC_010678.1 630659 631630 D KEGG: reu:Reut_C6391 glycosyl hydrolase, BNR repeat; glycosyl hydrolase 630659..631630 Ralstonia pickettii 12J 6285902 YP_001892849.1 CDS Rpic_4327 NC_010678.1 631717 632547 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: reu:Reut_B5715 phytanoyl-CoA dioxygenase; Phytanoyl-CoA dioxygenase 631717..632547 Ralstonia pickettii 12J 6285903 YP_001892850.1 CDS Rpic_4328 NC_010678.1 632726 634159 R PFAM: regulatory protein TetR; KEGG: reu:Reut_C6386 regulatory protein, TetR; TetR family transcriptional regulator complement(632726..634159) Ralstonia pickettii 12J 6285904 YP_001892851.1 CDS Rpic_4329 NC_010678.1 634876 636237 D PFAM: FAD dependent oxidoreductase; KEGG: reu:Reut_C6399 twin-arginine translocation pathway signal; FAD dependent oxidoreductase 634876..636237 Ralstonia pickettii 12J 6285906 YP_001892852.1 CDS Rpic_4330 NC_010678.1 636324 637202 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: bur:Bcep18194_C6790 phytanoyl-CoA dioxygenase; Phytanoyl-CoA dioxygenase 636324..637202 Ralstonia pickettii 12J 6285907 YP_001892853.1 CDS Rpic_4331 NC_010678.1 637396 638892 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: reh:H16_A0831 monoamine oxidase (flavin containing); Amine oxidase (flavin-containing) 637396..638892 Ralstonia pickettii 12J 6285908 YP_001892854.1 CDS Rpic_4332 NC_010678.1 638892 639158 D KEGG: bch:Bcen2424_5824 cytochrome c, class I; hypothetical protein 638892..639158 Ralstonia pickettii 12J 6285909 YP_001892855.1 CDS Rpic_4333 NC_010678.1 639276 642275 D PFAM: transposase Tn3 family protein; KEGG: bvi:Bcep1808_7171 transposase Tn3 family protein; transposase Tn3 family protein 639276..642275 Ralstonia pickettii 12J 6285911 YP_001892856.1 CDS Rpic_4334 NC_010678.1 642268 642603 D KEGG: bvi:Bcep1808_7205 TnpC; TnpC protein 642268..642603 Ralstonia pickettii 12J 6285915 YP_001892857.1 CDS Rpic_4335 NC_010678.1 642769 643962 R PFAM: integrase family protein; KEGG: bmu:Bmul_5789 integrase family protein; integrase family protein complement(642769..643962) Ralstonia pickettii 12J 6285918 YP_001892858.1 CDS Rpic_4336 NC_010678.1 643997 644638 R KEGG: kpn:KPN_pKPN3p05907 hypothetical protein; hypothetical protein complement(643997..644638) Ralstonia pickettii 12J 6285920 YP_001892859.1 CDS Rpic_4337 NC_010678.1 644653 644928 R PFAM: plasmid stabilization system; KEGG: sfl:CP0218 hypothetical protein; plasmid stabilization system complement(644653..644928) Ralstonia pickettii 12J 6285921 YP_001892860.1 CDS Rpic_4338 NC_010678.1 644928 645191 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: smd:Smed_6450 CopG family transcriptional regulator; CopG family transcriptional regulator complement(644928..645191) Ralstonia pickettii 12J 6285927 YP_001892861.1 CDS Rpic_4339 NC_010678.1 645243 645974 R KEGG: gvi:gll4023 unknown protein; hypothetical protein complement(645243..645974) Ralstonia pickettii 12J 6285931 YP_001892862.1 CDS Rpic_4340 NC_010678.1 646188 647225 D KEGG: reu:Reut_A1626 hypothetical protein; hypothetical protein 646188..647225 Ralstonia pickettii 12J 6285932 YP_001892863.1 CDS Rpic_4341 NC_010678.1 647610 647912 R KEGG: rme:Rmet_4495 hypothetical protein; hypothetical protein complement(647610..647912) Ralstonia pickettii 12J 6285936 YP_001892864.1 CDS Rpic_4342 NC_010678.1 648051 648356 D KEGG: rme:Rmet_4494 hypothetical protein; hypothetical protein 648051..648356 Ralstonia pickettii 12J 6285937 YP_001892865.1 CDS Rpic_4343 NC_010678.1 648416 648592 D hypothetical protein 648416..648592 Ralstonia pickettii 12J 6285938 YP_001892866.1 CDS Rpic_4344 NC_010678.1 648610 648915 D hypothetical protein 648610..648915 Ralstonia pickettii 12J 6285939 YP_001892867.1 CDS Rpic_4345 NC_010678.1 648984 649229 D hypothetical protein 648984..649229 Ralstonia pickettii 12J 6285940 YP_001892868.1 CDS Rpic_4346 NC_010678.1 649234 649443 D hypothetical protein 649234..649443 Ralstonia pickettii 12J 6285942 YP_001892869.1 CDS Rpic_4347 NC_010678.1 649516 651111 D KEGG: dme:Dmel_CG31439 CG31439; hypothetical protein 649516..651111 Ralstonia pickettii 12J 6285943 YP_001892870.1 CDS Rpic_4348 NC_010678.1 651127 651456 D KEGG: xcb:XC_2118 minor coat protein; minor coat protein 651127..651456 Ralstonia pickettii 12J 6285945 YP_001892871.1 CDS Rpic_4349 NC_010678.1 651461 652792 D PFAM: Zonular occludens toxin; KEGG: xcb:XC_2117 pI protein; Zonular occludens toxin 651461..652792 Ralstonia pickettii 12J 6285946 YP_001892872.1 CDS Rpic_4350 NC_010678.1 653239 654120 D KEGG: rme:Rmet_4488 hypothetical protein; hypothetical protein 653239..654120 Ralstonia pickettii 12J 6285948 YP_001892873.1 CDS Rpic_4351 NC_010678.1 654356 655039 R hypothetical protein complement(654356..655039) Ralstonia pickettii 12J 6285949 YP_001892874.1 CDS Rpic_4352 NC_010678.1 655017 657194 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bbt:BBta_4913 membrane protein of unknown function; type I phosphodiesterase/nucleotide pyrophosphatase complement(655017..657194) Ralstonia pickettii 12J 6285950 YP_001892875.1 CDS Rpic_4353 NC_010678.1 657655 658620 D PFAM: regulatory protein MerR; KEGG: bvi:Bcep1808_5897 MerR family transcriptional regulator; MerR family transcriptional regulator 657655..658620 Ralstonia pickettii 12J 6285951 YP_001892876.1 CDS Rpic_4354 NC_010678.1 658733 659485 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmu:Bmul_5842 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 658733..659485 Ralstonia pickettii 12J 6285952 YP_001892877.1 CDS Rpic_4355 NC_010678.1 659482 659937 D KEGG: bmu:Bmul_5841 hypothetical protein; hypothetical protein 659482..659937 Ralstonia pickettii 12J 6285953 YP_001892878.1 CDS Rpic_4356 NC_010678.1 659967 660443 D TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rso:RSc1996 transmembrane succinate dehydrogenase (cytochrome b-556 subunit) oxidoreductase protein; succinate dehydrogenase, cytochrome b556 subunit 659967..660443 Ralstonia pickettii 12J 6285954 YP_001892879.1 CDS Rpic_4357 NC_010678.1 660454 660819 D TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rso:RSc1995 transmembrane succinate dehydrogenase (hydrophobic membrane anchor subunit) oxidoreductase protein; succinate dehydrogenase, hydrophobic membrane anchor protein 660454..660819 Ralstonia pickettii 12J 6285956 YP_001892880.1 CDS sdhA NC_010678.1 660823 662601 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 660823..662601 Ralstonia pickettii 12J 6285957 YP_001892881.1 CDS sdhB NC_010678.1 662624 663325 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 662624..663325 Ralstonia pickettii 12J 6285958 YP_001892882.1 CDS Rpic_4360 NC_010678.1 663476 664207 R KEGG: bur:Bcep18194_C6587 hypothetical protein; hypothetical protein complement(663476..664207) Ralstonia pickettii 12J 6285959 YP_001892883.1 CDS Rpic_4361 NC_010678.1 664204 664836 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_C6588 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 subunit complement(664204..664836) Ralstonia pickettii 12J 6285960 YP_001892884.1 CDS Rpic_4362 NC_010678.1 664979 665563 R PFAM: beta-Ig-H3/fasciclin; KEGG: aav:Aave_3256 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(664979..665563) Ralstonia pickettii 12J 6285961 YP_001892885.1 CDS Rpic_4363 NC_010678.1 666070 666651 D KEGG: pna:Pnap_3162 globin; hypothetical protein 666070..666651 Ralstonia pickettii 12J 6285962 YP_001892886.1 CDS Rpic_4364 NC_010678.1 666648 667334 D hypothetical protein 666648..667334 Ralstonia pickettii 12J 6285963 YP_001892887.1 CDS Rpic_4365 NC_010678.1 667604 668074 D KEGG: reh:H16_A1984 hypothetical protein; hypothetical protein 667604..668074 Ralstonia pickettii 12J 6285966 YP_001892888.1 CDS Rpic_4366 NC_010678.1 668002 668181 R hypothetical protein complement(668002..668181) Ralstonia pickettii 12J 6285967 YP_001892889.1 CDS Rpic_4367 NC_010678.1 668197 669372 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bte:BTH_II0064 efflux transporter, RND family, MFP subunit subfamily; RND family efflux transporter MFP subunit complement(668197..669372) Ralstonia pickettii 12J 6285968 YP_001892890.1 CDS Rpic_4368 NC_010678.1 669369 671738 R PFAM: protein of unknown function DUF214; KEGG: bte:BTH_II0063 permease, domain protein; hypothetical protein complement(669369..671738) Ralstonia pickettii 12J 6285969 YP_001892891.1 CDS Rpic_4369 NC_010678.1 671732 672436 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: bte:BTH_II0062 ABC transporter, ATP-binding protein; ABC transporter complement(671732..672436) Ralstonia pickettii 12J 6285971 YP_001892892.1 CDS Rpic_4370 NC_010678.1 672451 672741 R KEGG: rso:RS00827 hypothetical protein; hypothetical protein complement(672451..672741) Ralstonia pickettii 12J 6285973 YP_001892893.1 CDS Rpic_4371 NC_010678.1 672975 673619 R KEGG: rso:RSc0198 probable transmembrane protein; hypothetical protein complement(672975..673619) Ralstonia pickettii 12J 6285974 YP_001892894.1 CDS Rpic_4372 NC_010678.1 673625 675916 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; Hemerythrin HHE cation binding domain protein; KEGG: reu:Reut_A1234 ATPase, E1-E2 type:heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(673625..675916) Ralstonia pickettii 12J 6285975 YP_001892895.1 CDS Rpic_4373 NC_010678.1 675952 676476 R PFAM: cytochrome B561; KEGG: rso:RSc0199 probable cytochrome b561 cytochrome transmembrane protein; cytochrome B561 complement(675952..676476) Ralstonia pickettii 12J 6285976 YP_001892896.1 CDS Rpic_4374 NC_010678.1 676522 677778 R KEGG: reu:Reut_B5656 hypothetical protein; hypothetical protein complement(676522..677778) Ralstonia pickettii 12J 6285977 YP_001892897.1 CDS Rpic_4375 NC_010678.1 677775 680888 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: reu:Reut_B5655 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(677775..680888) Ralstonia pickettii 12J 6285978 YP_001892898.1 CDS Rpic_4376 NC_010678.1 680888 681973 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: reu:Reut_B5654 secretion protein HlyD; RND family efflux transporter MFP subunit complement(680888..681973) Ralstonia pickettii 12J 6285979 YP_001892899.1 CDS Rpic_4377 NC_010678.1 682272 682742 R KEGG: rme:Rmet_5683 hypothetical protein; hypothetical protein complement(682272..682742) Ralstonia pickettii 12J 6285984 YP_001892900.1 CDS Rpic_4378 NC_010678.1 682880 684436 R catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase complement(682880..684436) Ralstonia pickettii 12J 6285985 YP_001892901.1 CDS Rpic_4379 NC_010678.1 684438 684716 R KEGG: rso:RSc0203 hypothetical protein; hypothetical protein complement(684438..684716) Ralstonia pickettii 12J 6285986 YP_001892902.1 CDS Rpic_4380 NC_010678.1 684746 685687 R Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase complement(684746..685687) Ralstonia pickettii 12J 6285988 YP_001892903.1 CDS Rpic_4381 NC_010678.1 685684 687048 R PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rso:RSc0201 hypothetical protein; beta-lactamase complement(685684..687048) Ralstonia pickettii 12J 6285991 YP_001892904.1 CDS Rpic_4382 NC_010678.1 687067 687489 R PFAM: heat shock protein Hsp20; KEGG: rso:RSc0200 small heat shock protein; heat shock protein Hsp20 complement(687067..687489) Ralstonia pickettii 12J 6285992 YP_001892905.1 CDS Rpic_4383 NC_010678.1 687829 688329 D KEGG: bmu:Bmul_5872 hypothetical protein; hypothetical protein 687829..688329 Ralstonia pickettii 12J 6285994 YP_001892906.1 CDS Rpic_4384 NC_010678.1 688344 688565 D KEGG: bch:Bcen2424_6850 hypothetical protein; hypothetical protein 688344..688565 Ralstonia pickettii 12J 6285995 YP_001892907.1 CDS Rpic_4385 NC_010678.1 688671 690662 D KEGG: reu:Reut_C6194 peptidase M41, FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 688671..690662 Ralstonia pickettii 12J 6285996 YP_001892908.1 CDS Rpic_4386 NC_010678.1 690654 691940 R PFAM: Erythromycin esterase; KEGG: reu:Reut_B5196 erythromycin esterase; erythromycin esterase complement(690654..691940) Ralstonia pickettii 12J 6285997 YP_001892909.1 CDS Rpic_4387 NC_010678.1 692208 692708 D KEGG: reu:Reut_B5193 hypothetical protein; hypothetical protein 692208..692708 Ralstonia pickettii 12J 6285999 YP_001892910.1 CDS Rpic_4388 NC_010678.1 692841 693773 R KEGG: bvi:Bcep1808_6309 PfkB domain protein; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase complement(692841..693773) Ralstonia pickettii 12J 6286001 YP_001892911.1 CDS Rpic_4389 NC_010678.1 693983 694246 D KEGG: bpd:BURPS668_A1549 hypothetical protein; hypothetical protein 693983..694246 Ralstonia pickettii 12J 6286002 YP_001892912.1 CDS Rpic_4390 NC_010678.1 694295 696694 D KEGG: reu:Reut_A1162 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: PEP-utilizing protein; pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; phosphoenolpyruvate synthase 694295..696694 Ralstonia pickettii 12J 6286003 YP_001892913.1 CDS Rpic_4391 NC_010678.1 696722 699382 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sen:SACE_2432 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha complement(696722..699382) Ralstonia pickettii 12J 6286005 YP_001892914.1 CDS Rpic_4392 NC_010678.1 699370 700947 R PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: swi:Swit_1474 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) complement(699370..700947) Ralstonia pickettii 12J 6286007 YP_001892915.1 CDS Rpic_4393 NC_010678.1 701759 703507 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bpm:BURPS1710b_1485 two-component hybrid sensor and regulator; integral membrane sensor signal transduction histidine kinase 701759..703507 Ralstonia pickettii 12J 6286008 YP_001892916.1 CDS Rpic_4395 NC_010678.1 704052 704597 D PFAM: heat shock protein Hsp20; KEGG: bte:BTH_II0924 heat shock protein, family; heat shock protein Hsp20 704052..704597 Ralstonia pickettii 12J 6285418 YP_001892917.1 CDS Rpic_4396 NC_010678.1 704812 705153 D KEGG: bte:BTH_I2124 sigma 54 modulation protein; hypothetical protein 704812..705153 Ralstonia pickettii 12J 6286010 YP_001892918.1 CDS Rpic_4397 NC_010678.1 705150 705398 D hypothetical protein 705150..705398 Ralstonia pickettii 12J 6286013 YP_001892919.1 CDS Rpic_4398 NC_010678.1 705471 706136 R KEGG: bte:BTH_II1308 hypothetical protein; hypothetical protein complement(705471..706136) Ralstonia pickettii 12J 6286014 YP_001892920.1 CDS Rpic_4399 NC_010678.1 706210 706365 D hypothetical protein 706210..706365 Ralstonia pickettii 12J 6286015 YP_001892921.1 CDS Rpic_4400 NC_010678.1 706368 708005 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: reh:H16_A1997 chaperonin GroEL (HSP60 family); chaperonin GroEL 706368..708005 Ralstonia pickettii 12J 6286016 YP_001892922.1 CDS Rpic_4401 NC_010678.1 708068 708505 D hypothetical protein 708068..708505 Ralstonia pickettii 12J 6286018 YP_001892923.1 CDS Rpic_4402 NC_010678.1 708522 708905 D hypothetical protein 708522..708905 Ralstonia pickettii 12J 6286021 YP_001892924.1 CDS Rpic_4403 NC_010678.1 708922 710739 R class I; catalyzes the formation of deoxyribonucleotides from their corresponding ribonucleotides; ribonucleotide reductase-like protein complement(708922..710739) Ralstonia pickettii 12J 6286022 YP_001892925.1 CDS Rpic_4404 NC_010678.1 710977 711465 D KEGG: rso:RSc0193 hypothetical protein; hypothetical protein 710977..711465 Ralstonia pickettii 12J 6286023 YP_001892926.1 CDS Rpic_4405 NC_010678.1 711679 712041 D KEGG: reu:Reut_B4032 conserved hypothetical signal peptide protein; hypothetical protein 711679..712041 Ralstonia pickettii 12J 6286024 YP_001892927.1 CDS Rpic_4406 NC_010678.1 712094 714484 R PFAM: beta-lactamase; conserved hypothetical protein; KEGG: bte:BTH_II0925 beta-lactamase; hypothetical protein complement(712094..714484) Ralstonia pickettii 12J 6286025 YP_001892928.1 CDS Rpic_4407 NC_010678.1 714439 715722 R PFAM: protein of unknown function DUF187; KEGG: bvi:Bcep1808_6307 hypothetical protein; hypothetical protein complement(714439..715722) Ralstonia pickettii 12J 6286026 YP_001892929.1 CDS Rpic_4408 NC_010678.1 715694 716485 R PFAM: polysaccharide deacetylase; KEGG: bmu:Bmul_5874 polysaccharide deacetylase; polysaccharide deacetylase complement(715694..716485) Ralstonia pickettii 12J 6286027 YP_001892930.1 CDS Rpic_4409 NC_010678.1 716538 717131 R PFAM: Rhomboid family protein; KEGG: rso:RS02331 probable transmembrane protein; rhomboid family protein complement(716538..717131) Ralstonia pickettii 12J 6286028 YP_001892931.1 CDS Rpic_4410 NC_010678.1 717312 719060 D PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: mca:MCA1213 hypothetical protein; PHP domain-containing protein 717312..719060 Ralstonia pickettii 12J 6286029 YP_001892932.1 CDS Rpic_4411 NC_010678.1 719222 719539 D KEGG: bpl:BURPS1106A_2358 ribosomal subunit interface protein; ribosomal subunit interface protein 719222..719539 Ralstonia pickettii 12J 6286030 YP_001892933.1 CDS Rpic_4412 NC_010678.1 719563 720309 R TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B3865 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase complement(719563..720309) Ralstonia pickettii 12J 6286031 YP_001892934.1 CDS Rpic_4413 NC_010678.1 720317 720820 R KEGG: reu:Reut_A1232 hypothetical protein; hypothetical protein complement(720317..720820) Ralstonia pickettii 12J 6286032 YP_001892935.1 CDS Rpic_4414 NC_010678.1 720829 721482 R KEGG: bpd:BURPS668_A3218 hypothetical protein; hypothetical protein complement(720829..721482) Ralstonia pickettii 12J 6286033 YP_001892936.1 CDS Rpic_4415 NC_010678.1 721530 722567 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc0194 probable zinc-dependent alcohol dehydrogenase oxidoreductase protein; alcohol dehydrogenase GroES domain-containing protein complement(721530..722567) Ralstonia pickettii 12J 6286034 YP_001892937.1 CDS Rpic_4416 NC_010678.1 722695 724245 D KEGG: rme:Rmet_5125 hypothetical protein; hypothetical protein 722695..724245 Ralstonia pickettii 12J 6286035 YP_001892938.1 CDS Rpic_4417 NC_010678.1 724431 724919 D KEGG: rso:RSc0193 hypothetical protein; hypothetical protein 724431..724919 Ralstonia pickettii 12J 6286036 YP_001892939.1 CDS Rpic_4418 NC_010678.1 724942 725406 D PFAM: CBS domain containing protein; KEGG: reh:H16_A2015 signal-transduction protein; signal-transduction protein with CBS domains 724942..725406 Ralstonia pickettii 12J 6286037 YP_001892940.1 CDS Rpic_4419 NC_010678.1 725447 726130 D KEGG: reu:Reut_A1157 hypothetical protein; hypothetical protein 725447..726130 Ralstonia pickettii 12J 6286038 YP_001892941.1 CDS Rpic_4420 NC_010678.1 726135 726785 D PFAM: phosphoribosyltransferase; KEGG: reh:H16_A1999 phosphoribosyl transferase; phosphoribosyltransferase 726135..726785 Ralstonia pickettii 12J 6286039 YP_001892942.1 CDS Rpic_4421 NC_010678.1 726826 729453 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; ATPase P; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bxe:Bxe_B2642 ATPase P; ATPase P complement(726826..729453) Ralstonia pickettii 12J 6286040 YP_001892943.1 CDS Rpic_4422 NC_010678.1 729674 731149 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_A1225 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(729674..731149) Ralstonia pickettii 12J 6286041 YP_001892944.1 CDS Rpic_4423 NC_010678.1 731146 732231 R PFAM: secretion protein HlyD family protein; KEGG: reu:Reut_A1224 secretion protein HlyD; secretion protein HlyD family protein complement(731146..732231) Ralstonia pickettii 12J 6286042 YP_001892945.1 CDS Rpic_4424 NC_010678.1 732228 732926 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: reu:Reut_A1223 ABC transporter; ABC transporter complement(732228..732926) Ralstonia pickettii 12J 6286043 YP_001892946.1 CDS Rpic_4425 NC_010678.1 732929 734065 R PFAM: protein of unknown function DUF214; KEGG: reu:Reut_A1222 protein of unknown function DUF214; hypothetical protein complement(732929..734065) Ralstonia pickettii 12J 6286044 YP_001892947.1 CDS Rpic_4426 NC_010678.1 734210 734857 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rso:RSc0192 probable response regulator transcription regulator protein; LuxR family two component transcriptional regulator complement(734210..734857) Ralstonia pickettii 12J 6286045 YP_001892948.1 CDS Rpic_4427 NC_010678.1 734854 736242 R KEGG: rso:RSc0191 probable transmembrane two component system sensor kinase transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(734854..736242) Ralstonia pickettii 12J 6286046 YP_001892949.1 CDS Rpic_4428 NC_010678.1 736497 737288 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rso:RSc0190 probable transcription regulator protein; Crp/Fnr family transcriptional regulator 736497..737288 Ralstonia pickettii 12J 6286047 YP_001892950.1 CDS Rpic_4429 NC_010678.1 737367 738014 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: rso:RSc0189 hypothetical protein; transport-associated complement(737367..738014) Ralstonia pickettii 12J 6286048 YP_001892951.1 CDS Rpic_4430 NC_010678.1 738045 738407 R PFAM: zinc finger DksA/TraR C4-type; KEGG: rso:RSc1511 hypothetical protein; TraR/DksA family transcriptional regulator complement(738045..738407) Ralstonia pickettii 12J 6286049 YP_001892952.1 CDS Rpic_4431 NC_010678.1 738455 738985 R KEGG: rso:RSc0187 hypothetical protein; hypothetical protein complement(738455..738985) Ralstonia pickettii 12J 6286051 YP_001892953.1 CDS Rpic_4432 NC_010678.1 739032 739685 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: rso:RSc0186 hypothetical protein; transport-associated complement(739032..739685) Ralstonia pickettii 12J 6286052 YP_001892954.1 CDS Rpic_4433 NC_010678.1 739719 740558 R PFAM: UspA domain protein; KEGG: rso:RSc0185 hypothetical protein; UspA domain-containing protein complement(739719..740558) Ralstonia pickettii 12J 6285640 YP_001892955.1 CDS Rpic_4434 NC_010678.1 740599 741099 R PFAM: UspA domain protein; KEGG: rso:RSc0184 hypothetical protein; UspA domain-containing protein complement(740599..741099) Ralstonia pickettii 12J 6286050 YP_001892956.1 CDS Rpic_4435 NC_010678.1 741386 741853 D PFAM: CBS domain containing protein; KEGG: rso:RSc0183 hypothetical protein; signal-transduction protein with CBS domains 741386..741853 Ralstonia pickettii 12J 6285161 YP_001892957.1 CDS Rpic_4436 NC_010678.1 741850 743295 R KEGG: rso:RSc0182 probable transmembrane protein; hypothetical protein complement(741850..743295) Ralstonia pickettii 12J 6285454 YP_001892958.1 CDS Rpic_4437 NC_010678.1 743449 744459 D TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc1505 probable alcohol dehydrogenase-like oxidoreductase protein; zinc-binding alcohol dehydrogenase family protein 743449..744459 Ralstonia pickettii 12J 6285924 YP_001892959.1 CDS Rpic_4438 NC_010678.1 744540 744995 D PFAM: UspA domain protein; KEGG: rso:RSc0179 hypothetical protein; UspA domain-containing protein 744540..744995 Ralstonia pickettii 12J 6285163 YP_001892960.1 CDS Rpic_4440 NC_010678.1 745452 746345 D KEGG: rme:Rmet_1742 hypothetical protein; hypothetical protein 745452..746345 Ralstonia pickettii 12J 6285916 YP_001892961.1 CDS Rpic_4441 NC_010678.1 746589 752438 D KEGG: rso:RSp0994 probable excinuclease ABC subunit A (DNA repair ATP-binding) ABC transporter protein; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; SMART: AAA ATPase; excinuclease ABC subunit A 746589..752438 Ralstonia pickettii 12J 6285430 YP_001892962.1 CDS Rpic_4442 NC_010678.1 752636 754672 D PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: rso:RSp0383 probable flagellar HOOK-associated protein 2 (filament CAP protein); flagellar hook-associated 2 domain-containing protein 752636..754672 Ralstonia pickettii 12J 6285767 YP_001892963.1 CDS Rpic_4443 NC_010678.1 755005 755535 D KEGG: bvi:Bcep1808_5441 hypothetical protein; hypothetical protein 755005..755535 Ralstonia pickettii 12J 6285781 YP_001892964.1 CDS Rpic_4444 NC_010678.1 755665 758391 R PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rso:RS01655 probable transmembrane protein; cell division protein FtsK complement(755665..758391) Ralstonia pickettii 12J 6285783 YP_001892965.1 CDS Rpic_4445 NC_010678.1 758542 759843 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0834 probable hexuronate transporter transmembrane protein; major facilitator superfamily protein complement(758542..759843) Ralstonia pickettii 12J 6285345 YP_001892966.1 CDS Rpic_4446 NC_010678.1 759896 760798 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rso:RS05363 hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein complement(759896..760798) Ralstonia pickettii 12J 6285882 YP_001892967.1 CDS Rpic_4447 NC_010678.1 760803 761648 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: rso:RS05364 hypothetical protein; NAD-dependent epimerase/dehydratase complement(760803..761648) Ralstonia pickettii 12J 6285885 YP_001892968.1 CDS Rpic_4448 NC_010678.1 761650 763251 R KEGG: rso:RSp0830 probable D-galactarate dehydratase (D-galactarate dehydrogenase) protein; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase complement(761650..763251) Ralstonia pickettii 12J 6285061 YP_001892969.1 CDS Rpic_4449 NC_010678.1 763293 764702 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rso:RSp0829 probable glucarate dehydratase protein; mandelate racemase/muconate lactonizing protein complement(763293..764702) Ralstonia pickettii 12J 6285884 YP_001892970.1 CDS Rpic_4450 NC_010678.1 764721 766073 R TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0828 glucarate transporter (D-glucarate permease) transmembrane protein; d-galactonate transporter complement(764721..766073) Ralstonia pickettii 12J 6285550 YP_001892971.1 CDS Rpic_4451 NC_010678.1 766174 767745 R PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RS05368 probable ketoglutarate semialdehyde dehydrogenase protein; aldehyde dehydrogenase complement(766174..767745) Ralstonia pickettii 12J 6285207 YP_001892972.1 CDS Rpic_4452 NC_010678.1 767773 768711 R catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase complement(767773..768711) Ralstonia pickettii 12J 6285871 YP_001892973.1 CDS Rpic_4453 NC_010678.1 769051 769947 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05372 probable transcription regulator protein; LysR family transcriptional regulator 769051..769947 Ralstonia pickettii 12J 6285339 YP_001892974.1 CDS Rpic_4454 NC_010678.1 770003 770368 D KEGG: reh:H16_B2353 hypothetical protein; hypothetical protein 770003..770368 Ralstonia pickettii 12J 6285683 YP_001892975.1 CDS Rpic_4455 NC_010678.1 770365 771306 R TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B0887 ABC-type transporter, periplasmic component: TauT family; aliphatic sulfonate ABC transporter periplasmic substrate-binding protein complement(770365..771306) Ralstonia pickettii 12J 6285428 YP_001892976.1 CDS Rpic_4456 NC_010678.1 771332 772498 R PFAM: cytochrome c class I; KEGG: reh:H16_B1869 cytochrome c, mono-and diheme variants; cytochrome c class I complement(771332..772498) Ralstonia pickettii 12J 6285471 YP_001892977.1 CDS Rpic_4457 NC_010678.1 772513 773310 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: reh:H16_B1868 ABC-type sulfonate transporter, ATPase component; ABC transporter complement(772513..773310) Ralstonia pickettii 12J 6284994 YP_001892978.1 CDS Rpic_4458 NC_010678.1 773304 774341 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_2220 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(773304..774341) Ralstonia pickettii 12J 6285088 YP_001892979.1 CDS Rpic_4459 NC_010678.1 774377 775384 R PFAM: NMT1/THI5 like domain protein; KEGG: rme:Rmet_2219 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; NMT1/THI5 like domain-containing protein complement(774377..775384) Ralstonia pickettii 12J 6285336 YP_001892980.1 CDS Rpic_4460 NC_010678.1 775434 776273 R PFAM: class II aldolase/adducin family protein; KEGG: bmu:Bmul_4335 class II aldolase/adducin family protein; hypothetical protein complement(775434..776273) Ralstonia pickettii 12J 6285657 YP_001892981.1 CDS Rpic_4461 NC_010678.1 776283 777374 R PFAM: Luciferase-like monooxygenase; KEGG: reu:Reut_B5047 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase complement(776283..777374) Ralstonia pickettii 12J 6285730 YP_001892982.1 CDS Rpic_4462 NC_010678.1 777572 778780 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_2217 acyl-CoA dehydrogenase; Acyl-CoA dehydrogenase type 2 domain 777572..778780 Ralstonia pickettii 12J 6285851 YP_001892983.1 CDS Rpic_4463 NC_010678.1 778841 779500 D KEGG: reu:Reut_B5045 cysteine dioxygenase type I; cysteine dioxygenase type I 778841..779500 Ralstonia pickettii 12J 6285644 YP_001892984.1 CDS Rpic_4464 NC_010678.1 779497 781146 D PFAM: Rhodanese domain protein; KEGG: reh:H16_B1862 rhodanese-related sulfurtransferase; rhodanese domain-containing protein 779497..781146 Ralstonia pickettii 12J 6285245 YP_001892985.1 CDS Rpic_4465 NC_010678.1 781518 782405 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RS01886 probable transmembrane protein; hypothetical protein 781518..782405 Ralstonia pickettii 12J 6285481 YP_001892986.1 CDS Rpic_4466 NC_010678.1 782421 784433 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rso:RS01894 hypothetical protein; diguanylate cyclase/phosphodiesterase complement(782421..784433) Ralstonia pickettii 12J 6285692 YP_001892987.1 CDS Rpic_4467 NC_010678.1 784430 785002 R KEGG: rso:RS01895 transmembrane protein; hypothetical protein complement(784430..785002) Ralstonia pickettii 12J 6285372 YP_001892988.1 CDS Rpic_4468 NC_010678.1 784999 787014 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS01896 probable TonB-dependent receptor signal peptide protein; TonB-dependent receptor complement(784999..787014) Ralstonia pickettii 12J 6285244 YP_001892989.1 CDS atpC NC_010678.1 787273 787692 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(787273..787692) Ralstonia pickettii 12J 6285586 YP_001892990.1 CDS Rpic_4470 NC_010678.1 787929 788864 D TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_4191 LysR family transcriptional regulator; LysR family transcriptional regulator 787929..788864 Ralstonia pickettii 12J 6285155 YP_001892991.1 CDS Rpic_4471 NC_010678.1 788910 789593 D TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: reh:H16_B1164 phosphoserine phosphatase; HAD-superfamily hydrolase 788910..789593 Ralstonia pickettii 12J 6285467 YP_001892992.1 CDS Rpic_4472 NC_010678.1 789653 790876 R TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_5887 hypothetical protein; FAD dependent oxidoreductase complement(789653..790876) Ralstonia pickettii 12J 6286017 YP_001892993.1 CDS Rpic_4473 NC_010678.1 790877 791902 R TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: reu:Reut_B5525 extracellular solute-binding protein, family 1; 2-aminoethylphosphonate ABC transporter substrate-binding protein complement(790877..791902) Ralstonia pickettii 12J 6285470 YP_001892994.1 CDS Rpic_4474 NC_010678.1 791958 792836 R catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase complement(791958..792836) Ralstonia pickettii 12J 6285145 YP_001892995.1 CDS Rpic_4475 NC_010678.1 792881 794644 R TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B0110 ABC-type transporter, duplicated permease domains; 2-aminoethylphosphonate ABC transport system, permease protein complement(792881..794644) Ralstonia pickettii 12J 6285719 YP_001892996.1 CDS Rpic_4476 NC_010678.1 794652 795794 R KEGG: reh:H16_B0109 ABC-type transporter, ATPase component; TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding protein component; PFAM: ABC transporter; SMART: AAA ATPase; 2-aminoethylphosphonate ABC transporter ATP-binding protein complement(794652..795794) Ralstonia pickettii 12J 6285711 YP_001892997.1 CDS Rpic_4477 NC_010678.1 795873 796739 R TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B5518 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator complement(795873..796739) Ralstonia pickettii 12J 6285206 YP_001892998.1 CDS Rpic_4478 NC_010678.1 797063 798766 D KEGG: rso:RS01899 probable hemagglutinin-related transmembrane protein; hemagglutinin-related transmembrane protein 797063..798766 Ralstonia pickettii 12J 6285872 YP_001892999.1 CDS Rpic_4479 NC_010678.1 798921 801506 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(798921..801506) Ralstonia pickettii 12J 6285515 YP_001893000.1 CDS Rpic_4480 NC_010678.1 801717 802055 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RS01900 probable ferredoxin protein; 4Fe-4S ferredoxin 801717..802055 Ralstonia pickettii 12J 6285460 YP_001893001.1 CDS Rpic_4481 NC_010678.1 802085 802906 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 802085..802906 Ralstonia pickettii 12J 6285226 YP_001893002.1 CDS Rpic_4482 NC_010678.1 802935 803468 R PFAM: protein of unknown function DUF962; KEGG: rso:RS01901 probable transmembrane protein; hypothetical protein complement(802935..803468) Ralstonia pickettii 12J 6285364 YP_001893003.1 CDS Rpic_4483 NC_010678.1 803616 804347 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rso:RS01902 transcription regulator protein; Crp/Fnr family transcriptional regulator 803616..804347 Ralstonia pickettii 12J 6285594 YP_001893004.1 CDS Rpic_4484 NC_010678.1 804477 806579 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 804477..806579 Ralstonia pickettii 12J 6285613 YP_001893005.1 CDS Rpic_4486 NC_010678.1 806859 808016 R PFAM: Citrate transporter; KEGG: rso:RS01905 probable transmembrane protein; citrate transporter complement(806859..808016) Ralstonia pickettii 12J 6285203 YP_001893006.1 CDS Rpic_4487 NC_010678.1 808158 808691 R PFAM: helix-turn-helix domain protein; KEGG: rso:RS01906 probable glycine rich protein; XRE family transcriptional regulator complement(808158..808691) Ralstonia pickettii 12J 6285675 YP_001893007.1 CDS dnaE2 NC_010678.1 809216 812455 R DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase complement(809216..812455) Ralstonia pickettii 12J 6284945 YP_001893008.1 CDS Rpic_4489 NC_010678.1 812463 814046 R KEGG: rso:RS01908 hypothetical protein; hypothetical protein complement(812463..814046) Ralstonia pickettii 12J 6284975 YP_001893009.1 CDS Rpic_4490 NC_010678.1 813979 814935 R KEGG: rso:RS01909 hypothetical protein; hypothetical protein complement(813979..814935) Ralstonia pickettii 12J 6285981 YP_001893010.1 CDS Rpic_4493 NC_010678.1 821861 822433 R KEGG: rso:RSc0705 probable transmembrane protein; hypothetical protein complement(821861..822433) Ralstonia pickettii 12J 6285402 YP_001893011.1 CDS Rpic_4494 NC_010678.1 822739 823944 D PFAM: fatty acid hydroxylase; KEGG: rso:RS01698 probable transmembrane protein; fatty acid hydroxylase 822739..823944 Ralstonia pickettii 12J 6285492 YP_001893012.1 CDS Rpic_4495 NC_010678.1 823962 824480 D PFAM: protein of unknown function DUF985; KEGG: rso:RS01699 hypothetical protein; hypothetical protein 823962..824480 Ralstonia pickettii 12J 6285807 YP_001893013.1 CDS Rpic_4496 NC_010678.1 824481 824603 R KEGG: rso:RS01700 hypothetical protein; hypothetical protein complement(824481..824603) Ralstonia pickettii 12J 6284995 YP_001893014.1 CDS Rpic_4497 NC_010678.1 824906 825784 D KEGG: bch:Bcen2424_1880 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 824906..825784 Ralstonia pickettii 12J 6285913 YP_001893015.1 CDS Rpic_4498 NC_010678.1 825853 827256 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reu:Reut_B3580 general substrate transporter:protein of unknown function DUF1228:major facilitator superfamily MFS_1; major facilitator superfamily protein complement(825853..827256) Ralstonia pickettii 12J 6284971 YP_001893016.1 CDS Rpic_4499 NC_010678.1 827328 828428 R PFAM: porin Gram-negative type; KEGG: dac:Daci_4894 porin gram-negative type; porin complement(827328..828428) Ralstonia pickettii 12J 6285720 YP_001893017.1 CDS Rpic_4500 NC_010678.1 828605 829555 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B3579 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; ferredoxin complement(828605..829555) Ralstonia pickettii 12J 6285508 YP_001893018.1 CDS Rpic_4501 NC_010678.1 829577 830539 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_B0738 predicted ring-cleavage extradiol dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(829577..830539) Ralstonia pickettii 12J 6285750 YP_001893019.1 CDS Rpic_4502 NC_010678.1 830576 832078 R PFAM: Aldehyde Dehydrogenase_; KEGG: reh:H16_B0737 aldehyde dehydrogenase, NAD-dependent; aldehyde dehydrogenase complement(830576..832078) Ralstonia pickettii 12J 6285674 YP_001893020.1 CDS Rpic_4503 NC_010678.1 832095 832898 R catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase complement(832095..832898) Ralstonia pickettii 12J 6285681 YP_001893021.1 CDS Rpic_4504 NC_010678.1 832931 834670 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reh:H16_B0735 acetolactate synthase large subunit; hypothetical protein complement(832931..834670) Ralstonia pickettii 12J 6285944 YP_001893022.1 CDS Rpic_4505 NC_010678.1 834663 835472 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B3574 short chain dehydrogenase; short chain dehydrogenase complement(834663..835472) Ralstonia pickettii 12J 6285768 YP_001893023.1 CDS Rpic_4506 NC_010678.1 835469 836296 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reu:Reut_B3598 regulatory protein, IclR; IclR family transcriptional regulator complement(835469..836296) Ralstonia pickettii 12J 6285710 YP_001893024.1 CDS Rpic_4507 NC_010678.1 836309 837211 R PFAM: alpha/beta hydrolase fold; KEGG: reu:Reut_B3568 alpha/beta hydrolase fold; alpha/beta hydrolase complement(836309..837211) Ralstonia pickettii 12J 6285731 YP_001893025.1 CDS Rpic_4508 NC_010678.1 837216 837752 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: reh:H16_B0732 hypothetical protein; cupin complement(837216..837752) Ralstonia pickettii 12J 6285127 YP_001893026.1 CDS Rpic_4509 NC_010678.1 837785 838558 R member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase complement(837785..838558) Ralstonia pickettii 12J 6285627 YP_001893027.1 CDS Rpic_4510 NC_010678.1 838551 839618 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: reu:Reut_B3570 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(838551..839618) Ralstonia pickettii 12J 6286020 YP_001893028.1 CDS Rpic_4511 NC_010678.1 839699 840004 R KEGG: reh:H16_B0729 hypothetical protein; hypothetical protein complement(839699..840004) Ralstonia pickettii 12J 6285685 YP_001893029.1 CDS Rpic_4512 NC_010678.1 840187 840753 R PFAM: regulatory protein TetR; KEGG: reh:H16_B1099 transcriptional regulator, TetR/AcrR-family; TetR family transcriptional regulator complement(840187..840753) Ralstonia pickettii 12J 6285895 YP_001893030.1 CDS Rpic_4513 NC_010678.1 840843 841244 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll0256 transcriptional regulatory protein; AraC family transcriptional regulator 840843..841244 Ralstonia pickettii 12J 6284999 YP_001893031.1 CDS Rpic_4514 NC_010678.1 841293 841769 R PFAM: protein of unknown function DUF1348; KEGG: pfl:PFL_3262 hypothetical protein; hypothetical protein complement(841293..841769) Ralstonia pickettii 12J 6285546 YP_001893032.1 CDS Rpic_4515 NC_010678.1 841913 842380 R PFAM: GCN5-related N-acetyltransferase; KEGG: bpt:Bpet3229 probable acetyltransferase; N-acetyltransferase GCN5 complement(841913..842380) Ralstonia pickettii 12J 6285407 YP_001893033.1 CDS Rpic_4516 NC_010678.1 842788 843039 R KEGG: cvi:CV_0580 hypothetical protein; hypothetical protein complement(842788..843039) Ralstonia pickettii 12J 6285401 YP_001893034.1 CDS Rpic_4517 NC_010678.1 843146 844081 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV_0581 LysR family transcriptional regulator; LysR family transcriptional regulator 843146..844081 Ralstonia pickettii 12J 6285841 YP_001893035.1 CDS Rpic_4518 NC_010678.1 844191 845219 D PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_1384 alpha/beta hydrolase fold; alpha/beta hydrolase 844191..845219 Ralstonia pickettii 12J 6285332 YP_001893036.1 CDS Rpic_4519 NC_010678.1 845360 845584 D KEGG: rso:RS01733 hypothetical protein; hypothetical protein 845360..845584 Ralstonia pickettii 12J 6285018 YP_001893037.1 CDS Rpic_4520 NC_010678.1 845612 846184 R KEGG: rso:RS01734 transmembrane protein; hypothetical protein complement(845612..846184) Ralstonia pickettii 12J 6285787 YP_001893038.1 CDS Rpic_4521 NC_010678.1 846250 847122 R PFAM: aminotransferase class IV; KEGG: rso:RS01735 D-alanine aminotransferase (D-aspartate aminotransferase) protein; class IV aminotransferase complement(846250..847122) Ralstonia pickettii 12J 6285735 YP_001893039.1 CDS Rpic_4522 NC_010678.1 847283 847795 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS01736 hypothetical protein; N-acetyltransferase GCN5 847283..847795 Ralstonia pickettii 12J 6285361 YP_001893040.1 CDS Rpic_4523 NC_010678.1 847891 848208 D KEGG: rso:RS01741 probable signal peptide protein; signal peptide protein 847891..848208 Ralstonia pickettii 12J 6285197 YP_001893041.1 CDS Rpic_4524 NC_010678.1 848212 848955 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RS01742 probable amino-acid composite ATP-binding transmembrane ABC transporter protein; ABC transporter complement(848212..848955) Ralstonia pickettii 12J 6285313 YP_001893042.1 CDS Rpic_4525 NC_010678.1 848967 850793 R PFAM: inner-membrane translocator; ABC transporter; SMART: AAA ATPase; KEGG: rso:RS01743 probable amino-acid composite ATP-binding transmembrane ABC transporter protein; ABC transporter complement(848967..850793) Ralstonia pickettii 12J 6285382 YP_001893043.1 CDS Rpic_4526 NC_010678.1 850798 851850 R PFAM: inner-membrane translocator; KEGG: rso:RS01744 probable amino-acid transmembrane ABC transporter protein; inner-membrane translocator complement(850798..851850) Ralstonia pickettii 12J 6285894 YP_001893044.1 CDS Rpic_4527 NC_010678.1 851965 852852 R PFAM: regulatory protein IclR; KEGG: rso:RS01745 probable transcription regulator protein; IclR family transcriptional regulator complement(851965..852852) Ralstonia pickettii 12J 6285989 YP_001893045.1 CDS Rpic_4528 NC_010678.1 853119 854078 D PFAM: beta-lactamase domain protein; KEGG: rso:RS01746 hypothetical protein; beta-lactamase 853119..854078 Ralstonia pickettii 12J 6286019 YP_001893046.1 CDS Rpic_4529 NC_010678.1 854135 855814 D PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rso:RS01747 hypothetical protein; FAD-dependent oxidoreductase 854135..855814 Ralstonia pickettii 12J 6285425 YP_001893047.1 CDS Rpic_4530 NC_010678.1 855820 856026 D KEGG: rso:RS01748 hypothetical protein; hypothetical protein 855820..856026 Ralstonia pickettii 12J 6285601 YP_001893048.1 CDS Rpic_4531 NC_010678.1 856067 857116 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B1154 oxidoreductase; aldo/keto reductase complement(856067..857116) Ralstonia pickettii 12J 6285835 YP_001893049.1 CDS Rpic_4532 NC_010678.1 857316 858233 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS01757 probable transcription regulator transcription regulator protein; LysR family transcriptional regulator complement(857316..858233) Ralstonia pickettii 12J 6284986 YP_001893050.1 CDS Rpic_4533 NC_010678.1 858258 858368 R hypothetical protein complement(858258..858368) Ralstonia pickettii 12J 6285964 YP_001893051.1 CDS Rpic_4534 NC_010678.1 858510 859856 D An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 858510..859856 Ralstonia pickettii 12J 6285987 YP_001893052.1 CDS Rpic_4535 NC_010678.1 860163 861434 D KEGG: rso:RS01759 probable fumarylacetoacetase (fumarylacetoacetate hydrolase) protein; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969; fumarylacetoacetase 860163..861434 Ralstonia pickettii 12J 6285965 YP_001893053.1 CDS Rpic_4536 NC_010678.1 861474 862112 R PFAM: Negative transcriptional regulator; KEGG: rso:RS01760 hypothetical protein; FMN-binding negative transcriptional regulator complement(861474..862112) Ralstonia pickettii 12J 6285092 YP_001893054.1 CDS Rpic_4537 NC_010678.1 862236 863546 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: bmu:Bmul_5922 ABC transporter; ABC transporter complement(862236..863546) Ralstonia pickettii 12J 6285205 YP_001893055.1 CDS Rpic_4538 NC_010678.1 863552 865285 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmu:Bmul_5923 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(863552..865285) Ralstonia pickettii 12J 6284940 YP_001893056.1 CDS Rpic_4539 NC_010678.1 865423 866580 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS01762 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase complement(865423..866580) Ralstonia pickettii 12J 6284955 YP_001893057.1 CDS Rpic_4540 NC_010678.1 866693 867613 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B5494 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 866693..867613 Ralstonia pickettii 12J 6285333 YP_001893058.1 CDS Rpic_4541 NC_010678.1 867614 868531 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSp0677 transcriptional activator MetR transcription regulator protein; LysR family transcriptional regulator complement(867614..868531) Ralstonia pickettii 12J 6285354 YP_001893059.1 CDS Rpic_4542 NC_010678.1 868652 870982 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 868652..870982 Ralstonia pickettii 12J 6285857 YP_001893060.1 CDS Rpic_4543 NC_010678.1 871099 874200 R PFAM: acriflavin resistance protein; KEGG: rso:RS01779 probable transporter lipoprotein transmembrane; acriflavin resistance protein complement(871099..874200) Ralstonia pickettii 12J 6285006 YP_001893061.1 CDS Rpic_4544 NC_010678.1 874197 875336 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS01779 probable transporter lipoprotein transmembrane; RND family efflux transporter MFP subunit complement(874197..875336) Ralstonia pickettii 12J 6284890 YP_001893062.1 CDS Rpic_4545 NC_010678.1 875333 876910 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS01780 probable outer membrane channel lipoprotein; NodT family RND efflux system outer membrane lipoprotein complement(875333..876910) Ralstonia pickettii 12J 6285452 YP_001893063.1 CDS Rpic_4546 NC_010678.1 877043 877198 R KEGG: pmy:Pmen_0312 hypothetical protein; hypothetical protein complement(877043..877198) Ralstonia pickettii 12J 6285798 YP_001893064.1 CDS Rpic_4547 NC_010678.1 877385 878266 D PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: rso:RS01781 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 877385..878266 Ralstonia pickettii 12J 6284958 YP_001893065.1 CDS Rpic_4548 NC_010678.1 878353 879567 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS01782 CynX-related transport transmembrane protein; major facilitator superfamily protein 878353..879567 Ralstonia pickettii 12J 6285814 YP_001893066.1 CDS Rpic_4549 NC_010678.1 879578 880144 R KEGG: rso:RSp0666 probable DNA-3-methyladenine glycosylase I protein; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(879578..880144) Ralstonia pickettii 12J 6286006 YP_001893067.1 CDS Rpic_4550 NC_010678.1 880156 881127 R PFAM: Mg2 transporter protein CorA family protein; KEGG: rso:RS01784 probable magnesium and cobalt transport transmembrane protein; Mg2 transporter protein CorA family protein complement(880156..881127) Ralstonia pickettii 12J 6285889 YP_001893068.1 CDS Rpic_4551 NC_010678.1 881146 881643 R PFAM: regulatory protein MarR; KEGG: rso:RS01785 probable transcription regulator protein; MarR family transcriptional regulator complement(881146..881643) Ralstonia pickettii 12J 6284977 YP_001893069.1 CDS Rpic_4552 NC_010678.1 881706 883298 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS01786 probable transport transmembrane protein; major facilitator superfamily protein complement(881706..883298) Ralstonia pickettii 12J 6285993 YP_001893070.1 CDS Rpic_4553 NC_010678.1 883487 886072 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(883487..886072) Ralstonia pickettii 12J 6285982 YP_001893071.1 CDS Rpic_4554 NC_010678.1 886445 886738 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bam:Bamb_6274 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 886445..886738 Ralstonia pickettii 12J 6285584 YP_001893072.1 CDS Rpic_4555 NC_010678.1 886852 887796 R KEGG: reh:H16_B0303 permease of drug/metabolite transporter; hypothetical protein complement(886852..887796) Ralstonia pickettii 12J 6285717 YP_001893073.1 CDS Rpic_4556 NC_010678.1 887919 888797 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_5852 LysR family transcriptional regulator; LysR family transcriptional regulator complement(887919..888797) Ralstonia pickettii 12J 6285288 YP_001893074.1 CDS Rpic_4557 NC_010678.1 888895 890478 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 888895..890478 Ralstonia pickettii 12J 6285431 YP_001893075.1 CDS Rpic_4558 NC_010678.1 890499 893081 D KEGG: aav:Aave_4033 hypothetical protein; hypothetical protein 890499..893081 Ralstonia pickettii 12J 6285326 YP_001893076.1 CDS Rpic_4559 NC_010678.1 893148 894335 D PFAM: acyltransferase 3; KEGG: rso:RS03732 acyltransferase transmembrane protein; acyltransferase 3 893148..894335 Ralstonia pickettii 12J 6285489 YP_001893077.1 CDS Rpic_4560 NC_010678.1 894325 895143 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rme:Rmet_3846 methyltransferase type 11; type 11 methyltransferase complement(894325..895143) Ralstonia pickettii 12J 6285718 YP_001893078.1 CDS Rpic_4562 NC_010678.1 895854 896477 D PFAM: regulatory protein TetR; KEGG: rso:RS03754 probable transcription regulator protein; TetR family transcriptional regulator 895854..896477 Ralstonia pickettii 12J 6285929 YP_001893079.1 CDS Rpic_4563 NC_010678.1 896462 897556 R TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rso:RSp0608 probable ferredoxin reductase protein; phenylacetate-CoA oxygenase/reductase subunit PaaK complement(896462..897556) Ralstonia pickettii 12J 6285192 YP_001893080.1 CDS Rpic_4564 NC_010678.1 897566 898117 R TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: rso:RSp0607 probable phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaJ complement(897566..898117) Ralstonia pickettii 12J 6285661 YP_001893081.1 CDS Rpic_4565 NC_010678.1 898111 898911 R TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: rso:RSp0606 probable phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaI complement(898111..898911) Ralstonia pickettii 12J 6285990 YP_001893082.1 CDS paaB NC_010678.1 898921 899208 R with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB complement(898921..899208) Ralstonia pickettii 12J 6285365 YP_001893083.1 CDS paaA NC_010678.1 899225 900244 R with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA complement(899225..900244) Ralstonia pickettii 12J 6285221 YP_001893084.1 CDS Rpic_4568 NC_010678.1 900389 901837 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB2411 transmembrane efflux protein; EmrB/QacA subfamily drug resistance transporter complement(900389..901837) Ralstonia pickettii 12J 6285691 YP_001893085.1 CDS Rpic_4569 NC_010678.1 901937 902368 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: rso:RSp0601 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase complement(901937..902368) Ralstonia pickettii 12J 6284946 YP_001893086.1 CDS Rpic_4570 NC_010678.1 902517 902900 R KEGG: rso:RS03879 hypothetical protein; Ketosteroid isomerase-like protein complement(902517..902900) Ralstonia pickettii 12J 6285098 YP_001893087.1 CDS Rpic_4571 NC_010678.1 903022 903666 D PFAM: regulatory protein TetR; KEGG: rso:RS03880 transcription regulator protein; TetR family transcriptional regulator 903022..903666 Ralstonia pickettii 12J 6285650 YP_001893088.1 CDS Rpic_4572 NC_010678.1 903743 904264 D KEGG: reu:Reut_B4200 probable transmembrane protein; hypothetical protein 903743..904264 Ralstonia pickettii 12J 6285837 YP_001893089.1 CDS Rpic_4573 NC_010678.1 904319 905269 R PFAM: response regulator receiver; CheW domain protein; KEGG: rso:RS03881 response regulator transcription regulator protein; chemotaxis protein CheW complement(904319..905269) Ralstonia pickettii 12J 6284972 YP_001893090.1 CDS Rpic_4575 NC_010678.1 906009 907307 R KEGG: bmu:Bmul_4742 hypothetical protein; hypothetical protein complement(906009..907307) Ralstonia pickettii 12J 6285930 YP_001893091.1 CDS Rpic_4576 NC_010678.1 907304 908341 R SMART: AAA ATPase; KEGG: bmu:Bmul_4741 AAA ATPase; ATPase AAA complement(907304..908341) Ralstonia pickettii 12J 6285208 YP_001893092.1 CDS Rpic_4577 NC_010678.1 908351 911053 R PFAM: Integrase catalytic region; TnsA endonuclease; KEGG: bmu:Bmul_4740 integrase catalytic region; integrase catalytic subunit complement(908351..911053) Ralstonia pickettii 12J 6285134 YP_001893093.1 CDS Rpic_4578 NC_010678.1 911202 911501 D KEGG: bmu:Bmul_4739 hypothetical protein; hypothetical protein 911202..911501 Ralstonia pickettii 12J 6285007 YP_001893094.1 CDS Rpic_4579 NC_010678.1 911565 912053 R KEGG: rme:Rmet_5460 hypothetical protein; hypothetical protein complement(911565..912053) Ralstonia pickettii 12J 6285983 YP_001893095.1 CDS Rpic_4580 NC_010678.1 912336 912725 D KEGG: rme:Rmet_5461 hypothetical protein; hypothetical protein 912336..912725 Ralstonia pickettii 12J 6285972 YP_001893096.1 CDS Rpic_4581 NC_010678.1 913000 913329 R KEGG: bvi:Bcep1808_0165 hypothetical protein; hypothetical protein complement(913000..913329) Ralstonia pickettii 12J 6285947 YP_001893097.1 CDS Rpic_4582 NC_010678.1 913687 913839 R hypothetical protein complement(913687..913839) Ralstonia pickettii 12J 6285544 YP_001893098.1 CDS Rpic_4583 NC_010678.1 914093 914383 R KEGG: bps:BPSL0566 hypothetical protein; hypothetical protein complement(914093..914383) Ralstonia pickettii 12J 6285152 YP_001893099.1 CDS Rpic_4584 NC_010678.1 914690 915703 R hypothetical protein complement(914690..915703) Ralstonia pickettii 12J 6285171 YP_001893100.1 CDS Rpic_4585 NC_010678.1 915706 916713 R hypothetical protein complement(915706..916713) Ralstonia pickettii 12J 6285209 YP_001893101.1 CDS Rpic_4587 NC_010678.1 918105 918830 R PFAM: 17 kDa surface antigen; KEGG: rso:RSc1027 probable transmembrane protein; 17 kDa surface antigen complement(918105..918830) Ralstonia pickettii 12J 6285933 YP_001893102.1 CDS Rpic_4588 NC_010678.1 919197 919400 R KEGG: bam:Bamb_3903 hypothetical protein; hypothetical protein complement(919197..919400) Ralstonia pickettii 12J 6285125 YP_001893103.1 CDS Rpic_4589 NC_010678.1 920374 920766 D KEGG: mpt:Mpe_A1934 hypothetical protein; hypothetical protein 920374..920766 Ralstonia pickettii 12J 6285048 YP_001893104.1 CDS Rpic_4590 NC_010678.1 920934 921584 D hypothetical protein 920934..921584 Ralstonia pickettii 12J 6285008 YP_001893105.1 CDS Rpic_4591 NC_010678.1 921848 922150 R KEGG: rme:Rmet_5463 hypothetical protein; hypothetical protein complement(921848..922150) Ralstonia pickettii 12J 6285804 YP_001893106.1 CDS Rpic_4592 NC_010678.1 922432 923190 R PFAM: protein of unknown function DUF347; KEGG: rme:Rmet_4979 protein of unknown function DUF347; hypothetical protein complement(922432..923190) Ralstonia pickettii 12J 6285158 YP_001893107.1 CDS Rpic_4594 NC_010678.1 923899 925212 D PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3934 major facilitator superfamily MFS_1; major facilitator superfamily protein 923899..925212 Ralstonia pickettii 12J 6284876 YP_001893108.1 CDS Rpic_4595 NC_010678.1 925330 925890 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rfr:Rfer_3389 alkylhydroperoxidase; alkylhydroperoxidase complement(925330..925890) Ralstonia pickettii 12J 6285047 YP_001893109.1 CDS Rpic_4596 NC_010678.1 925934 926182 R KEGG: slo:Shew_3761 hypothetical protein; hypothetical protein complement(925934..926182) Ralstonia pickettii 12J 6285154 YP_001893110.1 CDS Rpic_4597 NC_010678.1 926216 926767 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: shl:Shal_3552 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit complement(926216..926767) Ralstonia pickettii 12J 6285190 YP_001893111.1 CDS Rpic_4598 NC_010678.1 926771 926980 R KEGG: nar:Saro_3962 hypothetical protein; hypothetical protein complement(926771..926980) Ralstonia pickettii 12J 6285778 YP_001893112.1 CDS Rpic_4599 NC_010678.1 927086 927526 R KEGG: eba:ebA6447 hypothetical protein; hypothetical protein complement(927086..927526) Ralstonia pickettii 12J 6285118 YP_001893113.1 CDS Rpic_4600 NC_010678.1 927639 928367 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bbt:BBta_3390 cytochrome c-type biogenesis protein; cytochrome c biogenesis protein transmembrane region complement(927639..928367) Ralstonia pickettii 12J 6285439 YP_001893114.1 CDS Rpic_4601 NC_010678.1 928367 928753 R PFAM: Thioredoxin domain; KEGG: bbt:BBta_3389 thioredoxin (H-type,TRX-H); Thioredoxin domain complement(928367..928753) Ralstonia pickettii 12J 6286004 YP_001893115.1 CDS Rpic_4602 NC_010678.1 928937 929176 D hypothetical protein 928937..929176 Ralstonia pickettii 12J 6285121 YP_001893116.1 CDS Rpic_4603 NC_010678.1 929146 929874 D KEGG: rfr:Rfer_1599 hypothetical protein; hypothetical protein 929146..929874 Ralstonia pickettii 12J 6285374 YP_001893117.1 CDS Rpic_4604 NC_010678.1 930187 931086 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: net:Neut_0707 LysR family transcriptional regulator protein; LysR family transcriptional regulator complement(930187..931086) Ralstonia pickettii 12J 6285042 YP_001893118.1 CDS Rpic_4605 NC_010678.1 931152 931718 D hypothetical protein 931152..931718 Ralstonia pickettii 12J 6285833 YP_001893119.1 CDS Rpic_4607 NC_010678.1 932054 932422 D PFAM: copper resistance protein CopC; KEGG: bte:BTH_II1957 copper resistance protein; copper resistance protein CopC 932054..932422 Ralstonia pickettii 12J 6285934 YP_001893120.1 CDS Rpic_4608 NC_010678.1 932422 933366 D PFAM: copper resistance D domain protein; KEGG: bpl:BURPS1106A_A0625 copper resistance protein D; copper resistance D domain-containing protein 932422..933366 Ralstonia pickettii 12J 6286012 YP_001893121.1 CDS Rpic_4609 NC_010678.1 933578 935938 D KEGG: bvi:Bcep1808_3972 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 933578..935938 Ralstonia pickettii 12J 6285187 YP_001893122.1 CDS dsbG NC_010678.1 936293 937123 R Involved in disulfide bond formation; disulfide isomerase/thiol-disulfide oxidase complement(936293..937123) Ralstonia pickettii 12J 6285024 YP_001893123.1 CDS Rpic_4611 NC_010678.1 937217 938332 D PFAM: regulatory protein TetR; KEGG: pfo:Pfl_2955 TetR family transcriptional regulator; TetR family transcriptional regulator 937217..938332 Ralstonia pickettii 12J 6285138 YP_001893124.1 CDS Rpic_4612 NC_010678.1 938591 940423 D PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: bxe:Bxe_A4283 diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 938591..940423 Ralstonia pickettii 12J 6285663 YP_001893125.1 CDS Rpic_4613 NC_010678.1 940699 942123 D PFAM: phosphoesterase; KEGG: bmu:Bmul_6095 phosphoesterase; phospholipase C 940699..942123 Ralstonia pickettii 12J 6285132 YP_001893126.1 CDS Rpic_4614 NC_010678.1 942127 943341 D PFAM: phosphoesterase; KEGG: nca:Noca_3200 phosphoesterase; phosphoesterase 942127..943341 Ralstonia pickettii 12J 6285998 YP_001893127.1 CDS Rpic_4615 NC_010678.1 943496 944722 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bxe:Bxe_B0092 chromate transporter; chromate ion transporter family chromate transporter 943496..944722 Ralstonia pickettii 12J 6285123 YP_001893128.1 CDS Rpic_4616 NC_010678.1 944985 945176 R TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: reu:Reut_B5693 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(944985..945176) Ralstonia pickettii 12J 6285359 YP_001893129.1 CDS Rpic_4617 NC_010678.1 945221 946267 R catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase complement(945221..946267) Ralstonia pickettii 12J 6285168 YP_001893130.1 CDS Rpic_4618 NC_010678.1 946281 947216 R catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase complement(946281..947216) Ralstonia pickettii 12J 6285169 YP_001893131.1 CDS Rpic_4619 NC_010678.1 947254 948045 R KEGG: reu:Reut_B5692 4-oxalocrotonate decarboxylase; TIGRFAM: 4-oxalocrotonate decarboxylase; PFAM: Hydratase/decarboxylase; 4-oxalocrotonate decarboxylase complement(947254..948045) Ralstonia pickettii 12J 6285219 YP_001893132.1 CDS Rpic_4620 NC_010678.1 948075 948857 R KEGG: reu:Reut_B5691 4-oxalocrotonate decarboxylase; TIGRFAM: 2-oxopent-4-enoate hydratase; PFAM: Hydratase/decarboxylase; 2-oxopent-4-enoate hydratase complement(948075..948857) Ralstonia pickettii 12J 6285456 YP_001893133.1 CDS Rpic_4621 NC_010678.1 948883 949734 R PFAM: alpha/beta hydrolase fold; KEGG: reu:Reut_B5690 alpha/beta hydrolase fold; alpha/beta hydrolase complement(948883..949734) Ralstonia pickettii 12J 6285218 YP_001893134.1 CDS Rpic_4622 NC_010678.1 949731 951185 R TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: reu:Reut_B5689 betaine-aldehyde dehydrogenase; 2-hydroxymuconic semialdehyde dehydrogenase complement(949731..951185) Ralstonia pickettii 12J 6285189 YP_001893135.1 CDS Rpic_4623 NC_010678.1 951235 951687 R PFAM: protein of unknown function DUF336; KEGG: reu:Reut_B5688 protein of unknown function DUF336; hypothetical protein complement(951235..951687) Ralstonia pickettii 12J 6285003 YP_001893136.1 CDS Rpic_4624 NC_010678.1 951746 952690 R TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reu:Reut_B5687 catechol 2,3-dioxygenase; catechol 2,3 dioxygenase complement(951746..952690) Ralstonia pickettii 12J 6285020 YP_001893137.1 CDS Rpic_4625 NC_010678.1 952714 953079 R PFAM: ferredoxin; KEGG: reu:Reut_B5686 ferredoxin; ferredoxin complement(952714..953079) Ralstonia pickettii 12J 6285312 YP_001893138.1 CDS Rpic_4626 NC_010678.1 953095 954159 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5685 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; oxidoreductase FAD-binding domain-containing protein complement(953095..954159) Ralstonia pickettii 12J 6285668 YP_001893139.1 CDS Rpic_4627 NC_010678.1 954163 954528 R PFAM: phenol hydroxylase conserved region; KEGG: reu:Reut_B5684 phenol hydroxylase conserved region; phenol hydroxylase complement(954163..954528) Ralstonia pickettii 12J 6285235 YP_001893140.1 CDS Rpic_4628 NC_010678.1 954525 956069 R PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: reu:Reut_B5683 methane/phenol/toluene hydroxylase:YHS; methane/phenol/toluene hydroxylase complement(954525..956069) Ralstonia pickettii 12J 6285153 YP_001893141.1 CDS Rpic_4629 NC_010678.1 956115 956384 R PFAM: monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5682 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM complement(956115..956384) Ralstonia pickettii 12J 6285888 YP_001893142.1 CDS Rpic_4630 NC_010678.1 956420 957427 R PFAM: methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5681 methane/phenol/toluene hydroxylase; phenol 2-monooxygenase complement(956420..957427) Ralstonia pickettii 12J 6285167 YP_001893143.1 CDS Rpic_4631 NC_010678.1 957483 957692 R PFAM: phenol hydroxylase subunit; KEGG: reu:Reut_B5680 phenol hydroxylase subunit; phenol hydroxylase subunit complement(957483..957692) Ralstonia pickettii 12J 6285181 YP_001893144.1 CDS Rpic_4632 NC_010678.1 958407 959912 D PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: reu:Reut_B5679 methane/phenol/toluene hydroxylase:YHS; methane/phenol/toluene hydroxylase 958407..959912 Ralstonia pickettii 12J 6285653 YP_001893145.1 CDS Rpic_4633 NC_010678.1 959937 960197 D PFAM: Toluene-4-monooxygenase system B; KEGG: reu:Reut_B5678 toluene-4-monooxygenase system B; Toluene-4-monooxygenase system B 959937..960197 Ralstonia pickettii 12J 6285879 YP_001893146.1 CDS Rpic_4634 NC_010678.1 960205 960540 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: reu:Reut_B5677 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 960205..960540 Ralstonia pickettii 12J 6285055 YP_001893147.1 CDS Rpic_4635 NC_010678.1 960560 960874 D PFAM: monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5676 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 960560..960874 Ralstonia pickettii 12J 6285874 YP_001893148.1 CDS Rpic_4636 NC_010678.1 960887 961876 D PFAM: methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5675 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 960887..961876 Ralstonia pickettii 12J 6285500 YP_001893149.1 CDS Rpic_4637 NC_010678.1 961914 962945 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5674 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; oxidoreductase FAD-binding domain-containing protein 961914..962945 Ralstonia pickettii 12J 6285166 YP_001893150.1 CDS Rpic_4638 NC_010678.1 963199 964977 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; SMART: AAA ATPase; KEGG: reu:Reut_B5673 helix-turn-helix, fis-type; sigma-54 specific transcriptional regulator 963199..964977 Ralstonia pickettii 12J 6285955 YP_001893151.1 CDS Rpic_4639 NC_010678.1 965041 966417 R PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: reu:Reut_B5672 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein complement(965041..966417) Ralstonia pickettii 12J 6286011 YP_001893152.1 CDS Rpic_4640 NC_010678.1 966863 968557 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; SMART: AAA ATPase; KEGG: reu:Reut_B5671 helix-turn-helix, fis-type; sigma-54 specific transcriptional regulator 966863..968557 Ralstonia pickettii 12J 6285912 YP_001893153.1 CDS Rpic_4641 NC_010678.1 968554 969303 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_B5670 regulatory protein GntR, HTH:GntR, C-terminal; GntR family transcriptional regulator 968554..969303 Ralstonia pickettii 12J 6285160 YP_001893154.1 CDS Rpic_4642 NC_010678.1 969388 972048 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sen:SACE_2432 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha complement(969388..972048) Ralstonia pickettii 12J 6285180 YP_001893155.1 CDS Rpic_4643 NC_010678.1 972036 973478 R PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: swi:Swit_1474 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) complement(972036..973478) Ralstonia pickettii 12J 6285165 YP_001893156.1 CDS Rpic_4644 NC_010678.1 973724 975490 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 973724..975490 Ralstonia pickettii 12J 6285173 YP_001893157.1 CDS Rpic_4645 NC_010678.1 975487 976512 D KEGG: bte:BTH_II0928 probable pyruvate dehydrogenase, E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 975487..976512 Ralstonia pickettii 12J 6285234 YP_001893158.1 CDS Rpic_4646 NC_010678.1 976509 977492 D PFAM: transketolase; Transketolase domain protein; KEGG: bte:BTH_II0929 pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase beta subunit; transketolase 976509..977492 Ralstonia pickettii 12J 6285394 YP_001893159.1 CDS Rpic_4647 NC_010678.1 977530 978657 D PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: bte:BTH_II0930 probable pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase; branched-chain alpha-keto acid dehydrogenase E2 subunit 977530..978657 Ralstonia pickettii 12J 6285704 YP_001893160.1 CDS Rpic_4648 NC_010678.1 978654 978923 D KEGG: bte:BTH_II0931 hypothetical protein; hypothetical protein 978654..978923 Ralstonia pickettii 12J 6285170 YP_001893161.1 CDS Rpic_4649 NC_010678.1 978978 979406 R KEGG: bpm:BURPS1710b_2475 RedA; hypothetical protein complement(978978..979406) Ralstonia pickettii 12J 6285141 YP_001893162.1 CDS Rpic_4650 NC_010678.1 979488 980888 R KEGG: reu:Reut_A1215 PAS; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(979488..980888) Ralstonia pickettii 12J 6285130 YP_001893163.1 CDS Rpic_4651 NC_010678.1 981255 981593 D KEGG: bte:BTH_I2124 sigma 54 modulation protein; sigma 54 modulation protein 981255..981593 Ralstonia pickettii 12J 6285202 YP_001893164.1 CDS Rpic_4652 NC_010678.1 981597 981836 D hypothetical protein 981597..981836 Ralstonia pickettii 12J 6285443 YP_001893165.1 CDS Rpic_4653 NC_010678.1 982190 983827 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: reh:H16_A1997 chaperonin GroEL (HSP60 family); chaperonin GroEL 982190..983827 Ralstonia pickettii 12J 6285517 YP_001893166.1 CDS Rpic_4654 NC_010678.1 983869 985230 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 983869..985230 Ralstonia pickettii 12J 6285864 YP_001893167.1 CDS Rpic_4655 NC_010678.1 985338 986009 R Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein complement(985338..986009) Ralstonia pickettii 12J 6285476 YP_001893168.1 CDS Rpic_4656 NC_010678.1 986174 987709 D Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 986174..987709 Ralstonia pickettii 12J 6285410 YP_001893169.1 CDS Rpic_4657 NC_010678.1 987896 989947 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 987896..989947 Ralstonia pickettii 12J 6285095 YP_001893170.1 CDS Rpic_4658 NC_010678.1 989944 990120 D KEGG: rso:RS02295 hypothetical protein; hypothetical protein 989944..990120 Ralstonia pickettii 12J 6285641 YP_001893171.1 CDS Rpic_4659 NC_010678.1 990083 990796 D TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: rso:RSp0965 ribonucleotide reductase activating transmembrane protein; anaerobic ribonucleoside-triphosphate reductase activating protein 990083..990796 Ralstonia pickettii 12J 6284905 YP_001893172.1 CDS Rpic_4660 NC_010678.1 990801 991478 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rso:RS02297 probable transcription regulator protein; Crp/Fnr family transcriptional regulator 990801..991478 Ralstonia pickettii 12J 6284920 YP_001893173.1 CDS Rpic_4661 NC_010678.1 991575 992000 R PFAM: DGC domain protein; KEGG: rso:RS02298 lipoprotein; DGC domain-containing protein complement(991575..992000) Ralstonia pickettii 12J 6284922 YP_001893174.1 CDS Rpic_4662 NC_010678.1 992033 992449 R KEGG: rso:RS02299 hypothetical protein; hypothetical protein complement(992033..992449) Ralstonia pickettii 12J 6284934 YP_001893175.1 CDS Rpic_4663 NC_010678.1 992446 993330 R PFAM: peptidase U32; KEGG: rso:RS02300 hypothetical protein; peptidase U32 complement(992446..993330) Ralstonia pickettii 12J 6284942 YP_001893176.1 CDS Rpic_4664 NC_010678.1 993341 994357 R PFAM: peptidase U32; KEGG: rso:RS02301 probable protease protein; peptidase U32 complement(993341..994357) Ralstonia pickettii 12J 6284954 YP_001893177.1 CDS Rpic_4665 NC_010678.1 994402 995685 R KEGG: rso:RS02303 probable transmembrane protein; hypothetical protein complement(994402..995685) Ralstonia pickettii 12J 6284974 YP_001893178.1 CDS Rpic_4666 NC_010678.1 995921 997237 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0972 nitrite/nitrate transporter transmembrane protein; major facilitator superfamily protein 995921..997237 Ralstonia pickettii 12J 6284978 YP_001893179.1 CDS Rpic_4667 NC_010678.1 997287 998672 D TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0973 probable nitrite/nitrate transporter transmembrane protein; nitrite transporter 997287..998672 Ralstonia pickettii 12J 6284981 YP_001893180.1 CDS Rpic_4668 NC_010678.1 998685 999353 R PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein; hypothetical protein complement(998685..999353) Ralstonia pickettii 12J 6284982 YP_001893181.1 CDS Rpic_4669 NC_010678.1 999638 1003375 D TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rso:RSp0974 probable respiratory nitrate reductase alpha chain oxidoreductase protein; nitrate reductase subunit alpha 999638..1003375 Ralstonia pickettii 12J 6284983 YP_001893182.1 CDS Rpic_4670 NC_010678.1 1003372 1004916 D TIGRFAM: nitrate reductase, beta subunit; KEGG: rso:RSp0975 probable respiratory nitrate reductase oxidoreductase protein; nitrate reductase subunit beta 1003372..1004916 Ralstonia pickettii 12J 6284985 YP_001893183.1 CDS Rpic_4671 NC_010678.1 1004934 1005635 D TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: rso:RSp0976 respiratory nitrate reductase oxidoreductase protein; nitrate reductase molybdenum cofactor assembly chaperone 1004934..1005635 Ralstonia pickettii 12J 6284987 YP_001893184.1 CDS Rpic_4672 NC_010678.1 1005632 1006315 D KEGG: rso:RSp0977 probable respiratory nitrate reductase transmembrane protein; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase subunit gamma 1005632..1006315 Ralstonia pickettii 12J 6285325 YP_001893185.1 CDS Rpic_4673 NC_010678.1 1006317 1006838 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: rso:RSp0978 probable molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein MobB 1006317..1006838 Ralstonia pickettii 12J 6284990 YP_001893186.1 CDS Rpic_4674 NC_010678.1 1006900 1008855 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rso:RSp0979 transmembrane nitrate/nitrite sensor kinase transcription regulator protein; multi-sensor signal transduction histidine kinase 1006900..1008855 Ralstonia pickettii 12J 6284991 YP_001893187.1 CDS Rpic_4675 NC_010678.1 1008883 1009539 D PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: rso:RSp0980 probable nitrate/nitrite response regulator transcription regulator protein; LuxR family two component transcriptional regulator 1008883..1009539 Ralstonia pickettii 12J 6284992 YP_001893188.1 CDS Rpic_4676 NC_010678.1 1009749 1010891 D PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: rso:RSc3159 hypothetical protein; methyltransferase small 1009749..1010891 Ralstonia pickettii 12J 6284997 YP_001893189.1 CDS Rpic_4677 NC_010678.1 1010878 1012146 R PFAM: HI0933 family protein; KEGG: rso:RSc3158 transmembrane protein; hypothetical protein complement(1010878..1012146) Ralstonia pickettii 12J 6285011 YP_001893190.1 CDS Rpic_4678 NC_010678.1 1012366 1013202 D KEGG: rso:RSc3157 hypothetical protein; hypothetical protein 1012366..1013202 Ralstonia pickettii 12J 6285025 YP_001893191.1 CDS Rpic_4679 NC_010678.1 1013251 1014723 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B1745 diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(1013251..1014723) Ralstonia pickettii 12J 6285026 YP_001893192.1 CDS Rpic_4680 NC_010678.1 1015286 1017502 D PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: rso:RS00411 aminopeptidase transmembrane protein; Peptidase M1 membrane alanine aminopeptidase 1015286..1017502 Ralstonia pickettii 12J 6285032 YP_001893193.1 CDS Rpic_4681 NC_010678.1 1017619 1017942 R PFAM: nitrogen regulatory protein P-II; KEGG: rso:RS00410 probable P-II-related protein transcription regulator; nitrogen regulatory protein P-II complement(1017619..1017942) Ralstonia pickettii 12J 6285034 YP_001893194.1 CDS Rpic_4682 NC_010678.1 1017939 1021088 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rso:RS00409 cation efflux system transmembrane protein; CzcA family heavy metal efflux pump complement(1017939..1021088) Ralstonia pickettii 12J 6285035 YP_001893195.1 CDS Rpic_4683 NC_010678.1 1021085 1022305 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS00408 cation efflux protein; RND family efflux transporter MFP subunit complement(1021085..1022305) Ralstonia pickettii 12J 6285040 YP_001893196.1 CDS Rpic_4684 NC_010678.1 1022302 1023648 R PFAM: outer membrane efflux protein; KEGG: rso:RS00407 outer membrane cation efflux system protein; outer membrane efflux protein complement(1022302..1023648) Ralstonia pickettii 12J 6285041 YP_001893197.1 CDS Rpic_4685 NC_010678.1 1023762 1024289 R KEGG: rso:RS00406 probable transmembrane protein; hypothetical protein complement(1023762..1024289) Ralstonia pickettii 12J 6285043 YP_001893198.1 CDS Rpic_4686 NC_010678.1 1024341 1025837 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RS00403 probable transmembrane sensor histidine kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase complement(1024341..1025837) Ralstonia pickettii 12J 6285050 YP_001893199.1 CDS Rpic_4687 NC_010678.1 1025834 1026499 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS00402 two component response regulator transcription regulator protein; winged helix family two component transcriptional regulator complement(1025834..1026499) Ralstonia pickettii 12J 6285051 YP_001893200.1 CDS Rpic_4688 NC_010678.1 1027087 1028103 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rso:RS00398 hypothetical protein; diguanylate cyclase 1027087..1028103 Ralstonia pickettii 12J 6284883 YP_001893201.1 CDS Rpic_4689 NC_010678.1 1028157 1029281 D PFAM: MscS Mechanosensitive ion channel; KEGG: rso:RS00392 probable transmembrane protein; mechanosensitive ion channel protein MscS 1028157..1029281 Ralstonia pickettii 12J 6285058 YP_001893202.1 CDS Rpic_4690 NC_010678.1 1029278 1030162 R KEGG: rso:RS05802 transmembrane protein; hypothetical protein complement(1029278..1030162) Ralstonia pickettii 12J 6285059 YP_001893203.1 CDS Rpic_4691 NC_010678.1 1030165 1031883 R KEGG: rso:RS00391 hypothetical protein; hypothetical protein complement(1030165..1031883) Ralstonia pickettii 12J 6285065 YP_001893204.1 CDS Rpic_4692 NC_010678.1 1031898 1032122 R KEGG: rso:RS00390 hypothetical signal peptide protein; hypothetical protein complement(1031898..1032122) Ralstonia pickettii 12J 6284925 YP_001893205.1 CDS Rpic_4693 NC_010678.1 1032358 1033620 R PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rso:RSp0510 probable UDP-N-acetylglucosamine 2-epimerase protein; UDP-N-acetylglucosamine 2-epimerase complement(1032358..1033620) Ralstonia pickettii 12J 6285066 YP_001893206.1 CDS Rpic_4694 NC_010678.1 1033868 1035592 R KEGG: rso:RS00388 hypothetical signal peptide protein; hypothetical protein complement(1033868..1035592) Ralstonia pickettii 12J 6285073 YP_001893207.1 CDS nfrB NC_010678.1 1035589 1037700 R PFAM: General secretory system II protein E domain protein; KEGG: rso:RSp0508 bacteriophage N4 adsorption protein B; bacteriophage N4 adsorption protein B complement(1035589..1037700) Ralstonia pickettii 12J 6285082 YP_001893208.1 CDS Rpic_4696 NC_010678.1 1038424 1040250 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rso:RSp0507 probable methyl-accepting chemotaxis I MCP-I serine chemoreceptor protein transmembrane; methyl-accepting chemotaxis sensory transducer complement(1038424..1040250) Ralstonia pickettii 12J 6285090 YP_001893209.1 CDS Rpic_4697 NC_010678.1 1040340 1041050 R PFAM: 17 kDa surface antigen; KEGG: rso:RS00385 glycin-rich transmembrane protein; 17 kDa surface antigen complement(1040340..1041050) Ralstonia pickettii 12J 6285093 YP_001893210.1 CDS Rpic_4698 NC_010678.1 1041306 1042238 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rso:RSp0505 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 1041306..1042238 Ralstonia pickettii 12J 6285094 YP_001893211.1 CDS Rpic_4699 NC_010678.1 1042280 1043536 R PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc1750 probable Leu/Ile/Val-binding precursor signal peptide protein; extracellular ligand-binding receptor complement(1042280..1043536) Ralstonia pickettii 12J 6285097 YP_001893212.1 CDS Rpic_4700 NC_010678.1 1043789 1044442 D PFAM: regulatory protein TetR; KEGG: dar:Daro_3251 regulatory protein, TetR; TetR family transcriptional regulator 1043789..1044442 Ralstonia pickettii 12J 6285100 YP_001893213.1 CDS Rpic_4702 NC_010678.1 1046001 1046435 D PFAM: histidine triad (HIT) protein; KEGG: rso:RSp0494 HIT-like protein; histidine triad (HIT) protein 1046001..1046435 Ralstonia pickettii 12J 6285935 YP_001893214.1 CDS Rpic_4703 NC_010678.1 1046609 1046971 R KEGG: reh:H16_A0279 hypothetical protein; hypothetical protein complement(1046609..1046971) Ralstonia pickettii 12J 6285108 YP_001893215.1 CDS Rpic_4704 NC_010678.1 1047146 1048669 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rso:RS00365 hypothetical protein; hypothetical protein complement(1047146..1048669) Ralstonia pickettii 12J 6285111 YP_001893216.1 CDS Rpic_4705 NC_010678.1 1048849 1050267 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reh:H16_A0278 transcriptional regulator, MocR family; GntR family transcriptional regulator 1048849..1050267 Ralstonia pickettii 12J 6285117 YP_001893217.1 CDS Rpic_4706 NC_010678.1 1050350 1050805 D KEGG: rso:RS00364 hypothetical protein; hypothetical protein 1050350..1050805 Ralstonia pickettii 12J 6285083 YP_001893218.1 CDS Rpic_4707 NC_010678.1 1050910 1051689 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:bll7955 enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase complement(1050910..1051689) Ralstonia pickettii 12J 6285120 YP_001893219.1 CDS Rpic_4708 NC_010678.1 1051686 1052120 R PFAM: regulatory protein MarR; KEGG: reu:Reut_B4527 regulatory protein, MarR; MarR family transcriptional regulator complement(1051686..1052120) Ralstonia pickettii 12J 6285122 YP_001893220.1 CDS Rpic_4709 NC_010678.1 1052117 1053004 R KEGG: bam:Bamb_3867 alpha/beta hydrolase-like protein; alpha/beta hydrolase-like protein complement(1052117..1053004) Ralstonia pickettii 12J 6285030 YP_001893221.1 CDS Rpic_4710 NC_010678.1 1053121 1053477 D PFAM: regulatory protein ArsR; KEGG: rso:RSc1960 transcriptional regulatory DNA-binding transcription regulator protein; ArsR family transcriptional regulator 1053121..1053477 Ralstonia pickettii 12J 6285124 YP_001893222.1 CDS Rpic_4711 NC_010678.1 1053461 1054414 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rso:RSc1959 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 1053461..1054414 Ralstonia pickettii 12J 6285128 YP_001893223.1 CDS Rpic_4712 NC_010678.1 1054551 1055672 R catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(1054551..1055672) Ralstonia pickettii 12J 6285091 YP_001893224.1 CDS Rpic_4713 NC_010678.1 1056033 1056707 D PFAM: phosphoglycerate mutase; KEGG: bur:Bcep18194_B3039 phosphoglycerate/bisphosphoglycerate mutase; phosphoglycerate mutase 1056033..1056707 Ralstonia pickettii 12J 6285133 YP_001893225.1 CDS Rpic_4714 NC_010678.1 1056771 1057535 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_C6406 short chain dehydrogenase; short chain dehydrogenase 1056771..1057535 Ralstonia pickettii 12J 6285099 YP_001893226.1 CDS Rpic_4715 NC_010678.1 1057608 1058525 D PFAM: beta-lactamase domain protein; KEGG: reh:H16_A0853 lactamase B; beta-lactamase 1057608..1058525 Ralstonia pickettii 12J 6285135 YP_001893227.1 CDS Rpic_4716 NC_010678.1 1058638 1058910 D KEGG: rso:RS00884 hypothetical protein; hypothetical protein 1058638..1058910 Ralstonia pickettii 12J 6285146 YP_001893228.1 CDS Rpic_4717 NC_010678.1 1059131 1060363 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0412 fosmidomycin resistance antibiotic resistance transmembrane protein; major facilitator superfamily protein complement(1059131..1060363) Ralstonia pickettii 12J 6284897 YP_001893229.1 CDS Rpic_4718 NC_010678.1 1060800 1061018 D KEGG: rso:RS05307 hypothetical protein; hypothetical protein 1060800..1061018 Ralstonia pickettii 12J 6285149 YP_001893230.1 CDS Rpic_4719 NC_010678.1 1061084 1062109 R KEGG: rso:RS00868 probable transmembrane protein; hypothetical protein complement(1061084..1062109) Ralstonia pickettii 12J 6285087 YP_001893231.1 CDS Rpic_4720 NC_010678.1 1062106 1062771 R PFAM: protein of unknown function DUF1345; KEGG: rso:RS00867 probable transmembrane protein; hypothetical protein complement(1062106..1062771) Ralstonia pickettii 12J 6285150 YP_001893232.1 CDS Rpic_4721 NC_010678.1 1062849 1063154 R KEGG: rso:RS00866 hypothetical protein; hypothetical protein complement(1062849..1063154) Ralstonia pickettii 12J 6285156 YP_001893233.1 CDS Rpic_4722 NC_010678.1 1063280 1063702 R KEGG: rso:RS00831 hypothetical signal peptide protein; hypothetical protein complement(1063280..1063702) Ralstonia pickettii 12J 6285067 YP_001893234.1 CDS Rpic_4723 NC_010678.1 1064115 1064282 D KEGG: rso:RS00829 probable lipoprotein; lipoprotein 1064115..1064282 Ralstonia pickettii 12J 6285159 YP_001893235.1 CDS Rpic_4724 NC_010678.1 1064293 1064841 R PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSp0397 probable phosphinothricin acetyltransferase protein; N-acetyltransferase GCN5 complement(1064293..1064841) Ralstonia pickettii 12J 6285162 YP_001893236.1 CDS Rpic_4725 NC_010678.1 1065014 1065991 D SMART: Rhodanese domain protein; KEGG: rso:RS00824 probable transmembrane protein; rhodanese domain-containing protein 1065014..1065991 Ralstonia pickettii 12J 6285126 YP_001893237.1 CDS Rpic_4726 NC_010678.1 1066334 1067911 R PFAM: flagellar hook-length control protein; KEGG: rso:RSp0395 probable flagellar HOOK-length control protein; flagellar hook-length control protein complement(1066334..1067911) Ralstonia pickettii 12J 6285177 YP_001893238.1 CDS Rpic_4727 NC_010678.1 1067947 1068411 R TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: rso:RSp0394 probable flagellar protein; flagellar export protein FliJ complement(1067947..1068411) Ralstonia pickettii 12J 6285063 YP_001893239.1 CDS Rpic_4728 NC_010678.1 1068520 1069959 R KEGG: rso:RSp0393 probable flagellum-specific ATP synthase protein; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; flagellar protein export ATPase FliI complement(1068520..1069959) Ralstonia pickettii 12J 6285191 YP_001893240.1 CDS fliH NC_010678.1 1069949 1070686 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(1069949..1070686) Ralstonia pickettii 12J 6285194 YP_001893241.1 CDS fliG NC_010678.1 1070719 1071711 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(1070719..1071711) Ralstonia pickettii 12J 6285198 YP_001893242.1 CDS Rpic_4731 NC_010678.1 1071708 1073543 R TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: rso:RSp0390 probable flagellar M-ring transmembrane protein; flagellar M-ring protein FliF complement(1071708..1073543) Ralstonia pickettii 12J 6285200 YP_001893243.1 CDS fliE NC_010678.1 1073787 1074122 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1073787..1074122 Ralstonia pickettii 12J 6285064 YP_001893244.1 CDS Rpic_4733 NC_010678.1 1074186 1075286 D PFAM: glycosyl transferase family 2; KEGG: rso:RS00815 hypothetical protein; family 2 glycosyl transferase 1074186..1075286 Ralstonia pickettii 12J 6285204 YP_001893245.1 CDS Rpic_4734 NC_010678.1 1075297 1076070 D TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pfo:Pfl_1510 nucleotidyl transferase; glucose-1-phosphate cytidylyltransferase 1075297..1076070 Ralstonia pickettii 12J 6285222 YP_001893246.1 CDS Rpic_4735 NC_010678.1 1076070 1077161 D TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: acr:Acry_0592 CDP-glucose 4,6-dehydratase; CDP-glucose 4,6-dehydratase 1076070..1077161 Ralstonia pickettii 12J 6285223 YP_001893247.1 CDS Rpic_4736 NC_010678.1 1077158 1077751 D KEGG: dol:Dole_1961 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1077158..1077751 Ralstonia pickettii 12J 6285229 YP_001893248.1 CDS Rpic_4737 NC_010678.1 1077748 1078899 D PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:RL0240 perosamine synthetase; glutamine--scyllo-inositol transaminase 1077748..1078899 Ralstonia pickettii 12J 6285231 YP_001893249.1 CDS Rpic_4738 NC_010678.1 1078884 1079726 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: azc:AZC_3474 phytanoil-CoA alpha hydroxylase; Phytanoyl-CoA dioxygenase 1078884..1079726 Ralstonia pickettii 12J 6285233 YP_001893250.1 CDS Rpic_4739 NC_010678.1 1079729 1080904 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: azc:AZC_3475 hypothetical protein; type 12 methyltransferase 1079729..1080904 Ralstonia pickettii 12J 6285253 YP_001893251.1 CDS Rpic_4740 NC_010678.1 1080901 1081416 D PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_3472 acetyltransferase; N-acetyltransferase GCN5 1080901..1081416 Ralstonia pickettii 12J 6285254 YP_001893252.1 CDS Rpic_4741 NC_010678.1 1081413 1082126 D PFAM: WbqC-like family protein; KEGG: azc:AZC_3473 hypothetical protein; WbqC-like family protein 1081413..1082126 Ralstonia pickettii 12J 6285255 YP_001893253.1 CDS Rpic_4742 NC_010678.1 1082123 1083397 D PFAM: glycosyl transferase family 2; KEGG: azc:AZC_3476 glycosyltransferase; family 2 glycosyl transferase 1082123..1083397 Ralstonia pickettii 12J 6285264 YP_001893254.1 CDS fliE NC_010678.1 1083416 1083742 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1083416..1083742 Ralstonia pickettii 12J 6285269 YP_001893255.1 CDS Rpic_4744 NC_010678.1 1083885 1084307 D PFAM: OsmC family protein; KEGG: rru:Rru_A0476 OsmC-like protein; OsmC family protein 1083885..1084307 Ralstonia pickettii 12J 6285273 YP_001893256.1 CDS Rpic_4745 NC_010678.1 1084373 1084816 D PFAM: regulatory protein MarR; KEGG: rso:RS00814 transcription regulator protein; MarR family transcriptional regulator 1084373..1084816 Ralstonia pickettii 12J 6285275 YP_001893257.1 CDS Rpic_4746 NC_010678.1 1084803 1085897 D PFAM: glycosyl transferase family 2; KEGG: rso:RS00815 hypothetical protein; family 2 glycosyl transferase 1084803..1085897 Ralstonia pickettii 12J 6285278 YP_001893258.1 CDS Rpic_4747 NC_010678.1 1085908 1086264 R KEGG: rso:RSp0385 probable flagellar protein FliT; flagellar protein FliT complement(1085908..1086264) Ralstonia pickettii 12J 6285284 YP_001893259.1 CDS Rpic_4748 NC_010678.1 1086320 1086742 R PFAM: flagellar protein FliS; KEGG: rso:RSp0384 probable flagellar protein FliS; flagellar protein FliS complement(1086320..1086742) Ralstonia pickettii 12J 6285289 YP_001893260.1 CDS Rpic_4749 NC_010678.1 1086793 1088835 R PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: rso:RSp0383 probable flagellar HOOK-associated protein 2 (filament CAP protein); flagellar hook-associated 2 domain-containing protein complement(1086793..1088835) Ralstonia pickettii 12J 6285297 YP_001893261.1 CDS Rpic_4750 NC_010678.1 1089022 1089843 R PFAM: flagellin domain protein; KEGG: rso:RSp0382 flagellin protein; flagellin domain-containing protein complement(1089022..1089843) Ralstonia pickettii 12J 6285298 YP_001893262.1 CDS Rpic_4751 NC_010678.1 1090242 1090877 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rso:RS00809 probable transcription regulator protein; LuxR family two component transcriptional regulator 1090242..1090877 Ralstonia pickettii 12J 6285304 YP_001893263.1 CDS Rpic_4752 NC_010678.1 1090878 1092836 R KEGG: rso:RS00808 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(1090878..1092836) Ralstonia pickettii 12J 6285308 YP_001893264.1 CDS fliL NC_010678.1 1093112 1093606 D interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1093112..1093606 Ralstonia pickettii 12J 6285315 YP_001893265.1 CDS fliM NC_010678.1 1093608 1094615 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 1093608..1094615 Ralstonia pickettii 12J 6285320 YP_001893266.1 CDS Rpic_4755 NC_010678.1 1094605 1095057 D TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rso:RSp0377 probable flagellar motor switch protein FliN; flagellar motor switch protein FliN 1094605..1095057 Ralstonia pickettii 12J 6285188 YP_001893267.1 CDS Rpic_4756 NC_010678.1 1095117 1095500 D PFAM: flagellar biosynthesis protein FliO; KEGG: rso:RSp0376 probable flagellar FliO transmembrane protein; flagellar biosynthesis protein FliO 1095117..1095500 Ralstonia pickettii 12J 6285321 YP_001893268.1 CDS fliP NC_010678.1 1095497 1096246 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1095497..1096246 Ralstonia pickettii 12J 6285322 YP_001893269.1 CDS fliQ NC_010678.1 1096256 1096525 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1096256..1096525 Ralstonia pickettii 12J 6285323 YP_001893270.1 CDS Rpic_4759 NC_010678.1 1096559 1097347 D TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: rso:RSp0373 probable flagellar biosynthetic FliR transmembrane protein; flagellar biosynthetic protein FliR 1096559..1097347 Ralstonia pickettii 12J 6285246 YP_001893271.1 CDS Rpic_4760 NC_010678.1 1097864 1098466 D KEGG: rso:RS00799 hypothetical protein; hypothetical protein 1097864..1098466 Ralstonia pickettii 12J 6285327 YP_001893272.1 CDS Rpic_4761 NC_010678.1 1098451 1099257 D PFAM: phospholipid/glycerol acyltransferase; KEGG: rso:RS00796 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha transmembrane protein; phospholipid/glycerol acyltransferase 1098451..1099257 Ralstonia pickettii 12J 6285331 YP_001893273.1 CDS Rpic_4762 NC_010678.1 1099232 1099489 D KEGG: bxe:Bxe_A0928 acyl-carrier protein; acyl-carrier protein 1099232..1099489 Ralstonia pickettii 12J 6285075 YP_001893274.1 CDS Rpic_4763 NC_010678.1 1099535 1099780 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1099535..1099780 Ralstonia pickettii 12J 6285344 YP_001893275.1 CDS Rpic_4764 NC_010678.1 1099785 1100423 D KEGG: rso:RS00790 hypothetical protein; hypothetical protein 1099785..1100423 Ralstonia pickettii 12J 6285293 YP_001893276.1 CDS Rpic_4765 NC_010678.1 1100420 1102093 D PFAM: AMP-dependent synthetase and ligase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rso:RS00787 hypothetical protein; AMP-dependent synthetase and ligase 1100420..1102093 Ralstonia pickettii 12J 6285350 YP_001893277.1 CDS Rpic_4766 NC_010678.1 1102090 1103811 D PFAM: glycosyl transferase family 2; KEGG: rso:RS00785 hypothetical protein; family 2 glycosyl transferase 1102090..1103811 Ralstonia pickettii 12J 6285357 YP_001893278.1 CDS Rpic_4767 NC_010678.1 1103804 1105402 D PFAM: phenylalanine/histidine ammonia-lyase; KEGG: rso:RSp0365 probable histidine ammonia-lyase protein; histidine ammonia-lyase 1103804..1105402 Ralstonia pickettii 12J 6285360 YP_001893279.1 CDS Rpic_4768 NC_010678.1 1105389 1105823 D PFAM: thioesterase superfamily protein; KEGG: rso:RS00778 hypothetical protein; thioesterase superfamily protein 1105389..1105823 Ralstonia pickettii 12J 6285366 YP_001893280.1 CDS Rpic_4769 NC_010678.1 1105811 1106467 D KEGG: rso:RS00776 hypothetical signal peptide protein; hypothetical protein 1105811..1106467 Ralstonia pickettii 12J 6285352 YP_001893281.1 CDS Rpic_4770 NC_010678.1 1106464 1108872 D KEGG: rso:RS00775 probable lipoprotein transmembrane; lipoprotein transmembrane 1106464..1108872 Ralstonia pickettii 12J 6285248 YP_001893282.1 CDS Rpic_4771 NC_010678.1 1108869 1110050 D FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1108869..1110050 Ralstonia pickettii 12J 6285375 YP_001893283.1 CDS Rpic_4772 NC_010678.1 1110053 1110526 D PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rso:RS00772 hypothetical protein; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 1110053..1110526 Ralstonia pickettii 12J 6285376 YP_001893284.1 CDS fabG NC_010678.1 1110523 1111251 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1110523..1111251 Ralstonia pickettii 12J 6285378 YP_001893285.1 CDS Rpic_4774 NC_010678.1 1111251 1112477 D FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1111251..1112477 Ralstonia pickettii 12J 6285380 YP_001893286.1 CDS Rpic_4775 NC_010678.1 1112477 1113775 D PFAM: beta-ketoacyl synthase; KEGG: rso:RSp0357 probable 3-oxoacyl-[acyl-carrier-protein] synthase I; beta-ketoacyl synthase 1112477..1113775 Ralstonia pickettii 12J 6284909 YP_001893287.1 CDS Rpic_4776 NC_010678.1 1113772 1114206 D KEGG: rso:RS00762 hypothetical signal peptide protein; hypothetical protein 1113772..1114206 Ralstonia pickettii 12J 6285384 YP_001893288.1 CDS Rpic_4777 NC_010678.1 1114264 1114698 D KEGG: bxe:Bxe_A0943 excinuclease, ATPase subunit; excinuclease ATPase subunit 1114264..1114698 Ralstonia pickettii 12J 6285386 YP_001893289.1 CDS Rpic_4778 NC_010678.1 1114743 1115471 R PFAM: methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RS00761 hypothetical protein; type 11 methyltransferase complement(1114743..1115471) Ralstonia pickettii 12J 6285267 YP_001893290.1 CDS Rpic_4779 NC_010678.1 1115623 1116882 D PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: rso:RS00759 oxidoreductase protein; monooxygenase FAD-binding 1115623..1116882 Ralstonia pickettii 12J 6285388 YP_001893291.1 CDS Rpic_4780 NC_010678.1 1116930 1117673 R PFAM: protein of unknown function DUF1275; KEGG: rso:RS00757 probable transmembrane protein; hypothetical protein complement(1116930..1117673) Ralstonia pickettii 12J 6285405 YP_001893292.1 CDS Rpic_4781 NC_010678.1 1117736 1118695 R TIGRFAM: flagellar hook-associated protein 3; KEGG: rso:RSp0352 probable flagellar HOOK-associated protein 3; flagellar hook-associated protein 3 complement(1117736..1118695) Ralstonia pickettii 12J 6285085 YP_001893293.1 CDS flgK NC_010678.1 1118763 1120700 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(1118763..1120700) Ralstonia pickettii 12J 6285408 YP_001893294.1 CDS Rpic_4783 NC_010678.1 1120816 1121901 R KEGG: rso:RSp0350 probable flagellar protein FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ complement(1120816..1121901) Ralstonia pickettii 12J 6285411 YP_001893295.1 CDS flgI NC_010678.1 1121918 1123036 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(1121918..1123036) Ralstonia pickettii 12J 6285412 YP_001893296.1 CDS Rpic_4785 NC_010678.1 1123047 1123790 R PFAM: flagellar L-ring protein; KEGG: rso:RSp0348 probable flagellar L-ring protein precursor; flagellar L-ring protein complement(1123047..1123790) Ralstonia pickettii 12J 6285416 YP_001893297.1 CDS Rpic_4786 NC_010678.1 1123824 1124606 R TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rso:RSp0347 probable flagellar basal-body rod protein FlgG (distal rod protein); flagellar basal-body rod protein FlgG complement(1123824..1124606) Ralstonia pickettii 12J 6285417 YP_001893298.1 CDS Rpic_4787 NC_010678.1 1124643 1125380 R TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rso:RSp0346 probable flagellar basal-body rod protein FlgF; flagellar basal-body rod protein FlgF complement(1124643..1125380) Ralstonia pickettii 12J 6285432 YP_001893299.1 CDS flgE NC_010678.1 1125410 1126618 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(1125410..1126618) Ralstonia pickettii 12J 6285076 YP_001893300.1 CDS Rpic_4789 NC_010678.1 1126658 1127305 R PFAM: flagellar hook capping protein; KEGG: rso:RSp0344 probable basal-body rod modification protein FlgD; flagellar hook capping protein complement(1126658..1127305) Ralstonia pickettii 12J 6285433 YP_001893301.1 CDS Rpic_4790 NC_010678.1 1127343 1127750 R TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rso:RSp0343 probable flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC complement(1127343..1127750) Ralstonia pickettii 12J 6285436 YP_001893302.1 CDS Rpic_4791 NC_010678.1 1127908 1128363 R TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: rso:RSp0342 probable flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB complement(1127908..1128363) Ralstonia pickettii 12J 6285449 YP_001893303.1 CDS flgA NC_010678.1 1128759 1129634 D required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1128759..1129634 Ralstonia pickettii 12J 6285444 YP_001893304.1 CDS Rpic_4793 NC_010678.1 1129746 1130066 D PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: rso:RSp0340 probable negative regulator of flagellin synthesis (anti-sigma-28 factor) protein; anti-sigma-28 factor FlgM 1129746..1130066 Ralstonia pickettii 12J 6285453 YP_001893305.1 CDS Rpic_4794 NC_010678.1 1130188 1130649 D PFAM: FlgN family protein; KEGG: rso:RSp0339 probable flagella synthesis protein FlgN; FlgN family protein 1130188..1130649 Ralstonia pickettii 12J 6285251 YP_001893306.1 CDS Rpic_4795 NC_010678.1 1131133 1131798 D PFAM: regulatory protein LuxR; LexA DNA-binding domain protein; KEGG: rso:RSp0338 negative regulator of exopolysaccharide production transcription regulator protein; LuxR family two component transcriptional regulator 1131133..1131798 Ralstonia pickettii 12J 6285464 YP_001893307.1 CDS Rpic_4796 NC_010678.1 1131911 1132969 R PFAM: porin Gram-negative type; KEGG: rso:RS00714 probable porin precursor transmembrane protein; porin complement(1131911..1132969) Ralstonia pickettii 12J 6285465 YP_001893308.1 CDS Rpic_4797 NC_010678.1 1133230 1133958 R PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: rso:RS00713 probable transcription regulator protein; GntR family transcriptional regulator complement(1133230..1133958) Ralstonia pickettii 12J 6285466 YP_001893309.1 CDS Rpic_4798 NC_010678.1 1134080 1134370 R PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: rso:RS00711 HNS-like transcription regulator protein; histone family protein nucleoid-structuring protein H-NS complement(1134080..1134370) Ralstonia pickettii 12J 6285473 YP_001893310.1 CDS Rpic_4799 NC_010678.1 1135305 1137959 D KEGG: rso:RS00710 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1135305..1137959 Ralstonia pickettii 12J 6285368 YP_001893311.1 CDS Rpic_4800 NC_010678.1 1138005 1138208 R KEGG: rso:RSp0333 osmotically inducible lipoprotein B2 transmembrane; osmotically inducible lipoprotein B2 transmembrane complement(1138005..1138208) Ralstonia pickettii 12J 6285475 YP_001893312.1 CDS Rpic_4801 NC_010678.1 1138686 1140272 R Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase complement(1138686..1140272) Ralstonia pickettii 12J 6285477 YP_001893313.1 CDS Rpic_4802 NC_010678.1 1140781 1141377 R KEGG: rso:RS05439 hypothetical protein; hypothetical protein complement(1140781..1141377) Ralstonia pickettii 12J 6285294 YP_001893314.1 CDS Rpic_4803 NC_010678.1 1141377 1141811 R PFAM: OsmC family protein; KEGG: rso:RS05440 probable organic hydroperoxide resistance protein; OsmC family protein complement(1141377..1141811) Ralstonia pickettii 12J 6285488 YP_001893315.1 CDS Rpic_4804 NC_010678.1 1141931 1144174 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rso:RS05441 probable dehydrogenase, large chain oxidoreductase protein; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(1141931..1144174) Ralstonia pickettii 12J 6285279 YP_001893316.1 CDS Rpic_4805 NC_010678.1 1144194 1144652 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rso:RS05442 probable dehydrogenase, small chain oxidoreductase protein; (2Fe-2S)-binding domain-containing protein complement(1144194..1144652) Ralstonia pickettii 12J 6285493 YP_001893317.1 CDS Rpic_4806 NC_010678.1 1145298 1147010 D TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rso:RSp0322 2-isopropylmalate synthase; 2-isopropylmalate synthase 1145298..1147010 Ralstonia pickettii 12J 6285501 YP_001893318.1 CDS Rpic_4807 NC_010678.1 1147138 1147524 D PFAM: protein of unknown function DUF326; KEGG: rso:RS05446 probable cysteine-rich protein; hypothetical protein 1147138..1147524 Ralstonia pickettii 12J 6285502 YP_001893319.1 CDS Rpic_4808 NC_010678.1 1147542 1148024 D TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rso:RS05447 probable transcription regulator protein; MerR family transcriptional regulator 1147542..1148024 Ralstonia pickettii 12J 6285307 YP_001893320.1 CDS Rpic_4809 NC_010678.1 1148076 1150427 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rso:RS05448 probable metal-transporting P-type ATPase transmembrane protein; heavy metal translocating P-type ATPase complement(1148076..1150427) Ralstonia pickettii 12J 6285509 YP_001893321.1 CDS Rpic_4810 NC_010678.1 1150479 1151027 R PFAM: protein of unknown function DUF1234; KEGG: aav:Aave_0055 protein of unknown function DUF1234; hypothetical protein complement(1150479..1151027) Ralstonia pickettii 12J 6285070 YP_001893322.1 CDS Rpic_4811 NC_010678.1 1151217 1152515 D TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: psb:Psyr_2672 citrate transporter; CitMHS family citrate/H+ symporter 1151217..1152515 Ralstonia pickettii 12J 6285512 YP_001893323.1 CDS Rpic_4812 NC_010678.1 1152520 1153875 D PFAM: protein of unknown function DUF1446; KEGG: bra:BRADO1397 hypothetical protein; hypothetical protein 1152520..1153875 Ralstonia pickettii 12J 6285421 YP_001893324.1 CDS Rpic_4813 NC_010678.1 1153877 1154197 D KEGG: pol:Bpro_4170 hypothetical protein; hypothetical protein 1153877..1154197 Ralstonia pickettii 12J 6285520 YP_001893325.1 CDS Rpic_4814 NC_010678.1 1154224 1155123 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_5879 LysR family transcriptional regulator; LysR family transcriptional regulator 1154224..1155123 Ralstonia pickettii 12J 6285521 YP_001893326.1 CDS Rpic_4815 NC_010678.1 1155214 1155681 D PFAM: UspA domain protein; KEGG: rso:RS05449 hypothetical protein; UspA domain-containing protein 1155214..1155681 Ralstonia pickettii 12J 6285258 YP_001893327.1 CDS Rpic_4816 NC_010678.1 1155797 1156240 D PFAM: protein of unknown function DUF1486; KEGG: rso:RS05451 hypothetical protein; hypothetical protein 1155797..1156240 Ralstonia pickettii 12J 6285522 YP_001893328.1 CDS Rpic_4817 NC_010678.1 1156295 1157299 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RS05452 transmembrane protein; 2-nitropropane dioxygenase 1156295..1157299 Ralstonia pickettii 12J 6285524 YP_001893329.1 CDS Rpic_4818 NC_010678.1 1157304 1157843 R PFAM: transcriptional regulator PadR family protein; KEGG: rso:RS05461 hypothetical protein; PadR family transcriptional regulator complement(1157304..1157843) Ralstonia pickettii 12J 6285532 YP_001893330.1 CDS Rpic_4819 NC_010678.1 1158267 1158689 R KEGG: azo:azo2559 conserved hypothetical secreted protein; hypothetical protein complement(1158267..1158689) Ralstonia pickettii 12J 6285538 YP_001893331.1 CDS Rpic_4820 NC_010678.1 1158888 1160150 R PFAM: beta-lactamase; KEGG: rme:Rmet_5786 beta-lactamase; beta-lactamase complement(1158888..1160150) Ralstonia pickettii 12J 6285548 YP_001893332.1 CDS Rpic_4821 NC_010678.1 1160489 1161406 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05463 probable transcription regulator protein; LysR family transcriptional regulator 1160489..1161406 Ralstonia pickettii 12J 6285242 YP_001893333.1 CDS Rpic_4822 NC_010678.1 1161640 1162710 R PFAM: dihydroorotate dehydrogenase; 2-nitropropane dioxygenase NPD; KEGG: rso:RS05464 probable oxidoreductase protein; 2-nitropropane dioxygenase complement(1161640..1162710) Ralstonia pickettii 12J 6285549 YP_001893334.1 CDS Rpic_4823 NC_010678.1 1162860 1163438 D PFAM: protein of unknown function DUF1470; KEGG: rso:RS05465 hypothetical protein; hypothetical protein 1162860..1163438 Ralstonia pickettii 12J 6285482 YP_001893335.1 CDS Rpic_4824 NC_010678.1 1163547 1164311 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RS05466 probable dehydrogenase oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1163547..1164311 Ralstonia pickettii 12J 6285555 YP_001893336.1 CDS Rpic_4825 NC_010678.1 1164536 1165795 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4072 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(1164536..1165795) Ralstonia pickettii 12J 6285562 YP_001893337.1 CDS Rpic_4826 NC_010678.1 1165885 1166847 D PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A4475 AraC family transcriptional regulator; AraC family transcriptional regulator 1165885..1166847 Ralstonia pickettii 12J 6285563 YP_001893338.1 CDS Rpic_4827 NC_010678.1 1166941 1167606 D PFAM: Glutathione S-transferase domain; KEGG: rso:RS04766 hypothetical protein; glutathione S-transferase 1166941..1167606 Ralstonia pickettii 12J 6285566 YP_001893339.1 CDS Rpic_4828 NC_010678.1 1167627 1168487 D TIGRFAM: methyltransferase; KEGG: bch:Bcen2424_4684 methyltransferase; methyltransferase 1167627..1168487 Ralstonia pickettii 12J 6285572 YP_001893340.1 CDS Rpic_4829 NC_010678.1 1168501 1168833 R KEGG: reu:Reut_A1768 hypothetical protein; hypothetical protein complement(1168501..1168833) Ralstonia pickettii 12J 6285580 YP_001893341.1 CDS Rpic_4830 NC_010678.1 1168989 1169378 R KEGG: rso:RS03755 probable transmembrane protein; hypothetical protein complement(1168989..1169378) Ralstonia pickettii 12J 6285581 YP_001893342.1 CDS Rpic_4831 NC_010678.1 1169468 1169833 R PFAM: response regulator receiver; KEGG: bxe:Bxe_B3007 response regulator receiver domain protein(CheY); response regulator receiver protein complement(1169468..1169833) Ralstonia pickettii 12J 6285179 YP_001893343.1 CDS Rpic_4832 NC_010678.1 1169854 1170387 R KEGG: bxe:Bxe_B3009 hypothetical protein; hypothetical protein complement(1169854..1170387) Ralstonia pickettii 12J 6285587 YP_001893344.1 CDS Rpic_4833 NC_010678.1 1170384 1171118 R PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_B3010 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1170384..1171118) Ralstonia pickettii 12J 6285593 YP_001893345.1 CDS Rpic_4834 NC_010678.1 1171118 1173502 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: PAC repeat-containing protein; KEGG: bxe:Bxe_B3011 CheA signal transduction histidine kinases (STHK); chemotaxis protein CheA complement(1171118..1173502) Ralstonia pickettii 12J 6285370 YP_001893346.1 CDS Rpic_4835 NC_010678.1 1173971 1174366 D PFAM: Domain of unknown function DUF1801; KEGG: rme:Rmet_1765 hypothetical protein; hypothetical protein 1173971..1174366 Ralstonia pickettii 12J 6285599 YP_001893347.1 CDS Rpic_4836 NC_010678.1 1174453 1174785 D KEGG: bte:BTH_II1151 hypothetical protein; hypothetical protein 1174453..1174785 Ralstonia pickettii 12J 6284907 YP_001893348.1 CDS Rpic_4837 NC_010678.1 1174831 1175379 R PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc3133 antibiotic resistance (acetyltransferase) protein; N-acetyltransferase GCN5 complement(1174831..1175379) Ralstonia pickettii 12J 6285608 YP_001893349.1 CDS Rpic_4838 NC_010678.1 1175565 1180481 D PFAM: NAD-glutamate dehydrogenase; KEGG: pol:Bpro_3020 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 1175565..1180481 Ralstonia pickettii 12J 6285615 YP_001893350.1 CDS Rpic_4839 NC_010678.1 1180557 1180808 R KEGG: reu:Reut_B5133 hypothetical protein; hypothetical protein complement(1180557..1180808) Ralstonia pickettii 12J 6285617 YP_001893351.1 CDS Rpic_4840 NC_010678.1 1181203 1182183 R KEGG: rso:RS03675 probable transmembrane protein; hypothetical protein complement(1181203..1182183) Ralstonia pickettii 12J 6285518 YP_001893352.1 CDS Rpic_4841 NC_010678.1 1182180 1183457 R predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase complement(1182180..1183457) Ralstonia pickettii 12J 6285620 YP_001893353.1 CDS Rpic_4842 NC_010678.1 1183459 1185597 R PFAM: polysaccharide deacetylase; KEGG: rso:RSp0287 hemin storage signal peptide protein; polysaccharide deacetylase complement(1183459..1185597) Ralstonia pickettii 12J 6285643 YP_001893354.1 CDS Rpic_4843 NC_010678.1 1185648 1188113 R KEGG: rso:RSp0286 hemin-binding outer membrane transmembrane protein; hemin-binding outer membrane transmembrane protein complement(1185648..1188113) Ralstonia pickettii 12J 6285029 YP_001893355.1 CDS Rpic_4844 NC_010678.1 1188189 1189100 R PFAM: regulatory protein LuxR; KEGG: rso:RS03679 probable transcription regulator protein; LuxR family two component transcriptional regulator complement(1188189..1189100) Ralstonia pickettii 12J 6285647 YP_001893356.1 CDS Rpic_4845 NC_010678.1 1189646 1189804 R KEGG: rso:RS03680 probable transmembrane protein; hypothetical protein complement(1189646..1189804) Ralstonia pickettii 12J 6284871 YP_001893357.1 CDS Rpic_4846 NC_010678.1 1190030 1191025 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pol:Bpro_4367 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(1190030..1191025) Ralstonia pickettii 12J 6285649 YP_001893358.1 CDS Rpic_4847 NC_010678.1 1191025 1192254 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(1191025..1192254) Ralstonia pickettii 12J 6285652 YP_001893359.1 CDS Rpic_4848 NC_010678.1 1192342 1192938 D PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_4806 XRE family transcriptional regulator; XRE family transcriptional regulator 1192342..1192938 Ralstonia pickettii 12J 6285659 YP_001893360.1 CDS Rpic_4849 NC_010678.1 1192944 1194296 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rso:RSp0283 probable DNA-damage-inducible F transmembrane protein; MATE efflux family protein complement(1192944..1194296) Ralstonia pickettii 12J 6285589 YP_001893361.1 CDS Rpic_4850 NC_010678.1 1194561 1196291 D PFAM: amino acid permease-associated region; KEGG: rso:RS03682 probable amino-acid permease transmembrane protein; amino acid permease 1194561..1196291 Ralstonia pickettii 12J 6285660 YP_001893362.1 CDS Rpic_4851 NC_010678.1 1196555 1197457 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6337 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1196555..1197457) Ralstonia pickettii 12J 6285662 YP_001893363.1 CDS Rpic_4852 NC_010678.1 1197560 1198444 D PFAM: aldo/keto reductase; KEGG: bvi:Bcep1808_6440 aldo/keto reductase; oxidoreductase 1197560..1198444 Ralstonia pickettii 12J 6285673 YP_001893364.1 CDS Rpic_4853 NC_010678.1 1198559 1198804 R KEGG: spe:Spro_1357 MerR family transcriptional regulator; MerR family transcriptional regulator complement(1198559..1198804) Ralstonia pickettii 12J 6285296 YP_001893365.1 CDS Rpic_4854 NC_010678.1 1199099 1200883 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: reh:H16_B1253 predicted signal transduction protein containingan EAL and a GGDEF domain; diguanylate cyclase/phosphodiesterase 1199099..1200883 Ralstonia pickettii 12J 6285682 YP_001893366.1 CDS Rpic_4855 NC_010678.1 1201424 1202842 D PFAM: coagulation factor 5/8 type domain protein; WD40 domain protein beta Propeller; KEGG: rso:RS03685 probable signal peptide protein; coagulation factor 5/8 type domain-containing protein 1201424..1202842 Ralstonia pickettii 12J 6285689 YP_001893367.1 CDS Rpic_4856 NC_010678.1 1203015 1204682 D KEGG: scl:sce1179 alkaline phosphatase; hypothetical protein 1203015..1204682 Ralstonia pickettii 12J 6285694 YP_001893368.1 CDS Rpic_4857 NC_010678.1 1204705 1205718 D catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 1204705..1205718 Ralstonia pickettii 12J 6285702 YP_001893369.1 CDS Rpic_4858 NC_010678.1 1205715 1206407 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: reh:H16_B1400 transcriptional regulator CRP family; Crp/Fnr family transcriptional regulator complement(1205715..1206407) Ralstonia pickettii 12J 6285069 YP_001893370.1 CDS Rpic_4859 NC_010678.1 1206572 1207084 R KEGG: rso:RS02107 hypothetical protein; hypothetical protein complement(1206572..1207084) Ralstonia pickettii 12J 6285703 YP_001893371.1 CDS Rpic_4860 NC_010678.1 1207113 1207712 D catalyzes the interconversion of chorismate to prephenate; chorismate mutase 1207113..1207712 Ralstonia pickettii 12J 6285656 YP_001893372.1 CDS Rpic_4861 NC_010678.1 1207797 1209275 R KEGG: rso:RS02108 probable protease signal peptide protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(1207797..1209275) Ralstonia pickettii 12J 6285705 YP_001893373.1 CDS Rpic_4862 NC_010678.1 1209422 1210738 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RS02109 probable transmembrane two-component sensor kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase complement(1209422..1210738) Ralstonia pickettii 12J 6285706 YP_001893374.1 CDS Rpic_4863 NC_010678.1 1210742 1211476 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS02110 probable two-component response regulator transcription regulator protein; winged helix family two component transcriptional regulator complement(1210742..1211476) Ralstonia pickettii 12J 6285607 YP_001893375.1 CDS Rpic_4864 NC_010678.1 1211599 1212441 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rso:RSp1556 transcription regulation repressor HexR transcription regulator protein; RpiR family transcriptional regulator 1211599..1212441 Ralstonia pickettii 12J 6285707 YP_001893376.1 CDS glk NC_010678.1 1212464 1213519 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(1212464..1213519) Ralstonia pickettii 12J 6285270 YP_001893377.1 CDS Rpic_4866 NC_010678.1 1213500 1214204 R TIGRFAM: 6-phosphogluconolactonase; KEGG: rso:RSp1558 probable 6-phosphogluconolactonase oxidoreductase protein; 6-phosphogluconolactonase complement(1213500..1214204) Ralstonia pickettii 12J 6285713 YP_001893378.1 CDS Rpic_4867 NC_010678.1 1214204 1215673 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(1214204..1215673) Ralstonia pickettii 12J 6285259 YP_001893379.1 CDS Rpic_4868 NC_010678.1 1215981 1217819 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 1215981..1217819 Ralstonia pickettii 12J 6285714 YP_001893380.1 CDS Rpic_4869 NC_010678.1 1217836 1218291 R PFAM: UspA domain protein; KEGG: rso:RS02117 hypothetical protein; UspA domain-containing protein complement(1217836..1218291) Ralstonia pickettii 12J 6285715 YP_001893381.1 CDS Rpic_4870 NC_010678.1 1218425 1218892 D KEGG: rso:RS02118 hypothetical protein; hypothetical protein 1218425..1218892 Ralstonia pickettii 12J 6285721 YP_001893382.1 CDS Rpic_4871 NC_010678.1 1218992 1219504 D KEGG: rso:RS02119 hypothetical protein; hypothetical protein 1218992..1219504 Ralstonia pickettii 12J 6285722 YP_001893383.1 CDS Rpic_4872 NC_010678.1 1219733 1220881 D PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: rso:RSp1564 probable cytochrome c oxidase polypeptide II (cytochrome BB3 subunit 2) transmembrane protein; cytochrome c oxidase subunit II 1219733..1220881 Ralstonia pickettii 12J 6285077 YP_001893384.1 CDS Rpic_4873 NC_010678.1 1220894 1222654 D KEGG: rso:RSp1565 probable cytochrome c oxidase polypeptide I (cytochrome BB3 subunit 1) oxidoreductase protein; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 1220894..1222654 Ralstonia pickettii 12J 6285723 YP_001893385.1 CDS Rpic_4874 NC_010678.1 1222651 1223259 D PFAM: cytochrome c oxidase subunit III; KEGG: rso:RSp1566 probable cytochrome-C oxidase oxidoreductase protein; cytochrome c oxidase subunit III 1222651..1223259 Ralstonia pickettii 12J 6285724 YP_001893386.1 CDS Rpic_4875 NC_010678.1 1223256 1223948 D PFAM: cytochrome c oxidase subunit III; KEGG: rso:RSp1567 probable cytochrome-C oxidase subunit III oxidoreductase protein; cytochrome c oxidase subunit III 1223256..1223948 Ralstonia pickettii 12J 6285542 YP_001893387.1 CDS Rpic_4876 NC_010678.1 1223956 1224303 D KEGG: rso:RS02124 hypothetical protein; hypothetical protein 1223956..1224303 Ralstonia pickettii 12J 6285725 YP_001893388.1 CDS Rpic_4877 NC_010678.1 1224325 1225560 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rso:RS02139 hypothetical protein; hypothetical protein complement(1224325..1225560) Ralstonia pickettii 12J 6285728 YP_001893389.1 CDS Rpic_4878 NC_010678.1 1225653 1228628 D PFAM: ABC transporter transmembrane region; response regulator receiver; ABC transporter; ATP-binding region ATPase domain protein; SMART: AAA ATPase; KEGG: bpt:Bpet2380 ABC transporter, ATP-binding protein; response regulator receiver protein 1225653..1228628 Ralstonia pickettii 12J 6285739 YP_001893390.1 CDS Rpic_4879 NC_010678.1 1228642 1229181 D KEGG: bpt:Bpet2378 hypothetical protein; hypothetical protein 1228642..1229181 Ralstonia pickettii 12J 6285740 YP_001893391.1 CDS Rpic_4880 NC_010678.1 1229531 1230844 D PFAM: glycosyl transferase group 1; KEGG: reu:Reut_B4390 glycosyl transferase, group 1; group 1 glycosyl transferase 1229531..1230844 Ralstonia pickettii 12J 6285080 YP_001893392.1 CDS Rpic_4881 NC_010678.1 1230841 1231656 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: tbd:Tbd_0734 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1230841..1231656 Ralstonia pickettii 12J 6285743 YP_001893393.1 CDS Rpic_4882 NC_010678.1 1231647 1232261 D TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: reu:Reut_B4387 histidinol-phosphate phosphatase:HAD-superfamily hydrolase subfamily IIIA; histidinol-phosphate phosphatase family protein 1231647..1232261 Ralstonia pickettii 12J 6285758 YP_001893394.1 CDS Rpic_4883 NC_010678.1 1232258 1233469 D PFAM: glycosyl transferase family 9; KEGG: reu:Reut_B4386 lipopolysaccharide heptosyltransferase II; glycosyl transferase family protein 1232258..1233469 Ralstonia pickettii 12J 6285414 YP_001893395.1 CDS Rpic_4884 NC_010678.1 1233509 1235338 D PFAM: Carbamoyltransferase; KEGG: reu:Reut_B4385 carbamoyltransferase; Carbamoyltransferase 1233509..1235338 Ralstonia pickettii 12J 6285759 YP_001893396.1 CDS Rpic_4885 NC_010678.1 1235335 1236369 D PFAM: glycosyl transferase family 2; KEGG: bmu:Bmul_5443 glycosyl transferase family 2; family 2 glycosyl transferase 1235335..1236369 Ralstonia pickettii 12J 6285747 YP_001893397.1 CDS Rpic_4886 NC_010678.1 1236366 1237511 D PFAM: glycosyl transferase family 9; KEGG: bmu:Bmul_5444 glycosyl transferase family 9; glycosyl transferase family protein 1236366..1237511 Ralstonia pickettii 12J 6285762 YP_001893398.1 CDS Rpic_4887 NC_010678.1 1237508 1238500 D KEGG: reu:Reut_B4382 glycosyl transferase, group 1; group 1 glycosyl transferase 1237508..1238500 Ralstonia pickettii 12J 6285084 YP_001893399.1 CDS Rpic_4888 NC_010678.1 1238497 1239519 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: xft:PD1543 dTDP-glucose 4-6-dehydratase; NAD-dependent epimerase/dehydratase 1238497..1239519 Ralstonia pickettii 12J 6285769 YP_001893400.1 CDS Rpic_4889 NC_010678.1 1239541 1240464 R PFAM: glycosyl transferase family 2; KEGG: bmn:BMA10247_A2267 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase complement(1239541..1240464) Ralstonia pickettii 12J 6285770 YP_001893401.1 CDS Rpic_4890 NC_010678.1 1240448 1241170 R PFAM: LmbE family protein; KEGG: bxe:Bxe_B2231 hypothetical protein; LmbE family protein complement(1240448..1241170) Ralstonia pickettii 12J 6285776 YP_001893402.1 CDS Rpic_4891 NC_010678.1 1241167 1241322 R hypothetical protein complement(1241167..1241322) Ralstonia pickettii 12J 6285782 YP_001893403.1 CDS Rpic_4892 NC_010678.1 1241408 1242679 R KEGG: reu:Reut_A1581 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein complement(1241408..1242679) Ralstonia pickettii 12J 6285785 YP_001893404.1 CDS Rpic_4893 NC_010678.1 1242693 1242959 R KEGG: reu:Reut_B4638 hypothetical protein; hypothetical protein complement(1242693..1242959) Ralstonia pickettii 12J 6285788 YP_001893405.1 CDS Rpic_4894 NC_010678.1 1242995 1243486 R KEGG: bxe:Bxe_A2030 hypothetical protein; hypothetical protein complement(1242995..1243486) Ralstonia pickettii 12J 6285789 YP_001893406.1 CDS Rpic_4895 NC_010678.1 1243641 1244501 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azo:azo1732 short-chain dehydrogenase family protein; short-chain dehydrogenase/reductase SDR 1243641..1244501 Ralstonia pickettii 12J 6285791 YP_001893407.1 CDS Rpic_4896 NC_010678.1 1244823 1248029 D PFAM: acriflavin resistance protein; KEGG: rso:RS02154 probable transport transmembrane protein; acriflavin resistance protein 1244823..1248029 Ralstonia pickettii 12J 6285302 YP_001893408.1 CDS Rpic_4897 NC_010678.1 1248022 1249335 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS02155 transport transmembrane protein; RND family efflux transporter MFP subunit 1248022..1249335 Ralstonia pickettii 12J 6285792 YP_001893409.1 CDS Rpic_4898 NC_010678.1 1249332 1250786 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS02156 outer membrane drug efflux lipoprotein; NodT family RND efflux system outer membrane lipoprotein 1249332..1250786 Ralstonia pickettii 12J 6285795 YP_001893410.1 CDS Rpic_4899 NC_010678.1 1250790 1251719 R KEGG: rso:RS02157 hypothetical protein; hypothetical protein complement(1250790..1251719) Ralstonia pickettii 12J 6285796 YP_001893411.1 CDS Rpic_4900 NC_010678.1 1252171 1252527 D PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B0063 endoribonuclease L-PSP; endoribonuclease L-PSP 1252171..1252527 Ralstonia pickettii 12J 6285131 YP_001893412.1 CDS Rpic_4901 NC_010678.1 1252541 1253791 D PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0799 D-amino-acid dehydrogenase; FAD dependent oxidoreductase 1252541..1253791 Ralstonia pickettii 12J 6285797 YP_001893413.1 CDS Rpic_4902 NC_010678.1 1253793 1255271 R PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: rme:Rmet_4481 MlrC-like protein; MlrC domain-containing protein complement(1253793..1255271) Ralstonia pickettii 12J 6285800 YP_001893414.1 CDS Rpic_4903 NC_010678.1 1255292 1256554 R KEGG: rme:Rmet_4480 amidase, hydantoinase/carbamoylase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; amidase complement(1255292..1256554) Ralstonia pickettii 12J 6285803 YP_001893415.1 CDS Rpic_4904 NC_010678.1 1256551 1257264 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rme:Rmet_4479 ABC transporter; ABC transporter complement(1256551..1257264) Ralstonia pickettii 12J 6285805 YP_001893416.1 CDS Rpic_4905 NC_010678.1 1257261 1258031 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rme:Rmet_4478 ABC transporter; ABC transporter complement(1257261..1258031) Ralstonia pickettii 12J 6285806 YP_001893417.1 CDS Rpic_4906 NC_010678.1 1258028 1258996 R PFAM: inner-membrane translocator; KEGG: rme:Rmet_4477 inner-membrane translocator; inner-membrane translocator complement(1258028..1258996) Ralstonia pickettii 12J 6285147 YP_001893418.1 CDS Rpic_4907 NC_010678.1 1258996 1259853 R PFAM: inner-membrane translocator; KEGG: rme:Rmet_4476 inner-membrane translocator; inner-membrane translocator complement(1258996..1259853) Ralstonia pickettii 12J 6285808 YP_001893419.1 CDS Rpic_4908 NC_010678.1 1259915 1261114 R KEGG: rme:Rmet_4475 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein; branched-chain amino acid ABC transporter substrate-binding protein complement(1259915..1261114) Ralstonia pickettii 12J 6285812 YP_001893420.1 CDS Rpic_4909 NC_010678.1 1261183 1261278 R hypothetical protein complement(1261183..1261278) Ralstonia pickettii 12J 6285816 YP_001893421.1 CDS Rpic_4910 NC_010678.1 1261470 1262309 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rme:Rmet_4603 GntR-like protein; GntR family transcriptional regulator 1261470..1262309 Ralstonia pickettii 12J 6285817 YP_001893422.1 CDS Rpic_4911 NC_010678.1 1262314 1262757 R catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase complement(1262314..1262757) Ralstonia pickettii 12J 6285822 YP_001893423.1 CDS Rpic_4912 NC_010678.1 1263058 1264428 D PFAM: Carbohydrate-selective porin OprB; KEGG: rso:RSp1632 porin B precursor outer (glucose porin) transmembrane protein; carbohydrate-selective porin OprB 1263058..1264428 Ralstonia pickettii 12J 6285583 YP_001893424.1 CDS Rpic_4913 NC_010678.1 1264460 1265467 D KEGG: rso:RSp1633 probable D-xylose-binding periplasmic ABC transporter protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; D-xylose ABC transporter periplasmic substrate-binding protein 1264460..1265467 Ralstonia pickettii 12J 6285823 YP_001893425.1 CDS Rpic_4914 NC_010678.1 1265498 1267045 D with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 1265498..1267045 Ralstonia pickettii 12J 6285824 YP_001893426.1 CDS Rpic_4915 NC_010678.1 1267052 1268260 D PFAM: inner-membrane translocator; KEGG: rso:RSp1635 probable xylose transmembrane ABC transporter protein; monosaccharide-transporting ATPase 1267052..1268260 Ralstonia pickettii 12J 6285422 YP_001893427.1 CDS Rpic_4916 NC_010678.1 1268396 1269313 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: rso:RS02194 oxidoreductase protein; NAD-dependent epimerase/dehydratase 1268396..1269313 Ralstonia pickettii 12J 6285825 YP_001893428.1 CDS Rpic_4917 NC_010678.1 1269371 1270588 R KEGG: rme:Rmet_2737 hypothetical protein; hypothetical protein complement(1269371..1270588) Ralstonia pickettii 12J 6285272 YP_001893429.1 CDS Rpic_4918 NC_010678.1 1271045 1272085 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RS02195 probable transcription regulator transcription regulator protein; LacI family transcriptional regulator complement(1271045..1272085) Ralstonia pickettii 12J 6285826 YP_001893430.1 CDS Rpic_4919 NC_010678.1 1272188 1273081 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RS02196 hypothetical protein; hypothetical protein complement(1272188..1273081) Ralstonia pickettii 12J 6285827 YP_001893431.1 CDS Rpic_4920 NC_010678.1 1273189 1273986 D PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; KEGG: rso:RS02197 probable transcriptional regulator transcription regulator protein; AraC family transcriptional regulator 1273189..1273986 Ralstonia pickettii 12J 6285828 YP_001893432.1 CDS Rpic_4921 NC_010678.1 1274329 1274823 D KEGG: rme:Rmet_5762 hypothetical protein; hypothetical protein 1274329..1274823 Ralstonia pickettii 12J 6285829 YP_001893433.1 CDS Rpic_4922 NC_010678.1 1274820 1275308 D KEGG: rme:Rmet_5763 hypothetical protein; hypothetical protein 1274820..1275308 Ralstonia pickettii 12J 6285830 YP_001893434.1 CDS Rpic_4923 NC_010678.1 1275421 1275837 D PFAM: regulatory protein MarR; KEGG: rso:RS02203 probable transcription regulator transcription regulator protein; MarR family transcriptional regulator 1275421..1275837 Ralstonia pickettii 12J 6285834 YP_001893435.1 CDS Rpic_4924 NC_010678.1 1275888 1276280 D PFAM: 4-oxalocrotonate tautomerase; KEGG: rso:RS02204 hypothetical protein; 4-oxalocrotonate tautomerase 1275888..1276280 Ralstonia pickettii 12J 6285836 YP_001893436.1 CDS Rpic_4925 NC_010678.1 1276280 1276459 D KEGG: rso:RS02205 transmembrane protein; hypothetical protein 1276280..1276459 Ralstonia pickettii 12J 6285655 YP_001893437.1 CDS Rpic_4926 NC_010678.1 1276476 1277495 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bte:BTH_I0059 AraC family transcriptional regulator; AraC family transcriptional regulator complement(1276476..1277495) Ralstonia pickettii 12J 6285838 YP_001893438.1 CDS Rpic_4927 NC_010678.1 1277581 1278723 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bpl:BURPS1106A_0069 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 1277581..1278723 Ralstonia pickettii 12J 6285334 YP_001893439.1 CDS Rpic_4928 NC_010678.1 1278751 1279956 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1278751..1279956 Ralstonia pickettii 12J 6285843 YP_001893440.1 CDS Rpic_4929 NC_010678.1 1279970 1282096 D PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bte:BTH_I0062 fatty oxidation complex, alpha subunit; 3-hydroxyacyl-CoA dehydrogenase 1279970..1282096 Ralstonia pickettii 12J 6285844 YP_001893441.1 CDS Rpic_4930 NC_010678.1 1282421 1285084 D KEGG: reh:H16_A0025 predicted signal transduction protein containing PAS, GGDEF and EAL domains; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1282421..1285084 Ralstonia pickettii 12J 6285262 YP_001893442.1 CDS Rpic_4933 NC_010678.1 1285820 1286296 D PFAM: protein of unknown function DUF305; KEGG: rme:Rmet_5398 protein of unknown function DUF305; hypothetical protein 1285820..1286296 Ralstonia pickettii 12J 6285941 YP_001893443.1 CDS Rpic_4934 NC_010678.1 1286296 1287771 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: rle:RL1137 hypothetical protein; hypothetical protein 1286296..1287771 Ralstonia pickettii 12J 6285849 YP_001893444.1 CDS Rpic_4935 NC_010678.1 1287897 1288493 D PFAM: heat shock protein DnaJ domain protein; KEGG: reh:H16_A1620 DnaJ-class molecular chaperone; heat shock protein DnaJ domain-containing protein 1287897..1288493 Ralstonia pickettii 12J 6285850 YP_001893445.1 CDS Rpic_4936 NC_010678.1 1288862 1290253 D PFAM: extracellular solute-binding protein family 1; KEGG: art:Arth_3041 extracellular solute-binding protein; extracellular solute-binding protein 1288862..1290253 Ralstonia pickettii 12J 6285072 YP_001893446.1 CDS Rpic_4937 NC_010678.1 1290250 1293192 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: saz:Sama_2448 sensory box protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1290250..1293192 Ralstonia pickettii 12J 6285852 YP_001893447.1 CDS Rpic_4938 NC_010678.1 1293429 1294334 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_0301 MdcR; LysR family transcriptional regulator complement(1293429..1294334) Ralstonia pickettii 12J 6285854 YP_001893448.1 CDS Rpic_4939 NC_010678.1 1294500 1296188 D TIGRFAM: malonate decarboxylase alpha subunit; KEGG: pap:PSPA7_0292 malonate decarboxylase alpha subunit; malonate decarboxylase subunit alpha 1294500..1296188 Ralstonia pickettii 12J 6285855 YP_001893449.1 CDS Rpic_4940 NC_010678.1 1296188 1297117 D catalyzes the reversible formation of 2'-(5''-triphosphoribosyl)-3'dephospho-CoA from 3-dephospho-CoA; triphosphoribosyl-dephospho-CoA synthase 1296188..1297117 Ralstonia pickettii 12J 6285856 YP_001893450.1 CDS Rpic_4941 NC_010678.1 1297104 1297409 D TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: pna:Pnap_0948 malonate decarboxylase delta subunit; malonate decarboxylase acyl carrier protein 1297104..1297409 Ralstonia pickettii 12J 6285506 YP_001893451.1 CDS Rpic_4942 NC_010678.1 1297419 1298264 D The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 1297419..1298264 Ralstonia pickettii 12J 6285860 YP_001893452.1 CDS Rpic_4943 NC_010678.1 1298261 1299091 D TIGRFAM: malonate decarboxylase gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: pna:Pnap_0950 malonate decarboxylase gamma subunit; malonate decarboxylase subunit gamma 1298261..1299091 Ralstonia pickettii 12J 6285861 YP_001893453.1 CDS Rpic_4944 NC_010678.1 1299462 1299869 D TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: reu:Reut_A1611 malonate transporter MadL subunit; malonate transporter subunit MadL 1299462..1299869 Ralstonia pickettii 12J 6285865 YP_001893454.1 CDS Rpic_4945 NC_010678.1 1299881 1300645 D TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: bch:Bcen2424_1268 malonate transporter, MadM subunit; malonate transporter subunit MadM 1299881..1300645 Ralstonia pickettii 12J 6285260 YP_001893455.1 CDS Rpic_4946 NC_010678.1 1300642 1301277 D Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 1300642..1301277 Ralstonia pickettii 12J 6285866 YP_001893456.1 CDS Rpic_4947 NC_010678.1 1301274 1302209 D TIGRFAM: malonate decarboxylase epsilon subunit; PFAM: Acyl transferase; KEGG: pae:PA0214 probable acyl transferase; malonate decarboxylase subunit epsilon 1301274..1302209 Ralstonia pickettii 12J 6285078 YP_001897600.1 CDS dnaA NC_010682.1 328 1917 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 328..1917 Ralstonia pickettii 12J 6289854 YP_001897601.1 CDS Rpic_0002 NC_010682.1 2194 3309 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2194..3309 Ralstonia pickettii 12J 6286480 YP_001897602.1 CDS gyrB NC_010682.1 3438 5966 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 3438..5966 Ralstonia pickettii 12J 6286481 YP_001897603.1 CDS Rpic_0004 NC_010682.1 6281 8413 D PFAM: N-6 DNA methylase; KEGG: eca:ECA0584 restriction enzyme alpha subunit; N-6 DNA methylase 6281..8413 Ralstonia pickettii 12J 6288115 YP_001897604.1 CDS Rpic_0005 NC_010682.1 8418 8852 D hypothetical protein 8418..8852 Ralstonia pickettii 12J 6288116 YP_001897605.1 CDS Rpic_0006 NC_010682.1 9044 9454 R KEGG: ava:Ava_4685 hypothetical protein; hypothetical protein complement(9044..9454) Ralstonia pickettii 12J 6288117 YP_001897606.1 CDS Rpic_0007 NC_010682.1 10376 10744 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 10376..10744 Ralstonia pickettii 12J 6288118 YP_001897607.1 CDS Rpic_0008 NC_010682.1 10906 11763 R PFAM: Integrase catalytic region; KEGG: rme:Rmet_6067 integrase, catalytic region; Integrase catalytic subunit complement(10906..11763) Ralstonia pickettii 12J 6288119 YP_001897608.1 CDS Rpic_0009 NC_010682.1 11817 12146 R PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_6068 transposase IS3/IS911; transposase IS3/IS911 family protein complement(11817..12146) Ralstonia pickettii 12J 6289277 YP_001897609.1 CDS Rpic_0010 NC_010682.1 12674 13633 D PFAM: Fimbrial protein; KEGG: pae:PA5284 hypothetical protein; Fimbrial protein 12674..13633 Ralstonia pickettii 12J 6289278 YP_001897610.1 CDS Rpic_0011 NC_010682.1 13662 14021 R KEGG: bch:Bcen2424_2530 hypothetical protein; hypothetical protein complement(13662..14021) Ralstonia pickettii 12J 6289279 YP_001897611.1 CDS Rpic_0014 NC_010682.1 25869 27560 D PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: rso:RSc1779 probable activation/secretion signal peptide protein; Polypeptide-transport-associated domain-containing protein ShlB-type 25869..27560 Ralstonia pickettii 12J 6289281 YP_001897612.1 CDS Rpic_0015 NC_010682.1 27822 28013 R hypothetical protein complement(27822..28013) Ralstonia pickettii 12J 6287736 YP_001897613.1 CDS Rpic_0016 NC_010682.1 28338 29102 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rso:RSc2102 probable transcription regulator protein; GntR family transcriptional regulator 28338..29102 Ralstonia pickettii 12J 6287737 YP_001897614.1 CDS Rpic_0017 NC_010682.1 29130 29957 D PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: rso:RSc2103 probable amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein 29130..29957 Ralstonia pickettii 12J 6287738 YP_001897615.1 CDS Rpic_0018 NC_010682.1 30115 30849 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2104 probable amino-acid transmembrane ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 30115..30849 Ralstonia pickettii 12J 6287739 YP_001897616.1 CDS Rpic_0019 NC_010682.1 30846 31499 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2105 probable amino-acid transmembrane ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 30846..31499 Ralstonia pickettii 12J 6287367 YP_001897617.1 CDS Rpic_0020 NC_010682.1 31486 32223 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2106 probable amino-acid ATP-binding ABC transporter protein; ABC transporter-like protein 31486..32223 Ralstonia pickettii 12J 6287368 YP_001897618.1 CDS Rpic_0021 NC_010682.1 32307 33263 D PFAM: protein of unknown function UPF0187; KEGG: rso:RSc3414 probable transmembrane protein; hypothetical protein 32307..33263 Ralstonia pickettii 12J 6287369 YP_001897619.1 CDS Rpic_0022 NC_010682.1 33286 33957 R KEGG: reu:Reut_B4310 hypothetical protein; hypothetical protein complement(33286..33957) Ralstonia pickettii 12J 6287370 YP_001897620.1 CDS Rpic_0023 NC_010682.1 34060 34758 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: reh:H16_B1147 cNMP regulatory protein; Crp/Fnr family transcriptional regulator complement(34060..34758) Ralstonia pickettii 12J 6287371 YP_001897621.1 CDS Rpic_0024 NC_010682.1 34952 36586 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 34952..36586 Ralstonia pickettii 12J 6288262 YP_001897622.1 CDS Rpic_0025 NC_010682.1 36686 38254 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: rso:RSc0127 putative hemagglutinin-related protein; 40-residue YVTN family beta-propeller repeat-containing protein complement(36686..38254) Ralstonia pickettii 12J 6288263 YP_001897623.1 CDS Rpic_0026 NC_010682.1 38470 39015 D PFAM: GCN5-related N-acetyltransferase; KEGG: bte:BTH_II0494 acetyltransferase, GNAT family; N-acetyltransferase GCN5 38470..39015 Ralstonia pickettii 12J 6288264 YP_001897624.1 CDS Rpic_0027 NC_010682.1 39109 39582 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bte:BTH_I0996 carboxymuconolactone decarboxylase family protein; alkylhydroperoxidase complement(39109..39582) Ralstonia pickettii 12J 6288265 YP_001897625.1 CDS Rpic_0028 NC_010682.1 39715 40623 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bte:BTH_I0997 RNA polymerase sigma-70 factor, ECF family; ECF subfamily RNA polymerase sigma-24 subunit complement(39715..40623) Ralstonia pickettii 12J 6288266 YP_001897626.1 CDS Rpic_0029 NC_010682.1 40695 42893 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_3441 PAS/PAC sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase complement(40695..42893) Ralstonia pickettii 12J 6289740 YP_001897627.1 CDS Rpic_0030 NC_010682.1 43133 43747 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0129 hypothetical protein; glutathione S-transferase domain-containing protein 43133..43747 Ralstonia pickettii 12J 6289741 YP_001897628.1 CDS Rpic_0031 NC_010682.1 43755 44903 R PFAM: CBS domain containing protein; HPP family protein?; KEGG: rso:RSc0130 probable transmembrane protein; hypothetical protein complement(43755..44903) Ralstonia pickettii 12J 6289742 YP_001897629.1 CDS Rpic_0032 NC_010682.1 45136 45333 D KEGG: rso:RSc0131 probable lipoprotein; hypothetical protein 45136..45333 Ralstonia pickettii 12J 6289743 YP_001897630.1 CDS Rpic_0033 NC_010682.1 45347 46393 D TIGRFAM: autotransporter-associated beta strand repeat protein; KEGG: rso:RSc0131 probable lipoprotein; autotransporter-associated beta strand repeat-containing protein 45347..46393 Ralstonia pickettii 12J 6289744 YP_001897631.1 CDS Rpic_0034 NC_010682.1 46398 47237 R PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: rso:RSc0132 probable transcription regulator protein; AraC family transcriptional regulator complement(46398..47237) Ralstonia pickettii 12J 6287392 YP_001897632.1 CDS Rpic_0035 NC_010682.1 47549 47842 D PFAM: GYD family protein; KEGG: rso:RSc0133 hypothetical protein; GYD family protein 47549..47842 Ralstonia pickettii 12J 6287393 YP_001897633.1 CDS Rpic_0036 NC_010682.1 47913 49103 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(47913..49103) Ralstonia pickettii 12J 6287394 YP_001897634.1 CDS Rpic_0037 NC_010682.1 49343 50191 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 49343..50191 Ralstonia pickettii 12J 6287395 YP_001897635.1 CDS Rpic_0038 NC_010682.1 50205 51098 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 50205..51098 Ralstonia pickettii 12J 6287396 YP_001897636.1 CDS dapF NC_010682.1 51188 52066 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 51188..52066 Ralstonia pickettii 12J 6289735 YP_001897637.1 CDS Rpic_0040 NC_010682.1 52114 52941 D PFAM: protein of unknown function DUF344; KEGG: rso:RSc0138 hypothetical protein; hypothetical protein 52114..52941 Ralstonia pickettii 12J 6289736 YP_001897638.1 CDS pyrE NC_010682.1 53067 53744 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(53067..53744) Ralstonia pickettii 12J 6289737 YP_001897639.1 CDS Rpic_0042 NC_010682.1 53778 54563 D KEGG: rso:RSc0140 putative exodeoxyribonuclease III protein; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 53778..54563 Ralstonia pickettii 12J 6289738 YP_001897640.1 CDS Rpic_0043 NC_010682.1 54691 55704 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 54691..55704 Ralstonia pickettii 12J 6289739 YP_001897641.1 CDS Rpic_0044 NC_010682.1 55777 56685 R PFAM: band 7 protein; KEGG: rso:RSc0145 putative transmembrane protein; hypothetical protein complement(55777..56685) Ralstonia pickettii 12J 6287296 YP_001897642.1 CDS Rpic_0045 NC_010682.1 56994 57794 R PFAM: protein of unknown function DUF218; KEGG: rso:RSc0146 probable lipoprotein transmembrane; hypothetical protein complement(56994..57794) Ralstonia pickettii 12J 6287297 YP_001897643.1 CDS Rpic_0046 NC_010682.1 58107 59051 R PFAM: peptidase M48 Ste24p; KEGG: rso:RSc0153 hypothetical signal peptide protein; peptidase M48 Ste24p complement(58107..59051) Ralstonia pickettii 12J 6287298 YP_001897644.1 CDS ampG NC_010682.1 59149 60438 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc0154 muropeptide transporter; muropeptide transporter 59149..60438 Ralstonia pickettii 12J 6287299 YP_001897645.1 CDS Rpic_0048 NC_010682.1 60443 61636 R PFAM: protein of unknown function DUF185; KEGG: rso:RSc0155 hypothetical protein; hypothetical protein complement(60443..61636) Ralstonia pickettii 12J 6287300 YP_001897646.1 CDS Rpic_0049 NC_010682.1 61653 62471 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc0156 short chain dehydrogenase; short chain dehydrogenase 61653..62471 Ralstonia pickettii 12J 6289749 YP_001897647.1 CDS Rpic_0050 NC_010682.1 62496 62894 D KEGG: rso:RSc0157 hypothetical protein; hypothetical protein 62496..62894 Ralstonia pickettii 12J 6289750 YP_001897648.1 CDS Rpic_0051 NC_010682.1 63193 64122 R PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rso:RSc0158 probable arginase protein; Arginase/agmatinase/formiminoglutamase complement(63193..64122) Ralstonia pickettii 12J 6289751 YP_001897649.1 CDS Rpic_0052 NC_010682.1 64147 65373 R TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: rso:RSc0159 probable acetylornithine aminotransferase protein; ornithine aminotransferase complement(64147..65373) Ralstonia pickettii 12J 6289752 YP_001897650.1 CDS Rpic_0053 NC_010682.1 65492 66415 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0160 probable transcription regulator protein; LysR family transcriptional regulator 65492..66415 Ralstonia pickettii 12J 6289753 YP_001897651.1 CDS Rpic_0054 NC_010682.1 66502 67254 D PFAM: regulatory protein TetR; KEGG: rso:RSc0162 probable transcription regulator protein; TetR family transcriptional regulator 66502..67254 Ralstonia pickettii 12J 6289191 YP_001897652.1 CDS Rpic_0055 NC_010682.1 67303 68277 D PFAM: secretion protein HlyD family protein; KEGG: rso:RSc0163 probable lipoprotein; secretion protein HlyD family protein 67303..68277 Ralstonia pickettii 12J 6289192 YP_001897653.1 CDS Rpic_0056 NC_010682.1 68274 69254 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0164 probable ATP-binding ABC transporter protein; ABC transporter-like protein 68274..69254 Ralstonia pickettii 12J 6289193 YP_001897654.1 CDS Rpic_0057 NC_010682.1 69251 70414 D PFAM: ABC-2 type transporter; KEGG: rso:RSc0165 probable transmembrane protein; ABC-2 type transporter 69251..70414 Ralstonia pickettii 12J 6289194 YP_001897655.1 CDS Rpic_0058 NC_010682.1 70422 72161 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RSc0166 probable outer membrane channel lipoprotein; NodT family RND efflux system outer membrane lipoprotein 70422..72161 Ralstonia pickettii 12J 6289195 YP_001897656.1 CDS Rpic_0059 NC_010682.1 72444 73409 R KEGG: rso:RSc0174 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(72444..73409) Ralstonia pickettii 12J 6288986 YP_001897657.1 CDS Rpic_0060 NC_010682.1 73564 74511 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 73564..74511 Ralstonia pickettii 12J 6288987 YP_001897658.1 CDS Rpic_0061 NC_010682.1 74849 76216 D TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rso:RSc0177 probable UDP-N-acetylglucosamine pyrophosphorylase protein; UDP-N-acetylglucosamine pyrophosphorylase 74849..76216 Ralstonia pickettii 12J 6288988 YP_001897659.1 CDS Rpic_0062 NC_010682.1 76334 78172 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 76334..78172 Ralstonia pickettii 12J 6288989 YP_001897660.1 CDS Rpic_0063 NC_010682.1 78297 78602 D KEGG: scl:sce2246 putative monooxygenase; hypothetical protein 78297..78602 Ralstonia pickettii 12J 6289231 YP_001897661.1 CDS Rpic_0064 NC_010682.1 78730 79002 D hypothetical protein 78730..79002 Ralstonia pickettii 12J 6289232 YP_001897662.1 CDS Rpic_0065 NC_010682.1 79111 80031 D PFAM: Patatin; KEGG: rso:RSc0221 hypothetical protein; patatin 79111..80031 Ralstonia pickettii 12J 6289233 YP_001897663.1 CDS Rpic_0066 NC_010682.1 80154 81167 D TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bte:BTH_II1160 alcohol dehydrogenase, zinc-containing; zinc-binding alcohol dehydrogenase family protein 80154..81167 Ralstonia pickettii 12J 6289234 YP_001897664.1 CDS Rpic_0067 NC_010682.1 81169 82083 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II1158 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(81169..82083) Ralstonia pickettii 12J 6289235 YP_001897665.1 CDS Rpic_0068 NC_010682.1 82250 84040 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bch:Bcen2424_6540 pyruvate decarboxylase; thiamine pyrophosphate protein TPP binding domain-containing protein complement(82250..84040) Ralstonia pickettii 12J 6289591 YP_001897666.1 CDS Rpic_0069 NC_010682.1 84093 84569 R PFAM: Hemerythrin HHE cation binding domain protein; KEGG: azo:azo0331 hypothetical protein; hemerythrin HHE cation binding domain-containing protein complement(84093..84569) Ralstonia pickettii 12J 6289592 YP_001897667.1 CDS Rpic_0070 NC_010682.1 84766 85236 D PFAM: PRC-barrel domain protein; KEGG: bvi:Bcep1808_5723 PRC-barrel domain protein; PRC-barrel domain-containing protein 84766..85236 Ralstonia pickettii 12J 6289593 YP_001897668.1 CDS Rpic_0071 NC_010682.1 85298 85486 D KEGG: bxe:Bxe_B1328 hypothetical protein; hypothetical protein 85298..85486 Ralstonia pickettii 12J 6289594 YP_001897669.1 CDS Rpic_0072 NC_010682.1 85554 85907 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01667 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase complement(85554..85907) Ralstonia pickettii 12J 6289595 YP_001897670.1 CDS Rpic_0073 NC_010682.1 86034 87242 D PFAM: aminotransferase class I and II; KEGG: rso:RSc0229 putative amino transferase protein; GntR family transcriptional regulator 86034..87242 Ralstonia pickettii 12J 6288836 YP_001897671.1 CDS Rpic_0074 NC_010682.1 87263 87769 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A1506 hypothetical protein; AraC family transcriptional regulator 87263..87769 Ralstonia pickettii 12J 6288837 YP_001897672.1 CDS Rpic_0075 NC_010682.1 87769 88185 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A1507 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 87769..88185 Ralstonia pickettii 12J 6288838 YP_001897673.1 CDS Rpic_0076 NC_010682.1 88182 88436 D KEGG: mes:Meso_0629 hypothetical protein; hypothetical protein 88182..88436 Ralstonia pickettii 12J 6288839 YP_001897674.1 CDS Rpic_0077 NC_010682.1 88744 89940 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr7376 putative integral membrane transporter protein; major facilitator superfamily protein complement(88744..89940) Ralstonia pickettii 12J 6288840 YP_001897675.1 CDS Rpic_0078 NC_010682.1 90003 90710 R PFAM: Glutathione S-transferase domain; KEGG: bpe:BP1300 putative glutathione transferase; glutathione S-transferase domain-containing protein complement(90003..90710) Ralstonia pickettii 12J 6288884 YP_001897676.1 CDS Rpic_0079 NC_010682.1 90805 91998 R PFAM: low temperature requirement A; KEGG: rso:RSc0230 probable transmembrane protein; low temperature requirement A complement(90805..91998) Ralstonia pickettii 12J 6288885 YP_001897677.1 CDS Rpic_0080 NC_010682.1 92033 92680 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc0231 putative (homoserine/homoserine lactone) efflux transmembrane protein; Lysine exporter protein LysE/YggA complement(92033..92680) Ralstonia pickettii 12J 6288886 YP_001897678.1 CDS Rpic_0081 NC_010682.1 93079 93321 R hypothetical protein complement(93079..93321) Ralstonia pickettii 12J 6288887 YP_001897679.1 CDS Rpic_0082 NC_010682.1 93314 94294 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0233 putative integral membrane transmembrane protein; hypothetical protein complement(93314..94294) Ralstonia pickettii 12J 6288631 YP_001897680.1 CDS Rpic_0083 NC_010682.1 94401 95123 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RSc0234 probable transcription regulator protein; AraC family transcriptional regulator complement(94401..95123) Ralstonia pickettii 12J 6288632 YP_001897681.1 CDS Rpic_0084 NC_010682.1 95357 98572 R PFAM: transcriptional activator domain; KEGG: gur:Gura_0766 tetratricopeptide TPR_4; transcriptional activator domain complement(95357..98572) Ralstonia pickettii 12J 6288633 YP_001897682.1 CDS Rpic_0085 NC_010682.1 98936 100576 D KEGG: reu:Reut_A0370 hypothetical protein; hypothetical protein 98936..100576 Ralstonia pickettii 12J 6288634 YP_001897683.1 CDS Rpic_0086 NC_010682.1 100821 101177 R PFAM: protein of unknown function DUF427; KEGG: rso:RSc0235 hypothetical protein; hypothetical protein complement(100821..101177) Ralstonia pickettii 12J 6287808 YP_001897684.1 CDS Rpic_0087 NC_010682.1 101262 102464 R PFAM: Rh family protein/ammonium transporter; KEGG: rme:Rmet_4750 Rh-like protein/ammonium transporter; Rh family protein/ammonium transporter complement(101262..102464) Ralstonia pickettii 12J 6287809 YP_001897685.1 CDS Rpic_0088 NC_010682.1 102724 103749 R KEGG: rso:RSc0236 hypothetical/unknown signal peptide protein; hypothetical protein complement(102724..103749) Ralstonia pickettii 12J 6287810 YP_001897686.1 CDS Rpic_0089 NC_010682.1 104095 107382 D KEGG: rso:RSc0237 putative methylmalonyl-CoA mutase protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: ArgK protein; methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 104095..107382 Ralstonia pickettii 12J 6287811 YP_001897687.1 CDS Rpic_0090 NC_010682.1 107696 108550 D converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 107696..108550 Ralstonia pickettii 12J 6286593 YP_001897688.1 CDS Rpic_0091 NC_010682.1 108707 109564 D TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: rso:RSc0253 hypothetical protein; phenazine biosynthesis protein PhzF family 108707..109564 Ralstonia pickettii 12J 6286594 YP_001897689.1 CDS Rpic_0092 NC_010682.1 109582 110130 R PFAM: GCN5-related N-acetyltransferase; KEGG: bpl:BURPS1106A_3175 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(109582..110130) Ralstonia pickettii 12J 6286595 YP_001897690.1 CDS Rpic_0095 NC_010682.1 110413 111888 R PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: rso:RSc0254 hypothetical protein; hypothetical protein complement(110413..111888) Ralstonia pickettii 12J 6288704 YP_001897691.1 CDS Rpic_0096 NC_010682.1 112098 113081 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RSc0255 hypothetical protein; 2-nitropropane dioxygenase complement(112098..113081) Ralstonia pickettii 12J 6288705 YP_001897692.1 CDS Rpic_0097 NC_010682.1 113183 113731 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1164 peptidase C56, PfpI; PfpI family intracellular protease complement(113183..113731) Ralstonia pickettii 12J 6288706 YP_001897693.1 CDS Rpic_0098 NC_010682.1 113869 114795 D PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc0256 hypothetical haloacetate dehalogenase H-1 protein; alpha/beta hydrolase fold protein 113869..114795 Ralstonia pickettii 12J 6286565 YP_001897694.1 CDS Rpic_0099 NC_010682.1 114805 115488 R PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: bpm:BURPS1710b_A0200 putative hydroxylase; 2OG-Fe(II) oxygenase complement(114805..115488) Ralstonia pickettii 12J 6286566 YP_001897695.1 CDS Rpic_0100 NC_010682.1 115479 116249 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: bxe:Bxe_B0793 hypothetical protein; Sel1 domain-containing protein repeat-containing protein complement(115479..116249) Ralstonia pickettii 12J 6286567 YP_001897696.1 CDS Rpic_0101 NC_010682.1 116249 118528 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_B0794 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(116249..118528) Ralstonia pickettii 12J 6286568 YP_001897697.1 CDS Rpic_0102 NC_010682.1 118803 119582 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 118803..119582 Ralstonia pickettii 12J 6288206 YP_001897698.1 CDS Rpic_0103 NC_010682.1 119584 121356 D PFAM: protein of unknown function DUF1446; KEGG: reh:H16_B0988 hypothetical protein; hypothetical protein 119584..121356 Ralstonia pickettii 12J 6288207 YP_001897699.1 CDS Rpic_0104 NC_010682.1 121371 122525 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reu:Reut_B5206 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal; acyl-CoA dehydrogenase domain-containing protein 121371..122525 Ralstonia pickettii 12J 6288208 YP_001897700.1 CDS Rpic_0105 NC_010682.1 122547 123434 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_3507 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 122547..123434 Ralstonia pickettii 12J 6288209 YP_001897701.1 CDS Rpic_0106 NC_010682.1 123421 125040 D PFAM: carboxyl transferase; KEGG: bps:BPSS2031 acetyl-CoA carboxylase carboxyltransferase; carboxyl transferase 123421..125040 Ralstonia pickettii 12J 6286546 YP_001897702.1 CDS Rpic_0107 NC_010682.1 125090 126247 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: vei:Veis_1896 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 125090..126247 Ralstonia pickettii 12J 6286547 YP_001897703.1 CDS Rpic_0108 NC_010682.1 126251 128245 D PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: reu:Reut_B4460 biotin/lipoyl attachment:carbamoyl-phosphate synthase L chain, ATP-binding:carbamoyl-phosphate synthetase large chain, N-terminal:biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase L chain ATP-binding 126251..128245 Ralstonia pickettii 12J 6286548 YP_001897704.1 CDS Rpic_0109 NC_010682.1 128330 129916 D PFAM: AMP-dependent synthetase and ligase; KEGG: rpe:RPE_2253 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 128330..129916 Ralstonia pickettii 12J 6286549 YP_001897705.1 CDS Rpic_0110 NC_010682.1 129923 130600 R PFAM: regulatory protein TetR; KEGG: bpd:BURPS668_A2924 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(129923..130600) Ralstonia pickettii 12J 6287967 YP_001897706.1 CDS Rpic_0111 NC_010682.1 130662 131615 R PFAM: beta-lactamase domain protein; KEGG: rso:RSc0258 putative beta lactamase protein; beta-lactamase domain-containing protein complement(130662..131615) Ralstonia pickettii 12J 6287968 YP_001897707.1 CDS Rpic_0112 NC_010682.1 131628 131894 R PFAM: protein of unknown function DUF1289; KEGG: rso:RSc0259 hypothetical protein; hypothetical protein complement(131628..131894) Ralstonia pickettii 12J 6287969 YP_001897708.1 CDS Rpic_0113 NC_010682.1 131903 132403 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rso:RSc0260 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(131903..132403) Ralstonia pickettii 12J 6287970 YP_001897709.1 CDS Rpic_0114 NC_010682.1 132426 133355 R catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase complement(132426..133355) Ralstonia pickettii 12J 6288013 YP_001897710.1 CDS Rpic_0115 NC_010682.1 133357 134298 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rso:RSc0262 putative 2-hydroxyacid dehydrogenase oxidoreductase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(133357..134298) Ralstonia pickettii 12J 6288014 YP_001897711.1 CDS Rpic_0116 NC_010682.1 134385 136409 R PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rso:RSc0265 probable acyl-CoA carboxylase alpha chain protein; Carbamoyl-phosphate synthase L chain ATP-binding complement(134385..136409) Ralstonia pickettii 12J 6288015 YP_001897712.1 CDS Rpic_0117 NC_010682.1 137071 138150 R KEGG: rso:RSc0266 probable biotin synthase protein; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(137071..138150) Ralstonia pickettii 12J 6288016 YP_001897713.1 CDS Rpic_0118 NC_010682.1 138194 138988 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(138194..138988) Ralstonia pickettii 12J 6289440 YP_001897714.1 CDS Rpic_0119 NC_010682.1 138985 139923 R KEGG: rso:RSc0268 hypothetical signal peptide protein; hypothetical protein complement(138985..139923) Ralstonia pickettii 12J 6289441 YP_001897715.1 CDS Rpic_0120 NC_010682.1 139955 141562 R PFAM: carboxyl transferase; KEGG: rso:RSc0269 putative propionyl-CoA carboxylase (beta subunit) protein; propionyl-CoA carboxylase complement(139955..141562) Ralstonia pickettii 12J 6289442 YP_001897716.1 CDS Rpic_0121 NC_010682.1 141591 142031 R KEGG: rso:RSc0270 hypothetical protein; hypothetical protein complement(141591..142031) Ralstonia pickettii 12J 6289443 YP_001897717.1 CDS Rpic_0122 NC_010682.1 142031 142720 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc0271 hypothetical protein; HAD-superfamily hydrolase complement(142031..142720) Ralstonia pickettii 12J 6287788 YP_001897718.1 CDS Rpic_0123 NC_010682.1 142784 143389 R PFAM: DSBA oxidoreductase; KEGG: rso:RSc0273 putative 2-hydroxychromene-2-carboxylate isomerase protein; DSBA oxidoreductase complement(142784..143389) Ralstonia pickettii 12J 6287789 YP_001897719.1 CDS Rpic_0124 NC_010682.1 143431 144561 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc0274 putative acyl CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(143431..144561) Ralstonia pickettii 12J 6287790 YP_001897720.1 CDS Rpic_0125 NC_010682.1 144572 145285 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc0275 short chain dehydrogenase; short chain dehydrogenase complement(144572..145285) Ralstonia pickettii 12J 6287791 YP_001897721.1 CDS Rpic_0126 NC_010682.1 145295 146476 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(145295..146476) Ralstonia pickettii 12J 6289794 YP_001897722.1 CDS Rpic_0127 NC_010682.1 147143 147823 R PFAM: carbonic anhydrase; KEGG: rso:RSc0277 probable carbonic anhydrase protein; Carbonate dehydratase complement(147143..147823) Ralstonia pickettii 12J 6289795 YP_001897723.1 CDS aceK NC_010682.1 147847 149682 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(147847..149682) Ralstonia pickettii 12J 6289796 YP_001897724.1 CDS Rpic_0129 NC_010682.1 149838 151019 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc0279 probable acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(149838..151019) Ralstonia pickettii 12J 6289797 YP_001897725.1 CDS Rpic_0130 NC_010682.1 151197 151694 R PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rso:RSc0280 putative transcription regulator protein; MerR family transcriptional regulator complement(151197..151694) Ralstonia pickettii 12J 6289021 YP_001897726.1 CDS Rpic_0131 NC_010682.1 151879 152958 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc0281 hypothetical protein; beta-lactamase domain-containing protein 151879..152958 Ralstonia pickettii 12J 6289022 YP_001897727.1 CDS Rpic_0132 NC_010682.1 152993 153379 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rso:RSc0282 hypothetical protein; antibiotic biosynthesis monooxygenase 152993..153379 Ralstonia pickettii 12J 6289023 YP_001897728.1 CDS Rpic_0133 NC_010682.1 153445 154290 R KEGG: rso:RSc0283 hypothetical protein; hypothetical protein complement(153445..154290) Ralstonia pickettii 12J 6289024 YP_001897729.1 CDS Rpic_0134 NC_010682.1 154287 155087 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc0284 short chain dehydrogenase; short chain dehydrogenase complement(154287..155087) Ralstonia pickettii 12J 6288028 YP_001897730.1 CDS Rpic_0135 NC_010682.1 155200 155856 R PFAM: DSBA oxidoreductase; KEGG: rso:RSc0285 probable thiol:disulfide interchange signal peptide protein; DSBA oxidoreductase complement(155200..155856) Ralstonia pickettii 12J 6288029 YP_001897731.1 CDS Rpic_0136 NC_010682.1 156017 156727 R PFAM: Sporulation domain protein; KEGG: rso:RSc0286 hypothetical protein; sporulation domain-containing protein complement(156017..156727) Ralstonia pickettii 12J 6288030 YP_001897732.1 CDS argS NC_010682.1 156788 158578 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(156788..158578) Ralstonia pickettii 12J 6288031 YP_001897733.1 CDS Rpic_0138 NC_010682.1 158753 159076 D PFAM: Domain of unknown function DUF1840; KEGG: rso:RSc0288 hypothetical protein; hypothetical protein 158753..159076 Ralstonia pickettii 12J 6288647 YP_001897734.1 CDS Rpic_0139 NC_010682.1 159205 159762 R PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: reu:Reut_A2901 rubrerythrin:ferritin and Dps; ferritin Dps family protein complement(159205..159762) Ralstonia pickettii 12J 6288648 YP_001897735.1 CDS Rpic_0140 NC_010682.1 159796 160224 R KEGG: reu:Reut_A0125 protein of unknown function DUF883, ElaB; hypothetical protein complement(159796..160224) Ralstonia pickettii 12J 6288649 YP_001897736.1 CDS Rpic_0141 NC_010682.1 160369 160542 R PFAM: protein of unknown function DUF1328; KEGG: cak:Caul_4145 protein of unknown function DUF1328; hypothetical protein complement(160369..160542) Ralstonia pickettii 12J 6288650 YP_001897737.1 CDS Rpic_0142 NC_010682.1 160751 162208 D PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rso:RSc0289 transmembrane sensor kinase VsrA transcription regulator protein; multi-sensor signal transduction histidine kinase 160751..162208 Ralstonia pickettii 12J 6288354 YP_001897738.1 CDS Rpic_0143 NC_010682.1 162293 162433 R PFAM: Entericidin EcnAB; KEGG: rso:RSc0290 probable entericidin precursor lipoprotein; entericidin EcnAB complement(162293..162433) Ralstonia pickettii 12J 6288355 YP_001897739.1 CDS Rpic_0144 NC_010682.1 162504 162944 R PFAM: response regulator receiver; KEGG: rso:RSc0291 putative transcription regulator protein; response regulator receiver protein complement(162504..162944) Ralstonia pickettii 12J 6288356 YP_001897740.1 CDS Rpic_0145 NC_010682.1 163047 163679 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rso:RSc0292 response regulator transcription regulator protein; two component LuxR family transcriptional regulator complement(163047..163679) Ralstonia pickettii 12J 6288357 YP_001897741.1 CDS Rpic_0146 NC_010682.1 163990 164403 R KEGG: rso:RSc0293 hypothetical signal peptide protein; hypothetical protein complement(163990..164403) Ralstonia pickettii 12J 6288828 YP_001897742.1 CDS Rpic_0147 NC_010682.1 164645 167362 R KEGG: rso:RSc0294 probable 5-methyltetrahydrofolate--homocysteine methyltransferase (methionine synthase, vitamin-B12 dependent isozyme) protein; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; methionine synthase complement(164645..167362) Ralstonia pickettii 12J 6288829 YP_001897743.1 CDS Rpic_0148 NC_010682.1 167380 167733 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aav:Aave_3654 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(167380..167733) Ralstonia pickettii 12J 6288830 YP_001897744.1 CDS Rpic_0149 NC_010682.1 167735 168775 R PFAM: homocysteine S-methyltransferase; KEGG: rso:RSc0295 probable 5-methyltetrahydrofolate--homocysteine methyltransferase (methionine synthase, vitamin-B12 dependent isozyme) protein; homocysteine S-methyltransferase complement(167735..168775) Ralstonia pickettii 12J 6288831 YP_001897745.1 CDS Rpic_0150 NC_010682.1 168927 169319 D PFAM: Rhodanese domain protein; KEGG: rso:RSc0296 hypothetical protein; rhodanese domain-containing protein 168927..169319 Ralstonia pickettii 12J 6287137 YP_001897746.1 CDS Rpic_0151 NC_010682.1 169433 169690 R KEGG: rso:RSc0297 hypothetical protein; hypothetical protein complement(169433..169690) Ralstonia pickettii 12J 6287138 YP_001897747.1 CDS Rpic_0152 NC_010682.1 170010 170849 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc0298 probable B-ketoadipate enol-lactone hydrolase protein; alpha/beta hydrolase fold protein complement(170010..170849) Ralstonia pickettii 12J 6287139 YP_001897748.1 CDS Rpic_0153 NC_010682.1 170851 171933 R KEGG: rso:RSc0299 putative proline-rich signal peptide protein; putative proline-rich signal peptide protein complement(170851..171933) Ralstonia pickettii 12J 6287140 YP_001897749.1 CDS Rpic_0154 NC_010682.1 171953 172831 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rso:RSc0300 probable transcription regulator protein; IclR family transcriptional regulator complement(171953..172831) Ralstonia pickettii 12J 6289304 YP_001897750.1 CDS Rpic_0155 NC_010682.1 172908 173900 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rso:RSc0301 hypothetical protein; fumarylacetoacetate (FAA) hydrolase 172908..173900 Ralstonia pickettii 12J 6289305 YP_001897751.1 CDS Rpic_0156 NC_010682.1 173909 174817 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rso:RSc0302 probable transcription regulator protein; IclR family transcriptional regulator complement(173909..174817) Ralstonia pickettii 12J 6289306 YP_001897752.1 CDS Rpic_0157 NC_010682.1 174921 175925 D PFAM: Luciferase-like monooxygenase; KEGG: sso:SSO1532 hypothetical protein; luciferase-like monooxygenase 174921..175925 Ralstonia pickettii 12J 6289307 YP_001897753.1 CDS Rpic_0158 NC_010682.1 176010 177173 D PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A4234 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor 176010..177173 Ralstonia pickettii 12J 6288009 YP_001897754.1 CDS Rpic_0159 NC_010682.1 177254 178072 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 177254..178072 Ralstonia pickettii 12J 6288010 YP_001897755.1 CDS Rpic_0160 NC_010682.1 178129 179022 D KEGG: rso:RSc0305 hypothetical protein; hypothetical protein 178129..179022 Ralstonia pickettii 12J 6288011 YP_001897756.1 CDS Rpic_0161 NC_010682.1 179053 180210 D PFAM: Patatin; KEGG: rso:RSc0306 hypothetical protein; patatin 179053..180210 Ralstonia pickettii 12J 6288012 YP_001897757.1 CDS Rpic_0162 NC_010682.1 180211 180906 R PFAM: glutathione peroxidase; KEGG: rso:RSc0307 putative glutathione peroxidase transmembrane protein; glutathione peroxidase complement(180211..180906) Ralstonia pickettii 12J 6289810 YP_001897758.1 CDS Rpic_0163 NC_010682.1 181310 182164 D KEGG: rso:RSc0308 hypothetical protein; hypothetical protein 181310..182164 Ralstonia pickettii 12J 6289811 YP_001897759.1 CDS Rpic_0164 NC_010682.1 182200 182736 D TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: rso:RSc0309 putative transferase protein; bifunctional protein RfaE 182200..182736 Ralstonia pickettii 12J 6289812 YP_001897760.1 CDS Rpic_0165 NC_010682.1 182741 183526 R PFAM: Sporulation domain protein; KEGG: rso:RSc0310 putative signal peptide protein; sporulation domain-containing protein complement(182741..183526) Ralstonia pickettii 12J 6289813 YP_001897761.1 CDS Rpic_0166 NC_010682.1 183629 184510 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(183629..184510) Ralstonia pickettii 12J 6287276 YP_001897762.1 CDS Rpic_0167 NC_010682.1 184507 185388 R catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase complement(184507..185388) Ralstonia pickettii 12J 6287277 YP_001897763.1 CDS Rpic_0168 NC_010682.1 185574 186698 D PFAM: protein of unknown function DUF140; KEGG: rso:RSc0313 probable transmembrane protein; hypothetical protein 185574..186698 Ralstonia pickettii 12J 6287278 YP_001897764.1 CDS Rpic_0169 NC_010682.1 186695 187573 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0314 probable ATP-binding ABC transporter protein; ABC transporter-like protein 186695..187573 Ralstonia pickettii 12J 6287279 YP_001897765.1 CDS Rpic_0170 NC_010682.1 187573 188541 D PFAM: Mammalian cell entry related domain protein; KEGG: rso:RSc0315 probable signal peptide protein; mammalian cell entry domain-containing protein 187573..188541 Ralstonia pickettii 12J 6286506 YP_001897766.1 CDS Rpic_0171 NC_010682.1 188551 189216 D KEGG: rso:RSc0316 probable lipoprotein; putative lipoprotein 188551..189216 Ralstonia pickettii 12J 6286507 YP_001897767.1 CDS Rpic_0172 NC_010682.1 189255 190520 D PFAM: VanZ family protein; KEGG: rso:RSc0317 probable transmembrane protein; VanZ family protein 189255..190520 Ralstonia pickettii 12J 6286508 YP_001897768.1 CDS Rpic_0173 NC_010682.1 190508 191752 R PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B3681 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(190508..191752) Ralstonia pickettii 12J 6286509 YP_001897769.1 CDS Rpic_0174 NC_010682.1 191749 193716 R PFAM: IucA/IucC family protein; KEGG: bbt:BBta_0635 putative siderophore biosynthesis protein; IucA/IucC family protein complement(191749..193716) Ralstonia pickettii 12J 6288868 YP_001897770.1 CDS Rpic_0175 NC_010682.1 194325 196427 D KEGG: rso:RSc0319 probable non-hemolytic phospholipase C (phosphatidylcholine cholinephosphohydrolase) signal peptide protein; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phosphocholine-specific phospholipase C 194325..196427 Ralstonia pickettii 12J 6288869 YP_001897771.1 CDS Rpic_0176 NC_010682.1 196502 196612 R hypothetical protein complement(196502..196612) Ralstonia pickettii 12J 6288870 YP_001897772.1 CDS Rpic_0177 NC_010682.1 196922 197383 D KEGG: rso:RSc0320 hypothetical protein; hypothetical protein 196922..197383 Ralstonia pickettii 12J 6288871 YP_001897773.1 CDS Rpic_0178 NC_010682.1 197460 198461 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(197460..198461) Ralstonia pickettii 12J 6289347 YP_001897774.1 CDS lipB NC_010682.1 198504 199193 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(198504..199193) Ralstonia pickettii 12J 6289348 YP_001897775.1 CDS Rpic_0180 NC_010682.1 199354 199713 R KEGG: rso:RSc0324 hypothetical protein; hypothetical protein complement(199354..199713) Ralstonia pickettii 12J 6289349 YP_001897776.1 CDS Rpic_0181 NC_010682.1 199864 200826 D Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 199864..200826 Ralstonia pickettii 12J 6289350 YP_001897777.1 CDS Rpic_0182 NC_010682.1 200916 201215 R PFAM: protein of unknown function DUF493; KEGG: rso:RSc0326 hypothetical protein; hypothetical protein complement(200916..201215) Ralstonia pickettii 12J 6287432 YP_001897778.1 CDS Rpic_0183 NC_010682.1 201236 202438 R PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rso:RSc0327 probable penicillin-binding (D-alanyl-D-alanine carboxypeptidase) transmembrane protein; serine-type D-Ala-D-Ala carboxypeptidase complement(201236..202438) Ralstonia pickettii 12J 6287433 YP_001897779.1 CDS Rpic_0184 NC_010682.1 202533 203180 R KEGG: rso:RSc0328 probable transmembrane protein; hypothetical protein complement(202533..203180) Ralstonia pickettii 12J 6287434 YP_001897780.1 CDS Rpic_0185 NC_010682.1 203216 203545 R KEGG: rso:RSc0329 putative ferredoxin 2Fe-2S protein; putative ferredoxin 2Fe-2S protein complement(203216..203545) Ralstonia pickettii 12J 6287435 YP_001897781.1 CDS Rpic_0186 NC_010682.1 203997 205286 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 203997..205286 Ralstonia pickettii 12J 6289286 YP_001897782.1 CDS Rpic_0187 NC_010682.1 205388 207406 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc0331 probable C4-dicarboxylate transport sensor kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase 205388..207406 Ralstonia pickettii 12J 6289287 YP_001897783.1 CDS Rpic_0188 NC_010682.1 207432 208748 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RSc0332 probable C4-dicarboxylate transport response regulator transcription regulator protein; Fis family two component sigma-54 specific transcriptional regulator 207432..208748 Ralstonia pickettii 12J 6289288 YP_001897784.1 CDS Rpic_0189 NC_010682.1 208806 209543 R KEGG: rso:RSc1547 hypothetical protein; hypothetical protein complement(208806..209543) Ralstonia pickettii 12J 6289289 YP_001897785.1 CDS Rpic_0190 NC_010682.1 209683 210243 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc0333 putative transmembrane protein; redoxin domain-containing protein complement(209683..210243) Ralstonia pickettii 12J 6287991 YP_001897786.1 CDS Rpic_0191 NC_010682.1 210346 210858 R PFAM: Appr-1-p processing domain protein; KEGG: rso:RSc0334 hypothetical protein; hypothetical protein complement(210346..210858) Ralstonia pickettii 12J 6287992 YP_001897787.1 CDS Rpic_0192 NC_010682.1 210943 211512 D KEGG: rso:RSc0335 putative transmembrane protein; hypothetical protein 210943..211512 Ralstonia pickettii 12J 6287993 YP_001897788.1 CDS Rpic_0193 NC_010682.1 211603 212244 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: reu:Reut_A0287 lysine exporter protein (LysE/YggA); Lysine exporter protein LysE/YggA 211603..212244 Ralstonia pickettii 12J 6287994 YP_001897789.1 CDS Rpic_0194 NC_010682.1 212305 213837 R KEGG: rso:RSc0338 probable Mg(2+) chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI complement(212305..213837) Ralstonia pickettii 12J 6286681 YP_001897790.1 CDS Rpic_0195 NC_010682.1 214052 214564 R KEGG: rso:RSc0339 probable transmembrane protein; hypothetical protein complement(214052..214564) Ralstonia pickettii 12J 6286682 YP_001897791.1 CDS Rpic_0196 NC_010682.1 214742 214999 R PFAM: protein of unknown function DUF526; KEGG: rso:RSc0340 hypothetical protein; hypothetical protein complement(214742..214999) Ralstonia pickettii 12J 6286683 YP_001897792.1 CDS Rpic_0197 NC_010682.1 215532 216347 D PFAM: conserved hypothetical protein; KEGG: rso:RSc0341 probable signal peptide protein; hypothetical protein 215532..216347 Ralstonia pickettii 12J 6286684 YP_001897793.1 CDS Rpic_0198 NC_010682.1 216394 216732 D PFAM: nitrogen regulatory protein P-II; KEGG: rso:RSc0342 probable nitrogen regulatory P-II transcription regulator protein; nitrogen regulatory protein P-II 216394..216732 Ralstonia pickettii 12J 6286805 YP_001897794.1 CDS Rpic_0199 NC_010682.1 216763 218310 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: reh:H16_A0321 ammonium transporter; ammonium transporter 216763..218310 Ralstonia pickettii 12J 6286806 YP_001897795.1 CDS Rpic_0200 NC_010682.1 218677 219972 D TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: rso:RSc0344 hypothetical protein; glutamate/cysteine ligase 218677..219972 Ralstonia pickettii 12J 6286807 YP_001897796.1 CDS Rpic_0201 NC_010682.1 220005 220976 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 220005..220976 Ralstonia pickettii 12J 6286808 YP_001897797.1 CDS Rpic_0202 NC_010682.1 221096 221551 D PFAM: PTS system fructose subfamily IIA component; KEGG: rso:RSc0346 hypothetical protein; PTS system fructose subfamily transporter subunit IIA 221096..221551 Ralstonia pickettii 12J 6287932 YP_001897798.1 CDS Rpic_0203 NC_010682.1 221520 221789 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: rso:RSc0347 probable phosphocarrier protein HPr (phosphohistidinoprotein-hexose phosphotransferase); phosphotransferase system, phosphocarrier protein HPr 221520..221789 Ralstonia pickettii 12J 6287933 YP_001897799.1 CDS Rpic_0204 NC_010682.1 221835 223586 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: rso:RSc0348 probable phosphoenolpyruvate-protein phosphotransferase transmembrane; phosphoenolpyruvate-protein phosphotransferase 221835..223586 Ralstonia pickettii 12J 6287934 YP_001897800.1 CDS Rpic_0205 NC_010682.1 223817 224092 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rso:RSc0349 putative bacterioferritin-associated ferredoxin protein; BFD (2Fe-2S)-binding domain-containing protein 223817..224092 Ralstonia pickettii 12J 6287935 YP_001897801.1 CDS Rpic_0206 NC_010682.1 224241 224720 D TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: rso:RSc0350 probable bacterioferritin BFR (cytochrome b-1) (cytochrome b-557) protein; bacterioferritin 224241..224720 Ralstonia pickettii 12J 6286191 YP_001897802.1 CDS Rpic_0207 NC_010682.1 224786 225535 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: rso:RSc0351 molybdopterin biosynthesis protein MoeB; UBA/THIF-type NAD/FAD binding protein complement(224786..225535) Ralstonia pickettii 12J 6286192 YP_001897803.1 CDS Rpic_0208 NC_010682.1 225605 227221 R KEGG: rso:RSc0352 putative carboxy-terminal processing protease transmembrane protein; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(225605..227221) Ralstonia pickettii 12J 6286193 YP_001897804.1 CDS gpmA NC_010682.1 227340 228095 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(227340..228095) Ralstonia pickettii 12J 6286194 YP_001897805.1 CDS Rpic_0210 NC_010682.1 228261 228683 D PFAM: Rhodanese domain protein; KEGG: rso:RSc0354 probable transmembrane protein; rhodanese domain-containing protein 228261..228683 Ralstonia pickettii 12J 6288608 YP_001897806.1 CDS Rpic_0211 NC_010682.1 228702 228959 D TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: rso:RSc0355 probable glutaredoxin 3 (GRX3) protein; glutaredoxin 3 228702..228959 Ralstonia pickettii 12J 6288609 YP_001897807.1 CDS Rpic_0212 NC_010682.1 229120 229638 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 229120..229638 Ralstonia pickettii 12J 6288610 YP_001897808.1 CDS gpsA NC_010682.1 229731 230762 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 229731..230762 Ralstonia pickettii 12J 6288611 YP_001897809.1 CDS Rpic_0214 NC_010682.1 230792 231262 R TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rso:RSc0358 putative tRNA/rRNA methyltransferase protein; TrmH family RNA methyltransferase complement(230792..231262) Ralstonia pickettii 12J 6288036 YP_001897810.1 CDS Rpic_0215 NC_010682.1 231374 232096 R KEGG: rso:RSc0359 putative competence protein F-related protein; putative competence protein F-like protein complement(231374..232096) Ralstonia pickettii 12J 6288037 YP_001897811.1 CDS Rpic_0216 NC_010682.1 232205 233146 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc0360 putative biotin synthesis protein (methyltransferase); type 11 methyltransferase 232205..233146 Ralstonia pickettii 12J 6288038 YP_001897812.1 CDS Rpic_0218 NC_010682.1 233773 235029 D TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: rso:RSc0362 putative cytochrome c oxidase polypeptide II precursor (cytochrome AA3 subunit 2) transmembrane protein; cytochrome c oxidase subunit II 233773..235029 Ralstonia pickettii 12J 6288667 YP_001897813.1 CDS Rpic_0219 NC_010682.1 235070 236674 D KEGG: rso:RSc0363 probable cytochrome c oxidase polypeptide I (cytochrome AA3 subunit 1) transmembrane protein; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 235070..236674 Ralstonia pickettii 12J 6288668 YP_001897814.1 CDS Rpic_0220 NC_010682.1 236728 236859 D KEGG: rso:RSc0364 hypothetical protein; hypothetical protein 236728..236859 Ralstonia pickettii 12J 6288669 YP_001897815.1 CDS Rpic_0221 NC_010682.1 236909 237517 D involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 236909..237517 Ralstonia pickettii 12J 6288670 YP_001897816.1 CDS Rpic_0222 NC_010682.1 237522 237734 D KEGG: rso:RSc0366 probable transmembrane protein; hypothetical protein 237522..237734 Ralstonia pickettii 12J 6287025 YP_001897817.1 CDS Rpic_0223 NC_010682.1 237823 238683 D PFAM: cytochrome c oxidase subunit III; KEGG: rso:RSc0367 probable cytochrome c oxidase subunit III transmembrane protein; cytochrome c oxidase subunit III 237823..238683 Ralstonia pickettii 12J 6287026 YP_001897818.1 CDS Rpic_0224 NC_010682.1 238809 239018 R KEGG: rso:RSc0368 probable transmembrane protein; hypothetical protein complement(238809..239018) Ralstonia pickettii 12J 6287027 YP_001897819.1 CDS Rpic_0225 NC_010682.1 239088 239858 D KEGG: rso:RSc0369 putative transmembrane cytochrome oxidase complex biogenesis factor transmembrane protein; putative transmembrane cytochrome oxidase complex biogenesis factor transmembrane protein 239088..239858 Ralstonia pickettii 12J 6287028 YP_001897820.1 CDS Rpic_0226 NC_010682.1 239911 240567 D KEGG: rso:RSc0370 probable transmembrane protein; hypothetical protein 239911..240567 Ralstonia pickettii 12J 6288194 YP_001897821.1 CDS Rpic_0227 NC_010682.1 240571 241662 D PFAM: cytochrome oxidase assembly; KEGG: rso:RSc0371 putative heme O oxygenase (cytochrome AA3-controlling) transmembrane protein; cytochrome oxidase assembly 240571..241662 Ralstonia pickettii 12J 6288195 YP_001897822.1 CDS Rpic_0228 NC_010682.1 241683 242624 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 241683..242624 Ralstonia pickettii 12J 6288196 YP_001897823.1 CDS Rpic_0229 NC_010682.1 242688 243299 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: rso:RSc0373 probable lipoprotein; electron transport protein SCO1/SenC 242688..243299 Ralstonia pickettii 12J 6288197 YP_001897824.1 CDS Rpic_0230 NC_010682.1 243366 244295 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(243366..244295) Ralstonia pickettii 12J 6289667 YP_001897825.1 CDS Rpic_0231 NC_010682.1 244494 247412 R KEGG: rso:RSc0375 probable transmembrane protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor containing diguanylate cyclase complement(244494..247412) Ralstonia pickettii 12J 6289668 YP_001897826.1 CDS Rpic_0232 NC_010682.1 247654 248058 D PFAM: OsmC family protein; KEGG: rso:RSc0376 hypothetical protein; OsmC family protein 247654..248058 Ralstonia pickettii 12J 6289669 YP_001897827.1 CDS Rpic_0233 NC_010682.1 248072 248941 D PFAM: Pirin domain protein; KEGG: rso:RSc0377 putative pirin-like protein; Pirin domain-containing protein 248072..248941 Ralstonia pickettii 12J 6289670 YP_001897828.1 CDS Rpic_0234 NC_010682.1 248956 249966 R PFAM: glycosyl transferase family 3; KEGG: rso:RSc0378 hypothetical protein; glycosyl transferase family protein complement(248956..249966) Ralstonia pickettii 12J 6289543 YP_001897829.1 CDS Rpic_0235 NC_010682.1 250142 250945 R KEGG: rso:RSc0379 putative nitrate ATP-binding ABC transporter protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D complement(250142..250945) Ralstonia pickettii 12J 6289544 YP_001897830.1 CDS Rpic_0236 NC_010682.1 250963 251814 R TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc0380 putative nitrate transmembrane ABC transporter protein; nitrate ABC transporter inner membrane subunit complement(250963..251814) Ralstonia pickettii 12J 6289545 YP_001897831.1 CDS Rpic_0237 NC_010682.1 251870 253150 R KEGG: rso:RSc0381 putative nitrate transporter protein; putative nitrate transporter protein complement(251870..253150) Ralstonia pickettii 12J 6289546 YP_001897832.1 CDS Rpic_0238 NC_010682.1 253722 254360 R PFAM: ANTAR domain protein; KEGG: rso:RSc0382 probable response regulator transcription regulator protein; response regulator receiver and ANTAR domain-containing protein complement(253722..254360) Ralstonia pickettii 12J 6288315 YP_001897833.1 CDS Rpic_0239 NC_010682.1 254508 255209 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rso:RSc0383 hypothetical protein; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 254508..255209 Ralstonia pickettii 12J 6288316 YP_001897834.1 CDS Rpic_0240 NC_010682.1 255236 255886 D TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0384 probable maleylacetoacetate isomerase (glutathione transferase zeta 1) protein; maleylacetoacetate isomerase 255236..255886 Ralstonia pickettii 12J 6288317 YP_001897835.1 CDS Rpic_0241 NC_010682.1 255967 257151 R KEGG: rso:RSc0386 putative cell division protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY complement(255967..257151) Ralstonia pickettii 12J 6288318 YP_001897836.1 CDS Rpic_0242 NC_010682.1 257275 258708 D PFAM: peptidase M16 domain protein; KEGG: rso:RSc0387 putative zinc protease protein; peptidase M16 domain-containing protein 257275..258708 Ralstonia pickettii 12J 6288525 YP_001897837.1 CDS Rpic_0243 NC_010682.1 258708 260060 D PFAM: peptidase M16 domain protein; KEGG: rso:RSc0388 putative zinc protease-like signal peptide protein; peptidase M16 domain-containing protein 258708..260060 Ralstonia pickettii 12J 6288526 YP_001897838.1 CDS Rpic_0244 NC_010682.1 260154 260810 D TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: rso:RSc0389 hypothetical protein; methyltransferase 260154..260810 Ralstonia pickettii 12J 6288527 YP_001897839.1 CDS coaD NC_010682.1 261008 261511 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 261008..261511 Ralstonia pickettii 12J 6288528 YP_001897840.1 CDS Rpic_0246 NC_010682.1 261562 261825 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RSc0391 probable ferredoxin protein; 4Fe-4S ferredoxin 261562..261825 Ralstonia pickettii 12J 6288146 YP_001897841.1 CDS Rpic_0247 NC_010682.1 261893 262528 R KEGG: rso:RSc0392 probable proline-rich transmembrane protein; putative proline-rich transmembrane protein complement(261893..262528) Ralstonia pickettii 12J 6288147 YP_001897842.1 CDS Rpic_0248 NC_010682.1 262553 263155 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(262553..263155) Ralstonia pickettii 12J 6288148 YP_001897843.1 CDS Rpic_0249 NC_010682.1 263325 263951 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(263325..263951) Ralstonia pickettii 12J 6288149 YP_001897844.1 CDS Rpic_0250 NC_010682.1 264104 265054 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(264104..265054) Ralstonia pickettii 12J 6289085 YP_001897845.1 CDS ipk NC_010682.1 265262 266131 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(265262..266131) Ralstonia pickettii 12J 6289087 YP_001897846.1 CDS lolB NC_010682.1 266146 266769 R Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB complement(266146..266769) Ralstonia pickettii 12J 6286865 YP_001897847.1 CDS Rpic_0253 NC_010682.1 266769 268706 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rso:RSc0398 hypothetical protein; hypothetical protein complement(266769..268706) Ralstonia pickettii 12J 6286866 YP_001897848.1 CDS Rpic_0254 NC_010682.1 268808 269683 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 268808..269683 Ralstonia pickettii 12J 6286867 YP_001897849.1 CDS Rpic_0255 NC_010682.1 269969 271915 D KEGG: rso:RSc0400 hypothetical protein; hypothetical protein 269969..271915 Ralstonia pickettii 12J 6286868 YP_001897850.1 CDS Rpic_0256 NC_010682.1 272019 273167 D TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: rso:RSc0401 probable A/G-specific adenine glycosylase protein; A/G-specific adenine glycosylase 272019..273167 Ralstonia pickettii 12J 6287983 YP_001897851.1 CDS Rpic_0257 NC_010682.1 273198 273851 R PFAM: peptidase S16 lon domain protein; KEGG: rso:RSc0402 hypothetical protein; peptidase S16 lon domain-containing protein complement(273198..273851) Ralstonia pickettii 12J 6287984 YP_001897852.1 CDS Rpic_0258 NC_010682.1 273954 274847 R PFAM: conserved hypothetical protein; KEGG: rso:RSc0403 hypothetical protein; hypothetical protein complement(273954..274847) Ralstonia pickettii 12J 6287985 YP_001897853.1 CDS Rpic_0259 NC_010682.1 274942 275283 R KEGG: rso:RSc0404 hypothetical signal peptide protein; hypothetical protein complement(274942..275283) Ralstonia pickettii 12J 6287986 YP_001897854.1 CDS Rpic_0260 NC_010682.1 275471 276445 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(275471..276445) Ralstonia pickettii 12J 6289262 YP_001897855.1 CDS Rpic_0261 NC_010682.1 276519 276974 R TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: rso:RSc0406 putative nitrogen regulatory IIA (enzyme IIA-NTR) (phosphotransferase enzyme II, A component) transcription regulator protein; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(276519..276974) Ralstonia pickettii 12J 6289263 YP_001897856.1 CDS Rpic_0262 NC_010682.1 277321 277674 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rso:RSc0407 putative sigma-54 modulation protein; sigma 54 modulation protein/30S ribosomal protein S30EA complement(277321..277674) Ralstonia pickettii 12J 6289264 YP_001897857.1 CDS Rpic_0263 NC_010682.1 277725 279236 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(277725..279236) Ralstonia pickettii 12J 6289265 YP_001897858.1 CDS Rpic_0264 NC_010682.1 279333 280121 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0409 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(279333..280121) Ralstonia pickettii 12J 6288287 YP_001897859.1 CDS Rpic_0265 NC_010682.1 280152 280739 R TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: rso:RSc0410 putative signal peptide protein; lipopolysaccharide transport periplasmic protein LptA complement(280152..280739) Ralstonia pickettii 12J 6288288 YP_001897860.1 CDS Rpic_0266 NC_010682.1 280799 281431 R PFAM: protein of unknown function DUF1239; KEGG: rso:RSc0411 probable transmembrane protein; hypothetical protein complement(280799..281431) Ralstonia pickettii 12J 6288289 YP_001897861.1 CDS Rpic_0267 NC_010682.1 281436 282032 R TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: rso:RSc0412 hypothetical protein; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(281436..282032) Ralstonia pickettii 12J 6288290 YP_001897862.1 CDS Rpic_0268 NC_010682.1 282049 283032 R KEGG: rso:RSc0413 hypothetical protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein complement(282049..283032) Ralstonia pickettii 12J 6286605 YP_001897863.1 CDS Rpic_0269 NC_010682.1 283343 285322 D PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: rso:RSc0414 putative glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein; sodium/hydrogen exchanger 283343..285322 Ralstonia pickettii 12J 6286606 YP_001897864.1 CDS Rpic_0270 NC_010682.1 285332 285736 R KEGG: rso:RSc0415 hypothetical protein; hypothetical protein complement(285332..285736) Ralstonia pickettii 12J 6286607 YP_001897865.1 CDS Rpic_0271 NC_010682.1 285777 286355 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rso:RSc0416 hypothetical protein; PfpI family intracellular protease complement(285777..286355) Ralstonia pickettii 12J 6286608 YP_001897866.1 CDS Rpic_0272 NC_010682.1 286464 287072 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 286464..287072 Ralstonia pickettii 12J 6289167 YP_001897867.1 CDS Rpic_0273 NC_010682.1 287198 287815 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc0418 probable transport transmembrane protein; Lysine exporter protein LysE/YggA 287198..287815 Ralstonia pickettii 12J 6289168 YP_001897868.1 CDS Rpic_0274 NC_010682.1 287846 288331 R PFAM: protein of unknown function DUF355; KEGG: rso:RSc0419 probable transmembrane protein; hypothetical protein complement(287846..288331) Ralstonia pickettii 12J 6289169 YP_001897869.1 CDS Rpic_0275 NC_010682.1 288415 291279 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: rso:RSc0420 probable excinuclease ABC subunit A (DNA repair ATP-binding) ABC transporter protein; excinuclease ABC subunit A complement(288415..291279) Ralstonia pickettii 12J 6289170 YP_001897870.1 CDS Rpic_0276 NC_010682.1 291522 292685 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc0421 putative multidrug-efflux transporter transmembrane protein; major facilitator superfamily protein 291522..292685 Ralstonia pickettii 12J 6287292 YP_001897871.1 CDS Rpic_0277 NC_010682.1 292737 293294 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 292737..293294 Ralstonia pickettii 12J 6287293 YP_001897872.1 CDS Rpic_0278 NC_010682.1 293506 293931 D KEGG: eca:ECA1059 putative integrase; hypothetical protein 293506..293931 Ralstonia pickettii 12J 6287294 YP_001897873.1 CDS Rpic_0280 NC_010682.1 295113 295919 D PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4; transposase IS4 family protein 295113..295919 Ralstonia pickettii 12J 6287440 YP_001897874.1 CDS Rpic_0281 NC_010682.1 297160 297495 R hypothetical protein complement(297160..297495) Ralstonia pickettii 12J 6287441 YP_001897875.1 CDS Rpic_0282 NC_010682.1 298828 299634 D PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4; transposase IS4 family protein 298828..299634 Ralstonia pickettii 12J 6287442 YP_001897876.1 CDS Rpic_0283 NC_010682.1 299866 303531 D KEGG: rfr:Rfer_1983 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 299866..303531 Ralstonia pickettii 12J 6287443 YP_001897877.1 CDS Rpic_0285 NC_010682.1 304111 306174 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: reh:H16_B1055 transcriptional regulator, PspF-family; GAF modulated sigma54 specific transcriptional regulator complement(304111..306174) Ralstonia pickettii 12J 6288272 YP_001897878.1 CDS Rpic_0286 NC_010682.1 306623 306697 D PFAM: coenzyme PQQ biosynthesis protein A; KEGG: mfa:Mfla_0021 coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A 306623..306697 Ralstonia pickettii 12J 6288273 YP_001897879.1 CDS Rpic_0287 NC_010682.1 306893 308152 D KEGG: rsh:Rsph17029_1399 putative glucose/sorbosone dehydrogenase; putative glucose/sorbosone dehydrogenase 306893..308152 Ralstonia pickettii 12J 6288274 YP_001897880.1 CDS Rpic_0288 NC_010682.1 308139 308462 D PFAM: cytochrome c class I; KEGG: psa:PST_0367 hypothetical protein; cytochrome c class I 308139..308462 Ralstonia pickettii 12J 6288798 YP_001897881.1 CDS Rpic_0289 NC_010682.1 308553 309488 D possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 308553..309488 Ralstonia pickettii 12J 6288799 YP_001897882.1 CDS Rpic_0290 NC_010682.1 309485 310198 D Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 309485..310198 Ralstonia pickettii 12J 6288800 YP_001897883.1 CDS Rpic_0291 NC_010682.1 310209 310469 D PFAM: coenzyme PQQ synthesis D; KEGG: bxe:Bxe_B2469 pyrroloquinoline quinone synthesis D; coenzyme PQQ synthesis D 310209..310469 Ralstonia pickettii 12J 6288801 YP_001897884.1 CDS Rpic_0292 NC_010682.1 310466 311626 D KEGG: pna:Pnap_0729 coenzyme PQQ biosynthesis protein E; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; pyrroloquinoline quinone biosynthesis protein PqqE 310466..311626 Ralstonia pickettii 12J 6287575 YP_001897885.1 CDS Rpic_0294 NC_010682.1 311890 313386 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_0544 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(311890..313386) Ralstonia pickettii 12J 6287577 YP_001897886.1 CDS Rpic_0295 NC_010682.1 313383 314111 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_0543 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator complement(313383..314111) Ralstonia pickettii 12J 6287578 YP_001897887.1 CDS Rpic_0296 NC_010682.1 314244 314918 D KEGG: dac:Daci_3135 thiosulfate reductase cytochrome b subunit (membrane anchoring protein); thiosulfate reductase cytochrome subunit B 314244..314918 Ralstonia pickettii 12J 6286149 YP_001897888.1 CDS Rpic_0297 NC_010682.1 314927 315718 D PFAM: oxidoreductase molybdopterin binding; KEGG: dac:Daci_3134 oxidoreductase molybdopterin binding; molybdopterin binding oxidoreductase 314927..315718 Ralstonia pickettii 12J 6286150 YP_001897889.1 CDS Rpic_0298 NC_010682.1 315839 316168 D TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: dac:Daci_3133 pentapeptide MXKDX repeat protein; pentapeptide MXKDX repeat-containing protein 315839..316168 Ralstonia pickettii 12J 6286151 YP_001897890.1 CDS Rpic_0299 NC_010682.1 316214 317614 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: pol:Bpro_0539 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane protein 316214..317614 Ralstonia pickettii 12J 6286152 YP_001897891.1 CDS Rpic_0300 NC_010682.1 318020 318280 R KEGG: rso:RSc0424 probable signal peptide protein; putative signal peptide protein complement(318020..318280) Ralstonia pickettii 12J 6287732 YP_001897892.1 CDS Rpic_0301 NC_010682.1 318305 318766 R KEGG: rso:RSc0425 hypothetical protein; hypothetical protein complement(318305..318766) Ralstonia pickettii 12J 6287733 YP_001897893.1 CDS Rpic_0302 NC_010682.1 318763 319566 R KEGG: bur:Bcep18194_A6097 hypothetical protein; hypothetical protein complement(318763..319566) Ralstonia pickettii 12J 6287734 YP_001897894.1 CDS Rpic_0303 NC_010682.1 319563 320780 R FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(319563..320780) Ralstonia pickettii 12J 6287735 YP_001897895.1 CDS Rpic_0304 NC_010682.1 320855 321718 R PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_A6095 polysaccharide deacetylase; polysaccharide deacetylase complement(320855..321718) Ralstonia pickettii 12J 6289719 YP_001897896.1 CDS Rpic_0305 NC_010682.1 321715 324147 R PFAM: MMPL domain protein; KEGG: bch:Bcen2424_2764 exporter-like protein; MMPL domain-containing protein complement(321715..324147) Ralstonia pickettii 12J 6289720 YP_001897897.1 CDS Rpic_0306 NC_010682.1 324161 324757 R KEGG: bam:Bamb_2815 hypothetical protein; hypothetical protein complement(324161..324757) Ralstonia pickettii 12J 6289721 YP_001897898.1 CDS Rpic_0307 NC_010682.1 324754 325716 R KEGG: rso:RSc0431 hypothetical protein; hypothetical protein complement(324754..325716) Ralstonia pickettii 12J 6289722 YP_001897899.1 CDS Rpic_0308 NC_010682.1 325713 327410 R PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rso:RSc0432 hypothetical protein; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ complement(325713..327410) Ralstonia pickettii 12J 6287836 YP_001897900.1 CDS Rpic_0309 NC_010682.1 327437 328111 R KEGG: rso:RSc0433 probable transmembrane protein; hypothetical protein complement(327437..328111) Ralstonia pickettii 12J 6287837 YP_001897901.1 CDS Rpic_0310 NC_010682.1 328523 328783 D Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 328523..328783 Ralstonia pickettii 12J 6287838 YP_001897902.1 CDS Rpic_0311 NC_010682.1 328838 329608 D PFAM: glycosyl transferase family 2; KEGG: rso:RSc0436 hypothetical protein; family 2 glycosyl transferase 328838..329608 Ralstonia pickettii 12J 6287839 YP_001897903.1 CDS Rpic_0313 NC_010682.1 330182 330595 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rso:RSc0437 probable transmembrane protein; hypothetical protein complement(330182..330595) Ralstonia pickettii 12J 6287381 YP_001897904.1 CDS Rpic_0314 NC_010682.1 330597 331031 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rso:RSc0438 probable transmembrane protein; hypothetical protein complement(330597..331031) Ralstonia pickettii 12J 6287382 YP_001897905.1 CDS Rpic_0315 NC_010682.1 331364 332335 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rso:RSc0439 putative lipase/esterase protein; alpha/beta hydrolase 331364..332335 Ralstonia pickettii 12J 6287383 YP_001897906.1 CDS Rpic_0316 NC_010682.1 332393 333187 D KEGG: rso:RSc0440 putative signal peptide protein; putative signal peptide protein 332393..333187 Ralstonia pickettii 12J 6288735 YP_001897907.1 CDS Rpic_0317 NC_010682.1 333207 333716 R KEGG: rso:RSc0441 probable thermoresistant gluconokinase (gluconate kinase 2) protein; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase complement(333207..333716) Ralstonia pickettii 12J 6288736 YP_001897908.1 CDS Rpic_0318 NC_010682.1 333949 335664 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RSc0442 acyl-CoA synthetase; AMP-binding domain-containing protein 333949..335664 Ralstonia pickettii 12J 6288737 YP_001897909.1 CDS Rpic_0319 NC_010682.1 336366 337640 D KEGG: rso:RSc0443 probable glycin-rich signal peptide protein; putative glycine-rich signal peptide protein 336366..337640 Ralstonia pickettii 12J 6288738 YP_001897910.1 CDS Rpic_0320 NC_010682.1 337765 338199 D KEGG: rso:RSc0444 hypothetical signal peptide protein; hypothetical protein 337765..338199 Ralstonia pickettii 12J 6287756 YP_001897911.1 CDS Rpic_0321 NC_010682.1 338216 338899 D PFAM: peptidase C39 bacteriocin processing; KEGG: rso:RSc0445 hypothetical signal peptide protein; peptidase C39 bacteriocin processing 338216..338899 Ralstonia pickettii 12J 6287757 YP_001897912.1 CDS Rpic_0322 NC_010682.1 338945 339481 D KEGG: rso:RSc0446 probable lipoprotein; putative lipoprotein 338945..339481 Ralstonia pickettii 12J 6287758 YP_001897913.1 CDS Rpic_0323 NC_010682.1 339483 340793 R KEGG: rso:RSc0447 hypothetical protein; hypothetical protein complement(339483..340793) Ralstonia pickettii 12J 6287759 YP_001897914.1 CDS queF NC_010682.1 341017 341853 R catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(341017..341853) Ralstonia pickettii 12J 6287892 YP_001897915.1 CDS Rpic_0325 NC_010682.1 341853 343373 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(341853..343373) Ralstonia pickettii 12J 6287893 YP_001897916.1 CDS Rpic_0326 NC_010682.1 343516 344433 D PFAM: Ion transport 2 domain protein ; K channel inward rectifier conserved region 2 domain protein; KEGG: rso:RSc0450 putative ATP-sensitive inward rectifier potassium channel related transmembrane protein; K channel inward rectifier domain-containing protein 343516..344433 Ralstonia pickettii 12J 6287894 YP_001897917.1 CDS Rpic_0327 NC_010682.1 344465 345712 D PFAM: nucleoside recognition domain protein; KEGG: rso:RSc0452 putative transmembrane protein; nucleoside recognition domain-containing protein 344465..345712 Ralstonia pickettii 12J 6287895 YP_001897918.1 CDS Rpic_0328 NC_010682.1 345770 346351 D KEGG: rso:RSc0453 probable transmembrane protein; hypothetical protein 345770..346351 Ralstonia pickettii 12J 6289519 YP_001897919.1 CDS Rpic_0329 NC_010682.1 346553 350590 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: rso:RSc0454 putative oxidoreductase protein; FAD linked oxidase domain-containing protein 346553..350590 Ralstonia pickettii 12J 6289520 YP_001897920.1 CDS Rpic_0330 NC_010682.1 350593 351030 D PFAM: histidine triad (HIT) protein; KEGG: rso:RSc0455 hypothetical protein; histidine triad (HIT) protein 350593..351030 Ralstonia pickettii 12J 6289521 YP_001897921.1 CDS Rpic_0331 NC_010682.1 351145 352989 D PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: rso:RSc0456 probable ATP-binding transport ABC transporter protein; ABC transporter domain-containing protein 351145..352989 Ralstonia pickettii 12J 6289522 YP_001897922.1 CDS Rpic_0332 NC_010682.1 353021 353437 D PFAM: protein of unknown function DUF971; KEGG: rso:RSc0457 hypothetical protein; hypothetical protein 353021..353437 Ralstonia pickettii 12J 6289236 YP_001897923.1 CDS ubiE NC_010682.1 353492 354223 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 353492..354223 Ralstonia pickettii 12J 6289237 YP_001897924.1 CDS Rpic_0334 NC_010682.1 354378 355397 D PFAM: import inner membrane translocase subunit Tim44; KEGG: rso:RSc0459 hypothetical protein; import inner membrane translocase subunit Tim44 354378..355397 Ralstonia pickettii 12J 6289238 YP_001897925.1 CDS Rpic_0335 NC_010682.1 355543 356205 D PFAM: Sterol-binding domain protein; KEGG: rso:RSc0460 hypothetical protein; Sterol-binding domain-containing protein 355543..356205 Ralstonia pickettii 12J 6289239 YP_001897926.1 CDS ubiB NC_010682.1 356202 357779 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 356202..357779 Ralstonia pickettii 12J 6287597 YP_001897927.1 CDS Rpic_0337 NC_010682.1 357803 358432 D PFAM: thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: rso:RSc0462 hypothetical protein; thiopurine S-methyltransferase 357803..358432 Ralstonia pickettii 12J 6287598 YP_001897928.1 CDS Rpic_0338 NC_010682.1 358663 360102 D PFAM: Na+/solute symporter; KEGG: rso:RSc0463 probable sodium/solute symporter transmembrane protein; Na+/solute symporter 358663..360102 Ralstonia pickettii 12J 6287599 YP_001897929.1 CDS Rpic_0339 NC_010682.1 360350 360691 D TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rso:RSc0464 hypothetical protein; FmdB family regulatory protein 360350..360691 Ralstonia pickettii 12J 6287600 YP_001897930.1 CDS Rpic_0340 NC_010682.1 360723 361460 D PFAM: protein of unknown function DUF502; KEGG: rso:RSc0465 probable transmembrane protein; hypothetical protein 360723..361460 Ralstonia pickettii 12J 6287073 YP_001897931.1 CDS aspS NC_010682.1 361512 363383 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 361512..363383 Ralstonia pickettii 12J 6287074 YP_001897932.1 CDS Rpic_0342 NC_010682.1 363546 364406 D KEGG: rso:RSc0467 probable transmembrane protein; hypothetical protein 363546..364406 Ralstonia pickettii 12J 6287075 YP_001897933.1 CDS ntpA NC_010682.1 364523 365008 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 364523..365008 Ralstonia pickettii 12J 6287076 YP_001897934.1 CDS Rpic_0344 NC_010682.1 365010 365756 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rso:RSc0469 hypothetical protein; endonuclease/exonuclease/phosphatase 365010..365756 Ralstonia pickettii 12J 6287979 YP_001897935.1 CDS Rpic_0345 NC_010682.1 365753 367021 D PFAM: phospholipase D/Transphosphatidylase; KEGG: rso:RSc0470 hypothetical protein; phospholipase D/Transphosphatidylase 365753..367021 Ralstonia pickettii 12J 6287980 YP_001897936.1 CDS Rpic_0346 NC_010682.1 367061 368725 D PFAM: coenzyme A transferase; KEGG: rso:RSc0471 putative transferase protein; coenzyme A transferase 367061..368725 Ralstonia pickettii 12J 6287981 YP_001897937.1 CDS Rpic_0347 NC_010682.1 369079 369720 D PFAM: regulatory protein TetR; KEGG: rso:RSc0472 putative transcription regulator protein; TetR family transcriptional regulator 369079..369720 Ralstonia pickettii 12J 6287982 YP_001897938.1 CDS Rpic_0348 NC_010682.1 369773 371560 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rso:RSc0473 putative acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 369773..371560 Ralstonia pickettii 12J 6287325 YP_001897939.1 CDS Rpic_0349 NC_010682.1 371636 374116 D PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rso:RSc0474 putative 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 371636..374116 Ralstonia pickettii 12J 6287326 YP_001897940.1 CDS Rpic_0350 NC_010682.1 374150 375349 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 374150..375349 Ralstonia pickettii 12J 6287327 YP_001897941.1 CDS Rpic_0351 NC_010682.1 375568 376533 D PFAM: DegV family protein; KEGG: reu:Reut_A0449 DegV; DegV family protein 375568..376533 Ralstonia pickettii 12J 6287328 YP_001897942.1 CDS Rpic_0352 NC_010682.1 376560 377324 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 376560..377324 Ralstonia pickettii 12J 6288908 YP_001897943.1 CDS Rpic_0353 NC_010682.1 377390 377827 R PFAM: thioesterase superfamily protein; KEGG: rso:RSc0477 hypothetical protein; thioesterase superfamily protein complement(377390..377827) Ralstonia pickettii 12J 6288909 YP_001897944.1 CDS Rpic_0354 NC_010682.1 377919 379757 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0478 probable composite ATP-binding transmembrane ABC transporter protein; ABC transporter-like protein 377919..379757 Ralstonia pickettii 12J 6288910 YP_001897945.1 CDS Rpic_0355 NC_010682.1 379773 380717 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0479 putative transcription regulator protein; LysR family transcriptional regulator 379773..380717 Ralstonia pickettii 12J 6288911 YP_001897946.1 CDS Rpic_0356 NC_010682.1 380869 382170 D PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rso:RSc0480 probable glutamate dehydrogenase (NAD(P)+) oxidoreductase protein; Glu/Leu/Phe/Val dehydrogenase 380869..382170 Ralstonia pickettii 12J 6287013 YP_001897947.1 CDS Rpic_0357 NC_010682.1 382692 383600 D PFAM: extracellular solute-binding protein family 3; KEGG: rso:RSc0481 probable amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein 382692..383600 Ralstonia pickettii 12J 6287014 YP_001897948.1 CDS Rpic_0358 NC_010682.1 383700 384428 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc0482 probable glutamate/aspartate transmembrane ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 383700..384428 Ralstonia pickettii 12J 6287015 YP_001897949.1 CDS Rpic_0359 NC_010682.1 384446 385129 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc0483 probable glutamate/aspartate transmembrane ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 384446..385129 Ralstonia pickettii 12J 6287016 YP_001897950.1 CDS Rpic_0360 NC_010682.1 385126 385860 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0484 putative glutamate/aspartate transport ATP-binding ABC transporter protein; ABC transporter-like protein 385126..385860 Ralstonia pickettii 12J 6287680 YP_001897951.1 CDS Rpic_0361 NC_010682.1 386050 386880 R PFAM: glutamine amidotransferase class-II; KEGG: rso:RSc0485 hypothetical protein; glutamine amidotransferase complement(386050..386880) Ralstonia pickettii 12J 6287681 YP_001897952.1 CDS Rpic_0362 NC_010682.1 387039 388337 D PFAM: MOFRL domain protein; KEGG: rso:RSc0486 putative hydroxypyruvate reductase oxidoreductase protein; hydroxypyruvate reductase 387039..388337 Ralstonia pickettii 12J 6287682 YP_001897953.1 CDS Rpic_0363 NC_010682.1 388371 389405 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 388371..389405 Ralstonia pickettii 12J 6287683 YP_001897954.1 CDS Rpic_0364 NC_010682.1 389410 390210 D KEGG: rso:RSc0488 putative transmembrane protein; hypothetical protein 389410..390210 Ralstonia pickettii 12J 6288759 YP_001897955.1 CDS Rpic_0365 NC_010682.1 390571 391017 R PFAM: OsmC family protein; KEGG: rso:RSc0489 hypothetical protein; OsmC family protein complement(390571..391017) Ralstonia pickettii 12J 6288761 YP_001897956.1 CDS rplM NC_010682.1 391718 392146 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 391718..392146 Ralstonia pickettii 12J 6289183 YP_001897957.1 CDS rpsI NC_010682.1 392159 392551 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 392159..392551 Ralstonia pickettii 12J 6289184 YP_001897958.1 CDS Rpic_0368 NC_010682.1 392783 393538 D KEGG: rso:RSc0492 hypothetical protein; hypothetical protein 392783..393538 Ralstonia pickettii 12J 6289185 YP_001897959.1 CDS Rpic_0369 NC_010682.1 393582 393986 D PFAM: protein of unknown function DUF583; KEGG: rso:RSc0493 hypothetical protein; hypothetical protein 393582..393986 Ralstonia pickettii 12J 6289186 YP_001897960.1 CDS Rpic_0370 NC_010682.1 394113 394487 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 394113..394487 Ralstonia pickettii 12J 6287848 YP_001897961.1 CDS anmK NC_010682.1 394554 395708 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(394554..395708) Ralstonia pickettii 12J 6287849 YP_001897962.1 CDS Rpic_0372 NC_010682.1 395884 397149 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 395884..397149 Ralstonia pickettii 12J 6287850 YP_001897963.1 CDS Rpic_0373 NC_010682.1 397146 397658 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 397146..397658 Ralstonia pickettii 12J 6287851 YP_001897964.1 CDS Rpic_0374 NC_010682.1 397678 398358 D PFAM: Phosphoglycerate mutase; KEGG: rso:RSc0499 putative phosphoglycerate mutase 2 protein; phosphoglycerate mutase 397678..398358 Ralstonia pickettii 12J 6289420 YP_001897965.1 CDS Rpic_0375 NC_010682.1 398355 399071 R TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: reh:H16_A0494 hypothetical protein; hypothetical protein complement(398355..399071) Ralstonia pickettii 12J 6289421 YP_001897966.1 CDS ruvB NC_010682.1 399089 400162 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(399089..400162) Ralstonia pickettii 12J 6289422 YP_001897967.1 CDS ruvA NC_010682.1 400226 400807 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(400226..400807) Ralstonia pickettii 12J 6289423 YP_001897968.1 CDS Rpic_0378 NC_010682.1 400908 402047 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rso:RSc0502 putative glycerophosphoryl diester phosphodiesterase, periplasmic precursor protein; glycerophosphoryl diester phosphodiesterase complement(400908..402047) Ralstonia pickettii 12J 6289675 YP_001897969.1 CDS ruvC NC_010682.1 402126 402671 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(402126..402671) Ralstonia pickettii 12J 6289676 YP_001897970.1 CDS purH NC_010682.1 402754 404328 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(402754..404328) Ralstonia pickettii 12J 6289677 YP_001897971.1 CDS Rpic_0381 NC_010682.1 404425 404658 R PFAM: helix-turn-helix Fis-type; KEGG: rso:RSc0505 DNA-binding protein fis; DNA-binding protein Fis complement(404425..404658) Ralstonia pickettii 12J 6289678 YP_001897972.1 CDS Rpic_0382 NC_010682.1 404655 405722 R TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: rso:RSc0506 probable NifR3-like protein; nifR3 family TIM-barrel protein complement(404655..405722) Ralstonia pickettii 12J 6288813 YP_001897973.1 CDS Rpic_0383 NC_010682.1 405918 407201 R PFAM: FAD dependent oxidoreductase; KEGG: rso:RSc0507 probable amino acid dehydrogenase transmembrane protein; FAD dependent oxidoreductase complement(405918..407201) Ralstonia pickettii 12J 6288814 YP_001897974.1 CDS Rpic_0384 NC_010682.1 407205 408440 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: monooxygenase FAD-binding; KEGG: rso:RSc0508 hypothetical protein; hypothetical protein complement(407205..408440) Ralstonia pickettii 12J 6288815 YP_001897975.1 CDS Rpic_0385 NC_010682.1 408437 409816 R PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: rso:RSc0509 probable Xaa-Pro aminopeptidase (aminopeptidase P II) protein; peptidase M24 complement(408437..409816) Ralstonia pickettii 12J 6288816 YP_001897976.1 CDS Rpic_0386 NC_010682.1 410043 412100 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: rso:RSc0510 probable transmembrane protein; diguanylate cyclase/phosphodiesterase 410043..412100 Ralstonia pickettii 12J 6289377 YP_001897977.1 CDS Rpic_0387 NC_010682.1 412105 412797 R PFAM: Nucleotidyl transferase; KEGG: rso:RSc0511 putative mannose-1-phosphate guanyltransferase-related protein; nucleotidyl transferase complement(412105..412797) Ralstonia pickettii 12J 6289378 YP_001897978.1 CDS Rpic_0388 NC_010682.1 412815 413141 R PFAM: branched-chain amino acid transport; KEGG: rso:RSc0512 probable transmembrane protein; branched-chain amino acid transport complement(412815..413141) Ralstonia pickettii 12J 6289379 YP_001897979.1 CDS Rpic_0389 NC_010682.1 413138 413866 R PFAM: AzlC family protein; KEGG: rso:RSc0513 hypothetical protein; AzlC family protein complement(413138..413866) Ralstonia pickettii 12J 6289380 YP_001897980.1 CDS Rpic_0390 NC_010682.1 413866 414939 R PFAM: aminoglycoside phosphotransferase; KEGG: rso:RSc0514 hypothetical protein; aminoglycoside phosphotransferase complement(413866..414939) Ralstonia pickettii 12J 6287780 YP_001897981.1 CDS Rpic_0391 NC_010682.1 415116 417557 D PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: rso:RSc0515 probable organic solvent tolerance transmembrane protein; organic solvent tolerance protein 415116..417557 Ralstonia pickettii 12J 6287781 YP_001897982.1 CDS Rpic_0392 NC_010682.1 417550 419052 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: rso:RSc0516 probable peptidyl-prolyl cis-trans isomerase (rotamase C) protein; SurA domain 417550..419052 Ralstonia pickettii 12J 6287782 YP_001897983.1 CDS pdxA NC_010682.1 419141 420157 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 419141..420157 Ralstonia pickettii 12J 6287783 YP_001897984.1 CDS ksgA NC_010682.1 420190 421035 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 420190..421035 Ralstonia pickettii 12J 6287804 YP_001897985.1 CDS Rpic_0395 NC_010682.1 421022 421927 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0519 hypothetical protein; hypothetical protein complement(421022..421927) Ralstonia pickettii 12J 6287805 YP_001897986.1 CDS Rpic_0396 NC_010682.1 421911 422318 R KEGG: rso:RSc0520 probable lactoylglutathione lyase (methylglyoxalase) protein; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase complement(421911..422318) Ralstonia pickettii 12J 6287806 YP_001897987.1 CDS Rpic_0397 NC_010682.1 422438 423316 R PFAM: protein of unknown function DUF45; KEGG: rso:RSc0521 hypothetical protein; hypothetical protein complement(422438..423316) Ralstonia pickettii 12J 6287807 YP_001897988.1 CDS Rpic_0398 NC_010682.1 423313 424065 R PFAM: phospholipid/glycerol acyltransferase; KEGG: rso:RSc0522 putative acyltransferase transmembrane protein; phospholipid/glycerol acyltransferase complement(423313..424065) Ralstonia pickettii 12J 6288501 YP_001897989.1 CDS Rpic_0399 NC_010682.1 424077 424655 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(424077..424655) Ralstonia pickettii 12J 6288502 YP_001897990.1 CDS glyS NC_010682.1 424687 426780 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(424687..426780) Ralstonia pickettii 12J 6288503 YP_001897991.1 CDS Rpic_0401 NC_010682.1 426867 427526 R KEGG: rso:RSc0525 hypothetical signal peptide protein; hypothetical protein complement(426867..427526) Ralstonia pickettii 12J 6288504 YP_001897992.1 CDS glyQ NC_010682.1 427523 428509 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(427523..428509) Ralstonia pickettii 12J 6287688 YP_001897993.1 CDS lnt NC_010682.1 428685 430196 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(428685..430196) Ralstonia pickettii 12J 6287689 YP_001897994.1 CDS Rpic_0404 NC_010682.1 430261 431190 R PFAM: CBS domain containing protein; transporter-associated region; KEGG: rso:RSc0528 hypothetical protein; hypothetical protein complement(430261..431190) Ralstonia pickettii 12J 6287690 YP_001897995.1 CDS Rpic_0405 NC_010682.1 431317 432531 R KEGG: pfa:PFD1175w Plasmodium falciparum trophozoite antigen r45-like protein; hypothetical protein complement(431317..432531) Ralstonia pickettii 12J 6287691 YP_001897996.1 CDS Rpic_0406 NC_010682.1 432904 433716 R contains unknown N-terminal domain/putative metalloprotease C-terminal domain; hypothetical protein complement(432904..433716) Ralstonia pickettii 12J 6289652 YP_001897997.1 CDS Rpic_0407 NC_010682.1 433729 434721 R PFAM: PhoH family protein; KEGG: reh:H16_A0527 phosphate starvation-inducible protein PhoH,predicted ATPase; PhoH family protein complement(433729..434721) Ralstonia pickettii 12J 6289653 YP_001897998.1 CDS Rpic_0408 NC_010682.1 434743 436113 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(434743..436113) Ralstonia pickettii 12J 6289654 YP_001897999.1 CDS Rpic_0409 NC_010682.1 436166 436579 R KEGG: rso:RSc0532 hypothetical protein; hypothetical protein complement(436166..436579) Ralstonia pickettii 12J 6289655 YP_001898000.1 CDS Rpic_0410 NC_010682.1 436670 437668 R KEGG: rso:RSc0533 putative transmembrane protein; hypothetical protein complement(436670..437668) Ralstonia pickettii 12J 6289711 YP_001898001.1 CDS Rpic_0411 NC_010682.1 437812 438738 R PFAM: OmpW family protein; KEGG: bmn:BMA10247_3516 outer membrane protein, OmpW family; OmpW family protein complement(437812..438738) Ralstonia pickettii 12J 6289712 YP_001898002.1 CDS Rpic_0412 NC_010682.1 438950 439867 R KEGG: rso:RSc0534 probable lipoprotein transmembrane; putative transmembrane lipoprotein complement(438950..439867) Ralstonia pickettii 12J 6289713 YP_001898003.1 CDS Rpic_0413 NC_010682.1 439888 441627 R PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A2778 putative long chain fatty-acid CoA ligase(long-chain acyl-CoA synthetase); AMP-dependent synthetase and ligase complement(439888..441627) Ralstonia pickettii 12J 6289714 YP_001898004.1 CDS Rpic_0414 NC_010682.1 441729 443048 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(441729..443048) Ralstonia pickettii 12J 6289250 YP_001898005.1 CDS Rpic_0415 NC_010682.1 443053 443973 R PFAM: MaoC domain protein dehydratase; KEGG: pfl:PFL_2941 MaoC-like domain protein; MaoC domain-containing protein dehydratase complement(443053..443973) Ralstonia pickettii 12J 6289251 YP_001898006.1 CDS fabG NC_010682.1 443981 445393 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(443981..445393) Ralstonia pickettii 12J 6289252 YP_001898007.1 CDS fadE NC_010682.1 445428 447938 R functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase complement(445428..447938) Ralstonia pickettii 12J 6289253 YP_001898008.1 CDS Rpic_0418 NC_010682.1 448066 449124 R PFAM: regulatory protein TetR; KEGG: rso:RSc0538 putative transcription regulator protein; TetR family transcriptional regulator complement(448066..449124) Ralstonia pickettii 12J 6289778 YP_001898009.1 CDS Rpic_0420 NC_010682.1 449858 451540 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rso:RSc0539 probable ATP-dependent RNA helicase protein; DEAD/DEAH box helicase 449858..451540 Ralstonia pickettii 12J 6289780 YP_001898010.1 CDS Rpic_0421 NC_010682.1 451546 452580 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 451546..452580 Ralstonia pickettii 12J 6289781 YP_001898011.1 CDS Rpic_0422 NC_010682.1 452614 453510 R PFAM: Pirin domain protein; KEGG: rso:RSc0541 probable pirin-like protein; Pirin domain-containing protein complement(452614..453510) Ralstonia pickettii 12J 6287221 YP_001898012.1 CDS Rpic_0423 NC_010682.1 453659 454576 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0542 probable transcription regulator protein; LysR family transcriptional regulator 453659..454576 Ralstonia pickettii 12J 6287222 YP_001898013.1 CDS Rpic_0424 NC_010682.1 455034 455774 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc0543 probable response regulator transcription regulator protein; winged helix family two component transcriptional regulator 455034..455774 Ralstonia pickettii 12J 6287223 YP_001898014.1 CDS Rpic_0425 NC_010682.1 455854 456186 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: spe:Spro_2546 cupin 2 conserved barrel domain protein; cupin 455854..456186 Ralstonia pickettii 12J 6287224 YP_001898015.1 CDS Rpic_0426 NC_010682.1 456170 456745 R KEGG: rso:RSc0544 hypothetical protein; hypothetical protein complement(456170..456745) Ralstonia pickettii 12J 6287908 YP_001898016.1 CDS Rpic_0427 NC_010682.1 456765 457973 R PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rso:RSc0545 probable oxidoreductase protein; FAD-binding monooxygenase complement(456765..457973) Ralstonia pickettii 12J 6287909 YP_001898017.1 CDS Rpic_0428 NC_010682.1 458095 459018 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7601 transcriptional regulator, LysR family; LysR family transcriptional regulator 458095..459018 Ralstonia pickettii 12J 6287910 YP_001898018.1 CDS Rpic_0431 NC_010682.1 460523 461509 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bur:Bcep18194_C7599 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase 460523..461509 Ralstonia pickettii 12J 6289770 YP_001898019.1 CDS Rpic_0432 NC_010682.1 461506 462174 R PFAM: regulatory protein TetR; KEGG: bpd:BURPS668_A2819 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(461506..462174) Ralstonia pickettii 12J 6289771 YP_001898020.1 CDS Rpic_0433 NC_010682.1 462283 463833 D PFAM: FAD dependent oxidoreductase; KEGG: bpd:BURPS668_A2821 arylesterase/monoxygenase; FAD dependent oxidoreductase 462283..463833 Ralstonia pickettii 12J 6289772 YP_001898021.1 CDS Rpic_0434 NC_010682.1 463857 464813 D PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_II0402 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein 463857..464813 Ralstonia pickettii 12J 6289773 YP_001898022.1 CDS Rpic_0435 NC_010682.1 465221 465349 R hypothetical protein complement(465221..465349) Ralstonia pickettii 12J 6288489 YP_001898023.1 CDS Rpic_0436 NC_010682.1 465455 465844 D KEGG: rme:Rmet_4407 hypothetical protein; hypothetical protein 465455..465844 Ralstonia pickettii 12J 6288490 YP_001898024.1 CDS Rpic_0437 NC_010682.1 466461 466955 D KEGG: rpb:RPB_1591 hypothetical protein; McrBC 5-methylcytosine restriction system component-like protein 466461..466955 Ralstonia pickettii 12J 6288491 YP_001898025.1 CDS Rpic_0438 NC_010682.1 467686 469287 R KEGG: rru:Rru_A3316 phage integrase; phage integrase complement(467686..469287) Ralstonia pickettii 12J 6288492 YP_001898026.1 CDS Rpic_0439 NC_010682.1 469794 470816 D KEGG: bxe:Bxe_B2633 ATPase; ATPase 469794..470816 Ralstonia pickettii 12J 6287321 YP_001898027.1 CDS Rpic_0440 NC_010682.1 470844 471803 D KEGG: mac:MA3443 hypothetical protein; hypothetical protein 470844..471803 Ralstonia pickettii 12J 6287322 YP_001898028.1 CDS Rpic_0441 NC_010682.1 471980 472939 D PFAM: plasmid replicase; Primase 1; KEGG: bxe:Bxe_A3944 putative replicase; plasmid replicase 471980..472939 Ralstonia pickettii 12J 6287323 YP_001898029.1 CDS Rpic_0442 NC_010682.1 473259 473684 R hypothetical protein complement(473259..473684) Ralstonia pickettii 12J 6287324 YP_001898030.1 CDS Rpic_0443 NC_010682.1 473700 474980 R PFAM: MT-A70 family protein; SMART: ParB domain protein nuclease; KEGG: smd:Smed_1667 MT-A70 family protein; MT-A70 family protein complement(473700..474980) Ralstonia pickettii 12J 6288473 YP_001898031.1 CDS Rpic_0444 NC_010682.1 474996 475394 R hypothetical protein complement(474996..475394) Ralstonia pickettii 12J 6288474 YP_001898032.1 CDS Rpic_0445 NC_010682.1 475533 476390 D hypothetical protein 475533..476390 Ralstonia pickettii 12J 6288475 YP_001898033.1 CDS Rpic_0446 NC_010682.1 476387 477463 R hypothetical protein complement(476387..477463) Ralstonia pickettii 12J 6288476 YP_001898034.1 CDS Rpic_0447 NC_010682.1 477646 480615 D KEGG: mfa:Mfla_1215 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease 477646..480615 Ralstonia pickettii 12J 6287613 YP_001898035.1 CDS Rpic_0448 NC_010682.1 480605 481912 D PFAM: restriction modification system DNA specificity domain; KEGG: mfa:Mfla_1216 restriction modification system DNA specificity domain; restriction modification system DNA specificity domain-containing protein 480605..481912 Ralstonia pickettii 12J 6287614 YP_001898036.1 CDS Rpic_0449 NC_010682.1 481909 483009 D anticodon nuclease 481909..483009 Ralstonia pickettii 12J 6287615 YP_001898037.1 CDS Rpic_0450 NC_010682.1 483006 484619 D TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: mfa:Mfla_1220 type I restriction-modification system, M subunit; type I restriction-modification system, M subunit 483006..484619 Ralstonia pickettii 12J 6287616 YP_001898038.1 CDS Rpic_0451 NC_010682.1 484957 485367 D hypothetical protein 484957..485367 Ralstonia pickettii 12J 6288916 YP_001898039.1 CDS Rpic_0452 NC_010682.1 485364 486737 D PFAM: Relaxase/mobilization nuclease family protein; KEGG: bxe:Bxe_A3938 hypothetical protein; Relaxase/mobilization nuclease family protein 485364..486737 Ralstonia pickettii 12J 6288917 YP_001898040.1 CDS Rpic_0453 NC_010682.1 486839 487147 D hypothetical protein 486839..487147 Ralstonia pickettii 12J 6288918 YP_001898041.1 CDS Rpic_0454 NC_010682.1 487120 488115 R hypothetical protein complement(487120..488115) Ralstonia pickettii 12J 6288919 YP_001898042.1 CDS Rpic_0455 NC_010682.1 488148 489248 R hypothetical protein complement(488148..489248) Ralstonia pickettii 12J 6288218 YP_001898043.1 CDS Rpic_0456 NC_010682.1 489269 489790 R hypothetical protein complement(489269..489790) Ralstonia pickettii 12J 6288219 YP_001898044.1 CDS Rpic_0457 NC_010682.1 489855 490532 R KEGG: ajs:Ajs_3592 hypothetical protein; hypothetical protein complement(489855..490532) Ralstonia pickettii 12J 6288220 YP_001898045.1 CDS Rpic_0458 NC_010682.1 490598 491809 R KEGG: bmu:Bmul_4115 outer membrane autotransporter barrel domain protein; hypothetical protein complement(490598..491809) Ralstonia pickettii 12J 6288221 YP_001898046.1 CDS Rpic_0459 NC_010682.1 491925 492170 D PFAM: helix-turn-helix domain protein; KEGG: ppg:PputGB1_4174 transcriptional regulator, XRE family; XRE family transcriptional regulator 491925..492170 Ralstonia pickettii 12J 6287081 YP_001898047.1 CDS Rpic_0460 NC_010682.1 492274 493035 R PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: nmu:Nmul_A2417 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(492274..493035) Ralstonia pickettii 12J 6287082 YP_001898048.1 CDS Rpic_0461 NC_010682.1 493040 493639 R hypothetical protein complement(493040..493639) Ralstonia pickettii 12J 6287083 YP_001898049.1 CDS Rpic_0462 NC_010682.1 493734 495053 R PFAM: integrase family protein; KEGG: bmu:Bmul_0646 integrase family protein; integrase family protein complement(493734..495053) Ralstonia pickettii 12J 6287084 YP_001898050.1 CDS Rpic_0463 NC_010682.1 495263 496966 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSc0547 putative sugar transporter transmembrane protein; major facilitator superfamily protein complement(495263..496966) Ralstonia pickettii 12J 6288976 YP_001898051.1 CDS Rpic_0464 NC_010682.1 497479 497787 D PFAM: protein of unknown function DUF485; KEGG: bur:Bcep18194_B1981 protein of unknown function DUF485; hypothetical protein 497479..497787 Ralstonia pickettii 12J 6288977 YP_001898052.1 CDS Rpic_0465 NC_010682.1 497784 499514 D TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_B1980 Na+/solute symporter; sodium solute transporter superfamily protein 497784..499514 Ralstonia pickettii 12J 6287037 YP_001898053.1 CDS Rpic_0466 NC_010682.1 499579 501405 D PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: pna:Pnap_0480 cyclic nucleotide-binding protein; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase 499579..501405 Ralstonia pickettii 12J 6287038 YP_001898054.1 CDS Rpic_0467 NC_010682.1 501422 502072 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 501422..502072 Ralstonia pickettii 12J 6287039 YP_001898055.1 CDS Rpic_0468 NC_010682.1 502081 502395 R KEGG: rso:RSc0548 hypothetical protein; hypothetical protein complement(502081..502395) Ralstonia pickettii 12J 6287040 YP_001898056.1 CDS Rpic_0469 NC_010682.1 502392 503987 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: rso:RSc0549 probable transmembrane sensor histidine kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase complement(502392..503987) Ralstonia pickettii 12J 6288766 YP_001898057.1 CDS Rpic_0470 NC_010682.1 503980 504690 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc0550 probable response regulator transcription regulator protein; winged helix family two component transcriptional regulator complement(503980..504690) Ralstonia pickettii 12J 6288767 YP_001898058.1 CDS recA NC_010682.1 504956 506014 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 504956..506014 Ralstonia pickettii 12J 6288768 YP_001898059.1 CDS recX NC_010682.1 506125 506604 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 506125..506604 Ralstonia pickettii 12J 6288769 YP_001898060.1 CDS Rpic_0473 NC_010682.1 506891 507517 D KEGG: rso:RSc0553 hypothetical protein; hypothetical protein 506891..507517 Ralstonia pickettii 12J 6288967 YP_001898061.1 CDS sucC NC_010682.1 507584 508750 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 507584..508750 Ralstonia pickettii 12J 6288968 YP_001898062.1 CDS Rpic_0475 NC_010682.1 508839 509720 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 508839..509720 Ralstonia pickettii 12J 6288969 YP_001898063.1 CDS Rpic_0476 NC_010682.1 509874 510569 D PFAM: Integral membrane protein TerC; KEGG: rso:RSc0556 hypothetical protein; integral membrane protein TerC 509874..510569 Ralstonia pickettii 12J 6288970 YP_001898064.1 CDS Rpic_0477 NC_010682.1 510755 511276 D KEGG: rso:RSc0557 probable type 4 fimbrial pilin signal peptide protein; putative type 4 fimbrial pilin signal peptide protein 510755..511276 Ralstonia pickettii 12J 6288437 YP_001898065.1 CDS Rpic_0478 NC_010682.1 511529 512038 D KEGG: rso:RSc0558 type 4 fimbrial pilin signal peptide protein; type 4 fimbrial pilin signal peptide protein 511529..512038 Ralstonia pickettii 12J 6288438 YP_001898066.1 CDS Rpic_0479 NC_010682.1 512110 513846 D PFAM: O-antigen polymerase; KEGG: rso:RSc0559 hypothetical protein; O-antigen polymerase 512110..513846 Ralstonia pickettii 12J 6288439 YP_001898067.1 CDS Rpic_0480 NC_010682.1 514033 514557 D KEGG: bte:BTH_I0649 pilin (bacterial filament) subfamily; pilin subfamily protein 514033..514557 Ralstonia pickettii 12J 6288440 YP_001898068.1 CDS moaC NC_010682.1 514604 515080 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(514604..515080) Ralstonia pickettii 12J 6289116 YP_001898069.1 CDS Rpic_0482 NC_010682.1 515186 516895 D PFAM: peptidase M48 Ste24p; Tetratricopeptide TPR_2 repeat protein; KEGG: rso:RSc0561 hypothetical signal peptide protein; peptidase M48 Ste24p 515186..516895 Ralstonia pickettii 12J 6289117 YP_001898070.1 CDS Rpic_0483 NC_010682.1 516916 517497 R KEGG: rso:RSc0562 hypothetical protein; hypothetical protein complement(516916..517497) Ralstonia pickettii 12J 6289118 YP_001898071.1 CDS Rpic_0484 NC_010682.1 517490 518566 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc0563 hypothetical protein; alpha/beta hydrolase fold protein complement(517490..518566) Ralstonia pickettii 12J 6289119 YP_001898072.1 CDS Rpic_0485 NC_010682.1 518601 519041 R KEGG: rso:RSc0564 hypothetical protein; hypothetical protein complement(518601..519041) Ralstonia pickettii 12J 6288154 YP_001898073.1 CDS Rpic_0486 NC_010682.1 519067 520092 R TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: rso:RSc0565 probable ADP-heptose--lipopolysaccharide heptosyltransferase II protein; lipopolysaccharide heptosyltransferase II complement(519067..520092) Ralstonia pickettii 12J 6288155 YP_001898074.1 CDS Rpic_0487 NC_010682.1 520142 520339 R KEGG: rso:RSc0566 hypothetical protein; hypothetical protein complement(520142..520339) Ralstonia pickettii 12J 6288156 YP_001898075.1 CDS Rpic_0488 NC_010682.1 520667 521461 D PFAM: AzlC family protein; KEGG: rso:RSc0568 hypothetical protein; AzlC family protein 520667..521461 Ralstonia pickettii 12J 6288157 YP_001898076.1 CDS Rpic_0489 NC_010682.1 521458 521781 D PFAM: branched-chain amino acid transport; KEGG: rso:RSc0569 probable transmembrane protein; branched-chain amino acid transport 521458..521781 Ralstonia pickettii 12J 6288366 YP_001898077.1 CDS Rpic_0490 NC_010682.1 521784 522680 D TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0570 hypothetical protein; RarD protein, DMT superfamily transporter 521784..522680 Ralstonia pickettii 12J 6288367 YP_001898078.1 CDS pgk NC_010682.1 522800 524011 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 522800..524011 Ralstonia pickettii 12J 6288368 YP_001898079.1 CDS Rpic_0492 NC_010682.1 524061 525500 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 524061..525500 Ralstonia pickettii 12J 6288369 YP_001898080.1 CDS Rpic_0493 NC_010682.1 525588 526652 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 525588..526652 Ralstonia pickettii 12J 6288864 YP_001898081.1 CDS Rpic_0494 NC_010682.1 526789 527712 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 526789..527712 Ralstonia pickettii 12J 6288865 YP_001898082.1 CDS Rpic_0495 NC_010682.1 527728 528237 D KEGG: rso:RSc0575 probable phosphoribosylaminoimidazole carboxylase catalytic subunit protein; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 527728..528237 Ralstonia pickettii 12J 6288866 YP_001898083.1 CDS Rpic_0496 NC_010682.1 528257 529492 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase 528257..529492 Ralstonia pickettii 12J 6288867 YP_001898084.1 CDS Rpic_0497 NC_010682.1 529506 530519 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: rso:RSc0577 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 529506..530519 Ralstonia pickettii 12J 6289120 YP_001898085.1 CDS Rpic_0498 NC_010682.1 530665 531708 D PFAM: lipolytic protein G-D-S-L family; KEGG: rso:RSc0580 putative lipase / esterase protein; G-D-S-L family lipolytic protein 530665..531708 Ralstonia pickettii 12J 6289121 YP_001898086.1 CDS Rpic_0499 NC_010682.1 531983 532510 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: rso:RSc0583 probable molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B complement(531983..532510) Ralstonia pickettii 12J 6289122 YP_001898087.1 CDS Rpic_0500 NC_010682.1 532507 534045 R KEGG: rso:RSc0584 probable D-alanyl-D-alanine carboxypeptidase signal peptide protein; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(532507..534045) Ralstonia pickettii 12J 6289123 YP_001898088.1 CDS Rpic_0501 NC_010682.1 534186 536777 R TIGRFAM: DNA ligase D; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: psb:Psyr_3245 ATP-dependent DNA ligase; DNA ligase D complement(534186..536777) Ralstonia pickettii 12J 6288888 YP_001898089.1 CDS Rpic_0502 NC_010682.1 536796 537710 R TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bxe:Bxe_A2329 putative membrane protein, Ku-domain; Ku protein complement(536796..537710) Ralstonia pickettii 12J 6288889 YP_001898090.1 CDS Rpic_0503 NC_010682.1 537939 539048 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc0585 putative transport transmembrane protein; major facilitator superfamily protein 537939..539048 Ralstonia pickettii 12J 6288890 YP_001898091.1 CDS Rpic_0504 NC_010682.1 539256 539645 D KEGG: rso:RSc0586 hypothetical protein; hypothetical protein 539256..539645 Ralstonia pickettii 12J 6288891 YP_001898092.1 CDS Rpic_0505 NC_010682.1 539650 540480 D KEGG: rso:RSc0587 hypothetical protein; hypothetical protein 539650..540480 Ralstonia pickettii 12J 6289112 YP_001898093.1 CDS Rpic_0506 NC_010682.1 540470 541258 R PFAM: protein of unknown function DUF1045; KEGG: reh:H16_B1290 hypothetical protein; hypothetical protein complement(540470..541258) Ralstonia pickettii 12J 6289113 YP_001898094.1 CDS Rpic_0507 NC_010682.1 541267 542442 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: reu:Reut_B4184 amidohydrolase:Amidohydrolase-like; amidohydrolase complement(541267..542442) Ralstonia pickettii 12J 6289114 YP_001898095.1 CDS Rpic_0508 NC_010682.1 542583 545336 D KEGG: rso:RSc0588 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 542583..545336 Ralstonia pickettii 12J 6289115 YP_001898096.1 CDS Rpic_0509 NC_010682.1 545486 546898 D PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_A1954 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 545486..546898 Ralstonia pickettii 12J 6287792 YP_001898097.1 CDS Rpic_0510 NC_010682.1 547462 548784 R PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_1926 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(547462..548784) Ralstonia pickettii 12J 6287793 YP_001898098.1 CDS Rpic_0511 NC_010682.1 548953 550311 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(548953..550311) Ralstonia pickettii 12J 6287794 YP_001898099.1 CDS Rpic_0512 NC_010682.1 550339 551016 R KEGG: rme:Rmet_1928 hypothetical protein; hypothetical protein complement(550339..551016) Ralstonia pickettii 12J 6287795 YP_001898100.1 CDS Rpic_0513 NC_010682.1 551062 551778 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rme:Rmet_1929 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(551062..551778) Ralstonia pickettii 12J 6287249 YP_001898101.1 CDS Rpic_0514 NC_010682.1 551954 553219 D PFAM: monooxygenase FAD-binding; KEGG: reh:H16_A0578 2-polyprenyl-6-methoxyphenol hydroxylase or related FAD-dependent oxidoreductase; hypothetical protein 551954..553219 Ralstonia pickettii 12J 6287250 YP_001898102.1 CDS Rpic_0515 NC_010682.1 553265 554398 D PFAM: Extracellular ligand-binding receptor; KEGG: reh:H16_A0577 ABC-type transporter, periplasmic component: HAAT family; extracellular ligand-binding receptor 553265..554398 Ralstonia pickettii 12J 6287251 YP_001898103.1 CDS Rpic_0516 NC_010682.1 554472 554987 D PFAM: regulatory protein MarR; KEGG: rso:RSc0590 putative transcription regulator protein; MarR family transcriptional regulator 554472..554987 Ralstonia pickettii 12J 6287252 YP_001898104.1 CDS Rpic_0517 NC_010682.1 555070 555411 R KEGG: rso:RSc0591 hypothetical protein; hypothetical protein complement(555070..555411) Ralstonia pickettii 12J 6287700 YP_001898105.1 CDS Rpic_0518 NC_010682.1 555755 556975 D KEGG: rso:RSc0592 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 555755..556975 Ralstonia pickettii 12J 6287701 YP_001898106.1 CDS Rpic_0519 NC_010682.1 556993 557154 R KEGG: ani:AN0757.2 hypothetical protein; hypothetical protein complement(556993..557154) Ralstonia pickettii 12J 6287702 YP_001898107.1 CDS Rpic_0520 NC_010682.1 557384 558370 D KEGG: rso:RSc0593 hypothetical protein; hypothetical protein 557384..558370 Ralstonia pickettii 12J 6287703 YP_001898108.1 CDS Rpic_0521 NC_010682.1 558476 558892 D KEGG: rso:RSc0594 hypothetical protein; hypothetical protein 558476..558892 Ralstonia pickettii 12J 6286657 YP_001898109.1 CDS Rpic_0522 NC_010682.1 558979 561162 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RSc0595 putative outer membrane receptor signal peptide protein; TonB-dependent receptor 558979..561162 Ralstonia pickettii 12J 6286658 YP_001898110.1 CDS Rpic_0523 NC_010682.1 561217 561849 R KEGG: bja:bll7411 hypothetical protein; hypothetical protein complement(561217..561849) Ralstonia pickettii 12J 6286659 YP_001898111.1 CDS Rpic_0524 NC_010682.1 561985 562572 R KEGG: bcn:Bcen_1390 hypothetical protein; hypothetical protein complement(561985..562572) Ralstonia pickettii 12J 6286660 YP_001898112.1 CDS Rpic_0525 NC_010682.1 562744 563025 D KEGG: rso:RSc0596 hypothetical protein; hypothetical protein 562744..563025 Ralstonia pickettii 12J 6288639 YP_001898113.1 CDS Rpic_0526 NC_010682.1 563022 563222 D KEGG: rso:RSc0597 hypothetical protein; hypothetical protein 563022..563222 Ralstonia pickettii 12J 6288640 YP_001898114.1 CDS Rpic_0527 NC_010682.1 563241 563579 R KEGG: rso:RSc0598 hypothetical protein; hypothetical protein complement(563241..563579) Ralstonia pickettii 12J 6288641 YP_001898115.1 CDS Rpic_0528 NC_010682.1 563794 565257 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rso:RSc0599 putative transcription regulator protein; GntR family transcriptional regulator 563794..565257 Ralstonia pickettii 12J 6288642 YP_001898116.1 CDS Rpic_0529 NC_010682.1 565267 565935 R KEGG: rso:RSc0600 hypothetical protein; hypothetical protein complement(565267..565935) Ralstonia pickettii 12J 6289600 YP_001898117.1 CDS Rpic_0530 NC_010682.1 565932 567575 R PFAM: Mammalian cell entry related domain protein; KEGG: rso:RSc0601 probable transmembrane protein; mammalian cell entry domain-containing protein complement(565932..567575) Ralstonia pickettii 12J 6289601 YP_001898118.1 CDS Rpic_0531 NC_010682.1 567572 568309 R PFAM: Paraquat-inducible protein A; KEGG: rso:RSc0602 hypothetical protein; Paraquat-inducible protein A complement(567572..568309) Ralstonia pickettii 12J 6289602 YP_001898119.1 CDS Rpic_0532 NC_010682.1 568306 569085 R PFAM: Paraquat-inducible protein A; KEGG: rso:RSc0603 probable transmembrane protein; Paraquat-inducible protein A complement(568306..569085) Ralstonia pickettii 12J 6289603 YP_001898120.1 CDS Rpic_0533 NC_010682.1 569323 569814 D KEGG: dre:794124 hypothetical protein LOC794124; hypothetical protein 569323..569814 Ralstonia pickettii 12J 6287041 YP_001898121.1 CDS Rpic_0534 NC_010682.1 569833 570696 R KEGG: rso:RSc0604 probable hydrolase oxidoreductase protein; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase complement(569833..570696) Ralstonia pickettii 12J 6287042 YP_001898122.1 CDS Rpic_0535 NC_010682.1 570719 571825 R TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rso:RSp0069 probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase protein; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(570719..571825) Ralstonia pickettii 12J 6287043 YP_001898123.1 CDS Rpic_0536 NC_010682.1 572030 573859 D PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: rso:RSc0606 putative methyl-accepting chemotaxis transmembrane protein; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 572030..573859 Ralstonia pickettii 12J 6287044 YP_001898124.1 CDS Rpic_0537 NC_010682.1 573887 574555 R PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_5220 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein complement(573887..574555) Ralstonia pickettii 12J 6288537 YP_001898125.1 CDS Rpic_0538 NC_010682.1 574809 576566 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bxe:Bxe_B2626 periplasmic sensor diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(574809..576566) Ralstonia pickettii 12J 6288538 YP_001898126.1 CDS Rpic_0539 NC_010682.1 576906 577187 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bam:Bamb_6274 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(576906..577187) Ralstonia pickettii 12J 6288539 YP_001898127.1 CDS Rpic_0540 NC_010682.1 577449 578498 D PFAM: protein of unknown function UPF0118; KEGG: bch:Bcen2424_3807 protein of unknown function UPF0118; hypothetical protein 577449..578498 Ralstonia pickettii 12J 6288540 YP_001898128.1 CDS Rpic_0541 NC_010682.1 578529 579773 R PFAM: Saccharopine dehydrogenase; KEGG: bur:Bcep18194_C7476 putative saccharopine dehydrogenase; saccharopine dehydrogenase complement(578529..579773) Ralstonia pickettii 12J 6289699 YP_001898129.1 CDS Rpic_0542 NC_010682.1 580184 581770 D Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 580184..581770 Ralstonia pickettii 12J 6289700 YP_001898130.1 CDS Rpic_0543 NC_010682.1 582045 583340 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6665 metabolite/H+ symporter, major facilitator superfamily (MFS); major facilitator superfamily metabolite/H+ symporter 582045..583340 Ralstonia pickettii 12J 6289701 YP_001898131.1 CDS Rpic_0544 NC_010682.1 583397 584179 D PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_6664 extracellular solute-binding protein, family 1; family 1 extracellular solute-binding protein 583397..584179 Ralstonia pickettii 12J 6289702 YP_001898132.1 CDS Rpic_0545 NC_010682.1 584216 585133 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5626 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(584216..585133) Ralstonia pickettii 12J 6287053 YP_001898133.1 CDS Rpic_0546 NC_010682.1 585332 586831 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bch:Bcen2424_6666 diguanylate cyclase; diguanylate cyclase complement(585332..586831) Ralstonia pickettii 12J 6287054 YP_001898134.1 CDS Rpic_0547 NC_010682.1 587072 587935 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N domain protein; NmrA family protein; KEGG: bam:Bamb_6340 NmrA family protein; NmrA family protein complement(587072..587935) Ralstonia pickettii 12J 6287055 YP_001898135.1 CDS Rpic_0548 NC_010682.1 588039 588938 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6341 transcriptional regulator, LysR family; LysR family transcriptional regulator 588039..588938 Ralstonia pickettii 12J 6287056 YP_001898136.1 CDS Rpic_0551 NC_010682.1 589473 589757 R KEGG: rso:RSc2698 hypothetical protein; hypothetical protein complement(589473..589757) Ralstonia pickettii 12J 6287115 YP_001898137.1 CDS Rpic_0552 NC_010682.1 589817 590197 R KEGG: reu:Reut_B5732 hypothetical protein; hypothetical protein complement(589817..590197) Ralstonia pickettii 12J 6287116 YP_001898138.1 CDS Rpic_0553 NC_010682.1 590285 590569 R KEGG: rso:RSc2700 hypothetical protein; hypothetical protein complement(590285..590569) Ralstonia pickettii 12J 6288047 YP_001898139.1 CDS Rpic_0554 NC_010682.1 590661 590987 R KEGG: rso:RSc2701 hypothetical protein; hypothetical protein complement(590661..590987) Ralstonia pickettii 12J 6288048 YP_001898140.1 CDS Rpic_0555 NC_010682.1 591537 591671 R hypothetical protein complement(591537..591671) Ralstonia pickettii 12J 6288049 YP_001898141.1 CDS Rpic_0556 NC_010682.1 591699 591929 D KEGG: reu:Reut_A0600 hypothetical protein; hypothetical protein 591699..591929 Ralstonia pickettii 12J 6288050 YP_001898142.1 CDS Rpic_0557 NC_010682.1 592011 592265 D KEGG: rso:RSc2703 hypothetical protein; hypothetical protein 592011..592265 Ralstonia pickettii 12J 6288485 YP_001898143.1 CDS Rpic_0558 NC_010682.1 592367 592579 D KEGG: rso:RSc2704 hypothetical protein; hypothetical protein 592367..592579 Ralstonia pickettii 12J 6288486 YP_001898144.1 CDS Rpic_0560 NC_010682.1 593755 594462 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_6299 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(593755..594462) Ralstonia pickettii 12J 6288488 YP_001898145.1 CDS Rpic_0561 NC_010682.1 594465 595229 R PFAM: regulatory protein DeoR; KEGG: bch:Bcen2424_6298 transcriptional regulator, DeoR family; DeoR family transcriptional regulator complement(594465..595229) Ralstonia pickettii 12J 6288711 YP_001898146.1 CDS Rpic_0562 NC_010682.1 595293 596468 R PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: bch:Bcen2424_6297 glycosyl hydrolase, BNR repeat-containing protein; glycosyl hydrolase family protein complement(595293..596468) Ralstonia pickettii 12J 6288712 YP_001898147.1 CDS Rpic_0563 NC_010682.1 596503 597933 R PFAM: Na+/solute symporter; KEGG: bch:Bcen2424_6296 Na+/solute symporter; Na+/solute symporter complement(596503..597933) Ralstonia pickettii 12J 6288713 YP_001898148.1 CDS Rpic_0564 NC_010682.1 598044 600356 R KEGG: bch:Bcen2424_6295 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; type III effector Hrp-dependent outers; 4-hydroxythreonine-4-phosphate dehydrogenase complement(598044..600356) Ralstonia pickettii 12J 6288714 YP_001898149.1 CDS Rpic_0565 NC_010682.1 600353 601522 R PFAM: iron-containing alcohol dehydrogenase; KEGG: bch:Bcen2424_6293 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(600353..601522) Ralstonia pickettii 12J 6287520 YP_001898150.1 CDS Rpic_0566 NC_010682.1 601556 602452 R TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bch:Bcen2424_6292 dihydrodipicolinate synthase; dihydrodipicolinate synthase complement(601556..602452) Ralstonia pickettii 12J 6287521 YP_001898151.1 CDS Rpic_0567 NC_010682.1 602820 602999 R hypothetical protein complement(602820..602999) Ralstonia pickettii 12J 6287522 YP_001898152.1 CDS Rpic_0569 NC_010682.1 603519 603797 D PFAM: protein of unknown function DUF156; KEGG: bpd:BURPS668_A2846 protein containing; hypothetical protein 603519..603797 Ralstonia pickettii 12J 6289834 YP_001898153.1 CDS Rpic_0570 NC_010682.1 603805 605109 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bpl:BURPS1106A_A2694 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 603805..605109 Ralstonia pickettii 12J 6289835 YP_001898154.1 CDS Rpic_0571 NC_010682.1 605235 606191 D KEGG: nha:Nham_4399 hypothetical protein; hypothetical protein 605235..606191 Ralstonia pickettii 12J 6289836 YP_001898155.1 CDS Rpic_0572 NC_010682.1 606387 606803 D PFAM: Domain of unknown function DUF1924; KEGG: pna:Pnap_1532 mono-heme class I cytochrome c; hypothetical protein 606387..606803 Ralstonia pickettii 12J 6289837 YP_001898156.1 CDS Rpic_0573 NC_010682.1 606837 607343 D PFAM: multihaem cytochrome; KEGG: bmu:Bmul_5868 multihaem cytochrome; multiheme cytochrome 606837..607343 Ralstonia pickettii 12J 6287625 YP_001898157.1 CDS Rpic_0574 NC_010682.1 607315 608046 D PFAM: cytochrome B561; KEGG: bvi:Bcep1808_6299 cytochrome b561; cytochrome B561 607315..608046 Ralstonia pickettii 12J 6287626 YP_001898158.1 CDS Rpic_0575 NC_010682.1 608078 608752 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmu:Bmul_5866 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 608078..608752 Ralstonia pickettii 12J 6287627 YP_001898159.1 CDS Rpic_0576 NC_010682.1 608749 610125 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bmu:Bmul_5865 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 608749..610125 Ralstonia pickettii 12J 6287628 YP_001898160.1 CDS Rpic_0577 NC_010682.1 610320 611246 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: reu:Reut_B5170 cation efflux protein; cation diffusion facilitator family transporter 610320..611246 Ralstonia pickettii 12J 6287504 YP_001898161.1 CDS groES NC_010682.1 611980 612270 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 611980..612270 Ralstonia pickettii 12J 6287505 YP_001898162.1 CDS groEL NC_010682.1 612375 614018 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 612375..614018 Ralstonia pickettii 12J 6287506 YP_001898163.1 CDS Rpic_0580 NC_010682.1 614249 615322 D PFAM: protein of unknown function DUF898 transmembrane; KEGG: rso:RSc0643 probable transmembrane protein; hypothetical protein 614249..615322 Ralstonia pickettii 12J 6287507 YP_001898164.1 CDS Rpic_0581 NC_010682.1 615350 616435 D PFAM: peptidase M48 Ste24p; KEGG: rso:RSc0644 putative transmembrane protein; peptidase M48 Ste24p 615350..616435 Ralstonia pickettii 12J 6287852 YP_001898165.1 CDS Rpic_0582 NC_010682.1 616635 617000 D PFAM: GtrA family protein; KEGG: rme:Rmet_0658 GtrA-like protein; GtrA family protein 616635..617000 Ralstonia pickettii 12J 6287853 YP_001898166.1 CDS Rpic_0583 NC_010682.1 617222 618466 D KEGG: reu:Reut_A2655 hypothetical protein; hypothetical protein 617222..618466 Ralstonia pickettii 12J 6287854 YP_001898167.1 CDS Rpic_0584 NC_010682.1 618476 618973 D PFAM: TadE family protein; KEGG: reu:Reut_A2654 TadE-like; TadE family protein 618476..618973 Ralstonia pickettii 12J 6287855 YP_001898168.1 CDS Rpic_0585 NC_010682.1 618966 619412 D PFAM: TadE family protein; KEGG: reu:Reut_A2653 TadE-like; TadE family protein 618966..619412 Ralstonia pickettii 12J 6287085 YP_001898169.1 CDS Rpic_0586 NC_010682.1 620247 621209 R PFAM: type II secretion system protein; KEGG: rme:Rmet_0639 type II secretion system protein; type II secretion system protein complement(620247..621209) Ralstonia pickettii 12J 6287086 YP_001898170.1 CDS Rpic_0587 NC_010682.1 621275 622252 R PFAM: type II secretion system protein; KEGG: reh:H16_A0710 flp pilus assembly protein TadB; type II secretion system protein complement(621275..622252) Ralstonia pickettii 12J 6287087 YP_001898171.1 CDS Rpic_0588 NC_010682.1 622317 623681 R PFAM: type II secretion system protein E; KEGG: rme:Rmet_0641 type II secretion system protein E; type II secretion system protein E complement(622317..623681) Ralstonia pickettii 12J 6287088 YP_001898172.1 CDS Rpic_0589 NC_010682.1 623721 624929 R PFAM: response regulator receiver; KEGG: reh:H16_A0712 flp pilus assembly ATPase; response regulator receiver protein complement(623721..624929) Ralstonia pickettii 12J 6288421 YP_001898173.1 CDS Rpic_0590 NC_010682.1 625046 625384 R KEGG: rme:Rmet_0646 putative lipoprotein; putative lipoprotein complement(625046..625384) Ralstonia pickettii 12J 6288422 YP_001898174.1 CDS Rpic_0591 NC_010682.1 625410 627401 R PFAM: type II and III secretion system protein; transport-associated; KEGG: rme:Rmet_0647 type II and III secretion system protein; type II and III secretion system protein complement(625410..627401) Ralstonia pickettii 12J 6288423 YP_001898175.1 CDS Rpic_0592 NC_010682.1 627517 628368 R TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: reh:H16_A0718 flp pilus assembly protein; Flp pilus assembly protein CpaB complement(627517..628368) Ralstonia pickettii 12J 6288424 YP_001898176.1 CDS Rpic_0593 NC_010682.1 628418 629917 R KEGG: reh:H16_A0719 predicted ATPase with chaperone activity; ATPase complement(628418..629917) Ralstonia pickettii 12J 6286645 YP_001898177.1 CDS Rpic_0594 NC_010682.1 629917 630462 R PFAM: peptidase A24A prepilin type IV; KEGG: rme:Rmet_0650 peptidase A24A, prepilin type IV; peptidase A24A prepilin type IV complement(629917..630462) Ralstonia pickettii 12J 6286646 YP_001898178.1 CDS Rpic_0595 NC_010682.1 630552 630722 R PFAM: Flp/Fap pilin component; KEGG: rme:Rmet_0651 Flp/Fap pilin component; Flp/Fap pilin component complement(630552..630722) Ralstonia pickettii 12J 6286647 YP_001898179.1 CDS Rpic_0596 NC_010682.1 630769 630939 R PFAM: Flp/Fap pilin component; KEGG: rme:Rmet_0652 Flp/Fap pilin component; Flp/Fap pilin component complement(630769..630939) Ralstonia pickettii 12J 6286648 YP_001898180.1 CDS Rpic_0597 NC_010682.1 631088 631255 R PFAM: Flp/Fap pilin component; KEGG: rme:Rmet_0653 Flp/Fap pilin component; Flp/Fap pilin component complement(631088..631255) Ralstonia pickettii 12J 6289273 YP_001898181.1 CDS Rpic_0598 NC_010682.1 632221 633492 D KEGG: rme:Rmet_0654 hypothetical protein; hypothetical protein 632221..633492 Ralstonia pickettii 12J 6289274 YP_001898182.1 CDS Rpic_0599 NC_010682.1 633500 634816 D KEGG: rme:Rmet_0655 hypothetical protein; hypothetical protein 633500..634816 Ralstonia pickettii 12J 6289275 YP_001898183.1 CDS Rpic_0600 NC_010682.1 634816 635829 D PFAM: glycosyl transferase family 2; KEGG: rme:Rmet_0656 glycosyl transferase, family 2; family 2 glycosyl transferase 634816..635829 Ralstonia pickettii 12J 6289276 YP_001898184.1 CDS Rpic_0601 NC_010682.1 636086 637147 R PFAM: acyltransferase 3; KEGG: azc:AZC_3119 putative acyltransferase; acyltransferase 3 complement(636086..637147) Ralstonia pickettii 12J 6286348 YP_001898185.1 CDS Rpic_0602 NC_010682.1 637157 638257 R PFAM: acyltransferase 3; KEGG: azc:AZC_3119 putative acyltransferase; acyltransferase 3 complement(637157..638257) Ralstonia pickettii 12J 6286349 YP_001898186.1 CDS Rpic_0603 NC_010682.1 638254 639582 R KEGG: rme:Rmet_0657 hypothetical protein; hypothetical protein complement(638254..639582) Ralstonia pickettii 12J 6286350 YP_001898187.1 CDS Rpic_0604 NC_010682.1 639628 641007 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: rme:Rmet_0659 sigma54 specific transcriptional regulator, fis family; Fis family sigma-54 specific transcriptional regulator complement(639628..641007) Ralstonia pickettii 12J 6286351 YP_001898188.1 CDS Rpic_0605 NC_010682.1 642134 642658 R PFAM: protein of unknown function DUF477; KEGG: rso:RSc0662 hypothetical protein; hypothetical protein complement(642134..642658) Ralstonia pickettii 12J 6288174 YP_001898189.1 CDS Rpic_0606 NC_010682.1 642674 643537 R PFAM: protein of unknown function DUF477; KEGG: rso:RSc0663 putative glycine rich transmembrane protein; hypothetical protein complement(642674..643537) Ralstonia pickettii 12J 6288175 YP_001898190.1 CDS Rpic_0607 NC_010682.1 643551 644177 R PFAM: LemA family protein; KEGG: rso:RSc0664 probable lipoprotein; LemA family protein complement(643551..644177) Ralstonia pickettii 12J 6288176 YP_001898191.1 CDS Rpic_0608 NC_010682.1 644283 644486 R hypothetical protein complement(644283..644486) Ralstonia pickettii 12J 6288177 YP_001898192.1 CDS Rpic_0609 NC_010682.1 644579 645487 D TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: rso:RSc0665 probable dihydrodipicolinate synthase-related transmembrane protein; dihydrodipicolinate synthase 644579..645487 Ralstonia pickettii 12J 6287896 YP_001898193.1 CDS Rpic_0610 NC_010682.1 646030 647331 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(646030..647331) Ralstonia pickettii 12J 6287897 YP_001898194.1 CDS Rpic_0611 NC_010682.1 647546 647728 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rso:RSc0667 probable rubredoxin protein; rubredoxin-type Fe(Cys)4 protein 647546..647728 Ralstonia pickettii 12J 6287898 YP_001898195.1 CDS Rpic_0612 NC_010682.1 648060 648518 D PFAM: response regulator receiver; KEGG: rso:RSc0668 probable twitching motility two-component response regulator transcription regulator protein; response regulator receiver protein 648060..648518 Ralstonia pickettii 12J 6287899 YP_001898196.1 CDS Rpic_0613 NC_010682.1 648549 648917 D PFAM: response regulator receiver; KEGG: rso:RSc0669 putative twitching motility two-component response regulator transcription regulator protein; response regulator receiver protein 648549..648917 Ralstonia pickettii 12J 6287117 YP_001898197.1 CDS Rpic_0614 NC_010682.1 648994 649539 D PFAM: CheW domain protein; KEGG: rso:RSc0670 putative twitching motility protein; CheW protein 648994..649539 Ralstonia pickettii 12J 6287118 YP_001898198.1 CDS Rpic_0615 NC_010682.1 649798 652035 D PFAM: chemotaxis sensory transducer; KEGG: rso:RSc0671 putative twitching motility transmembrane protein; methyl-accepting chemotaxis sensory transducer 649798..652035 Ralstonia pickettii 12J 6287119 YP_001898199.1 CDS Rpic_0616 NC_010682.1 652126 658155 D PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: rso:RSc0672 putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein; CheA signal transduction histidine kinase 652126..658155 Ralstonia pickettii 12J 6287120 YP_001898200.1 CDS Rpic_0617 NC_010682.1 658227 659783 R PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: reu:Reut_A0703 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase complement(658227..659783) Ralstonia pickettii 12J 6288477 YP_001898201.1 CDS Rpic_0618 NC_010682.1 659863 660609 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rso:RSc0674 probable ribosomal small subunit pseudouridine synthase A protein; pseudouridine synthase 659863..660609 Ralstonia pickettii 12J 6288478 YP_001898202.1 CDS Rpic_0619 NC_010682.1 660707 661279 D PFAM: protein of unknown function DUF179; KEGG: rso:RSc0675 hypothetical protein; hypothetical protein 660707..661279 Ralstonia pickettii 12J 6288479 YP_001898203.1 CDS Rpic_0620 NC_010682.1 661272 661703 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 661272..661703 Ralstonia pickettii 12J 6288480 YP_001898204.1 CDS Rpic_0621 NC_010682.1 661700 662218 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 661700..662218 Ralstonia pickettii 12J 6287397 YP_001898205.1 CDS pyrB NC_010682.1 662289 663260 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 662289..663260 Ralstonia pickettii 12J 6287398 YP_001898206.1 CDS Rpic_0623 NC_010682.1 663269 664546 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 663269..664546 Ralstonia pickettii 12J 6287399 YP_001898207.1 CDS Rpic_0624 NC_010682.1 664533 665330 D PFAM: phospholipid/glycerol acyltransferase; KEGG: rso:RSc0680 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase transmembrane protein; phospholipid/glycerol acyltransferase 664533..665330 Ralstonia pickettii 12J 6287400 YP_001898208.1 CDS apaH NC_010682.1 665340 666188 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(665340..666188) Ralstonia pickettii 12J 6289033 YP_001898209.1 CDS Rpic_0626 NC_010682.1 666241 667119 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: rso:RSc0690 probable transmembrane protein; lipopolysaccharide biosynthesis protein complement(666241..667119) Ralstonia pickettii 12J 6289034 YP_001898210.1 CDS Rpic_0627 NC_010682.1 667131 668222 R PFAM: glycosyl transferase family 4; KEGG: rso:RSc0689 putative undecaprenyl phosphate N-acetylglucosaminyltransferase transmembrane protein; glycosyl transferase family protein complement(667131..668222) Ralstonia pickettii 12J 6289035 YP_001898211.1 CDS Rpic_0628 NC_010682.1 668283 669125 R PFAM: glycosyl transferase family 2; KEGG: pmu:PM0512 lsg locus, lipopolysaccharide biosynthesis protein; family 2 glycosyl transferase complement(668283..669125) Ralstonia pickettii 12J 6289036 YP_001898212.1 CDS Rpic_0629 NC_010682.1 669138 670064 R TIGRFAM: rhamnosyltransferase; PFAM: glycosyl transferase family 2; KEGG: noc:Noc_2177 rhamnosyltransferase; rhamnosyltransferase complement(669138..670064) Ralstonia pickettii 12J 6288124 YP_001898213.1 CDS Rpic_0630 NC_010682.1 670067 671374 R hypothetical protein complement(670067..671374) Ralstonia pickettii 12J 6288125 YP_001898214.1 CDS Rpic_0631 NC_010682.1 671371 672453 R PFAM: acyltransferase 3; KEGG: mxa:MXAN_3238 acyltransferase family protein; acyltransferase 3 complement(671371..672453) Ralstonia pickettii 12J 6288126 YP_001898215.1 CDS Rpic_0632 NC_010682.1 672450 673391 R PFAM: glycosyl transferase family 2; KEGG: xac:XAC1693 glycosyl transferase; family 2 glycosyl transferase complement(672450..673391) Ralstonia pickettii 12J 6288127 YP_001898216.1 CDS Rpic_0633 NC_010682.1 673388 674635 R PFAM: polysaccharide biosynthesis protein; KEGG: gur:Gura_3189 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(673388..674635) Ralstonia pickettii 12J 6289005 YP_001898217.1 CDS Rpic_0634 NC_010682.1 674632 675756 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rfr:Rfer_1239 DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase complement(674632..675756) Ralstonia pickettii 12J 6289006 YP_001898218.1 CDS Rpic_0635 NC_010682.1 675801 676568 R KEGG: dol:Dole_1288 hypothetical protein; hypothetical protein complement(675801..676568) Ralstonia pickettii 12J 6289007 YP_001898219.1 CDS Rpic_0636 NC_010682.1 676565 676975 R PFAM: WxcM domain protein domain protein; KEGG: sbn:Sbal195_3028 WxcM domain protein; WxcM domain-containing protein complement(676565..676975) Ralstonia pickettii 12J 6289008 YP_001898220.1 CDS Rpic_0637 NC_010682.1 676965 677885 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bch:Bcen2424_0874 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(676965..677885) Ralstonia pickettii 12J 6287065 YP_001898221.1 CDS Rpic_0638 NC_010682.1 677882 678436 R KEGG: rso:RSc0685 probable dTDP-4-dehydrorhamnose 3,5-epimerase protein; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(677882..678436) Ralstonia pickettii 12J 6287066 YP_001898222.1 CDS Rpic_0639 NC_010682.1 678433 679317 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bmu:Bmul_2597 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase complement(678433..679317) Ralstonia pickettii 12J 6287067 YP_001898223.1 CDS Rpic_0640 NC_010682.1 679332 680393 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bmu:Bmul_2596 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(679332..680393) Ralstonia pickettii 12J 6287068 YP_001898224.1 CDS Rpic_0641 NC_010682.1 680570 681958 D PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rso:RSc0691 putative phosphomannomutase or phosphoglucomutase protein; phosphomannomutase 680570..681958 Ralstonia pickettii 12J 6286468 YP_001898225.1 CDS Rpic_0642 NC_010682.1 682002 683000 D TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: rso:RSc0692 probable lipopolysaccharide heptosyltransferase protein; lipopolysaccharide heptosyltransferase I 682002..683000 Ralstonia pickettii 12J 6286469 YP_001898226.1 CDS Rpic_0643 NC_010682.1 683000 684316 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 683000..684316 Ralstonia pickettii 12J 6286470 YP_001898227.1 CDS Rpic_0644 NC_010682.1 684418 685098 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: rso:RSc0694 probable transmembrane protein; hypothetical protein 684418..685098 Ralstonia pickettii 12J 6286471 YP_001898228.1 CDS Rpic_0645 NC_010682.1 685099 686565 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rso:RSc0695 probable porin (OMP) ABC transporter protein; TolC family type I secretion outer membrane protein complement(685099..686565) Ralstonia pickettii 12J 6287420 YP_001898229.1 CDS Rpic_0646 NC_010682.1 686681 687013 R PFAM: Rhodanese domain protein; KEGG: rso:RSc0696 hypothetical protein; rhodanese domain-containing protein complement(686681..687013) Ralstonia pickettii 12J 6287421 YP_001898230.1 CDS Rpic_0647 NC_010682.1 687036 687686 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; KEGG: rso:RSc0697 probable protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(687036..687686) Ralstonia pickettii 12J 6287422 YP_001898231.1 CDS Rpic_0648 NC_010682.1 687782 688525 R PFAM: regulatory protein TetR; KEGG: rso:RSc0698 putative transcription regulator protein; TetR family transcriptional regulator complement(687782..688525) Ralstonia pickettii 12J 6287423 YP_001898232.1 CDS Rpic_0649 NC_010682.1 688707 688964 D PFAM: protein of unknown function UPF0153; KEGG: azo:azo0713 hypothetical protein; hypothetical protein 688707..688964 Ralstonia pickettii 12J 6288762 YP_001898233.1 CDS Rpic_0650 NC_010682.1 688971 689564 D KEGG: rso:RSc0700 probable transmembrane protein; hypothetical protein 688971..689564 Ralstonia pickettii 12J 6288763 YP_001898234.1 CDS Rpic_0651 NC_010682.1 689617 690498 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 689617..690498 Ralstonia pickettii 12J 6288764 YP_001898235.1 CDS Rpic_0652 NC_010682.1 690618 691730 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rso:RSc0702 putative NADH-dependent flavin oxidoreductase oxidoreductase protein; NADH:flavin oxidoreductase 690618..691730 Ralstonia pickettii 12J 6288765 YP_001898236.1 CDS trmB NC_010682.1 691756 692529 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(691756..692529) Ralstonia pickettii 12J 6288040 YP_001898237.1 CDS Rpic_0654 NC_010682.1 692748 693461 R KEGG: rso:RSc0707 probable protein with proline-alanine-aspartic repeated motif; hypothetical protein complement(692748..693461) Ralstonia pickettii 12J 6288042 YP_001898238.1 CDS Rpic_0655 NC_010682.1 693591 695645 R AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase complement(693591..695645) Ralstonia pickettii 12J 6286769 YP_001898239.1 CDS Rpic_0656 NC_010682.1 695726 697237 R TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: mms:mma_2905 succinate-semialdehyde dehydrogenase (NADP+); succinate-semialdehyde dehydrogenase complement(695726..697237) Ralstonia pickettii 12J 6286770 YP_001898240.1 CDS Rpic_0657 NC_010682.1 697367 698878 R TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: rso:RSc0708 hypothetical protein; UbiD family decarboxylase complement(697367..698878) Ralstonia pickettii 12J 6286771 YP_001898241.1 CDS Rpic_0658 NC_010682.1 699416 700603 D PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc0709 probable transmembrane protein; lytic transglycosylase catalytic subunit 699416..700603 Ralstonia pickettii 12J 6286772 YP_001898242.1 CDS Rpic_0659 NC_010682.1 700683 701867 R PFAM: aminotransferase class I and II; KEGG: rso:RSc0710 aminotransferase; aminotransferase complement(700683..701867) Ralstonia pickettii 12J 6288299 YP_001898243.1 CDS nusB NC_010682.1 701912 702379 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(701912..702379) Ralstonia pickettii 12J 6288300 YP_001898244.1 CDS ribH NC_010682.1 702407 702907 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(702407..702907) Ralstonia pickettii 12J 6288301 YP_001898245.1 CDS Rpic_0662 NC_010682.1 702989 704128 R bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein complement(702989..704128) Ralstonia pickettii 12J 6288302 YP_001898246.1 CDS Rpic_0663 NC_010682.1 704256 704909 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(704256..704909) Ralstonia pickettii 12J 6288739 YP_001898247.1 CDS Rpic_0664 NC_010682.1 704916 706028 R KEGG: rso:RSc0715 probable riboflavin biosynthesis bifunctional RibD : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD complement(704916..706028) Ralstonia pickettii 12J 6288740 YP_001898248.1 CDS Rpic_0665 NC_010682.1 706053 706625 R KEGG: rso:RSc0716 putative type 4 fimbrial pilin related transmembrane protein; putative type 4 fimbrial pilin related transmembrane protein complement(706053..706625) Ralstonia pickettii 12J 6288741 YP_001898249.1 CDS Rpic_0666 NC_010682.1 706622 707026 R KEGG: rso:RSc0717 putative type-4 frimbrial pilin-related signal peptide protein; putative type-4 frimbrial pilin-related signal peptide protein complement(706622..707026) Ralstonia pickettii 12J 6288742 YP_001898250.1 CDS Rpic_0667 NC_010682.1 707023 707814 R KEGG: rso:RSc0719 probable signal peptide protein; Tfp pilus assembly protein PilX-like protein complement(707023..707814) Ralstonia pickettii 12J 6286498 YP_001898251.1 CDS Rpic_0668 NC_010682.1 707808 708740 R KEGG: rso:RSc0720 probable transmembrane protein; hypothetical protein complement(707808..708740) Ralstonia pickettii 12J 6286499 YP_001898252.1 CDS Rpic_0669 NC_010682.1 708742 708942 R KEGG: rso:RSc0721 probable transmembrane protein; hypothetical protein complement(708742..708942) Ralstonia pickettii 12J 6286500 YP_001898253.1 CDS Rpic_0670 NC_010682.1 709385 710029 D KEGG: xft:PD1615 hypothetical protein; Tfp pilus assembly protein FimT-like protein 709385..710029 Ralstonia pickettii 12J 6286501 YP_001898254.1 CDS Rpic_0671 NC_010682.1 710026 710529 D TIGRFAM: type IV pilus modification protein PilV; KEGG: lpc:LPC_2663 type IV fimbrial biogenesis protein PilV; type IV pilus modification protein PilV 710026..710529 Ralstonia pickettii 12J 6287376 YP_001898255.1 CDS Rpic_0672 NC_010682.1 710526 711560 D KEGG: noc:Noc_2272 type IV pilus assembly protein PilW; type IV pilus assembly protein PilW 710526..711560 Ralstonia pickettii 12J 6287377 YP_001898256.1 CDS Rpic_0673 NC_010682.1 711560 712129 D KEGG: hch:HCH_05928 hypothetical protein; hypothetical protein 711560..712129 Ralstonia pickettii 12J 6287378 YP_001898257.1 CDS Rpic_0674 NC_010682.1 712134 715502 D KEGG: noc:Noc_2274 fimbrial assembly protein; Tfp pilus assembly protein tip-associated adhesin PilY1-like protein 712134..715502 Ralstonia pickettii 12J 6287379 YP_001898258.1 CDS Rpic_0675 NC_010682.1 715513 715872 D hypothetical protein 715513..715872 Ralstonia pickettii 12J 6288853 YP_001898259.1 CDS Rpic_0676 NC_010682.1 715869 716303 D KEGG: xoo:XOO3195 type IV pilin; type IV pilin 715869..716303 Ralstonia pickettii 12J 6288854 YP_001898260.1 CDS nrdR NC_010682.1 716349 716813 R PFAM: ATP-cone domain protein; KEGG: rso:RSc0728 hypothetical protein; transcriptional regulator NrdR complement(716349..716813) Ralstonia pickettii 12J 6288855 YP_001898261.1 CDS glyA NC_010682.1 716948 718195 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(716948..718195) Ralstonia pickettii 12J 6288856 YP_001898262.1 CDS Rpic_0679 NC_010682.1 718596 719348 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc0730 probable oxidoreductase protein; short-chain dehydrogenase/reductase SDR 718596..719348 Ralstonia pickettii 12J 6287641 YP_001898263.1 CDS Rpic_0680 NC_010682.1 719418 719822 D TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rso:RSc0731 putative thioesterase protein; tol-pal system-associated acyl-CoA thioesterase 719418..719822 Ralstonia pickettii 12J 6287642 YP_001898264.1 CDS Rpic_0681 NC_010682.1 719819 720511 D TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: rso:RSc0732 probable TolQ-related transport transmembrane protein; protein TolQ 719819..720511 Ralstonia pickettii 12J 6287643 YP_001898265.1 CDS Rpic_0682 NC_010682.1 720524 720958 D TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rso:RSc0733 putative TolR-related transport transmembrane protein; protein TolR 720524..720958 Ralstonia pickettii 12J 6287644 YP_001898266.1 CDS Rpic_0683 NC_010682.1 720996 722024 D TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: rso:RSc0734 probable TolA-related transport transmembrane protein; protein TolA 720996..722024 Ralstonia pickettii 12J 6289389 YP_001898267.1 CDS tolB NC_010682.1 722091 723395 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 722091..723395 Ralstonia pickettii 12J 6289390 YP_001898268.1 CDS Rpic_0685 NC_010682.1 723425 723946 D TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rso:RSc0736 probable peptidoglycan-associated lipoprotein precursor; peptidoglycan-associated lipoprotein 723425..723946 Ralstonia pickettii 12J 6289391 YP_001898269.1 CDS Rpic_0686 NC_010682.1 724015 724800 D TIGRFAM: tol-pal system protein YbgF; KEGG: rso:RSc0737 probable transmembrane protein; tol-pal system protein YbgF 724015..724800 Ralstonia pickettii 12J 6289392 YP_001898270.1 CDS Rpic_0687 NC_010682.1 724964 725638 D TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: rso:RSc0738 hypothetical signal peptide protein; exsB protein 724964..725638 Ralstonia pickettii 12J 6286561 YP_001898271.1 CDS Rpic_0688 NC_010682.1 725645 726760 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rso:RSc0739 probable transmembrane protein; hypothetical protein 725645..726760 Ralstonia pickettii 12J 6286562 YP_001898272.1 CDS Rpic_0689 NC_010682.1 727161 727931 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bmu:Bmul_1525 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 727161..727931 Ralstonia pickettii 12J 6286564 YP_001898273.1 CDS Rpic_0690 NC_010682.1 727961 728950 D PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A5029 sugar kinase, ribokinase family; PfkB domain-containing protein 727961..728950 Ralstonia pickettii 12J 6289002 YP_001898274.1 CDS Rpic_0691 NC_010682.1 729010 730290 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bmu:Bmul_1527 major facilitator superfamily MFS_1; major facilitator superfamily protein 729010..730290 Ralstonia pickettii 12J 6289003 YP_001898275.1 CDS Rpic_0692 NC_010682.1 730295 731269 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bmu:Bmul_1528 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; gluconate 2-dehydrogenase 730295..731269 Ralstonia pickettii 12J 6289004 YP_001898276.1 CDS Rpic_0693 NC_010682.1 731349 732413 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bch:Bcen2424_1729 transcriptional regulator, LacI family; LacI family transcriptional regulator 731349..732413 Ralstonia pickettii 12J 6286247 YP_001898277.1 CDS Rpic_0694 NC_010682.1 732410 732895 D PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: rso:RSc0745 hypothetical protein; nucleoside 2-deoxyribosyltransferase 732410..732895 Ralstonia pickettii 12J 6286248 YP_001898278.1 CDS Rpic_0695 NC_010682.1 732997 734169 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bpl:BURPS1106A_A0453 acyl-CoA dehydrogenase C-terminal domain protein; acyl-CoA dehydrogenase type 2 domain 732997..734169 Ralstonia pickettii 12J 6286249 YP_001898279.1 CDS Rpic_0696 NC_010682.1 734259 735161 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: rso:RSc0746 putative alpha-ketoglutarate-dependent taurine dioxygenase oxidoreductase protein; taurine dioxygenase 734259..735161 Ralstonia pickettii 12J 6286250 YP_001898280.1 CDS Rpic_0697 NC_010682.1 735173 735634 R PFAM: NUDIX hydrolase; KEGG: rso:RSc0747 hypothetical protein; NUDIX hydrolase complement(735173..735634) Ralstonia pickettii 12J 6286404 YP_001898281.1 CDS Rpic_0698 NC_010682.1 735636 736445 R PFAM: conserved hypothetical protein; KEGG: rso:RSc0748 probable transmembrane protein; hypothetical protein complement(735636..736445) Ralstonia pickettii 12J 6286405 YP_001898282.1 CDS Rpic_0699 NC_010682.1 736442 737116 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0749 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(736442..737116) Ralstonia pickettii 12J 6286406 YP_001898283.1 CDS Rpic_0700 NC_010682.1 737427 737792 D KEGG: rso:RSc0750 probable transmembrane protein; hypothetical protein 737427..737792 Ralstonia pickettii 12J 6286407 YP_001898284.1 CDS Rpic_0701 NC_010682.1 737854 738381 R KEGG: rso:RSc0751 hypothetical protein; hypothetical protein complement(737854..738381) Ralstonia pickettii 12J 6286472 YP_001898285.1 CDS Rpic_0702 NC_010682.1 738378 738755 R KEGG: rso:RSc0752 probable transmembrane protein; hypothetical protein complement(738378..738755) Ralstonia pickettii 12J 6286473 YP_001898286.1 CDS Rpic_0703 NC_010682.1 738896 739288 R PFAM: protein of unknown function DUF883 ElaB; KEGG: rso:RSc0753 probable transmembrane protein; hypothetical protein complement(738896..739288) Ralstonia pickettii 12J 6286474 YP_001898287.1 CDS Rpic_0704 NC_010682.1 739505 740143 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc0754 probable antioxidant (peroxidase) oxidoreductase protein; peroxidase 739505..740143 Ralstonia pickettii 12J 6286475 YP_001898288.1 CDS Rpic_0705 NC_010682.1 740291 741673 R PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rso:RSc0755 probable transmembrane protein; xanthine/uracil/vitamin C permease complement(740291..741673) Ralstonia pickettii 12J 6288347 YP_001898289.1 CDS Rpic_0706 NC_010682.1 742083 743276 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc0756 probable glutaryl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(742083..743276) Ralstonia pickettii 12J 6288348 YP_001898290.1 CDS Rpic_0707 NC_010682.1 743380 744204 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rso:RSc0757 putative transcription regulator protein; IclR family transcriptional regulator 743380..744204 Ralstonia pickettii 12J 6288349 YP_001898291.1 CDS Rpic_0708 NC_010682.1 744215 745051 R TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: rso:RSc0758 putative oxygenase oxidoreductase protein; tryptophan 2,3-dioxygenase complement(744215..745051) Ralstonia pickettii 12J 6288350 YP_001898292.1 CDS Rpic_0709 NC_010682.1 745092 746345 R TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: rso:RSc0759 probable hydrolase protein; kynureninase complement(745092..746345) Ralstonia pickettii 12J 6289491 YP_001898293.1 CDS Rpic_0710 NC_010682.1 746393 747022 R TIGRFAM: arylformamidase; PFAM: cyclase family protein; KEGG: rso:RSc0760 hypothetical protein; arylformamidase complement(746393..747022) Ralstonia pickettii 12J 6289492 YP_001898294.1 CDS Rpic_0711 NC_010682.1 747171 747698 D PFAM: regulatory protein AsnC/Lrp family; KEGG: rso:RSc0761 probable transcription regulator protein; AsnC family transcriptional regulator 747171..747698 Ralstonia pickettii 12J 6289493 YP_001898295.1 CDS Rpic_0712 NC_010682.1 747787 747993 D KEGG: rso:RSc0762 hypothetical protein; hypothetical protein 747787..747993 Ralstonia pickettii 12J 6289494 YP_001898296.1 CDS Rpic_0713 NC_010682.1 748006 748584 R PFAM: flavin reductase domain protein FMN-binding; KEGG: rso:RSc0763 putative monooxygenase oxidoreductase protein; flavin reductase domain-containing protein complement(748006..748584) Ralstonia pickettii 12J 6287653 YP_001898297.1 CDS Rpic_0714 NC_010682.1 748766 749326 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 748766..749326 Ralstonia pickettii 12J 6287654 YP_001898298.1 CDS Rpic_0715 NC_010682.1 749342 750427 R PFAM: protein of unknown function DUF72; KEGG: rso:RSc0765 hypothetical protein; hypothetical protein complement(749342..750427) Ralstonia pickettii 12J 6287655 YP_001898299.1 CDS Rpic_0716 NC_010682.1 750432 751652 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc0766 putative cyclopropane-fatty-acyl-phospholipid synthase protein; cyclopropane-fatty-acyl-phospholipid synthase complement(750432..751652) Ralstonia pickettii 12J 6287656 YP_001898300.1 CDS Rpic_0717 NC_010682.1 751848 752486 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase complement(751848..752486) Ralstonia pickettii 12J 6287355 YP_001898301.1 CDS Rpic_0718 NC_010682.1 752691 753176 D KEGG: rso:RSc0770 putative transmembrane dehydrogenase (small subunit) oxidoreductase protein; putative transmembrane dehydrogenase (small subunit) oxidoreductase protein 752691..753176 Ralstonia pickettii 12J 6287356 YP_001898302.1 CDS Rpic_0719 NC_010682.1 753176 754786 D PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: rso:RSc0771 putative transmembrane dehydrogenase (large subunit) oxidoreductase protein; glucose-methanol-choline oxidoreductase 753176..754786 Ralstonia pickettii 12J 6287357 YP_001898303.1 CDS Rpic_0720 NC_010682.1 754788 756071 D KEGG: rso:RSc0772 putative oxidoreductase dehydrogenase (cytochrome c subunit) signal peptide protein; gluconate 2-dehydrogenase 754788..756071 Ralstonia pickettii 12J 6287358 YP_001898304.1 CDS Rpic_0721 NC_010682.1 756093 758390 R PFAM: AsmA family protein; KEGG: rso:RSc0773 probable transmembrane protein; AsmA family protein complement(756093..758390) Ralstonia pickettii 12J 6286195 YP_001898305.1 CDS Rpic_0722 NC_010682.1 758472 759374 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: rso:RSc0774 probable transmembrane protein; UBA/THIF-type NAD/FAD binding protein 758472..759374 Ralstonia pickettii 12J 6286196 YP_001898306.1 CDS Rpic_0723 NC_010682.1 759387 759710 R PFAM: Thioredoxin domain; KEGG: bvi:Bcep1808_2659 thioredoxin; Thioredoxin domain complement(759387..759710) Ralstonia pickettii 12J 6286197 YP_001898307.1 CDS Rpic_0724 NC_010682.1 759808 760224 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rso:RSc0777 hypothetical protein; cation-binding hemerythrin HHE family protein complement(759808..760224) Ralstonia pickettii 12J 6286198 YP_001898308.1 CDS Rpic_0725 NC_010682.1 760306 760971 R PFAM: DSBA oxidoreductase; KEGG: rso:RSc0778 hypothetical protein; DSBA oxidoreductase complement(760306..760971) Ralstonia pickettii 12J 6286420 YP_001898309.1 CDS Rpic_0726 NC_010682.1 760981 761826 R KEGG: rso:RSc0779 putative thioredoxin protein; TIGRFAM: thioredoxin; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Thioredoxin domain; SMART: Tetratricopeptide domain protein; thioredoxin complement(760981..761826) Ralstonia pickettii 12J 6286421 YP_001898310.1 CDS Rpic_0727 NC_010682.1 762026 763732 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 762026..763732 Ralstonia pickettii 12J 6286422 YP_001898311.1 CDS Rpic_0728 NC_010682.1 763772 764566 R PFAM: Ankyrin; KEGG: rso:RSc0781 probable ankyrin repeat harboring signal peptide protein; ankyrin complement(763772..764566) Ralstonia pickettii 12J 6286423 YP_001898312.1 CDS Rpic_0729 NC_010682.1 764578 765327 R PFAM: ChaC family protein; KEGG: rso:RSc0782 hypothetical protein; ChaC family protein complement(764578..765327) Ralstonia pickettii 12J 6287594 YP_001898313.1 CDS Rpic_0730 NC_010682.1 765605 765958 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rso:RSc0784 probable FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)(immunophilin) protein; FKBP-type peptidylprolyl isomerase complement(765605..765958) Ralstonia pickettii 12J 6287596 YP_001898314.1 CDS Rpic_0731 NC_010682.1 766000 766551 R PFAM: YaeQ family protein; KEGG: rso:RSc0785 hypothetical protein; YaeQ family protein complement(766000..766551) Ralstonia pickettii 12J 6287185 YP_001898315.1 CDS Rpic_0732 NC_010682.1 766724 769585 D KEGG: rso:RSc0786 hypothetical protein; hypothetical protein 766724..769585 Ralstonia pickettii 12J 6287186 YP_001898316.1 CDS Rpic_0733 NC_010682.1 769582 770904 D KEGG: rso:RSc0787 probable transmembrane protein; hypothetical protein 769582..770904 Ralstonia pickettii 12J 6287187 YP_001898317.1 CDS Rpic_0734 NC_010682.1 770967 771350 R KEGG: rso:RSc0788 probable transmembrane protein; hypothetical protein complement(770967..771350) Ralstonia pickettii 12J 6287188 YP_001898318.1 CDS Rpic_0735 NC_010682.1 771438 771659 R KEGG: rso:RSc0789 hypothetical protein; hypothetical protein complement(771438..771659) Ralstonia pickettii 12J 6286711 YP_001898319.1 CDS Rpic_0736 NC_010682.1 771686 772249 R PFAM: YceI family protein; KEGG: rso:RSc0790 probable signal peptide protein; hypothetical protein complement(771686..772249) Ralstonia pickettii 12J 6286712 YP_001898320.1 CDS Rpic_0737 NC_010682.1 772294 774024 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(772294..774024) Ralstonia pickettii 12J 6286713 YP_001898321.1 CDS Rpic_0738 NC_010682.1 774087 775139 R PFAM: lipase chaperone; KEGG: rme:Rmet_3795 lipase chaperone; lipase chaperone complement(774087..775139) Ralstonia pickettii 12J 6286714 YP_001898322.1 CDS Rpic_0739 NC_010682.1 775170 776168 R PFAM: alpha/beta hydrolase fold; Protein of unknown function DUF676 hydrolase domain protein; PGAP1 family protein; KEGG: bte:BTH_II0639 lipase; triacylglycerol lipase complement(775170..776168) Ralstonia pickettii 12J 6287169 YP_001898323.1 CDS Rpic_0740 NC_010682.1 776359 777861 R PFAM: protein of unknown function DUF112 transmembrane; KEGG: rso:RSc0793 probable transmembrane protein; hypothetical protein complement(776359..777861) Ralstonia pickettii 12J 6287170 YP_001898324.1 CDS Rpic_0741 NC_010682.1 777881 778339 R PFAM: protein of unknown function DUF1468; KEGG: rso:RSc0794 probable transmembrane protein; hypothetical protein complement(777881..778339) Ralstonia pickettii 12J 6287171 YP_001898325.1 CDS Rpic_0742 NC_010682.1 778601 779053 R KEGG: rso:RSc0795 probable transmembrane protein; hypothetical protein complement(778601..779053) Ralstonia pickettii 12J 6287172 YP_001898326.1 CDS Rpic_0743 NC_010682.1 779099 780319 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rso:RSc0796 putative transmembrane protein; L-carnitine dehydratase/bile acid-inducible protein F complement(779099..780319) Ralstonia pickettii 12J 6288635 YP_001898327.1 CDS alaS NC_010682.1 780478 783144 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 780478..783144 Ralstonia pickettii 12J 6288636 YP_001898328.1 CDS Rpic_0745 NC_010682.1 783599 784714 D PFAM: purine nucleoside permease; KEGG: rso:RSc0798 putative purine nucleoside permease protein; purine nucleoside permease 783599..784714 Ralstonia pickettii 12J 6288637 YP_001898329.1 CDS Rpic_0746 NC_010682.1 784711 785760 D PFAM: purine nucleoside permease; KEGG: rso:RSc0799 putative purine nucleoside permease protein; purine nucleoside permease 784711..785760 Ralstonia pickettii 12J 6288638 YP_001898330.1 CDS Rpic_0747 NC_010682.1 785992 788100 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RSc0800 putative ferrisiderophore receptor signal peptide protein; TonB-dependent siderophore receptor 785992..788100 Ralstonia pickettii 12J 6289802 YP_001898331.1 CDS Rpic_0748 NC_010682.1 788107 788865 R PFAM: band 7 protein; KEGG: rso:RSc0802 putative stomatin-like transmembrane protein; hypothetical protein complement(788107..788865) Ralstonia pickettii 12J 6289803 YP_001898332.1 CDS Rpic_0749 NC_010682.1 788877 790271 R PFAM: protein of unknown function DUF107; KEGG: rso:RSc0803 probable transmembrane protein; hypothetical protein complement(788877..790271) Ralstonia pickettii 12J 6289804 YP_001898333.1 CDS Rpic_0750 NC_010682.1 790346 791254 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0804 probable transcription regulator protein; LysR family transcriptional regulator complement(790346..791254) Ralstonia pickettii 12J 6289805 YP_001898334.1 CDS Rpic_0751 NC_010682.1 791357 792571 D PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: rso:RSc0805 hypothetical protein; hypothetical protein 791357..792571 Ralstonia pickettii 12J 6287559 YP_001898335.1 CDS Rpic_0752 NC_010682.1 792647 793432 D PFAM: class II aldolase/adducin family protein; KEGG: rso:RSc0806 hypothetical protein; aldolase II superfamily protein 792647..793432 Ralstonia pickettii 12J 6287560 YP_001898336.1 CDS Rpic_0753 NC_010682.1 793488 793676 D 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase 793488..793676 Ralstonia pickettii 12J 6287561 YP_001898337.1 CDS Rpic_0754 NC_010682.1 793711 794757 D PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rso:RSc0808 probable low specificity L-threonine aldolase protein; threonine aldolase 793711..794757 Ralstonia pickettii 12J 6287562 YP_001898338.1 CDS Rpic_0755 NC_010682.1 794772 795353 D PFAM: NUDIX hydrolase; KEGG: rso:RSc0809 hypothetical protein; NUDIX hydrolase 794772..795353 Ralstonia pickettii 12J 6286389 YP_001898339.1 CDS Rpic_0756 NC_010682.1 795401 795628 D PFAM: SirA family protein; KEGG: rso:RSc0810 hypothetical protein; SirA family protein 795401..795628 Ralstonia pickettii 12J 6286390 YP_001898340.1 CDS Rpic_0757 NC_010682.1 795723 796589 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc0814 probable transmembrane protein; Lysine exporter protein LysE/YggA complement(795723..796589) Ralstonia pickettii 12J 6286391 YP_001898341.1 CDS Rpic_0758 NC_010682.1 796644 799100 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rme:Rmet_4989 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 796644..799100 Ralstonia pickettii 12J 6286392 YP_001898342.1 CDS Rpic_0759 NC_010682.1 799291 801747 D KEGG: bpd:BURPS668_A0191 sensor protein EvgS; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; SMART: extracellular solute-binding protein family 3; multi-sensor hybrid histidine kinase 799291..801747 Ralstonia pickettii 12J 6288770 YP_001898343.1 CDS Rpic_0760 NC_010682.1 801757 801882 R hypothetical protein complement(801757..801882) Ralstonia pickettii 12J 6288771 YP_001898344.1 CDS Rpic_0761 NC_010682.1 802086 802670 D PFAM: Fimbrial protein; KEGG: pfo:Pfl_3042 fimbrial protein; Fimbrial protein 802086..802670 Ralstonia pickettii 12J 6288772 YP_001898345.1 CDS Rpic_0762 NC_010682.1 802755 803501 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: pfo:Pfl_3043 pili assembly chaperone; Pili assembly chaperone, N-terminal 802755..803501 Ralstonia pickettii 12J 6288773 YP_001898346.1 CDS Rpic_0763 NC_010682.1 803619 806177 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pfo:Pfl_3044 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 803619..806177 Ralstonia pickettii 12J 6288982 YP_001898347.1 CDS Rpic_0764 NC_010682.1 806255 806644 D KEGG: pfo:Pfl_3037 fimbrial protein; fimbrial protein 806255..806644 Ralstonia pickettii 12J 6288983 YP_001898348.1 CDS Rpic_0765 NC_010682.1 806641 807270 D PFAM: Fimbrial protein; KEGG: pfo:Pfl_3037 fimbrial protein; Fimbrial protein 806641..807270 Ralstonia pickettii 12J 6288984 YP_001898349.1 CDS Rpic_0766 NC_010682.1 807802 811584 R PFAM: protein of unknown function DUF748; KEGG: rso:RSc0896 putative transmembrane protein; hypothetical protein complement(807802..811584) Ralstonia pickettii 12J 6288743 YP_001898350.1 CDS Rpic_0767 NC_010682.1 811703 812392 R KEGG: rso:RSc0897 probable hydrolase protein; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase complement(811703..812392) Ralstonia pickettii 12J 6288744 YP_001898351.1 CDS Rpic_0768 NC_010682.1 812389 813120 R Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase complement(812389..813120) Ralstonia pickettii 12J 6288745 YP_001898352.1 CDS Rpic_0769 NC_010682.1 813266 813757 D PFAM: 17 kDa surface antigen; KEGG: rso:RSc0899 probable outer membrane lipoprotein transmembrane; 17 kDa surface antigen 813266..813757 Ralstonia pickettii 12J 6288746 YP_001898353.1 CDS Rpic_0770 NC_010682.1 813941 814597 R PFAM: OmpA/MotB domain protein; KEGG: rso:RSc0900 probable signal peptide protein; OmpA/MotB domain-containing protein complement(813941..814597) Ralstonia pickettii 12J 6287959 YP_001898354.1 CDS Rpic_0771 NC_010682.1 815029 817698 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 815029..817698 Ralstonia pickettii 12J 6287960 YP_001898355.1 CDS Rpic_0772 NC_010682.1 817827 818387 D KEGG: rso:RSc0902 probable signal peptide protein; putative signal peptide protein 817827..818387 Ralstonia pickettii 12J 6287961 YP_001898356.1 CDS Rpic_0773 NC_010682.1 818501 819637 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 818501..819637 Ralstonia pickettii 12J 6287962 YP_001898357.1 CDS Rpic_0774 NC_010682.1 819725 820840 D TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: rso:RSc0904 probable bifunctional protein: chorismate mutase and prephenate dehydratase; chorismate mutase 819725..820840 Ralstonia pickettii 12J 6286918 YP_001898358.1 CDS Rpic_0775 NC_010682.1 820893 822017 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 820893..822017 Ralstonia pickettii 12J 6286919 YP_001898359.1 CDS Rpic_0776 NC_010682.1 822115 823023 D PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; KEGG: rso:RSc0906 putative prephenate dehydrogenase oxidoreductase protein; prephenate dehydrogenase 822115..823023 Ralstonia pickettii 12J 6286920 YP_001898360.1 CDS Rpic_0777 NC_010682.1 823050 824354 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 823050..824354 Ralstonia pickettii 12J 6286921 YP_001898361.1 CDS cmk NC_010682.1 824382 825077 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 824382..825077 Ralstonia pickettii 12J 6286817 YP_001898362.1 CDS rpsA NC_010682.1 825213 826901 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 825213..826901 Ralstonia pickettii 12J 6286818 YP_001898363.1 CDS ihfB NC_010682.1 826947 827375 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 826947..827375 Ralstonia pickettii 12J 6286819 YP_001898364.1 CDS Rpic_0781 NC_010682.1 827558 827881 D KEGG: rso:RSc0911 probable transmembrane protein; hypothetical protein 827558..827881 Ralstonia pickettii 12J 6286820 YP_001898365.1 CDS Rpic_0782 NC_010682.1 827885 829159 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: rso:RSc0912 hypothetical protein; hypothetical protein 827885..829159 Ralstonia pickettii 12J 6286835 YP_001898366.1 CDS Rpic_0783 NC_010682.1 829226 830590 D KEGG: rso:RSc0913 probable UDP-glucose 6-dehydrogenase (UDG) oxidoreductase protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; Ketopantoate reductase ApbA/PanE domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 829226..830590 Ralstonia pickettii 12J 6286836 YP_001898367.1 CDS Rpic_0784 NC_010682.1 830627 831559 D TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: rso:RSc0914 probable ADP-heptose synthase protein; bifunctional protein RfaE 830627..831559 Ralstonia pickettii 12J 6286837 YP_001898368.1 CDS Rpic_0785 NC_010682.1 831578 832573 D TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rso:RSc0915 probable ADP-L-glycero-D-manno-heptose-6-epimerase protein; ADP-L-glycero-D-manno-heptose-6-epimerase 831578..832573 Ralstonia pickettii 12J 6286838 YP_001898369.1 CDS Rpic_0786 NC_010682.1 832711 833034 D KEGG: rso:RSc0916 putative ComEA-related signal peptide protein; putative ComEA-related signal peptide protein 832711..833034 Ralstonia pickettii 12J 6286486 YP_001898370.1 CDS cysM NC_010682.1 833147 834049 D catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 833147..834049 Ralstonia pickettii 12J 6286487 YP_001898371.1 CDS Rpic_0788 NC_010682.1 834117 835241 R TIGRFAM: lytic murein transglycosylase B; KEGG: rso:RSc0918 putative membrane-bound lytic murein transglycosylase B protein; lytic murein transglycosylase B complement(834117..835241) Ralstonia pickettii 12J 6286488 YP_001898372.1 CDS Rpic_0789 NC_010682.1 835373 836296 D PFAM: histone deacetylase superfamily; KEGG: rso:RSc0919 hypothetical protein; histone deacetylase superfamily protein 835373..836296 Ralstonia pickettii 12J 6286489 YP_001898373.1 CDS metN NC_010682.1 836460 837509 D part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 836460..837509 Ralstonia pickettii 12J 6288198 YP_001898374.1 CDS Rpic_0791 NC_010682.1 837499 838152 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc0921 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 837499..838152 Ralstonia pickettii 12J 6288199 YP_001898375.1 CDS Rpic_0792 NC_010682.1 838186 838986 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rso:RSc0922 probable signal peptide protein; lipoprotein 838186..838986 Ralstonia pickettii 12J 6288200 YP_001898376.1 CDS Rpic_0793 NC_010682.1 839177 839926 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rso:RSc0923 probable electron transfer flavoprotein (beta-subunit); electron transfer flavoprotein alpha/beta-subunit 839177..839926 Ralstonia pickettii 12J 6288201 YP_001898377.1 CDS Rpic_0794 NC_010682.1 839978 840913 D PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: rso:RSc0924 probable electron transfer flavoprotein (alpha-subunit); electron transfer flavoprotein subunit alpha 839978..840913 Ralstonia pickettii 12J 6288747 YP_001898378.1 CDS Rpic_0795 NC_010682.1 841082 842866 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc0925 putative acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 841082..842866 Ralstonia pickettii 12J 6288748 YP_001898379.1 CDS Rpic_0796 NC_010682.1 842935 844224 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(842935..844224) Ralstonia pickettii 12J 6288749 YP_001898380.1 CDS Rpic_0797 NC_010682.1 844347 844844 D PFAM: regulatory protein AsnC/Lrp family; KEGG: rso:RSc0927 probable leucine-responsive regulatory DNA-binding transcription regulator protein; AsnC family transcriptional regulator 844347..844844 Ralstonia pickettii 12J 6288750 YP_001898381.1 CDS Rpic_0798 NC_010682.1 844909 846528 D KEGG: vei:Veis_2978 alkaline phosphatase; alkaline phosphatase 844909..846528 Ralstonia pickettii 12J 6286444 YP_001898382.1 CDS Rpic_0799 NC_010682.1 846611 847735 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rso:RSc0928 hypothetical protein; radical SAM protein 846611..847735 Ralstonia pickettii 12J 6286445 YP_001898383.1 CDS Rpic_0800 NC_010682.1 847736 848191 R KEGG: rso:RSc0929 probable transmembrane protein; hypothetical protein complement(847736..848191) Ralstonia pickettii 12J 6286446 YP_001898384.1 CDS Rpic_0801 NC_010682.1 848382 848555 R KEGG: rso:RSc0930 probable transmembrane protein; hypothetical protein complement(848382..848555) Ralstonia pickettii 12J 6286447 YP_001898385.1 CDS Rpic_0802 NC_010682.1 848680 849069 R KEGG: rso:RSc0931 probable signal peptide protein; putative signal peptide protein complement(848680..849069) Ralstonia pickettii 12J 6287995 YP_001898386.1 CDS rpsP NC_010682.1 850482 850736 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 850482..850736 Ralstonia pickettii 12J 6287997 YP_001898387.1 CDS rimM NC_010682.1 850870 851424 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 850870..851424 Ralstonia pickettii 12J 6287998 YP_001898388.1 CDS trmD NC_010682.1 851448 852236 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 851448..852236 Ralstonia pickettii 12J 6288469 YP_001898389.1 CDS rplS NC_010682.1 852310 852696 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 852310..852696 Ralstonia pickettii 12J 6288470 YP_001898390.1 CDS Rpic_0808 NC_010682.1 852803 853507 D PFAM: NUDIX hydrolase; KEGG: rso:RSc0937 hypothetical protein; NUDIX hydrolase 852803..853507 Ralstonia pickettii 12J 6288471 YP_001898391.1 CDS Rpic_0809 NC_010682.1 853615 854556 D PFAM: cobalamin biosynthesis protein CbiB; KEGG: rso:RSc0938 adenosylcobinamide-phosphate synthase; CobD/CbiB family protein 853615..854556 Ralstonia pickettii 12J 6288472 YP_001898392.1 CDS Rpic_0810 NC_010682.1 854589 854903 R KEGG: rso:RSc0939 hypothetical protein; hypothetical protein complement(854589..854903) Ralstonia pickettii 12J 6289535 YP_001898393.1 CDS Rpic_0811 NC_010682.1 854934 855881 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(854934..855881) Ralstonia pickettii 12J 6289536 YP_001898394.1 CDS Rpic_0812 NC_010682.1 855878 857137 R PFAM: peptidase M48 Ste24p; KEGG: rso:RSc0941 probable integral membrane protease transmembrane protein; Ste24 endopeptidase complement(855878..857137) Ralstonia pickettii 12J 6289537 YP_001898395.1 CDS Rpic_0813 NC_010682.1 857202 857861 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 857202..857861 Ralstonia pickettii 12J 6289538 YP_001898396.1 CDS mogA NC_010682.1 857869 858516 R forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA complement(857869..858516) Ralstonia pickettii 12J 6287161 YP_001898397.1 CDS Rpic_0815 NC_010682.1 858513 859139 R PFAM: protein of unknown function DUF615; KEGG: rso:RSc0944 hypothetical protein; hypothetical protein complement(858513..859139) Ralstonia pickettii 12J 6287162 YP_001898398.1 CDS Rpic_0816 NC_010682.1 859213 860586 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: rso:RSc0945 putative PmbA protein (TldE protein); peptidase U62 modulator of DNA gyrase 859213..860586 Ralstonia pickettii 12J 6287163 YP_001898399.1 CDS Rpic_0817 NC_010682.1 860651 861154 R PFAM: dihydrofolate reductase region; KEGG: rso:RSc0946 probable dihydrofolate reductase oxidoreductase protein; Dihydrofolate reductase complement(860651..861154) Ralstonia pickettii 12J 6287164 YP_001898400.1 CDS thyA NC_010682.1 861159 861953 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(861159..861953) Ralstonia pickettii 12J 6286502 YP_001898401.1 CDS Rpic_0819 NC_010682.1 862169 863170 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rso:RSc0948 hypothetical protein; hypothetical protein 862169..863170 Ralstonia pickettii 12J 6286503 YP_001898402.1 CDS Rpic_0820 NC_010682.1 863167 863859 R PFAM: Integral membrane protein TerC; KEGG: rso:RSc0949 probable transmembrane protein; integral membrane protein TerC complement(863167..863859) Ralstonia pickettii 12J 6286504 YP_001898403.1 CDS Rpic_0821 NC_010682.1 864301 865422 D KEGG: rso:RSc0950 hypothetical protein; hypothetical protein 864301..865422 Ralstonia pickettii 12J 6286505 YP_001898404.1 CDS Rpic_0822 NC_010682.1 865490 866788 D PFAM: protein of unknown function DUF323; KEGG: rso:RSc0951 hypothetical protein; hypothetical protein 865490..866788 Ralstonia pickettii 12J 6287496 YP_001898405.1 CDS Rpic_0823 NC_010682.1 866928 868811 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rso:RSc0952 putative ATP-dependent RNA helicase protein; DEAD/DEAH box helicase complement(866928..868811) Ralstonia pickettii 12J 6287497 YP_001898406.1 CDS Rpic_0824 NC_010682.1 869311 869499 D KEGG: rso:RSc0953 probable transmembrane protein; hypothetical protein 869311..869499 Ralstonia pickettii 12J 6287498 YP_001898407.1 CDS Rpic_0825 NC_010682.1 870000 870215 D KEGG: rso:RSc0971 hypothetical protein; hypothetical protein 870000..870215 Ralstonia pickettii 12J 6286743 YP_001898408.1 CDS Rpic_0826 NC_010682.1 870296 871204 R PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: rso:RSc0973 probable amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein complement(870296..871204) Ralstonia pickettii 12J 6286744 YP_001898409.1 CDS Rpic_0827 NC_010682.1 871677 871883 R KEGG: rso:RSc0974 probable transmembrane protein; hypothetical protein complement(871677..871883) Ralstonia pickettii 12J 6286745 YP_001898410.1 CDS Rpic_0828 NC_010682.1 872058 873968 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0975 probable ATP-binding ABC transporter protein; ABC transporter-like protein 872058..873968 Ralstonia pickettii 12J 6289025 YP_001898411.1 CDS Rpic_0829 NC_010682.1 874141 876126 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 874141..876126 Ralstonia pickettii 12J 6289026 YP_001898412.1 CDS Rpic_0830 NC_010682.1 876143 877033 D PFAM: Lytic transglycosylase catalytic; Transglycosylase domain protein; KEGG: rso:RSc0977 putative transglycosylase signal peptide protein; lytic transglycosylase catalytic subunit 876143..877033 Ralstonia pickettii 12J 6289027 YP_001898413.1 CDS Rpic_0831 NC_010682.1 877083 879425 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 877083..879425 Ralstonia pickettii 12J 6289028 YP_001898414.1 CDS Rpic_0832 NC_010682.1 879430 880008 D PFAM: Chromate transporter; KEGG: rso:RSc0979 probable transmembrane protein; chromate transporter 879430..880008 Ralstonia pickettii 12J 6287237 YP_001898415.1 CDS Rpic_0833 NC_010682.1 880005 880535 D PFAM: Chromate transporter; KEGG: rso:RSc0980 probable transmembrane protein; chromate transporter 880005..880535 Ralstonia pickettii 12J 6287238 YP_001898416.1 CDS Rpic_0834 NC_010682.1 880774 882156 D PFAM: amino acid permease-associated region; KEGG: rme:Rmet_5046 amino acid permease-associated region; amino acid permease-associated protein 880774..882156 Ralstonia pickettii 12J 6287239 YP_001898417.1 CDS Rpic_0835 NC_010682.1 882201 883520 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reh:H16_A0694 MFS transporter, MHS family; major facilitator superfamily protein 882201..883520 Ralstonia pickettii 12J 6287240 YP_001898418.1 CDS Rpic_0836 NC_010682.1 883524 885356 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A2666 ABC-type transporter, ATPase and permease components: LipidE family; ABC transporter-like protein complement(883524..885356) Ralstonia pickettii 12J 6289412 YP_001898419.1 CDS Rpic_0837 NC_010682.1 885894 887570 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: rso:RSc0981 putative L-lactate permease transmembrane protein; L-lactate transport complement(885894..887570) Ralstonia pickettii 12J 6289413 YP_001898420.1 CDS Rpic_0838 NC_010682.1 887832 889835 D PFAM: Patatin; surface antigen variable number repeat protein; KEGG: rme:Rmet_0605 patatin; patatin 887832..889835 Ralstonia pickettii 12J 6289414 YP_001898421.1 CDS Rpic_0839 NC_010682.1 889798 890604 D PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4; transposase IS4 family protein 889798..890604 Ralstonia pickettii 12J 6289415 YP_001898422.1 CDS Rpic_0840 NC_010682.1 890647 891054 D KEGG: rme:Rmet_0605 patatin; patatin 890647..891054 Ralstonia pickettii 12J 6288659 YP_001898423.1 CDS Rpic_0841 NC_010682.1 891225 892406 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_A4767 periplasmic multidrug efflux lipoprotein precursor; RND family efflux transporter MFP subunit 891225..892406 Ralstonia pickettii 12J 6288660 YP_001898424.1 CDS Rpic_0842 NC_010682.1 892409 895564 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pae:PA2018 multidrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 892409..895564 Ralstonia pickettii 12J 6288661 YP_001898425.1 CDS Rpic_0843 NC_010682.1 895577 896401 R KEGG: bps:BPSS0716 hypothetical protein; hypothetical protein complement(895577..896401) Ralstonia pickettii 12J 6288662 YP_001898426.1 CDS Rpic_0844 NC_010682.1 896398 897684 R PFAM: MASE1 domain protein; PAS fold-3 domain protein; KEGG: rso:RSc0982 probable transmembrane protein; putative PAS/PAC sensor protein complement(896398..897684) Ralstonia pickettii 12J 6286902 YP_001898427.1 CDS Rpic_0845 NC_010682.1 897774 898415 R PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0984 probable GST-related protein; glutathione S-transferase domain-containing protein complement(897774..898415) Ralstonia pickettii 12J 6286903 YP_001898428.1 CDS Rpic_0846 NC_010682.1 898463 899653 R PFAM: aminotransferase class I and II; KEGG: rso:RSc0985 probable aminotransferase protein; GntR family transcriptional regulator complement(898463..899653) Ralstonia pickettii 12J 6286904 YP_001898429.1 CDS Rpic_0847 NC_010682.1 899785 900255 R PFAM: Endoribonuclease L-PSP; KEGG: rso:RSc0986 hypothetical protein; endoribonuclease L-PSP complement(899785..900255) Ralstonia pickettii 12J 6286905 YP_001898430.1 CDS Rpic_0848 NC_010682.1 900301 901239 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0987 probable transmembrane protein; hypothetical protein complement(900301..901239) Ralstonia pickettii 12J 6289632 YP_001898431.1 CDS Rpic_0849 NC_010682.1 901249 901968 R PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: rso:RSc0988 probable alanyl-tRNA synthetase related protein (fragment); threonyl/alanyl tRNA synthetase SAD complement(901249..901968) Ralstonia pickettii 12J 6289633 YP_001898432.1 CDS Rpic_0850 NC_010682.1 902100 903578 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rso:RSc0989 putative transcription regulator protein; GntR family transcriptional regulator 902100..903578 Ralstonia pickettii 12J 6289634 YP_001898433.1 CDS Rpic_0851 NC_010682.1 903670 905601 D molecular chaperone; heat shock protein 90 903670..905601 Ralstonia pickettii 12J 6289635 YP_001898434.1 CDS Rpic_0852 NC_010682.1 905610 906113 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: reh:H16_A2653 G:T/U mismatch-specific DNA glycosylase; uracil-DNA glycosylase 905610..906113 Ralstonia pickettii 12J 6289479 YP_001898435.1 CDS Rpic_0853 NC_010682.1 906253 906675 R KEGG: mca:MCA1262 hypothetical protein; hypothetical protein complement(906253..906675) Ralstonia pickettii 12J 6289480 YP_001898436.1 CDS Rpic_0854 NC_010682.1 906745 907500 R PFAM: extracellular solute-binding protein family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein; family 3 extracellular solute-binding protein complement(906745..907500) Ralstonia pickettii 12J 6289481 YP_001898437.1 CDS Rpic_0855 NC_010682.1 908155 909138 D PFAM: beta-lactamase domain protein; KEGG: pat:Patl_0876 beta-lactamase-like; beta-lactamase domain-containing protein 908155..909138 Ralstonia pickettii 12J 6289482 YP_001898438.1 CDS Rpic_0856 NC_010682.1 909221 909634 D KEGG: reh:H16_A2653 G:T/U mismatch-specific DNA glycosylase; G:T/U mismatch-specific DNA glycosylase 909221..909634 Ralstonia pickettii 12J 6286456 YP_001898439.1 CDS Rpic_0857 NC_010682.1 909713 910444 R KEGG: reh:H16_A2651 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein complement(909713..910444) Ralstonia pickettii 12J 6286457 YP_001898440.1 CDS Rpic_0858 NC_010682.1 910878 911387 D KEGG: rso:RS02104 hypothetical protein; hypothetical protein 910878..911387 Ralstonia pickettii 12J 6286458 YP_001898441.1 CDS Rpic_0859 NC_010682.1 911564 912322 D PFAM: Tetratricopeptide TPR_4; KEGG: rso:RSc0994 probable transmembrane protein; hypothetical protein 911564..912322 Ralstonia pickettii 12J 6286459 YP_001898442.1 CDS Rpic_0860 NC_010682.1 912331 913206 D KEGG: rso:RSc0995 hypothetical protein; hypothetical protein 912331..913206 Ralstonia pickettii 12J 6289571 YP_001898443.1 CDS Rpic_0861 NC_010682.1 913277 913675 R KEGG: reu:Reut_A2665 hypothetical protein; hypothetical protein complement(913277..913675) Ralstonia pickettii 12J 6289572 YP_001898444.1 CDS Rpic_0862 NC_010682.1 913824 914999 R KEGG: rso:RSc0996 hypothetical protein; hypothetical protein complement(913824..914999) Ralstonia pickettii 12J 6289573 YP_001898445.1 CDS Rpic_0863 NC_010682.1 915015 915623 R KEGG: rso:RSc0997 hypothetical protein; hypothetical protein complement(915015..915623) Ralstonia pickettii 12J 6289574 YP_001898446.1 CDS Rpic_0864 NC_010682.1 915637 916530 R PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RSc0998 hypothetical protein; ATPase AAA complement(915637..916530) Ralstonia pickettii 12J 6287912 YP_001898447.1 CDS Rpic_0865 NC_010682.1 916831 917199 D PFAM: cytochrome c class I; KEGG: rso:RSc0999 putative periplasmic cytochrome type-C oxidoreductase signal peptide protein; cytochrome c class I 916831..917199 Ralstonia pickettii 12J 6287913 YP_001898448.1 CDS Rpic_0866 NC_010682.1 917211 917609 D KEGG: rso:RSc1000 putative periplasmic cytochrome type-C oxidoreductase signal peptide protein; putative periplasmic cytochrome type-C oxidoreductase signal peptide protein 917211..917609 Ralstonia pickettii 12J 6287914 YP_001898449.1 CDS Rpic_0867 NC_010682.1 917678 918112 R PFAM: Domain of unknown function DUF1841; KEGG: rso:RSc1001 hypothetical protein; hypothetical protein complement(917678..918112) Ralstonia pickettii 12J 6287915 YP_001898450.1 CDS Rpic_0868 NC_010682.1 918231 919166 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc1002 probable transmembrane protein; hypothetical protein 918231..919166 Ralstonia pickettii 12J 6286340 YP_001898451.1 CDS Rpic_0869 NC_010682.1 919239 921083 R PFAM: peptidase S10 serine carboxypeptidase; KEGG: bur:Bcep18194_A3933 carboxypeptidase C (cathepsin A)-like; peptidase S10 serine carboxypeptidase complement(919239..921083) Ralstonia pickettii 12J 6286341 YP_001898452.1 CDS Rpic_0870 NC_010682.1 921649 922236 D PFAM: nitroreductase; KEGG: rso:RSc1004 hypothetical protein; hypothetical protein 921649..922236 Ralstonia pickettii 12J 6286342 YP_001898453.1 CDS Rpic_0871 NC_010682.1 922297 922941 R KEGG: rso:RSc1005 probable endonuclease III protein; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; endonuclease III complement(922297..922941) Ralstonia pickettii 12J 6286343 YP_001898454.1 CDS Rpic_0872 NC_010682.1 922956 923786 R Involved in the electron transport chain; ferredoxin complement(922956..923786) Ralstonia pickettii 12J 6286934 YP_001898455.1 CDS Rpic_0873 NC_010682.1 923927 924622 D PFAM: regulatory protein TetR; KEGG: rso:RSc1007 probable transcription regulator protein; TetR family transcriptional regulator 923927..924622 Ralstonia pickettii 12J 6286935 YP_001898456.1 CDS Rpic_0874 NC_010682.1 924692 925963 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: rso:RSc1008 probable poly[D(-)-3-hydroxybutyrate] depolymerase protein; polyhydroxyalkanoate depolymerase complement(924692..925963) Ralstonia pickettii 12J 6286936 YP_001898457.1 CDS Rpic_0875 NC_010682.1 926170 927366 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(926170..927366) Ralstonia pickettii 12J 6286937 YP_001898458.1 CDS Rpic_0876 NC_010682.1 927703 929793 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 927703..929793 Ralstonia pickettii 12J 6286211 YP_001898459.1 CDS Rpic_0877 NC_010682.1 929968 932052 D KEGG: rso:RSc1012 putative site-specific recombinase transmembrane protein; putative site-specific recombinase transmembrane protein 929968..932052 Ralstonia pickettii 12J 6286212 YP_001898460.1 CDS Rpic_0878 NC_010682.1 932049 933014 R TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: rso:RSc1013 putative ribokinase protein; ribokinase complement(932049..933014) Ralstonia pickettii 12J 6286213 YP_001898461.1 CDS Rpic_0879 NC_010682.1 933052 934092 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1014 probable transcriptional regulatory DNA-binding repressor transcription regulator protein; LacI family transcriptional regulator complement(933052..934092) Ralstonia pickettii 12J 6286214 YP_001898462.1 CDS Rpic_0880 NC_010682.1 934111 935118 R PFAM: inner-membrane translocator; KEGG: rso:RSc1015 probable transmembrane ABC transporter protein; monosaccharide-transporting ATPase complement(934111..935118) Ralstonia pickettii 12J 6289838 YP_001898463.1 CDS Rpic_0881 NC_010682.1 935108 936688 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1016 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(935108..936688) Ralstonia pickettii 12J 6289839 YP_001898464.1 CDS Rpic_0882 NC_010682.1 936718 937677 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1017 probable sugar-binding periplasmic (PBP) ABC transporter protein; periplasmic binding protein/LacI transcriptional regulator complement(936718..937677) Ralstonia pickettii 12J 6289840 YP_001898465.1 CDS Rpic_0883 NC_010682.1 938101 938694 D TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: rso:RSc1018 hypothetical protein; BadM/Rrf2 family transcriptional regulator 938101..938694 Ralstonia pickettii 12J 6289841 YP_001898466.1 CDS Rpic_0884 NC_010682.1 938768 939985 D TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rso:RSc1019 probable pyridoxal-phosphate-dependent aminotransferase (NifS protein); cysteine desulfurase IscS 938768..939985 Ralstonia pickettii 12J 6289061 YP_001898467.1 CDS Rpic_0885 NC_010682.1 940045 940446 D TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: rso:RSc1020 scaffold protein; scaffold protein 940045..940446 Ralstonia pickettii 12J 6289062 YP_001898468.1 CDS Rpic_0886 NC_010682.1 940473 940793 D TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rso:RSc1021 hypothetical protein; iron-sulfur cluster assembly protein IscA 940473..940793 Ralstonia pickettii 12J 6289063 YP_001898469.1 CDS Rpic_0887 NC_010682.1 940804 941004 D KEGG: rso:RSc1022 hypothetical protein; hypothetical protein 940804..941004 Ralstonia pickettii 12J 6289064 YP_001898470.1 CDS hscB NC_010682.1 941049 941588 D J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 941049..941588 Ralstonia pickettii 12J 6289320 YP_001898471.1 CDS hscA NC_010682.1 941658 943523 D involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 941658..943523 Ralstonia pickettii 12J 6289321 YP_001898472.1 CDS Rpic_0890 NC_010682.1 943570 943908 D TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: rso:RSc1025 probable ferredoxin [2Fe-2S] protein; ferredoxin, 2Fe-2S type, ISC system 943570..943908 Ralstonia pickettii 12J 6289322 YP_001898473.1 CDS Rpic_0891 NC_010682.1 943940 944134 D TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: rso:RSc1026 hypothetical protein; FeS assembly protein IscX 943940..944134 Ralstonia pickettii 12J 6289323 YP_001898474.1 CDS Rpic_0892 NC_010682.1 944214 944957 R PFAM: 17 kDa surface antigen; KEGG: rso:RSc1027 probable transmembrane protein; 17 kDa surface antigen complement(944214..944957) Ralstonia pickettii 12J 6288370 YP_001898475.1 CDS lysS NC_010682.1 945219 946763 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(945219..946763) Ralstonia pickettii 12J 6288371 YP_001898476.1 CDS Rpic_0894 NC_010682.1 946788 947528 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc1029 short chain dehydrogenase; short chain dehydrogenase complement(946788..947528) Ralstonia pickettii 12J 6288372 YP_001898477.1 CDS Rpic_0895 NC_010682.1 947554 948658 R KEGG: bpm:BURPS1710b_3602 hypothetical protein; hypothetical protein complement(join(947554..948576,948578..948658)) Ralstonia pickettii 12J 6288373 YP_001898478.1 CDS Rpic_0896 NC_010682.1 948839 950008 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 948839..950008 Ralstonia pickettii 12J 6287448 YP_001898479.1 CDS Rpic_0897 NC_010682.1 950098 950817 D PFAM: protein of unknown function DUF162; KEGG: rso:RSc1032 putative transmembrane protein; hypothetical protein 950098..950817 Ralstonia pickettii 12J 6287449 YP_001898480.1 CDS Rpic_0898 NC_010682.1 950957 952366 D KEGG: rso:RSc1033 probable transmembrane protein; hypothetical protein 950957..952366 Ralstonia pickettii 12J 6287450 YP_001898481.1 CDS Rpic_0899 NC_010682.1 952386 953387 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rso:RSc1034 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 952386..953387 Ralstonia pickettii 12J 6287451 YP_001898482.1 CDS Rpic_0900 NC_010682.1 953400 954872 D PFAM: protein of unknown function DUF195; KEGG: rso:RSc1035 hypothetical protein; hypothetical protein 953400..954872 Ralstonia pickettii 12J 6288951 YP_001898483.1 CDS Rpic_0901 NC_010682.1 954948 955226 R KEGG: rso:RSc1036 probable transmembrane protein; hypothetical protein complement(954948..955226) Ralstonia pickettii 12J 6288952 YP_001898484.1 CDS Rpic_0902 NC_010682.1 955378 956658 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: rso:RSc1037 probable molybdopterin biosynthesis MoeA protein; molybdenum cofactor synthesis domain-containing protein complement(955378..956658) Ralstonia pickettii 12J 6288953 YP_001898485.1 CDS mobA NC_010682.1 956691 957305 R in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(956691..957305) Ralstonia pickettii 12J 6288954 YP_001898486.1 CDS moaA NC_010682.1 957326 958447 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(957326..958447) Ralstonia pickettii 12J 6286239 YP_001898487.1 CDS Rpic_0905 NC_010682.1 958631 961666 R TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: rso:RSc1040 probable ribonuclease E (RNase E) protein; Rne/Rng family ribonuclease complement(958631..961666) Ralstonia pickettii 12J 6286240 YP_001898488.1 CDS Rpic_0906 NC_010682.1 962408 963442 D KEGG: rso:RSc1041 probable ribosomal large subunit pseudouridine synthase C protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase 962408..963442 Ralstonia pickettii 12J 6286241 YP_001898489.1 CDS Rpic_0907 NC_010682.1 963423 964082 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc1042 putative phosphoglycolate phosphatase protein; HAD-superfamily hydrolase 963423..964082 Ralstonia pickettii 12J 6286242 YP_001898490.1 CDS Rpic_0908 NC_010682.1 964084 964476 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: rso:RSc1043 hypothetical protein; Rieske (2Fe-2S) domain-containing protein 964084..964476 Ralstonia pickettii 12J 6288719 YP_001898491.1 CDS Rpic_0909 NC_010682.1 964515 965609 D PFAM: peptidase S49; KEGG: rso:RSc1044 putative protease transmembrane protein; peptidase S49 964515..965609 Ralstonia pickettii 12J 6288720 YP_001898492.1 CDS Rpic_0910 NC_010682.1 965626 966357 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rso:RSc1045 probable transmembrane protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase complement(965626..966357) Ralstonia pickettii 12J 6288721 YP_001898493.1 CDS Rpic_0911 NC_010682.1 966361 966957 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(966361..966957) Ralstonia pickettii 12J 6288722 YP_001898494.1 CDS Rpic_0912 NC_010682.1 967151 967687 D PFAM: protein of unknown function DUF177; KEGG: rso:RSc1047 hypothetical protein; hypothetical protein 967151..967687 Ralstonia pickettii 12J 6288545 YP_001898495.1 CDS rpmF NC_010682.1 967803 967982 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 967803..967982 Ralstonia pickettii 12J 6288546 YP_001898496.1 CDS Rpic_0914 NC_010682.1 968173 969234 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 968173..969234 Ralstonia pickettii 12J 6288547 YP_001898497.1 CDS Rpic_0915 NC_010682.1 969272 970252 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 969272..970252 Ralstonia pickettii 12J 6288548 YP_001898498.1 CDS Rpic_0916 NC_010682.1 970285 971214 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: rso:RSc1051 acyl-carrier-protein S-malonyltransferase; cyclic nucleotide-binding protein 970285..971214 Ralstonia pickettii 12J 6287567 YP_001898499.1 CDS fabG NC_010682.1 971229 971978 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 971229..971978 Ralstonia pickettii 12J 6287568 YP_001898500.1 CDS acpP NC_010682.1 972165 972404 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 972165..972404 Ralstonia pickettii 12J 6287569 YP_001898501.1 CDS Rpic_0919 NC_010682.1 972518 973750 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 972518..973750 Ralstonia pickettii 12J 6287570 YP_001898502.1 CDS Rpic_0920 NC_010682.1 974351 974950 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 974351..974950 Ralstonia pickettii 12J 6288103 YP_001898503.1 CDS Rpic_0921 NC_010682.1 975057 975689 D PFAM: Anti sigma-E protein RseA family protein; KEGG: rso:RSc1056 putative transmembrane sigma-E factor negative regulatory transcription regulator protein; anti sigma-E protein, RseA 975057..975689 Ralstonia pickettii 12J 6288104 YP_001898504.1 CDS Rpic_0922 NC_010682.1 975701 976798 D KEGG: rso:RSc1057 putative sigma-E factor regulatory (negative regulator) transcription regulator protein; putative sigma E regulatory protein MucB/RseB 975701..976798 Ralstonia pickettii 12J 6288105 YP_001898505.1 CDS Rpic_0923 NC_010682.1 976882 978393 D KEGG: rso:RSc1058 probable periplasmic protease signal peptide protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 976882..978393 Ralstonia pickettii 12J 6288106 YP_001898506.1 CDS Rpic_0924 NC_010682.1 978390 978665 D PFAM: glutaredoxin 2; KEGG: rso:RSc1059 hypothetical protein; glutaredoxin 978390..978665 Ralstonia pickettii 12J 6289029 YP_001898507.1 CDS Rpic_0925 NC_010682.1 978883 980682 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 978883..980682 Ralstonia pickettii 12J 6289030 YP_001898508.1 CDS Rpic_0926 NC_010682.1 980713 981606 D KEGG: rso:RSc1061 probable signal peptidase I (SPase I) transmembrane protein; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 980713..981606 Ralstonia pickettii 12J 6289031 YP_001898509.1 CDS Rpic_0927 NC_010682.1 981669 982037 D KEGG: rso:RSc1062 probable transmembrane protein; hypothetical protein 981669..982037 Ralstonia pickettii 12J 6289032 YP_001898510.1 CDS rnc NC_010682.1 982039 982809 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 982039..982809 Ralstonia pickettii 12J 6289495 YP_001898511.1 CDS era NC_010682.1 982818 983756 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 982818..983756 Ralstonia pickettii 12J 6289496 YP_001898512.1 CDS recO NC_010682.1 983788 984609 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 983788..984609 Ralstonia pickettii 12J 6289497 YP_001898513.1 CDS Rpic_0931 NC_010682.1 984606 985397 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 984606..985397 Ralstonia pickettii 12J 6289498 YP_001898514.1 CDS acpS NC_010682.1 985394 985837 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 985394..985837 Ralstonia pickettii 12J 6288707 YP_001898515.1 CDS Rpic_0933 NC_010682.1 985834 986883 D hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 985834..986883 Ralstonia pickettii 12J 6288708 YP_001898516.1 CDS Rpic_0934 NC_010682.1 986959 987534 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(986959..987534) Ralstonia pickettii 12J 6288709 YP_001898517.1 CDS Rpic_0935 NC_010682.1 987651 988844 R KEGG: rso:RSc1070 hypothetical protein; hypothetical protein complement(987651..988844) Ralstonia pickettii 12J 6288710 YP_001898518.1 CDS uvrC NC_010682.1 988937 990910 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 988937..990910 Ralstonia pickettii 12J 6286266 YP_001898519.1 CDS Rpic_0937 NC_010682.1 990978 991553 D KEGG: rso:RSc1072 probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase transmembrane protein; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 990978..991553 Ralstonia pickettii 12J 6286267 YP_001898520.1 CDS Rpic_0938 NC_010682.1 992383 993441 D PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3830 major facilitator superfamily MFS_1; major facilitator superfamily protein 992383..993441 Ralstonia pickettii 12J 6286357 YP_001898521.1 CDS Rpic_0939 NC_010682.1 993930 994643 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc1073 probable two-component system response regulator transcription regulator protein; winged helix family two component transcriptional regulator 993930..994643 Ralstonia pickettii 12J 6288394 YP_001898522.1 CDS Rpic_0940 NC_010682.1 994627 996306 D PFAM: Peptidoglycan-binding LysM; KEGG: rso:RSc1074 probable signal peptide protein; peptidoglycan-binding LysM 994627..996306 Ralstonia pickettii 12J 6288395 YP_001898523.1 CDS Rpic_0941 NC_010682.1 996299 998632 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE2 domain protein; PAS fold-4 domain protein; KEGG: rso:RSc1075 probable two-component system sensor histidine kinase transcription regulator protein; multi-sensor signal transduction histidine kinase 996299..998632 Ralstonia pickettii 12J 6288396 YP_001898524.1 CDS Rpic_0942 NC_010682.1 998809 999009 D hypothetical protein 998809..999009 Ralstonia pickettii 12J 6288663 YP_001898525.1 CDS Rpic_0943 NC_010682.1 999044 999751 D PFAM: transcriptional regulator domain protein; KEGG: rso:RSc1076 probable two-component system response regulator transcription regulator protein; winged helix family two component transcriptional regulator 999044..999751 Ralstonia pickettii 12J 6288664 YP_001898526.1 CDS Rpic_0944 NC_010682.1 999779 1000030 D KEGG: rso:RSc1077 probable transmembrane protein; hypothetical protein 999779..1000030 Ralstonia pickettii 12J 6288665 YP_001898527.1 CDS Rpic_0945 NC_010682.1 1000337 1001092 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rso:RSc1078 probable transcriptional regulatory DNA-binding transcription regulator protein; GntR family transcriptional regulator complement(1000337..1001092) Ralstonia pickettii 12J 6288666 YP_001898528.1 CDS Rpic_0946 NC_010682.1 1001178 1002548 D KEGG: rso:RSc1079 probable glucarate dehydratase protein; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase 1001178..1002548 Ralstonia pickettii 12J 6289448 YP_001898529.1 CDS Rpic_0947 NC_010682.1 1002643 1003935 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1080 putative hexuronate transporter transmembrane protein; major facilitator superfamily protein 1002643..1003935 Ralstonia pickettii 12J 6289449 YP_001898530.1 CDS Rpic_0948 NC_010682.1 1003946 1006357 D PFAM: glycoside hydrolase family 31; KEGG: rso:RSc1081 probable glucosidase protein; glycoside hydrolase family protein 1003946..1006357 Ralstonia pickettii 12J 6289450 YP_001898531.1 CDS Rpic_0949 NC_010682.1 1006406 1007641 D PFAM: porin Gram-negative type; KEGG: rso:RSc1082 probable porin transmembrane protein; porin 1006406..1007641 Ralstonia pickettii 12J 6289451 YP_001898532.1 CDS Rpic_0950 NC_010682.1 1007641 1008576 D PFAM: Aldose 1-epimerase; KEGG: rso:RSc1083 hypothetical protein; aldose 1-epimerase 1007641..1008576 Ralstonia pickettii 12J 6289351 YP_001898533.1 CDS Rpic_0953 NC_010682.1 1009579 1010514 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1110 probable transcriptional regulatory DNA-binding transcription regulator protein; LysR family transcriptional regulator complement(1009579..1010514) Ralstonia pickettii 12J 6288351 YP_001898534.1 CDS Rpic_0954 NC_010682.1 1010607 1011710 D PFAM: conserved hypothetical protein; KEGG: rso:RSc1111 probable transmembrane protein; hypothetical protein 1010607..1011710 Ralstonia pickettii 12J 6288352 YP_001898535.1 CDS Rpic_0955 NC_010682.1 1011826 1012593 D PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rso:RSc1113 hypothetical protein; hypothetical protein 1011826..1012593 Ralstonia pickettii 12J 6288353 YP_001898536.1 CDS Rpic_0956 NC_010682.1 1012989 1013318 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RSc1114 probable ferredoxin protein; 4Fe-4S ferredoxin complement(1012989..1013318) Ralstonia pickettii 12J 6287008 YP_001898537.1 CDS Rpic_0957 NC_010682.1 1013360 1013461 R hypothetical protein complement(1013360..1013461) Ralstonia pickettii 12J 6286263 YP_001898538.1 CDS Rpic_0958 NC_010682.1 1013497 1015191 R TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rso:RSc1115 probable single-stranded-DNA-specific exonuclease protein; single-stranded-DNA-specific exonuclease RecJ complement(1013497..1015191) Ralstonia pickettii 12J 6286264 YP_001898539.1 CDS Rpic_0959 NC_010682.1 1015204 1016283 R KEGG: rso:RSc1116 hypothetical signal peptide protein; hypothetical protein complement(1015204..1016283) Ralstonia pickettii 12J 6286265 YP_001898540.1 CDS Rpic_0960 NC_010682.1 1016355 1017605 D TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rso:RSc1117 probable lipoprotein releasing system transmembrane; lipoprotein releasing system transmembrane protein LolC/E family 1016355..1017605 Ralstonia pickettii 12J 6289612 YP_001898541.1 CDS Rpic_0961 NC_010682.1 1017598 1018326 D KEGG: rso:RSc1118 probable lipoprotein releasing system ATP-binding ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein 1017598..1018326 Ralstonia pickettii 12J 6289613 YP_001898542.1 CDS Rpic_0962 NC_010682.1 1018411 1019223 D PFAM: TatD-related deoxyribonuclease; KEGG: rso:RSc1119 probable deoxyribonuclease protein; TatD-related deoxyribonuclease 1018411..1019223 Ralstonia pickettii 12J 6289614 YP_001898543.1 CDS Rpic_0963 NC_010682.1 1019233 1021755 D TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: rso:RSc1120 putative transporter DNA uptake transmembrane protein; DNA internalization-related competence protein ComEC/Rec2 1019233..1021755 Ralstonia pickettii 12J 6289615 YP_001898544.1 CDS Rpic_0964 NC_010682.1 1021861 1023345 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rso:RSc1121 hypothetical protein; hypothetical protein 1021861..1023345 Ralstonia pickettii 12J 6287456 YP_001898545.1 CDS Rpic_0965 NC_010682.1 1023420 1024370 D PFAM: protein of unknown function DUF403; KEGG: rso:RSc1122 hypothetical protein; hypothetical protein 1023420..1024370 Ralstonia pickettii 12J 6287457 YP_001898546.1 CDS Rpic_0966 NC_010682.1 1024429 1025274 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rso:RSc1123 hypothetical protein; transglutaminase domain-containing protein 1024429..1025274 Ralstonia pickettii 12J 6287458 YP_001898547.1 CDS Rpic_0967 NC_010682.1 1025357 1026259 D KEGG: rso:RSc1124 hypothetical protein; hypothetical protein 1025357..1026259 Ralstonia pickettii 12J 6287459 YP_001898548.1 CDS Rpic_0968 NC_010682.1 1026277 1027098 D KEGG: rso:RSc1125 putative hydrolase protein; putative hydrolase protein 1026277..1027098 Ralstonia pickettii 12J 6286621 YP_001898549.1 CDS pyrG NC_010682.1 1027190 1028851 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1027190..1028851 Ralstonia pickettii 12J 6286622 YP_001898550.1 CDS Rpic_0970 NC_010682.1 1028873 1029727 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1028873..1029727 Ralstonia pickettii 12J 6286623 YP_001898551.1 CDS Rpic_0971 NC_010682.1 1029820 1030110 D PFAM: protein of unknown function DUF1330; KEGG: rso:RSc1128 hypothetical protein; hypothetical protein 1029820..1030110 Ralstonia pickettii 12J 6286624 YP_001898552.1 CDS eno NC_010682.1 1030165 1031448 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1030165..1031448 Ralstonia pickettii 12J 6286797 YP_001898553.1 CDS ftsB NC_010682.1 1031540 1031875 D forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 1031540..1031875 Ralstonia pickettii 12J 6286798 YP_001898554.1 CDS Rpic_0974 NC_010682.1 1031933 1032346 R KEGG: rso:RSc1131 probable transmembrane protein; hypothetical protein complement(1031933..1032346) Ralstonia pickettii 12J 6286799 YP_001898555.1 CDS Rpic_0975 NC_010682.1 1032452 1033465 R PFAM: Hsp33 protein; KEGG: rso:RSc1132 putative redox regulated molecular chaperone heat-shock-like protein; Hsp33 protein complement(1032452..1033465) Ralstonia pickettii 12J 6286800 YP_001898556.1 CDS Rpic_0976 NC_010682.1 1033462 1033989 R PFAM: transferase hexapeptide repeat containing protein; KEGG: rso:RSc1133 hypothetical protein; transferase hexapeptide repeat containing protein complement(1033462..1033989) Ralstonia pickettii 12J 6286966 YP_001898557.1 CDS Rpic_0977 NC_010682.1 1034063 1034947 D PFAM: protein of unknown function DUF455; KEGG: rso:RSc1134 hypothetical protein; hypothetical protein 1034063..1034947 Ralstonia pickettii 12J 6286967 YP_001898558.1 CDS Rpic_0978 NC_010682.1 1035027 1035944 D PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc1135 putative hydrolase protein; alpha/beta hydrolase fold protein 1035027..1035944 Ralstonia pickettii 12J 6286968 YP_001898559.1 CDS Rpic_0979 NC_010682.1 1035953 1036342 R PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: rso:RSc1136 hypothetical protein; putative thiol-disulfide oxidoreductase DCC complement(1035953..1036342) Ralstonia pickettii 12J 6286969 YP_001898560.1 CDS Rpic_0980 NC_010682.1 1036339 1036884 R KEGG: rso:RSc1137 hypothetical protein; hypothetical protein complement(1036339..1036884) Ralstonia pickettii 12J 6286877 YP_001898561.1 CDS Rpic_0981 NC_010682.1 1036892 1037971 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc1139 probable thioredoxin reductase oxidoreductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1036892..1037971) Ralstonia pickettii 12J 6286878 YP_001898562.1 CDS Rpic_0982 NC_010682.1 1038122 1038982 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rso:RSc1140 hypothetical protein; PHP domain-containing protein 1038122..1038982 Ralstonia pickettii 12J 6286879 YP_001898563.1 CDS Rpic_0983 NC_010682.1 1038996 1039619 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: rso:RSc1141 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 1038996..1039619 Ralstonia pickettii 12J 6286880 YP_001898564.1 CDS Rpic_0984 NC_010682.1 1039686 1040351 D PFAM: peptidase M50; KEGG: reu:Reut_A1102 peptidase M50; peptidase M50 1039686..1040351 Ralstonia pickettii 12J 6286781 YP_001898565.1 CDS Rpic_0985 NC_010682.1 1040373 1041575 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1040373..1041575 Ralstonia pickettii 12J 6286782 YP_001898566.1 CDS Rpic_0986 NC_010682.1 1041586 1042152 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc1144 hypothetical protein; type 12 methyltransferase 1041586..1042152 Ralstonia pickettii 12J 6286783 YP_001898567.1 CDS Rpic_0987 NC_010682.1 1042271 1043155 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1042271..1043155 Ralstonia pickettii 12J 6286784 YP_001898568.1 CDS Rpic_0988 NC_010682.1 1043217 1044413 D PFAM: NlpBDapX family lipoprotein; KEGG: rso:RSc1146 probable transmembrane protein; NlpBDapX family lipoprotein 1043217..1044413 Ralstonia pickettii 12J 6287197 YP_001898569.1 CDS Rpic_0989 NC_010682.1 1044448 1045233 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc1147 hypothetical protein; beta-lactamase domain-containing protein 1044448..1045233 Ralstonia pickettii 12J 6287198 YP_001898570.1 CDS Rpic_0990 NC_010682.1 1045864 1046991 R PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: rso:RSc1148 hypothetical protein; cupin complement(1045864..1046991) Ralstonia pickettii 12J 6287199 YP_001898571.1 CDS Rpic_0991 NC_010682.1 1047105 1047629 D KEGG: rso:RSc1149 probable FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) protein; putative FKBP-type peptidyl-prolyl cis-trans isomerase protein 1047105..1047629 Ralstonia pickettii 12J 6287200 YP_001898572.1 CDS Rpic_0992 NC_010682.1 1047680 1048756 R KEGG: rso:RSc1150 probable transmembrane protein; hypothetical protein complement(1047680..1048756) Ralstonia pickettii 12J 6287844 YP_001898573.1 CDS Rpic_0993 NC_010682.1 1048762 1051410 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1048762..1051410) Ralstonia pickettii 12J 6287845 YP_001898574.1 CDS Rpic_0994 NC_010682.1 1051507 1052403 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1152 probable transcription regulator protein; LysR family transcriptional regulator complement(1051507..1052403) Ralstonia pickettii 12J 6287846 YP_001898575.1 CDS Rpic_0995 NC_010682.1 1052641 1054506 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: rso:RSc1155 probable methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer 1052641..1054506 Ralstonia pickettii 12J 6287847 YP_001898576.1 CDS Rpic_0996 NC_010682.1 1054582 1056387 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rso:RSc1156 probable methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer 1054582..1056387 Ralstonia pickettii 12J 6286366 YP_001898577.1 CDS Rpic_0997 NC_010682.1 1056400 1057104 R PFAM: 3-alpha domain protein; MOSC domain containing protein; KEGG: rso:RSc1157 hypothetical protein; MOSC domain-containing protein complement(1056400..1057104) Ralstonia pickettii 12J 6286367 YP_001898578.1 CDS Rpic_0998 NC_010682.1 1057101 1057805 R Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase complement(1057101..1057805) Ralstonia pickettii 12J 6286368 YP_001898579.1 CDS Rpic_0999 NC_010682.1 1058125 1058520 D KEGG: reh:H16_A3384 hypothetical membrane associated protein; hypothetical protein 1058125..1058520 Ralstonia pickettii 12J 6286369 YP_001898580.1 CDS Rpic_1000 NC_010682.1 1058517 1058975 D KEGG: reh:H16_A3383 hypothetical protein; hypothetical protein 1058517..1058975 Ralstonia pickettii 12J 6288214 YP_001898581.1 CDS Rpic_1001 NC_010682.1 1059044 1059856 R PFAM: inositol monophosphatase; KEGG: rso:RSc1160 probable inositol monophosphatase (extragenic suppressor protein); inositol-phosphate phosphatase complement(1059044..1059856) Ralstonia pickettii 12J 6288215 YP_001898582.1 CDS Rpic_1002 NC_010682.1 1060028 1060876 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rso:RSc1161 putative tRNA/rRNA methyltransferase protein; TrmH family RNA methyltransferase 1060028..1060876 Ralstonia pickettii 12J 6288216 YP_001898583.1 CDS Rpic_1003 NC_010682.1 1061025 1061771 D TIGRFAM: serine O-acetyltransferase; KEGG: rso:RSc1162 probable O-acetylserine synthase (serine acetyltransferase) protein; serine O-acetyltransferase 1061025..1061771 Ralstonia pickettii 12J 6288217 YP_001898584.1 CDS Rpic_1004 NC_010682.1 1061794 1062612 R catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase complement(1061794..1062612) Ralstonia pickettii 12J 6288083 YP_001898585.1 CDS Rpic_1005 NC_010682.1 1062609 1063115 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rso:RSc1164 probable peptidyl-prolyl cis-trans isomerase B (PPIase B) (rotamase B)(CYPB protein); cyclophilin type peptidyl-prolyl cis-trans isomerase complement(1062609..1063115) Ralstonia pickettii 12J 6288084 YP_001898586.1 CDS Rpic_1006 NC_010682.1 1063146 1063727 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rso:RSc1165 probable peptidyl-prolyl cis-trans isomerase A (PPIase A)(rotamase A)(CypH) signal peptide protein; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(1063146..1063727) Ralstonia pickettii 12J 6288085 YP_001898587.1 CDS Rpic_1007 NC_010682.1 1063780 1064430 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: rso:RSc1166 probable signal peptide protein; hypothetical protein complement(1063780..1064430) Ralstonia pickettii 12J 6288086 YP_001898588.1 CDS cysS NC_010682.1 1064684 1066075 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1064684..1066075 Ralstonia pickettii 12J 6288063 YP_001898589.1 CDS Rpic_1009 NC_010682.1 1066072 1066944 D PFAM: HhH-GPD family protein; KEGG: rso:RSc1168 hypothetical protein; HhH-GPD family protein 1066072..1066944 Ralstonia pickettii 12J 6288064 YP_001898590.1 CDS Rpic_1010 NC_010682.1 1067031 1067999 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1067031..1067999 Ralstonia pickettii 12J 6288065 YP_001898591.1 CDS Rpic_1011 NC_010682.1 1067968 1069386 D TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: rso:RSc1170 putative cell cycle protein; tRNA(Ile)-lysidine synthetase 1067968..1069386 Ralstonia pickettii 12J 6288066 YP_001898592.1 CDS Rpic_1012 NC_010682.1 1069483 1070733 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1069483..1070733 Ralstonia pickettii 12J 6286824 YP_001898593.1 CDS Rpic_1013 NC_010682.1 1071184 1071978 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase complement(1071184..1071978) Ralstonia pickettii 12J 6286826 YP_001898594.1 CDS Rpic_1014 NC_010682.1 1072289 1074175 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc1173 probable substrate-binding periplasmic (PBP) ABC transporter protein; family 5 extracellular solute-binding protein 1072289..1074175 Ralstonia pickettii 12J 6287288 YP_001898595.1 CDS Rpic_1015 NC_010682.1 1074192 1075244 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1174 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1074192..1075244 Ralstonia pickettii 12J 6287289 YP_001898596.1 CDS Rpic_1016 NC_010682.1 1075259 1076383 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1175 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1075259..1076383 Ralstonia pickettii 12J 6287290 YP_001898597.1 CDS Rpic_1017 NC_010682.1 1076380 1078035 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rso:RSc1176 probable ATP-binding ABC transporter protein; ABC transporter-like protein 1076380..1078035 Ralstonia pickettii 12J 6287291 YP_001898598.1 CDS Rpic_1018 NC_010682.1 1078277 1078924 D PFAM: NLP/P60 protein; KEGG: rso:RSc1177 putative transmembrane protein; NLP/P60 protein 1078277..1078924 Ralstonia pickettii 12J 6287339 YP_001898599.1 CDS Rpic_1019 NC_010682.1 1079047 1079445 D KEGG: pol:Bpro_1225 ISPsy11, transposase OrfA; ISPsy11, transposase OrfA 1079047..1079445 Ralstonia pickettii 12J 6287340 YP_001898600.1 CDS Rpic_1020 NC_010682.1 1079448 1080275 D PFAM: Integrase catalytic region; KEGG: pol:Bpro_3089 integrase, catalytic region; Integrase catalytic subunit 1079448..1080275 Ralstonia pickettii 12J 6287341 YP_001898601.1 CDS Rpic_1021 NC_010682.1 1080322 1081278 R PFAM: Patatin; KEGG: rso:RSc1178 probable lipoprotein transmembrane; patatin complement(1080322..1081278) Ralstonia pickettii 12J 6287342 YP_001898602.1 CDS gltX NC_010682.1 1081484 1082881 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1081484..1082881 Ralstonia pickettii 12J 6289456 YP_001898603.1 CDS Rpic_1023 NC_010682.1 1083524 1084870 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rso:RSc1180 probable inner membrane transmembrane protein; MATE efflux family protein complement(1083524..1084870) Ralstonia pickettii 12J 6286702 YP_001898604.1 CDS Rpic_1024 NC_010682.1 1084890 1086680 R KEGG: rso:RSc1181 probable inner membrane transmembrane protein; putative inner membrane transmembrane protein complement(1084890..1086680) Ralstonia pickettii 12J 6286510 YP_001898605.1 CDS rpmE2 NC_010682.1 1086863 1087123 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(1086863..1087123) Ralstonia pickettii 12J 6286511 YP_001898606.1 CDS Rpic_1026 NC_010682.1 1087327 1087884 R KEGG: rso:RSc1183 putative signal peptide protein; putative signal peptide protein complement(1087327..1087884) Ralstonia pickettii 12J 6286512 YP_001898607.1 CDS Rpic_1027 NC_010682.1 1087881 1088747 R PFAM: protein of unknown function DUF980; KEGG: rso:RSc1184 hypothetical protein; hypothetical protein complement(1087881..1088747) Ralstonia pickettii 12J 6286513 YP_001898608.1 CDS Rpic_1028 NC_010682.1 1088810 1089478 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rso:RSc1185 probable transcription regulator protein; two component LuxR family transcriptional regulator complement(1088810..1089478) Ralstonia pickettii 12J 6289155 YP_001898609.1 CDS Rpic_1029 NC_010682.1 1089855 1090496 D hypothetical protein 1089855..1090496 Ralstonia pickettii 12J 6289156 YP_001898610.1 CDS Rpic_1030 NC_010682.1 1090643 1092016 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: rso:RSc1186 putative sigma-54 interacting transcription regulator protein; Fis family sigma-54 specific transcriptional regulator complement(1090643..1092016) Ralstonia pickettii 12J 6289157 YP_001898611.1 CDS rho NC_010682.1 1092285 1093547 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(1092285..1093547) Ralstonia pickettii 12J 6289158 YP_001898612.1 CDS Rpic_1032 NC_010682.1 1093737 1094063 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rso:RSc1188 probable thioredoxin 1 (redox factor) protein; thioredoxin complement(1093737..1094063) Ralstonia pickettii 12J 6286589 YP_001898613.1 CDS Rpic_1033 NC_010682.1 1094281 1097136 D KEGG: rso:RSc1189 hypothetical protein; hypothetical protein 1094281..1097136 Ralstonia pickettii 12J 6286590 YP_001898614.1 CDS Rpic_1034 NC_010682.1 1097133 1100654 D PFAM: UvrD/REP helicase; KEGG: rso:RSc1190 hypothetical protein; UvrD/REP helicase 1097133..1100654 Ralstonia pickettii 12J 6286591 YP_001898615.1 CDS Rpic_1035 NC_010682.1 1100943 1103138 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1100943..1103138 Ralstonia pickettii 12J 6289208 YP_001898616.1 CDS Rpic_1036 NC_010682.1 1103224 1103571 D PFAM: conserved hypothetical protein; KEGG: rso:RSc1192 hypothetical protein; hypothetical protein 1103224..1103571 Ralstonia pickettii 12J 6289209 YP_001898617.1 CDS Rpic_1037 NC_010682.1 1103595 1103894 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: amr:AM1_3889 antibiotic biosynthesis monooxygenase family protein; antibiotic biosynthesis monooxygenase 1103595..1103894 Ralstonia pickettii 12J 6289210 YP_001898618.1 CDS recR NC_010682.1 1103894 1104514 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1103894..1104514 Ralstonia pickettii 12J 6287157 YP_001898619.1 CDS Rpic_1039 NC_010682.1 1104529 1105917 R PFAM: Carbohydrate-selective porin OprB; KEGG: rso:RSc1195 hypothetical protein; Carbohydrate-selective porin OprB complement(1104529..1105917) Ralstonia pickettii 12J 6287158 YP_001898620.1 CDS Rpic_1040 NC_010682.1 1106081 1106995 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1196 probable DNA-binding transcriptional regulatory transcription regulator protein; LysR family transcriptional regulator 1106081..1106995 Ralstonia pickettii 12J 6287159 YP_001898621.1 CDS Rpic_1041 NC_010682.1 1107018 1108226 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rso:RSc1197 hypothetical protein; formyl-CoA transferase 1107018..1108226 Ralstonia pickettii 12J 6287160 YP_001898622.1 CDS Rpic_1042 NC_010682.1 1108315 1109364 D PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc1198 probable signal peptide protein; NMT1/THI5 like domain-containing protein 1108315..1109364 Ralstonia pickettii 12J 6289579 YP_001898623.1 CDS Rpic_1043 NC_010682.1 1109429 1110241 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1199 probable ATP-binding ABC transporter protein; ABC transporter-like protein 1109429..1110241 Ralstonia pickettii 12J 6289580 YP_001898624.1 CDS Rpic_1044 NC_010682.1 1110265 1111056 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1200 probable transmembrane permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1110265..1111056 Ralstonia pickettii 12J 6289581 YP_001898625.1 CDS Rpic_1045 NC_010682.1 1111105 1111773 D PFAM: regulatory protein TetR; KEGG: rso:RSc1201 probable transcription regulator protein; TetR family transcriptional regulator 1111105..1111773 Ralstonia pickettii 12J 6289582 YP_001898626.1 CDS Rpic_1046 NC_010682.1 1111874 1112980 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rso:RSc1202 probable flavoprotein NADH-dependent oxidoreductase; NADH:flavin oxidoreductase 1111874..1112980 Ralstonia pickettii 12J 6287516 YP_001898627.1 CDS Rpic_1047 NC_010682.1 1113055 1114029 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc1203 probable oxidoreductase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(1113055..1114029) Ralstonia pickettii 12J 6287517 YP_001898628.1 CDS surE NC_010682.1 1114241 1114996 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1114241..1114996 Ralstonia pickettii 12J 6287518 YP_001898629.1 CDS Rpic_1049 NC_010682.1 1115012 1115956 D KEGG: rso:RSc1205 hypothetical protein; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1115012..1115956 Ralstonia pickettii 12J 6287519 YP_001898630.1 CDS Rpic_1050 NC_010682.1 1115958 1116785 D PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: rso:RSc1206 probable lipoprotein NlpD/LppB homolog; peptidase M23 1115958..1116785 Ralstonia pickettii 12J 6289096 YP_001898631.1 CDS Rpic_1051 NC_010682.1 1116794 1117930 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 1116794..1117930 Ralstonia pickettii 12J 6289097 YP_001898632.1 CDS Rpic_1052 NC_010682.1 1117962 1118825 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rso:RSc1208 hypothetical protein; endonuclease/exonuclease/phosphatase complement(1117962..1118825) Ralstonia pickettii 12J 6289098 YP_001898633.1 CDS rumA NC_010682.1 1118986 1120338 D in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 1118986..1120338 Ralstonia pickettii 12J 6289099 YP_001898634.1 CDS Rpic_1054 NC_010682.1 1120431 1121132 R PFAM: protein of unknown function UPF0005; KEGG: rso:RSc1210 hypothetical protein; hypothetical protein complement(1120431..1121132) Ralstonia pickettii 12J 6286053 YP_001898635.1 CDS ndk NC_010682.1 1121500 1121925 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1121500..1121925 Ralstonia pickettii 12J 6286054 YP_001898636.1 CDS Rpic_1056 NC_010682.1 1121969 1123120 D TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: rso:RSc1212 hypothetical protein; radical SAM enzyme, Cfr family 1121969..1123120 Ralstonia pickettii 12J 6286055 YP_001898637.1 CDS Rpic_1057 NC_010682.1 1123117 1123914 D KEGG: rso:RSc1213 putative type 4 fimbrial biogenesis protein; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 1123117..1123914 Ralstonia pickettii 12J 6286056 YP_001898638.1 CDS Rpic_1058 NC_010682.1 1123907 1124989 D SMART: helix-turn-helix domain protein; KEGG: rso:RSc1214 probable transmembrane protein; XRE family transcriptional regulator 1123907..1124989 Ralstonia pickettii 12J 6288150 YP_001898639.1 CDS ispG NC_010682.1 1125040 1126326 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1125040..1126326 Ralstonia pickettii 12J 6288151 YP_001898640.1 CDS hisS NC_010682.1 1126394 1127746 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1126394..1127746 Ralstonia pickettii 12J 6288152 YP_001898641.1 CDS Rpic_1061 NC_010682.1 1127813 1128448 D KEGG: rso:RSc1217 hypothetical protein; hypothetical protein 1127813..1128448 Ralstonia pickettii 12J 6288153 YP_001898642.1 CDS Rpic_1062 NC_010682.1 1128498 1129676 D TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: rso:RSc1218 probable lipoprotein transmembrane; outer membrane assembly lipoprotein YfgL 1128498..1129676 Ralstonia pickettii 12J 6288142 YP_001898643.1 CDS engA NC_010682.1 1129872 1131215 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1129872..1131215 Ralstonia pickettii 12J 6288143 YP_001898644.1 CDS hfq NC_010682.1 1131517 1131756 D Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1131517..1131756 Ralstonia pickettii 12J 6288144 YP_001898645.1 CDS Rpic_1065 NC_010682.1 1131829 1133082 D TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: rso:RSc1221 hypothetical protein; GTP-binding proten HflX 1131829..1133082 Ralstonia pickettii 12J 6288145 YP_001898646.1 CDS Rpic_1066 NC_010682.1 1133087 1134520 D TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: rso:RSc1222 hypothetical protein; HflK protein 1133087..1134520 Ralstonia pickettii 12J 6286109 YP_001898647.1 CDS Rpic_1067 NC_010682.1 1134533 1135447 D TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: rso:RSc1223 putative serine protease transmembrane protein; HflC protein 1134533..1135447 Ralstonia pickettii 12J 6286110 YP_001898648.1 CDS Rpic_1068 NC_010682.1 1135524 1135724 D KEGG: rso:RSc1224 hypothetical protein; hypothetical protein 1135524..1135724 Ralstonia pickettii 12J 6286111 YP_001898649.1 CDS hisZ NC_010682.1 1135783 1136946 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 1135783..1136946 Ralstonia pickettii 12J 6286112 YP_001898650.1 CDS Rpic_1070 NC_010682.1 1137042 1138382 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1137042..1138382 Ralstonia pickettii 12J 6289436 YP_001898651.1 CDS Rpic_1071 NC_010682.1 1138498 1139070 D PFAM: phosphoribosyltransferase; KEGG: rso:RSc1227 putative nucleotide phosphoribosyltransferase protein; phosphoribosyltransferase 1138498..1139070 Ralstonia pickettii 12J 6289437 YP_001898652.1 CDS Rpic_1072 NC_010682.1 1139596 1142190 D KEGG: rso:RSc1228 probable exoribonuclease RNase R (VacB protein); TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein; ribonuclease R 1139596..1142190 Ralstonia pickettii 12J 6289439 YP_001898653.1 CDS Rpic_1073 NC_010682.1 1142230 1142982 D TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rso:RSc1229 putative tRNA/rRNA methyltransferase protein; TrmH family RNA methyltransferase 1142230..1142982 Ralstonia pickettii 12J 6286393 YP_001898654.1 CDS Rpic_1074 NC_010682.1 1142982 1143731 D PFAM: Silent information regulator protein Sir2; KEGG: rso:RSc1230 hypothetical protein; silent information regulator protein Sir2 1142982..1143731 Ralstonia pickettii 12J 6286394 YP_001898655.1 CDS Rpic_1075 NC_010682.1 1143747 1144706 R KEGG: rso:RSc1231 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B complement(1143747..1144706) Ralstonia pickettii 12J 6286395 YP_001898656.1 CDS Rpic_1076 NC_010682.1 1144856 1145542 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1144856..1145542 Ralstonia pickettii 12J 6288592 YP_001898657.1 CDS Rpic_1077 NC_010682.1 1145683 1145958 R PFAM: Fe(II) trafficking protein YggX; KEGG: rso:RSc1235 hypothetical protein; hypothetical protein complement(1145683..1145958) Ralstonia pickettii 12J 6288593 YP_001898658.1 CDS Rpic_1078 NC_010682.1 1146066 1147463 R catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase complement(1146066..1147463) Ralstonia pickettii 12J 6288594 YP_001898659.1 CDS Rpic_1079 NC_010682.1 1147535 1151536 D KEGG: rso:RSc1251 probable ATP-dependent RNA helicase protein; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases; ATP-dependent helicase HrpA 1147535..1151536 Ralstonia pickettii 12J 6288595 YP_001898660.1 CDS Rpic_1080 NC_010682.1 1151654 1152649 D PFAM: cytochrome d1 heme region; KEGG: rso:RSc1252 hypothetical signal peptide protein; cytochrome d1 heme subunit 1151654..1152649 Ralstonia pickettii 12J 6286137 YP_001898661.1 CDS Rpic_1081 NC_010682.1 1152661 1153494 D PFAM: polysaccharide deacetylase; KEGG: rso:RSc1253 probable lipoprotein signal peptide; polysaccharide deacetylase 1152661..1153494 Ralstonia pickettii 12J 6286138 YP_001898662.1 CDS Rpic_1082 NC_010682.1 1153496 1154470 D PFAM: fatty acid hydroxylase; KEGG: rso:RSc1254 probable transmembrane protein; fatty acid hydroxylase 1153496..1154470 Ralstonia pickettii 12J 6286139 YP_001898663.1 CDS Rpic_1083 NC_010682.1 1154548 1155405 D KEGG: rso:RSc1255 probable transmembrane protein; hypothetical protein 1154548..1155405 Ralstonia pickettii 12J 6286140 YP_001898664.1 CDS Rpic_1084 NC_010682.1 1155427 1156245 D PFAM: molybdopterin binding domain; KEGG: rso:RSc1256 hypothetical protein; molybdopterin binding domain-containing protein 1155427..1156245 Ralstonia pickettii 12J 6287476 YP_001898665.1 CDS Rpic_1085 NC_010682.1 1156262 1156738 R SMART: Rhodanese domain protein; KEGG: rso:RSc1257 hypothetical protein; rhodanese domain-containing protein complement(1156262..1156738) Ralstonia pickettii 12J 6287477 YP_001898666.1 CDS Rpic_1086 NC_010682.1 1157212 1158627 D TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rso:RSc1258 probable glutamine synthetase protein; glutamine synthetase 1157212..1158627 Ralstonia pickettii 12J 6287478 YP_001898667.1 CDS Rpic_1087 NC_010682.1 1158786 1159310 D KEGG: rso:RSc1259 hypothetical signal peptide protein; hypothetical protein 1158786..1159310 Ralstonia pickettii 12J 6287479 YP_001898668.1 CDS Rpic_1088 NC_010682.1 1159318 1160520 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc1260 probable nitrogen regulation (sensor protein kinase) transcription regulator; signal transduction histidine kinase, nitrogen specific, NtrB 1159318..1160520 Ralstonia pickettii 12J 6286998 YP_001898669.1 CDS Rpic_1089 NC_010682.1 1160591 1162099 D KEGG: rso:RSc1261 probable nitrogen assimilation regulatory response regulator transcription regulator protein; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Fis family nitrogen metabolism transcriptional regulator NtrC 1160591..1162099 Ralstonia pickettii 12J 6286999 YP_001898670.1 CDS Rpic_1090 NC_010682.1 1162215 1162544 R KEGG: rso:RSc1262 hypothetical protein; hypothetical protein complement(1162215..1162544) Ralstonia pickettii 12J 6287000 YP_001898671.1 CDS Rpic_1091 NC_010682.1 1162713 1163606 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: rso:RSc1263 hypothetical protein; HAD-superfamily hydrolase complement(1162713..1163606) Ralstonia pickettii 12J 6287001 YP_001898672.1 CDS Rpic_1092 NC_010682.1 1163804 1165120 D PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1264 probable glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide; family 1 extracellular solute-binding protein 1163804..1165120 Ralstonia pickettii 12J 6286452 YP_001898673.1 CDS Rpic_1093 NC_010682.1 1165197 1166078 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1265 probable sn-glycerol-3-phosphate transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1165197..1166078 Ralstonia pickettii 12J 6286453 YP_001898674.1 CDS Rpic_1094 NC_010682.1 1166097 1166945 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1266 probable sn-glycerol-3-phosphate transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1166097..1166945 Ralstonia pickettii 12J 6286454 YP_001898675.1 CDS ugpC NC_010682.1 1166956 1168053 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 1166956..1168053 Ralstonia pickettii 12J 6286455 YP_001898676.1 CDS ugpQ NC_010682.1 1168050 1168802 D hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 1168050..1168802 Ralstonia pickettii 12J 6289842 YP_001898677.1 CDS sucA NC_010682.1 1169094 1171958 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1169094..1171958 Ralstonia pickettii 12J 6289843 YP_001898678.1 CDS Rpic_1098 NC_010682.1 1172093 1173343 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1172093..1173343 Ralstonia pickettii 12J 6289844 YP_001898679.1 CDS Rpic_1099 NC_010682.1 1173411 1174847 D E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1173411..1174847 Ralstonia pickettii 12J 6289845 YP_001898680.1 CDS Rpic_1100 NC_010682.1 1174948 1176045 D PFAM: AFG1-family ATPase; KEGG: rso:RSc1272 hypothetical protein; AFG1 family ATPase 1174948..1176045 Ralstonia pickettii 12J 6287708 YP_001898681.1 CDS Rpic_1101 NC_010682.1 1176066 1176908 R KEGG: rso:RSc1273 putative lipoprotein; putative lipoprotein complement(1176066..1176908) Ralstonia pickettii 12J 6287709 YP_001898682.1 CDS Rpic_1102 NC_010682.1 1177085 1179628 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rso:RSc1274 probable cation-transporting ATPase lipoprotein transmembrane; heavy metal translocating P-type ATPase 1177085..1179628 Ralstonia pickettii 12J 6287710 YP_001898683.1 CDS Rpic_1103 NC_010682.1 1179639 1179818 D TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: rso:RSc1275 probable signal peptide protein; cbb3-type cytochrome oxidase maturation protein 1179639..1179818 Ralstonia pickettii 12J 6287711 YP_001898684.1 CDS Rpic_1104 NC_010682.1 1179914 1181371 D CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 1179914..1181371 Ralstonia pickettii 12J 6287109 YP_001898685.1 CDS Rpic_1105 NC_010682.1 1181382 1182065 D CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 1181382..1182065 Ralstonia pickettii 12J 6287110 YP_001898686.1 CDS Rpic_1106 NC_010682.1 1182069 1182251 D KEGG: rso:RSc1278 hypothetical signal peptide protein; hypothetical protein 1182069..1182251 Ralstonia pickettii 12J 6287111 YP_001898687.1 CDS Rpic_1107 NC_010682.1 1182264 1183187 D TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: rso:RSc1279 probable cytochrome c oxidase (subunit III) transmembrane protein; cbb3-type cytochrome c oxidase subunit III 1182264..1183187 Ralstonia pickettii 12J 6287112 YP_001898688.1 CDS Rpic_1108 NC_010682.1 1183184 1184647 D TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: rso:RSc1280 probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein; cytochrome c oxidase accessory protein CcoG 1183184..1184647 Ralstonia pickettii 12J 6289432 YP_001898689.1 CDS Rpic_1109 NC_010682.1 1184674 1184901 D KEGG: rso:RSc1281 probable lipoprotein transmembrane; putative transmembrane lipoprotein 1184674..1184901 Ralstonia pickettii 12J 6289433 YP_001898690.1 CDS Rpic_1110 NC_010682.1 1184898 1185152 D KEGG: rso:RSc1282 probable transmembrane protein; hypothetical protein 1184898..1185152 Ralstonia pickettii 12J 6289434 YP_001898691.1 CDS Rpic_1111 NC_010682.1 1185174 1185902 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rso:RSc1283 putative fumarate and nitrate reduction regulatory transcription regulator protein; Crp/Fnr family transcriptional regulator complement(1185174..1185902) Ralstonia pickettii 12J 6289435 YP_001898692.1 CDS Rpic_1112 NC_010682.1 1186079 1186822 D KEGG: rso:RSc1284 probable transmembrane protein; hypothetical protein 1186079..1186822 Ralstonia pickettii 12J 6288774 YP_001898693.1 CDS Rpic_1113 NC_010682.1 1187310 1188152 D TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rso:RSc1285 hypothetical protein; segregation and condensation protein B 1187310..1188152 Ralstonia pickettii 12J 6288775 YP_001898694.1 CDS Rpic_1114 NC_010682.1 1188243 1190027 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rso:RSc1286 hypothetical protein; pseudouridine synthase 1188243..1190027 Ralstonia pickettii 12J 6288776 YP_001898695.1 CDS Rpic_1115 NC_010682.1 1190234 1190722 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1190234..1190722 Ralstonia pickettii 12J 6288777 YP_001898696.1 CDS nusA NC_010682.1 1190719 1192194 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1190719..1192194 Ralstonia pickettii 12J 6286978 YP_001898697.1 CDS infB NC_010682.1 1192257 1195151 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1192257..1195151 Ralstonia pickettii 12J 6286979 YP_001898698.1 CDS rbfA NC_010682.1 1195279 1195650 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1195279..1195650 Ralstonia pickettii 12J 6286980 YP_001898699.1 CDS truB NC_010682.1 1195652 1196608 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1195652..1196608 Ralstonia pickettii 12J 6286981 YP_001898700.1 CDS Rpic_1120 NC_010682.1 1196718 1197116 D KEGG: pol:Bpro_1225 ISPsy11, transposase OrfA; ISPsy11, transposase OrfA 1196718..1197116 Ralstonia pickettii 12J 6286669 YP_001898701.1 CDS Rpic_1121 NC_010682.1 1197119 1197946 D PFAM: Integrase catalytic region; KEGG: pol:Bpro_3089 integrase, catalytic region; Integrase catalytic subunit 1197119..1197946 Ralstonia pickettii 12J 6286670 YP_001898702.1 CDS Rpic_1122 NC_010682.1 1197992 1199548 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1292 probable multidrug resistance B (translocase) transmembrane protein; EmrB/QacA subfamily drug resistance transporter complement(1197992..1199548) Ralstonia pickettii 12J 6286671 YP_001898703.1 CDS Rpic_1123 NC_010682.1 1199552 1200841 R PFAM: secretion protein HlyD family protein; KEGG: rso:RSc1293 probable multidrug resistance A (translocase) transmembrane protein; secretion protein HlyD family protein complement(1199552..1200841) Ralstonia pickettii 12J 6286672 YP_001898704.1 CDS Rpic_1124 NC_010682.1 1200898 1202427 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RSc1294 putative outer membrane channel lipoprotein; NodT family RND efflux system outer membrane lipoprotein complement(1200898..1202427) Ralstonia pickettii 12J 6287645 YP_001898705.1 CDS Rpic_1125 NC_010682.1 1202509 1203027 R PFAM: regulatory protein MarR; KEGG: rso:RSc1295 putative transcription regulator protein; MarR family transcriptional regulator complement(1202509..1203027) Ralstonia pickettii 12J 6287646 YP_001898706.1 CDS Rpic_1126 NC_010682.1 1203278 1205098 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: rso:RSc1296 probable GTP-binding elongation factor protein; GTP-binding protein TypA 1203278..1205098 Ralstonia pickettii 12J 6287647 YP_001898707.1 CDS Rpic_1128 NC_010682.1 1205413 1207002 R PFAM: Rhodanese domain protein; KEGG: pol:Bpro_2041 rhodanese-like; rhodanese domain-containing protein complement(1205413..1207002) Ralstonia pickettii 12J 6289370 YP_001898708.1 CDS Rpic_1129 NC_010682.1 1207259 1208128 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1539 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 1207259..1208128 Ralstonia pickettii 12J 6289371 YP_001898709.1 CDS Rpic_1130 NC_010682.1 1208121 1209026 R PFAM: fatty acid hydroxylase; KEGG: reh:H16_A2293 C-5 sterol desaturase; fatty acid hydroxylase complement(1208121..1209026) Ralstonia pickettii 12J 6289372 YP_001898710.1 CDS Rpic_1131 NC_010682.1 1209039 1210283 D catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 1209039..1210283 Ralstonia pickettii 12J 6289373 YP_001898711.1 CDS Rpic_1132 NC_010682.1 1210378 1210728 D KEGG: bvi:Bcep1808_7770 hypothetical protein; hypothetical protein 1210378..1210728 Ralstonia pickettii 12J 6286141 YP_001898712.1 CDS Rpic_1133 NC_010682.1 1210895 1211128 D hypothetical protein 1210895..1211128 Ralstonia pickettii 12J 6286142 YP_001898713.1 CDS Rpic_1135 NC_010682.1 1212325 1212846 D PFAM: lysis protein; KEGG: rso:RSc1703 probable bacteriophage-related signal peptide protein; lysis protein 1212325..1212846 Ralstonia pickettii 12J 6286144 YP_001898714.1 CDS Rpic_1136 NC_010682.1 1213103 1213681 D hypothetical protein 1213103..1213681 Ralstonia pickettii 12J 6289499 YP_001898715.1 CDS Rpic_1137 NC_010682.1 1213922 1214185 R hypothetical protein complement(1213922..1214185) Ralstonia pickettii 12J 6289500 YP_001898716.1 CDS Rpic_1138 NC_010682.1 1214218 1215009 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gvi:gll1228 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1214218..1215009) Ralstonia pickettii 12J 6289501 YP_001898717.1 CDS Rpic_1139 NC_010682.1 1215041 1215652 R PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0817 probable glutathione S-transferase protein; glutathione S-transferase domain-containing protein complement(1215041..1215652) Ralstonia pickettii 12J 6289502 YP_001898718.1 CDS Rpic_1140 NC_010682.1 1215931 1216254 D PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1215931..1216254 Ralstonia pickettii 12J 6286073 YP_001898719.1 CDS Rpic_1141 NC_010682.1 1216251 1216802 D KEGG: bmu:Bmul_5725 integrase catalytic region; Integrase catalytic subunit 1216251..1216802 Ralstonia pickettii 12J 6286074 YP_001898720.1 CDS Rpic_1142 NC_010682.1 1217019 1217306 D SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: reu:Reut_C6348 hypothetical protein; histone family protein nucleoid-structuring protein H-NS 1217019..1217306 Ralstonia pickettii 12J 6286075 YP_001898721.1 CDS Rpic_1143 NC_010682.1 1217435 1218094 R PFAM: GCN5-related N-acetyltransferase; KEGG: bmn:BMA10247_2163 hypothetical protein; N-acetyltransferase GCN5 complement(1217435..1218094) Ralstonia pickettii 12J 6286076 YP_001898722.1 CDS Rpic_1144 NC_010682.1 1218099 1219460 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: bte:BTH_I1343 8-amino-7-oxononanoate synthase; Glycine C-acetyltransferase complement(1218099..1219460) Ralstonia pickettii 12J 6288441 YP_001898723.1 CDS Rpic_1145 NC_010682.1 1219477 1220370 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(1219477..1220370) Ralstonia pickettii 12J 6288442 YP_001898724.1 CDS Rpic_1146 NC_010682.1 1220370 1228040 R PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: bte:BTH_I1341 putative type I polyketide synthase WcbR; Beta-ketoacyl synthase complement(1220370..1228040) Ralstonia pickettii 12J 6288443 YP_001898725.1 CDS Rpic_1147 NC_010682.1 1228116 1229693 R PFAM: sulfatase; KEGG: bte:BTH_I1340 putative capsular polysaccharide biosynthesis protein WcbQ; sulfatase complement(1228116..1229693) Ralstonia pickettii 12J 6288444 YP_001898726.1 CDS Rpic_1148 NC_010682.1 1229700 1230485 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I1339 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(1229700..1230485) Ralstonia pickettii 12J 6287177 YP_001898727.1 CDS Rpic_1149 NC_010682.1 1230478 1231686 R PFAM: Capsule polysaccharide biosynthesis protein; KEGG: bur:Bcep18194_A3870 capsule polysaccharide biosynthesis; capsular polysaccharide biosynthesis protein complement(1230478..1231686) Ralstonia pickettii 12J 6287178 YP_001898728.1 CDS Rpic_1150 NC_010682.1 1232060 1233226 D KEGG: bte:BTH_I1337 WcbD; WcbD protein 1232060..1233226 Ralstonia pickettii 12J 6287179 YP_001898729.1 CDS Rpic_1151 NC_010682.1 1233245 1234036 D PFAM: ABC-2 type transporter; KEGG: bte:BTH_I1336 CtrC protein; ABC-2 type transporter 1233245..1234036 Ralstonia pickettii 12J 6287180 YP_001898730.1 CDS Rpic_1152 NC_010682.1 1234033 1234686 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I1335 BexA; ABC transporter-like protein 1234033..1234686 Ralstonia pickettii 12J 6286180 YP_001898731.1 CDS Rpic_1154 NC_010682.1 1235138 1236181 D KEGG: pna:Pnap_1393 ISXo7 transposase; ISXo7 transposase 1235138..1236181 Ralstonia pickettii 12J 6286182 YP_001898732.1 CDS Rpic_1155 NC_010682.1 1237327 1237986 R PFAM: transferase hexapeptide repeat containing protein; KEGG: pen:PSEEN4077 chloramphenicol acetyltransferase; transferase hexapeptide repeat containing protein complement(1237327..1237986) Ralstonia pickettii 12J 6286183 YP_001898733.1 CDS Rpic_1156 NC_010682.1 1238055 1239170 R PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I1333 glycosyl transferase, group 1 family protein, putative; group1 glycosyl transferase complement(1238055..1239170) Ralstonia pickettii 12J 6288755 YP_001898734.1 CDS Rpic_1157 NC_010682.1 1239167 1240060 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bte:BTH_I1332 GDP-6-deoxy-D-lyxo-4-hexulose reductase, putative; NAD-dependent epimerase/dehydratase complement(1239167..1240060) Ralstonia pickettii 12J 6288756 YP_001898735.1 CDS Rpic_1158 NC_010682.1 1240064 1241098 R TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bch:Bcen2424_0880 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase complement(1240064..1241098) Ralstonia pickettii 12J 6288757 YP_001898736.1 CDS Rpic_1159 NC_010682.1 1241303 1245499 R PFAM: glycosyl transferase group 1; KEGG: mtp:Mthe_1073 glycosyl transferase, group 1; group1 glycosyl transferase complement(1241303..1245499) Ralstonia pickettii 12J 6288758 YP_001898737.1 CDS Rpic_1160 NC_010682.1 1245499 1248138 R TIGRFAM: methyltransferase FkbM family; KEGG: bte:BTH_I1328 methyltransferase, FkbM family domain protein; methyltransferase FkbM family protein complement(1245499..1248138) Ralstonia pickettii 12J 6286320 YP_001898738.1 CDS Rpic_1161 NC_010682.1 1248347 1249513 R PFAM: polysaccharide export protein; KEGG: bch:Bcen2424_0771 polysaccharide export protein; polysaccharide export protein complement(1248347..1249513) Ralstonia pickettii 12J 6286321 YP_001898739.1 CDS Rpic_1162 NC_010682.1 1249661 1250815 D PFAM: glycosyl transferase group 1; KEGG: bpm:BURPS1710b_3302 WcbB; group1 glycosyl transferase 1249661..1250815 Ralstonia pickettii 12J 6286322 YP_001898740.1 CDS Rpic_1163 NC_010682.1 1250816 1252831 D PFAM: Capsule polysaccharide biosynthesis protein; KEGG: bte:BTH_I1325 WcbA; capsular polysaccharide biosynthesis protein 1250816..1252831 Ralstonia pickettii 12J 6286323 YP_001898741.1 CDS Rpic_1164 NC_010682.1 1252908 1254332 D KEGG: bch:Bcen2424_0879 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1252908..1254332 Ralstonia pickettii 12J 6286926 YP_001898742.1 CDS Rpic_1165 NC_010682.1 1254437 1255540 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: rso:RSc1462 putative signal peptide protein; Male sterility domain complement(1254437..1255540) Ralstonia pickettii 12J 6286927 YP_001898743.1 CDS Rpic_1166 NC_010682.1 1256305 1256928 D KEGG: mlo:mll1871 hypothetical protein; hypothetical protein 1256305..1256928 Ralstonia pickettii 12J 6286928 YP_001898744.1 CDS Rpic_1168 NC_010682.1 1257380 1257751 D PFAM: transposase IS3/IS911 family protein; KEGG: bxe:Bxe_B1867 hypothetical protein; transposase IS3/IS911 family protein 1257380..1257751 Ralstonia pickettii 12J 6286416 YP_001898745.1 CDS Rpic_1169 NC_010682.1 1257748 1258083 D PFAM: IS66 Orf2 family protein; KEGG: psb:Psyr_0746 IS66 Orf2 like; IS66 Orf2 family protein 1257748..1258083 Ralstonia pickettii 12J 6286417 YP_001898746.1 CDS Rpic_1170 NC_010682.1 1258146 1259675 D PFAM: transposase IS66; KEGG: bxe:Bxe_B1865 transposase IS66 family; transposase IS66 1258146..1259675 Ralstonia pickettii 12J 6286418 YP_001898747.1 CDS Rpic_1171 NC_010682.1 1260493 1261743 R KEGG: azo:azo0336 PAS/PAC/GGDEF-domain containing protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor containing diguanylate cyclase complement(1260493..1261743) Ralstonia pickettii 12J 6286419 YP_001898748.1 CDS Rpic_1172 NC_010682.1 1261874 1262650 R PFAM: EAL domain protein; KEGG: pfo:Pfl_0264 putative diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase complement(1261874..1262650) Ralstonia pickettii 12J 6289608 YP_001898749.1 CDS Rpic_1173 NC_010682.1 1263138 1263449 R KEGG: bbt:BBta_3455 putative integrase/recombinase; putative integrase/recombinase complement(1263138..1263449) Ralstonia pickettii 12J 6289609 YP_001898750.1 CDS Rpic_1174 NC_010682.1 1263605 1264588 D TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: rso:RSc1299 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A 1263605..1264588 Ralstonia pickettii 12J 6289610 YP_001898751.1 CDS Rpic_1175 NC_010682.1 1264827 1265222 R KEGG: rso:RSc1301 hypothetical protein; hypothetical protein complement(1264827..1265222) Ralstonia pickettii 12J 6288003 YP_001898752.1 CDS Rpic_1176 NC_010682.1 1265354 1267084 D TIGRFAM: dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rso:RSc1302 hypothetical protein; hypothetical protein 1265354..1267084 Ralstonia pickettii 12J 6288004 YP_001898753.1 CDS Rpic_1177 NC_010682.1 1267101 1267412 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_C0481 hypothetical protein; cyclic nucleotide-binding protein 1267101..1267412 Ralstonia pickettii 12J 6288005 YP_001898754.1 CDS Rpic_1178 NC_010682.1 1267759 1267944 R KEGG: rso:RSc1303 hypothetical protein; hypothetical protein complement(1267759..1267944) Ralstonia pickettii 12J 6289727 YP_001898755.1 CDS Rpic_1179 NC_010682.1 1268064 1268714 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1268064..1268714) Ralstonia pickettii 12J 6289728 YP_001898756.1 CDS Rpic_1180 NC_010682.1 1268968 1269744 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rso:RSc1305 probable ferredoxin--NADP reductase oxidoreductase protein; oxidoreductase FAD-binding domain-containing protein 1268968..1269744 Ralstonia pickettii 12J 6289729 YP_001898757.1 CDS Rpic_1181 NC_010682.1 1269882 1270874 D PFAM: Asparaginase/glutaminase; KEGG: rso:RSc1306 probable L-asparaginase II precursor signal peptide protein; asparaginase 1269882..1270874 Ralstonia pickettii 12J 6289730 YP_001898758.1 CDS rpsF NC_010682.1 1270968 1271336 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1270968..1271336 Ralstonia pickettii 12J 6286129 YP_001898759.1 CDS Rpic_1183 NC_010682.1 1271378 1271704 D KEGG: rso:RSc1308 hypothetical protein; hypothetical protein 1271378..1271704 Ralstonia pickettii 12J 6286130 YP_001898760.1 CDS rpsR NC_010682.1 1271708 1271995 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1271708..1271995 Ralstonia pickettii 12J 6286131 YP_001898761.1 CDS rplI NC_010682.1 1272020 1272472 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1272020..1272472 Ralstonia pickettii 12J 6286132 YP_001898762.1 CDS Rpic_1186 NC_010682.1 1272614 1274002 D unwinds double stranded DNA; replicative DNA helicase 1272614..1274002 Ralstonia pickettii 12J 6287720 YP_001898763.1 CDS Rpic_1187 NC_010682.1 1274152 1274778 D PFAM: protein of unknown function DUF47; KEGG: rso:RSc1312 hypothetical protein; hypothetical protein 1274152..1274778 Ralstonia pickettii 12J 6287721 YP_001898764.1 CDS Rpic_1188 NC_010682.1 1274793 1275803 D PFAM: phosphate transporter; KEGG: rso:RSc1313 probable low-affinity phosphate transporter lipoprotein transmembrane; phosphate transporter 1274793..1275803 Ralstonia pickettii 12J 6287722 YP_001898765.1 CDS Rpic_1189 NC_010682.1 1275886 1276635 R PFAM: NLP/P60 protein; KEGG: rso:RSc1314 probable lipoprotein transmembrane; NLP/P60 protein complement(1275886..1276635) Ralstonia pickettii 12J 6287723 YP_001898766.1 CDS Rpic_1190 NC_010682.1 1276777 1277202 R KEGG: rso:RSc1315 putative signal peptide protein; putative signal peptide protein complement(1276777..1277202) Ralstonia pickettii 12J 6288817 YP_001898767.1 CDS Rpic_1191 NC_010682.1 1277324 1279051 R PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: rso:RSc1316 hypothetical protein; PhoH family protein complement(1277324..1279051) Ralstonia pickettii 12J 6288818 YP_001898768.1 CDS Rpic_1192 NC_010682.1 1279515 1279979 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc1317 probable bacterioferritin comigratory oxidoreductase protein; alkyl hydroperoxide reductase complement(1279515..1279979) Ralstonia pickettii 12J 6288819 YP_001898769.1 CDS Rpic_1193 NC_010682.1 1280075 1280968 R PFAM: polysaccharide deacetylase; KEGG: rso:RSc1318 hypothetical protein; polysaccharide deacetylase complement(1280075..1280968) Ralstonia pickettii 12J 6288820 YP_001898770.1 CDS Rpic_1194 NC_010682.1 1281004 1282062 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: rso:RSc1319 hypothetical protein; NAD-dependent epimerase/dehydratase family protein complement(1281004..1282062) Ralstonia pickettii 12J 6287716 YP_001898771.1 CDS Rpic_1195 NC_010682.1 1282079 1283020 R PFAM: formyl transferase domain protein; KEGG: rso:RSc1320 hypothetical protein; putative formyltransferase complement(1282079..1283020) Ralstonia pickettii 12J 6287717 YP_001898772.1 CDS Rpic_1196 NC_010682.1 1283017 1284012 R PFAM: glycosyl transferase family 2; KEGG: rso:RSc1321 putative polymixin resistance glycosyltransferase transmembrane protein; family 2 glycosyl transferase complement(1283017..1284012) Ralstonia pickettii 12J 6287718 YP_001898773.1 CDS Rpic_1197 NC_010682.1 1284020 1285180 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rso:RSc1322 putative aminotransferase protein; glutamine--scyllo-inositol transaminase complement(1284020..1285180) Ralstonia pickettii 12J 6287719 YP_001898774.1 CDS Rpic_1198 NC_010682.1 1285221 1285592 R PFAM: small multidrug resistance protein; KEGG: rso:RSc1323 putative small multidrug resistance transmembrane protein; small multidrug resistance protein complement(1285221..1285592) Ralstonia pickettii 12J 6288409 YP_001898775.1 CDS Rpic_1199 NC_010682.1 1285719 1287389 R PFAM: glycosyl transferase family 39; KEGG: rso:RSc1324 probable transmembrane protein; glycosyl transferase family protein complement(1285719..1287389) Ralstonia pickettii 12J 6288410 YP_001898776.1 CDS Rpic_1200 NC_010682.1 1287394 1287774 R PFAM: protein of unknown function DUF498; KEGG: rso:RSc1325 hypothetical protein; hypothetical protein complement(1287394..1287774) Ralstonia pickettii 12J 6288411 YP_001898777.1 CDS Rpic_1201 NC_010682.1 1288073 1289314 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 1288073..1289314 Ralstonia pickettii 12J 6288412 YP_001898778.1 CDS Rpic_1202 NC_010682.1 1289413 1290732 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1289413..1290732 Ralstonia pickettii 12J 6286235 YP_001898779.1 CDS Rpic_1203 NC_010682.1 1290748 1292193 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1290748..1292193 Ralstonia pickettii 12J 6286236 YP_001898780.1 CDS Rpic_1204 NC_010682.1 1292198 1292815 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: rso:RSc1329 hypothetical protein; uracil-DNA glycosylase 1292198..1292815 Ralstonia pickettii 12J 6286237 YP_001898781.1 CDS Rpic_1205 NC_010682.1 1292897 1294156 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: rso:RSc1330 putative molybdopterin biosynthesis MoeA protein; molybdenum cofactor synthesis domain-containing protein 1292897..1294156 Ralstonia pickettii 12J 6286238 YP_001898782.1 CDS Rpic_1206 NC_010682.1 1294169 1294426 D TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rso:RSc1331 probable molybdopterin MPT converting factor (subunit 1) protein; molybdopterin converting factor subunit 1 1294169..1294426 Ralstonia pickettii 12J 6286448 YP_001898783.1 CDS Rpic_1207 NC_010682.1 1294443 1294964 D PFAM: molybdopterin biosynthesis MoaE protein; KEGG: rso:RSc1332 probable molybdopterin MPT converting factor (subunit 2) protein; molybdopterin biosynthesis MoaE protein 1294443..1294964 Ralstonia pickettii 12J 6286449 YP_001898784.1 CDS Rpic_1208 NC_010682.1 1294980 1295360 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1294980..1295360 Ralstonia pickettii 12J 6286450 YP_001898785.1 CDS Rpic_1209 NC_010682.1 1295507 1297684 D KEGG: rso:RSc1334 probable D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane 1295507..1297684 Ralstonia pickettii 12J 6286451 YP_001898786.1 CDS Rpic_1210 NC_010682.1 1297855 1300443 D KEGG: rso:RSc1335 probable ATP-dependent protease (heat shock protein); TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 1297855..1300443 Ralstonia pickettii 12J 6287649 YP_001898787.1 CDS Rpic_1211 NC_010682.1 1300726 1301745 D TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1336 probable sulfate-binding precursor signal peptide protein; sulfate ABC transporter substrate-binding protein 1300726..1301745 Ralstonia pickettii 12J 6287650 YP_001898788.1 CDS Rpic_1212 NC_010682.1 1301783 1302406 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rso:RSc1337 probable NADPH-dependent FMN reductase oxidoreductase protein; NADPH-dependent FMN reductase 1301783..1302406 Ralstonia pickettii 12J 6287651 YP_001898789.1 CDS Rpic_1213 NC_010682.1 1302524 1303516 D KEGG: reu:Reut_A1977 ABC transporter, substrate-binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein 1302524..1303516 Ralstonia pickettii 12J 6287652 YP_001898790.1 CDS Rpic_1214 NC_010682.1 1303522 1304553 D TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc1338 putative alkanesulfonates binding precursor signal peptide protein; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein 1303522..1304553 Ralstonia pickettii 12J 6286168 YP_001898791.1 CDS Rpic_1215 NC_010682.1 1304597 1305760 D catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1304597..1305760 Ralstonia pickettii 12J 6286169 YP_001898792.1 CDS Rpic_1216 NC_010682.1 1305779 1306591 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1340 putative aliphatic sulfonates transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1305779..1306591 Ralstonia pickettii 12J 6286170 YP_001898793.1 CDS Rpic_1217 NC_010682.1 1306611 1307450 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1341 putative aliphatic sulfonates ATP-binding ABC transporter protein; ABC transporter-like protein 1306611..1307450 Ralstonia pickettii 12J 6286171 YP_001898794.1 CDS Rpic_1218 NC_010682.1 1307521 1307736 D PFAM: TOBE domain protein; KEGG: rso:RSc1342 putative molybdopterin-binding protein; TOBE domain-containing protein 1307521..1307736 Ralstonia pickettii 12J 6287796 YP_001898795.1 CDS Rpic_1219 NC_010682.1 1307777 1308661 D PFAM: EAL domain protein; KEGG: rso:RSc1343 hypothetical protein; diguanylate phosphodiesterase 1307777..1308661 Ralstonia pickettii 12J 6287797 YP_001898796.1 CDS Rpic_1220 NC_010682.1 1308672 1309346 D PFAM: protein of unknown function DUF1234; KEGG: rso:RSc1344 hypothetical protein; hypothetical protein 1308672..1309346 Ralstonia pickettii 12J 6287798 YP_001898797.1 CDS Rpic_1221 NC_010682.1 1309464 1310378 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1345 putative sulfate transport ABC transporter protein; sulfate ABC transporter permease 1309464..1310378 Ralstonia pickettii 12J 6287799 YP_001898798.1 CDS Rpic_1222 NC_010682.1 1310380 1311360 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1346 putative sulfate transport ABC transporter protein; sulfate ABC transporter permease 1310380..1311360 Ralstonia pickettii 12J 6289715 YP_001898799.1 CDS Rpic_1223 NC_010682.1 1311357 1312466 D KEGG: rso:RSc1347 probable sulfate transport ATP-binding ABC transporter protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; sulfate ABC transporter ATPase 1311357..1312466 Ralstonia pickettii 12J 6289716 YP_001898800.1 CDS Rpic_1224 NC_010682.1 1312507 1313466 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1348 transcriptional regulator CysB-like protein; transcriptional regulator CysB-like protein 1312507..1313466 Ralstonia pickettii 12J 6289717 YP_001898801.1 CDS Rpic_1225 NC_010682.1 1313595 1313906 D KEGG: rso:RSc1350 probable transmembrane protein; hypothetical protein 1313595..1313906 Ralstonia pickettii 12J 6289718 YP_001898802.1 CDS Rpic_1226 NC_010682.1 1313906 1315174 D PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: rso:RSc1351 putative transmembrane sensor histidine kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase 1313906..1315174 Ralstonia pickettii 12J 6287193 YP_001898803.1 CDS Rpic_1227 NC_010682.1 1315178 1316011 D PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: rso:RSc1352 probable two-component response regulator transcription regulator protein; LytTR family two component transcriptional regulator 1315178..1316011 Ralstonia pickettii 12J 6287194 YP_001898804.1 CDS Rpic_1228 NC_010682.1 1316080 1317807 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rso:RSc1353 acetolactate synthase 2 catalytic subunit; thiamine pyrophosphate protein 1316080..1317807 Ralstonia pickettii 12J 6287195 YP_001898805.1 CDS Rpic_1229 NC_010682.1 1317854 1318351 D regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 1317854..1318351 Ralstonia pickettii 12J 6287196 YP_001898806.1 CDS Rpic_1230 NC_010682.1 1318348 1318770 D PFAM: AIG2 family protein; KEGG: rso:RSc1355 hypothetical protein; AIG2 family protein 1318348..1318770 Ralstonia pickettii 12J 6286077 YP_001898807.1 CDS Rpic_1231 NC_010682.1 1319079 1319378 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 1319079..1319378 Ralstonia pickettii 12J 6286078 YP_001898808.1 CDS Rpic_1232 NC_010682.1 1319775 1321079 D TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: rso:RSc1358 isocitrate lyase; isocitrate lyase 1319775..1321079 Ralstonia pickettii 12J 6286079 YP_001898809.1 CDS Rpic_1233 NC_010682.1 1321248 1321682 R PFAM: UspA domain protein; KEGG: rso:RSc1359 hypothetical protein; UspA domain-containing protein complement(1321248..1321682) Ralstonia pickettii 12J 6286080 YP_001898810.1 CDS Rpic_1234 NC_010682.1 1321767 1322696 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1360 probable transcription regulator protein; LysR family transcriptional regulator complement(1321767..1322696) Ralstonia pickettii 12J 6287696 YP_001898811.1 CDS Rpic_1235 NC_010682.1 1322915 1323613 D KEGG: rso:RSc1362 putative 2-haloalkanoic acid dehalogenase protein; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase I 1322915..1323613 Ralstonia pickettii 12J 6287697 YP_001898812.1 CDS Rpic_1236 NC_010682.1 1323699 1325279 D Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 1323699..1325279 Ralstonia pickettii 12J 6287698 YP_001898813.1 CDS Rpic_1237 NC_010682.1 1325523 1325993 D PFAM: Domain of unknown function DUF1857; KEGG: rso:RSc1364 hypothetical protein; hypothetical protein 1325523..1325993 Ralstonia pickettii 12J 6287699 YP_001898814.1 CDS Rpic_1238 NC_010682.1 1326084 1327541 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1365 putative multidrug resistance-like efflux transmembrane protein; EmrB/QacA subfamily drug resistance transporter 1326084..1327541 Ralstonia pickettii 12J 6288529 YP_001898815.1 CDS Rpic_1239 NC_010682.1 1327585 1327854 R PFAM: acyl-coA-binding protein ACBP; KEGG: rso:RSc1366 probable acyl-CoA-binding protein; acyl-coA-binding protein ACBP complement(1327585..1327854) Ralstonia pickettii 12J 6288530 YP_001898816.1 CDS Rpic_1240 NC_010682.1 1328028 1328768 D PFAM: peptidase M22 glycoprotease; KEGG: rso:RSc1367 putative transmembrane protein; peptidase M22 glycoprotease 1328028..1328768 Ralstonia pickettii 12J 6288531 YP_001898817.1 CDS Rpic_1241 NC_010682.1 1328765 1329292 D TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc1368 probable acyltransferase protein; ribosomal-protein-alanine acetyltransferase 1328765..1329292 Ralstonia pickettii 12J 6288532 YP_001898818.1 CDS Rpic_1242 NC_010682.1 1329289 1330083 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rso:RSc1369 putative DNA polymerase-related protein, bacteriophage-type; phage SPO1 DNA polymerase-like protein 1329289..1330083 Ralstonia pickettii 12J 6289335 YP_001898819.1 CDS Rpic_1243 NC_010682.1 1330111 1331427 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1370 hypothetical protein; lysophospholipid transporter LplT complement(1330111..1331427) Ralstonia pickettii 12J 6289336 YP_001898820.1 CDS alr NC_010682.1 1332075 1333199 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1332075..1333199 Ralstonia pickettii 12J 6289337 YP_001898821.1 CDS Rpic_1245 NC_010682.1 1333268 1334638 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1333268..1334638 Ralstonia pickettii 12J 6289338 YP_001898822.1 CDS Rpic_1246 NC_010682.1 1334749 1335228 D disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 1334749..1335228 Ralstonia pickettii 12J 6289088 YP_001898823.1 CDS Rpic_1247 NC_010682.1 1335245 1335646 D KEGG: rso:RSc1374 hypothetical protein; hypothetical protein 1335245..1335646 Ralstonia pickettii 12J 6289089 YP_001898824.1 CDS Rpic_1248 NC_010682.1 1335754 1336860 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rso:RSc1375 putative racemase transmembrane protein; L-carnitine dehydratase/bile acid-inducible protein F complement(1335754..1336860) Ralstonia pickettii 12J 6289090 YP_001898825.1 CDS Rpic_1249 NC_010682.1 1336892 1338829 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1376 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(1336892..1338829) Ralstonia pickettii 12J 6289091 YP_001898826.1 CDS Rpic_1250 NC_010682.1 1339070 1340059 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rso:RSc1377 hypothetical protein; RpiR family transcriptional regulator 1339070..1340059 Ralstonia pickettii 12J 6289444 YP_001898827.1 CDS Rpic_1251 NC_010682.1 1340077 1341039 D PFAM: peptidase T2 asparaginase 2; KEGG: rso:RSc1378 probable L-asparaginase precursor protein; peptidase T2 asparaginase 2 1340077..1341039 Ralstonia pickettii 12J 6289445 YP_001898828.1 CDS Rpic_1252 NC_010682.1 1341079 1342968 D KEGG: rso:RSc1379 probable ATP-binding ABC transporter protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1341079..1342968 Ralstonia pickettii 12J 6289446 YP_001898829.1 CDS Rpic_1253 NC_010682.1 1343018 1344571 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc1380 probable substrate-binding periplasmic (PBP) ABC transporter protein; family 5 extracellular solute-binding protein 1343018..1344571 Ralstonia pickettii 12J 6289447 YP_001898830.1 CDS Rpic_1254 NC_010682.1 1344641 1345564 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1381 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1344641..1345564 Ralstonia pickettii 12J 6288493 YP_001898831.1 CDS Rpic_1255 NC_010682.1 1345575 1346474 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1382 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1345575..1346474 Ralstonia pickettii 12J 6288494 YP_001898832.1 CDS Rpic_1256 NC_010682.1 1346485 1347510 D PFAM: peptidase S58 DmpA; KEGG: rso:RSc1383 probable D-aminopeptidase protein; peptidase S58 DmpA 1346485..1347510 Ralstonia pickettii 12J 6288495 YP_001898833.1 CDS Rpic_1257 NC_010682.1 1347519 1348334 D PFAM: peptidase M55 D-aminopeptidase; KEGG: rso:RSc1384 hypothetical protein; peptidase M55 D-aminopeptidase 1347519..1348334 Ralstonia pickettii 12J 6288496 YP_001898834.1 CDS Rpic_1258 NC_010682.1 1348670 1349029 D PFAM: chitin binding Peritrophin-A; KEGG: rso:RSc1385 probable lipoprotein transmembrane; chitin-binding peritrophin-A 1348670..1349029 Ralstonia pickettii 12J 6288343 YP_001898835.1 CDS Rpic_1259 NC_010682.1 1349069 1349860 R KEGG: bch:Bcen2424_4457 metal-binding integral membrane protein-like protein; metal-binding integral membrane protein complement(1349069..1349860) Ralstonia pickettii 12J 6288344 YP_001898836.1 CDS Rpic_1260 NC_010682.1 1349857 1350501 R PFAM: protein of unknown function DUF1326; KEGG: bch:Bcen2424_4458 protein of unknown function DUF1326; hypothetical protein complement(1349857..1350501) Ralstonia pickettii 12J 6288345 YP_001898837.1 CDS Rpic_1261 NC_010682.1 1350827 1351729 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(1350827..1351729) Ralstonia pickettii 12J 6288346 YP_001898838.1 CDS Rpic_1262 NC_010682.1 1351745 1352263 R PFAM: adenylate cyclase; KEGG: rso:RSc1389 hypothetical protein; adenylate cyclase complement(1351745..1352263) Ralstonia pickettii 12J 6288790 YP_001898839.1 CDS Rpic_1263 NC_010682.1 1352275 1353435 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(1352275..1353435) Ralstonia pickettii 12J 6288791 YP_001898840.1 CDS Rpic_1264 NC_010682.1 1353467 1353811 R PFAM: arsenate reductase and related; KEGG: rso:RSc1391 hypothetical protein; arsenate reductase-like protein complement(1353467..1353811) Ralstonia pickettii 12J 6288792 YP_001898841.1 CDS Rpic_1265 NC_010682.1 1353826 1354239 R KEGG: rso:RSc1392 putative transmembrane protein; hypothetical protein complement(1353826..1354239) Ralstonia pickettii 12J 6288793 YP_001898842.1 CDS dapD NC_010682.1 1354300 1355127 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(1354300..1355127) Ralstonia pickettii 12J 6287363 YP_001898843.1 CDS Rpic_1267 NC_010682.1 1355174 1356373 R catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase complement(1355174..1356373) Ralstonia pickettii 12J 6287364 YP_001898844.1 CDS Rpic_1268 NC_010682.1 1356515 1357435 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc1395 probable transmembrane protein; hypothetical protein 1356515..1357435 Ralstonia pickettii 12J 6287365 YP_001898845.1 CDS Rpic_1269 NC_010682.1 1357473 1358519 D PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc1396 putative transmembrane protein; alpha/beta hydrolase fold protein 1357473..1358519 Ralstonia pickettii 12J 6287366 YP_001898846.1 CDS Rpic_1270 NC_010682.1 1358770 1362285 D TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: reu:Reut_A1888 chromosome segregation protein SMC; chromosome segregation protein SMC 1358770..1362285 Ralstonia pickettii 12J 6286324 YP_001898847.1 CDS Rpic_1271 NC_010682.1 1362286 1363500 D SMART: ZipA FtsZ-binding region; KEGG: rso:RSc1397 hypothetical protein; FtsZ-binding protein ZipA 1362286..1363500 Ralstonia pickettii 12J 6286325 YP_001898848.1 CDS Rpic_1272 NC_010682.1 1363511 1365964 D KEGG: rso:RSc1398 putative DNA ligase (polydeoxyribonucleotide synthase [NAD+]) protein; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; DNA ligase 1363511..1365964 Ralstonia pickettii 12J 6286326 YP_001898849.1 CDS Rpic_1273 NC_010682.1 1365961 1366494 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1365961..1366494 Ralstonia pickettii 12J 6286327 YP_001898850.1 CDS Rpic_1274 NC_010682.1 1366563 1367684 D KEGG: rso:RSc1400 putative transmembrane protein; hypothetical protein 1366563..1367684 Ralstonia pickettii 12J 6287069 YP_001898851.1 CDS Rpic_1275 NC_010682.1 1367760 1369784 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rso:RSc1401 probable arginine/proline rich protein; RNA-binding S4 domain-containing protein complement(1367760..1369784) Ralstonia pickettii 12J 6287070 YP_001898852.1 CDS Rpic_1276 NC_010682.1 1369768 1372356 R catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase complement(1369768..1372356) Ralstonia pickettii 12J 6287071 YP_001898853.1 CDS Rpic_1277 NC_010682.1 1372475 1373299 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1372475..1373299) Ralstonia pickettii 12J 6287072 YP_001898854.1 CDS rpsB NC_010682.1 1373604 1374347 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1373604..1374347 Ralstonia pickettii 12J 6289424 YP_001898855.1 CDS tsf NC_010682.1 1374601 1375479 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1374601..1375479 Ralstonia pickettii 12J 6289425 YP_001898856.1 CDS pyrH NC_010682.1 1375772 1376482 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1375772..1376482 Ralstonia pickettii 12J 6289426 YP_001898857.1 CDS frr NC_010682.1 1376659 1377219 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1376659..1377219 Ralstonia pickettii 12J 6289427 YP_001898858.1 CDS Rpic_1282 NC_010682.1 1377272 1378048 D KEGG: rso:RSc1408 probable undecaprenyl pyrophosphate synthetase protein; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1377272..1378048 Ralstonia pickettii 12J 6289308 YP_001898859.1 CDS Rpic_1283 NC_010682.1 1378052 1378870 D PFAM: phosphatidate cytidylyltransferase; KEGG: rso:RSc1409 probable phosphatidate cytidylyltransferase transmembrane protein; phosphatidate cytidylyltransferase 1378052..1378870 Ralstonia pickettii 12J 6289309 YP_001898860.1 CDS Rpic_1284 NC_010682.1 1378882 1380072 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1378882..1380072 Ralstonia pickettii 12J 6289310 YP_001898861.1 CDS Rpic_1285 NC_010682.1 1380159 1381547 D KEGG: rso:RSc1411 probable transmembrane protein; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 1380159..1381547 Ralstonia pickettii 12J 6289311 YP_001898862.1 CDS Rpic_1286 NC_010682.1 1381663 1383960 D TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rso:RSc1412 putative outer membrane signal peptide protein; outer membrane protein assembly complex, YaeT protein 1381663..1383960 Ralstonia pickettii 12J 6287033 YP_001898863.1 CDS Rpic_1287 NC_010682.1 1383960 1384511 D PFAM: outer membrane chaperone Skp (OmpH); KEGG: rso:RSc1413 probable transmembrane protein; outer membrane chaperone Skp 1383960..1384511 Ralstonia pickettii 12J 6287034 YP_001898864.1 CDS lpxD NC_010682.1 1384522 1385595 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1384522..1385595 Ralstonia pickettii 12J 6287035 YP_001898865.1 CDS fabZ NC_010682.1 1385592 1386095 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1385592..1386095 Ralstonia pickettii 12J 6287036 YP_001898866.1 CDS Rpic_1290 NC_010682.1 1386092 1386907 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1386092..1386907 Ralstonia pickettii 12J 6288924 YP_001898867.1 CDS lpxB NC_010682.1 1386949 1388082 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1386949..1388082 Ralstonia pickettii 12J 6288925 YP_001898868.1 CDS rnhB NC_010682.1 1388087 1388785 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1388087..1388785 Ralstonia pickettii 12J 6288926 YP_001898869.1 CDS Rpic_1293 NC_010682.1 1388808 1389590 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rso:RSc1419 putative tRNA/rRNA methyltransferase protein; tRNA/rRNA methyltransferase SpoU 1388808..1389590 Ralstonia pickettii 12J 6288927 YP_001898870.1 CDS Rpic_1294 NC_010682.1 1389733 1390608 D KEGG: bur:Bcep18194_B0710 hypothetical protein; hypothetical protein 1389733..1390608 Ralstonia pickettii 12J 6288107 YP_001898871.1 CDS Rpic_1295 NC_010682.1 1390626 1392434 D PFAM: alpha/beta hydrolase fold; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmu:Bmul_3649 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 1390626..1392434 Ralstonia pickettii 12J 6288108 YP_001898872.1 CDS Rpic_1296 NC_010682.1 1392467 1393363 D KEGG: bte:BTH_II1809 FF domain protein; FF domain-containing protein 1392467..1393363 Ralstonia pickettii 12J 6288109 YP_001898873.1 CDS Rpic_1297 NC_010682.1 1393439 1394290 R PFAM: protein of unknown function DUF299; KEGG: rso:RSc1420 hypothetical protein; hypothetical protein complement(1393439..1394290) Ralstonia pickettii 12J 6288110 YP_001898874.1 CDS Rpic_1298 NC_010682.1 1394521 1396908 D catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1394521..1396908 Ralstonia pickettii 12J 6286954 YP_001898875.1 CDS Rpic_1299 NC_010682.1 1397074 1397499 D PFAM: protein of unknown function DUF107; KEGG: rso:RSc1422 probable transmembrane protein; hypothetical protein 1397074..1397499 Ralstonia pickettii 12J 6286955 YP_001898876.1 CDS Rpic_1300 NC_010682.1 1397549 1398475 D PFAM: band 7 protein; KEGG: rso:RSc1423 putative transmembrane protein; hypothetical protein 1397549..1398475 Ralstonia pickettii 12J 6286956 YP_001898877.1 CDS smpB NC_010682.1 1398494 1398940 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(1398494..1398940) Ralstonia pickettii 12J 6286957 YP_001898878.1 CDS Rpic_1302 NC_010682.1 1399066 1399503 D PFAM: cyclase/dehydrase; KEGG: rso:RSc1425 hypothetical protein; cyclase/dehydrase 1399066..1399503 Ralstonia pickettii 12J 6289786 YP_001898879.1 CDS Rpic_1303 NC_010682.1 1399490 1399855 D PFAM: protein of unknown function UPF0125; KEGG: rso:RSc1426 hypothetical protein; hypothetical protein 1399490..1399855 Ralstonia pickettii 12J 6289787 YP_001898880.1 CDS Rpic_1304 NC_010682.1 1399863 1400402 R KEGG: rso:RSc1427 probable transmembrane protein; hypothetical protein complement(1399863..1400402) Ralstonia pickettii 12J 6289788 YP_001898881.1 CDS Rpic_1305 NC_010682.1 1400557 1401501 R KEGG: rso:RSc1428 probable transmembrane protein; hypothetical protein complement(1400557..1401501) Ralstonia pickettii 12J 6289789 YP_001898882.1 CDS Rpic_1306 NC_010682.1 1401656 1403119 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 1401656..1403119 Ralstonia pickettii 12J 6286581 YP_001898883.1 CDS Rpic_1307 NC_010682.1 1403250 1403828 D KEGG: rso:RSc1430 probable transmembrane protein; hypothetical protein 1403250..1403828 Ralstonia pickettii 12J 6286582 YP_001898884.1 CDS guaA NC_010682.1 1403803 1405422 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1403803..1405422 Ralstonia pickettii 12J 6286583 YP_001898885.1 CDS Rpic_1309 NC_010682.1 1405524 1405736 R KEGG: rso:RSc2704 hypothetical protein; hypothetical protein complement(1405524..1405736) Ralstonia pickettii 12J 6286584 YP_001898886.1 CDS Rpic_1310 NC_010682.1 1406004 1406207 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: reh:H16_B1929 cold shock protein, DNA-binding; cold-shock DNA-binding domain-containing protein 1406004..1406207 Ralstonia pickettii 12J 6287313 YP_001898887.1 CDS Rpic_1311 NC_010682.1 1406377 1407021 R KEGG: reu:Reut_A3203 hypothetical protein; hypothetical protein complement(1406377..1407021) Ralstonia pickettii 12J 6287314 YP_001898888.1 CDS Rpic_1312 NC_010682.1 1407058 1408278 R KEGG: reh:H16_B0827 hypothetical protein; hypothetical protein complement(1407058..1408278) Ralstonia pickettii 12J 6287315 YP_001898889.1 CDS Rpic_1313 NC_010682.1 1408365 1409135 D PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bam:Bamb_2026 protein of unknown function DUF899, thioredoxin family protein; hypothetical protein 1408365..1409135 Ralstonia pickettii 12J 6287316 YP_001898890.1 CDS Rpic_1314 NC_010682.1 1409110 1409883 D KEGG: reh:H16_B0829 hypothetical protein; hypothetical protein 1409110..1409883 Ralstonia pickettii 12J 6288059 YP_001898891.1 CDS Rpic_1316 NC_010682.1 1410279 1411667 D PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA2410 putative sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1410279..1411667 Ralstonia pickettii 12J 6288061 YP_001898892.1 CDS Rpic_1317 NC_010682.1 1411733 1412677 R TIGRFAM: pca operon transcription factor PcaQ; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1440 probable transcriptional regulatory DNA-binding transcription regulator protein; LysR family transcriptional regulator complement(1411733..1412677) Ralstonia pickettii 12J 6288062 YP_001898893.1 CDS Rpic_1318 NC_010682.1 1412771 1413520 D TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: rso:RSc1441 probable protocatechuate 3,4-dioxygenase (beta chain) oxidoreductase protein; protocatechuate 3,4-dioxygenase subunit beta 1412771..1413520 Ralstonia pickettii 12J 6289175 YP_001898894.1 CDS Rpic_1319 NC_010682.1 1413520 1414215 D KEGG: rso:RSc1442 probable protocatechuate 3,4-dioxygenase (alpha chain) oxidoreductase protein; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; protocatechuate 3,4-dioxygenase subunit alpha 1413520..1414215 Ralstonia pickettii 12J 6289176 YP_001898895.1 CDS Rpic_1320 NC_010682.1 1414277 1414945 D TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: rso:RSc1443 putative ligase protein; 2'-5' RNA ligase 1414277..1414945 Ralstonia pickettii 12J 6289177 YP_001898896.1 CDS Rpic_1321 NC_010682.1 1414957 1415652 R KEGG: rso:RSc1444 hypothetical protein; hypothetical protein complement(1414957..1415652) Ralstonia pickettii 12J 6289178 YP_001898897.1 CDS Rpic_1322 NC_010682.1 1415678 1416559 R PFAM: beta-lactamase domain protein; KEGG: psb:Psyr_2218 beta-lactamase-like; beta-lactamase domain-containing protein complement(1415678..1416559) Ralstonia pickettii 12J 6286093 YP_001898898.1 CDS Rpic_1323 NC_010682.1 1416669 1417571 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3335 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 1416669..1417571 Ralstonia pickettii 12J 6286094 YP_001898899.1 CDS Rpic_1324 NC_010682.1 1417564 1418775 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1445 probable transmembrane protein; major facilitator superfamily protein complement(1417564..1418775) Ralstonia pickettii 12J 6286095 YP_001898900.1 CDS Rpic_1325 NC_010682.1 1418805 1419632 R KEGG: rso:RSc1448 hypothetical protein; hypothetical protein complement(1418805..1419632) Ralstonia pickettii 12J 6286096 YP_001898901.1 CDS Rpic_1326 NC_010682.1 1419636 1420334 R PFAM: DSBA oxidoreductase; KEGG: mpt:Mpe_A0744 2-hydroxychromene-2-carboxylate isomerase family protein; DSBA oxidoreductase complement(1419636..1420334) Ralstonia pickettii 12J 6288912 YP_001898902.1 CDS Rpic_1327 NC_010682.1 1420400 1421344 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A0745 LysR family regulatory protein; LysR family transcriptional regulator complement(1420400..1421344) Ralstonia pickettii 12J 6288913 YP_001898903.1 CDS Rpic_1328 NC_010682.1 1421493 1422710 D PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_1093 major facilitator superfamily MFS_1; major facilitator superfamily protein 1421493..1422710 Ralstonia pickettii 12J 6288914 YP_001898904.1 CDS Rpic_1329 NC_010682.1 1422957 1423595 D KEGG: rso:RSc1449 hypothetical protein; hypothetical protein 1422957..1423595 Ralstonia pickettii 12J 6288915 YP_001898905.1 CDS Rpic_1330 NC_010682.1 1423674 1424150 D TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rso:RSc1450 putative 6-pyruvoyl tetrahydrobiopterin synthase protein; queuosine biosynthesis protein QueD 1423674..1424150 Ralstonia pickettii 12J 6286922 YP_001898906.1 CDS Rpic_1331 NC_010682.1 1424170 1424718 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rso:RSc1451 putative hydrolase protein; zinc-binding CMP/dCMP deaminase 1424170..1424718 Ralstonia pickettii 12J 6286923 YP_001898907.1 CDS ldcA NC_010682.1 1424715 1425641 D catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A 1424715..1425641 Ralstonia pickettii 12J 6286924 YP_001898908.1 CDS Rpic_1333 NC_010682.1 1425694 1427376 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1453 probable ATP-binding ABC transporter protein; ABC transporter-like protein 1425694..1427376 Ralstonia pickettii 12J 6286925 YP_001898909.1 CDS Rpic_1334 NC_010682.1 1427617 1428240 D KEGG: kpn:KPN_pKPN5p08190 hypothetical protein; hypothetical protein 1427617..1428240 Ralstonia pickettii 12J 6287724 YP_001898910.1 CDS Rpic_1335 NC_010682.1 1428563 1430110 D KEGG: reu:Reut_A1290 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase 1428563..1430110 Ralstonia pickettii 12J 6287725 YP_001898911.1 CDS Rpic_1336 NC_010682.1 1430130 1431023 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_1795 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1430130..1431023) Ralstonia pickettii 12J 6287726 YP_001898912.1 CDS Rpic_1337 NC_010682.1 1431218 1431733 R KEGG: rso:RSc1455 probable proline-rich protein; hypothetical protein complement(1431218..1431733) Ralstonia pickettii 12J 6287727 YP_001898913.1 CDS Rpic_1338 NC_010682.1 1431886 1433322 D PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RSc1456 putative betaine aldehyde dehydrogenase (BADH) oxidoreductase protein; aldehyde dehydrogenase 1431886..1433322 Ralstonia pickettii 12J 6286081 YP_001898914.1 CDS Rpic_1339 NC_010682.1 1433392 1433652 R PFAM: protein of unknown function DUF1289; KEGG: rso:RSc1457 hypothetical protein; hypothetical protein complement(1433392..1433652) Ralstonia pickettii 12J 6286082 YP_001898915.1 CDS Rpic_1340 NC_010682.1 1433694 1435565 R PFAM: glycoside hydrolase 15-related; KEGG: rso:RSc1458 hypothetical protein; glycoside hydrolase 15-like protein complement(1433694..1435565) Ralstonia pickettii 12J 6286083 YP_001898916.1 CDS Rpic_1341 NC_010682.1 1435603 1436850 D KEGG: rso:RSc1459 hypothetical protein; hypothetical protein 1435603..1436850 Ralstonia pickettii 12J 6286084 YP_001898917.1 CDS Rpic_1342 NC_010682.1 1436929 1438059 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1436929..1438059 Ralstonia pickettii 12J 6286649 YP_001898918.1 CDS Rpic_1343 NC_010682.1 1438515 1439462 D PFAM: Fimbrial protein; KEGG: pau:PA14_69760 putative fimbrial protein; Fimbrial protein 1438515..1439462 Ralstonia pickettii 12J 6286650 YP_001898919.1 CDS Rpic_1345 NC_010682.1 1441249 1441716 D KEGG: reu:Reut_B5305 hypothetical protein; hypothetical protein 1441249..1441716 Ralstonia pickettii 12J 6286652 YP_001898920.1 CDS Rpic_1346 NC_010682.1 1441735 1442457 R PFAM: MgtC/SapB transporter; KEGG: rso:RSc1461 putative transporter transmembrane protein; MgtC/SapB transporter complement(1441735..1442457) Ralstonia pickettii 12J 6286117 YP_001898921.1 CDS Rpic_1347 NC_010682.1 1442557 1443660 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: rso:RSc1462 putative signal peptide protein; Male sterility domain complement(1442557..1443660) Ralstonia pickettii 12J 6286118 YP_001898922.1 CDS Rpic_1348 NC_010682.1 1443938 1444969 R PFAM: protein of unknown function DUF182; KEGG: rso:RSc1463 hypothetical protein; hypothetical protein complement(1443938..1444969) Ralstonia pickettii 12J 6286119 YP_001898923.1 CDS Rpic_1349 NC_010682.1 1445027 1445701 R PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rso:RSc1464 probable transmembrane protein; carbon monoxide dehydrogenase subunit G complement(1445027..1445701) Ralstonia pickettii 12J 6286120 YP_001898924.1 CDS Rpic_1350 NC_010682.1 1445692 1446924 R PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: rso:RSc1465 hypothetical protein; VWA containing CoxE family protein complement(1445692..1446924) Ralstonia pickettii 12J 6288580 YP_001898925.1 CDS Rpic_1351 NC_010682.1 1446928 1447824 R PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RSc1466 hypothetical protein; ATPase complement(1446928..1447824) Ralstonia pickettii 12J 6288581 YP_001898926.1 CDS Rpic_1352 NC_010682.1 1447845 1448651 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: rso:RSc1467 probable oxidoreductase protein; molybdopterin dehydrogenase complement(1447845..1448651) Ralstonia pickettii 12J 6288582 YP_001898927.1 CDS Rpic_1353 NC_010682.1 1448666 1451044 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rso:RSc1468 probable oxidoreductase protein; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase complement(1448666..1451044) Ralstonia pickettii 12J 6288583 YP_001898928.1 CDS Rpic_1354 NC_010682.1 1451064 1451591 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rso:RSc1469 putative dehydrogenase oxidoreductase protein; (2Fe-2S)-binding domain-containing protein complement(1451064..1451591) Ralstonia pickettii 12J 6288339 YP_001898929.1 CDS Rpic_1355 NC_010682.1 1451961 1452137 R KEGG: rso:RSc1470 hypothetical protein; hypothetical protein complement(1451961..1452137) Ralstonia pickettii 12J 6288340 YP_001898930.1 CDS Rpic_1356 NC_010682.1 1452300 1452779 R PFAM: CreA family protein; KEGG: rso:RSc1471 putative CreA signal peptide protein; CreA family protein complement(1452300..1452779) Ralstonia pickettii 12J 6288341 YP_001898931.1 CDS Rpic_1357 NC_010682.1 1452813 1453781 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1472 probable transcription regulator protein; LysR family transcriptional regulator complement(1452813..1453781) Ralstonia pickettii 12J 6288342 YP_001898932.1 CDS Rpic_1358 NC_010682.1 1453843 1455396 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1473 putative multidrug resistance-like transmembrane protein; major facilitator superfamily protein 1453843..1455396 Ralstonia pickettii 12J 6286157 YP_001898933.1 CDS Rpic_1359 NC_010682.1 1455670 1458705 R PFAM: glycosyl transferase family 51; KEGG: rso:RSc1476 probable transmembrane protein; glycosyl transferase family protein complement(1455670..1458705) Ralstonia pickettii 12J 6286158 YP_001898934.1 CDS Rpic_1360 NC_010682.1 1458809 1459720 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4117 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1458809..1459720) Ralstonia pickettii 12J 6286159 YP_001898935.1 CDS Rpic_1361 NC_010682.1 1459832 1460941 D TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bmu:Bmul_4960 muconate and chloromuconate cycloisomerase; muconate and chloromuconate cycloisomerase 1459832..1460941 Ralstonia pickettii 12J 6286160 YP_001898936.1 CDS Rpic_1362 NC_010682.1 1460978 1461268 D KEGG: bam:Bamb_6586 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase 1460978..1461268 Ralstonia pickettii 12J 6287920 YP_001898937.1 CDS Rpic_1363 NC_010682.1 1461304 1462239 D TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bmu:Bmul_3237 catechol 1,2-dioxygenase; catechol 1,2-dioxygenase 1461304..1462239 Ralstonia pickettii 12J 6287921 YP_001898938.1 CDS Rpic_1364 NC_010682.1 1462268 1463626 D PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bch:Bcen2424_6524 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1462268..1463626 Ralstonia pickettii 12J 6287922 YP_001898939.1 CDS Rpic_1365 NC_010682.1 1463623 1464111 D KEGG: bch:Bcen2424_6525 2-chlorobenzoate 1,2-dioxygenase; TIGRFAM: benzoate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; benzoate 1,2-dioxygenase small subunit 1463623..1464111 Ralstonia pickettii 12J 6287923 YP_001898940.1 CDS Rpic_1366 NC_010682.1 1464147 1465175 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: bmu:Bmul_3240 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1464147..1465175 Ralstonia pickettii 12J 6286958 YP_001898941.1 CDS benD NC_010682.1 1465172 1465954 D catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 1465172..1465954 Ralstonia pickettii 12J 6286959 YP_001898942.1 CDS Rpic_1368 NC_010682.1 1466055 1467374 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reh:H16_B1919 MFS transporter, AAHS family; major facilitator superfamily protein 1466055..1467374 Ralstonia pickettii 12J 6286960 YP_001898943.1 CDS Rpic_1369 NC_010682.1 1467388 1468584 D TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: bmu:Bmul_5243 benzoate transporter; benzoate transporter 1467388..1468584 Ralstonia pickettii 12J 6286961 YP_001898944.1 CDS Rpic_1370 NC_010682.1 1468652 1468813 R hypothetical protein complement(1468652..1468813) Ralstonia pickettii 12J 6286982 YP_001898945.1 CDS Rpic_1371 NC_010682.1 1469199 1470614 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1469199..1470614 Ralstonia pickettii 12J 6286983 YP_001898946.1 CDS Rpic_1372 NC_010682.1 1470601 1471848 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1470601..1471848 Ralstonia pickettii 12J 6286984 YP_001898947.1 CDS bioD NC_010682.1 1471850 1472557 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1471850..1472557 Ralstonia pickettii 12J 6286985 YP_001898948.1 CDS Rpic_1374 NC_010682.1 1472595 1473113 D KEGG: rso:RSc1480 probable lipoprotein transmembrane; putative transmembrane lipoprotein 1472595..1473113 Ralstonia pickettii 12J 6286440 YP_001898949.1 CDS Rpic_1375 NC_010682.1 1473279 1473803 D KEGG: rso:RSc1481 probable transmembrane protein; hypothetical protein 1473279..1473803 Ralstonia pickettii 12J 6286441 YP_001898950.1 CDS Rpic_1376 NC_010682.1 1473899 1474108 R PFAM: protein of unknown function DUF1653; KEGG: rso:RSc1482 hypothetical protein; hypothetical protein complement(1473899..1474108) Ralstonia pickettii 12J 6286442 YP_001898951.1 CDS Rpic_1377 NC_010682.1 1474116 1474463 R KEGG: rso:RSc1483 hypothetical protein; hypothetical protein complement(1474116..1474463) Ralstonia pickettii 12J 6286443 YP_001898952.1 CDS Rpic_1378 NC_010682.1 1474545 1475540 R PFAM: pyruvate carboxyltransferase; KEGG: aav:Aave_1652 pyruvate carboxyltransferase; pyruvate carboxyltransferase complement(1474545..1475540) Ralstonia pickettii 12J 6286145 YP_001898953.1 CDS Rpic_1379 NC_010682.1 1475626 1476525 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_5234 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1475626..1476525) Ralstonia pickettii 12J 6286146 YP_001898954.1 CDS Rpic_1380 NC_010682.1 1476681 1477886 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_A1234 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 1476681..1477886 Ralstonia pickettii 12J 6286147 YP_001898955.1 CDS Rpic_1381 NC_010682.1 1477901 1479343 D KEGG: ppf:Pput_5022 3-isopropylmalate dehydratase, large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase large subunit 1477901..1479343 Ralstonia pickettii 12J 6286148 YP_001898956.1 CDS Rpic_1382 NC_010682.1 1479330 1479977 D KEGG: reh:H16_A1237 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 1479330..1479977 Ralstonia pickettii 12J 6288358 YP_001898957.1 CDS Rpic_1383 NC_010682.1 1480034 1481371 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: acr:Acry_0452 major facilitator superfamily MFS_1; major facilitator superfamily protein 1480034..1481371 Ralstonia pickettii 12J 6288359 YP_001898958.1 CDS Rpic_1385 NC_010682.1 1481859 1482248 R KEGG: mms:mma_1788 uncharacterized conserved protein (phage related); hypothetical protein complement(1481859..1482248) Ralstonia pickettii 12J 6288361 YP_001898959.1 CDS Rpic_1386 NC_010682.1 1482365 1482565 D hypothetical protein 1482365..1482565 Ralstonia pickettii 12J 6289822 YP_001898960.1 CDS Rpic_1387 NC_010682.1 1482565 1482738 D hypothetical protein 1482565..1482738 Ralstonia pickettii 12J 6289823 YP_001898961.1 CDS Rpic_1388 NC_010682.1 1482738 1482848 D hypothetical protein 1482738..1482848 Ralstonia pickettii 12J 6289824 YP_001898962.1 CDS Rpic_1389 NC_010682.1 1482848 1483945 D PFAM: replication initiation factor; KEGG: aav:Aave_2390 replication initiation factor; replication initiation factor 1482848..1483945 Ralstonia pickettii 12J 6289825 YP_001898963.1 CDS Rpic_1390 NC_010682.1 1483918 1484253 D KEGG: neu:NE0889 hypothetical protein; hypothetical protein 1483918..1484253 Ralstonia pickettii 12J 6286637 YP_001898964.1 CDS Rpic_1391 NC_010682.1 1484250 1484465 D hypothetical protein 1484250..1484465 Ralstonia pickettii 12J 6286638 YP_001898965.1 CDS Rpic_1392 NC_010682.1 1484480 1484728 D KEGG: pae:PA0723 coat protein B of bacteriophage Pf1); hypothetical protein 1484480..1484728 Ralstonia pickettii 12J 6286639 YP_001898966.1 CDS Rpic_1393 NC_010682.1 1484799 1486208 D KEGG: mmu:239611 mucin 19; hypothetical protein 1484799..1486208 Ralstonia pickettii 12J 6286640 YP_001898967.1 CDS Rpic_1394 NC_010682.1 1486217 1486525 D hypothetical protein 1486217..1486525 Ralstonia pickettii 12J 6288549 YP_001898968.1 CDS Rpic_1395 NC_010682.1 1486522 1487577 D PFAM: Zonular occludens toxin; KEGG: ajs:Ajs_0719 zonular occludens toxin; Zonular occludens toxin 1486522..1487577 Ralstonia pickettii 12J 6288550 YP_001898969.1 CDS Rpic_1396 NC_010682.1 1487698 1487994 R hypothetical protein complement(1487698..1487994) Ralstonia pickettii 12J 6288551 YP_001898970.1 CDS Rpic_1397 NC_010682.1 1488657 1489679 R KEGG: rso:RS05555 hypothetical protein; hypothetical protein complement(1488657..1489679) Ralstonia pickettii 12J 6288552 YP_001898971.1 CDS Rpic_1398 NC_010682.1 1490138 1490632 R PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bte:BTH_I3270 hypothetical protein; HMG-I and HMG-Y DNA-binding domain-containing protein complement(1490138..1490632) Ralstonia pickettii 12J 6286569 YP_001898972.1 CDS Rpic_1399 NC_010682.1 1490718 1491866 R PFAM: Zonular occludens toxin; KEGG: pmy:Pmen_2112 zonular occludens toxin; Zonular occludens toxin complement(1490718..1491866) Ralstonia pickettii 12J 6286570 YP_001898973.1 CDS Rpic_1400 NC_010682.1 1491874 1492194 R KEGG: bpd:BURPS668_3910 ABC-type Co2+ transport system, permease component; Co2+ ABC transporter permease complement(1491874..1492194) Ralstonia pickettii 12J 6286571 YP_001898974.1 CDS Rpic_1401 NC_010682.1 1492195 1493661 R KEGG: cel:F59A6.3 F59A6.3; hypothetical protein complement(1492195..1493661) Ralstonia pickettii 12J 6286572 YP_001898975.1 CDS Rpic_1402 NC_010682.1 1493805 1494008 R KEGG: xft:PD0925 hypothetical protein; hypothetical protein complement(1493805..1494008) Ralstonia pickettii 12J 6286719 YP_001898976.1 CDS Rpic_1403 NC_010682.1 1494013 1494246 R hypothetical protein complement(1494013..1494246) Ralstonia pickettii 12J 6286720 YP_001898977.1 CDS Rpic_1404 NC_010682.1 1494246 1494554 R hypothetical protein complement(1494246..1494554) Ralstonia pickettii 12J 6286721 YP_001898978.1 CDS Rpic_1405 NC_010682.1 1494605 1494967 R hypothetical protein complement(1494605..1494967) Ralstonia pickettii 12J 6286722 YP_001898979.1 CDS Rpic_1406 NC_010682.1 1495534 1496745 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2563 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein complement(1495534..1496745) Ralstonia pickettii 12J 6288553 YP_001898980.1 CDS Rpic_1407 NC_010682.1 1496865 1497827 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bvi:Bcep1808_4035 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 1496865..1497827 Ralstonia pickettii 12J 6288554 YP_001898981.1 CDS Rpic_1408 NC_010682.1 1497831 1498769 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_4505 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1497831..1498769) Ralstonia pickettii 12J 6288555 YP_001898982.1 CDS Rpic_1409 NC_010682.1 1498966 1500270 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_4506 major facilitator superfamily MFS_1; major facilitator superfamily protein 1498966..1500270 Ralstonia pickettii 12J 6288556 YP_001898983.1 CDS Rpic_1410 NC_010682.1 1500306 1501520 D KEGG: rme:Rmet_4507 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1500306..1501520 Ralstonia pickettii 12J 6286153 YP_001898984.1 CDS Rpic_1411 NC_010682.1 1501541 1503016 D PFAM: Amidase; KEGG: pap:PSPA7_4912 amidase family protein; amidase 1501541..1503016 Ralstonia pickettii 12J 6286154 YP_001898985.1 CDS Rpic_1412 NC_010682.1 1503005 1503400 R KEGG: mex:Mext_1680 LysR substrate-binding; LysR substrate-binding complement(1503005..1503400) Ralstonia pickettii 12J 6286155 YP_001898986.1 CDS Rpic_1413 NC_010682.1 1503517 1503999 D KEGG: sal:Sala_0365 (acyl-carrier protein) phosphodiesterase; hypothetical protein 1503517..1503999 Ralstonia pickettii 12J 6286156 YP_001898987.1 CDS Rpic_1414 NC_010682.1 1503996 1504850 R PFAM: metallophosphoesterase; KEGG: rso:RSc1795 hypothetical protein; metallophosphoesterase complement(1503996..1504850) Ralstonia pickettii 12J 6287955 YP_001898988.1 CDS Rpic_1415 NC_010682.1 1504850 1505911 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc1794 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(1504850..1505911) Ralstonia pickettii 12J 6287956 YP_001898989.1 CDS Rpic_1416 NC_010682.1 1505908 1506705 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1793 probable permease transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein complement(1505908..1506705) Ralstonia pickettii 12J 6287957 YP_001898990.1 CDS Rpic_1417 NC_010682.1 1506702 1507553 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1792 probable transport system permease transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein complement(1506702..1507553) Ralstonia pickettii 12J 6287958 YP_001898991.1 CDS Rpic_1418 NC_010682.1 1507556 1508587 R PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1791 probable solute-binding periplasmic (PBP) ABC transporter protein; family 1 extracellular solute-binding protein complement(1507556..1508587) Ralstonia pickettii 12J 6288481 YP_001898992.1 CDS Rpic_1419 NC_010682.1 1508584 1509654 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1790 probable transcription regulator protein; LacI family transcriptional regulator complement(1508584..1509654) Ralstonia pickettii 12J 6288482 YP_001898993.1 CDS Rpic_1420 NC_010682.1 1509896 1511200 D PFAM: protein of unknown function DUF323; KEGG: rso:RSc1789 hypothetical protein; hypothetical protein 1509896..1511200 Ralstonia pickettii 12J 6288483 YP_001898994.1 CDS Rpic_1421 NC_010682.1 1511253 1512107 R PFAM: Ankyrin; KEGG: rso:RSc1788 probable ankyrin repeat harboring signal peptide protein; ankyrin complement(1511253..1512107) Ralstonia pickettii 12J 6288484 YP_001898995.1 CDS Rpic_1422 NC_010682.1 1512091 1512894 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: rso:RSc1787 hypothetical protein; TatD family hydrolase complement(1512091..1512894) Ralstonia pickettii 12J 6289300 YP_001898996.1 CDS Rpic_1423 NC_010682.1 1512947 1513366 R PFAM: type IV pilus assembly PilZ; KEGG: rso:RSc1786 putative type 4 fimbrial biogenesis protein; type IV pilus assembly PilZ complement(1512947..1513366) Ralstonia pickettii 12J 6289301 YP_001898997.1 CDS Rpic_1424 NC_010682.1 1513409 1514419 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(1513409..1514419) Ralstonia pickettii 12J 6289302 YP_001898998.1 CDS tmk NC_010682.1 1514501 1515118 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(1514501..1515118) Ralstonia pickettii 12J 6289303 YP_001898999.1 CDS Rpic_1426 NC_010682.1 1515115 1516113 R PFAM: aminodeoxychorismate lyase; KEGG: rso:RSc1783 hypothetical protein; aminodeoxychorismate lyase complement(1515115..1516113) Ralstonia pickettii 12J 6287661 YP_001899000.1 CDS Rpic_1427 NC_010682.1 1516246 1517286 D TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: rso:RSc1782 hypothetical protein; folate-binding protein YgfZ 1516246..1517286 Ralstonia pickettii 12J 6287662 YP_001899001.1 CDS Rpic_1428 NC_010682.1 1517300 1517590 D KEGG: rso:RSc1781 hypothetical protein; hypothetical protein 1517300..1517590 Ralstonia pickettii 12J 6287663 YP_001899002.1 CDS Rpic_1429 NC_010682.1 1517719 1518534 D PFAM: protein of unknown function DUF833; KEGG: rso:RSc1780 putative signal peptide protein; hypothetical protein 1517719..1518534 Ralstonia pickettii 12J 6287664 YP_001899003.1 CDS Rpic_1430 NC_010682.1 1518546 1519448 R PFAM: fatty acid hydroxylase; KEGG: reu:Reut_A2772 putative sterol desaturase; fatty acid hydroxylase complement(1518546..1519448) Ralstonia pickettii 12J 6289563 YP_001899004.1 CDS Rpic_1431 NC_010682.1 1519547 1520452 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A2771 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 1519547..1520452 Ralstonia pickettii 12J 6289564 YP_001899005.1 CDS Rpic_1432 NC_010682.1 1520442 1520894 R PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc1774 hypothetical protein; N-acetyltransferase GCN5 complement(1520442..1520894) Ralstonia pickettii 12J 6289565 YP_001899006.1 CDS Rpic_1433 NC_010682.1 1520904 1521353 R PFAM: thioesterase superfamily protein; KEGG: rso:RSc1773 putative thioesterase protein; thioesterase superfamily protein complement(1520904..1521353) Ralstonia pickettii 12J 6289566 YP_001899007.1 CDS Rpic_1434 NC_010682.1 1521368 1522348 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rso:RSc1772 probable esterase/lipase protein; alpha/beta hydrolase complement(1521368..1522348) Ralstonia pickettii 12J 6286219 YP_001899008.1 CDS Rpic_1435 NC_010682.1 1522458 1523606 D PFAM: iron-containing alcohol dehydrogenase; KEGG: rso:RSc1771 probable NAD-dependent 4-hydroxybutyrate dehydrogenase oxidoreductase protein; alcohol dehydrogenase 1522458..1523606 Ralstonia pickettii 12J 6286220 YP_001899009.1 CDS Rpic_1436 NC_010682.1 1523616 1524542 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc1770 probable hydrolase protein; alpha/beta hydrolase fold protein complement(1523616..1524542) Ralstonia pickettii 12J 6286221 YP_001899010.1 CDS Rpic_1437 NC_010682.1 1524579 1525481 R probable dehydrogenase; hypothetical protein complement(1524579..1525481) Ralstonia pickettii 12J 6286222 YP_001899011.1 CDS Rpic_1438 NC_010682.1 1525538 1526494 R PFAM: Glutathione S-transferase domain; KEGG: rso:RSc1768 putative glutathione S-transferase-related protein; glutathione S-transferase domain-containing protein complement(1525538..1526494) Ralstonia pickettii 12J 6289124 YP_001899012.1 CDS Rpic_1439 NC_010682.1 1526522 1527370 R PFAM: class II aldolase/adducin family protein; KEGG: rme:Rmet_1848 hypothetical protein; hypothetical protein complement(1526522..1527370) Ralstonia pickettii 12J 6289125 YP_001899013.1 CDS Rpic_1440 NC_010682.1 1527468 1528478 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: rso:RSc1766 probable NADP-dependent oxidoreductase oxidoreductase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(1527468..1528478) Ralstonia pickettii 12J 6289126 YP_001899014.1 CDS Rpic_1441 NC_010682.1 1528523 1529926 R PFAM: beta-lactamase; KEGG: rso:RSc1765 probable 6-aminohexanoate-dimer hydrolase lipoprotein; 6-aminohexanoate-dimer hydrolase complement(1528523..1529926) Ralstonia pickettii 12J 6289127 YP_001899015.1 CDS Rpic_1442 NC_010682.1 1530008 1530442 R PFAM: thioesterase superfamily protein; KEGG: rso:RSc1764 hypothetical protein; thioesterase superfamily protein complement(1530008..1530442) Ralstonia pickettii 12J 6286731 YP_001899016.1 CDS Rpic_1443 NC_010682.1 1530475 1531257 R Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase complement(1530475..1531257) Ralstonia pickettii 12J 6286732 YP_001899017.1 CDS Rpic_1444 NC_010682.1 1531295 1533163 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rso:RSc1762 probable acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(1531295..1533163) Ralstonia pickettii 12J 6286733 YP_001899018.1 CDS Rpic_1445 NC_010682.1 1533473 1534651 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1533473..1534651) Ralstonia pickettii 12J 6286734 YP_001899019.1 CDS Rpic_1446 NC_010682.1 1534710 1535351 R PFAM: isochorismatase hydrolase; KEGG: rso:RSc1760 probable bifunctional protein: pyrazinamidase and nicotinamidase hydrolase (nicotine deamidase); nicotinamidase complement(1534710..1535351) Ralstonia pickettii 12J 6286243 YP_001899020.1 CDS Rpic_1447 NC_010682.1 1535391 1537472 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rso:RSc1759 probable trifunctional: enoyl-CoA hydratase and delta3-cis-delta2-trans-enoyl-CoA isomerase and 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein; NAD-binding 3-hydroxyacyl-CoA dehydrogenase complement(1535391..1537472) Ralstonia pickettii 12J 6286244 YP_001899021.1 CDS Rpic_1448 NC_010682.1 1537832 1539367 D PFAM: amino acid permease-associated region; KEGG: rso:RSc1758 probable lysine-specific permease transmembrane protein; amino acid permease-associated protein 1537832..1539367 Ralstonia pickettii 12J 6286245 YP_001899022.1 CDS Rpic_1449 NC_010682.1 1539448 1540971 D PFAM: amino acid permease-associated region; KEGG: rso:RSc1757 probable lysine-specific permease transmembrane protein; amino acid permease-associated protein 1539448..1540971 Ralstonia pickettii 12J 6286246 YP_001899023.1 CDS Rpic_1450 NC_010682.1 1541041 1541760 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1754 probable amino-acid ATP-binding ABC transporter protein; ABC transporter-like protein complement(1541041..1541760) Ralstonia pickettii 12J 6286613 YP_001899024.1 CDS Rpic_1451 NC_010682.1 1541760 1542560 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1753 probable amino-acid ATP-binding ABC transporter protein; ABC transporter-like protein complement(1541760..1542560) Ralstonia pickettii 12J 6286614 YP_001899025.1 CDS Rpic_1452 NC_010682.1 1542557 1543891 R PFAM: inner-membrane translocator; KEGG: rso:RSc1752 probable amino acid transport system permease lipoprotein transmembrane; inner-membrane translocator complement(1542557..1543891) Ralstonia pickettii 12J 6286615 YP_001899026.1 CDS Rpic_1453 NC_010682.1 1543892 1544884 R PFAM: inner-membrane translocator; KEGG: rso:RSc1751 putative amino acid transmembrane transmembrane protein; inner-membrane translocator complement(1543892..1544884) Ralstonia pickettii 12J 6286616 YP_001899027.1 CDS Rpic_1454 NC_010682.1 1544966 1546222 R KEGG: rso:RSc1750 probable Leu/Ile/Val-binding precursor signal peptide protein; putative Leu/Ile/Val-binding signal peptide protein complement(1544966..1546222) Ralstonia pickettii 12J 6286697 YP_001899028.1 CDS Rpic_1455 NC_010682.1 1546442 1548070 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(1546442..1548070) Ralstonia pickettii 12J 6286698 YP_001899029.1 CDS Rpic_1456 NC_010682.1 1548415 1550004 D PFAM: protein of unknown function UPF0061; KEGG: rso:RSc1748 hypothetical protein; hypothetical protein 1548415..1550004 Ralstonia pickettii 12J 6286699 YP_001899030.1 CDS Rpic_1457 NC_010682.1 1550162 1550548 D this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1550162..1550548 Ralstonia pickettii 12J 6286700 YP_001899031.1 CDS Rpic_1458 NC_010682.1 1550597 1551169 D Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 1550597..1551169 Ralstonia pickettii 12J 6289159 YP_001899032.1 CDS Rpic_1459 NC_010682.1 1551169 1551441 D PFAM: BolA family protein; KEGG: rso:RSc1745 hypothetical protein; BolA family protein 1551169..1551441 Ralstonia pickettii 12J 6289160 YP_001899033.1 CDS Rpic_1460 NC_010682.1 1551484 1552281 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rso:RSc1744 putative isomerase rotamase signal peptide protein; PpiC-type peptidyl-prolyl cis-trans isomerase 1551484..1552281 Ralstonia pickettii 12J 6289161 YP_001899034.1 CDS Rpic_1461 NC_010682.1 1552573 1553553 D PFAM: protein of unknown function DUF534; KEGG: rso:RSc1740 hypothetical signal peptide protein; hypothetical protein 1552573..1553553 Ralstonia pickettii 12J 6289162 YP_001899035.1 CDS Rpic_1462 NC_010682.1 1553729 1554637 D PFAM: inner-membrane translocator; KEGG: rso:RSc1739 putative transmembrane ABC transporter protein; inner-membrane translocator 1553729..1554637 Ralstonia pickettii 12J 6286831 YP_001899036.1 CDS Rpic_1463 NC_010682.1 1554639 1555433 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1738 probable ATP-binding ABC transporter protein; ABC transporter-like protein 1554639..1555433 Ralstonia pickettii 12J 6286832 YP_001899037.1 CDS Rpic_1464 NC_010682.1 1555533 1556633 D KEGG: bur:Bcep18194_B3003 hypothetical protein; hypothetical protein 1555533..1556633 Ralstonia pickettii 12J 6286833 YP_001899038.1 CDS Rpic_1467 NC_010682.1 1559132 1560220 D KEGG: rso:RSc1734 probable ATP-binding ABC transporter protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1559132..1560220 Ralstonia pickettii 12J 6287869 YP_001899039.1 CDS Rpic_1468 NC_010682.1 1560292 1561332 D PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1733 putative lipoprotein signal peptide; family 1 extracellular solute-binding protein 1560292..1561332 Ralstonia pickettii 12J 6287870 YP_001899040.1 CDS Rpic_1469 NC_010682.1 1561436 1562704 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1732 probable transport system permease transmembrane protein; binding-protein-dependent transport system inner membrane protein 1561436..1562704 Ralstonia pickettii 12J 6287871 YP_001899041.1 CDS Rpic_1470 NC_010682.1 1562721 1563557 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1731 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1562721..1563557 Ralstonia pickettii 12J 6289045 YP_001899042.1 CDS Rpic_1471 NC_010682.1 1563798 1564382 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc1730 probable dehydrogenase/reductase oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(1563798..1564382) Ralstonia pickettii 12J 6289046 YP_001899043.1 CDS Rpic_1472 NC_010682.1 1564454 1565260 R PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4; transposase IS4 family protein complement(1564454..1565260) Ralstonia pickettii 12J 6289047 YP_001899044.1 CDS Rpic_1473 NC_010682.1 1565260 1565421 R KEGG: rso:RSc1730 probable dehydrogenase/reductase oxidoreductase protein; putative dehydrogenase/reductase oxidoreductase protein complement(1565260..1565421) Ralstonia pickettii 12J 6289048 YP_001899045.1 CDS Rpic_1474 NC_010682.1 1565553 1566479 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1729 probable transcription regulator protein; LysR family transcriptional regulator 1565553..1566479 Ralstonia pickettii 12J 6287528 YP_001899046.1 CDS Rpic_1475 NC_010682.1 1566489 1567382 R PFAM: extracellular solute-binding protein family 3; KEGG: reu:Reut_A1127 extracellular solute-binding protein, family 3; family 3 extracellular solute-binding protein complement(1566489..1567382) Ralstonia pickettii 12J 6287529 YP_001899047.1 CDS Rpic_1476 NC_010682.1 1567653 1570682 R PFAM: transposase Tn3 family protein; KEGG: pap:PSPA7_5340 transposase; transposase Tn3 family protein complement(1567653..1570682) Ralstonia pickettii 12J 6287530 YP_001899048.1 CDS Rpic_1477 NC_010682.1 1570679 1571272 R PFAM: Resolvase domain; KEGG: pap:PSPA7_5339 DNA-invertase; resolvase domain-containing protein complement(1570679..1571272) Ralstonia pickettii 12J 6287531 YP_001899049.1 CDS Rpic_1478 NC_010682.1 1571511 1571789 D KEGG: rme:Rmet_6342 hypothetical protein; hypothetical protein 1571511..1571789 Ralstonia pickettii 12J 6287129 YP_001899050.1 CDS Rpic_1479 NC_010682.1 1571786 1572070 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: rme:Rmet_6341 addiction module toxin, RelE/StbE; RelE/StbE family addiction module toxin 1571786..1572070 Ralstonia pickettii 12J 6287130 YP_001899051.1 CDS Rpic_1480 NC_010682.1 1572477 1573037 D KEGG: rme:Rmet_6340 hypothetical protein; hypothetical protein 1572477..1573037 Ralstonia pickettii 12J 6287131 YP_001899052.1 CDS Rpic_1481 NC_010682.1 1573171 1573527 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: rme:Rmet_6339 cupin 2, conserved barrel; cupin 1573171..1573527 Ralstonia pickettii 12J 6287132 YP_001899053.1 CDS Rpic_1482 NC_010682.1 1574022 1574840 D PFAM: copper resistance B precursor; KEGG: pae:PA2064 copper resistance protein B precursor; copper resistance B 1574022..1574840 Ralstonia pickettii 12J 6286400 YP_001899054.1 CDS Rpic_1483 NC_010682.1 1575014 1575427 D KEGG: rme:Rmet_5976 hypothetical protein; hypothetical protein 1575014..1575427 Ralstonia pickettii 12J 6286401 YP_001899055.1 CDS Rpic_1484 NC_010682.1 1575455 1575718 R hypothetical protein complement(1575455..1575718) Ralstonia pickettii 12J 6286402 YP_001899056.1 CDS Rpic_1485 NC_010682.1 1575740 1577269 R PFAM: transposase IS66; KEGG: bxe:Bxe_B1865 transposase IS66 family; transposase IS66 complement(1575740..1577269) Ralstonia pickettii 12J 6286403 YP_001899057.1 CDS Rpic_1486 NC_010682.1 1577332 1577622 R PFAM: IS66 Orf2 family protein; KEGG: ajs:Ajs_2917 IS66 Orf2 family protein; IS66 Orf2 family protein complement(1577332..1577622) Ralstonia pickettii 12J 6286538 YP_001899058.1 CDS Rpic_1487 NC_010682.1 1577664 1577951 R KEGG: bxe:Bxe_B1867 hypothetical protein; hypothetical protein complement(1577664..1577951) Ralstonia pickettii 12J 6286539 YP_001899059.1 CDS Rpic_1488 NC_010682.1 1578270 1578677 R hypothetical protein complement(1578270..1578677) Ralstonia pickettii 12J 6286540 YP_001899060.1 CDS Rpic_1489 NC_010682.1 1578756 1579205 R PFAM: GtrA family protein; KEGG: rme:Rmet_6129 GtrA-like protein; GtrA family protein complement(1578756..1579205) Ralstonia pickettii 12J 6286541 YP_001899061.1 CDS Rpic_1490 NC_010682.1 1579275 1580141 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rme:Rmet_6131 methyltransferase type 11; type 11 methyltransferase complement(1579275..1580141) Ralstonia pickettii 12J 6289240 YP_001899062.1 CDS Rpic_1491 NC_010682.1 1580680 1581738 R KEGG: pna:Pnap_1393 ISXo7 transposase; ISXo7 transposase complement(1580680..1581738) Ralstonia pickettii 12J 6289241 YP_001899063.1 CDS Rpic_1492 NC_010682.1 1582152 1582967 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A1608 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 1582152..1582967 Ralstonia pickettii 12J 6289242 YP_001899064.1 CDS Rpic_1493 NC_010682.1 1583088 1583735 R KEGG: bmu:Bmul_5776 hypothetical protein; hypothetical protein complement(1583088..1583735) Ralstonia pickettii 12J 6289243 YP_001899065.1 CDS Rpic_1494 NC_010682.1 1583704 1584681 R KEGG: bmu:Bmul_5777 hypothetical protein; hypothetical protein complement(1583704..1584681) Ralstonia pickettii 12J 6286653 YP_001899066.1 CDS Rpic_1495 NC_010682.1 1584708 1586681 R KEGG: bmu:Bmul_5778 integrase catalytic region; Integrase catalytic subunit complement(1584708..1586681) Ralstonia pickettii 12J 6286654 YP_001899067.1 CDS Rpic_1496 NC_010682.1 1586681 1587319 R KEGG: bmu:Bmul_5779 hypothetical protein; hypothetical protein complement(1586681..1587319) Ralstonia pickettii 12J 6286655 YP_001899068.1 CDS Rpic_1497 NC_010682.1 1587723 1588568 D KEGG: pna:Pnap_4761 mucin-associated surface protein; mucin-associated surface protein 1587723..1588568 Ralstonia pickettii 12J 6286656 YP_001899069.1 CDS Rpic_1498 NC_010682.1 1588673 1589623 D KEGG: mmr:Mmar10_3077 GumN family protein; hypothetical protein 1588673..1589623 Ralstonia pickettii 12J 6286352 YP_001899070.1 CDS Rpic_1499 NC_010682.1 1589635 1590489 D hypothetical protein 1589635..1590489 Ralstonia pickettii 12J 6286353 YP_001899071.1 CDS Rpic_1500 NC_010682.1 1590609 1591001 D PFAM: histone family protein DNA-binding protein; KEGG: reu:Reut_C5992 histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 1590609..1591001 Ralstonia pickettii 12J 6286354 YP_001899072.1 CDS Rpic_1501 NC_010682.1 1591087 1591848 D hypothetical protein 1591087..1591848 Ralstonia pickettii 12J 6286355 YP_001899073.1 CDS Rpic_1502 NC_010682.1 1591993 1592718 R KEGG: atc:AGR_pTi_214 hypothetical protein; hypothetical protein complement(1591993..1592718) Ralstonia pickettii 12J 6286898 YP_001899074.1 CDS Rpic_1503 NC_010682.1 1593108 1595507 R PFAM: restriction endonuclease; KEGG: gme:Gmet_1797 DNA topoisomerase I:restriction endonuclease; restriction endonuclease complement(1593108..1595507) Ralstonia pickettii 12J 6286899 YP_001899075.1 CDS Rpic_1504 NC_010682.1 1595524 1596378 R hypothetical protein complement(1595524..1596378) Ralstonia pickettii 12J 6286900 YP_001899076.1 CDS Rpic_1505 NC_010682.1 1596433 1596618 R hypothetical protein complement(1596433..1596618) Ralstonia pickettii 12J 6286901 YP_001899077.1 CDS Rpic_1506 NC_010682.1 1596615 1597202 R KEGG: vvy:VVA0688 hypothetical protein; hypothetical protein complement(1596615..1597202) Ralstonia pickettii 12J 6286950 YP_001899078.1 CDS Rpic_1507 NC_010682.1 1597420 1599534 D PFAM: integrase family protein; KEGG: rme:Rmet_6086 phage integrase; integrase family protein 1597420..1599534 Ralstonia pickettii 12J 6286951 YP_001899079.1 CDS Rpic_1508 NC_010682.1 1600253 1600951 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bch:Bcen2424_6193 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 1600253..1600951 Ralstonia pickettii 12J 6286952 YP_001899080.1 CDS Rpic_1509 NC_010682.1 1600944 1602020 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bam:Bamb_6001 ParB-like partition proteins; parB-like partition protein 1600944..1602020 Ralstonia pickettii 12J 6286953 YP_001899081.1 CDS Rpic_1510 NC_010682.1 1602990 1604297 D KEGG: bmu:Bmul_6162 hypothetical protein; hypothetical protein 1602990..1604297 Ralstonia pickettii 12J 6286550 YP_001899082.1 CDS Rpic_1511 NC_010682.1 1604302 1606023 R PFAM: UvrD/REP helicase; KEGG: rme:Rmet_6314 UvrD/REP helicase; UvrD/REP helicase complement(1604302..1606023) Ralstonia pickettii 12J 6286551 YP_001899083.1 CDS Rpic_1512 NC_010682.1 1606131 1606604 R KEGG: bmu:Bmul_5587 hypothetical protein; hypothetical protein complement(1606131..1606604) Ralstonia pickettii 12J 6286552 YP_001899084.1 CDS Rpic_1513 NC_010682.1 1606741 1607085 R PFAM: flagellar transcriptional activator; KEGG: rso:RSp1413 transcriptional activator FlhD; flagellar transcriptional activator complement(1606741..1607085) Ralstonia pickettii 12J 6286553 YP_001899085.1 CDS Rpic_1514 NC_010682.1 1607192 1608058 R KEGG: rme:Rmet_6313 hypothetical protein; hypothetical protein complement(1607192..1608058) Ralstonia pickettii 12J 6288226 YP_001899086.1 CDS Rpic_1515 NC_010682.1 1608118 1608735 R KEGG: rme:Rmet_6312 hypothetical protein; hypothetical protein complement(1608118..1608735) Ralstonia pickettii 12J 6288227 YP_001899087.1 CDS Rpic_1516 NC_010682.1 1608735 1608983 R KEGG: bmu:Bmul_5615 hypothetical protein; hypothetical protein complement(1608735..1608983) Ralstonia pickettii 12J 6288228 YP_001899088.1 CDS Rpic_1517 NC_010682.1 1608955 1609461 R KEGG: rme:Rmet_6310 hypothetical protein; hypothetical protein complement(1608955..1609461) Ralstonia pickettii 12J 6288229 YP_001899089.1 CDS Rpic_1518 NC_010682.1 1609469 1611325 R KEGG: rme:Rmet_6309 hypothetical protein; hypothetical protein complement(1609469..1611325) Ralstonia pickettii 12J 6289381 YP_001899090.1 CDS Rpic_1519 NC_010682.1 1611322 1612584 R KEGG: rme:Rmet_6308 hypothetical protein; hypothetical protein complement(1611322..1612584) Ralstonia pickettii 12J 6289382 YP_001899091.1 CDS Rpic_1520 NC_010682.1 1612589 1613659 R KEGG: rme:Rmet_6307 hypothetical protein; hypothetical protein complement(1612589..1613659) Ralstonia pickettii 12J 6289383 YP_001899092.1 CDS Rpic_1521 NC_010682.1 1613671 1614462 R KEGG: rme:Rmet_6306 hypothetical protein; hypothetical protein complement(1613671..1614462) Ralstonia pickettii 12J 6289384 YP_001899093.1 CDS Rpic_1522 NC_010682.1 1614519 1616966 R KEGG: rme:Rmet_6305 type IV secretory pathway VirB4 components-like protein; type IV secretory pathway VirB4 components-like protein complement(1614519..1616966) Ralstonia pickettii 12J 6289223 YP_001899094.1 CDS Rpic_1523 NC_010682.1 1616960 1617289 R KEGG: rme:Rmet_6304 hypothetical protein; hypothetical protein complement(1616960..1617289) Ralstonia pickettii 12J 6289224 YP_001899095.1 CDS Rpic_1524 NC_010682.1 1617292 1617636 R KEGG: bmu:Bmul_5607 hypothetical protein; hypothetical protein complement(1617292..1617636) Ralstonia pickettii 12J 6289225 YP_001899096.1 CDS Rpic_1525 NC_010682.1 1617649 1618698 R PFAM: type II secretion system protein E; KEGG: rme:Rmet_6302 type II secretion system protein E; type II secretion system protein E complement(1617649..1618698) Ralstonia pickettii 12J 6289226 YP_001899097.1 CDS Rpic_1526 NC_010682.1 1619120 1619833 D KEGG: rme:Rmet_6301 hypothetical protein; hypothetical protein 1619120..1619833 Ralstonia pickettii 12J 6289723 YP_001899098.1 CDS Rpic_1527 NC_010682.1 1619830 1620711 D PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: rme:Rmet_6300 conjugal transfer protein TrbG/VirB9/CagX; conjugal transfer protein TrbG 1619830..1620711 Ralstonia pickettii 12J 6289724 YP_001899099.1 CDS Rpic_1528 NC_010682.1 1620722 1621933 D PFAM: conjugation TrbI family protein; KEGG: rme:Rmet_6299 conjugation TrbI-like protein; conjugation TrbI family protein 1620722..1621933 Ralstonia pickettii 12J 6289725 YP_001899100.1 CDS Rpic_1529 NC_010682.1 1621953 1622726 D KEGG: rme:Rmet_6298 hypothetical protein; hypothetical protein 1621953..1622726 Ralstonia pickettii 12J 6289726 YP_001899101.1 CDS Rpic_1530 NC_010682.1 1622723 1623973 D KEGG: rme:Rmet_6297 hypothetical protein; hypothetical protein 1622723..1623973 Ralstonia pickettii 12J 6289503 YP_001899102.1 CDS Rpic_1531 NC_010682.1 1623970 1624446 D PFAM: Lytic transglycosylase catalytic; KEGG: bmu:Bmul_5550 lytic transglycosylase catalytic; lytic transglycosylase catalytic subunit 1623970..1624446 Ralstonia pickettii 12J 6289504 YP_001899103.1 CDS Rpic_1532 NC_010682.1 1624464 1624988 D KEGG: bvi:Bcep1808_7062 hypothetical protein; hypothetical protein 1624464..1624988 Ralstonia pickettii 12J 6289505 YP_001899104.1 CDS Rpic_1533 NC_010682.1 1624985 1626676 D KEGG: gox:GOX2625 PilN; PilN 1624985..1626676 Ralstonia pickettii 12J 6289506 YP_001899105.1 CDS Rpic_1534 NC_010682.1 1626689 1627399 D KEGG: azc:AZC_3265 putative transcriptional regulatory protein; hypothetical protein 1626689..1627399 Ralstonia pickettii 12J 6289487 YP_001899106.1 CDS Rpic_1535 NC_010682.1 1627401 1628654 D KEGG: bam:Bamb_5879 PilO; putative type IV pilus biosynthesis protein; hypothetical protein 1627401..1628654 Ralstonia pickettii 12J 6289488 YP_001899107.1 CDS Rpic_1536 NC_010682.1 1628656 1630242 D PFAM: type II secretion system protein E; KEGG: gox:GOX2628 nucleotide binding protein PilQ; type II secretion system protein E 1628656..1630242 Ralstonia pickettii 12J 6289489 YP_001899108.1 CDS Rpic_1537 NC_010682.1 1630239 1631312 D PFAM: type II secretion system protein; KEGG: bmn:BMA10247_A0662 type IV pilus biogenesis protein; type II secretion system protein 1630239..1631312 Ralstonia pickettii 12J 6289490 YP_001899109.1 CDS Rpic_1538 NC_010682.1 1631349 1631849 D KEGG: pol:Bpro_5446 putative type IV pilus biogenesis protein; hypothetical protein 1631349..1631849 Ralstonia pickettii 12J 6289523 YP_001899110.1 CDS Rpic_1539 NC_010682.1 1631872 1632348 D KEGG: xau:Xaut_1869 FAD linked oxidase domain protein; hypothetical protein 1631872..1632348 Ralstonia pickettii 12J 6289524 YP_001899111.1 CDS Rpic_1540 NC_010682.1 1632361 1633659 D KEGG: ypi:YpsIP31758_B0021 type IV pilus biogenesis protein PilV; hypothetical protein 1632361..1633659 Ralstonia pickettii 12J 6289525 YP_001899112.1 CDS Rpic_1541 NC_010682.1 1633672 1634313 D KEGG: bvi:Bcep1808_7070 hypothetical protein; hypothetical protein 1633672..1634313 Ralstonia pickettii 12J 6289526 YP_001899113.1 CDS Rpic_1542 NC_010682.1 1634421 1635404 R PFAM: SCP-like extracellular; KEGG: bvi:Bcep1808_7071 allergen V5/TPX-1 related; hypothetical protein complement(1634421..1635404) Ralstonia pickettii 12J 6286526 YP_001899114.1 CDS Rpic_1543 NC_010682.1 1635553 1635996 R hypothetical protein complement(1635553..1635996) Ralstonia pickettii 12J 6286527 YP_001899115.1 CDS Rpic_1544 NC_010682.1 1636107 1636466 R hypothetical protein complement(1636107..1636466) Ralstonia pickettii 12J 6286528 YP_001899116.1 CDS Rpic_1545 NC_010682.1 1636613 1637794 R KEGG: rme:Rmet_6284 hypothetical protein; hypothetical protein complement(1636613..1637794) Ralstonia pickettii 12J 6286529 YP_001899117.1 CDS Rpic_1546 NC_010682.1 1637845 1639053 R KEGG: rme:Rmet_6283 hypothetical protein; hypothetical protein complement(1637845..1639053) Ralstonia pickettii 12J 6287205 YP_001899118.1 CDS Rpic_1547 NC_010682.1 1639800 1640114 D KEGG: rme:Rmet_6281 hypothetical protein; hypothetical protein 1639800..1640114 Ralstonia pickettii 12J 6287206 YP_001899119.1 CDS Rpic_1548 NC_010682.1 1640212 1640640 D KEGG: rme:Rmet_6280 hypothetical protein; hypothetical protein 1640212..1640640 Ralstonia pickettii 12J 6287207 YP_001899120.1 CDS Rpic_1549 NC_010682.1 1640649 1641416 D KEGG: rme:Rmet_6279 hypothetical protein; hypothetical protein 1640649..1641416 Ralstonia pickettii 12J 6287208 YP_001899121.1 CDS Rpic_1550 NC_010682.1 1641434 1641967 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 1641434..1641967 Ralstonia pickettii 12J 6287045 YP_001899122.1 CDS Rpic_1551 NC_010682.1 1642205 1643281 D PFAM: P4 alpha zinc-binding domain protein; KEGG: rme:Rmet_6277 phage P4 alpha, zinc-binding; P4 alpha zinc-binding domain-containing protein 1642205..1643281 Ralstonia pickettii 12J 6287046 YP_001899123.1 CDS Rpic_1552 NC_010682.1 1643377 1643589 D KEGG: rme:Rmet_6276 hypothetical protein; hypothetical protein 1643377..1643589 Ralstonia pickettii 12J 6287047 YP_001899124.1 CDS Rpic_1553 NC_010682.1 1643671 1643808 R hypothetical protein complement(1643671..1643808) Ralstonia pickettii 12J 6287048 YP_001899125.1 CDS Rpic_1554 NC_010682.1 1643926 1644312 R KEGG: sco:SCO4049 antibiotic binding protein; hypothetical protein complement(1643926..1644312) Ralstonia pickettii 12J 6287563 YP_001899126.1 CDS Rpic_1555 NC_010682.1 1644332 1645330 R KEGG: rme:Rmet_6275 hypothetical protein; hypothetical protein complement(1644332..1645330) Ralstonia pickettii 12J 6287564 YP_001899127.1 CDS Rpic_1556 NC_010682.1 1645836 1645967 D hypothetical protein 1645836..1645967 Ralstonia pickettii 12J 6287565 YP_001899128.1 CDS Rpic_1557 NC_010682.1 1646510 1647697 D PFAM: helix-turn-helix Fis-type; KEGG: rme:Rmet_6273 helix-turn-helix, fis-type; Fis family transcriptional regulator 1646510..1647697 Ralstonia pickettii 12J 6287566 YP_001899129.1 CDS Rpic_1558 NC_010682.1 1647707 1648864 D hypothetical protein 1647707..1648864 Ralstonia pickettii 12J 6287924 YP_001899130.1 CDS Rpic_1559 NC_010682.1 1648944 1649066 R hypothetical protein complement(1648944..1649066) Ralstonia pickettii 12J 6287925 YP_001899131.1 CDS Rpic_1560 NC_010682.1 1649092 1650009 R PFAM: DNA/RNA non-specific endonuclease; KEGG: rme:Rmet_6268 DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease complement(1649092..1650009) Ralstonia pickettii 12J 6287926 YP_001899132.1 CDS Rpic_1561 NC_010682.1 1650251 1650745 R KEGG: rme:Rmet_6267 hypothetical protein; hypothetical protein complement(1650251..1650745) Ralstonia pickettii 12J 6287927 YP_001899133.1 CDS Rpic_1562 NC_010682.1 1650904 1651146 R KEGG: rme:Rmet_6266 hypothetical protein; hypothetical protein complement(1650904..1651146) Ralstonia pickettii 12J 6289143 YP_001899134.1 CDS Rpic_1563 NC_010682.1 1651457 1652320 R KEGG: rso:RSc1656 hypothetical protein; hypothetical protein complement(1651457..1652320) Ralstonia pickettii 12J 6289144 YP_001899135.1 CDS Rpic_1564 NC_010682.1 1652304 1652636 R hypothetical protein complement(1652304..1652636) Ralstonia pickettii 12J 6289145 YP_001899136.1 CDS Rpic_1565 NC_010682.1 1652636 1654543 R hypothetical protein complement(1652636..1654543) Ralstonia pickettii 12J 6289146 YP_001899137.1 CDS Rpic_1566 NC_010682.1 1654645 1655415 R hypothetical protein complement(1654645..1655415) Ralstonia pickettii 12J 6289782 YP_001899138.1 CDS Rpic_1567 NC_010682.1 1655455 1656822 R KEGG: amr:AM1_F0154 hypothetical protein; hypothetical protein complement(1655455..1656822) Ralstonia pickettii 12J 6289783 YP_001899139.1 CDS Rpic_1568 NC_010682.1 1656822 1658042 R KEGG: rme:Rmet_6249 hypothetical protein; hypothetical protein complement(1656822..1658042) Ralstonia pickettii 12J 6289784 YP_001899140.1 CDS Rpic_1569 NC_010682.1 1658054 1659514 R KEGG: rme:Rmet_6248 putative DNA helicase; putative DNA helicase complement(1658054..1659514) Ralstonia pickettii 12J 6289785 YP_001899141.1 CDS Rpic_1570 NC_010682.1 1659516 1659950 R KEGG: rme:Rmet_6247 hypothetical protein; hypothetical protein complement(1659516..1659950) Ralstonia pickettii 12J 6289547 YP_001899142.1 CDS Rpic_1571 NC_010682.1 1660123 1660611 D KEGG: rme:Rmet_6246 hypothetical protein; hypothetical protein 1660123..1660611 Ralstonia pickettii 12J 6289548 YP_001899143.1 CDS Rpic_1572 NC_010682.1 1661109 1662299 D PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bch:Bcen2424_5220 AAA ATPase, central domain protein; ATPase AAA 1661109..1662299 Ralstonia pickettii 12J 6289549 YP_001899144.1 CDS Rpic_1573 NC_010682.1 1662407 1662796 D hypothetical protein 1662407..1662796 Ralstonia pickettii 12J 6289550 YP_001899145.1 CDS Rpic_1574 NC_010682.1 1663029 1664027 D KEGG: plu:plu3523 hypothetical protein; hypothetical protein 1663029..1664027 Ralstonia pickettii 12J 6289081 YP_001899146.1 CDS Rpic_1575 NC_010682.1 1663981 1664208 D KEGG: plu:plu3522 hypothetical protein; hypothetical protein 1663981..1664208 Ralstonia pickettii 12J 6289082 YP_001899147.1 CDS Rpic_1576 NC_010682.1 1664199 1665926 D KEGG: plu:plu3521 hypothetical protein; hypothetical protein 1664199..1665926 Ralstonia pickettii 12J 6289083 YP_001899148.1 CDS Rpic_1577 NC_010682.1 1665986 1667665 D KEGG: pca:Pcar_0116 hypothetical protein; hypothetical protein 1665986..1667665 Ralstonia pickettii 12J 6289084 YP_001899149.1 CDS Rpic_1578 NC_010682.1 1667624 1668694 R KEGG: tcx:Tcr_1645 hypothetical protein; hypothetical protein complement(1667624..1668694) Ralstonia pickettii 12J 6286962 YP_001899150.1 CDS Rpic_1579 NC_010682.1 1668691 1669596 R PFAM: TniB family protein; KEGG: asa:ASA_1044 TniB; TniB family protein complement(1668691..1669596) Ralstonia pickettii 12J 6286963 YP_001899151.1 CDS Rpic_1580 NC_010682.1 1669589 1671511 R KEGG: pca:Pcar_0125 hypothetical protein; hypothetical protein complement(1669589..1671511) Ralstonia pickettii 12J 6286964 YP_001899152.1 CDS Rpic_1581 NC_010682.1 1671515 1672159 R PFAM: TnsA endonuclease; KEGG: rfr:Rfer_3933 hypothetical protein; TnsA endonuclease complement(1671515..1672159) Ralstonia pickettii 12J 6286965 YP_001899153.1 CDS Rpic_1582 NC_010682.1 1672548 1673606 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSp1044 probable cobalt-nickel-resistance system transmembrane protein; hypothetical protein complement(1672548..1673606) Ralstonia pickettii 12J 6287089 YP_001899154.1 CDS Rpic_1584 NC_010682.1 1674052 1674330 D PFAM: protein of unknown function DUF156; KEGG: bte:BTH_II0391 uncharacterized BCR, COG1937 family; hypothetical protein 1674052..1674330 Ralstonia pickettii 12J 6287091 YP_001899155.1 CDS Rpic_1585 NC_010682.1 1674338 1675642 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bvi:Bcep1808_3872 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1674338..1675642 Ralstonia pickettii 12J 6287092 YP_001899156.1 CDS Rpic_1586 NC_010682.1 1675768 1676724 D KEGG: nha:Nham_4399 hypothetical protein; hypothetical protein 1675768..1676724 Ralstonia pickettii 12J 6287828 YP_001899157.1 CDS Rpic_1587 NC_010682.1 1677067 1677990 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: reu:Reut_B5170 cation efflux protein; cation diffusion facilitator family transporter 1677067..1677990 Ralstonia pickettii 12J 6287829 YP_001899158.1 CDS Rpic_1588 NC_010682.1 1678053 1679696 R PFAM: natural resistance-associated macrophage protein; KEGG: rso:RSp0027 putative manganese transport transmembrane protein; natural resistance-associated macrophage protein complement(1678053..1679696) Ralstonia pickettii 12J 6287830 YP_001899159.1 CDS Rpic_1589 NC_010682.1 1679740 1679946 R KEGG: rso:RS02001 hypothetical protein; hypothetical protein complement(1679740..1679946) Ralstonia pickettii 12J 6287831 YP_001899160.1 CDS Rpic_1590 NC_010682.1 1680183 1681613 R PFAM: Carbohydrate-selective porin OprB; KEGG: rme:Rmet_0352 carbohydrate-selective porin OprB; Carbohydrate-selective porin OprB complement(1680183..1681613) Ralstonia pickettii 12J 6287301 YP_001899161.1 CDS Rpic_1591 NC_010682.1 1681993 1682419 R KEGG: rme:Rmet_5647 UspA; hypothetical protein complement(join(1681993..1682184,1682186..1682419)) Ralstonia pickettii 12J 6287302 YP_001899162.1 CDS Rpic_1592 NC_010682.1 1682511 1682672 R hypothetical protein complement(1682511..1682672) Ralstonia pickettii 12J 6287303 YP_001899163.1 CDS Rpic_1593 NC_010682.1 1682926 1684899 D KEGG: bur:Bcep18194_B2571 amino acid transporter-like; amino acid transporter-like protein 1682926..1684899 Ralstonia pickettii 12J 6287304 YP_001899164.1 CDS Rpic_1594 NC_010682.1 1685915 1686289 D hypothetical protein 1685915..1686289 Ralstonia pickettii 12J 6288560 YP_001899165.1 CDS Rpic_1595 NC_010682.1 1686286 1687218 D KEGG: rme:Rmet_6243 hypothetical protein; hypothetical protein 1686286..1687218 Ralstonia pickettii 12J 6288561 YP_001899166.1 CDS Rpic_1596 NC_010682.1 1687485 1689149 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: rme:Rmet_6241 ParB-like partition proteins; parB-like partition protein 1687485..1689149 Ralstonia pickettii 12J 6288562 YP_001899167.1 CDS Rpic_1597 NC_010682.1 1689194 1689679 D KEGG: rme:Rmet_6240 hypothetical protein; hypothetical protein 1689194..1689679 Ralstonia pickettii 12J 6288563 YP_001899168.1 CDS Rpic_1598 NC_010682.1 1689689 1689907 D KEGG: bvi:Bcep1808_7095 hypothetical protein; hypothetical protein 1689689..1689907 Ralstonia pickettii 12J 6288727 YP_001899169.1 CDS Rpic_1599 NC_010682.1 1689900 1690118 D hypothetical protein 1689900..1690118 Ralstonia pickettii 12J 6288728 YP_001899170.1 CDS Rpic_1600 NC_010682.1 1690265 1691143 D KEGG: rme:Rmet_6238 hypothetical protein; hypothetical protein 1690265..1691143 Ralstonia pickettii 12J 6288729 YP_001899171.1 CDS Rpic_1601 NC_010682.1 1691152 1691874 D KEGG: rme:Rmet_6237 hypothetical protein; hypothetical protein 1691152..1691874 Ralstonia pickettii 12J 6288730 YP_001899172.1 CDS Rpic_1602 NC_010682.1 1691876 1692517 D KEGG: rme:Rmet_6236 hypothetical protein; hypothetical protein 1691876..1692517 Ralstonia pickettii 12J 6288128 YP_001899173.1 CDS Rpic_1603 NC_010682.1 1692514 1693314 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: rme:Rmet_6235 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD binding protein 1692514..1693314 Ralstonia pickettii 12J 6288129 YP_001899174.1 CDS Rpic_1604 NC_010682.1 1693429 1694124 D hypothetical protein 1693429..1694124 Ralstonia pickettii 12J 6288130 YP_001899175.1 CDS Rpic_1605 NC_010682.1 1694497 1696572 D PFAM: band 7 protein; KEGG: fps:FP0707 hypothetical protein; hypothetical protein 1694497..1696572 Ralstonia pickettii 12J 6288131 YP_001899176.1 CDS Rpic_1606 NC_010682.1 1696582 1696968 D hypothetical protein 1696582..1696968 Ralstonia pickettii 12J 6289327 YP_001899177.1 CDS Rpic_1607 NC_010682.1 1697107 1697490 D hypothetical protein 1697107..1697490 Ralstonia pickettii 12J 6289328 YP_001899178.1 CDS Rpic_1608 NC_010682.1 1697810 1698235 D hypothetical protein 1697810..1698235 Ralstonia pickettii 12J 6289329 YP_001899179.1 CDS Rpic_1609 NC_010682.1 1698244 1698477 D hypothetical protein 1698244..1698477 Ralstonia pickettii 12J 6289330 YP_001899180.1 CDS Rpic_1610 NC_010682.1 1698488 1698652 D hypothetical protein 1698488..1698652 Ralstonia pickettii 12J 6286585 YP_001899181.1 CDS Rpic_1611 NC_010682.1 1698668 1698964 D hypothetical protein 1698668..1698964 Ralstonia pickettii 12J 6286586 YP_001899182.1 CDS Rpic_1612 NC_010682.1 1699342 1699725 D KEGG: rme:Rmet_6233 putative outer membrane lipoprotein transmembrane; putative outer membrane lipoprotein transmembrane 1699342..1699725 Ralstonia pickettii 12J 6286587 YP_001899183.1 CDS Rpic_1613 NC_010682.1 1699796 1700032 D hypothetical protein 1699796..1700032 Ralstonia pickettii 12J 6286588 YP_001899184.1 CDS Rpic_1614 NC_010682.1 1700043 1700276 D KEGG: bvi:Bcep1808_6920 hypothetical protein; hypothetical protein 1700043..1700276 Ralstonia pickettii 12J 6287229 YP_001899185.1 CDS Rpic_1615 NC_010682.1 1700458 1700838 D KEGG: rme:Rmet_6232 hypothetical protein; hypothetical protein 1700458..1700838 Ralstonia pickettii 12J 6287230 YP_001899186.1 CDS Rpic_1616 NC_010682.1 1700851 1701321 D KEGG: rme:Rmet_6231 hypothetical protein; hypothetical protein 1700851..1701321 Ralstonia pickettii 12J 6287231 YP_001899187.1 CDS Rpic_1617 NC_010682.1 1701324 1701419 D hypothetical protein 1701324..1701419 Ralstonia pickettii 12J 6287232 YP_001899188.1 CDS Rpic_1618 NC_010682.1 1701539 1702048 D KEGG: bch:Bcen2424_6938 hypothetical protein; hypothetical protein 1701539..1702048 Ralstonia pickettii 12J 6288449 YP_001899189.1 CDS Rpic_1619 NC_010682.1 1702171 1702551 D KEGG: rme:Rmet_6230 hypothetical protein; hypothetical protein 1702171..1702551 Ralstonia pickettii 12J 6288450 YP_001899190.1 CDS Rpic_1620 NC_010682.1 1702637 1704175 D KEGG: rme:Rmet_6228 hypothetical protein; hypothetical protein 1702637..1704175 Ralstonia pickettii 12J 6288451 YP_001899191.1 CDS Rpic_1621 NC_010682.1 1704456 1705520 D SMART: AAA ATPase; KEGG: bmu:Bmul_5603 ATPase; ATPase AAA 1704456..1705520 Ralstonia pickettii 12J 6288452 YP_001899192.1 CDS Rpic_1622 NC_010682.1 1705597 1706520 D KEGG: bmu:Bmul_5604 hypothetical protein; hypothetical protein 1705597..1706520 Ralstonia pickettii 12J 6287093 YP_001899193.1 CDS Rpic_1623 NC_010682.1 1706530 1707747 D KEGG: bmu:Bmul_5605 hypothetical protein; hypothetical protein 1706530..1707747 Ralstonia pickettii 12J 6287094 YP_001899194.1 CDS Rpic_1624 NC_010682.1 1707894 1708295 D KEGG: reu:Reut_B3485 hypothetical protein; hypothetical protein 1707894..1708295 Ralstonia pickettii 12J 6287095 YP_001899195.1 CDS Rpic_1625 NC_010682.1 1708308 1708445 D hypothetical protein 1708308..1708445 Ralstonia pickettii 12J 6287096 YP_001899196.1 CDS Rpic_1626 NC_010682.1 1708470 1708757 R hypothetical protein complement(1708470..1708757) Ralstonia pickettii 12J 6289459 YP_001899197.1 CDS Rpic_1627 NC_010682.1 1708878 1709567 R KEGG: rpe:RPE_3244 hypothetical protein; hypothetical protein complement(1708878..1709567) Ralstonia pickettii 12J 6289460 YP_001899198.1 CDS Rpic_1628 NC_010682.1 1709578 1710309 R KEGG: bvi:Bcep1808_6926 hypothetical protein; hypothetical protein complement(1709578..1710309) Ralstonia pickettii 12J 6289461 YP_001899199.1 CDS Rpic_1629 NC_010682.1 1710320 1710448 R hypothetical protein complement(1710320..1710448) Ralstonia pickettii 12J 6289462 YP_001899200.1 CDS Rpic_1630 NC_010682.1 1710469 1710852 R KEGG: rme:Rmet_6225 protein of unknown function DUF583; hypothetical protein complement(1710469..1710852) Ralstonia pickettii 12J 6287097 YP_001899201.1 CDS Rpic_1631 NC_010682.1 1710863 1711543 R KEGG: scl:sce8069 hypothetical protein; hypothetical protein complement(1710863..1711543) Ralstonia pickettii 12J 6287098 YP_001899202.1 CDS Rpic_1632 NC_010682.1 1711737 1712324 R KEGG: rme:Rmet_6223 hypothetical protein; hypothetical protein complement(1711737..1712324) Ralstonia pickettii 12J 6287099 YP_001899203.1 CDS Rpic_1633 NC_010682.1 1712965 1713282 D KEGG: rme:Rmet_6222 hypothetical protein; hypothetical protein 1712965..1713282 Ralstonia pickettii 12J 6287100 YP_001899204.1 CDS Rpic_1634 NC_010682.1 1713234 1714511 D KEGG: rme:Rmet_6221 hypothetical protein; hypothetical protein 1713234..1714511 Ralstonia pickettii 12J 6288947 YP_001899205.1 CDS Rpic_1635 NC_010682.1 1714633 1716045 D KEGG: rme:Rmet_6220 DNA repair exonuclease-like protein; DNA repair exonuclease-like protein 1714633..1716045 Ralstonia pickettii 12J 6288948 YP_001899206.1 CDS Rpic_1636 NC_010682.1 1716190 1716702 D KEGG: rme:Rmet_6219 hypothetical protein; hypothetical protein 1716190..1716702 Ralstonia pickettii 12J 6288949 YP_001899207.1 CDS Rpic_1637 NC_010682.1 1716684 1719008 D KEGG: rme:Rmet_6218 putative ATPase involved in DNA repair; putative DNA repair ATPase 1716684..1719008 Ralstonia pickettii 12J 6288950 YP_001899208.1 CDS Rpic_1638 NC_010682.1 1719101 1719346 D KEGG: rme:Rmet_6217 hypothetical protein; hypothetical protein 1719101..1719346 Ralstonia pickettii 12J 6287820 YP_001899209.1 CDS Rpic_1639 NC_010682.1 1719504 1722437 D PFAM: transposase Tn3 family protein; KEGG: pol:Bpro_2470 transposase Tn3; transposase Tn3 family protein 1719504..1722437 Ralstonia pickettii 12J 6287821 YP_001899210.1 CDS Rpic_1640 NC_010682.1 1722537 1723499 R PFAM: integrase family protein; KEGG: mms:mma_1757 cointegrate resolution protein S; integrase family protein complement(1722537..1723499) Ralstonia pickettii 12J 6287822 YP_001899211.1 CDS Rpic_1641 NC_010682.1 1723524 1725452 R PFAM: cytochrome c class I; iron permease FTR1; KEGG: rme:Rmet_5945 iron permease FTR1; iron permease FTR1 complement(1723524..1725452) Ralstonia pickettii 12J 6287823 YP_001899212.1 CDS Rpic_1642 NC_010682.1 1725597 1726028 R TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rme:Rmet_5946 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(1725597..1726028) Ralstonia pickettii 12J 6288071 YP_001899213.1 CDS Rpic_1643 NC_010682.1 1726116 1728518 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_1242 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 1726116..1728518 Ralstonia pickettii 12J 6288072 YP_001899214.1 CDS Rpic_1644 NC_010682.1 1728515 1729120 D PFAM: phosphoesterase PA-phosphatase related; KEGG: shn:Shewana3_4320 lipoprotein signal peptidase; PA-phosphatase-like phosphoesterase 1728515..1729120 Ralstonia pickettii 12J 6288073 YP_001899215.1 CDS Rpic_1645 NC_010682.1 1729172 1729510 R KEGG: rso:RS05404 hypothetical signal peptide protein; hypothetical protein complement(1729172..1729510) Ralstonia pickettii 12J 6288074 YP_001899216.1 CDS Rpic_1646 NC_010682.1 1729507 1732674 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rso:RS05405 probable cation efflux system transmembrane protein; CzcA family heavy metal efflux pump complement(1729507..1732674) Ralstonia pickettii 12J 6287245 YP_001899217.1 CDS Rpic_1647 NC_010682.1 1732671 1734221 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: reh:H16_A2186 cobalt-zinc-cadmium resistance membrane-fusion protein; RND family efflux transporter MFP subunit complement(1732671..1734221) Ralstonia pickettii 12J 6287246 YP_001899218.1 CDS Rpic_1648 NC_010682.1 1734218 1735522 R KEGG: rme:Rmet_6134 outer membrane efflux protein; outer membrane efflux protein complement(1734218..1735522) Ralstonia pickettii 12J 6287247 YP_001899219.1 CDS Rpic_1649 NC_010682.1 1735594 1736013 R KEGG: rso:RS05408 hypothetical protein; hypothetical protein complement(1735594..1736013) Ralstonia pickettii 12J 6287248 YP_001899220.1 CDS Rpic_1650 NC_010682.1 1736164 1736364 R KEGG: reh:H16_B1270 hypothetical membrane associated protein; hypothetical protein complement(1736164..1736364) Ralstonia pickettii 12J 6288382 YP_001899221.1 CDS Rpic_1651 NC_010682.1 1736484 1736855 R KEGG: bch:Bcen2424_3411 hypothetical protein; hypothetical protein complement(1736484..1736855) Ralstonia pickettii 12J 6288383 YP_001899222.1 CDS Rpic_1652 NC_010682.1 1736971 1737471 R KEGG: bvi:Bcep1808_7265 hypothetical protein; hypothetical protein complement(1736971..1737471) Ralstonia pickettii 12J 6288384 YP_001899223.1 CDS Rpic_1653 NC_010682.1 1737657 1740110 D KEGG: reu:Reut_C6196 ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 1737657..1740110 Ralstonia pickettii 12J 6288385 YP_001899224.1 CDS Rpic_1654 NC_010682.1 1740107 1740325 D hypothetical protein 1740107..1740325 Ralstonia pickettii 12J 6288166 YP_001899225.1 CDS Rpic_1655 NC_010682.1 1740340 1740639 D KEGG: bvi:Bcep1808_7285 YHS domain protein; YHS domain-containing protein 1740340..1740639 Ralstonia pickettii 12J 6288167 YP_001899226.1 CDS Rpic_1656 NC_010682.1 1740684 1740935 D KEGG: reh:H16_A1977 hypothetical protein; hypothetical protein 1740684..1740935 Ralstonia pickettii 12J 6288168 YP_001899227.1 CDS Rpic_1657 NC_010682.1 1740938 1741600 D KEGG: reh:H16_A1978 hypothetical protein; hypothetical protein 1740938..1741600 Ralstonia pickettii 12J 6288169 YP_001899228.1 CDS Rpic_1658 NC_010682.1 1742016 1743899 R KEGG: ajs:Ajs_1470 hypothetical protein; hypothetical protein complement(1742016..1743899) Ralstonia pickettii 12J 6288576 YP_001899229.1 CDS Rpic_1659 NC_010682.1 1744086 1744331 R KEGG: dar:Daro_2269 hypothetical protein; hypothetical protein complement(1744086..1744331) Ralstonia pickettii 12J 6288577 YP_001899230.1 CDS Rpic_1660 NC_010682.1 1744822 1745046 D KEGG: smd:Smed_0214 hypothetical protein; hypothetical protein 1744822..1745046 Ralstonia pickettii 12J 6288578 YP_001899231.1 CDS Rpic_1661 NC_010682.1 1745086 1745859 D KEGG: vpa:VPA0557 hypothetical protein; hypothetical protein 1745086..1745859 Ralstonia pickettii 12J 6288579 YP_001899232.1 CDS Rpic_1662 NC_010682.1 1745856 1746560 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2507 ABC transporter related; ABC transporter-like protein 1745856..1746560 Ralstonia pickettii 12J 6288283 YP_001899233.1 CDS Rpic_1663 NC_010682.1 1746557 1748164 D PFAM: protein of unknown function DUF214; KEGG: pca:Pcar_2373 ABC-type transport system, permease component; hypothetical protein 1746557..1748164 Ralstonia pickettii 12J 6288284 YP_001899234.1 CDS Rpic_1664 NC_010682.1 1748360 1749370 R PFAM: sodium/calcium exchanger membrane region; KEGG: cvi:CV_2442 probable cation antiporter; sodium/calcium exchanger membrane protein complement(1748360..1749370) Ralstonia pickettii 12J 6288285 YP_001899235.1 CDS Rpic_1665 NC_010682.1 1750240 1751688 D PFAM: Carbohydrate-selective porin OprB; KEGG: rme:Rmet_0352 carbohydrate-selective porin OprB; Carbohydrate-selective porin OprB 1750240..1751688 Ralstonia pickettii 12J 6288286 YP_001899236.1 CDS Rpic_1666 NC_010682.1 1751925 1752131 D KEGG: rso:RS02001 hypothetical protein; hypothetical protein 1751925..1752131 Ralstonia pickettii 12J 6287309 YP_001899237.1 CDS Rpic_1667 NC_010682.1 1752175 1753818 D PFAM: natural resistance-associated macrophage protein; KEGG: rso:RSp0027 putative manganese transport transmembrane protein; natural resistance-associated macrophage protein 1752175..1753818 Ralstonia pickettii 12J 6287310 YP_001899238.1 CDS Rpic_1668 NC_010682.1 1753850 1754269 R hypothetical protein complement(1753850..1754269) Ralstonia pickettii 12J 6287311 YP_001899239.1 CDS Rpic_1669 NC_010682.1 1754572 1755360 D KEGG: pnu:Pnuc_1326 hypothetical protein; hypothetical protein 1754572..1755360 Ralstonia pickettii 12J 6287312 YP_001899240.1 CDS Rpic_1670 NC_010682.1 1755400 1756917 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5321 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(1755400..1756917) Ralstonia pickettii 12J 6287488 YP_001899241.1 CDS Rpic_1671 NC_010682.1 1757121 1758275 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_5320 secretion protein HlyD; RND family efflux transporter MFP subunit 1757121..1758275 Ralstonia pickettii 12J 6287489 YP_001899242.1 CDS Rpic_1672 NC_010682.1 1758288 1761452 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_5319 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump 1758288..1761452 Ralstonia pickettii 12J 6287490 YP_001899243.1 CDS Rpic_1673 NC_010682.1 1761482 1762087 R PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: rme:Rmet_5323 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(1761482..1762087) Ralstonia pickettii 12J 6287491 YP_001899244.1 CDS Rpic_1674 NC_010682.1 1762165 1763772 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_5322 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1762165..1763772 Ralstonia pickettii 12J 6286460 YP_001899245.1 CDS Rpic_1675 NC_010682.1 1763769 1764692 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: reu:Reut_B5170 cation efflux protein; cation diffusion facilitator family transporter complement(1763769..1764692) Ralstonia pickettii 12J 6286461 YP_001899246.1 CDS Rpic_1676 NC_010682.1 1765036 1765989 R KEGG: nha:Nham_4399 hypothetical protein; hypothetical protein complement(1765036..1765989) Ralstonia pickettii 12J 6286462 YP_001899247.1 CDS Rpic_1677 NC_010682.1 1766121 1767425 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bte:BTH_II0390 cation efflux system protein; cation diffusion facilitator family transporter complement(1766121..1767425) Ralstonia pickettii 12J 6286463 YP_001899248.1 CDS Rpic_1678 NC_010682.1 1767433 1767711 R PFAM: protein of unknown function DUF156; KEGG: bte:BTH_II0391 uncharacterized BCR, COG1937 family; hypothetical protein complement(1767433..1767711) Ralstonia pickettii 12J 6289671 YP_001899249.1 CDS Rpic_1679 NC_010682.1 1768066 1768713 D PFAM: TnsA endonuclease; KEGG: pca:Pcar_0126 hypothetical protein; TnsA endonuclease 1768066..1768713 Ralstonia pickettii 12J 6289672 YP_001899250.1 CDS Rpic_1680 NC_010682.1 1768716 1770638 D KEGG: asa:ASA_1043 TniA transposase; TniA transposase 1768716..1770638 Ralstonia pickettii 12J 6289673 YP_001899251.1 CDS Rpic_1681 NC_010682.1 1770631 1771536 D PFAM: TniB family protein; KEGG: asa:ASA_1044 TniB; TniB family protein 1770631..1771536 Ralstonia pickettii 12J 6289674 YP_001899252.1 CDS Rpic_1682 NC_010682.1 1771533 1772594 D KEGG: tcx:Tcr_1645 hypothetical protein; hypothetical protein 1771533..1772594 Ralstonia pickettii 12J 6288246 YP_001899253.1 CDS Rpic_1683 NC_010682.1 1772562 1774244 R KEGG: pca:Pcar_0116 hypothetical protein; hypothetical protein complement(1772562..1774244) Ralstonia pickettii 12J 6288247 YP_001899254.1 CDS Rpic_1684 NC_010682.1 1774334 1774687 R KEGG: xac:XAC2421 hypothetical protein; hypothetical protein complement(1774334..1774687) Ralstonia pickettii 12J 6288248 YP_001899255.1 CDS Rpic_1685 NC_010682.1 1775130 1777739 D KEGG: mla:Mlab_1682 hypothetical protein; hypothetical protein 1775130..1777739 Ralstonia pickettii 12J 6288249 YP_001899256.1 CDS Rpic_1686 NC_010682.1 1777732 1778949 D hypothetical protein 1777732..1778949 Ralstonia pickettii 12J 6287590 YP_001899257.1 CDS Rpic_1687 NC_010682.1 1778946 1780157 R KEGG: tth:TTC1428 hypothetical protein; hypothetical protein complement(1778946..1780157) Ralstonia pickettii 12J 6287591 YP_001899258.1 CDS Rpic_1688 NC_010682.1 1780329 1781105 R PFAM: metallophosphoesterase; KEGG: mms:mma_3037 metallophosphoesterase; metallophosphoesterase complement(1780329..1781105) Ralstonia pickettii 12J 6287592 YP_001899259.1 CDS Rpic_1689 NC_010682.1 1781083 1781310 R hypothetical protein complement(1781083..1781310) Ralstonia pickettii 12J 6287593 YP_001899260.1 CDS Rpic_1690 NC_010682.1 1781426 1782646 R PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bch:Bcen2424_5220 AAA ATPase, central domain protein; ATPase AAA complement(1781426..1782646) Ralstonia pickettii 12J 6289636 YP_001899261.1 CDS Rpic_1691 NC_010682.1 1783200 1784087 D PFAM: protein of unknown function DUF214; KEGG: pca:Pcar_2373 ABC-type transport system, permease component; hypothetical protein 1783200..1784087 Ralstonia pickettii 12J 6289637 YP_001899262.1 CDS Rpic_1692 NC_010682.1 1784080 1785225 D KEGG: vpa:VPA0561 hypothetical protein; hypothetical protein 1784080..1785225 Ralstonia pickettii 12J 6289638 YP_001899263.1 CDS Rpic_1693 NC_010682.1 1785322 1787019 D PFAM: ABC-1 domain protein; KEGG: bvi:Bcep1808_7271 ABC-1 domain protein; ABC-1 domain-containing protein 1785322..1787019 Ralstonia pickettii 12J 6289639 YP_001899264.1 CDS Rpic_1694 NC_010682.1 1787070 1788254 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; S-adenosylmethionine synthetase complement(1787070..1788254) Ralstonia pickettii 12J 6288021 YP_001899265.1 CDS Rpic_1695 NC_010682.1 1788509 1789132 D PFAM: LemA family protein; KEGG: reu:Reut_C6198 LemA; LemA family protein 1788509..1789132 Ralstonia pickettii 12J 6288022 YP_001899266.1 CDS Rpic_1696 NC_010682.1 1789129 1789989 D PFAM: protein of unknown function DUF477; KEGG: reh:H16_A2010 beta-propeller domains of methanol dehydrogenase-type (homolog); hypothetical protein 1789129..1789989 Ralstonia pickettii 12J 6288023 YP_001899267.1 CDS Rpic_1697 NC_010682.1 1789989 1790489 D PFAM: protein of unknown function DUF477; KEGG: reu:Reut_C6200 protein of unknown function DUF477; hypothetical protein 1789989..1790489 Ralstonia pickettii 12J 6288024 YP_001899268.1 CDS Rpic_1698 NC_010682.1 1790541 1791017 D KEGG: ajs:Ajs_1493 hypothetical protein; hypothetical protein 1790541..1791017 Ralstonia pickettii 12J 6289196 YP_001899269.1 CDS Rpic_1699 NC_010682.1 1791174 1791422 R KEGG: rme:Rmet_0477 hypothetical protein; hypothetical protein complement(1791174..1791422) Ralstonia pickettii 12J 6289197 YP_001899270.1 CDS Rpic_1700 NC_010682.1 1791771 1792631 D PFAM: protein of unknown function DUF344; KEGG: ajs:Ajs_2697 protein of unknown function DUF344; hypothetical protein 1791771..1792631 Ralstonia pickettii 12J 6289198 YP_001899271.1 CDS Rpic_1701 NC_010682.1 1792708 1793313 D KEGG: ajs:Ajs_2687 hypothetical protein; hypothetical protein 1792708..1793313 Ralstonia pickettii 12J 6289199 YP_001899272.1 CDS Rpic_1702 NC_010682.1 1793426 1795570 R KEGG: reu:Reut_C6194 peptidase M41, FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(1793426..1795570) Ralstonia pickettii 12J 6288683 YP_001899273.1 CDS Rpic_1703 NC_010682.1 1795745 1797340 D in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 1795745..1797340 Ralstonia pickettii 12J 6288684 YP_001899274.1 CDS Rpic_1704 NC_010682.1 1797481 1797858 D KEGG: pna:Pnap_4536 hypothetical protein; hypothetical protein 1797481..1797858 Ralstonia pickettii 12J 6288685 YP_001899275.1 CDS Rpic_1705 NC_010682.1 1798112 1798405 D PFAM: Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_1492 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 1798112..1798405 Ralstonia pickettii 12J 6288686 YP_001899276.1 CDS Rpic_1706 NC_010682.1 1798479 1798793 D KEGG: xau:Xaut_4588 hypothetical protein; hypothetical protein 1798479..1798793 Ralstonia pickettii 12J 6286514 YP_001899277.1 CDS Rpic_1707 NC_010682.1 1798817 1799482 D KEGG: xau:Xaut_4887 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 1798817..1799482 Ralstonia pickettii 12J 6286515 YP_001899278.1 CDS Rpic_1708 NC_010682.1 1799499 1800863 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: ajs:Ajs_2691 beta-lactamase domain protein; beta-lactamase domain-containing protein 1799499..1800863 Ralstonia pickettii 12J 6286516 YP_001899279.1 CDS Rpic_1709 NC_010682.1 1800860 1802374 D catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 1800860..1802374 Ralstonia pickettii 12J 6286517 YP_001899280.1 CDS Rpic_1710 NC_010682.1 1802371 1803276 D Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 1802371..1803276 Ralstonia pickettii 12J 6287359 YP_001899281.1 CDS Rpic_1711 NC_010682.1 1803419 1804762 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_2676 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 1803419..1804762 Ralstonia pickettii 12J 6287360 YP_001899282.1 CDS Rpic_1712 NC_010682.1 1804767 1805417 D KEGG: pna:Pnap_4542 hypothetical protein; hypothetical protein 1804767..1805417 Ralstonia pickettii 12J 6287361 YP_001899283.1 CDS Rpic_1713 NC_010682.1 1805414 1807858 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: xau:Xaut_4847 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase 1805414..1807858 Ralstonia pickettii 12J 6287362 YP_001899284.1 CDS Rpic_1714 NC_010682.1 1807866 1809173 D PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_4848 major facilitator superfamily MFS_1; major facilitator superfamily protein 1807866..1809173 Ralstonia pickettii 12J 6287744 YP_001899285.1 CDS Rpic_1715 NC_010682.1 1809339 1809665 R PFAM: protein of unknown function DUF326; KEGG: azo:azo1773 hypothetical protein; hypothetical protein complement(1809339..1809665) Ralstonia pickettii 12J 6287745 YP_001899286.1 CDS Rpic_1716 NC_010682.1 1810243 1810629 D PFAM: copper resistance protein CopC; KEGG: reh:H16_B2183 copper resistance protein C; copper resistance protein CopC 1810243..1810629 Ralstonia pickettii 12J 6287746 YP_001899287.1 CDS Rpic_1717 NC_010682.1 1810752 1812149 R TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RSp0654 probable two component sensor histidine kinase transcription regulator protein; heavy metal sensor signal transduction histidine kinase complement(1810752..1812149) Ralstonia pickettii 12J 6287747 YP_001899288.1 CDS Rpic_1718 NC_010682.1 1812149 1812835 R TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSp0655 probable two component response regulator transcription regulator protein; winged helix family two component heavy metal response transcriptional regulator complement(1812149..1812835) Ralstonia pickettii 12J 6289132 YP_001899289.1 CDS Rpic_1719 NC_010682.1 1813007 1814902 D TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: rso:RSp0656 probable copper resistance transmembrane protein; copper-resistance protein 1813007..1814902 Ralstonia pickettii 12J 6289133 YP_001899290.1 CDS Rpic_1720 NC_010682.1 1814902 1815876 D PFAM: copper resistance B precursor; KEGG: rso:RSp0657 probable copper resistance protein B; copper resistance B 1814902..1815876 Ralstonia pickettii 12J 6289134 YP_001899291.1 CDS Rpic_1721 NC_010682.1 1815909 1816295 D PFAM: copper resistance protein CopC; KEGG: rme:Rmet_6114 copper resistance protein CopC; copper resistance protein CopC 1815909..1816295 Ralstonia pickettii 12J 6289135 YP_001899292.1 CDS Rpic_1722 NC_010682.1 1816300 1817229 D PFAM: copper resistance D domain protein; KEGG: rso:RSp0659 probable copper resistance D transmembrane protein; copper resistance D domain-containing protein 1816300..1817229 Ralstonia pickettii 12J 6286199 YP_001899293.1 CDS Rpic_1723 NC_010682.1 1817258 1817749 D PFAM: protein of unknown function DUF411; KEGG: bps:BPSS2003 conserved periplasmic protein; hypothetical protein 1817258..1817749 Ralstonia pickettii 12J 6286200 YP_001899294.1 CDS Rpic_1724 NC_010682.1 1817793 1819058 R KEGG: rme:Rmet_6120 hypothetical protein; hypothetical protein complement(1817793..1819058) Ralstonia pickettii 12J 6286201 YP_001899295.1 CDS Rpic_1725 NC_010682.1 1819389 1820864 D KEGG: rme:Rmet_6216 hypothetical protein; hypothetical protein 1819389..1820864 Ralstonia pickettii 12J 6286202 YP_001899296.1 CDS Rpic_1726 NC_010682.1 1821025 1821690 R hypothetical protein complement(1821025..1821690) Ralstonia pickettii 12J 6287253 YP_001899297.1 CDS Rpic_1727 NC_010682.1 1821959 1822432 R KEGG: rme:Rmet_5183 hypothetical protein; hypothetical protein complement(1821959..1822432) Ralstonia pickettii 12J 6287254 YP_001899298.1 CDS Rpic_1728 NC_010682.1 1822578 1823156 D TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: rso:RSc2364 hypothetical protein; 2'-5' RNA ligase 1822578..1823156 Ralstonia pickettii 12J 6287255 YP_001899299.1 CDS Rpic_1729 NC_010682.1 1823256 1824149 R PFAM: integrase family protein; KEGG: reu:Reut_C5993 phage integrase; integrase family protein complement(1823256..1824149) Ralstonia pickettii 12J 6287256 YP_001899300.1 CDS Rpic_1730 NC_010682.1 1824325 1824543 R SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: reu:Reut_B5596 histone-like nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS complement(1824325..1824543) Ralstonia pickettii 12J 6288794 YP_001899301.1 CDS Rpic_1731 NC_010682.1 1824700 1827699 D PFAM: transposase Tn3 family protein; KEGG: bvi:Bcep1808_7171 transposase Tn3 family protein; transposase Tn3 family protein 1824700..1827699 Ralstonia pickettii 12J 6288795 YP_001899302.1 CDS Rpic_1732 NC_010682.1 1827692 1828027 D KEGG: bvi:Bcep1808_7205 TnpC; TnpC protein 1827692..1828027 Ralstonia pickettii 12J 6288796 YP_001899303.1 CDS Rpic_1733 NC_010682.1 1828193 1829386 R PFAM: integrase family protein; KEGG: bmu:Bmul_5789 integrase family protein; integrase family protein complement(1828193..1829386) Ralstonia pickettii 12J 6288797 YP_001899304.1 CDS Rpic_1734 NC_010682.1 1829421 1830062 R KEGG: kpn:KPN_01713 hypothetical protein; hypothetical protein complement(1829421..1830062) Ralstonia pickettii 12J 6286577 YP_001899305.1 CDS Rpic_1735 NC_010682.1 1830077 1830352 R PFAM: plasmid stabilization system; KEGG: sfl:CP0218 hypothetical protein; plasmid stabilization system protein complement(1830077..1830352) Ralstonia pickettii 12J 6286578 YP_001899306.1 CDS Rpic_1736 NC_010682.1 1830352 1830615 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: smd:Smed_6450 transcriptional regulator, CopG family; CopG family transcriptional regulator complement(1830352..1830615) Ralstonia pickettii 12J 6286579 YP_001899307.1 CDS Rpic_1737 NC_010682.1 1830667 1831398 R KEGG: gvi:gll4023 unknown protein; hypothetical protein complement(1830667..1831398) Ralstonia pickettii 12J 6286580 YP_001899308.1 CDS Rpic_1738 NC_010682.1 1831612 1832649 D KEGG: reu:Reut_A1626 hypothetical protein; hypothetical protein 1831612..1832649 Ralstonia pickettii 12J 6287676 YP_001899309.1 CDS Rpic_1739 NC_010682.1 1833358 1833846 D hypothetical protein 1833358..1833846 Ralstonia pickettii 12J 6287677 YP_001899310.1 CDS Rpic_1740 NC_010682.1 1833933 1835612 R PFAM: integrase family protein; KEGG: reh:H16_A1678 phage integrase family protein; integrase family protein complement(1833933..1835612) Ralstonia pickettii 12J 6287678 YP_001899311.1 CDS Rpic_1741 NC_010682.1 1835821 1837206 R TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_6110 heavy metal sensor signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase complement(1835821..1837206) Ralstonia pickettii 12J 6287679 YP_001899312.1 CDS Rpic_1742 NC_010682.1 1837203 1837889 R TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: reh:H16_B2186 response regulator of copper response,OmpR-family; winged helix family two component heavy metal response transcriptional regulator complement(1837203..1837889) Ralstonia pickettii 12J 6287472 YP_001899313.1 CDS Rpic_1743 NC_010682.1 1838079 1838243 D KEGG: rme:Rmet_6112 copper-resistance protein CopA; copper-resistance protein CopA 1838079..1838243 Ralstonia pickettii 12J 6287473 YP_001899314.1 CDS Rpic_1744 NC_010682.1 1838848 1839174 R PFAM: protein of unknown function DUF326; KEGG: azo:azo1773 hypothetical protein; hypothetical protein complement(1838848..1839174) Ralstonia pickettii 12J 6287474 YP_001899315.1 CDS Rpic_1745 NC_010682.1 1839803 1840969 D PFAM: FAD dependent oxidoreductase; KEGG: nmu:Nmul_A1499 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1839803..1840969 Ralstonia pickettii 12J 6287475 YP_001899316.1 CDS Rpic_1746 NC_010682.1 1840991 1842319 R PFAM: integrase family protein; KEGG: reh:H16_A1678 phage integrase family protein; integrase family protein complement(1840991..1842319) Ralstonia pickettii 12J 6288178 YP_001899317.1 CDS Rpic_1747 NC_010682.1 1842924 1843487 R KEGG: dac:Daci_5251 small-conductance mechanosensitive channel-like protein; small-conductance mechanosensitive channel-like protein complement(1842924..1843487) Ralstonia pickettii 12J 6288179 YP_001899318.1 CDS Rpic_1748 NC_010682.1 1843586 1844026 R KEGG: cps:CPS_3443 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(1843586..1844026) Ralstonia pickettii 12J 6288180 YP_001899319.1 CDS Rpic_1749 NC_010682.1 1844762 1846369 D PFAM: glycosyl transferase family 39; KEGG: rme:Rmet_5966 glycosyl transferase, family 39; glycosyl transferase family protein 1844762..1846369 Ralstonia pickettii 12J 6288181 YP_001899320.1 CDS Rpic_1750 NC_010682.1 1846366 1846749 D PFAM: GtrA family protein; KEGG: rme:Rmet_5967 GtrA-like protein; GtrA family protein 1846366..1846749 Ralstonia pickettii 12J 6287141 YP_001899321.1 CDS Rpic_1751 NC_010682.1 1846746 1847867 D PFAM: glycosyl transferase family 2; KEGG: rme:Rmet_5968 glycosyl transferase, family 2; family 2 glycosyl transferase 1846746..1847867 Ralstonia pickettii 12J 6287142 YP_001899322.1 CDS Rpic_1752 NC_010682.1 1848100 1848402 D KEGG: rme:Rmet_5969 hypothetical protein; hypothetical protein 1848100..1848402 Ralstonia pickettii 12J 6287143 YP_001899323.1 CDS Rpic_1753 NC_010682.1 1848460 1850949 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rme:Rmet_5970 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(1848460..1850949) Ralstonia pickettii 12J 6287144 YP_001899324.1 CDS Rpic_1754 NC_010682.1 1851043 1852101 D KEGG: pna:Pnap_1393 ISXo7 transposase; ISXo7 transposase 1851043..1852101 Ralstonia pickettii 12J 6286297 YP_001899325.1 CDS Rpic_1755 NC_010682.1 1852569 1852991 R TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: rme:Rmet_5971 flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB complement(1852569..1852991) Ralstonia pickettii 12J 6286298 YP_001899326.1 CDS Rpic_1756 NC_010682.1 1853288 1854355 D PFAM: porin Gram-negative type; KEGG: rme:Rmet_5974 porin, gram-negative type; porin 1853288..1854355 Ralstonia pickettii 12J 6286299 YP_001899327.1 CDS Rpic_1757 NC_010682.1 1854538 1854816 D KEGG: rme:Rmet_5975 hypothetical protein; hypothetical protein 1854538..1854816 Ralstonia pickettii 12J 6286300 YP_001899328.1 CDS Rpic_1758 NC_010682.1 1855115 1855510 R KEGG: rme:Rmet_5976 hypothetical protein; hypothetical protein complement(1855115..1855510) Ralstonia pickettii 12J 6286370 YP_001899329.1 CDS Rpic_1759 NC_010682.1 1855625 1857055 R TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_5977 heavy metal sensor signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase complement(1855625..1857055) Ralstonia pickettii 12J 6286371 YP_001899330.1 CDS Rpic_1760 NC_010682.1 1857060 1857737 R TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rme:Rmet_5978 two component heavy metal response transcriptional regulator, winged helix family; winged helix family two component heavy metal response transcriptional regulator complement(1857060..1857737) Ralstonia pickettii 12J 6286372 YP_001899331.1 CDS Rpic_1761 NC_010682.1 1857739 1858689 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rme:Rmet_5979 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(1857739..1858689) Ralstonia pickettii 12J 6286373 YP_001899332.1 CDS Rpic_1762 NC_010682.1 1858740 1861931 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_5980 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(1858740..1861931) Ralstonia pickettii 12J 6287824 YP_001899333.1 CDS Rpic_1763 NC_010682.1 1861948 1863510 R TIGRFAM: Membrane Fusion Protein cluster 2 protein; efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_5981 membrane fusion protein cluster 2; hypothetical protein complement(1861948..1863510) Ralstonia pickettii 12J 6287825 YP_001899334.1 CDS Rpic_1764 NC_010682.1 1863528 1864784 R PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5982 outer membrane efflux protein; outer membrane efflux protein complement(1863528..1864784) Ralstonia pickettii 12J 6287826 YP_001899335.1 CDS Rpic_1765 NC_010682.1 1864926 1865249 D KEGG: rme:Rmet_5983 hypothetical protein; hypothetical protein 1864926..1865249 Ralstonia pickettii 12J 6287827 YP_001899336.1 CDS Rpic_1766 NC_010682.1 1865313 1865492 R hypothetical protein complement(1865313..1865492) Ralstonia pickettii 12J 6287317 YP_001899337.1 CDS Rpic_1767 NC_010682.1 1865522 1866376 R PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rme:Rmet_5984 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase complement(1865522..1866376) Ralstonia pickettii 12J 6287318 YP_001899338.1 CDS Rpic_1768 NC_010682.1 1866422 1866880 D PFAM: MgtC/SapB transporter; KEGG: rme:Rmet_5985 MgtC/SapB transporter; MgtC/SapB transporter 1866422..1866880 Ralstonia pickettii 12J 6287319 YP_001899339.1 CDS Rpic_1769 NC_010682.1 1866988 1867395 D hypothetical protein 1866988..1867395 Ralstonia pickettii 12J 6287320 YP_001899340.1 CDS Rpic_1770 NC_010682.1 1867483 1867659 R KEGG: rme:Rmet_5986 hypothetical protein; hypothetical protein complement(1867483..1867659) Ralstonia pickettii 12J 6288230 YP_001899341.1 CDS Rpic_1771 NC_010682.1 1868258 1869196 D KEGG: rme:Rmet_5987 hypothetical protein; hypothetical protein 1868258..1869196 Ralstonia pickettii 12J 6288231 YP_001899342.1 CDS Rpic_1772 NC_010682.1 1869193 1869474 D KEGG: rme:Rmet_5988 phage integrase-like SAM-like; phage integrase-like protein SAM-like protein 1869193..1869474 Ralstonia pickettii 12J 6288232 YP_001899343.1 CDS Rpic_1773 NC_010682.1 1869590 1870582 R KEGG: har:HEAR1605 putative cointegrate resolution protein T; putative cointegrate resolution protein T complement(1869590..1870582) Ralstonia pickettii 12J 6288233 YP_001899344.1 CDS Rpic_1774 NC_010682.1 1870953 1872407 D KEGG: mms:mma_0497 hypothetical protein; hypothetical protein 1870953..1872407 Ralstonia pickettii 12J 6288588 YP_001899345.1 CDS Rpic_1775 NC_010682.1 1872997 1873485 R PFAM: protein of unknown function DUF411; KEGG: bpl:BURPS1106A_A2729 hypothetical protein; hypothetical protein complement(1872997..1873485) Ralstonia pickettii 12J 6288589 YP_001899346.1 CDS Rpic_1776 NC_010682.1 1873517 1874446 R PFAM: copper resistance D domain protein; KEGG: rso:RSp0659 probable copper resistance D transmembrane protein; copper resistance D domain-containing protein complement(1873517..1874446) Ralstonia pickettii 12J 6288590 YP_001899347.1 CDS Rpic_1777 NC_010682.1 1874451 1874837 R PFAM: copper resistance protein CopC; KEGG: rme:Rmet_6114 copper resistance protein CopC; copper resistance protein CopC complement(1874451..1874837) Ralstonia pickettii 12J 6288591 YP_001899348.1 CDS Rpic_1778 NC_010682.1 1874870 1875868 R PFAM: copper resistance B precursor; KEGG: rso:RSp0657 probable copper resistance protein B; copper resistance B complement(1874870..1875868) Ralstonia pickettii 12J 6288904 YP_001899349.1 CDS Rpic_1779 NC_010682.1 1875868 1877706 R TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: rso:RSp0656 probable copper resistance transmembrane protein; copper-resistance protein complement(1875868..1877706) Ralstonia pickettii 12J 6288905 YP_001899350.1 CDS Rpic_1780 NC_010682.1 1877879 1878565 D TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSp0655 probable two component response regulator transcription regulator protein; winged helix family two component heavy metal response transcriptional regulator 1877879..1878565 Ralstonia pickettii 12J 6288906 YP_001899351.1 CDS Rpic_1781 NC_010682.1 1878565 1879962 D TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RSp0654 probable two component sensor histidine kinase transcription regulator protein; heavy metal sensor signal transduction histidine kinase 1878565..1879962 Ralstonia pickettii 12J 6288907 YP_001899352.1 CDS Rpic_1782 NC_010682.1 1880205 1880438 D KEGG: rme:Rmet_6121 hypothetical protein; hypothetical protein 1880205..1880438 Ralstonia pickettii 12J 6288920 YP_001899353.1 CDS Rpic_1783 NC_010682.1 1880751 1881185 R TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bxe:Bxe_C1217 transcriptional regulator, MerR family; putative transcriptional regulator MerR complement(1880751..1881185) Ralstonia pickettii 12J 6288921 YP_001899354.1 CDS Rpic_1784 NC_010682.1 1881257 1881607 D PFAM: Mercuric transport protein MerT; KEGG: net:Neut_2570 mercuric transport protein MerT; putative mercuric transport protein 1881257..1881607 Ralstonia pickettii 12J 6288922 YP_001899355.1 CDS Rpic_1785 NC_010682.1 1881621 1881893 D TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein; KEGG: sty:HCM1.153 putative mercuric transport protein periplasmic binding protein; mercuric transport periplasmic protein 1881621..1881893 Ralstonia pickettii 12J 6288923 YP_001899356.1 CDS Rpic_1786 NC_010682.1 1881922 1882341 D PFAM: MerC mercury resistance protein; KEGG: pol:Bpro_2229 MerC mercury resistance protein; putative mercury transport protein MerC 1881922..1882341 Ralstonia pickettii 12J 6286990 YP_001899357.1 CDS Rpic_1787 NC_010682.1 1882384 1884069 D TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; Heavy metal transport/detoxification protein; KEGG: pol:Bpro_2228 mercuric reductase MerA; putative mercuric reductase 1882384..1884069 Ralstonia pickettii 12J 6286991 YP_001899358.1 CDS Rpic_1788 NC_010682.1 1884087 1884449 D TIGRFAM: mercuric resistence transcriptional repressor protein MerD; PFAM: regulatory protein MerR; KEGG: sty:HCM1.159 putative mercuric resistance operon coregulator; mercuric resistence transcriptional repressor, MerD, MerR family 1884087..1884449 Ralstonia pickettii 12J 6286992 YP_001899359.1 CDS Rpic_1789 NC_010682.1 1884502 1885158 D PFAM: alkylmercury lyase; KEGG: mms:mma_1753 organomercurial lyase; alkylmercury lyase 1884502..1885158 Ralstonia pickettii 12J 6286993 YP_001899360.1 CDS Rpic_1791 NC_010682.1 1885419 1886093 D PFAM: cytochrome c class I; KEGG: pol:Bpro_3501 cytochrome c, class I; cytochrome c class I 1885419..1886093 Ralstonia pickettii 12J 6289317 YP_001899361.1 CDS Rpic_1792 NC_010682.1 1886172 1888109 R PFAM: Thioredoxin domain; KEGG: reh:H16_A3455 thiol:disulfide interchange protein; Protein-disulfide reductase complement(1886172..1888109) Ralstonia pickettii 12J 6289318 YP_001899362.1 CDS Rpic_1793 NC_010682.1 1888250 1888579 R PFAM: nitrogen regulatory protein P-II; KEGG: pol:Bpro_3498 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II complement(1888250..1888579) Ralstonia pickettii 12J 6289319 YP_001899363.1 CDS Rpic_1794 NC_010682.1 1888639 1889244 R KEGG: tbd:Tbd_1833 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(1888639..1889244) Ralstonia pickettii 12J 6287145 YP_001899364.1 CDS Rpic_1795 NC_010682.1 1889303 1889962 R PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: nha:Nham_4413 hypothetical protein; isoprenylcysteine carboxyl methyltransferase complement(1889303..1889962) Ralstonia pickettii 12J 6287146 YP_001899365.1 CDS Rpic_1796 NC_010682.1 1890034 1890306 R PFAM: glutaredoxin 2; KEGG: nca:Noca_3783 glutaredoxin 2; glutaredoxin complement(1890034..1890306) Ralstonia pickettii 12J 6287147 YP_001899366.1 CDS Rpic_1797 NC_010682.1 1890316 1891008 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: nca:Noca_3785 redoxin domain protein; alkyl hydroperoxide reductase complement(1890316..1891008) Ralstonia pickettii 12J 6287148 YP_001899367.1 CDS Rpic_1798 NC_010682.1 1891005 1891928 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: nca:Noca_3784 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane protein complement(1891005..1891928) Ralstonia pickettii 12J 6288751 YP_001899368.1 CDS Rpic_1799 NC_010682.1 1891988 1892287 R hypothetical protein complement(1891988..1892287) Ralstonia pickettii 12J 6288752 YP_001899369.1 CDS Rpic_1800 NC_010682.1 1892288 1892533 R KEGG: bpt:Bpet4578 hypothetical protein; hypothetical protein complement(1892288..1892533) Ralstonia pickettii 12J 6288753 YP_001899370.1 CDS Rpic_1801 NC_010682.1 1892585 1892890 R KEGG: bpt:Bpet4577 hypothetical protein; hypothetical protein complement(1892585..1892890) Ralstonia pickettii 12J 6288754 YP_001899371.1 CDS Rpic_1802 NC_010682.1 1893069 1893329 R KEGG: azo:azo3114 hypothetical secreted protein; hypothetical protein complement(1893069..1893329) Ralstonia pickettii 12J 6286378 YP_001899372.1 CDS Rpic_1803 NC_010682.1 1893391 1893777 R KEGG: mms:mma_0928 hypothetical protein; hypothetical protein complement(1893391..1893777) Ralstonia pickettii 12J 6286379 YP_001899373.1 CDS Rpic_1804 NC_010682.1 1893894 1896314 R KEGG: bvi:Bcep1808_3972 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase complement(1893894..1896314) Ralstonia pickettii 12J 6286380 YP_001899374.1 CDS Rpic_1805 NC_010682.1 1896327 1896755 R TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bpd:BURPS668_A0596 Cu(I)-responsive transcriptional regulator; MerR family transcriptional regulator complement(1896327..1896755) Ralstonia pickettii 12J 6286381 YP_001899375.1 CDS Rpic_1806 NC_010682.1 1897004 1897414 D KEGG: reh:H16_A2184 hypothetical membrane protein; hypothetical protein 1897004..1897414 Ralstonia pickettii 12J 6287305 YP_001899376.1 CDS Rpic_1807 NC_010682.1 1897485 1898786 D KEGG: reh:H16_A2185 cobalt-zinc-cadmium resistance outer membrane porin; cobalt-zinc-cadmium resistance outer membrane porin 1897485..1898786 Ralstonia pickettii 12J 6287306 YP_001899377.1 CDS Rpic_1808 NC_010682.1 1898783 1900315 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: reh:H16_A2186 cobalt-zinc-cadmium resistance membrane-fusion protein; RND family efflux transporter MFP subunit 1898783..1900315 Ralstonia pickettii 12J 6287307 YP_001899378.1 CDS Rpic_1809 NC_010682.1 1900312 1903482 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rso:RS05405 probable cation efflux system transmembrane protein; CzcA family heavy metal efflux pump 1900312..1903482 Ralstonia pickettii 12J 6287308 YP_001899379.1 CDS Rpic_1810 NC_010682.1 1903479 1903817 D KEGG: reh:H16_A2188 hypothetical periplasmic protein; hypothetical protein 1903479..1903817 Ralstonia pickettii 12J 6289551 YP_001899380.1 CDS Rpic_1811 NC_010682.1 1904173 1904553 D hypothetical protein 1904173..1904553 Ralstonia pickettii 12J 6289552 YP_001899381.1 CDS Rpic_1812 NC_010682.1 1904670 1905179 D KEGG: rme:Rmet_6122 hypothetical protein; hypothetical protein 1904670..1905179 Ralstonia pickettii 12J 6289553 YP_001899382.1 CDS Rpic_1813 NC_010682.1 1905311 1905580 D KEGG: rme:Rmet_4461 hypothetical protein; hypothetical protein 1905311..1905580 Ralstonia pickettii 12J 6289554 YP_001899383.1 CDS Rpic_1814 NC_010682.1 1906166 1907242 R TIGRFAM: lipoprotein signal peptidase; PFAM: phosphoesterase PA-phosphatase related; peptidase A8 signal peptidase II; KEGG: sfr:Sfri_3463 lipoprotein signal peptidase; lipoprotein signal peptidase complement(1906166..1907242) Ralstonia pickettii 12J 6289179 YP_001899384.1 CDS Rpic_1815 NC_010682.1 1907239 1909641 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rme:Rmet_5947 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(1907239..1909641) Ralstonia pickettii 12J 6289180 YP_001899385.1 CDS Rpic_1816 NC_010682.1 1909727 1910161 D TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rme:Rmet_5946 transcriptional regulator, MerR family; MerR family transcriptional regulator 1909727..1910161 Ralstonia pickettii 12J 6289181 YP_001899386.1 CDS Rpic_1817 NC_010682.1 1910322 1912244 D PFAM: cytochrome c class I; iron permease FTR1; KEGG: rme:Rmet_5945 iron permease FTR1; iron permease FTR1 1910322..1912244 Ralstonia pickettii 12J 6289182 YP_001899387.1 CDS Rpic_1818 NC_010682.1 1912269 1912715 R PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_1022 tyrosine phosphatase; N-acetyltransferase GCN5 complement(1912269..1912715) Ralstonia pickettii 12J 6289227 YP_001899388.1 CDS Rpic_1819 NC_010682.1 1912724 1913428 R PFAM: major intrinsic protein; KEGG: rso:RS05492 probable transmembrane ABC transporter protein; major intrinsic protein complement(1912724..1913428) Ralstonia pickettii 12J 6289228 YP_001899389.1 CDS Rpic_1820 NC_010682.1 1913434 1913928 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rso:RSp1128 putative arsenate reductase (arsenical PUMP modifier) protein; protein tyrosine phosphatase complement(1913434..1913928) Ralstonia pickettii 12J 6289229 YP_001899390.1 CDS Rpic_1821 NC_010682.1 1913941 1914435 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bmu:Bmul_5674 protein tyrosine phosphatase; protein tyrosine phosphatase complement(1913941..1914435) Ralstonia pickettii 12J 6289230 YP_001899391.1 CDS Rpic_1822 NC_010682.1 1914446 1914928 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_A2179 lactoylglutathione lyase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1914446..1914928) Ralstonia pickettii 12J 6289416 YP_001899392.1 CDS Rpic_1824 NC_010682.1 1915175 1915363 R hypothetical protein complement(1915175..1915363) Ralstonia pickettii 12J 6289418 YP_001899393.1 CDS Rpic_1825 NC_010682.1 1915633 1917333 R PFAM: integrase family protein; KEGG: rso:RS01673 putative integrase/recombinase protein; integrase family protein complement(1915633..1917333) Ralstonia pickettii 12J 6289419 YP_001899394.1 CDS Rpic_1826 NC_010682.1 1917862 1918719 R PFAM: Integrase catalytic region; KEGG: rme:Rmet_6067 integrase, catalytic region; Integrase catalytic subunit complement(1917862..1918719) Ralstonia pickettii 12J 6286125 YP_001899395.1 CDS Rpic_1827 NC_010682.1 1918773 1919102 R PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_6068 transposase IS3/IS911; transposase IS3/IS911 family protein complement(1918773..1919102) Ralstonia pickettii 12J 6286126 YP_001899396.1 CDS Rpic_1828 NC_010682.1 1919452 1920369 R KEGG: pnu:Pnuc_1126 hypothetical protein; hypothetical protein complement(1919452..1920369) Ralstonia pickettii 12J 6286127 YP_001899397.1 CDS Rpic_1829 NC_010682.1 1920559 1920801 D hypothetical protein 1920559..1920801 Ralstonia pickettii 12J 6286128 YP_001899398.1 CDS Rpic_1830 NC_010682.1 1920788 1921027 D hypothetical protein 1920788..1921027 Ralstonia pickettii 12J 6288158 YP_001899399.1 CDS Rpic_1831 NC_010682.1 1921558 1921899 D KEGG: mms:mma_1758 cointegrate resolution protein T; cointegrate resolution protein T 1921558..1921899 Ralstonia pickettii 12J 6288159 YP_001899400.1 CDS Rpic_1832 NC_010682.1 1922501 1922908 R hypothetical protein complement(1922501..1922908) Ralstonia pickettii 12J 6288160 YP_001899401.1 CDS Rpic_1833 NC_010682.1 1923302 1923781 D PFAM: blue (type 1) copper domain protein; KEGG: rme:Rmet_6116 blue (type 1) copper domain; blue (type 1) copper domain-containing protein 1923302..1923781 Ralstonia pickettii 12J 6288161 YP_001899402.1 CDS Rpic_1834 NC_010682.1 1923930 1924319 R KEGG: rme:Rmet_5976 hypothetical protein; hypothetical protein complement(1923930..1924319) Ralstonia pickettii 12J 6289359 YP_001899403.1 CDS Rpic_1835 NC_010682.1 1924488 1925810 D KEGG: rme:Rmet_6120 hypothetical protein; hypothetical protein 1924488..1925810 Ralstonia pickettii 12J 6289360 YP_001899404.1 CDS Rpic_1836 NC_010682.1 1926205 1926693 R PFAM: protein of unknown function DUF411; KEGG: bps:BPSS2003 conserved periplasmic protein; hypothetical protein complement(1926205..1926693) Ralstonia pickettii 12J 6289361 YP_001899405.1 CDS Rpic_1837 NC_010682.1 1926726 1927655 R PFAM: copper resistance D domain protein; KEGG: rso:RSp0659 probable copper resistance D transmembrane protein; copper resistance D domain-containing protein complement(1926726..1927655) Ralstonia pickettii 12J 6289362 YP_001899406.1 CDS Rpic_1838 NC_010682.1 1927660 1928046 R PFAM: copper resistance protein CopC; KEGG: rme:Rmet_6114 copper resistance protein CopC; copper resistance protein CopC complement(1927660..1928046) Ralstonia pickettii 12J 6286332 YP_001899407.1 CDS Rpic_1839 NC_010682.1 1928081 1929370 R PFAM: copper resistance B precursor; KEGG: rme:Rmet_6113 copper resistance B precursor; copper resistance B complement(1928081..1929370) Ralstonia pickettii 12J 6286333 YP_001899408.1 CDS Rpic_1840 NC_010682.1 1929390 1931204 R TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: rso:RSp0656 probable copper resistance transmembrane protein; copper-resistance protein complement(1929390..1931204) Ralstonia pickettii 12J 6286334 YP_001899409.1 CDS Rpic_1841 NC_010682.1 1931392 1932078 D TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSp0655 probable two component response regulator transcription regulator protein; winged helix family two component heavy metal response transcriptional regulator 1931392..1932078 Ralstonia pickettii 12J 6286335 YP_001899410.1 CDS Rpic_1842 NC_010682.1 1932078 1933448 D TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RSp0654 probable two component sensor histidine kinase transcription regulator protein; heavy metal sensor signal transduction histidine kinase 1932078..1933448 Ralstonia pickettii 12J 6287579 YP_001899411.1 CDS Rpic_1843 NC_010682.1 1933677 1934003 D PFAM: protein of unknown function DUF326; KEGG: azo:azo1773 hypothetical protein; hypothetical protein 1933677..1934003 Ralstonia pickettii 12J 6287580 YP_001899412.1 CDS Rpic_1844 NC_010682.1 1934135 1934368 D KEGG: rme:Rmet_6121 hypothetical protein; hypothetical protein 1934135..1934368 Ralstonia pickettii 12J 6287581 YP_001899413.1 CDS Rpic_1845 NC_010682.1 1934499 1934990 R KEGG: rso:RSc0612 probable transmembrane protein; hypothetical protein complement(1934499..1934990) Ralstonia pickettii 12J 6287582 YP_001899414.1 CDS Rpic_1846 NC_010682.1 1934987 1935835 R PFAM: ApbE family lipoprotein; KEGG: reu:Reut_A1180 ApbE-like lipoprotein; ApbE family lipoprotein complement(1934987..1935835) Ralstonia pickettii 12J 6289069 YP_001899415.1 CDS Rpic_1847 NC_010682.1 1935832 1936353 R PFAM: FMN-binding domain protein; KEGG: reu:Reut_A1179 FMN-binding; FMN-binding domain-containing protein complement(1935832..1936353) Ralstonia pickettii 12J 6289070 YP_001899416.1 CDS Rpic_1848 NC_010682.1 1936381 1937289 R KEGG: pnu:Pnuc_0361 conserved hypothetical secreted protein; hypothetical protein complement(1936381..1937289) Ralstonia pickettii 12J 6289071 YP_001899417.1 CDS Rpic_1849 NC_010682.1 1937373 1939661 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bvi:Bcep1808_3972 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(1937373..1939661) Ralstonia pickettii 12J 6289072 YP_001899418.1 CDS Rpic_1850 NC_010682.1 1939838 1941817 D TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bpt:Bpet4591 copper resistance protein A precursor; copper-resistance protein 1939838..1941817 Ralstonia pickettii 12J 6286974 YP_001899419.1 CDS Rpic_1851 NC_010682.1 1941922 1944951 R PFAM: transposase Tn3 family protein; KEGG: pap:PSPA7_5340 transposase; transposase Tn3 family protein complement(1941922..1944951) Ralstonia pickettii 12J 6286975 YP_001899420.1 CDS Rpic_1852 NC_010682.1 1944948 1945541 R PFAM: Resolvase domain; KEGG: pap:PSPA7_5339 DNA-invertase; resolvase domain-containing protein complement(1944948..1945541) Ralstonia pickettii 12J 6286976 YP_001899421.1 CDS Rpic_1853 NC_010682.1 1945780 1946058 D KEGG: rme:Rmet_6342 hypothetical protein; hypothetical protein 1945780..1946058 Ralstonia pickettii 12J 6286977 YP_001899422.1 CDS Rpic_1854 NC_010682.1 1946055 1946339 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: rme:Rmet_6341 addiction module toxin, RelE/StbE; RelE/StbE family addiction module toxin 1946055..1946339 Ralstonia pickettii 12J 6286289 YP_001899423.1 CDS Rpic_1855 NC_010682.1 1946746 1947306 D KEGG: rme:Rmet_6340 hypothetical protein; hypothetical protein 1946746..1947306 Ralstonia pickettii 12J 6286290 YP_001899424.1 CDS Rpic_1856 NC_010682.1 1947440 1947796 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: rme:Rmet_6339 cupin 2, conserved barrel; cupin 1947440..1947796 Ralstonia pickettii 12J 6286291 YP_001899425.1 CDS Rpic_1857 NC_010682.1 1948063 1952031 R TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; KEGG: bam:Bamb_6464 outer membrane autotransporter barrel domain; outer membrane autotransporter barrel domain-containing protein complement(1948063..1952031) Ralstonia pickettii 12J 6286292 YP_001899426.1 CDS Rpic_1858 NC_010682.1 1952326 1956432 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(1952326..1956432) Ralstonia pickettii 12J 6289855 YP_001899427.1 CDS Rpic_1859 NC_010682.1 1956580 1957149 R KEGG: rso:RSc1721 hypothetical protein; putative transcriptional regulator complement(1956580..1957149) Ralstonia pickettii 12J 6289856 YP_001899428.1 CDS Rpic_1860 NC_010682.1 1957235 1958830 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: rso:RSc1720 hypothetical protein; carbohydrate kinase 1957235..1958830 Ralstonia pickettii 12J 6289857 YP_001899429.1 CDS pgi NC_010682.1 1958902 1960521 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1958902..1960521 Ralstonia pickettii 12J 6289858 YP_001899430.1 CDS Rpic_1862 NC_010682.1 1960531 1961241 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1718 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(1960531..1961241) Ralstonia pickettii 12J 6287181 YP_001899431.1 CDS Rpic_1863 NC_010682.1 1961306 1961923 D PFAM: lipolytic protein G-D-S-L family; KEGG: rso:RSc1717 probable esterase signal peptide protein; lysophospholipase 1961306..1961923 Ralstonia pickettii 12J 6287182 YP_001899432.1 CDS Rpic_1864 NC_010682.1 1962008 1962700 D KEGG: rso:RSc1716 putative signal peptidase I (SPase I) protein; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 1962008..1962700 Ralstonia pickettii 12J 6287183 YP_001899433.1 CDS Rpic_1865 NC_010682.1 1962785 1964725 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rso:RSc1715 probable peptidyl-prolyl cis-trans isomerase transmembrane protein; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1962785..1964725) Ralstonia pickettii 12J 6287184 YP_001899434.1 CDS Rpic_1866 NC_010682.1 1965148 1965420 R PFAM: histone family protein DNA-binding protein; KEGG: rso:RSc1714 probable DNA-binding protein HU-beta; histone family protein DNA-binding protein complement(1965148..1965420) Ralstonia pickettii 12J 6289326 YP_001899435.1 CDS Rpic_1867 NC_010682.1 1965578 1967992 R KEGG: rso:RSc1713 probable ATP-dependent protease La protein; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(1965578..1967992) Ralstonia pickettii 12J 6288861 YP_001899436.1 CDS clpX NC_010682.1 1968162 1969436 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(1968162..1969436) Ralstonia pickettii 12J 6288862 YP_001899437.1 CDS clpP NC_010682.1 1969634 1970281 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(1969634..1970281) Ralstonia pickettii 12J 6288863 YP_001899438.1 CDS tig NC_010682.1 1970323 1971666 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(1970323..1971666) Ralstonia pickettii 12J 6288465 YP_001899439.1 CDS mnmC NC_010682.1 1971912 1973930 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(1971912..1973930) Ralstonia pickettii 12J 6288466 YP_001899440.1 CDS Rpic_1872 NC_010682.1 1974225 1974419 R KEGG: rso:RSc1708 hypothetical protein; hypothetical protein complement(1974225..1974419) Ralstonia pickettii 12J 6288467 YP_001899441.1 CDS Rpic_1873 NC_010682.1 1974637 1975062 R PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_2792 probable acetyltransferase; N-acetyltransferase GCN5 complement(1974637..1975062) Ralstonia pickettii 12J 6288468 YP_001899442.1 CDS Rpic_1874 NC_010682.1 1975070 1975498 R TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: rme:Rmet_5611 cytochrome c oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV complement(1975070..1975498) Ralstonia pickettii 12J 6288032 YP_001899443.1 CDS Rpic_1875 NC_010682.1 1975495 1976160 R TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: rme:Rmet_5610 cytochrome c oxidase, subunit III; cytochrome o ubiquinol oxidase subunit III complement(1975495..1976160) Ralstonia pickettii 12J 6288033 YP_001899444.1 CDS Rpic_1876 NC_010682.1 1976153 1978156 R KEGG: rme:Rmet_5609 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I complement(1976153..1978156) Ralstonia pickettii 12J 6288034 YP_001899445.1 CDS Rpic_1877 NC_010682.1 1978260 1979312 R TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: rme:Rmet_5608 ubiquinol oxidase, subunit II; ubiquinol oxidase subunit II complement(1978260..1979312) Ralstonia pickettii 12J 6288035 YP_001899446.1 CDS Rpic_1878 NC_010682.1 1979469 1980788 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_5607 major facilitator superfamily MFS_1; major facilitator superfamily protein 1979469..1980788 Ralstonia pickettii 12J 6287213 YP_001899447.1 CDS Rpic_1879 NC_010682.1 1980872 1981060 D PFAM: CsbD family protein; KEGG: bxe:Bxe_A3352 hypothetical protein; CsbD family protein 1980872..1981060 Ralstonia pickettii 12J 6287214 YP_001899448.1 CDS Rpic_1880 NC_010682.1 1981199 1981414 R KEGG: reh:H16_B1457 hypothetical protein; hypothetical protein complement(1981199..1981414) Ralstonia pickettii 12J 6287215 YP_001899449.1 CDS Rpic_1881 NC_010682.1 1981901 1982653 R PFAM: Asp/Glu/hydantoin racemase; KEGG: har:HEAR1463 maleate cis-trans isomerase protein; Asp/Glu/hydantoin racemase complement(1981901..1982653) Ralstonia pickettii 12J 6287216 YP_001899450.1 CDS Rpic_1882 NC_010682.1 1982680 1983999 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_5283 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1982680..1983999) Ralstonia pickettii 12J 6288087 YP_001899451.1 CDS Rpic_1883 NC_010682.1 1984213 1985142 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A1233 transcriptional regulator, LysR-family; LysR family transcriptional regulator 1984213..1985142 Ralstonia pickettii 12J 6288088 YP_001899452.1 CDS Rpic_1884 NC_010682.1 1985172 1985513 D hypothetical protein 1985172..1985513 Ralstonia pickettii 12J 6288089 YP_001899453.1 CDS Rpic_1885 NC_010682.1 1985621 1986088 R KEGG: rso:RS01728 probable transmembrane protein; hypothetical protein complement(1985621..1986088) Ralstonia pickettii 12J 6288090 YP_001899454.1 CDS Rpic_1886 NC_010682.1 1986106 1986885 R PFAM: ApbE family lipoprotein; KEGG: bbt:BBta_2627 putative thiamine biosynthesis lipoprotein ApbE transmembrane; ApbE family lipoprotein complement(1986106..1986885) Ralstonia pickettii 12J 6288378 YP_001899455.1 CDS Rpic_1887 NC_010682.1 1986885 1987445 R PFAM: FMN-binding domain protein; KEGG: rso:RS01729 probable signal peptide protein; FMN-binding domain-containing protein complement(1986885..1987445) Ralstonia pickettii 12J 6288379 YP_001899456.1 CDS Rpic_1888 NC_010682.1 1987481 1988857 R PFAM: phosphate-selective porin O and P; KEGG: rso:RS01730 hypothetical signal peptide protein; phosphate-selective porin O and P complement(1987481..1988857) Ralstonia pickettii 12J 6288380 YP_001899457.1 CDS Rpic_1889 NC_010682.1 1988895 1990301 R PFAM: Di-haem cytochrome c peroxidase; KEGG: rso:RS01731 probable lipoprotein; Di-heme cytochrome c peroxidase complement(1988895..1990301) Ralstonia pickettii 12J 6288381 YP_001899458.1 CDS Rpic_1890 NC_010682.1 1990555 1990713 R hypothetical protein complement(1990555..1990713) Ralstonia pickettii 12J 6288612 YP_001899459.1 CDS Rpic_1892 NC_010682.1 1991460 1994579 R PFAM: acriflavin resistance protein; KEGG: rso:RSc1654 probable transmembrane drug efflux protein; acriflavin resistance protein complement(1991460..1994579) Ralstonia pickettii 12J 6288615 YP_001899460.1 CDS Rpic_1893 NC_010682.1 1994622 1995830 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSc1653 putative transport/efflux transmembrane protein; RND family efflux transporter MFP subunit complement(1994622..1995830) Ralstonia pickettii 12J 6289660 YP_001899461.1 CDS Rpic_1894 NC_010682.1 1996016 1996849 D TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: rso:RSc1652 putative phytoene synthase protein; squalene synthase 1996016..1996849 Ralstonia pickettii 12J 6289661 YP_001899462.1 CDS Rpic_1895 NC_010682.1 1996850 1998034 R PFAM: protein of unknown function DUF1501; KEGG: rso:RSc1651 hypothetical protein; hypothetical protein complement(1996850..1998034) Ralstonia pickettii 12J 6289662 YP_001899463.1 CDS Rpic_1896 NC_010682.1 1998060 1999685 R PFAM: Protein of unknown function DUF1800; KEGG: rso:RSc1650 probable signal peptide protein; hypothetical protein complement(1998060..1999685) Ralstonia pickettii 12J 6288675 YP_001899464.1 CDS Rpic_1897 NC_010682.1 1999756 2000202 R KEGG: rso:RSc1649 putative transmembrane protein; hypothetical protein complement(1999756..2000202) Ralstonia pickettii 12J 6288676 YP_001899465.1 CDS ompR NC_010682.1 2000393 2001115 D part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 2000393..2001115 Ralstonia pickettii 12J 6288677 YP_001899466.1 CDS Rpic_1899 NC_010682.1 2001149 2002510 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RSc1647 probable oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase 2001149..2002510 Ralstonia pickettii 12J 6288678 YP_001899467.1 CDS Rpic_1900 NC_010682.1 2002794 2003342 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc1646 putative alkyl hydroperoxide reductase (subunit C) oxidoreductase protein; alkyl hydroperoxide reductase 2002794..2003342 Ralstonia pickettii 12J 6287752 YP_001899468.1 CDS Rpic_1901 NC_010682.1 2003423 2003944 D PFAM: Carboxymuconolactone decarboxylase; KEGG: rme:Rmet_1951 alkylhydroperoxidase AhpD core; Carboxymuconolactone decarboxylase 2003423..2003944 Ralstonia pickettii 12J 6287753 YP_001899469.1 CDS ispF NC_010682.1 2004026 2004532 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2004026..2004532) Ralstonia pickettii 12J 6287754 YP_001899470.1 CDS ispD NC_010682.1 2004529 2005287 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(2004529..2005287) Ralstonia pickettii 12J 6287755 YP_001899471.1 CDS Rpic_1904 NC_010682.1 2005460 2008891 D KEGG: rso:RSc1642 probable transcription-repair coupling factor protein; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 2005460..2008891 Ralstonia pickettii 12J 6287268 YP_001899472.1 CDS Rpic_1905 NC_010682.1 2008929 2010122 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 2008929..2010122 Ralstonia pickettii 12J 6287269 YP_001899473.1 CDS Rpic_1906 NC_010682.1 2010160 2011092 D KEGG: rso:RSc1640 putative phosphoserine phosphatase protein; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase type 3; phosphoserine phosphatase SerB 2010160..2011092 Ralstonia pickettii 12J 6287270 YP_001899474.1 CDS Rpic_1907 NC_010682.1 2011099 2012160 D PFAM: protein of unknown function DUF1016; KEGG: vei:Veis_1183 protein of unknown function DUF1016; hypothetical protein 2011099..2012160 Ralstonia pickettii 12J 6287271 YP_001899475.1 CDS Rpic_1908 NC_010682.1 2012235 2013446 R catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase complement(2012235..2013446) Ralstonia pickettii 12J 6289695 YP_001899476.1 CDS Rpic_1909 NC_010682.1 2013488 2014231 R KEGG: rso:RSc1638 putative signal peptide protein; putative signal peptide protein complement(2013488..2014231) Ralstonia pickettii 12J 6289696 YP_001899477.1 CDS Rpic_1910 NC_010682.1 2014206 2015390 R catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase complement(2014206..2015390) Ralstonia pickettii 12J 6289697 YP_001899478.1 CDS rimO NC_010682.1 2015478 2016839 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase complement(2015478..2016839) Ralstonia pickettii 12J 6289698 YP_001899479.1 CDS Rpic_1912 NC_010682.1 2016906 2017862 R PFAM: dihydrouridine synthase DuS; KEGG: rso:RSc1635 hypothetical protein; dihydrouridine synthase complement(2016906..2017862) Ralstonia pickettii 12J 6288517 YP_001899480.1 CDS Rpic_1913 NC_010682.1 2018085 2018639 R TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: rso:RSc1634 hypothetical protein; polyhydroxyalkonate synthesis repressor PhaR complement(2018085..2018639) Ralstonia pickettii 12J 6288518 YP_001899481.1 CDS Rpic_1914 NC_010682.1 2019045 2019785 R catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; acetyacetyl-CoA reductase complement(2019045..2019785) Ralstonia pickettii 12J 6288519 YP_001899482.1 CDS Rpic_1915 NC_010682.1 2019908 2021089 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(2019908..2021089) Ralstonia pickettii 12J 6288520 YP_001899483.1 CDS Rpic_1916 NC_010682.1 2021179 2022972 R TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rso:RSc1631 probable poly-beta-hydroxybutyrate polymerase transmembrane protein; poly(R)-hydroxyalkanoic acid synthase complement(2021179..2022972) Ralstonia pickettii 12J 6289863 YP_001899484.1 CDS Rpic_1917 NC_010682.1 2023243 2023479 D KEGG: rso:RSc1630 probable transmembrane protein; hypothetical protein 2023243..2023479 Ralstonia pickettii 12J 6289864 YP_001899485.1 CDS Rpic_1918 NC_010682.1 2023484 2024293 R PFAM: protein of unknown function DUF152; KEGG: rso:RSc1629 hypothetical protein; hypothetical protein complement(2023484..2024293) Ralstonia pickettii 12J 6289865 YP_001899486.1 CDS Rpic_1919 NC_010682.1 2024277 2025389 R KEGG: rso:RSc1628 probable ribosomal large subunit pseudouridine synthase D protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase complement(2024277..2025389) Ralstonia pickettii 12J 6289866 YP_001899487.1 CDS Rpic_1920 NC_010682.1 2025486 2026262 D TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: rso:RSc1627 probable transmembrane protein; outer membrane assembly lipoprotein YfiO 2025486..2026262 Ralstonia pickettii 12J 6286673 YP_001899488.1 CDS Rpic_1921 NC_010682.1 2026329 2028506 R SMART: helicase c2; KEGG: rso:RSc1626 probable ATP-dependent DNA helicase-related protein; helicase c2 complement(2026329..2028506) Ralstonia pickettii 12J 6286674 YP_001899489.1 CDS Rpic_1922 NC_010682.1 2028555 2028758 R KEGG: rso:RSc1625 hypothetical protein; hypothetical protein complement(2028555..2028758) Ralstonia pickettii 12J 6286675 YP_001899490.1 CDS Rpic_1923 NC_010682.1 2028793 2029557 R KEGG: rso:RSc1624 hypothetical protein; hypothetical protein complement(2028793..2029557) Ralstonia pickettii 12J 6286676 YP_001899491.1 CDS Rpic_1924 NC_010682.1 2029668 2032001 D PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: rso:RSc1623 putative transcription accessory protein; RNA binding S1 domain-containing protein 2029668..2032001 Ralstonia pickettii 12J 6289393 YP_001899492.1 CDS Rpic_1925 NC_010682.1 2032188 2032628 D KEGG: rso:RSc1622 hypothetical protein; hypothetical protein 2032188..2032628 Ralstonia pickettii 12J 6289394 YP_001899493.1 CDS Rpic_1926 NC_010682.1 2032708 2034609 R PFAM: K potassium transporter; KEGG: rso:RSc1621 probable potassium uptake transmembrane protein; K potassium transporter complement(2032708..2034609) Ralstonia pickettii 12J 6289395 YP_001899494.1 CDS Rpic_1927 NC_010682.1 2035000 2035239 D KEGG: rso:RSc1620 probable transmembrane protein; hypothetical protein 2035000..2035239 Ralstonia pickettii 12J 6289396 YP_001899495.1 CDS Rpic_1928 NC_010682.1 2035256 2036353 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(2035256..2036353) Ralstonia pickettii 12J 6288139 YP_001899496.1 CDS Rpic_1929 NC_010682.1 2036896 2037483 D PFAM: NUDIX hydrolase; KEGG: rso:RSc1618 hypothetical protein; NUDIX hydrolase 2036896..2037483 Ralstonia pickettii 12J 6286558 YP_001899497.1 CDS aat NC_010682.1 2037508 2038254 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2037508..2038254 Ralstonia pickettii 12J 6286559 YP_001899498.1 CDS Rpic_1931 NC_010682.1 2038241 2039008 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2038241..2039008 Ralstonia pickettii 12J 6286560 YP_001899499.1 CDS Rpic_1932 NC_010682.1 2039191 2039505 R PFAM: TM2 domain containing protein?; KEGG: rso:RSc1614 probable transmembrane protein; TM2 domain-containing protein complement(2039191..2039505) Ralstonia pickettii 12J 6286542 YP_001899500.1 CDS Rpic_1933 NC_010682.1 2039575 2039856 R KEGG: rso:RSc1613 hypothetical protein; hypothetical protein complement(2039575..2039856) Ralstonia pickettii 12J 6286543 YP_001899501.1 CDS Rpic_1934 NC_010682.1 2039853 2041262 R TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: rso:RSc1612 putative iron-sulfur binding protein; iron-sulfur cluster binding protein complement(2039853..2041262) Ralstonia pickettii 12J 6286544 YP_001899502.1 CDS Rpic_1935 NC_010682.1 2041298 2042023 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rso:RSc1611 hypothetical protein; hypothetical protein complement(2041298..2042023) Ralstonia pickettii 12J 6286545 YP_001899503.1 CDS Rpic_1936 NC_010682.1 2042264 2043061 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rso:RSc1610 probable transcription regulator protein; IclR family transcriptional regulator 2042264..2043061 Ralstonia pickettii 12J 6286184 YP_001899504.1 CDS Rpic_1937 NC_010682.1 2043129 2044319 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rso:RSc1609 putative D-alanyl-D-alanine-endopeptidase (penicillin-binding protein); peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 complement(2043129..2044319) Ralstonia pickettii 12J 6286185 YP_001899505.1 CDS Rpic_1938 NC_010682.1 2044756 2045463 R PFAM: nitroreductase; KEGG: rso:RSc1608 probable oxidoreductase protein; nitroreductase complement(2044756..2045463) Ralstonia pickettii 12J 6286186 YP_001899506.1 CDS Rpic_1939 NC_010682.1 2045479 2045922 R PFAM: thioesterase superfamily protein; KEGG: bvi:Bcep1808_1377 thioesterase superfamily protein; thioesterase superfamily protein complement(2045479..2045922) Ralstonia pickettii 12J 6286187 YP_001899507.1 CDS Rpic_1940 NC_010682.1 2045981 2046898 R PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: rso:RSc1607 probable transmembrane protein; hypothetical protein complement(2045981..2046898) Ralstonia pickettii 12J 6288405 YP_001899508.1 CDS Rpic_1941 NC_010682.1 2046895 2047899 R PFAM: histone deacetylase superfamily; KEGG: rso:RSc1606 hypothetical protein; histone deacetylase superfamily protein complement(2046895..2047899) Ralstonia pickettii 12J 6288406 YP_001899509.1 CDS Rpic_1942 NC_010682.1 2048255 2048836 D TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: rso:RSc1605 hypothetical protein; phasin family protein 2048255..2048836 Ralstonia pickettii 12J 6288407 YP_001899510.1 CDS Rpic_1943 NC_010682.1 2049192 2049737 D KEGG: rso:RSc1604 probable transmembrane protein; hypothetical protein 2049192..2049737 Ralstonia pickettii 12J 6288408 YP_001899511.1 CDS Rpic_1944 NC_010682.1 2049842 2051623 R TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rso:RSc1603 probable dihydrolipoamide dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein; dihydrolipoamide dehydrogenase complement(2049842..2051623) Ralstonia pickettii 12J 6288429 YP_001899512.1 CDS Rpic_1945 NC_010682.1 2051682 2052254 R PFAM: 20S proteasome A and B subunits; KEGG: rso:RSc1602 hypothetical protein; 20S proteasome subunits A and B complement(2051682..2052254) Ralstonia pickettii 12J 6288430 YP_001899513.1 CDS Rpic_1946 NC_010682.1 2052360 2054033 R TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rso:RSc1601 dihydrolipoamide acetyltransferase; dihydrolipoamide acetyltransferase complement(2052360..2054033) Ralstonia pickettii 12J 6288431 YP_001899514.1 CDS aceE NC_010682.1 2054186 2056876 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(2054186..2056876) Ralstonia pickettii 12J 6288432 YP_001899515.1 CDS Rpic_1948 NC_010682.1 2057190 2059766 D KEGG: rso:RSc1598 probable two-component transmembrane sensor histidine kinase transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2057190..2059766 Ralstonia pickettii 12J 6289620 YP_001899516.1 CDS Rpic_1949 NC_010682.1 2059807 2060442 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rso:RSc1597 probable response regulator transcription regulator protein; two component LuxR family transcriptional regulator 2059807..2060442 Ralstonia pickettii 12J 6289621 YP_001899517.1 CDS Rpic_1950 NC_010682.1 2060538 2061407 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2060538..2061407 Ralstonia pickettii 12J 6289622 YP_001899518.1 CDS Rpic_1951 NC_010682.1 2061502 2063616 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: rso:RSc1595 probable oligopeptidase A (OPDA protein); oligopeptidase A 2061502..2063616 Ralstonia pickettii 12J 6289623 YP_001899519.1 CDS Rpic_1952 NC_010682.1 2063767 2064576 D TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rso:RSc1593 probable exodeoxyribonuclease III protein; exodeoxyribonuclease III Xth 2063767..2064576 Ralstonia pickettii 12J 6286304 YP_001899520.1 CDS Rpic_1953 NC_010682.1 2064589 2065053 D TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: rso:RSc1592 probable transcription regulator protein; MarR family transcriptional regulator 2064589..2065053 Ralstonia pickettii 12J 6286305 YP_001899521.1 CDS Rpic_1954 NC_010682.1 2065060 2065866 R KEGG: rso:RSc1591 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase oxidoreductase protein; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase complement(2065060..2065866) Ralstonia pickettii 12J 6286306 YP_001899522.1 CDS Rpic_1955 NC_010682.1 2065896 2066699 R KEGG: bur:Bcep18194_B1778 4-oxalocrotonate decarboxylase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase complement(2065896..2066699) Ralstonia pickettii 12J 6286307 YP_001899523.1 CDS Rpic_1956 NC_010682.1 2066703 2067092 R PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bur:Bcep18194_B1779 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase complement(2066703..2067092) Ralstonia pickettii 12J 6289139 YP_001899524.1 CDS Rpic_1957 NC_010682.1 2067103 2067972 R KEGG: bch:Bcen2424_4234 3,4-dihydroxyphenylacetate 2,3-dioxygenase; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; 3,4-dihydroxyphenylacetate 2,3-dioxygenase complement(2067103..2067972) Ralstonia pickettii 12J 6289140 YP_001899525.1 CDS Rpic_1958 NC_010682.1 2068014 2069495 R TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bur:Bcep18194_B1781 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase complement(2068014..2069495) Ralstonia pickettii 12J 6289141 YP_001899526.1 CDS Rpic_1959 NC_010682.1 2069492 2070262 R KEGG: bcy:Bcer98_0972 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG2 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 complement(2069492..2070262) Ralstonia pickettii 12J 6289142 YP_001899527.1 CDS Rpic_1960 NC_010682.1 2070259 2071011 R KEGG: bpd:BURPS668_A1023 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1 complement(2070259..2071011) Ralstonia pickettii 12J 6287999 YP_001899528.1 CDS Rpic_1961 NC_010682.1 2071199 2071489 R KEGG: rso:RSc1590 hypothetical protein; hypothetical protein complement(2071199..2071489) Ralstonia pickettii 12J 6288000 YP_001899529.1 CDS Rpic_1962 NC_010682.1 2072020 2073450 R PFAM: amino acid permease-associated region; KEGG: rso:RSc1588 probable amino-acid transporter transmembrane protein; amino acid permease-associated protein complement(2072020..2073450) Ralstonia pickettii 12J 6288001 YP_001899530.1 CDS Rpic_1963 NC_010682.1 2073640 2074713 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2073640..2074713) Ralstonia pickettii 12J 6288002 YP_001899531.1 CDS Rpic_1964 NC_010682.1 2074884 2075261 R KEGG: rso:RSc1586 probable lipoprotein; putative lipoprotein complement(2074884..2075261) Ralstonia pickettii 12J 6287105 YP_001899532.1 CDS Rpic_1965 NC_010682.1 2075576 2076514 D PFAM: Aldose 1-epimerase; KEGG: rso:RSc1585 hypothetical protein; aldose 1-epimerase 2075576..2076514 Ralstonia pickettii 12J 6287106 YP_001899533.1 CDS Rpic_1966 NC_010682.1 2076524 2076859 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_A3878 alkylhydroperoxidase AhpD core; alkylhydroperoxidase complement(2076524..2076859) Ralstonia pickettii 12J 6287107 YP_001899534.1 CDS Rpic_1967 NC_010682.1 2076975 2077889 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1156 transcriptional regulator, AraC family; AraC family transcriptional regulator 2076975..2077889 Ralstonia pickettii 12J 6287108 YP_001899535.1 CDS Rpic_1968 NC_010682.1 2077915 2078370 R PFAM: regulatory protein MerR; KEGG: bvi:Bcep1808_1771 putative transcriptional regulator, MerR family; MerR family transcriptional regulator complement(2077915..2078370) Ralstonia pickettii 12J 6288778 YP_001899536.1 CDS Rpic_1969 NC_010682.1 2078363 2078788 R KEGG: sal:Sala_1640 hypothetical protein; hypothetical protein complement(2078363..2078788) Ralstonia pickettii 12J 6288779 YP_001899537.1 CDS Rpic_1970 NC_010682.1 2079109 2079540 R PFAM: regulatory protein MerR; KEGG: rso:RSc1584 putative transcription regulator protein; MerR family transcriptional regulator complement(2079109..2079540) Ralstonia pickettii 12J 6288781 YP_001899538.1 CDS ihfA NC_010682.1 2079615 2080031 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(2079615..2080031) Ralstonia pickettii 12J 6286270 YP_001899539.1 CDS pheT NC_010682.1 2080110 2082539 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(2080110..2082539) Ralstonia pickettii 12J 6286271 YP_001899540.1 CDS pheS NC_010682.1 2082603 2083637 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(2082603..2083637) Ralstonia pickettii 12J 6286272 YP_001899541.1 CDS rplT NC_010682.1 2083779 2084135 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(2083779..2084135) Ralstonia pickettii 12J 6288687 YP_001899542.1 CDS rpmI NC_010682.1 2084164 2084361 R PFAM: ribosomal protein L35; KEGG: rso:RSc1579 50S ribosomal protein L35; 50S ribosomal protein L35 complement(2084164..2084361) Ralstonia pickettii 12J 6288688 YP_001899543.1 CDS infC NC_010682.1 2084529 2085050 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(2084529..2085050) Ralstonia pickettii 12J 6288689 YP_001899544.1 CDS thrS NC_010682.1 2085093 2087000 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(2085093..2087000) Ralstonia pickettii 12J 6288690 YP_001899545.1 CDS Rpic_1978 NC_010682.1 2087482 2089707 R KEGG: rso:RSc1576 probable GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I SpoT/RelA complement(2087482..2089707) Ralstonia pickettii 12J 6288558 YP_001899546.1 CDS Rpic_1979 NC_010682.1 2089746 2090114 R PFAM: Endoribonuclease L-PSP; KEGG: rso:RSc1575 hypothetical protein; endoribonuclease L-PSP complement(2089746..2090114) Ralstonia pickettii 12J 6288559 YP_001899547.1 CDS Rpic_1980 NC_010682.1 2090145 2091014 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc1574 putative hydrolase protein; alpha/beta hydrolase fold protein complement(2090145..2091014) Ralstonia pickettii 12J 6286946 YP_001899548.1 CDS Rpic_1981 NC_010682.1 2091159 2091938 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(2091159..2091938) Ralstonia pickettii 12J 6286947 YP_001899549.1 CDS Rpic_1982 NC_010682.1 2091961 2092596 R KEGG: dac:Daci_4265 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(2091961..2092596) Ralstonia pickettii 12J 6286948 YP_001899550.1 CDS Rpic_1983 NC_010682.1 2092607 2093308 R KEGG: pol:Bpro_1905 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(2092607..2093308) Ralstonia pickettii 12J 6286949 YP_001899551.1 CDS Rpic_1984 NC_010682.1 2093462 2094007 D KEGG: rso:RSc1569 putative transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold domain protein; SMART: PAS domain containing protein; LuxR family transcriptional regulator 2093462..2094007 Ralstonia pickettii 12J 6289806 YP_001899552.1 CDS Rpic_1985 NC_010682.1 2094021 2094806 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc1568 short chain dehydrogenase; short chain dehydrogenase complement(2094021..2094806) Ralstonia pickettii 12J 6289807 YP_001899553.1 CDS Rpic_1986 NC_010682.1 2095017 2096702 D PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: rso:RSc1567 probable electron transfer flavoprotein-ubiquinone oxidoreductase; electron-transferring-flavoprotein dehydrogenase 2095017..2096702 Ralstonia pickettii 12J 6289808 YP_001899554.1 CDS Rpic_1987 NC_010682.1 2096771 2097871 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(2096771..2097871) Ralstonia pickettii 12J 6289809 YP_001899555.1 CDS Rpic_1988 NC_010682.1 2097957 2098370 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rso:RSc1565 putative FKBP-type peptidyl-prolyl cis-trans isomerase signal peptide protein; peptidyl-prolyl isomerase complement(2097957..2098370) Ralstonia pickettii 12J 6287452 YP_001899556.1 CDS Rpic_1989 NC_010682.1 2098466 2100373 R PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: rso:RSc1564 probable transmembrane protein; phospholipid/glycerol acyltransferase complement(2098466..2100373) Ralstonia pickettii 12J 6287453 YP_001899557.1 CDS Rpic_1990 NC_010682.1 2100456 2100911 R PFAM: CBS domain containing protein; KEGG: rso:RSc1563 hypothetical protein; hypothetical protein complement(2100456..2100911) Ralstonia pickettii 12J 6287454 YP_001899558.1 CDS Rpic_1991 NC_010682.1 2101103 2102485 D catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 2101103..2102485 Ralstonia pickettii 12J 6287455 YP_001899559.1 CDS Rpic_1992 NC_010682.1 2102485 2103309 D PFAM: alpha/beta hydrolase fold; Thioesterase; KEGG: rso:RSc1561 probable hydrolase protein; alpha/beta hydrolase fold protein 2102485..2103309 Ralstonia pickettii 12J 6289850 YP_001899560.1 CDS Rpic_1993 NC_010682.1 2103331 2103648 D KEGG: rso:RSc1560 putative transmembrane protein; hypothetical protein 2103331..2103648 Ralstonia pickettii 12J 6289851 YP_001899561.1 CDS Rpic_1994 NC_010682.1 2103653 2104984 R PFAM: ribonuclease BN; KEGG: rso:RSc1559 putative ribonuclease BN transmembrane protein; ribonuclease BN complement(2103653..2104984) Ralstonia pickettii 12J 6289852 YP_001899562.1 CDS Rpic_1995 NC_010682.1 2105053 2105646 D TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: rso:RSc1558 probable TRP repressor binding protein; flavoprotein WrbA 2105053..2105646 Ralstonia pickettii 12J 6289853 YP_001899563.1 CDS Rpic_1996 NC_010682.1 2105643 2106035 D KEGG: rso:RSc1557 probable transmembrane protein; hypothetical protein 2105643..2106035 Ralstonia pickettii 12J 6286597 YP_001899564.1 CDS Rpic_1997 NC_010682.1 2106042 2107454 D PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc1556 probable oxidoreductase protein; FAD linked oxidase domain-containing protein 2106042..2107454 Ralstonia pickettii 12J 6286598 YP_001899565.1 CDS Rpic_1998 NC_010682.1 2107472 2107675 R KEGG: rso:RSc1555 hypothetical protein; hypothetical protein complement(2107472..2107675) Ralstonia pickettii 12J 6286599 YP_001899566.1 CDS Rpic_1999 NC_010682.1 2108046 2108243 D KEGG: ava:Ava_1781 hypothetical protein; hypothetical protein 2108046..2108243 Ralstonia pickettii 12J 6286600 YP_001899567.1 CDS Rpic_2000 NC_010682.1 2108587 2109090 R PFAM: OmpA/MotB domain protein; KEGG: bpd:BURPS668_A0328 OmpA domain protein; OmpA/MotB domain-containing protein complement(2108587..2109090) Ralstonia pickettii 12J 6289375 YP_001899568.1 CDS Rpic_2001 NC_010682.1 2109099 2109569 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bte:BTH_I2859 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2109099..2109569) Ralstonia pickettii 12J 6289376 YP_001899569.1 CDS Rpic_2002 NC_010682.1 2109715 2111193 D PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; protein of unknown function DUF442; KEGG: bur:Bcep18194_B2744 hypothetical protein; class V aminotransferase 2109715..2111193 Ralstonia pickettii 12J 6286839 YP_001899570.1 CDS Rpic_2003 NC_010682.1 2111221 2111742 R PFAM: regulatory protein AsnC/Lrp family; KEGG: rso:RS05577 probable transcription regulator protein; AsnC family transcriptional regulator complement(2111221..2111742) Ralstonia pickettii 12J 6286840 YP_001899571.1 CDS Rpic_2004 NC_010682.1 2111888 2112904 D catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 2111888..2112904 Ralstonia pickettii 12J 6286841 YP_001899572.1 CDS Rpic_2006 NC_010682.1 2113473 2113892 D KEGG: reh:H16_A3187 hypothetical membrane associated protein; hypothetical protein 2113473..2113892 Ralstonia pickettii 12J 6286530 YP_001899573.1 CDS Rpic_2007 NC_010682.1 2113897 2114730 R PFAM: aldo/keto reductase; KEGG: reu:Reut_A2881 aldo/keto reductase; aldo/keto reductase complement(2113897..2114730) Ralstonia pickettii 12J 6286531 YP_001899574.1 CDS Rpic_2008 NC_010682.1 2114820 2116055 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rme:Rmet_4091 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(2114820..2116055) Ralstonia pickettii 12J 6286532 YP_001899575.1 CDS Rpic_2009 NC_010682.1 2116144 2116602 D PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rso:RS02983 putative transcription regulator protein; MerR family transcriptional regulator 2116144..2116602 Ralstonia pickettii 12J 6286533 YP_001899576.1 CDS Rpic_2010 NC_010682.1 2116692 2116991 D KEGG: reh:H16_B2022 hypothetical protein; hypothetical protein 2116692..2116991 Ralstonia pickettii 12J 6289266 YP_001899577.1 CDS Rpic_2011 NC_010682.1 2117009 2117650 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: reu:Reut_B3694 lysine exporter protein (LysE/YggA); Lysine exporter protein LysE/YggA complement(2117009..2117650) Ralstonia pickettii 12J 6289267 YP_001899578.1 CDS Rpic_2012 NC_010682.1 2117725 2118621 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 2117725..2118621 Ralstonia pickettii 12J 6289268 YP_001899579.1 CDS Rpic_2013 NC_010682.1 2118626 2119486 R PFAM: beta-lactamase domain protein; KEGG: rso:RSc1544 hypothetical protein; beta-lactamase domain-containing protein complement(2118626..2119486) Ralstonia pickettii 12J 6289269 YP_001899580.1 CDS Rpic_2014 NC_010682.1 2119588 2119953 D PFAM: regulatory protein ArsR; KEGG: rso:RSc1543 probable transcription regulator protein; ArsR family transcriptional regulator 2119588..2119953 Ralstonia pickettii 12J 6287880 YP_001899581.1 CDS Rpic_2015 NC_010682.1 2119956 2120777 D PFAM: protein of unknown function DUF81; KEGG: rso:RSc1541 probable transmembrane protein; hypothetical protein 2119956..2120777 Ralstonia pickettii 12J 6287881 YP_001899582.1 CDS Rpic_2016 NC_010682.1 2121027 2121500 D TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: rso:RSc1539 probable hydrolase protein; phosphohistidine phosphatase, SixA 2121027..2121500 Ralstonia pickettii 12J 6287883 YP_001899583.1 CDS Rpic_2017 NC_010682.1 2121628 2122461 D KEGG: rso:RSc1538 hypothetical protein; hypothetical protein 2121628..2122461 Ralstonia pickettii 12J 6287587 YP_001899584.1 CDS Rpic_2018 NC_010682.1 2122542 2124080 R PFAM: Ppx/GppA phosphatase; KEGG: rso:RSc1537 probable exopolyphosphatase protein; Ppx/GppA phosphatase complement(2122542..2124080) Ralstonia pickettii 12J 6287588 YP_001899585.1 CDS Rpic_2019 NC_010682.1 2124250 2126421 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2124250..2126421 Ralstonia pickettii 12J 6287589 YP_001899586.1 CDS Rpic_2020 NC_010682.1 2126504 2127832 R KEGG: rso:RSc1535 probable phosphate regulon two-component sensor kinase transcription regulator protein; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(2126504..2127832) Ralstonia pickettii 12J 6286881 YP_001899587.1 CDS Rpic_2021 NC_010682.1 2127927 2128640 R TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc1534 probable phosphate regulon two-component response regulator transcription regulator protein; winged helix family two component transcriptional regulator complement(2127927..2128640) Ralstonia pickettii 12J 6286882 YP_001899588.1 CDS Rpic_2022 NC_010682.1 2128665 2129378 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rso:RSc1533 probable phosphate transport system protein; phosphate uptake regulator PhoU complement(2128665..2129378) Ralstonia pickettii 12J 6286883 YP_001899589.1 CDS pstB NC_010682.1 2129419 2130210 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(2129419..2130210) Ralstonia pickettii 12J 6286884 YP_001899590.1 CDS pstA NC_010682.1 2130207 2131091 R Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA complement(2130207..2131091) Ralstonia pickettii 12J 6287748 YP_001899591.1 CDS pstC NC_010682.1 2131130 2132104 R part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC complement(2131130..2132104) Ralstonia pickettii 12J 6287749 YP_001899592.1 CDS Rpic_2026 NC_010682.1 2132225 2133256 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1529 probable phosphate-binding periplasmic (PBP) ABC transporter protein; phosphate ABC transporter substrate-binding protein complement(2132225..2133256) Ralstonia pickettii 12J 6287750 YP_001899593.1 CDS glmM NC_010682.1 2133448 2134791 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(2133448..2134791) Ralstonia pickettii 12J 6287751 YP_001899594.1 CDS Rpic_2028 NC_010682.1 2134901 2135698 R KEGG: rso:RSc1527 probable 7,8-dihydropteroate synthase protein; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(2134901..2135698) Ralstonia pickettii 12J 6287436 YP_001899595.1 CDS Rpic_2029 NC_010682.1 2135918 2137804 R KEGG: rso:RSc1526 probable ATP-dependent zinc metallopeptidase (cell division FtsH) transmembrane protein; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(2135918..2137804) Ralstonia pickettii 12J 6287437 YP_001899596.1 CDS Rpic_2030 NC_010682.1 2137937 2138602 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: rso:RSc1525 probable ribosomal RNA large subunit methyltransferase J (cell division protein FtsJ); ribosomal RNA methyltransferase RrmJ/FtsJ complement(2137937..2138602) Ralstonia pickettii 12J 6287438 YP_001899597.1 CDS Rpic_2031 NC_010682.1 2138711 2139211 D PFAM: protein of unknown function UPF0044; KEGG: rso:RSc1524 hypothetical protein; hypothetical protein 2138711..2139211 Ralstonia pickettii 12J 6287439 YP_001899598.1 CDS Rpic_2032 NC_010682.1 2139269 2139736 R KEGG: rso:RSc1523 probable transmembrane protein; hypothetical protein complement(2139269..2139736) Ralstonia pickettii 12J 6288679 YP_001899599.1 CDS greA NC_010682.1 2139757 2140233 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(2139757..2140233) Ralstonia pickettii 12J 6288680 YP_001899600.1 CDS carB NC_010682.1 2140433 2143678 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(2140433..2143678) Ralstonia pickettii 12J 6288681 YP_001899601.1 CDS Rpic_2035 NC_010682.1 2143695 2144369 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc1520 leucine export protein LeuE; leucine export protein LeuE complement(2143695..2144369) Ralstonia pickettii 12J 6288682 YP_001899602.1 CDS Rpic_2036 NC_010682.1 2144391 2145527 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(2144391..2145527) Ralstonia pickettii 12J 6288453 YP_001899603.1 CDS prpE NC_010682.1 2145873 2147774 R catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; propionyl-CoA synthetase complement(2145873..2147774) Ralstonia pickettii 12J 6288454 YP_001899604.1 CDS Rpic_2038 NC_010682.1 2147919 2149469 R PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: rso:RSc1516 putative membrane-bound lytic murein transglycosylase-like lipoprotein; MLTD_N domain-containing protein complement(2147919..2149469) Ralstonia pickettii 12J 6288455 YP_001899605.1 CDS Rpic_2039 NC_010682.1 2149608 2150447 R KEGG: rso:RSc1515 putative hydroxyacylglutathione hydrolase protein; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase complement(2149608..2150447) Ralstonia pickettii 12J 6288456 YP_001899606.1 CDS Rpic_2040 NC_010682.1 2150563 2151351 D PFAM: Methyltransferase type 11; KEGG: rso:RSc1514 hypothetical protein; type 11 methyltransferase 2150563..2151351 Ralstonia pickettii 12J 6286773 YP_001899607.1 CDS rnhA NC_010682.1 2151391 2151837 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2151391..2151837 Ralstonia pickettii 12J 6286774 YP_001899608.1 CDS Rpic_2042 NC_010682.1 2151855 2152364 R KEGG: cvi:CV_1202 probable ribonuclease precursor; hypothetical protein complement(2151855..2152364) Ralstonia pickettii 12J 6286775 YP_001899609.1 CDS Rpic_2043 NC_010682.1 2152406 2152858 R PFAM: glycoside hydrolase family 24; KEGG: bam:Bamb_4258 lysozyme; lysozyme complement(2152406..2152858) Ralstonia pickettii 12J 6286776 YP_001899610.1 CDS Rpic_2044 NC_010682.1 2152848 2153600 R KEGG: bam:Bamb_4257 hypothetical protein; hypothetical protein complement(2152848..2153600) Ralstonia pickettii 12J 6287728 YP_001899611.1 CDS Rpic_2045 NC_010682.1 2153710 2154378 R KEGG: bam:Bamb_4256 hypothetical protein; hypothetical protein complement(2153710..2154378) Ralstonia pickettii 12J 6287729 YP_001899612.1 CDS Rpic_2046 NC_010682.1 2154627 2155286 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: bam:Bamb_4255 transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2154627..2155286 Ralstonia pickettii 12J 6287730 YP_001899613.1 CDS Rpic_2047 NC_010682.1 2155459 2155737 D KEGG: rso:RSc1512 hypothetical protein; hypothetical protein 2155459..2155737 Ralstonia pickettii 12J 6287731 YP_001899614.1 CDS Rpic_2048 NC_010682.1 2155828 2157336 R PFAM: SpoVR family protein; KEGG: rme:Rmet_3906 hypothetical protein; SpoVR family protein complement(2155828..2157336) Ralstonia pickettii 12J 6288955 YP_001899615.1 CDS Rpic_2049 NC_010682.1 2157454 2158716 R PFAM: protein of unknown function DUF444; KEGG: reu:Reut_B3554 hypothetical protein; hypothetical protein complement(2157454..2158716) Ralstonia pickettii 12J 6288956 YP_001899616.1 CDS Rpic_2050 NC_010682.1 2158772 2160694 R PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: reh:H16_B0700 serine protein kinase; putative serine protein kinase PrkA complement(2158772..2160694) Ralstonia pickettii 12J 6288957 YP_001899617.1 CDS Rpic_2051 NC_010682.1 2161563 2162465 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A1704 transcriptional regulator, LysR-family; LysR family transcriptional regulator complement(2161563..2162465) Ralstonia pickettii 12J 6288958 YP_001899618.1 CDS Rpic_2052 NC_010682.1 2162744 2165779 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; cyclase/dehydrase; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; carbon monoxide dehydrogenase subunit G; KEGG: reu:Reut_C5890 carbon-monoxide dehydrogenase; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase 2162744..2165779 Ralstonia pickettii 12J 6288572 YP_001899619.1 CDS Rpic_2053 NC_010682.1 2165776 2166591 D PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: reh:H16_A1702 FAD binding domain in molybdopterin dehydrogenase; Carbon-monoxide dehydrogenase 2165776..2166591 Ralstonia pickettii 12J 6288573 YP_001899620.1 CDS Rpic_2054 NC_010682.1 2166588 2167163 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: reu:Reut_C5888 ferredoxin:(2Fe-2S)-binding; (2Fe-2S)-binding domain-containing protein 2166588..2167163 Ralstonia pickettii 12J 6288574 YP_001899621.1 CDS Rpic_2055 NC_010682.1 2167156 2168574 D PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_A1700 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; AMP-dependent synthetase and ligase 2167156..2168574 Ralstonia pickettii 12J 6288575 YP_001899622.1 CDS Rpic_2056 NC_010682.1 2168571 2168723 D hypothetical protein 2168571..2168723 Ralstonia pickettii 12J 6288327 YP_001899623.1 CDS Rpic_2057 NC_010682.1 2168720 2168977 D hypothetical protein 2168720..2168977 Ralstonia pickettii 12J 6288328 YP_001899624.1 CDS Rpic_2058 NC_010682.1 2169363 2169887 D KEGG: reu:Reut_C6251 transferase hexapeptide repeat; transferase hexapeptide repeat containing protein 2169363..2169887 Ralstonia pickettii 12J 6288329 YP_001899625.1 CDS Rpic_2059 NC_010682.1 2170009 2171064 D PFAM: porin Gram-negative type; KEGG: reu:Reut_C6252 porin, gram-negative type; porin 2170009..2171064 Ralstonia pickettii 12J 6288330 YP_001899626.1 CDS Rpic_2060 NC_010682.1 2171152 2172306 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rso:RS03121 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F complement(2171152..2172306) Ralstonia pickettii 12J 6287201 YP_001899627.1 CDS Rpic_2061 NC_010682.1 2172312 2173292 R PFAM: pyruvate carboxyltransferase; KEGG: reh:H16_B2494 hydroxymethylglutaryl-CoA lyase; pyruvate carboxyltransferase complement(2172312..2173292) Ralstonia pickettii 12J 6287202 YP_001899628.1 CDS Rpic_2062 NC_010682.1 2173490 2174458 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2495 transcriptional regulator, LysR-family; LysR family transcriptional regulator 2173490..2174458 Ralstonia pickettii 12J 6287203 YP_001899629.1 CDS Rpic_2063 NC_010682.1 2174481 2175920 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_6282 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2174481..2175920) Ralstonia pickettii 12J 6287204 YP_001899630.1 CDS Rpic_2064 NC_010682.1 2176267 2178228 R KEGG: bvi:Bcep1808_7565 integral membrane protein; integral membrane protein complement(2176267..2178228) Ralstonia pickettii 12J 6286715 YP_001899631.1 CDS Rpic_2065 NC_010682.1 2178362 2178613 D KEGG: bam:Bamb_4523 hypothetical protein; hypothetical protein 2178362..2178613 Ralstonia pickettii 12J 6286716 YP_001899632.1 CDS Rpic_2066 NC_010682.1 2179151 2179444 R PFAM: transposase IS3/IS911 family protein; KEGG: mlo:msr5972 transposase; transposase IS3/IS911 family protein complement(2179151..2179444) Ralstonia pickettii 12J 6286717 YP_001899633.1 CDS Rpic_2067 NC_010682.1 2179472 2179663 R hypothetical protein complement(2179472..2179663) Ralstonia pickettii 12J 6286718 YP_001899634.1 CDS Rpic_2068 NC_010682.1 2179660 2179995 R hypothetical protein complement(2179660..2179995) Ralstonia pickettii 12J 6287524 YP_001899635.1 CDS Rpic_2069 NC_010682.1 2179992 2180141 R hypothetical protein complement(2179992..2180141) Ralstonia pickettii 12J 6287525 YP_001899636.1 CDS Rpic_2070 NC_010682.1 2180138 2180368 R KEGG: dar:Daro_2699 hypothetical protein; hypothetical protein complement(2180138..2180368) Ralstonia pickettii 12J 6287526 YP_001899637.1 CDS Rpic_2071 NC_010682.1 2180452 2181246 R KEGG: vvu:VV1_2541 hypothetical protein; hypothetical protein complement(2180452..2181246) Ralstonia pickettii 12J 6287527 YP_001899638.1 CDS Rpic_2072 NC_010682.1 2181268 2182491 R PFAM: integrase family protein; KEGG: rso:RSc1871 putative integrase prophage protein; integrase family protein complement(2181268..2182491) Ralstonia pickettii 12J 6288136 YP_001899639.1 CDS Rpic_2073 NC_010682.1 2182803 2183531 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(2182803..2183531) Ralstonia pickettii 12J 6288138 YP_001899640.1 CDS purU NC_010682.1 2183555 2184421 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(2183555..2184421) Ralstonia pickettii 12J 6286914 YP_001899641.1 CDS Rpic_2075 NC_010682.1 2184430 2185284 R PFAM: NUDIX hydrolase; KEGG: rso:RSc1874 hypothetical protein; NUDIX hydrolase complement(2184430..2185284) Ralstonia pickettii 12J 6286915 YP_001899642.1 CDS Rpic_2076 NC_010682.1 2185389 2185784 D KEGG: rso:RSc1875 hypothetical protein; hypothetical protein 2185389..2185784 Ralstonia pickettii 12J 6286916 YP_001899643.1 CDS Rpic_2077 NC_010682.1 2185810 2186370 R KEGG: rso:RSc1876 hypothetical protein; hypothetical protein complement(2185810..2186370) Ralstonia pickettii 12J 6286917 YP_001899644.1 CDS Rpic_2078 NC_010682.1 2186631 2187533 D PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: rso:RSc1877 putative aspartyl/asparaginyl beta-hydroxylase transmembrane protein; aspartyl/asparaginyl beta-hydroxylase 2186631..2187533 Ralstonia pickettii 12J 6289559 YP_001899645.1 CDS Rpic_2079 NC_010682.1 2187846 2188463 D KEGG: rso:RSc1878 putative lipoprotein; putative lipoprotein 2187846..2188463 Ralstonia pickettii 12J 6289560 YP_001899646.1 CDS Rpic_2080 NC_010682.1 2188677 2189828 D PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc1879 putative amino acids-binding transmembrane protein; extracellular ligand-binding receptor 2188677..2189828 Ralstonia pickettii 12J 6289561 YP_001899647.1 CDS Rpic_2081 NC_010682.1 2189991 2190965 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1880 probable transcription regulator protein; LysR family transcriptional regulator 2189991..2190965 Ralstonia pickettii 12J 6289562 YP_001899648.1 CDS Rpic_2082 NC_010682.1 2190962 2192461 D PFAM: FAD dependent oxidoreductase; KEGG: rso:RSc1881 putative transmembrane oxidoreductase protein; FAD dependent oxidoreductase 2190962..2192461 Ralstonia pickettii 12J 6287165 YP_001899649.1 CDS Rpic_2083 NC_010682.1 2192458 2193441 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1882 probable dipeptide transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2192458..2193441 Ralstonia pickettii 12J 6287166 YP_001899650.1 CDS Rpic_2084 NC_010682.1 2193438 2194367 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1883 probable dipeptide transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2193438..2194367 Ralstonia pickettii 12J 6287167 YP_001899651.1 CDS Rpic_2085 NC_010682.1 2194364 2195368 D KEGG: rso:RSc1884 probable oligopeptide ATP-binding ABC transporter protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2194364..2195368 Ralstonia pickettii 12J 6287168 YP_001899652.1 CDS Rpic_2086 NC_010682.1 2195365 2196366 D KEGG: rso:RSc1885 probable oligopeptide ATP-binding ABC transporter protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2195365..2196366 Ralstonia pickettii 12J 6287532 YP_001899653.1 CDS Rpic_2087 NC_010682.1 2196417 2197985 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc1886 probable periplasmic dipeptide transport protein precursor; family 5 extracellular solute-binding protein 2196417..2197985 Ralstonia pickettii 12J 6287533 YP_001899654.1 CDS Rpic_2088 NC_010682.1 2197991 2199871 D PFAM: acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase; BAAT/Acyl-CoA thioester hydrolase; KEGG: rso:RSc1887 putative acyl coenzyme A thioester hydrolase protein; Bile acid-CoA:amino acid N-acyltransferase 2197991..2199871 Ralstonia pickettii 12J 6287534 YP_001899655.1 CDS Rpic_2089 NC_010682.1 2199868 2200458 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rso:RSc1888 hypothetical protein; peroxidase-like protein 2199868..2200458 Ralstonia pickettii 12J 6287535 YP_001899656.1 CDS Rpic_2090 NC_010682.1 2200531 2202828 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rso:RSc1889 probable transmembrane isoquinoline 1-oxidoreductase (beta subunit) oxidoreductase protein; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase complement(2200531..2202828) Ralstonia pickettii 12J 6289583 YP_001899657.1 CDS Rpic_2091 NC_010682.1 2202825 2203292 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rso:RSc1890 probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein; (2Fe-2S)-binding domain-containing protein complement(2202825..2203292) Ralstonia pickettii 12J 6289584 YP_001899658.1 CDS Rpic_2092 NC_010682.1 2203666 2203947 R KEGG: rso:RSc1891 hypothetical protein; hypothetical protein complement(2203666..2203947) Ralstonia pickettii 12J 6289586 YP_001899659.1 CDS Rpic_2093 NC_010682.1 2204475 2206481 D PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: rha:RHA1_ro04896 hypothetical protein; peptidase S15 2204475..2206481 Ralstonia pickettii 12J 6287940 YP_001899660.1 CDS Rpic_2094 NC_010682.1 2206699 2206866 D hypothetical protein 2206699..2206866 Ralstonia pickettii 12J 6287941 YP_001899661.1 CDS Rpic_2095 NC_010682.1 2207007 2208569 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A4301 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2207007..2208569 Ralstonia pickettii 12J 6287942 YP_001899662.1 CDS Rpic_2096 NC_010682.1 2208886 2209914 D KEGG: bam:Bamb_4254 hypothetical protein; hypothetical protein 2208886..2209914 Ralstonia pickettii 12J 6289830 YP_001899663.1 CDS Rpic_2097 NC_010682.1 2209919 2210722 D KEGG: mkm:Mkms_3043 hypothetical protein; hypothetical protein 2209919..2210722 Ralstonia pickettii 12J 6289831 YP_001899664.1 CDS Rpic_2098 NC_010682.1 2210844 2212907 R TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: rso:RSc1951 probable solute:Na+ symporter permease transmembrane protein; sodium solute transporter superfamily protein complement(2210844..2212907) Ralstonia pickettii 12J 6289832 YP_001899665.1 CDS Rpic_2099 NC_010682.1 2212930 2214912 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(2212930..2214912) Ralstonia pickettii 12J 6289833 YP_001899666.1 CDS Rpic_2100 NC_010682.1 2215149 2216087 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc1953 probable transmembrane protein; hypothetical protein 2215149..2216087 Ralstonia pickettii 12J 6288186 YP_001899667.1 CDS Rpic_2101 NC_010682.1 2216177 2216716 D PFAM: conserved hypothetical protein; KEGG: rso:RSc1954 hypothetical protein; hypothetical protein 2216177..2216716 Ralstonia pickettii 12J 6288187 YP_001899668.1 CDS Rpic_2102 NC_010682.1 2216906 2218429 D TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: rso:RSc1955 probable fumarate hydratase protein; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 2216906..2218429 Ralstonia pickettii 12J 6288188 YP_001899669.1 CDS Rpic_2103 NC_010682.1 2218450 2219298 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 2218450..2219298 Ralstonia pickettii 12J 6288189 YP_001899670.1 CDS Rpic_2104 NC_010682.1 2219359 2220636 R PFAM: sodium:dicarboxylate symporter; KEGG: rso:RSc1957 putative glutamate symport transmembrane protein; sodium:dicarboxylate symporter complement(2219359..2220636) Ralstonia pickettii 12J 6287057 YP_001899671.1 CDS Rpic_2105 NC_010682.1 2221005 2221346 D KEGG: rso:RSc1958 hypothetical protein; hypothetical protein 2221005..2221346 Ralstonia pickettii 12J 6287058 YP_001899672.1 CDS Rpic_2106 NC_010682.1 2221483 2223546 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 2221483..2223546 Ralstonia pickettii 12J 6287059 YP_001899673.1 CDS Rpic_2107 NC_010682.1 2223543 2223719 D KEGG: rso:RS02295 hypothetical protein; hypothetical protein 2223543..2223719 Ralstonia pickettii 12J 6287060 YP_001899674.1 CDS Rpic_2108 NC_010682.1 2223682 2224395 D TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: rso:RSp0965 putative ribonucleotide reductase activating transmembrane protein; anaerobic ribonucleoside-triphosphate reductase activating protein 2223682..2224395 Ralstonia pickettii 12J 6286432 YP_001899675.1 CDS Rpic_2109 NC_010682.1 2224400 2225077 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rso:RS02297 probable transcription regulator protein; Crp/Fnr family transcriptional regulator 2224400..2225077 Ralstonia pickettii 12J 6286433 YP_001899676.1 CDS Rpic_2110 NC_010682.1 2225098 2225487 R PFAM: DGC domain protein; KEGG: rso:RS02298 putative lipoprotein; DGC domain-containing protein complement(2225098..2225487) Ralstonia pickettii 12J 6286434 YP_001899677.1 CDS Rpic_2111 NC_010682.1 2225501 2225926 R KEGG: rso:RS02299 hypothetical protein; hypothetical protein complement(2225501..2225926) Ralstonia pickettii 12J 6286435 YP_001899678.1 CDS Rpic_2112 NC_010682.1 2225923 2226807 R PFAM: peptidase U32; KEGG: rso:RS02300 hypothetical protein; peptidase U32 complement(2225923..2226807) Ralstonia pickettii 12J 6286827 YP_001899679.1 CDS Rpic_2113 NC_010682.1 2226818 2227834 R PFAM: peptidase U32; KEGG: rso:RS02301 probable protease protein; peptidase U32 complement(2226818..2227834) Ralstonia pickettii 12J 6286828 YP_001899680.1 CDS Rpic_2114 NC_010682.1 2227880 2229160 R KEGG: rso:RS02303 probable transmembrane protein; hypothetical protein complement(2227880..2229160) Ralstonia pickettii 12J 6286829 YP_001899681.1 CDS Rpic_2115 NC_010682.1 2229236 2231557 R PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RSc1961 putative ATPase protein; ATPase AAA complement(2229236..2231557) Ralstonia pickettii 12J 6286830 YP_001899682.1 CDS Rpic_2116 NC_010682.1 2232073 2232729 D TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rso:RSc1963 probable TonB transmembrane protein; TonB family protein 2232073..2232729 Ralstonia pickettii 12J 6286761 YP_001899683.1 CDS Rpic_2117 NC_010682.1 2232779 2233507 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: rso:RSc1964 probable biopolymer transport transmembrane protein; MotA/TolQ/ExbB proton channel 2232779..2233507 Ralstonia pickettii 12J 6286762 YP_001899684.1 CDS Rpic_2118 NC_010682.1 2233517 2233927 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rso:RSc1965 probable biopolymer transport transmembrane protein; biopolymer transport protein ExbD/TolR 2233517..2233927 Ralstonia pickettii 12J 6286763 YP_001899685.1 CDS Rpic_2119 NC_010682.1 2234148 2234456 D KEGG: rso:RSc1966 putative hemin uptake protein; putative hemin uptake protein 2234148..2234456 Ralstonia pickettii 12J 6286764 YP_001899686.1 CDS Rpic_2120 NC_010682.1 2234714 2235127 R PFAM: protein of unknown function DUF336; KEGG: rso:RSc1967 probable GlcG protein; hypothetical protein complement(2234714..2235127) Ralstonia pickettii 12J 6288505 YP_001899687.1 CDS Rpic_2121 NC_010682.1 2235437 2235688 R KEGG: reu:Reut_B5572 hypothetical protein; hypothetical protein complement(2235437..2235688) Ralstonia pickettii 12J 6288506 YP_001899688.1 CDS Rpic_2122 NC_010682.1 2235703 2235846 R hypothetical protein complement(2235703..2235846) Ralstonia pickettii 12J 6288507 YP_001899689.1 CDS Rpic_2123 NC_010682.1 2235937 2236284 R KEGG: rso:RSc1969 probable transmembrane protein; hypothetical protein complement(2235937..2236284) Ralstonia pickettii 12J 6288508 YP_001899690.1 CDS Rpic_2124 NC_010682.1 2236419 2236658 R KEGG: rso:RSc1970 hypothetical protein; hypothetical protein complement(2236419..2236658) Ralstonia pickettii 12J 6289282 YP_001899691.1 CDS Rpic_2125 NC_010682.1 2236919 2237428 R TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: rso:RSc1972 putative phasin protein; phasin family protein complement(2236919..2237428) Ralstonia pickettii 12J 6289283 YP_001899692.1 CDS Rpic_2126 NC_010682.1 2237618 2238028 D PFAM: PRC-barrel domain protein; KEGG: dac:Daci_4398 PRC-barrel domain protein; PRC-barrel domain-containing protein 2237618..2238028 Ralstonia pickettii 12J 6289284 YP_001899693.1 CDS Rpic_2127 NC_010682.1 2238168 2238368 D KEGG: rso:RSc1973 putative osmotically inducible lipoprotein B1 transmembrane; putative osmotically inducible lipoprotein B1 transmembrane 2238168..2238368 Ralstonia pickettii 12J 6289285 YP_001899694.1 CDS Rpic_2128 NC_010682.1 2238528 2239490 D involved in the export of lipooligosaccharides during nodulation; nodulation ABC transporter NodI 2238528..2239490 Ralstonia pickettii 12J 6289187 YP_001899695.1 CDS Rpic_2129 NC_010682.1 2239502 2240323 D TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: rso:RSc1975 putative transmembrane permease ABC transporter protein; NodJ family ABC-2 type transporter 2239502..2240323 Ralstonia pickettii 12J 6289188 YP_001899696.1 CDS Rpic_2130 NC_010682.1 2240390 2241925 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(2240390..2241925) Ralstonia pickettii 12J 6289189 YP_001899697.1 CDS Rpic_2131 NC_010682.1 2242024 2242521 R PFAM: Colicin V production protein; KEGG: rso:RSc1977 probable colicin V production transmembrane protein; colicin V production protein complement(2242024..2242521) Ralstonia pickettii 12J 6289190 YP_001899698.1 CDS Rpic_2132 NC_010682.1 2242612 2243472 R PFAM: Sporulation domain protein; KEGG: rso:RSc1978 probable transmembrane protein; sporulation domain-containing protein complement(2242612..2243472) Ralstonia pickettii 12J 6287061 YP_001899699.1 CDS Rpic_2133 NC_010682.1 2243486 2244784 R TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rso:RSc1979 probable bifunctional protein: folylpolyglutamate synthase and dihydrofolate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(2243486..2244784) Ralstonia pickettii 12J 6287062 YP_001899700.1 CDS Rpic_2134 NC_010682.1 2244878 2245750 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(2244878..2245750) Ralstonia pickettii 12J 6287063 YP_001899701.1 CDS trpA NC_010682.1 2245781 2246578 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(2245781..2246578) Ralstonia pickettii 12J 6287064 YP_001899702.1 CDS Rpic_2136 NC_010682.1 2246593 2247414 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rso:RSc1982 probable DNA-methyltransferase (DNA-modification methylase) protein; DNA methylase N-4/N-6 domain-containing protein complement(2246593..2247414) Ralstonia pickettii 12J 6287812 YP_001899703.1 CDS Rpic_2137 NC_010682.1 2247431 2248624 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(2247431..2248624) Ralstonia pickettii 12J 6287813 YP_001899704.1 CDS Rpic_2138 NC_010682.1 2248721 2249422 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(2248721..2249422) Ralstonia pickettii 12J 6287814 YP_001899705.1 CDS truA NC_010682.1 2249437 2250261 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(2249437..2250261) Ralstonia pickettii 12J 6287815 YP_001899706.1 CDS Rpic_2140 NC_010682.1 2250345 2253251 R KEGG: rso:RSc1986 probable transmembrane protein; hypothetical protein complement(2250345..2253251) Ralstonia pickettii 12J 6288075 YP_001899707.1 CDS Rpic_2141 NC_010682.1 2253639 2254742 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(2253639..2254742) Ralstonia pickettii 12J 6288076 YP_001899708.1 CDS Rpic_2142 NC_010682.1 2254825 2255064 R hypothetical protein complement(2254825..2255064) Ralstonia pickettii 12J 6288077 YP_001899709.1 CDS Rpic_2143 NC_010682.1 2255083 2256153 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(2255083..2256153) Ralstonia pickettii 12J 6288078 YP_001899710.1 CDS leuD NC_010682.1 2256183 2256833 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(2256183..2256833) Ralstonia pickettii 12J 6286227 YP_001899711.1 CDS Rpic_2145 NC_010682.1 2256857 2258266 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(2256857..2258266) Ralstonia pickettii 12J 6286228 YP_001899712.1 CDS gltA NC_010682.1 2258491 2259792 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(2258491..2259792) Ralstonia pickettii 12J 6286229 YP_001899713.1 CDS Rpic_2147 NC_010682.1 2259914 2260201 R PFAM: protein of unknown function DUF339; KEGG: rso:RSc1992 hypothetical protein; hypothetical protein complement(2259914..2260201) Ralstonia pickettii 12J 6286230 YP_001899714.1 CDS sdhB NC_010682.1 2260273 2260974 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(2260273..2260974) Ralstonia pickettii 12J 6287860 YP_001899715.1 CDS sdhA NC_010682.1 2260997 2262775 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(2260997..2262775) Ralstonia pickettii 12J 6287861 YP_001899716.1 CDS Rpic_2150 NC_010682.1 2262779 2263144 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rso:RSc1995 putative transmembrane succinate dehydrogenase (hydrophobic membrane anchor subunit) oxidoreductase protein; succinate dehydrogenase, hydrophobic membrane anchor protein complement(2262779..2263144) Ralstonia pickettii 12J 6287862 YP_001899717.1 CDS Rpic_2151 NC_010682.1 2263155 2263565 R TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rso:RSc1996 putative transmembrane succinate dehydrogenase (cytochrome b-556 subunit) oxidoreductase protein; succinate dehydrogenase, cytochrome b556 subunit complement(2263155..2263565) Ralstonia pickettii 12J 6287863 YP_001899718.1 CDS Rpic_2152 NC_010682.1 2263838 2264647 R PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: rso:RSc1997 probable transcription regulator protein; GntR family transcriptional regulator complement(2263838..2264647) Ralstonia pickettii 12J 6286693 YP_001899719.1 CDS Rpic_2153 NC_010682.1 2265000 2265986 D catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 2265000..2265986 Ralstonia pickettii 12J 6286694 YP_001899720.1 CDS Rpic_2154 NC_010682.1 2266103 2267083 D PFAM: HpcH/HpaI aldolase; KEGG: rso:RSc1999 probable lyase protein; HpcH/HpaI aldolase 2266103..2267083 Ralstonia pickettii 12J 6286695 YP_001899721.1 CDS prpB NC_010682.1 2267107 2268003 D catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 2267107..2268003 Ralstonia pickettii 12J 6286696 YP_001899722.1 CDS Rpic_2156 NC_010682.1 2268260 2268814 D KEGG: rso:RSc2001 probable signal peptide protein; putative signal peptide protein 2268260..2268814 Ralstonia pickettii 12J 6287621 YP_001899723.1 CDS Rpic_2157 NC_010682.1 2268850 2269248 D KEGG: rso:RSc2002 2-methylcitrate dehydratase; hypothetical protein 2268850..2269248 Ralstonia pickettii 12J 6287622 YP_001899724.1 CDS acnA NC_010682.1 2269325 2272030 D catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2269325..2272030 Ralstonia pickettii 12J 6287623 YP_001899725.1 CDS Rpic_2159 NC_010682.1 2272248 2272529 D KEGG: mmu:100042292 similar to CG10953-PA; hypothetical protein 2272248..2272529 Ralstonia pickettii 12J 6287624 YP_001899726.1 CDS Rpic_2160 NC_010682.1 2272627 2273838 D KEGG: rso:RSc2005 hypothetical protein; hypothetical protein 2272627..2273838 Ralstonia pickettii 12J 6289758 YP_001899727.1 CDS Rpic_2161 NC_010682.1 2274001 2275599 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc2006 probable transport binding transmembrane protein; family 5 extracellular solute-binding protein 2274001..2275599 Ralstonia pickettii 12J 6289759 YP_001899728.1 CDS Rpic_2162 NC_010682.1 2275756 2276592 D KEGG: rso:RSc2007 probable lipoprotein transmembrane; putative transmembrane lipoprotein 2275756..2276592 Ralstonia pickettii 12J 6289760 YP_001899729.1 CDS Rpic_2163 NC_010682.1 2276633 2277778 R PFAM: peptidase M14 carboxypeptidase A; KEGG: rso:RSc2008 hypothetical protein; peptidase M14 carboxypeptidase A complement(2276633..2277778) Ralstonia pickettii 12J 6289761 YP_001899730.1 CDS Rpic_2164 NC_010682.1 2277793 2278566 R PFAM: protein of unknown function DUF328; KEGG: rso:RSc2009 hypothetical protein; hypothetical protein complement(2277793..2278566) Ralstonia pickettii 12J 6287816 YP_001899731.1 CDS Rpic_2165 NC_010682.1 2278604 2279128 D SMART: Nucleotide binding protein PINc; KEGG: rso:RSc2010 hypothetical protein; Nucleotide binding protein PINc 2278604..2279128 Ralstonia pickettii 12J 6287817 YP_001899732.1 CDS Rpic_2166 NC_010682.1 2279141 2280313 D catalyzes the transfer of an amino moiety; putative aminotransferase 2279141..2280313 Ralstonia pickettii 12J 6287818 YP_001899733.1 CDS Rpic_2167 NC_010682.1 2280334 2280987 R KEGG: rso:RSc2012 probable GST-related protein; putative GST-like protein complement(2280334..2280987) Ralstonia pickettii 12J 6287819 YP_001899734.1 CDS Rpic_2168 NC_010682.1 2281097 2282605 D converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxyacyl-CoA dehydrogenase 2281097..2282605 Ralstonia pickettii 12J 6286813 YP_001899735.1 CDS Rpic_2169 NC_010682.1 2282639 2283418 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2282639..2283418 Ralstonia pickettii 12J 6286814 YP_001899736.1 CDS Rpic_2170 NC_010682.1 2283431 2284165 D PFAM: Phosphoglycerate mutase; KEGG: rso:RSc2015 putative phosphoglycerate mutase protein; phosphoglycerate mutase 2283431..2284165 Ralstonia pickettii 12J 6286815 YP_001899737.1 CDS Rpic_2171 NC_010682.1 2284204 2285292 D PFAM: aminoglycoside phosphotransferase; KEGG: rso:RSc2016 hypothetical protein; aminoglycoside phosphotransferase 2284204..2285292 Ralstonia pickettii 12J 6286816 YP_001899738.1 CDS Rpic_2172 NC_010682.1 2285303 2285707 R KEGG: rso:RSc2017 hypothetical protein; hypothetical protein complement(2285303..2285707) Ralstonia pickettii 12J 6289013 YP_001899739.1 CDS Rpic_2173 NC_010682.1 2285704 2286417 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cvi:CV_2810 probable oxidoreductase; short-chain dehydrogenase/reductase SDR complement(2285704..2286417) Ralstonia pickettii 12J 6289014 YP_001899740.1 CDS Rpic_2174 NC_010682.1 2286542 2287537 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_4064 transcriptional regulator, LysR family; LysR family transcriptional regulator 2286542..2287537 Ralstonia pickettii 12J 6289015 YP_001899741.1 CDS Rpic_2175 NC_010682.1 2287722 2288666 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2018 probable transcription regulator protein; LysR family transcriptional regulator complement(2287722..2288666) Ralstonia pickettii 12J 6289016 YP_001899742.1 CDS Rpic_2176 NC_010682.1 2288760 2289197 D PFAM: thioesterase superfamily protein; KEGG: rso:RSc2019 probable signal peptide protein; thioesterase superfamily protein 2288760..2289197 Ralstonia pickettii 12J 6289859 YP_001899743.1 CDS Rpic_2177 NC_010682.1 2289274 2290533 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc2020 probable acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 2289274..2290533 Ralstonia pickettii 12J 6289860 YP_001899744.1 CDS Rpic_2178 NC_010682.1 2290703 2291395 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2021 putative GST-related protein; glutathione S-transferase domain-containing protein 2290703..2291395 Ralstonia pickettii 12J 6289861 YP_001899745.1 CDS Rpic_2179 NC_010682.1 2291512 2292171 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rso:RSc2022 probable transmembrane protein; isoprenylcysteine carboxyl methyltransferase 2291512..2292171 Ralstonia pickettii 12J 6289862 YP_001899746.1 CDS Rpic_2180 NC_010682.1 2292180 2292482 R hypothetical protein complement(2292180..2292482) Ralstonia pickettii 12J 6287331 YP_001899747.1 CDS Rpic_2181 NC_010682.1 2292559 2293179 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: rso:RSc2029 probable urease accessory protein; urease accessory protein UreG complement(2292559..2293179) Ralstonia pickettii 12J 6287332 YP_001899748.1 CDS Rpic_2182 NC_010682.1 2293191 2293880 R PFAM: Urease accessory protein UreF; KEGG: rso:RSc2030 probable urease accessory protein UreF; Urease accessory protein UreF complement(2293191..2293880) Ralstonia pickettii 12J 6287333 YP_001899749.1 CDS ureE NC_010682.1 2293873 2294499 R involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE complement(2293873..2294499) Ralstonia pickettii 12J 6287334 YP_001899750.1 CDS ureC NC_010682.1 2294686 2296404 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(2294686..2296404) Ralstonia pickettii 12J 6289147 YP_001899751.1 CDS Rpic_2185 NC_010682.1 2296418 2296723 R KEGG: rso:RSc2033 probable urease (beta subunit) protein; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; urease subunit beta complement(2296418..2296723) Ralstonia pickettii 12J 6289148 YP_001899752.1 CDS Rpic_2186 NC_010682.1 2296737 2297354 R PFAM: HupE/UreJ protein; KEGG: rso:RSc2034 probable urease accessory UreJ transmembrane protein; HupE/UreJ protein complement(2296737..2297354) Ralstonia pickettii 12J 6289149 YP_001899753.1 CDS ureA NC_010682.1 2297397 2297699 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(2297397..2297699) Ralstonia pickettii 12J 6289150 YP_001899754.1 CDS Rpic_2188 NC_010682.1 2297779 2298666 R PFAM: Urease accessory protein UreD; KEGG: rso:RSc2036 probable urease accessory protein UreD; Urease accessory protein UreD complement(2297779..2298666) Ralstonia pickettii 12J 6288959 YP_001899755.1 CDS Rpic_2189 NC_010682.1 2298769 2299461 R KEGG: rso:RSc2037 probable ATP-binding ABC transporter protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE complement(2298769..2299461) Ralstonia pickettii 12J 6288960 YP_001899756.1 CDS Rpic_2190 NC_010682.1 2299463 2300314 R TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: rso:RSc2038 probable ATP-binding ABC transporter protein; urea ABC transporter ATP-binding protein UrtD complement(2299463..2300314) Ralstonia pickettii 12J 6288961 YP_001899757.1 CDS Rpic_2191 NC_010682.1 2300311 2301477 R TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: rso:RSc2039 probable permease transporter transmembrane protein; urea ABC transporter permease UrtC complement(2300311..2301477) Ralstonia pickettii 12J 6288962 YP_001899758.1 CDS Rpic_2192 NC_010682.1 2301479 2303110 R TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: rso:RSc2040 probable permease transporter transmembrane protein; urea ABC transporter permease UrtB complement(2301479..2303110) Ralstonia pickettii 12J 6289687 YP_001899759.1 CDS Rpic_2193 NC_010682.1 2303211 2304467 R TIGRFAM: urea ABC transporter, urea binding protein; KEGG: rso:RSc2041 putative UreA/short-chain amide-binding signal peptide protein; urea ABC transporter urea binding protein complement(2303211..2304467) Ralstonia pickettii 12J 6289688 YP_001899760.1 CDS Rpic_2194 NC_010682.1 2304731 2305210 R PFAM: MaoC domain protein dehydratase; KEGG: rso:RSc2042 hypothetical protein; MaoC domain-containing protein dehydratase complement(2304731..2305210) Ralstonia pickettii 12J 6289689 YP_001899761.1 CDS Rpic_2195 NC_010682.1 2305248 2305733 R PFAM: MaoC domain protein dehydratase; KEGG: rso:RSc2043 hypothetical protein; MaoC domain-containing protein dehydratase complement(2305248..2305733) Ralstonia pickettii 12J 6289690 YP_001899762.1 CDS Rpic_2196 NC_010682.1 2305790 2306920 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc2044 putative acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(2305790..2306920) Ralstonia pickettii 12J 6288880 YP_001899763.1 CDS Rpic_2197 NC_010682.1 2306956 2308152 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rso:RSc2045 putative acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(2306956..2308152) Ralstonia pickettii 12J 6288881 YP_001899764.1 CDS Rpic_2198 NC_010682.1 2308237 2308698 R PFAM: protein of unknown function DUF1178; KEGG: rso:RSc2046 hypothetical protein; hypothetical protein complement(2308237..2308698) Ralstonia pickettii 12J 6288882 YP_001899765.1 CDS Rpic_2199 NC_010682.1 2308836 2309447 R PFAM: NUDIX hydrolase; KEGG: rso:RSc2047 hypothetical protein; NUDIX hydrolase complement(2308836..2309447) Ralstonia pickettii 12J 6288883 YP_001899766.1 CDS Rpic_2200 NC_010682.1 2309492 2309806 R KEGG: rso:RSc2048 probable transmembrane protein; hypothetical protein complement(2309492..2309806) Ralstonia pickettii 12J 6287464 YP_001899767.1 CDS Rpic_2201 NC_010682.1 2309820 2311295 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(2309820..2311295) Ralstonia pickettii 12J 6287465 YP_001899768.1 CDS Rpic_2202 NC_010682.1 2311312 2312778 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M complement(2311312..2312778) Ralstonia pickettii 12J 6287466 YP_001899769.1 CDS Rpic_2203 NC_010682.1 2312791 2314851 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(2312791..2314851) Ralstonia pickettii 12J 6287467 YP_001899770.1 CDS Rpic_2204 NC_010682.1 2314881 2315192 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K complement(2314881..2315192) Ralstonia pickettii 12J 6288401 YP_001899771.1 CDS Rpic_2205 NC_010682.1 2315210 2315842 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J complement(2315210..2315842) Ralstonia pickettii 12J 6288402 YP_001899772.1 CDS Rpic_2206 NC_010682.1 2315989 2316480 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(2315989..2316480) Ralstonia pickettii 12J 6288403 YP_001899773.1 CDS Rpic_2207 NC_010682.1 2316501 2317565 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(2316501..2317565) Ralstonia pickettii 12J 6288404 YP_001899774.1 CDS Rpic_2208 NC_010682.1 2317574 2319925 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G complement(2317574..2319925) Ralstonia pickettii 12J 6287189 YP_001899775.1 CDS Rpic_2209 NC_010682.1 2319938 2321233 R KEGG: rso:RSc2057 probable NADH dehydrogenase I (chain F) oxidoreductase protein; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F complement(2319938..2321233) Ralstonia pickettii 12J 6287190 YP_001899776.1 CDS Rpic_2210 NC_010682.1 2321234 2321737 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E complement(2321234..2321737) Ralstonia pickettii 12J 6287191 YP_001899777.1 CDS Rpic_2211 NC_010682.1 2321853 2323106 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D complement(2321853..2323106) Ralstonia pickettii 12J 6287192 YP_001899778.1 CDS Rpic_2212 NC_010682.1 2323120 2323722 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C complement(2323120..2323722) Ralstonia pickettii 12J 6287760 YP_001899779.1 CDS Rpic_2213 NC_010682.1 2323724 2324206 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(2323724..2324206) Ralstonia pickettii 12J 6287761 YP_001899780.1 CDS Rpic_2214 NC_010682.1 2324213 2324572 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A complement(2324213..2324572) Ralstonia pickettii 12J 6287762 YP_001899781.1 CDS secG NC_010682.1 2325000 2325362 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: rso:RSc2063 preprotein translocase subunit SecG; preprotein translocase subunit SecG complement(2325000..2325362) Ralstonia pickettii 12J 6289136 YP_001899782.1 CDS tpiA NC_010682.1 2325425 2326171 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(2325425..2326171) Ralstonia pickettii 12J 6289137 YP_001899783.1 CDS Rpic_2217 NC_010682.1 2326251 2327255 R TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc2065 putative NADPH quinone oxidoreductase oxidoreductase protein; NAD(P)H quinone oxidoreductase complement(2326251..2327255) Ralstonia pickettii 12J 6289138 YP_001899784.1 CDS Rpic_2218 NC_010682.1 2327294 2328247 R KEGG: rso:RSc2066 hypothetical protein; hypothetical protein complement(2327294..2328247) Ralstonia pickettii 12J 6289108 YP_001899785.1 CDS Rpic_2219 NC_010682.1 2328348 2330522 R KEGG: rso:RSc2067 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase complement(2328348..2330522) Ralstonia pickettii 12J 6289109 YP_001899786.1 CDS rpsO NC_010682.1 2330841 2331110 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(2330841..2331110) Ralstonia pickettii 12J 6289110 YP_001899787.1 CDS Rpic_2221 NC_010682.1 2331269 2332528 R KEGG: rso:RSc2070 probable transporter signal peptide protein; putative transporter signal peptide protein complement(2331269..2332528) Ralstonia pickettii 12J 6289111 YP_001899788.1 CDS Rpic_2222 NC_010682.1 2332712 2333164 D KEGG: rso:RSc2071 probable transmembrane protein; hypothetical protein 2332712..2333164 Ralstonia pickettii 12J 6288397 YP_001899789.1 CDS Rpic_2223 NC_010682.1 2333409 2334950 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(2333409..2334950) Ralstonia pickettii 12J 6288398 YP_001899790.1 CDS Rpic_2224 NC_010682.1 2335267 2336139 R KEGG: rso:RSc2073 putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(2335267..2336139) Ralstonia pickettii 12J 6288399 YP_001899791.1 CDS Rpic_2225 NC_010682.1 2336153 2336800 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(2336153..2336800) Ralstonia pickettii 12J 6288400 YP_001899792.1 CDS Rpic_2226 NC_010682.1 2336947 2337963 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2336947..2337963) Ralstonia pickettii 12J 6286215 YP_001899793.1 CDS ilvH NC_010682.1 2338039 2338530 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(2338039..2338530) Ralstonia pickettii 12J 6286216 YP_001899794.1 CDS Rpic_2228 NC_010682.1 2338530 2340287 R acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit complement(2338530..2340287) Ralstonia pickettii 12J 6286217 YP_001899795.1 CDS Rpic_2229 NC_010682.1 2340647 2341213 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 2340647..2341213 Ralstonia pickettii 12J 6286218 YP_001899796.1 CDS Rpic_2230 NC_010682.1 2341210 2341650 D KEGG: rso:RSc2079 probable transmembrane protein; hypothetical protein 2341210..2341650 Ralstonia pickettii 12J 6288043 YP_001899797.1 CDS Rpic_2231 NC_010682.1 2341662 2342516 D KEGG: rso:RSc2080 probable transmembrane protein; hypothetical protein 2341662..2342516 Ralstonia pickettii 12J 6288044 YP_001899798.1 CDS Rpic_2232 NC_010682.1 2342613 2343137 D PFAM: RDD domain containing protein; KEGG: rso:RSc2081 probable transmembrane protein; RDD domain-containing protein 2342613..2343137 Ralstonia pickettii 12J 6288045 YP_001899799.1 CDS Rpic_2233 NC_010682.1 2343168 2344184 D PFAM: PGAP1 family protein; KEGG: rso:RSc2082 putative lipase transmembrane protein; PGAP1 family protein 2343168..2344184 Ralstonia pickettii 12J 6288046 YP_001899800.1 CDS Rpic_2234 NC_010682.1 2344428 2345378 D PFAM: metallophosphoesterase; KEGG: rso:RSc2083 hypothetical protein; metallophosphoesterase 2344428..2345378 Ralstonia pickettii 12J 6286494 YP_001899801.1 CDS Rpic_2235 NC_010682.1 2345456 2346508 D PFAM: glycosyl transferase group 1; KEGG: rso:RSc2084 hypothetical protein; group1 glycosyl transferase 2345456..2346508 Ralstonia pickettii 12J 6286495 YP_001899802.1 CDS Rpic_2236 NC_010682.1 2346521 2346985 D PFAM: diacylglycerol kinase; KEGG: rso:RSc2085 probable diacylglycerol kinase transmembrane protein; diacylglycerol kinase 2346521..2346985 Ralstonia pickettii 12J 6286496 YP_001899803.1 CDS Rpic_2237 NC_010682.1 2347123 2347833 D PFAM: regulatory protein TetR; KEGG: rso:RSc2086 putative transcription regulator protein; TetR family transcriptional regulator 2347123..2347833 Ralstonia pickettii 12J 6286497 YP_001899804.1 CDS Rpic_2238 NC_010682.1 2347830 2348414 D PFAM: conserved hypothetical protein; KEGG: rso:RSc2087 hypothetical protein; hypothetical protein 2347830..2348414 Ralstonia pickettii 12J 6289814 YP_001899805.1 CDS Rpic_2239 NC_010682.1 2348421 2349017 D KEGG: rso:RSc2088 probable transmembrane protein; hypothetical protein 2348421..2349017 Ralstonia pickettii 12J 6289815 YP_001899806.1 CDS Rpic_2240 NC_010682.1 2349038 2349616 R PFAM: protein of unknown function DUF924; KEGG: rso:RSc2089 putative transmembrane protein; hypothetical protein complement(2349038..2349616) Ralstonia pickettii 12J 6289816 YP_001899807.1 CDS Rpic_2241 NC_010682.1 2349666 2350070 R PFAM: globin; KEGG: rso:RSc2090 putative oxygen-binding protein (globin); globin complement(2349666..2350070) Ralstonia pickettii 12J 6289817 YP_001899808.1 CDS Rpic_2242 NC_010682.1 2350107 2352641 R PFAM: protein of unknown function DUF214; KEGG: rso:RSc2091 probable transmembrane protein; hypothetical protein complement(2350107..2352641) Ralstonia pickettii 12J 6288782 YP_001899809.1 CDS Rpic_2243 NC_010682.1 2352698 2353798 R PFAM: regulatory protein LysR; KEGG: rso:RSc2092 hypothetical protein; transcriptional regulator of molybdate metabolism, LysR family complement(2352698..2353798) Ralstonia pickettii 12J 6288783 YP_001899810.1 CDS Rpic_2244 NC_010682.1 2353957 2354805 D PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc2093 probable signal peptide protein; family 1 extracellular solute-binding protein 2353957..2354805 Ralstonia pickettii 12J 6288784 YP_001899811.1 CDS Rpic_2245 NC_010682.1 2354850 2355797 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2094 probable transcription regulator protein; LysR family transcriptional regulator complement(2354850..2355797) Ralstonia pickettii 12J 6288785 YP_001899812.1 CDS Rpic_2246 NC_010682.1 2356011 2357525 D TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: rso:RSc2095 putative xanthine dehydrogenase (subunit A) oxidoreductase protein; xanthine dehydrogenase small subunit 2356011..2357525 Ralstonia pickettii 12J 6287740 YP_001899813.1 CDS Rpic_2247 NC_010682.1 2357530 2359896 D KEGG: rso:RSc2096 probable xanthine dehydrogenase (subunit B) oxidoreductase protein; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; xanthine dehydrogenase, molybdopterin binding subunit 2357530..2359896 Ralstonia pickettii 12J 6287741 YP_001899814.1 CDS Rpic_2248 NC_010682.1 2359913 2360947 D TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: rso:RSc2097 probable xanthine dehydrogenase protein; xanthine dehydrogenase accessory protein XdhC 2359913..2360947 Ralstonia pickettii 12J 6287742 YP_001899815.1 CDS Rpic_2249 NC_010682.1 2360950 2361987 D catalyzes the formation of inosine from adenosine; adenosine deaminase 2360950..2361987 Ralstonia pickettii 12J 6287743 YP_001899816.1 CDS Rpic_2250 NC_010682.1 2362004 2363338 D Catalyzes the deamination of guanine; guanine deaminase 2362004..2363338 Ralstonia pickettii 12J 6287444 YP_001899817.1 CDS Rpic_2251 NC_010682.1 2363576 2364148 D PFAM: protein of unknown function UPF0016; KEGG: rso:RSc2100 probable transmembrane protein; hypothetical protein 2363576..2364148 Ralstonia pickettii 12J 6287445 YP_001899818.1 CDS Rpic_2252 NC_010682.1 2364192 2365787 R KEGG: reh:H16_A0659 hypothetical protein; hypothetical protein complement(2364192..2365787) Ralstonia pickettii 12J 6287446 YP_001899819.1 CDS Rpic_2253 NC_010682.1 2365798 2368122 R KEGG: reh:H16_A0657 hypothetical protein; hypothetical protein complement(2365798..2368122) Ralstonia pickettii 12J 6287447 YP_001899820.1 CDS Rpic_2254 NC_010682.1 2368153 2370741 R TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: reh:H16_A0656 hypothetical protein; ImpA family type VI secretion-associated protein complement(2368153..2370741) Ralstonia pickettii 12J 6289745 YP_001899821.1 CDS Rpic_2255 NC_010682.1 2371676 2372932 R PFAM: protein of unknown function DUF989; KEGG: rso:RSc2115 probable transmembrane protein; hypothetical protein complement(2371676..2372932) Ralstonia pickettii 12J 6289746 YP_001899822.1 CDS Rpic_2256 NC_010682.1 2372950 2373303 R TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: rso:RSc2116 putative transthyretin-like protein precursor; hydroxyisourate hydrolase complement(2372950..2373303) Ralstonia pickettii 12J 6289747 YP_001899823.1 CDS Rpic_2257 NC_010682.1 2373681 2374439 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rso:RSc2117 probable transcription regulator protein; GntR family transcriptional regulator 2373681..2374439 Ralstonia pickettii 12J 6289748 YP_001899824.1 CDS Rpic_2258 NC_010682.1 2374656 2376065 D TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: rso:RSc2118 putative xanthine permease transmembrane protein; xanthine permease 2374656..2376065 Ralstonia pickettii 12J 6289355 YP_001899825.1 CDS Rpic_2259 NC_010682.1 2376070 2377488 D catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 2376070..2377488 Ralstonia pickettii 12J 6289356 YP_001899826.1 CDS Rpic_2260 NC_010682.1 2377600 2378562 D KEGG: rso:RSc2120 hypothetical protein; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein 2377600..2378562 Ralstonia pickettii 12J 6289357 YP_001899827.1 CDS Rpic_2261 NC_010682.1 2378559 2379083 D KEGG: rso:RSc2121 hypothetical protein; hypothetical protein 2378559..2379083 Ralstonia pickettii 12J 6289358 YP_001899828.1 CDS Rpic_2262 NC_010682.1 2379236 2380306 D PFAM: porin Gram-negative type; KEGG: rso:RS00714 probable porin precursor transmembrane protein; porin 2379236..2380306 Ralstonia pickettii 12J 6289254 YP_001899829.1 CDS Rpic_2263 NC_010682.1 2380405 2382726 R NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme complement(2380405..2382726) Ralstonia pickettii 12J 6289255 YP_001899830.1 CDS Rpic_2264 NC_010682.1 2383022 2383690 R KEGG: rso:RSc2124 probable lipoprotein transmembrane; putative transmembrane lipoprotein complement(2383022..2383690) Ralstonia pickettii 12J 6289256 YP_001899831.1 CDS pepN NC_010682.1 2383843 2386545 D TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: rso:RSc2125 probable aminopeptidase N (alpha-aminoacylpeptide hydrolase) metalloprotease protein; aminopeptidase N 2383843..2386545 Ralstonia pickettii 12J 6289257 YP_001899832.1 CDS Rpic_2266 NC_010682.1 2386592 2387608 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 2386592..2387608 Ralstonia pickettii 12J 6287673 YP_001899833.1 CDS Rpic_2267 NC_010682.1 2387830 2388315 R PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: rso:RSc2148 hypothetical protein; LysM domain/BON superfamily protein complement(2387830..2388315) Ralstonia pickettii 12J 6287675 YP_001899834.1 CDS Rpic_2268 NC_010682.1 2388618 2389652 D TIGRFAM: esterase, PHB depolymerase family; KEGG: rso:RSc2149 hypothetical protein; esterase, PHB depolymerase family 2388618..2389652 Ralstonia pickettii 12J 6287209 YP_001899835.1 CDS Rpic_2269 NC_010682.1 2389660 2389965 R KEGG: rso:RSc2150 hypothetical protein; hypothetical protein complement(2389660..2389965) Ralstonia pickettii 12J 6287210 YP_001899836.1 CDS Rpic_2270 NC_010682.1 2390070 2390507 R KEGG: rso:RSc2151 probable signal peptide protein; putative signal peptide protein complement(2390070..2390507) Ralstonia pickettii 12J 6287211 YP_001899837.1 CDS Rpic_2271 NC_010682.1 2390582 2391517 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_5325 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2390582..2391517) Ralstonia pickettii 12J 6287212 YP_001899838.1 CDS Rpic_2272 NC_010682.1 2391666 2392499 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: mms:mma_0404 transporter of the DMT superfamily; hypothetical protein 2391666..2392499 Ralstonia pickettii 12J 6289065 YP_001899839.1 CDS greB NC_010682.1 2392509 2393072 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(2392509..2393072) Ralstonia pickettii 12J 6289066 YP_001899840.1 CDS Rpic_2274 NC_010682.1 2393424 2395844 R KEGG: rso:RSc2153 probable bifunctional enzyme : (P)ppGpp synthetase II and guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase (ppGppase) protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA complement(2393424..2395844) Ralstonia pickettii 12J 6289068 YP_001899841.1 CDS Rpic_2275 NC_010682.1 2396110 2396313 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(2396110..2396313) Ralstonia pickettii 12J 6287405 YP_001899842.1 CDS gmk NC_010682.1 2396450 2397115 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(2396450..2397115) Ralstonia pickettii 12J 6287406 YP_001899843.1 CDS Rpic_2277 NC_010682.1 2397138 2398073 R PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: rso:RSc2156 hypothetical protein; hypothetical protein complement(2397138..2398073) Ralstonia pickettii 12J 6287407 YP_001899844.1 CDS Rpic_2278 NC_010682.1 2398225 2399250 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rso:RSc2157 probable protein kinase; serine/threonine protein kinase 2398225..2399250 Ralstonia pickettii 12J 6287153 YP_001899845.1 CDS Rpic_2279 NC_010682.1 2399356 2400270 D PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rso:RSc2158 hypothetical protein; protein serine/threonine phosphatase 2399356..2400270 Ralstonia pickettii 12J 6287154 YP_001899846.1 CDS rph NC_010682.1 2400367 2401083 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 2400367..2401083 Ralstonia pickettii 12J 6287155 YP_001899847.1 CDS Rpic_2281 NC_010682.1 2401095 2401700 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 2401095..2401700 Ralstonia pickettii 12J 6287156 YP_001899848.1 CDS Rpic_2282 NC_010682.1 2401708 2402976 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2401708..2402976 Ralstonia pickettii 12J 6288802 YP_001899849.1 CDS Rpic_2283 NC_010682.1 2403290 2404543 D PFAM: integrase family protein; KEGG: rso:RSc1896 putative integrase prophage protein; integrase family protein 2403290..2404543 Ralstonia pickettii 12J 6288804 YP_001899850.1 CDS Rpic_2284 NC_010682.1 2404801 2405391 R KEGG: bvi:Bcep1808_1189 hypothetical protein; hypothetical protein complement(2404801..2405391) Ralstonia pickettii 12J 6288170 YP_001899851.1 CDS Rpic_2285 NC_010682.1 2405391 2405873 R PFAM: protein of unknown function DUF847; KEGG: bvi:Bcep1808_1188 protein of unknown function DUF847; hypothetical protein complement(2405391..2405873) Ralstonia pickettii 12J 6288171 YP_001899852.1 CDS Rpic_2286 NC_010682.1 2406175 2408118 R KEGG: bam:Bamb_2412 hypothetical protein; hypothetical protein complement(2406175..2408118) Ralstonia pickettii 12J 6288172 YP_001899853.1 CDS Rpic_2287 NC_010682.1 2408197 2408574 D PFAM: heat shock protein DnaJ domain protein; KEGG: tbd:Tbd_1999 heat shock protein DnaJ; heat shock protein DnaJ domain-containing protein 2408197..2408574 Ralstonia pickettii 12J 6288173 YP_001899854.1 CDS Rpic_2288 NC_010682.1 2408564 2411227 R PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: bpd:BURPS668_0274 flagellar rod assembly protein/muramidase FlgJ; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase complement(2408564..2411227) Ralstonia pickettii 12J 6287692 YP_001899855.1 CDS Rpic_2289 NC_010682.1 2411224 2412612 R KEGG: bvi:Bcep1808_1183 hypothetical protein; hypothetical protein complement(2411224..2412612) Ralstonia pickettii 12J 6287693 YP_001899856.1 CDS Rpic_2290 NC_010682.1 2412618 2413703 R KEGG: bvi:Bcep1808_1182 DNA transfer protein; hypothetical protein complement(2412618..2413703) Ralstonia pickettii 12J 6287694 YP_001899857.1 CDS Rpic_2291 NC_010682.1 2413705 2414166 R KEGG: bvi:Bcep1808_1181 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2413705..2414166) Ralstonia pickettii 12J 6287695 YP_001899858.1 CDS Rpic_2292 NC_010682.1 2414163 2414729 R PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: bvi:Bcep1808_1180 aspartyl/asparaginyl beta-hydroxylase; aspartyl/asparaginyl beta-hydroxylase complement(2414163..2414729) Ralstonia pickettii 12J 6286889 YP_001899859.1 CDS Rpic_2293 NC_010682.1 2415021 2415353 R KEGG: gdi:GDI3683 hypothetical protein; hypothetical protein complement(2415021..2415353) Ralstonia pickettii 12J 6286890 YP_001899860.1 CDS Rpic_2294 NC_010682.1 2415350 2415748 R hypothetical protein complement(2415350..2415748) Ralstonia pickettii 12J 6286891 YP_001899861.1 CDS Rpic_2295 NC_010682.1 2415748 2417184 R KEGG: bvi:Bcep1808_1176 hypothetical protein; hypothetical protein complement(2415748..2417184) Ralstonia pickettii 12J 6286892 YP_001899862.1 CDS Rpic_2296 NC_010682.1 2417181 2417897 R KEGG: bvi:Bcep1808_1175 hypothetical protein; hypothetical protein complement(2417181..2417897) Ralstonia pickettii 12J 6289596 YP_001899863.1 CDS Rpic_2297 NC_010682.1 2417901 2418245 R KEGG: mgr:MGG_06033 hypothetical protein; hypothetical protein complement(2417901..2418245) Ralstonia pickettii 12J 6289597 YP_001899864.1 CDS Rpic_2298 NC_010682.1 2418254 2418511 R hypothetical protein complement(2418254..2418511) Ralstonia pickettii 12J 6289598 YP_001899865.1 CDS Rpic_2299 NC_010682.1 2418508 2418834 R KEGG: bvi:Bcep1808_1174 hypothetical protein; hypothetical protein complement(2418508..2418834) Ralstonia pickettii 12J 6289599 YP_001899866.1 CDS Rpic_2300 NC_010682.1 2418896 2420161 R KEGG: bvi:Bcep1808_1173 hypothetical protein; hypothetical protein complement(2418896..2420161) Ralstonia pickettii 12J 6288731 YP_001899867.1 CDS Rpic_2301 NC_010682.1 2420167 2421000 R KEGG: bvi:Bcep1808_1172 hypothetical protein; hypothetical protein complement(2420167..2421000) Ralstonia pickettii 12J 6288732 YP_001899868.1 CDS Rpic_2302 NC_010682.1 2421130 2422437 R KEGG: olu:OSTLU_28282 predicted protein; hypothetical protein complement(2421130..2422437) Ralstonia pickettii 12J 6288733 YP_001899869.1 CDS Rpic_2303 NC_010682.1 2422509 2424638 R KEGG: bvi:Bcep1808_1171 hypothetical protein; hypothetical protein complement(2422509..2424638) Ralstonia pickettii 12J 6288734 YP_001899870.1 CDS Rpic_2304 NC_010682.1 2424638 2424799 R hypothetical protein complement(2424638..2424799) Ralstonia pickettii 12J 6286277 YP_001899871.1 CDS Rpic_2305 NC_010682.1 2424802 2426277 R KEGG: dvu:DVU1724 phage uncharacterized protein, putative; phage protein complement(2424802..2426277) Ralstonia pickettii 12J 6286278 YP_001899872.1 CDS Rpic_2306 NC_010682.1 2426246 2426689 R KEGG: pnu:Pnuc_1129 hypothetical protein; hypothetical protein complement(2426246..2426689) Ralstonia pickettii 12J 6286279 YP_001899873.1 CDS Rpic_2307 NC_010682.1 2426872 2427324 R KEGG: aba:Acid345_4368 hypothetical protein; hypothetical protein complement(2426872..2427324) Ralstonia pickettii 12J 6286280 YP_001899874.1 CDS Rpic_2308 NC_010682.1 2427385 2428008 R KEGG: bxe:Bxe_A3055 hypothetical protein; hypothetical protein complement(2427385..2428008) Ralstonia pickettii 12J 6289624 YP_001899875.1 CDS Rpic_2309 NC_010682.1 2428008 2428280 R KEGG: gdi:GDI1281 hypothetical protein; hypothetical protein complement(2428008..2428280) Ralstonia pickettii 12J 6289625 YP_001899876.1 CDS Rpic_2310 NC_010682.1 2428280 2428459 R hypothetical protein complement(2428280..2428459) Ralstonia pickettii 12J 6289626 YP_001899877.1 CDS Rpic_2311 NC_010682.1 2428493 2428783 R hypothetical protein complement(2428493..2428783) Ralstonia pickettii 12J 6289627 YP_001899878.1 CDS Rpic_2312 NC_010682.1 2429112 2429525 R hypothetical protein complement(2429112..2429525) Ralstonia pickettii 12J 6288938 YP_001899879.1 CDS Rpic_2313 NC_010682.1 2429526 2429726 R hypothetical protein complement(2429526..2429726) Ralstonia pickettii 12J 6288006 YP_001899880.1 CDS Rpic_2314 NC_010682.1 2429723 2429995 R hypothetical protein complement(2429723..2429995) Ralstonia pickettii 12J 6288007 YP_001899881.1 CDS Rpic_2315 NC_010682.1 2429992 2430789 R hypothetical protein complement(2429992..2430789) Ralstonia pickettii 12J 6288008 YP_001899882.1 CDS Rpic_2316 NC_010682.1 2430786 2431073 R KEGG: cko:CKO_01885 hypothetical protein; hypothetical protein complement(2430786..2431073) Ralstonia pickettii 12J 6287856 YP_001899883.1 CDS Rpic_2317 NC_010682.1 2431070 2431495 R KEGG: bvi:Bcep1808_1164 hypothetical protein; hypothetical protein complement(2431070..2431495) Ralstonia pickettii 12J 6287857 YP_001899884.1 CDS Rpic_2318 NC_010682.1 2431492 2431803 R hypothetical protein complement(2431492..2431803) Ralstonia pickettii 12J 6287858 YP_001899885.1 CDS Rpic_2319 NC_010682.1 2431809 2432168 R hypothetical protein complement(2431809..2432168) Ralstonia pickettii 12J 6287859 YP_001899886.1 CDS Rpic_2320 NC_010682.1 2432165 2432473 R hypothetical protein complement(2432165..2432473) Ralstonia pickettii 12J 6288279 YP_001899887.1 CDS Rpic_2321 NC_010682.1 2432550 2432882 R hypothetical protein complement(2432550..2432882) Ralstonia pickettii 12J 6288280 YP_001899888.1 CDS Rpic_2322 NC_010682.1 2432870 2433070 R hypothetical protein complement(2432870..2433070) Ralstonia pickettii 12J 6288281 YP_001899889.1 CDS Rpic_2323 NC_010682.1 2433080 2433661 R KEGG: hau:Haur_0323 hypothetical protein; hypothetical protein complement(2433080..2433661) Ralstonia pickettii 12J 6288282 YP_001899890.1 CDS Rpic_2324 NC_010682.1 2433685 2434161 R PFAM: endodeoxyribonuclease RusA; KEGG: ngo:NGO0489 hypothetical protein, putative phage associated protein; endodeoxyribonuclease RusA complement(2433685..2434161) Ralstonia pickettii 12J 6289401 YP_001899891.1 CDS Rpic_2325 NC_010682.1 2434169 2435563 R PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_1163 DnaB domain protein helicase, C-terminal domain protein; DnaB domain-containing protein helicase domain-containing protein complement(2434169..2435563) Ralstonia pickettii 12J 6289402 YP_001899892.1 CDS Rpic_2326 NC_010682.1 2435560 2436465 R KEGG: tbd:Tbd_2069 hypothetical protein; hypothetical protein complement(2435560..2436465) Ralstonia pickettii 12J 6289403 YP_001899893.1 CDS Rpic_2327 NC_010682.1 2436465 2436626 R hypothetical protein complement(2436465..2436626) Ralstonia pickettii 12J 6289404 YP_001899894.1 CDS Rpic_2328 NC_010682.1 2436623 2436799 R hypothetical protein complement(2436623..2436799) Ralstonia pickettii 12J 6288723 YP_001899895.1 CDS Rpic_2329 NC_010682.1 2436796 2437200 R hypothetical protein complement(2436796..2437200) Ralstonia pickettii 12J 6288724 YP_001899896.1 CDS Rpic_2330 NC_010682.1 2437459 2438367 D PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: bpt:Bpet0963 putative transcriptional regulator; putative phage repressor 2437459..2438367 Ralstonia pickettii 12J 6288725 YP_001899897.1 CDS Rpic_2331 NC_010682.1 2438375 2438656 D hypothetical protein 2438375..2438656 Ralstonia pickettii 12J 6288726 YP_001899898.1 CDS Rpic_2332 NC_010682.1 2438665 2438955 D KEGG: bpt:Bpet2040 hypothetical protein; hypothetical protein 2438665..2438955 Ralstonia pickettii 12J 6286336 YP_001899899.1 CDS Rpic_2333 NC_010682.1 2439140 2439388 D hypothetical protein 2439140..2439388 Ralstonia pickettii 12J 6286337 YP_001899900.1 CDS Rpic_2334 NC_010682.1 2439401 2439724 D hypothetical protein 2439401..2439724 Ralstonia pickettii 12J 6286338 YP_001899901.1 CDS Rpic_2335 NC_010682.1 2439735 2439968 D hypothetical protein 2439735..2439968 Ralstonia pickettii 12J 6286339 YP_001899902.1 CDS Rpic_2336 NC_010682.1 2440096 2440479 D KEGG: mag:amb1496 hypothetical protein; hypothetical protein 2440096..2440479 Ralstonia pickettii 12J 6286789 YP_001899903.1 CDS Rpic_2337 NC_010682.1 2440847 2442232 D KEGG: bra:BRADO3712 conserved hypothetical protein; putative ribonucleoprotein-related protein; hypothetical protein 2440847..2442232 Ralstonia pickettii 12J 6286790 YP_001899904.1 CDS Rpic_2338 NC_010682.1 2442234 2442560 D hypothetical protein 2442234..2442560 Ralstonia pickettii 12J 6286791 YP_001899905.1 CDS Rpic_2339 NC_010682.1 2442562 2443047 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mgi:Mflv_3897 HNH endonuclease; HNH endonuclease 2442562..2443047 Ralstonia pickettii 12J 6286792 YP_001899906.1 CDS Rpic_2340 NC_010682.1 2443050 2443427 D KEGG: bxe:Bxe_A3103 hypothetical protein; hypothetical protein 2443050..2443427 Ralstonia pickettii 12J 6289397 YP_001899907.1 CDS Rpic_2341 NC_010682.1 2443444 2443689 D hypothetical protein 2443444..2443689 Ralstonia pickettii 12J 6289398 YP_001899908.1 CDS Rpic_2342 NC_010682.1 2443689 2443874 D hypothetical protein 2443689..2443874 Ralstonia pickettii 12J 6289399 YP_001899909.1 CDS Rpic_2343 NC_010682.1 2443901 2444179 D KEGG: bpd:BURPS668_A2376 hypothetical protein; hypothetical protein 2443901..2444179 Ralstonia pickettii 12J 6289400 YP_001899910.1 CDS Rpic_2344 NC_010682.1 2444176 2445006 D PFAM: ERF family protein; KEGG: dac:Daci_3205 ERF family protein; ERF family protein 2444176..2445006 Ralstonia pickettii 12J 6289531 YP_001899911.1 CDS Rpic_2345 NC_010682.1 2445037 2446668 D KEGG: psb:Psyr_2821 hypothetical protein; hypothetical protein 2445037..2446668 Ralstonia pickettii 12J 6289532 YP_001899912.1 CDS Rpic_2346 NC_010682.1 2446723 2447226 D KEGG: bpe:BP0507 hypothetical protein; hypothetical protein 2446723..2447226 Ralstonia pickettii 12J 6289533 YP_001899913.1 CDS Rpic_2347 NC_010682.1 2447357 2447965 D KEGG: mag:amb1496 hypothetical protein; hypothetical protein 2447357..2447965 Ralstonia pickettii 12J 6289534 YP_001899914.1 CDS Rpic_2348 NC_010682.1 2448019 2448609 D KEGG: pst:PSPTO_3942 hypothetical protein; hypothetical protein 2448019..2448609 Ralstonia pickettii 12J 6289475 YP_001899915.1 CDS Rpic_2349 NC_010682.1 2448619 2448990 D KEGG: mag:amb0459 hypothetical protein; hypothetical protein 2448619..2448990 Ralstonia pickettii 12J 6289476 YP_001899916.1 CDS Rpic_2350 NC_010682.1 2449191 2450372 D KEGG: mag:amb0460 Retron-type reverse transcriptase; Retron-type reverse transcriptase 2449191..2450372 Ralstonia pickettii 12J 6289477 YP_001899917.1 CDS Rpic_2351 NC_010682.1 2450369 2450743 D hypothetical protein 2450369..2450743 Ralstonia pickettii 12J 6289478 YP_001899918.1 CDS Rpic_2352 NC_010682.1 2450740 2452419 D PFAM: C-5 cytosine-specific DNA methylase; KEGG: reu:Reut_A2369 C-5 cytosine-specific DNA methylase; C-5 cytosine-specific DNA methylase 2450740..2452419 Ralstonia pickettii 12J 6288857 YP_001899919.1 CDS Rpic_2353 NC_010682.1 2452416 2454980 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: pde:Pden_0341 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 2452416..2454980 Ralstonia pickettii 12J 6288858 YP_001899920.1 CDS Rpic_2354 NC_010682.1 2454977 2455327 D KEGG: bur:Bcep18194_B1030 hypothetical protein; hypothetical protein 2454977..2455327 Ralstonia pickettii 12J 6288859 YP_001899921.1 CDS Rpic_2355 NC_010682.1 2455324 2455548 D hypothetical protein 2455324..2455548 Ralstonia pickettii 12J 6288860 YP_001899922.1 CDS Rpic_2356 NC_010682.1 2455749 2455997 D hypothetical protein 2455749..2455997 Ralstonia pickettii 12J 6289292 YP_001899923.1 CDS Rpic_2357 NC_010682.1 2455987 2456547 D hypothetical protein 2455987..2456547 Ralstonia pickettii 12J 6289293 YP_001899924.1 CDS Rpic_2358 NC_010682.1 2456768 2457157 D hypothetical protein 2456768..2457157 Ralstonia pickettii 12J 6289294 YP_001899925.1 CDS Rpic_2359 NC_010682.1 2457154 2457384 D hypothetical protein 2457154..2457384 Ralstonia pickettii 12J 6289295 YP_001899926.1 CDS Rpic_2360 NC_010682.1 2457389 2457637 D hypothetical protein 2457389..2457637 Ralstonia pickettii 12J 6286633 YP_001899927.1 CDS Rpic_2361 NC_010682.1 2457630 2457869 D hypothetical protein 2457630..2457869 Ralstonia pickettii 12J 6286634 YP_001899928.1 CDS Rpic_2362 NC_010682.1 2457924 2458154 D PFAM: Prophage CP4-57 regulatory; KEGG: bpd:BURPS668_A2390 prophage CP4-57 regulatory protein (AlpA); phage transcriptional regulator AlpA 2457924..2458154 Ralstonia pickettii 12J 6286635 YP_001899929.1 CDS Rpic_2363 NC_010682.1 2458665 2458802 D hypothetical protein 2458665..2458802 Ralstonia pickettii 12J 6286636 YP_001899930.1 CDS Rpic_2364 NC_010682.1 2459456 2460040 D KEGG: reh:H16_B0962 ligand binding (PAS) regulator with LuxR-type HTH-motif; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; LuxR family transcriptional regulator 2459456..2460040 Ralstonia pickettii 12J 6287800 YP_001899931.1 CDS Rpic_2365 NC_010682.1 2460355 2460762 D hypothetical protein 2460355..2460762 Ralstonia pickettii 12J 6287801 YP_001899932.1 CDS Rpic_2366 NC_010682.1 2460798 2461430 D KEGG: rso:RSc2164 probable signal peptide protein; putative signal peptide protein 2460798..2461430 Ralstonia pickettii 12J 6287802 YP_001899933.1 CDS Rpic_2367 NC_010682.1 2461818 2462351 D KEGG: cvi:CV_1820 probable ribonuclease E; hypothetical protein 2461818..2462351 Ralstonia pickettii 12J 6287803 YP_001899934.1 CDS Rpic_2368 NC_010682.1 2462377 2463024 R catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase complement(2462377..2463024) Ralstonia pickettii 12J 6286518 YP_001899935.1 CDS Rpic_2369 NC_010682.1 2463103 2464098 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rso:RSc2166 putative signal peptide protein; TRAP dicarboxylate transporter subunit DctP complement(2463103..2464098) Ralstonia pickettii 12J 6286519 YP_001899936.1 CDS Rpic_2370 NC_010682.1 2464270 2465226 R PFAM: protein of unknown function DUF979; KEGG: rso:RSc2167 probable transmembrane protein; hypothetical protein complement(2464270..2465226) Ralstonia pickettii 12J 6286520 YP_001899937.1 CDS Rpic_2371 NC_010682.1 2465230 2465967 R PFAM: protein of unknown function DUF969; KEGG: rso:RSc2168 probable transmembrane protein; hypothetical protein complement(2465230..2465967) Ralstonia pickettii 12J 6286521 YP_001899938.1 CDS Rpic_2372 NC_010682.1 2466023 2466766 R PFAM: LamB/YcsF family protein; KEGG: rso:RSc2169 hypothetical protein; LamB/YcsF family protein complement(2466023..2466766) Ralstonia pickettii 12J 6286328 YP_001899939.1 CDS Rpic_2373 NC_010682.1 2466786 2467835 R KEGG: rso:RSc2170 hypothetical protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; urea amidolyase-like protein complement(2466786..2467835) Ralstonia pickettii 12J 6286329 YP_001899940.1 CDS Rpic_2374 NC_010682.1 2467832 2468479 R PFAM: Allophanate hydrolase subunit 1; KEGG: rso:RSc2171 hypothetical protein; allophanate hydrolase subunit 1 complement(2467832..2468479) Ralstonia pickettii 12J 6286330 YP_001899941.1 CDS Rpic_2375 NC_010682.1 2468755 2469939 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2172 probable drug transport transmembrane protein; Bcr/CflA subfamily drug resistance transporter complement(2468755..2469939) Ralstonia pickettii 12J 6286331 YP_001899942.1 CDS Rpic_2376 NC_010682.1 2470457 2471971 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2173 probable sugar ATP binding ABC transporter protein; ABC transporter-like protein 2470457..2471971 Ralstonia pickettii 12J 6288978 YP_001899943.1 CDS Rpic_2377 NC_010682.1 2471964 2473073 D PFAM: inner-membrane translocator; KEGG: rso:RSc2174 probable transmembrane ABC transporter protein; inner-membrane translocator 2471964..2473073 Ralstonia pickettii 12J 6288979 YP_001899944.1 CDS Rpic_2378 NC_010682.1 2473087 2474007 D PFAM: inner-membrane translocator; KEGG: rso:RSc2175 probable transmembrane ABC transporter protein; inner-membrane translocator 2473087..2474007 Ralstonia pickettii 12J 6288980 YP_001899945.1 CDS Rpic_2379 NC_010682.1 2474087 2475244 D PFAM: basic membrane lipoprotein; KEGG: rso:RSc2177 probable lipoprotein; basic membrane lipoprotein 2474087..2475244 Ralstonia pickettii 12J 6288981 YP_001899946.1 CDS Rpic_2380 NC_010682.1 2475408 2475704 D PFAM: protein of unknown function DUF1232; KEGG: rso:RSc2183 hypothetical protein; hypothetical protein 2475408..2475704 Ralstonia pickettii 12J 6289104 YP_001899947.1 CDS Rpic_2381 NC_010682.1 2475714 2476694 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc2184 probable NADPH:quinone reductase, zeta-crystallin homolog oxidoreductase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(2475714..2476694) Ralstonia pickettii 12J 6289105 YP_001899948.1 CDS mgsA NC_010682.1 2476691 2477131 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(2476691..2477131) Ralstonia pickettii 12J 6289106 YP_001899949.1 CDS Rpic_2383 NC_010682.1 2477142 2477933 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc2186 probable dehydrogenase/reductase oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(2477142..2477933) Ralstonia pickettii 12J 6289107 YP_001899950.1 CDS Rpic_2384 NC_010682.1 2477976 2478893 R PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: rso:RSc2187 probable transmembrane protein; hypothetical protein complement(2477976..2478893) Ralstonia pickettii 12J 6288541 YP_001899951.1 CDS Rpic_2385 NC_010682.1 2479078 2480556 D TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bmu:Bmul_5352 NCS1 nucleoside transporter family; NCS1 nucleoside transporter family 2479078..2480556 Ralstonia pickettii 12J 6288542 YP_001899952.1 CDS upp NC_010682.1 2480622 2481272 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 2480622..2481272 Ralstonia pickettii 12J 6288543 YP_001899953.1 CDS Rpic_2387 NC_010682.1 2481342 2482904 R PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: rso:RSc2189 hypothetical protein; hypothetical protein complement(2481342..2482904) Ralstonia pickettii 12J 6288544 YP_001899954.1 CDS Rpic_2388 NC_010682.1 2483078 2483803 D PFAM: protein of unknown function DUF28; KEGG: rso:RSc2190 hypothetical protein; hypothetical protein 2483078..2483803 Ralstonia pickettii 12J 6286408 YP_001899955.1 CDS Rpic_2389 NC_010682.1 2483899 2485167 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 2483899..2485167 Ralstonia pickettii 12J 6286409 YP_001899956.1 CDS Rpic_2390 NC_010682.1 2485324 2486232 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2485324..2486232 Ralstonia pickettii 12J 6286410 YP_001899957.1 CDS Rpic_2391 NC_010682.1 2486229 2486939 D catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase 2486229..2486939 Ralstonia pickettii 12J 6286411 YP_001899958.1 CDS Rpic_2392 NC_010682.1 2487011 2487628 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rso:RSc2194 hypothetical protein; iojap family protein 2487011..2487628 Ralstonia pickettii 12J 6287388 YP_001899959.1 CDS Rpic_2393 NC_010682.1 2487650 2488120 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2487650..2488120 Ralstonia pickettii 12J 6287389 YP_001899960.1 CDS Rpic_2394 NC_010682.1 2488117 2488740 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2488117..2488740 Ralstonia pickettii 12J 6287390 YP_001899961.1 CDS Rpic_2395 NC_010682.1 2488881 2490350 D TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: rso:RSc2197 probable ribonuclease G (RNase G) (cytoplasmic axial filament protein); Rne/Rng family ribonuclease 2488881..2490350 Ralstonia pickettii 12J 6287391 YP_001899962.1 CDS Rpic_2396 NC_010682.1 2490377 2490976 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rso:RSc2199 hypothetical protein; peroxidase-like protein complement(2490377..2490976) Ralstonia pickettii 12J 6288017 YP_001899963.1 CDS Rpic_2397 NC_010682.1 2491028 2492752 R KEGG: rso:RSc2200 probable composite ATP-binding transmembrane ABC transporter protein; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA complement(2491028..2492752) Ralstonia pickettii 12J 6288018 YP_001899964.1 CDS Rpic_2398 NC_010682.1 2492985 2493767 D PFAM: glycosyl transferase family 25; KEGG: reh:H16_A0903 glycosyltransferase involved in LPS biosynthesis; glycosyl transferase family protein 2492985..2493767 Ralstonia pickettii 12J 6288019 YP_001899965.1 CDS Rpic_2399 NC_010682.1 2493783 2494625 R PFAM: glycosyl transferase family 2; KEGG: pna:Pnap_2051 glycosyl transferase, family 2; family 2 glycosyl transferase complement(2493783..2494625) Ralstonia pickettii 12J 6288020 YP_001899966.1 CDS Rpic_2400 NC_010682.1 2494612 2495385 R PFAM: glycosyl transferase family 2; KEGG: pna:Pnap_2052 glycosyl transferase, family 2; family 2 glycosyl transferase complement(2494612..2495385) Ralstonia pickettii 12J 6289515 YP_001899967.1 CDS Rpic_2401 NC_010682.1 2495398 2496678 R PFAM: O-antigen polymerase; KEGG: reh:H16_A2881 membrane spanning protein involved in lipopolysaccharide biosynthesis; O-antigen polymerase complement(2495398..2496678) Ralstonia pickettii 12J 6289516 YP_001899968.1 CDS Rpic_2402 NC_010682.1 2496675 2497742 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3289 putative LPS biosynthesis-related protein; group1 glycosyl transferase complement(2496675..2497742) Ralstonia pickettii 12J 6289517 YP_001899969.1 CDS dnaE NC_010682.1 2497826 2501344 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(2497826..2501344) Ralstonia pickettii 12J 6289518 YP_001899970.1 CDS Rpic_2404 NC_010682.1 2501480 2502343 D PFAM: Rhodanese domain protein; KEGG: rso:RSc2206 hypothetical protein; rhodanese superfamily protein 2501480..2502343 Ralstonia pickettii 12J 6287884 YP_001899971.1 CDS Rpic_2405 NC_010682.1 2502530 2503102 R KEGG: rso:RSc2207 putative TRP repressor binding protein homolog; putative TRP repressor binding protein-like protein complement(2502530..2503102) Ralstonia pickettii 12J 6287885 YP_001899972.1 CDS Rpic_2406 NC_010682.1 2503181 2503879 R PFAM: Pirin domain protein; KEGG: rso:RSc2208 putative pirin-like protein; Pirin domain-containing protein complement(2503181..2503879) Ralstonia pickettii 12J 6287886 YP_001899973.1 CDS Rpic_2407 NC_010682.1 2503986 2504888 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2209 probable transcriptional regulator transcription regulator protein; LysR family transcriptional regulator 2503986..2504888 Ralstonia pickettii 12J 6287887 YP_001899974.1 CDS Rpic_2408 NC_010682.1 2504951 2505895 D this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 2504951..2505895 Ralstonia pickettii 12J 6287412 YP_001899975.1 CDS Rpic_2409 NC_010682.1 2505935 2507416 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rso:RSc2211 probable ATP-dependent RNA helicase protein; DEAD/DEAH box helicase complement(2505935..2507416) Ralstonia pickettii 12J 6287413 YP_001899976.1 CDS Rpic_2410 NC_010682.1 2507446 2508486 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc2212 hypothetical protein; beta-lactamase domain-containing protein 2507446..2508486 Ralstonia pickettii 12J 6287414 YP_001899977.1 CDS Rpic_2411 NC_010682.1 2508470 2509180 R PFAM: regulatory protein TetR; KEGG: rso:RSc2213 putative transcription regulator transcription regulator protein; TetR family transcriptional regulator complement(2508470..2509180) Ralstonia pickettii 12J 6287415 YP_001899978.1 CDS Rpic_2412 NC_010682.1 2509382 2511085 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2509382..2511085 Ralstonia pickettii 12J 6287916 YP_001899979.1 CDS Rpic_2413 NC_010682.1 2511100 2514411 D PFAM: carboxyl transferase; biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: reh:H16_A3290 biotin carboxylase; Carbamoyl-phosphate synthase L chain ATP-binding 2511100..2514411 Ralstonia pickettii 12J 6287917 YP_001899980.1 CDS Rpic_2414 NC_010682.1 2514437 2515714 D KEGG: reu:Reut_A2998 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2514437..2515714 Ralstonia pickettii 12J 6287918 YP_001899981.1 CDS Rpic_2415 NC_010682.1 2515731 2516741 R PFAM: beta-lactamase domain protein; KEGG: rso:RSc2214 hypothetical protein; beta-lactamase domain-containing protein complement(2515731..2516741) Ralstonia pickettii 12J 6287919 YP_001899982.1 CDS Rpic_2416 NC_010682.1 2517176 2517346 D hypothetical protein 2517176..2517346 Ralstonia pickettii 12J 6287512 YP_001899983.1 CDS Rpic_2417 NC_010682.1 2517557 2518381 R PFAM: OmpW family protein; KEGG: bpd:BURPS668_3131 outer membrane protein, OmpW family; OmpW family protein complement(2517557..2518381) Ralstonia pickettii 12J 6287513 YP_001899984.1 CDS Rpic_2418 NC_010682.1 2518456 2519715 R KEGG: bpd:BURPS668_3132 putative lipoprotein; putative lipoprotein complement(2518456..2519715) Ralstonia pickettii 12J 6287514 YP_001899985.1 CDS Rpic_2419 NC_010682.1 2519802 2521397 R KEGG: bur:Bcep18194_B0544 hypothetical protein; hypothetical protein complement(2519802..2521397) Ralstonia pickettii 12J 6287515 YP_001899986.1 CDS Rpic_2420 NC_010682.1 2522339 2524828 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(2522339..2524828) Ralstonia pickettii 12J 6286189 YP_001899987.1 CDS dnaG NC_010682.1 2525142 2526953 R synthesizes RNA primers at the replication forks; DNA primase complement(2525142..2526953) Ralstonia pickettii 12J 6286190 YP_001899988.1 CDS Rpic_2422 NC_010682.1 2526994 2527452 R KEGG: rso:RSc2217 hypothetical protein; hypothetical protein complement(2526994..2527452) Ralstonia pickettii 12J 6288497 YP_001899989.1 CDS Rpic_2423 NC_010682.1 2527576 2528799 R PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc2218 putative transmembrane protein; hypothetical protein complement(2527576..2528799) Ralstonia pickettii 12J 6288498 YP_001899990.1 CDS Rpic_2424 NC_010682.1 2528895 2529938 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 2528895..2529938 Ralstonia pickettii 12J 6288499 YP_001899991.1 CDS Rpic_2425 NC_010682.1 2529985 2530791 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase complement(2529985..2530791) Ralstonia pickettii 12J 6288500 YP_001899992.1 CDS Rpic_2426 NC_010682.1 2531041 2532951 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2531041..2532951) Ralstonia pickettii 12J 6287217 YP_001899993.1 CDS Rpic_2427 NC_010682.1 2533008 2533919 R PFAM: Polyprenyl synthetase; KEGG: rso:RSc2222 probable geranyltranstransferase (farnesyl-diphosphate synthase) protein; polyprenyl synthetase complement(2533008..2533919) Ralstonia pickettii 12J 6287218 YP_001899994.1 CDS Rpic_2428 NC_010682.1 2533916 2534200 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(2533916..2534200) Ralstonia pickettii 12J 6287219 YP_001899995.1 CDS Rpic_2429 NC_010682.1 2534615 2535712 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: rso:RSc2224 probable dioxygenase (alpha subunit) oxidoreductase protein; Rieske (2Fe-2S) domain-containing protein 2534615..2535712 Ralstonia pickettii 12J 6287220 YP_001899996.1 CDS Rpic_2430 NC_010682.1 2535811 2536800 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc2225 probable transmembrane protein; hypothetical protein 2535811..2536800 Ralstonia pickettii 12J 6288568 YP_001899997.1 CDS Rpic_2431 NC_010682.1 2536822 2537709 D PFAM: Rhodanese domain protein; KEGG: rso:RSc2226 probable thiosulfate sulfurtransferase protein; rhodanese domain-containing protein 2536822..2537709 Ralstonia pickettii 12J 6288569 YP_001899998.1 CDS Rpic_2432 NC_010682.1 2537779 2538585 R PFAM: zinc/iron permease; KEGG: rso:RSc2227 probable transmembrane protein; zinc/iron permease complement(2537779..2538585) Ralstonia pickettii 12J 6288570 YP_001899999.1 CDS Rpic_2433 NC_010682.1 2538735 2539613 R PFAM: dienelactone hydrolase; KEGG: rso:RSc2228 putative carboxymethylenebutenolidase (dienelactone hydrolase) protein; Carboxymethylenebutenolidase complement(2538735..2539613) Ralstonia pickettii 12J 6288571 YP_001900000.1 CDS Rpic_2434 NC_010682.1 2539722 2541056 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rso:RSc2229 probable NADH dehydrogenase, membrane flavoprotein FAD NAD ubiquinone electron transport oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2539722..2541056) Ralstonia pickettii 12J 6287712 YP_001900001.1 CDS Rpic_2435 NC_010682.1 2541264 2544077 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(2541264..2544077) Ralstonia pickettii 12J 6287713 YP_001900002.1 CDS Rpic_2436 NC_010682.1 2544082 2545035 D PFAM: conserved hypothetical protein; KEGG: rso:RSc2231 hypothetical protein; hypothetical protein 2544082..2545035 Ralstonia pickettii 12J 6287714 YP_001900003.1 CDS Rpic_2437 NC_010682.1 2545130 2545558 D KEGG: rso:RSc2232 putative transmembrane protein; hypothetical protein 2545130..2545558 Ralstonia pickettii 12J 6287715 YP_001900004.1 CDS Rpic_2438 NC_010682.1 2545643 2546647 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 2545643..2546647 Ralstonia pickettii 12J 6287657 YP_001900005.1 CDS Rpic_2439 NC_010682.1 2546638 2547435 D KEGG: rso:RSc2234 probable transmembrane protein; hypothetical protein 2546638..2547435 Ralstonia pickettii 12J 6287658 YP_001900006.1 CDS Rpic_2440 NC_010682.1 2547460 2549820 R PFAM: UvrD/REP helicase; KEGG: rso:RSc2235 probable DNA helicase II protein; UvrD/REP helicase complement(2547460..2549820) Ralstonia pickettii 12J 6287659 YP_001900007.1 CDS valS NC_010682.1 2549971 2552847 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2549971..2552847 Ralstonia pickettii 12J 6287660 YP_001900008.1 CDS Rpic_2442 NC_010682.1 2552881 2553753 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rso:RSc2237 probable UTP--glucose-1-phosphate uridylyltransferase protein; UTP-glucose-1-phosphate uridylyltransferase 2552881..2553753 Ralstonia pickettii 12J 6288099 YP_001900009.1 CDS Rpic_2443 NC_010682.1 2553885 2554841 R KEGG: rso:RSc2238 probable transmembrane protein; hypothetical protein complement(2553885..2554841) Ralstonia pickettii 12J 6288100 YP_001900010.1 CDS Rpic_2444 NC_010682.1 2555352 2555570 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2555352..2555570) Ralstonia pickettii 12J 6288101 YP_001900011.1 CDS Rpic_2445 NC_010682.1 2555918 2556211 R KEGG: rso:RSc2240 hypothetical protein; hypothetical protein complement(2555918..2556211) Ralstonia pickettii 12J 6288102 YP_001900012.1 CDS Rpic_2446 NC_010682.1 2556517 2557626 D PFAM: TM1410 hypothetical-related protein; KEGG: rso:RSc2241 hypothetical protein; hypothetical protein 2556517..2557626 Ralstonia pickettii 12J 6289452 YP_001900013.1 CDS Rpic_2447 NC_010682.1 2557604 2558830 R catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase complement(2557604..2558830) Ralstonia pickettii 12J 6289453 YP_001900014.1 CDS Rpic_2448 NC_010682.1 2558950 2559927 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2243 probable transcription regulator protein; LysR family transcriptional regulator 2558950..2559927 Ralstonia pickettii 12J 6289454 YP_001900015.1 CDS Rpic_2449 NC_010682.1 2560065 2561231 D PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc2244 probable substrate-binding periplasmic ABC transporter protein; extracellular ligand-binding receptor 2560065..2561231 Ralstonia pickettii 12J 6289455 YP_001900016.1 CDS Rpic_2450 NC_010682.1 2561235 2561936 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2245 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(2561235..2561936) Ralstonia pickettii 12J 6287617 YP_001900017.1 CDS Rpic_2451 NC_010682.1 2561929 2562702 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2246 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(2561929..2562702) Ralstonia pickettii 12J 6287618 YP_001900018.1 CDS Rpic_2452 NC_010682.1 2562699 2563733 R PFAM: inner-membrane translocator; KEGG: rso:RSc2247 probable transmembrane ABC transporter protein; inner-membrane translocator complement(2562699..2563733) Ralstonia pickettii 12J 6287619 YP_001900019.1 CDS Rpic_2453 NC_010682.1 2563730 2564599 R PFAM: inner-membrane translocator; KEGG: rso:RSc2248 probable transmembrane ABC transporter protein; inner-membrane translocator complement(2563730..2564599) Ralstonia pickettii 12J 6287620 YP_001900020.1 CDS Rpic_2454 NC_010682.1 2564680 2565078 R KEGG: rso:RSc2249 putative 4-carboxymuconolactone decarboxylase protein; TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase complement(2564680..2565078) Ralstonia pickettii 12J 6289343 YP_001900021.1 CDS Rpic_2455 NC_010682.1 2565071 2565883 R TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc2250 probable B-ketoadipate enol-lactone hydrolase transmembrane protein; 3-oxoadipate enol-lactonase complement(2565071..2565883) Ralstonia pickettii 12J 6289344 YP_001900022.1 CDS Rpic_2456 NC_010682.1 2565906 2567267 R Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase complement(2565906..2567267) Ralstonia pickettii 12J 6289345 YP_001900023.1 CDS Rpic_2457 NC_010682.1 2567275 2568477 R catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase complement(2567275..2568477) Ralstonia pickettii 12J 6289346 YP_001900024.1 CDS Rpic_2458 NC_010682.1 2568500 2569162 R KEGG: rso:RSc2253 probable 3-oxoadipate CoA-transferase subunit B protein; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(2568500..2569162) Ralstonia pickettii 12J 6288616 YP_001900025.1 CDS Rpic_2459 NC_010682.1 2569159 2569854 R KEGG: rso:RSc2254 probable 3-oxoadipate CoA-transferase subunit A protein; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(2569159..2569854) Ralstonia pickettii 12J 6288617 YP_001900026.1 CDS Rpic_2460 NC_010682.1 2570182 2570973 D TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rso:RSc2255 probable transcription regulator protein; IclR family transcriptional regulator 2570182..2570973 Ralstonia pickettii 12J 6288618 YP_001900027.1 CDS Rpic_2461 NC_010682.1 2571063 2571641 D KEGG: rso:RSc2256 putative signal peptide protein; putative signal peptide protein 2571063..2571641 Ralstonia pickettii 12J 6288619 YP_001900028.1 CDS Rpic_2462 NC_010682.1 2571998 2572843 D PFAM: extracellular solute-binding protein family 3; KEGG: rso:RSc2257 probable amino-acid-binding periplasmic ABC transporter protein; family 3 extracellular solute-binding protein 2571998..2572843 Ralstonia pickettii 12J 6289754 YP_001900029.1 CDS Rpic_2463 NC_010682.1 2572892 2573587 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2258 probable amino acid transmembrane ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 2572892..2573587 Ralstonia pickettii 12J 6289755 YP_001900030.1 CDS Rpic_2464 NC_010682.1 2573590 2574282 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2259 probable amino acid transmembrane ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 2573590..2574282 Ralstonia pickettii 12J 6289756 YP_001900031.1 CDS Rpic_2465 NC_010682.1 2574279 2575028 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2260 probable amino-acid ATP-binding ABC transporter protein; ABC transporter-like protein 2574279..2575028 Ralstonia pickettii 12J 6289757 YP_001900032.1 CDS Rpic_2466 NC_010682.1 2575101 2576024 R PFAM: extracellular solute-binding protein family 3; KEGG: rso:RSc2261 putative amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein complement(2575101..2576024) Ralstonia pickettii 12J 6289818 YP_001900033.1 CDS Rpic_2467 NC_010682.1 2576137 2577405 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(2576137..2577405) Ralstonia pickettii 12J 6289819 YP_001900034.1 CDS Rpic_2468 NC_010682.1 2577917 2579287 R KEGG: rso:RSc2270 probable transmembrane protein; hypothetical protein complement(2577917..2579287) Ralstonia pickettii 12J 6289820 YP_001900035.1 CDS Rpic_2469 NC_010682.1 2579287 2580900 R PFAM: glycosyl transferase group 1; KEGG: rso:RSc2271 hypothetical protein; group1 glycosyl transferase complement(2579287..2580900) Ralstonia pickettii 12J 6289821 YP_001900036.1 CDS Rpic_2470 NC_010682.1 2580897 2581883 R KEGG: rso:RSc2272 probable transmembrane protein; hypothetical protein complement(2580897..2581883) Ralstonia pickettii 12J 6287637 YP_001900037.1 CDS Rpic_2471 NC_010682.1 2581909 2583384 R KEGG: rso:RSc2273 probable transmembrane protein; hypothetical protein complement(2581909..2583384) Ralstonia pickettii 12J 6287638 YP_001900038.1 CDS Rpic_2472 NC_010682.1 2583384 2583944 R KEGG: rso:RSc2274 putative lipoprotein; putative lipoprotein complement(2583384..2583944) Ralstonia pickettii 12J 6287639 YP_001900039.1 CDS Rpic_2475 NC_010682.1 2588046 2590988 R PFAM: TM1410 hypothetical-related protein; KEGG: rso:RSc2276 putative signal peptide protein; hypothetical protein complement(2588046..2590988) Ralstonia pickettii 12J 6289215 YP_001900040.1 CDS Rpic_2476 NC_010682.1 2591367 2592683 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rso:RSc2277 probable transmembrane protein; hypothetical protein 2591367..2592683 Ralstonia pickettii 12J 6289216 YP_001900041.1 CDS Rpic_2477 NC_010682.1 2592623 2592979 R PFAM: Carboxymuconolactone decarboxylase; KEGG: bbt:BBta_0837 putative carboxymuconolactone decarboxylase; Carboxymuconolactone decarboxylase complement(2592623..2592979) Ralstonia pickettii 12J 6289217 YP_001900042.1 CDS Rpic_2478 NC_010682.1 2592996 2593553 R PFAM: regulatory protein MerR; KEGG: rfr:Rfer_4023 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(2592996..2593553) Ralstonia pickettii 12J 6289218 YP_001900043.1 CDS Rpic_2479 NC_010682.1 2593693 2593917 R KEGG: rso:RSc2279 signal peptide protein; signal peptide protein complement(2593693..2593917) Ralstonia pickettii 12J 6288841 YP_001900044.1 CDS Rpic_2480 NC_010682.1 2594329 2594601 D KEGG: rso:RSc2280 probable signal peptide protein; putative signal peptide protein 2594329..2594601 Ralstonia pickettii 12J 6288842 YP_001900045.1 CDS Rpic_2481 NC_010682.1 2594663 2596390 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: fal:FRAAL4174 conserved hypothetical protein; putative signal peptide; type I phosphodiesterase/nucleotide pyrophosphatase complement(2594663..2596390) Ralstonia pickettii 12J 6288843 YP_001900046.1 CDS Rpic_2482 NC_010682.1 2596613 2597434 D PFAM: MltA-interacting MipA family protein; KEGG: rso:RSc2284 putative transmembrane protein; MltA-interacting MipA family protein 2596613..2597434 Ralstonia pickettii 12J 6288844 YP_001900047.1 CDS Rpic_2483 NC_010682.1 2597735 2598202 D KEGG: bxe:Bxe_B1529 hypothetical protein; hypothetical protein 2597735..2598202 Ralstonia pickettii 12J 6288425 YP_001900048.1 CDS Rpic_2484 NC_010682.1 2598292 2599173 R SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B1057 ABC-type transporter, periplasmic component; family 3 extracellular solute-binding protein complement(2598292..2599173) Ralstonia pickettii 12J 6288426 YP_001900049.1 CDS Rpic_2485 NC_010682.1 2599269 2599754 R KEGG: reu:Reut_A1777 cytochrome c-type protein; cytochrome c-type protein complement(2599269..2599754) Ralstonia pickettii 12J 6288427 YP_001900050.1 CDS Rpic_2486 NC_010682.1 2600022 2602040 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rme:Rmet_5127 sigma54 specific transcriptional regulator with GAF sensor, fis family; GAF modulated sigma54 specific transcriptional regulator 2600022..2602040 Ralstonia pickettii 12J 6288428 YP_001900051.1 CDS Rpic_2487 NC_010682.1 2602026 2602970 R PFAM: alpha/beta hydrolase fold; KEGG: reh:H16_B1053 prolyl aminopeptidase; prolyl aminopeptidase complement(2602026..2602970) Ralstonia pickettii 12J 6289163 YP_001900052.1 CDS pqqA NC_010682.1 2603074 2603148 D Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme; coenzyme PQQ synthesis protein PqqA 2603074..2603148 Ralstonia pickettii 12J 6289164 YP_001900053.1 CDS Rpic_2489 NC_010682.1 2603292 2604209 D possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 2603292..2604209 Ralstonia pickettii 12J 6289165 YP_001900054.1 CDS Rpic_2490 NC_010682.1 2604206 2604916 D Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 2604206..2604916 Ralstonia pickettii 12J 6289166 YP_001900055.1 CDS Rpic_2491 NC_010682.1 2604897 2605169 D PFAM: coenzyme PQQ synthesis D; KEGG: reh:H16_B1050 pyrroloquinoline quinone (coenzyme PQQ) biosynthesis protein D; coenzyme PQQ synthesis D 2604897..2605169 Ralstonia pickettii 12J 6289640 YP_001900056.1 CDS Rpic_2492 NC_010682.1 2605141 2606343 D KEGG: reu:Reut_A1782 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; pyrroloquinoline quinone biosynthesis protein PqqE 2605141..2606343 Ralstonia pickettii 12J 6289641 YP_001900057.1 CDS Rpic_2493 NC_010682.1 2606419 2606751 R PFAM: cytochrome c class I; KEGG: reh:H16_B1048 cytochrome c551/c552; cytochrome c class I complement(2606419..2606751) Ralstonia pickettii 12J 6289642 YP_001900058.1 CDS Rpic_2494 NC_010682.1 2606822 2608576 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: reh:H16_B1047 quinate dehydrogenase (PQQ); PQQ-dependent dehydrogenase complement(2606822..2608576) Ralstonia pickettii 12J 6289643 YP_001900059.1 CDS Rpic_2495 NC_010682.1 2608792 2609367 R PFAM: cytochrome B561; KEGG: bxe:Bxe_B2465 putative cytochrome b561; cytochrome B561 complement(2608792..2609367) Ralstonia pickettii 12J 6286293 YP_001900060.1 CDS Rpic_2496 NC_010682.1 2609354 2610427 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: reu:Reut_B5421 WD-40 repeat; 40-residue YVTN family beta-propeller repeat-containing protein complement(2609354..2610427) Ralstonia pickettii 12J 6286294 YP_001900061.1 CDS Rpic_2497 NC_010682.1 2610448 2613069 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bvi:Bcep1808_6560 TonB-dependent receptor; TonB-dependent receptor complement(2610448..2613069) Ralstonia pickettii 12J 6286295 YP_001900062.1 CDS Rpic_2498 NC_010682.1 2613323 2614843 R PFAM: Aldehyde Dehydrogenase_; KEGG: rme:Rmet_5128 aldehyde dehydrogenase; aldehyde dehydrogenase complement(2613323..2614843) Ralstonia pickettii 12J 6286296 YP_001900063.1 CDS Rpic_2499 NC_010682.1 2614997 2615905 D KEGG: reh:H16_B1045 hypothetical membrane associated protein; hypothetical protein 2614997..2615905 Ralstonia pickettii 12J 6288095 YP_001900064.1 CDS Rpic_2500 NC_010682.1 2615902 2616849 D PFAM: beta-lactamase domain protein; KEGG: reh:H16_B1046 Zn-dependent hydrolase or glyoxylase; beta-lactamase domain-containing protein 2615902..2616849 Ralstonia pickettii 12J 6288096 YP_001900065.1 CDS Rpic_2501 NC_010682.1 2616851 2617819 D PFAM: beta-lactamase domain protein; KEGG: reh:H16_B1054 Zn-dependent hydrolase or glyoxylase; beta-lactamase domain-containing protein 2616851..2617819 Ralstonia pickettii 12J 6288097 YP_001900066.1 CDS Rpic_2502 NC_010682.1 2618081 2619211 D KEGG: mpt:Mpe_A1592 putative outer membrane protein (porin); putative outer membrane protein 2618081..2619211 Ralstonia pickettii 12J 6288098 YP_001900067.1 CDS Rpic_2503 NC_010682.1 2619400 2620311 D PFAM: phospholipid/glycerol acyltransferase; KEGG: rso:RS02093 hypothetical protein; putative acyltransferase 2619400..2620311 Ralstonia pickettii 12J 6286849 YP_001900068.1 CDS Rpic_2504 NC_010682.1 2620636 2620971 D KEGG: bvi:Bcep1808_7219 propeptide, PepSY amd peptidase M4; propeptide, PepSY amd peptidase M4 2620636..2620971 Ralstonia pickettii 12J 6286850 YP_001900069.1 CDS Rpic_2505 NC_010682.1 2621058 2621831 D PFAM: protein of unknown function DUF347; KEGG: bvi:Bcep1808_7221 protein of unknown function DUF347; hypothetical protein 2621058..2621831 Ralstonia pickettii 12J 6286851 YP_001900070.1 CDS Rpic_2506 NC_010682.1 2621857 2622309 D KEGG: bvi:Bcep1808_7222 conserved hypothetical signal peptide protein; hypothetical protein 2621857..2622309 Ralstonia pickettii 12J 6286852 YP_001900071.1 CDS Rpic_2507 NC_010682.1 2622326 2623084 D PFAM: protein of unknown function DUF347; KEGG: rme:Rmet_4979 protein of unknown function DUF347; hypothetical protein 2622326..2623084 Ralstonia pickettii 12J 6287261 YP_001900072.1 CDS Rpic_2508 NC_010682.1 2623825 2624367 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bvi:Bcep1808_6183 hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein 2623825..2624367 Ralstonia pickettii 12J 6287262 YP_001900073.1 CDS Rpic_2509 NC_010682.1 2624417 2624686 D KEGG: bvi:Bcep1808_6184 hypothetical protein; hypothetical protein 2624417..2624686 Ralstonia pickettii 12J 6287263 YP_001900074.1 CDS Rpic_2510 NC_010682.1 2624849 2625673 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bvi:Bcep1808_6185 putative transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 2624849..2625673 Ralstonia pickettii 12J 6287264 YP_001900075.1 CDS Rpic_2513 NC_010682.1 2626229 2626936 D TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: bte:BTH_II0362 succinate dehydrogenase, iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 2626229..2626936 Ralstonia pickettii 12J 6288321 YP_001900076.1 CDS Rpic_2514 NC_010682.1 2626967 2627302 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bvi:Bcep1808_6190 hypothetical protein; cupin 2626967..2627302 Ralstonia pickettii 12J 6288322 YP_001900077.1 CDS Rpic_2515 NC_010682.1 2627357 2628643 R PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_II1254 nitrate/nitrite transporter; major facilitator superfamily protein complement(2627357..2628643) Ralstonia pickettii 12J 6289483 YP_001900078.1 CDS Rpic_2516 NC_010682.1 2628675 2629460 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bpl:BURPS1106A_A1541 PPIC-type PPIase domain protein; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2628675..2629460) Ralstonia pickettii 12J 6289484 YP_001900079.1 CDS Rpic_2517 NC_010682.1 2629482 2630165 R KEGG: bmu:Bmul_5386 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase subunit gamma complement(2629482..2630165) Ralstonia pickettii 12J 6289485 YP_001900080.1 CDS Rpic_2518 NC_010682.1 2630199 2630927 R TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: bpl:BURPS1106A_A1543 nitrate reductase molybdenum cofactor assembly chaperone; nitrate reductase molybdenum cofactor assembly chaperone complement(2630199..2630927) Ralstonia pickettii 12J 6289486 YP_001900081.1 CDS Rpic_2519 NC_010682.1 2630929 2632455 R TIGRFAM: nitrate reductase, beta subunit; KEGG: bte:BTH_II1250 nitrate reductase, beta subunit; nitrate reductase subunit beta complement(2630929..2632455) Ralstonia pickettii 12J 6287233 YP_001900082.1 CDS Rpic_2520 NC_010682.1 2632452 2636207 R TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bam:Bamb_5711 nitrate reductase, alpha subunit; nitrate reductase subunit alpha complement(2632452..2636207) Ralstonia pickettii 12J 6287234 YP_001900083.1 CDS Rpic_2522 NC_010682.1 2636743 2637204 D PFAM: Integrase catalytic region; KEGG: bbt:BBta_p0210 putative insertion element protein; Integrase catalytic subunit 2636743..2637204 Ralstonia pickettii 12J 6287236 YP_001900084.1 CDS Rpic_2523 NC_010682.1 2637443 2638072 R PFAM: protein of unknown function UPF0126; KEGG: ajs:Ajs_3728 protein of unknown function UPF0126; hypothetical protein complement(2637443..2638072) Ralstonia pickettii 12J 6288067 YP_001900085.1 CDS Rpic_2524 NC_010682.1 2638069 2639334 R KEGG: reu:Reut_B5217 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(2638069..2639334) Ralstonia pickettii 12J 6288068 YP_001900086.1 CDS Rpic_2525 NC_010682.1 2639624 2640193 D KEGG: pfo:Pfl_3820 hypothetical protein; hypothetical protein 2639624..2640193 Ralstonia pickettii 12J 6288069 YP_001900087.1 CDS Rpic_2526 NC_010682.1 2640702 2641088 D KEGG: bxe:Bxe_B0910 hypothetical protein; hypothetical protein 2640702..2641088 Ralstonia pickettii 12J 6288070 YP_001900088.1 CDS Rpic_2527 NC_010682.1 2641218 2642279 D KEGG: rso:RSc2288 hypothetical protein; hypothetical protein 2641218..2642279 Ralstonia pickettii 12J 6288162 YP_001900089.1 CDS Rpic_2528 NC_010682.1 2642269 2642826 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RS03915 putative thiol:disulfide interchange protein; alkyl hydroperoxide reductase 2642269..2642826 Ralstonia pickettii 12J 6288163 YP_001900090.1 CDS Rpic_2529 NC_010682.1 2643211 2643423 D KEGG: rso:RSc0850 hypothetical protein; hypothetical protein 2643211..2643423 Ralstonia pickettii 12J 6288164 YP_001900091.1 CDS Rpic_2530 NC_010682.1 2643760 2644533 R KEGG: aav:Aave_2651 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase complement(2643760..2644533) Ralstonia pickettii 12J 6288165 YP_001900092.1 CDS Rpic_2532 NC_010682.1 2645020 2645415 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azo:azo1226 lactoylglutathione lyase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(2645020..2645415) Ralstonia pickettii 12J 6287670 YP_001900093.1 CDS Rpic_2533 NC_010682.1 2645419 2645766 R KEGG: vei:Veis_2704 hypothetical protein; arylsulfate sulfotransferase complement(2645419..2645766) Ralstonia pickettii 12J 6287671 YP_001900094.1 CDS Rpic_2534 NC_010682.1 2645805 2647373 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: mpt:Mpe_A0945 putative 2-keto-gluconate dehydrogenase; gluconate 2-dehydrogenase complement(2645805..2647373) Ralstonia pickettii 12J 6287672 YP_001900095.1 CDS Rpic_2535 NC_010682.1 2647494 2648102 R KEGG: vei:Veis_2706 hypothetical protein; hypothetical protein complement(2647494..2648102) Ralstonia pickettii 12J 6289296 YP_001900096.1 CDS Rpic_2536 NC_010682.1 2648200 2648595 R PFAM: cytochrome c class I; KEGG: rme:Rmet_3424 cytochrome c, class I; cytochrome c class I complement(2648200..2648595) Ralstonia pickettii 12J 6289297 YP_001900097.1 CDS Rpic_2537 NC_010682.1 2648709 2648864 D hypothetical protein 2648709..2648864 Ralstonia pickettii 12J 6289298 YP_001900098.1 CDS Rpic_2538 NC_010682.1 2649220 2649516 R KEGG: ppd:Ppro_0272 putative phage repressor; hypothetical protein complement(2649220..2649516) Ralstonia pickettii 12J 6289299 YP_001900099.1 CDS Rpic_2539 NC_010682.1 2649653 2649967 D KEGG: rme:Rmet_4494 hypothetical protein; hypothetical protein 2649653..2649967 Ralstonia pickettii 12J 6288258 YP_001900100.1 CDS Rpic_2540 NC_010682.1 2650032 2650325 D hypothetical protein 2650032..2650325 Ralstonia pickettii 12J 6288259 YP_001900101.1 CDS Rpic_2541 NC_010682.1 2650325 2650510 D hypothetical protein 2650325..2650510 Ralstonia pickettii 12J 6288260 YP_001900102.1 CDS Rpic_2542 NC_010682.1 2650510 2650659 D hypothetical protein 2650510..2650659 Ralstonia pickettii 12J 6288261 YP_001900103.1 CDS Rpic_2543 NC_010682.1 2650659 2650907 D hypothetical protein 2650659..2650907 Ralstonia pickettii 12J 6287876 YP_001900104.1 CDS Rpic_2544 NC_010682.1 2650904 2651146 D KEGG: xom:XOO_2144 hypothetical protein; hypothetical protein 2650904..2651146 Ralstonia pickettii 12J 6287877 YP_001900105.1 CDS Rpic_2545 NC_010682.1 2651146 2651277 D hypothetical protein 2651146..2651277 Ralstonia pickettii 12J 6287878 YP_001900106.1 CDS Rpic_2546 NC_010682.1 2651290 2652744 D KEGG: lma:LmjF35.0540 proteophosphoglycan 5; hypothetical protein 2651290..2652744 Ralstonia pickettii 12J 6287879 YP_001900107.1 CDS Rpic_2547 NC_010682.1 2652744 2653061 D KEGG: pmy:Pmen_2113 hypothetical protein; hypothetical protein 2652744..2653061 Ralstonia pickettii 12J 6288323 YP_001900108.1 CDS Rpic_2548 NC_010682.1 2653069 2654199 D PFAM: Zonular occludens toxin; KEGG: pmy:Pmen_2112 zonular occludens toxin; Zonular occludens toxin 2653069..2654199 Ralstonia pickettii 12J 6288324 YP_001900109.1 CDS Rpic_2549 NC_010682.1 2654659 2655543 D KEGG: rme:Rmet_4488 hypothetical protein; hypothetical protein 2654659..2655543 Ralstonia pickettii 12J 6288325 YP_001900110.1 CDS Rpic_2550 NC_010682.1 2655890 2656480 R PFAM: Resolvase domain; KEGG: bpd:BURPS668_2984 putative site-specific recombinases, DNA invertase Pin; resolvase domain-containing protein complement(2655890..2656480) Ralstonia pickettii 12J 6288326 YP_001900111.1 CDS Rpic_2551 NC_010682.1 2656705 2658021 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(2656705..2658021) Ralstonia pickettii 12J 6289368 YP_001900112.1 CDS Rpic_2552 NC_010682.1 2658102 2659409 R PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rso:RSc2338 recombination factor protein RarA; recombination factor protein RarA complement(2658102..2659409) Ralstonia pickettii 12J 6289369 YP_001900113.1 CDS Rpic_2553 NC_010682.1 2659436 2660344 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3439 transcriptional regulator, LysR family; LysR family transcriptional regulator 2659436..2660344 Ralstonia pickettii 12J 6289385 YP_001900114.1 CDS Rpic_2554 NC_010682.1 2660362 2660787 R KEGG: rso:RSc2339 probable lipoprotein transmembrane; putative transmembrane lipoprotein complement(2660362..2660787) Ralstonia pickettii 12J 6289386 YP_001900115.1 CDS lolA NC_010682.1 2660823 2661470 R participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein complement(2660823..2661470) Ralstonia pickettii 12J 6289387 YP_001900116.1 CDS Rpic_2556 NC_010682.1 2661580 2663925 R PFAM: cell divisionFtsK/SpoIIIE; KEGG: rso:RSc2341 probable cell division FtsK transmembrane protein; cell division protein FtsK complement(2661580..2663925) Ralstonia pickettii 12J 6289388 YP_001900117.1 CDS Rpic_2557 NC_010682.1 2664135 2665091 D TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc2342 probable thioredoxin reductase oxidoreductase protein; thioredoxin reductase 2664135..2665091 Ralstonia pickettii 12J 6287002 YP_001900118.1 CDS Rpic_2558 NC_010682.1 2665221 2665886 D PFAM: Smr protein/MutS2; KEGG: rso:RSc2343 hypothetical protein; Smr protein/MutS2 2665221..2665886 Ralstonia pickettii 12J 6287003 YP_001900119.1 CDS Rpic_2559 NC_010682.1 2665932 2666555 D PFAM: protein of unknown function UPF0126; KEGG: rso:RSc2344 probable transmembrane protein; hypothetical protein 2665932..2666555 Ralstonia pickettii 12J 6287004 YP_001900120.1 CDS Rpic_2560 NC_010682.1 2666600 2666938 R PFAM: nitrogen regulatory protein P-II; KEGG: rso:RSc2345 probable nitrogen regulatory P-II transcription regulator protein; nitrogen regulatory protein P-II complement(2666600..2666938) Ralstonia pickettii 12J 6287005 YP_001900121.1 CDS Rpic_2561 NC_010682.1 2666953 2667579 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc2346 putative methyltransferase protein; type 11 methyltransferase complement(2666953..2667579) Ralstonia pickettii 12J 6289846 YP_001900122.1 CDS Rpic_2562 NC_010682.1 2667589 2669226 R NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(2667589..2669226) Ralstonia pickettii 12J 6289847 YP_001900123.1 CDS Rpic_2563 NC_010682.1 2669282 2670514 D PFAM: protein of unknown function DUF482; KEGG: rso:RSc2348 hypothetical protein; hypothetical protein 2669282..2670514 Ralstonia pickettii 12J 6289848 YP_001900124.1 CDS Rpic_2564 NC_010682.1 2670580 2670786 R hypothetical protein complement(2670580..2670786) Ralstonia pickettii 12J 6289849 YP_001900125.1 CDS Rpic_2565 NC_010682.1 2671088 2671615 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(2671088..2671615) Ralstonia pickettii 12J 6286207 YP_001900126.1 CDS Rpic_2566 NC_010682.1 2671785 2673221 D PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RSc2350 probable aldehyde dehydrogenase oxidoreductase protein; aldehyde dehydrogenase 2671785..2673221 Ralstonia pickettii 12J 6286208 YP_001900127.1 CDS fabG NC_010682.1 2673262 2674020 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2673262..2674020 Ralstonia pickettii 12J 6286209 YP_001900128.1 CDS Rpic_2568 NC_010682.1 2674143 2675477 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2352 probable permease transmembrane protein; major facilitator superfamily protein 2674143..2675477 Ralstonia pickettii 12J 6286210 YP_001900129.1 CDS Rpic_2569 NC_010682.1 2675525 2676718 R PFAM: HemY domain protein; KEGG: rso:RSc2355 putative protein porphyrin biosynthesis; HemY domain-containing protein complement(2675525..2676718) Ralstonia pickettii 12J 6288584 YP_001900130.1 CDS Rpic_2570 NC_010682.1 2676721 2678829 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase complement(2676721..2678829) Ralstonia pickettii 12J 6288585 YP_001900131.1 CDS hemC NC_010682.1 2678845 2679861 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(2678845..2679861) Ralstonia pickettii 12J 6288586 YP_001900132.1 CDS Rpic_2572 NC_010682.1 2679971 2682976 D catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 2679971..2682976 Ralstonia pickettii 12J 6288587 YP_001900133.1 CDS Rpic_2574 NC_010682.1 2683567 2684172 R KEGG: rso:RSc2360 hypothetical protein; hypothetical protein complement(2683567..2684172) Ralstonia pickettii 12J 6287509 YP_001900134.1 CDS Rpic_2575 NC_010682.1 2684381 2685028 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rso:RSc2361 probable RNA polymerase sigma-E factor sigma-24 homolog transcription regulator protein; ECF subfamily RNA polymerase sigma-24 subunit 2684381..2685028 Ralstonia pickettii 12J 6287510 YP_001900135.1 CDS Rpic_2576 NC_010682.1 2685028 2685747 D KEGG: rso:RSc2362 probable transmembrane protein; hypothetical protein 2685028..2685747 Ralstonia pickettii 12J 6287511 YP_001900136.1 CDS Rpic_2577 NC_010682.1 2685851 2687266 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2685851..2687266 Ralstonia pickettii 12J 6286358 YP_001900137.1 CDS Rpic_2578 NC_010682.1 2687339 2689618 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: rso:RSc2365 probable biodegradative arginine decarboxylase protein; lysine decarboxylase complement(2687339..2689618) Ralstonia pickettii 12J 6286359 YP_001900138.1 CDS dcd NC_010682.1 2689692 2690258 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(2689692..2690258) Ralstonia pickettii 12J 6286360 YP_001900139.1 CDS Rpic_2580 NC_010682.1 2690455 2691330 R PFAM: formate dehydrogenase subunit FdhD; KEGG: rso:RSc2367 probable FdhD protein homolog; formate dehydrogenase subunit FdhD complement(2690455..2691330) Ralstonia pickettii 12J 6286361 YP_001900140.1 CDS Rpic_2581 NC_010682.1 2691421 2691972 R PFAM: superoxide dismutase copper/zinc binding; KEGG: rso:RSc2368 probable superoxide dismutase Cu-Zn precursor protein; copper/zinc binding superoxide dismutase complement(2691421..2691972) Ralstonia pickettii 12J 6286677 YP_001900141.1 CDS Rpic_2582 NC_010682.1 2692055 2692378 R KEGG: rso:RSc2369 hypothetical signal peptide protein; hypothetical protein complement(2692055..2692378) Ralstonia pickettii 12J 6286678 YP_001900142.1 CDS Rpic_2583 NC_010682.1 2692414 2693577 R TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: rso:RSc2370 hypothetical protein; formate dehydrogenase subunit gamma complement(2692414..2693577) Ralstonia pickettii 12J 6286679 YP_001900143.1 CDS Rpic_2584 NC_010682.1 2693601 2693846 R KEGG: rso:RSc2371 putative lipoprotein; putative lipoprotein complement(2693601..2693846) Ralstonia pickettii 12J 6286680 YP_001900144.1 CDS Rpic_2585 NC_010682.1 2693843 2694511 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RSc2372 probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein; 4Fe-4S ferredoxin complement(2693843..2694511) Ralstonia pickettii 12J 6289037 YP_001900145.1 CDS Rpic_2586 NC_010682.1 2694528 2697533 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rso:RSc2373 probable formate dehydrogenase (large subunit) oxidoreductase protein; molybdopterin oxidoreductase complement(2694528..2697533) Ralstonia pickettii 12J 6289038 YP_001900146.1 CDS Rpic_2587 NC_010682.1 2697601 2697852 R TIGRFAM: formate dehydrogenase region TAT target; KEGG: rso:RSc2374 putative transmembrane protein; formate dehydrogenase region TAT target complement(2697601..2697852) Ralstonia pickettii 12J 6289039 YP_001900147.1 CDS Rpic_2588 NC_010682.1 2698088 2698759 R PFAM: cytoplasmic chaperone TorD family protein; KEGG: rso:RSc2375 hypothetical protein; cytoplasmic chaperone TorD family protein complement(2698088..2698759) Ralstonia pickettii 12J 6289040 YP_001900148.1 CDS Rpic_2589 NC_010682.1 2698805 2700964 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RSc2376 putative ferredoxin protein; 4Fe-4S ferredoxin complement(2698805..2700964) Ralstonia pickettii 12J 6287776 YP_001900149.1 CDS Rpic_2590 NC_010682.1 2701045 2701605 R KEGG: rso:RSc2377 proline rich protein; proline rich protein complement(2701045..2701605) Ralstonia pickettii 12J 6287777 YP_001900150.1 CDS Rpic_2591 NC_010682.1 2701617 2702156 R KEGG: rso:RSc2378 hypothetical protein; hypothetical protein complement(2701617..2702156) Ralstonia pickettii 12J 6287778 YP_001900151.1 CDS Rpic_2592 NC_010682.1 2702167 2703258 R PFAM: protein of unknown function DUF59; KEGG: rso:RSc2379 probable MRP protein ATP-binding; hypothetical protein complement(2702167..2703258) Ralstonia pickettii 12J 6287779 YP_001900152.1 CDS Rpic_2593 NC_010682.1 2703461 2704090 D PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: rso:RSc2380 probable transmembrane protein; OmpA/MotB domain-containing protein 2703461..2704090 Ralstonia pickettii 12J 6288311 YP_001900153.1 CDS metG NC_010682.1 2704334 2706466 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2704334..2706466 Ralstonia pickettii 12J 6288312 YP_001900154.1 CDS Rpic_2595 NC_010682.1 2706575 2707117 R KEGG: rso:RSc2382 probable lipoprotein; putative lipoprotein complement(2706575..2707117) Ralstonia pickettii 12J 6288313 YP_001900155.1 CDS Rpic_2596 NC_010682.1 2707213 2711127 R PFAM: protein of unknown function DUF490; KEGG: rso:RSc2383 putative signal peptide protein; hypothetical protein complement(2707213..2711127) Ralstonia pickettii 12J 6288314 YP_001900156.1 CDS Rpic_2597 NC_010682.1 2711130 2712917 R PFAM: surface antigen (D15); KEGG: rso:RSc2384 putative lipoprotein; surface antigen (D15) complement(2711130..2712917) Ralstonia pickettii 12J 6287372 YP_001900157.1 CDS Rpic_2598 NC_010682.1 2713155 2713343 D KEGG: rso:RSc2385 hypothetical protein; hypothetical protein 2713155..2713343 Ralstonia pickettii 12J 6287373 YP_001900158.1 CDS Rpic_2599 NC_010682.1 2713383 2714264 D PFAM: chromosome segregation and condensation protein ScpA; KEGG: rso:RSc2386 hypothetical protein; chromosome segregation and condensation protein ScpA 2713383..2714264 Ralstonia pickettii 12J 6287374 YP_001900159.1 CDS panC NC_010682.1 2714303 2715154 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2714303..2715154 Ralstonia pickettii 12J 6287375 YP_001900160.1 CDS Rpic_2601 NC_010682.1 2715382 2716581 D PFAM: integrase family protein; KEGG: rme:Rmet_3045 phage integrase; integrase family protein 2715382..2716581 Ralstonia pickettii 12J 6289867 YP_001900161.1 CDS Rpic_2602 NC_010682.1 2716578 2717714 D PFAM: protein of unknown function DUF1016; KEGG: dac:Daci_2744 protein of unknown function DUF1016; hypothetical protein 2716578..2717714 Ralstonia pickettii 12J 6289868 YP_001900162.1 CDS Rpic_2603 NC_010682.1 2717760 2718548 R KEGG: rme:Rmet_3043 hypothetical protein; hypothetical protein complement(2717760..2718548) Ralstonia pickettii 12J 6289869 YP_001900163.1 CDS Rpic_2604 NC_010682.1 2718555 2719457 R KEGG: dac:Daci_2742 hypothetical protein; hypothetical protein complement(2718555..2719457) Ralstonia pickettii 12J 6289870 YP_001900164.1 CDS Rpic_2605 NC_010682.1 2719547 2720740 D KEGG: dac:Daci_2741 hypothetical protein; hypothetical protein 2719547..2720740 Ralstonia pickettii 12J 6289428 YP_001900165.1 CDS Rpic_2606 NC_010682.1 2720737 2722992 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: dac:Daci_2740 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 2720737..2722992 Ralstonia pickettii 12J 6289429 YP_001900166.1 CDS Rpic_2607 NC_010682.1 2723038 2724108 D KEGG: dac:Daci_2739 hypothetical protein; hypothetical protein 2723038..2724108 Ralstonia pickettii 12J 6289430 YP_001900167.1 CDS Rpic_2608 NC_010682.1 2724485 2724835 D KEGG: rme:Rmet_3038 hypothetical protein; hypothetical protein 2724485..2724835 Ralstonia pickettii 12J 6289431 YP_001900168.1 CDS Rpic_2609 NC_010682.1 2724899 2725177 D KEGG: dac:Daci_2737 hypothetical protein; hypothetical protein 2724899..2725177 Ralstonia pickettii 12J 6287784 YP_001900169.1 CDS Rpic_2610 NC_010682.1 2725320 2725619 R KEGG: rme:Rmet_3036 hypothetical protein; hypothetical protein complement(2725320..2725619) Ralstonia pickettii 12J 6287785 YP_001900170.1 CDS Rpic_2611 NC_010682.1 2726555 2727379 D PFAM: protein of unknown function DUF932; KEGG: dac:Daci_0468 protein of unknown function DUF932; hypothetical protein 2726555..2727379 Ralstonia pickettii 12J 6287786 YP_001900171.1 CDS Rpic_2612 NC_010682.1 2727445 2729484 D PFAM: ParB domain protein nuclease; KEGG: ajs:Ajs_2943 ParB domain protein nuclease; ParB domain-containing protein nuclease 2727445..2729484 Ralstonia pickettii 12J 6287787 YP_001900172.1 CDS Rpic_2613 NC_010682.1 2729547 2729756 D KEGG: ajs:Ajs_2942 hypothetical protein; hypothetical protein 2729547..2729756 Ralstonia pickettii 12J 6288091 YP_001900173.1 CDS Rpic_2614 NC_010682.1 2729973 2730434 D KEGG: pst:PSPTO_0583 hypothetical protein; hypothetical protein 2729973..2730434 Ralstonia pickettii 12J 6288092 YP_001900174.1 CDS Rpic_2615 NC_010682.1 2731222 2731536 D PFAM: protein of unknown function DUF736; KEGG: rme:Rmet_3029 protein of unknown function DUF736; hypothetical protein 2731222..2731536 Ralstonia pickettii 12J 6288093 YP_001900175.1 CDS Rpic_2616 NC_010682.1 2731902 2732195 R PFAM: helix-turn-helix domain protein; KEGG: dac:Daci_2729 helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(2731902..2732195) Ralstonia pickettii 12J 6288094 YP_001900176.1 CDS Rpic_2617 NC_010682.1 2732419 2732766 D KEGG: dac:Daci_2728 putative lipoprotein; putative lipoprotein 2732419..2732766 Ralstonia pickettii 12J 6289092 YP_001900177.1 CDS Rpic_2618 NC_010682.1 2733108 2733857 D KEGG: ajs:Ajs_2935 hypothetical protein; hypothetical protein 2733108..2733857 Ralstonia pickettii 12J 6289093 YP_001900178.1 CDS Rpic_2619 NC_010682.1 2733941 2734222 D KEGG: rme:Rmet_3025 hypothetical protein; hypothetical protein 2733941..2734222 Ralstonia pickettii 12J 6289094 YP_001900179.1 CDS Rpic_2620 NC_010682.1 2734249 2735097 D KEGG: rme:Rmet_3024 conserved hypothetical replication initiator and transcription repressor protein; hypothetical protein 2734249..2735097 Ralstonia pickettii 12J 6289095 YP_001900180.1 CDS Rpic_2621 NC_010682.1 2735351 2735989 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rme:Rmet_3023 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 2735351..2735989 Ralstonia pickettii 12J 6289339 YP_001900181.1 CDS Rpic_2622 NC_010682.1 2735986 2736249 D KEGG: rme:Rmet_3022 hypothetical protein; hypothetical protein 2735986..2736249 Ralstonia pickettii 12J 6289340 YP_001900182.1 CDS Rpic_2623 NC_010682.1 2736246 2736779 D KEGG: rme:Rmet_3021 hypothetical protein; hypothetical protein 2736246..2736779 Ralstonia pickettii 12J 6289341 YP_001900183.1 CDS Rpic_2624 NC_010682.1 2736776 2737363 D KEGG: rme:Rmet_3020 putative conjugal transfer TRAF transmembrane protein; putative conjugal transfer TRAF transmembrane protein 2736776..2737363 Ralstonia pickettii 12J 6289342 YP_001900184.1 CDS Rpic_2625 NC_010682.1 2737800 2739782 D KEGG: dac:Daci_0453 hypothetical protein; hypothetical protein 2737800..2739782 Ralstonia pickettii 12J 6288234 YP_001900185.1 CDS Rpic_2627 NC_010682.1 2740659 2741441 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rfr:Rfer_0998 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2740659..2741441) Ralstonia pickettii 12J 6288236 YP_001900186.1 CDS Rpic_2628 NC_010682.1 2741476 2742261 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azo:azo1927 probable enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(2741476..2742261) Ralstonia pickettii 12J 6288237 YP_001900187.1 CDS Rpic_2629 NC_010682.1 2742273 2743454 R TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rrs:RoseRS_2545 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase complement(2742273..2743454) Ralstonia pickettii 12J 6286308 YP_001900188.1 CDS Rpic_2630 NC_010682.1 2743483 2745159 R PFAM: AMP-dependent synthetase and ligase; KEGG: dol:Dole_2557 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2743483..2745159) Ralstonia pickettii 12J 6286309 YP_001900189.1 CDS Rpic_2631 NC_010682.1 2745171 2746220 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rme:Rmet_2692 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2745171..2746220) Ralstonia pickettii 12J 6286310 YP_001900190.1 CDS Rpic_2632 NC_010682.1 2746223 2747368 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reh:H16_B0699 acyl-CoA dehydrogenase, long-chain specific; acyl-CoA dehydrogenase domain-containing protein complement(2746223..2747368) Ralstonia pickettii 12J 6286311 YP_001900191.1 CDS Rpic_2633 NC_010682.1 2747563 2748591 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bvi:Bcep1808_5639 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 2747563..2748591 Ralstonia pickettii 12J 6287428 YP_001900192.1 CDS Rpic_2634 NC_010682.1 2748564 2748671 R hypothetical protein complement(2748564..2748671) Ralstonia pickettii 12J 6287429 YP_001900193.1 CDS Rpic_2635 NC_010682.1 2748939 2749988 D PFAM: beta-lactamase domain protein; KEGG: reh:H16_B1182 metallo-beta-lactamase; beta-lactamase domain-containing protein 2748939..2749988 Ralstonia pickettii 12J 6287430 YP_001900194.1 CDS Rpic_2636 NC_010682.1 2750177 2750455 R KEGG: ajs:Ajs_2731 transposase family protein; transposase family protein complement(2750177..2750455) Ralstonia pickettii 12J 6287431 YP_001900195.1 CDS Rpic_2637 NC_010682.1 2750723 2752090 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pna:Pnap_2108 major facilitator superfamily MFS_1; major facilitator superfamily protein 2750723..2752090 Ralstonia pickettii 12J 6288457 YP_001900196.1 CDS Rpic_2638 NC_010682.1 2752115 2753896 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: azo:azo1702 probable acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2752115..2753896 Ralstonia pickettii 12J 6288458 YP_001900197.1 CDS Rpic_2639 NC_010682.1 2753921 2754670 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_3731 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein alpha/beta-subunit 2753921..2754670 Ralstonia pickettii 12J 6288459 YP_001900198.1 CDS Rpic_2640 NC_010682.1 2754671 2755603 D PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: vei:Veis_2092 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 2754671..2755603 Ralstonia pickettii 12J 6288460 YP_001900199.1 CDS Rpic_2641 NC_010682.1 2755621 2756535 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_2703 transcriptional regulator, LysR family; LysR family transcriptional regulator 2755621..2756535 Ralstonia pickettii 12J 6289041 YP_001900200.1 CDS Rpic_2642 NC_010682.1 2756561 2756791 D KEGG: dac:Daci_0441 hypothetical protein; hypothetical protein 2756561..2756791 Ralstonia pickettii 12J 6289042 YP_001900201.1 CDS Rpic_2643 NC_010682.1 2757009 2759027 D type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 2757009..2759027 Ralstonia pickettii 12J 6289043 YP_001900202.1 CDS Rpic_2644 NC_010682.1 2759024 2759488 D KEGG: dac:Daci_2700 CopG domain protein DNA-binding domain protein; DNA-binding domain-containing protein 2759024..2759488 Ralstonia pickettii 12J 6289044 YP_001900203.1 CDS Rpic_2645 NC_010682.1 2759485 2760522 D TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: ajs:Ajs_2911 type II secretion system protein E; P-type conjugative transfer ATPase TrbB 2759485..2760522 Ralstonia pickettii 12J 6287947 YP_001900204.1 CDS Rpic_2646 NC_010682.1 2760519 2760911 D PFAM: Conjugal transfer protein TrbC; KEGG: ajs:Ajs_2910 conjugal transfer protein TrbC; conjugal transfer protein Trbc 2760519..2760911 Ralstonia pickettii 12J 6287948 YP_001900205.1 CDS Rpic_2647 NC_010682.1 2760908 2761192 D KEGG: bmu:Bmul_2352 putative conjugal transfer TrbD transmembrane protein; putative conjugal transfer TrbD transmembrane protein 2760908..2761192 Ralstonia pickettii 12J 6287949 YP_001900206.1 CDS Rpic_2648 NC_010682.1 2761212 2763689 D type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 2761212..2763689 Ralstonia pickettii 12J 6287950 YP_001900207.1 CDS Rpic_2649 NC_010682.1 2763686 2764441 D TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: dac:Daci_2695 P-type conjugative transfer protein TrbJ; conjugal transfer protein TrbJ 2763686..2764441 Ralstonia pickettii 12J 6288809 YP_001900208.1 CDS Rpic_2650 NC_010682.1 2764454 2765806 D type IV secretion VirB6 family; conjugal transfer protein TrbL 2764454..2765806 Ralstonia pickettii 12J 6288810 YP_001900209.1 CDS Rpic_2651 NC_010682.1 2765825 2766529 D PFAM: Conjugal transfer protein; KEGG: ajs:Ajs_2904 conjugal transfer protein; conjugal transfer protein TrbF 2765825..2766529 Ralstonia pickettii 12J 6288811 YP_001900210.1 CDS Rpic_2652 NC_010682.1 2766526 2767521 D TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: dac:Daci_2691 P-type conjugative transfer protein TrbG; P-type conjugative transfer protein TrbG 2766526..2767521 Ralstonia pickettii 12J 6288812 YP_001900211.1 CDS Rpic_2653 NC_010682.1 2767524 2768795 D PFAM: conjugation TrbI family protein; KEGG: dac:Daci_2690 conjugation TrbI family protein; conjugation TrbI family protein 2767524..2768795 Ralstonia pickettii 12J 6286625 YP_001900212.1 CDS Rpic_2654 NC_010682.1 2768792 2769037 D KEGG: aav:Aave_0736 hypothetical protein; hypothetical protein 2768792..2769037 Ralstonia pickettii 12J 6286626 YP_001900213.1 CDS Rpic_2655 NC_010682.1 2769315 2769980 R KEGG: rso:RSc2389 putative partition-related protein; putative partition-like protein complement(2769315..2769980) Ralstonia pickettii 12J 6286627 YP_001900214.1 CDS Rpic_2656 NC_010682.1 2770055 2771551 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(2770055..2771551) Ralstonia pickettii 12J 6286628 YP_001900215.1 CDS Rpic_2657 NC_010682.1 2771613 2772188 D PFAM: cobalbumin biosynthesis protein; KEGG: rso:RSc2391 probable cobalamin biosynthesis bifunctional protein: cobinamide kinase and cobinamide phosphate guanylyltransferase; adenosylcobinamide-phosphate guanylyltransferase 2771613..2772188 Ralstonia pickettii 12J 6288275 YP_001900216.1 CDS cobD NC_010682.1 2772185 2773165 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 2772185..2773165 Ralstonia pickettii 12J 6288276 YP_001900217.1 CDS Rpic_2659 NC_010682.1 2773162 2774169 D cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; putative threonine-phosphate decarboxylase 2773162..2774169 Ralstonia pickettii 12J 6288277 YP_001900218.1 CDS Rpic_2660 NC_010682.1 2774180 2775136 D PFAM: periplasmic binding protein; KEGG: rso:RSc2394 probable substrate-binding periplasmic (PBP) ABC transporter protein; periplasmic binding protein 2774180..2775136 Ralstonia pickettii 12J 6288278 YP_001900219.1 CDS Rpic_2661 NC_010682.1 2775149 2775727 R TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; KEGG: rso:RSc2395 hypothetical protein; alpha-ribazole phosphatase complement(2775149..2775727) Ralstonia pickettii 12J 6288335 YP_001900220.1 CDS cobS NC_010682.1 2775712 2776482 R catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase complement(2775712..2776482) Ralstonia pickettii 12J 6288336 YP_001900221.1 CDS cobT NC_010682.1 2776479 2777543 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2776479..2777543) Ralstonia pickettii 12J 6288337 YP_001900222.1 CDS Rpic_2664 NC_010682.1 2777543 2778163 R KEGG: rme:Rmet_2786 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase complement(2777543..2778163) Ralstonia pickettii 12J 6288338 YP_001900223.1 CDS Rpic_2665 NC_010682.1 2778153 2778998 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2398 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(2778153..2778998) Ralstonia pickettii 12J 6288604 YP_001900224.1 CDS Rpic_2666 NC_010682.1 2778995 2780005 R PFAM: transport system permease protein; KEGG: rso:RSc2399 probable transmembrane ABC transporter protein; transport system permease complement(2778995..2780005) Ralstonia pickettii 12J 6288605 YP_001900225.1 CDS Rpic_2667 NC_010682.1 2780002 2781885 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RSc2400 probable outer membrane receptor protein; TonB-dependent receptor complement(2780002..2781885) Ralstonia pickettii 12J 6288606 YP_001900226.1 CDS Rpic_2668 NC_010682.1 2782441 2782755 D KEGG: rso:RSc2401 hypothetical protein; hypothetical protein 2782441..2782755 Ralstonia pickettii 12J 6288607 YP_001900227.1 CDS Rpic_2669 NC_010682.1 2782758 2783075 D PFAM: protein of unknown function DUF710; KEGG: rso:RSc2402 hypothetical protein; hypothetical protein 2782758..2783075 Ralstonia pickettii 12J 6288620 YP_001900228.1 CDS Rpic_2670 NC_010682.1 2783662 2784132 D PFAM: protein of unknown function DUF55; KEGG: rso:RSc2403 hypothetical protein; hypothetical protein 2783662..2784132 Ralstonia pickettii 12J 6288622 YP_001900229.1 CDS Rpic_2671 NC_010682.1 2784226 2784927 D PFAM: protein of unknown function DUF541; KEGG: reu:Reut_A0649 protein of unknown function DUF541; hypothetical protein 2784226..2784927 Ralstonia pickettii 12J 6288821 YP_001900230.1 CDS Rpic_2672 NC_010682.1 2784972 2785799 R PFAM: Integrase catalytic region; KEGG: pol:Bpro_3089 integrase, catalytic region; Integrase catalytic subunit complement(2784972..2785799) Ralstonia pickettii 12J 6288822 YP_001900231.1 CDS Rpic_2673 NC_010682.1 2785802 2786200 R KEGG: pol:Bpro_1225 ISPsy11, transposase OrfA; ISPsy11, transposase OrfA complement(2785802..2786200) Ralstonia pickettii 12J 6288823 YP_001900232.1 CDS Rpic_2674 NC_010682.1 2786312 2787214 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(2786312..2787214) Ralstonia pickettii 12J 6287149 YP_001900233.1 CDS Rpic_2675 NC_010682.1 2787229 2788173 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2411 probable transcription regulator protein; LysR family transcriptional regulator complement(2787229..2788173) Ralstonia pickettii 12J 6287150 YP_001900234.1 CDS Rpic_2676 NC_010682.1 2788302 2789975 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2788302..2789975 Ralstonia pickettii 12J 6287151 YP_001900235.1 CDS Rpic_2677 NC_010682.1 2790031 2790456 R KEGG: rso:RSc2413 hypothetical protein; hypothetical protein complement(2790031..2790456) Ralstonia pickettii 12J 6287152 YP_001900236.1 CDS Rpic_2678 NC_010682.1 2790453 2790881 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(2790453..2790881) Ralstonia pickettii 12J 6288699 YP_001900237.1 CDS Rpic_2679 NC_010682.1 2790904 2792412 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(2790904..2792412) Ralstonia pickettii 12J 6288700 YP_001900238.1 CDS Rpic_2680 NC_010682.1 2792551 2793669 D PFAM: permease YjgP/YjgQ family protein; KEGG: rso:RSc2416 probable transmembrane protein; YjgP/YjgQ family permease 2792551..2793669 Ralstonia pickettii 12J 6288701 YP_001900239.1 CDS Rpic_2681 NC_010682.1 2793669 2794862 D PFAM: permease YjgP/YjgQ family protein; KEGG: rso:RSc2417 probable transmembrane protein; YjgP/YjgQ family permease 2793669..2794862 Ralstonia pickettii 12J 6288702 YP_001900240.1 CDS Rpic_2682 NC_010682.1 2794862 2795233 D PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rso:RSc2418 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 2794862..2795233 Ralstonia pickettii 12J 6286703 YP_001900241.1 CDS Rpic_2683 NC_010682.1 2795244 2795645 R PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: rso:RSc2419 putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase protein; 5-carboxymethyl-2-hydroxymuconate isomerase complement(2795244..2795645) Ralstonia pickettii 12J 6286704 YP_001900242.1 CDS Rpic_2684 NC_010682.1 2795780 2796589 R catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase complement(2795780..2796589) Ralstonia pickettii 12J 6286705 YP_001900243.1 CDS Rpic_2685 NC_010682.1 2796646 2797977 R KEGG: rso:RSc2421 probable sulfate adenylyltransferase subunit 1 protein; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase large subunit complement(2796646..2797977) Ralstonia pickettii 12J 6286706 YP_001900244.1 CDS Rpic_2686 NC_010682.1 2797980 2798930 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2797980..2798930) Ralstonia pickettii 12J 6287601 YP_001900245.1 CDS Rpic_2687 NC_010682.1 2798941 2799744 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(2798941..2799744) Ralstonia pickettii 12J 6287602 YP_001900246.1 CDS Rpic_2688 NC_010682.1 2799741 2800289 R PFAM: conserved hypothetical protein; KEGG: rso:RSc2424 hypothetical protein; hypothetical protein complement(2799741..2800289) Ralstonia pickettii 12J 6287603 YP_001900247.1 CDS Rpic_2689 NC_010682.1 2800308 2801969 R PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: rso:RSc2425 probable sulfite reductase oxidoreductase protein; sulfite reductase complement(2800308..2801969) Ralstonia pickettii 12J 6287604 YP_001900248.1 CDS Rpic_2690 NC_010682.1 2802095 2802868 R PFAM: protein of unknown function DUF81; KEGG: rso:RSc2426 probable transmembrane protein; hypothetical protein complement(2802095..2802868) Ralstonia pickettii 12J 6286777 YP_001900249.1 CDS Rpic_2691 NC_010682.1 2803022 2803963 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2427 transcriptional regulator CysB-like protein; transcriptional regulator CysB-like protein 2803022..2803963 Ralstonia pickettii 12J 6286778 YP_001900250.1 CDS Rpic_2692 NC_010682.1 2804005 2805174 D KEGG: rso:RSc2428 probable amino acid-binding periplasmic (PBP) ABC transporter protein; putative amino acid-binding periplasmic (PBP) ABC transporter protein 2804005..2805174 Ralstonia pickettii 12J 6286779 YP_001900251.1 CDS Rpic_2693 NC_010682.1 2805216 2806100 D PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rso:RSc2429 probable oxidoreductase protein; 2-hydroxy-3-oxopropionate reductase 2805216..2806100 Ralstonia pickettii 12J 6286780 YP_001900252.1 CDS Rpic_2694 NC_010682.1 2806454 2808313 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2806454..2808313 Ralstonia pickettii 12J 6287537 YP_001900253.1 CDS dkgB NC_010682.1 2808396 2809202 R catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B complement(2808396..2809202) Ralstonia pickettii 12J 6287538 YP_001900254.1 CDS Rpic_2696 NC_010682.1 2809226 2810428 R PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_1134 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2809226..2810428) Ralstonia pickettii 12J 6287280 YP_001900255.1 CDS Rpic_2698 NC_010682.1 2810778 2811215 D PFAM: regulatory protein MarR; KEGG: rso:RSc2430 putative transcription regulator protein; MarR family transcriptional regulator 2810778..2811215 Ralstonia pickettii 12J 6287282 YP_001900256.1 CDS Rpic_2699 NC_010682.1 2811220 2813037 D PFAM: CBS domain containing protein; Chloride channel core; KEGG: rso:RSc2431 probable transmembrane protein; chloride channel protein 2811220..2813037 Ralstonia pickettii 12J 6287283 YP_001900257.1 CDS Rpic_2700 NC_010682.1 2813040 2814707 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rso:RSc2432 probable transmembrane protein; diguanylate cyclase complement(2813040..2814707) Ralstonia pickettii 12J 6287408 YP_001900258.1 CDS Rpic_2701 NC_010682.1 2814709 2815737 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: rso:RSc2433 putative oxidoreductase protein; NAD-dependent epimerase/dehydratase complement(2814709..2815737) Ralstonia pickettii 12J 6287409 YP_001900259.1 CDS Rpic_2702 NC_010682.1 2815793 2816842 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 2815793..2816842 Ralstonia pickettii 12J 6287410 YP_001900260.1 CDS argD NC_010682.1 2817114 2818301 D DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 2817114..2818301 Ralstonia pickettii 12J 6287411 YP_001900261.1 CDS Rpic_2704 NC_010682.1 2818383 2818859 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc2436 hypothetical protein; N-acetyltransferase GCN5 2818383..2818859 Ralstonia pickettii 12J 6288307 YP_001900262.1 CDS Rpic_2705 NC_010682.1 2818927 2819643 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2437 probable amino acid ATP-binding ABC transporter protein; ABC transporter-like protein complement(2818927..2819643) Ralstonia pickettii 12J 6288308 YP_001900263.1 CDS Rpic_2706 NC_010682.1 2819660 2820436 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2438 probable amino acid ATP-binding ABC transporter protein; ABC transporter-like protein complement(2819660..2820436) Ralstonia pickettii 12J 6288309 YP_001900264.1 CDS Rpic_2707 NC_010682.1 2820450 2821577 R PFAM: inner-membrane translocator; KEGG: rso:RSc2439 probable amino-acid transmembrane ABC transporter protein; inner-membrane translocator complement(2820450..2821577) Ralstonia pickettii 12J 6288310 YP_001900265.1 CDS Rpic_2708 NC_010682.1 2821591 2822526 R PFAM: inner-membrane translocator; KEGG: rso:RSc2440 putative amino-acid transmembrane ABC transporter protein; inner-membrane translocator complement(2821591..2822526) Ralstonia pickettii 12J 6286723 YP_001900266.1 CDS Rpic_2709 NC_010682.1 2822737 2823942 R PFAM: Extracellular ligand-binding receptor; KEGG: rme:Rmet_2867 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2822737..2823942) Ralstonia pickettii 12J 6286724 YP_001900267.1 CDS ispH NC_010682.1 2824396 2825379 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2824396..2825379) Ralstonia pickettii 12J 6286725 YP_001900268.1 CDS Rpic_2711 NC_010682.1 2825381 2825869 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rso:RSc2443 probable FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase protein; FKBP-type peptidylprolyl isomerase complement(2825381..2825869) Ralstonia pickettii 12J 6286726 YP_001900269.1 CDS radC NC_010682.1 2825989 2826663 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2825989..2826663 Ralstonia pickettii 12J 6289200 YP_001900270.1 CDS rpmB NC_010682.1 2826844 2827077 D required for 70S ribosome assembly; 50S ribosomal protein L28 2826844..2827077 Ralstonia pickettii 12J 6289201 YP_001900271.1 CDS rpmG NC_010682.1 2827091 2827261 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2827091..2827261 Ralstonia pickettii 12J 6289202 YP_001900272.1 CDS Rpic_2715 NC_010682.1 2827440 2829041 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2827440..2829041 Ralstonia pickettii 12J 6289203 YP_001900273.1 CDS Rpic_2716 NC_010682.1 2829051 2829950 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase complement(2829051..2829950) Ralstonia pickettii 12J 6289100 YP_001900274.1 CDS Rpic_2717 NC_010682.1 2829947 2831095 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(2829947..2831095) Ralstonia pickettii 12J 6289101 YP_001900275.1 CDS Rpic_2718 NC_010682.1 2831283 2832473 R PFAM: fatty acid desaturase; KEGG: rso:RSc2450 putative stearoyl-CoA desaturase oxidoreductase protein; fatty acid desaturase complement(2831283..2832473) Ralstonia pickettii 12J 6289102 YP_001900276.1 CDS Rpic_2719 NC_010682.1 2832847 2834220 R PFAM: MscS Mechanosensitive ion channel; KEGG: rso:RSc2451 hypothetical protein; mechanosensitive ion channel MscS complement(2832847..2834220) Ralstonia pickettii 12J 6289103 YP_001900277.1 CDS Rpic_2720 NC_010682.1 2834217 2834801 R KEGG: rso:RSc2452 putative endonuclease protein; putative endonuclease protein complement(2834217..2834801) Ralstonia pickettii 12J 6289053 YP_001900278.1 CDS Rpic_2721 NC_010682.1 2834798 2836195 R PFAM: Fmu (Sun) domain protein; KEGG: rso:RSc2453 hypothetical protein; Fmu (Sun) domain-containing protein complement(2834798..2836195) Ralstonia pickettii 12J 6289054 YP_001900279.1 CDS purN NC_010682.1 2836192 2836842 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(2836192..2836842) Ralstonia pickettii 12J 6289055 YP_001900280.1 CDS Rpic_2723 NC_010682.1 2837245 2837910 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rso:RSc2455 response regulator VSRC transcription regulator protein; two component LuxR family transcriptional regulator 2837245..2837910 Ralstonia pickettii 12J 6289056 YP_001900281.1 CDS Rpic_2724 NC_010682.1 2837977 2839872 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc2456 composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein; integral membrane sensor hybrid histidine kinase complement(2837977..2839872) Ralstonia pickettii 12J 6288805 YP_001900282.1 CDS Rpic_2725 NC_010682.1 2840030 2841028 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 2840030..2841028 Ralstonia pickettii 12J 6288806 YP_001900283.1 CDS ileS NC_010682.1 2841138 2844017 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2841138..2844017 Ralstonia pickettii 12J 6288807 YP_001900284.1 CDS lspA NC_010682.1 2844017 2844541 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2844017..2844541 Ralstonia pickettii 12J 6288808 YP_001900285.1 CDS Rpic_2728 NC_010682.1 2844549 2844926 D KEGG: sen:SACE_5646 alpha/beta hydrolase; alpha/beta hydrolase 2844549..2844926 Ralstonia pickettii 12J 6289604 YP_001900286.1 CDS Rpic_2729 NC_010682.1 2844930 2845508 R PFAM: protein of unknown function DUF218; KEGG: rso:RSc2460 putative transmembrane protein; hypothetical protein complement(2844930..2845508) Ralstonia pickettii 12J 6289605 YP_001900287.1 CDS Rpic_2730 NC_010682.1 2845658 2846863 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2845658..2846863 Ralstonia pickettii 12J 6289606 YP_001900288.1 CDS Rpic_2731 NC_010682.1 2846860 2847906 D PFAM: Luciferase-like monooxygenase; KEGG: rso:RSc2462 hypothetical protein; luciferase-like monooxygenase 2846860..2847906 Ralstonia pickettii 12J 6289607 YP_001900289.1 CDS dut NC_010682.1 2847903 2848349 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2847903..2848349 Ralstonia pickettii 12J 6286251 YP_001900290.1 CDS Rpic_2733 NC_010682.1 2848415 2850703 R KEGG: rso:RSc2464 probable ATP-dependent protease (ATP-binding specificity subunit) protein; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA complement(2848415..2850703) Ralstonia pickettii 12J 6286252 YP_001900291.1 CDS clpS NC_010682.1 2850700 2851026 R involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS complement(2850700..2851026) Ralstonia pickettii 12J 6286253 YP_001900292.1 CDS Rpic_2735 NC_010682.1 2851604 2851807 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rso:RSc2466 probable cold shock-like CspD transcription regulator protein; cold-shock DNA-binding domain-containing protein 2851604..2851807 Ralstonia pickettii 12J 6286254 YP_001900293.1 CDS Rpic_2736 NC_010682.1 2851993 2852448 D KEGG: bmu:Bmul_1501 hypothetical protein; hypothetical protein 2851993..2852448 Ralstonia pickettii 12J 6288824 YP_001900294.1 CDS Rpic_2737 NC_010682.1 2852527 2853147 D KEGG: rso:RSc2467 probable transmembrane protein; hypothetical protein 2852527..2853147 Ralstonia pickettii 12J 6288825 YP_001900295.1 CDS Rpic_2738 NC_010682.1 2853504 2853698 D hypothetical protein 2853504..2853698 Ralstonia pickettii 12J 6288826 YP_001900296.1 CDS Rpic_2739 NC_010682.1 2854134 2854862 D KEGG: rso:RSc2472 putative transmembrane protein; hypothetical protein 2854134..2854862 Ralstonia pickettii 12J 6288827 YP_001900297.1 CDS Rpic_2741 NC_010682.1 2855779 2856303 R hypothetical protein complement(2855779..2856303) Ralstonia pickettii 12J 6288332 YP_001900298.1 CDS Rpic_2742 NC_010682.1 2856600 2857139 D KEGG: shm:Shewmr7_0699 hypothetical protein; hypothetical protein 2856600..2857139 Ralstonia pickettii 12J 6288333 YP_001900299.1 CDS Rpic_2743 NC_010682.1 2857136 2857654 R KEGG: swi:Swit_3488 glucan biosynthesis protein G; hypothetical protein complement(2857136..2857654) Ralstonia pickettii 12J 6288334 YP_001900300.1 CDS Rpic_2744 NC_010682.1 2857800 2857970 R KEGG: ppd:Ppro_3130 hypothetical protein; hypothetical protein complement(2857800..2857970) Ralstonia pickettii 12J 6286573 YP_001900301.1 CDS Rpic_2745 NC_010682.1 2858263 2859762 R KEGG: bvi:Bcep1808_4560 hypothetical protein; hypothetical protein complement(2858263..2859762) Ralstonia pickettii 12J 6286574 YP_001900302.1 CDS Rpic_2746 NC_010682.1 2859802 2860353 R KEGG: hpa:HPAG1_0502 cag pathogenicity island protein Y; hypothetical protein complement(2859802..2860353) Ralstonia pickettii 12J 6286575 YP_001900303.1 CDS Rpic_2747 NC_010682.1 2860492 2860953 R KEGG: azo:azo1867 hypothetical protein; hypothetical protein complement(2860492..2860953) Ralstonia pickettii 12J 6286576 YP_001900304.1 CDS Rpic_2748 NC_010682.1 2860950 2861285 R KEGG: hso:HS_0523 hypothetical protein; hypothetical protein complement(2860950..2861285) Ralstonia pickettii 12J 6287963 YP_001900305.1 CDS Rpic_2749 NC_010682.1 2861297 2861500 R PFAM: Prophage CP4-57 regulatory; KEGG: bvi:Bcep1808_5778 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA complement(2861297..2861500) Ralstonia pickettii 12J 6287964 YP_001900306.1 CDS Rpic_2750 NC_010682.1 2861592 2862380 R hypothetical protein complement(2861592..2862380) Ralstonia pickettii 12J 6287965 YP_001900307.1 CDS Rpic_2751 NC_010682.1 2862478 2863725 R PFAM: integrase family protein; KEGG: rso:RSc2489 putative integrase protein; integrase family protein complement(2862478..2863725) Ralstonia pickettii 12J 6287966 YP_001900308.1 CDS Rpic_2752 NC_010682.1 2863905 2865155 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(2863905..2865155) Ralstonia pickettii 12J 6286609 YP_001900309.1 CDS Rpic_2753 NC_010682.1 2865416 2866030 R hypothetical protein complement(2865416..2866030) Ralstonia pickettii 12J 6286610 YP_001900310.1 CDS Rpic_2754 NC_010682.1 2866177 2866389 D KEGG: rso:RSc2491 hypothetical signal peptide protein; hypothetical protein 2866177..2866389 Ralstonia pickettii 12J 6286611 YP_001900311.1 CDS Rpic_2755 NC_010682.1 2866576 2868090 D PFAM: metallophosphoesterase; KEGG: rso:RSc2492 hypothetical protein; metallophosphoesterase 2866576..2868090 Ralstonia pickettii 12J 6286612 YP_001900312.1 CDS Rpic_2756 NC_010682.1 2868087 2869427 D KEGG: rso:RSc2493 probable signal peptide protein; putative signal peptide protein 2868087..2869427 Ralstonia pickettii 12J 6288120 YP_001900313.1 CDS Rpic_2757 NC_010682.1 2869518 2869979 D PFAM: protein of unknown function DUF192; KEGG: rso:RSc2494 hypothetical signal peptide protein; hypothetical protein 2869518..2869979 Ralstonia pickettii 12J 6288121 YP_001900314.1 CDS Rpic_2758 NC_010682.1 2870018 2870983 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc2495 hypothetical hydrolase protein; beta-lactamase domain-containing protein 2870018..2870983 Ralstonia pickettii 12J 6288122 YP_001900315.1 CDS Rpic_2759 NC_010682.1 2870980 2871447 R KEGG: rso:RSc2496 hypothetical signal peptide protein; hypothetical protein complement(2870980..2871447) Ralstonia pickettii 12J 6288123 YP_001900316.1 CDS Rpic_2760 NC_010682.1 2871483 2872448 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2497 probable transcription regulator protein; LysR family transcriptional regulator complement(2871483..2872448) Ralstonia pickettii 12J 6286942 YP_001900317.1 CDS Rpic_2761 NC_010682.1 2872513 2873421 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2498 probable transcription regulator protein; LysR family transcriptional regulator complement(2872513..2873421) Ralstonia pickettii 12J 6286943 YP_001900318.1 CDS Rpic_2762 NC_010682.1 2873489 2874547 D KEGG: pna:Pnap_1393 ISXo7 transposase; ISXo7 transposase 2873489..2874547 Ralstonia pickettii 12J 6286944 YP_001900319.1 CDS Rpic_2763 NC_010682.1 2874615 2876171 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2499 putative multidrug resistance protein; major facilitator superfamily protein 2874615..2876171 Ralstonia pickettii 12J 6286945 YP_001900320.1 CDS Rpic_2764 NC_010682.1 2876179 2876589 R PFAM: DoxX family protein; KEGG: rso:RSc2500 probable transmembrane protein; DoxX family protein complement(2876179..2876589) Ralstonia pickettii 12J 6288374 YP_001900321.1 CDS Rpic_2765 NC_010682.1 2876625 2877509 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A2778 transcriptional regulator, LysR-family; LysR family transcriptional regulator complement(2876625..2877509) Ralstonia pickettii 12J 6288375 YP_001900322.1 CDS Rpic_2766 NC_010682.1 2877634 2879262 D PFAM: gamma-glutamyltranspeptidase; KEGG: rso:RSc2501 putative gamma-glutamyltranspeptidase protein; gamma-glutamyltransferase 2877634..2879262 Ralstonia pickettii 12J 6288376 YP_001900323.1 CDS Rpic_2767 NC_010682.1 2879364 2880680 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0645 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein 2879364..2880680 Ralstonia pickettii 12J 6288377 YP_001900324.1 CDS Rpic_2768 NC_010682.1 2880798 2881157 D KEGG: reh:H16_B0892 hypothetical protein; hypothetical protein 2880798..2881157 Ralstonia pickettii 12J 6289663 YP_001900325.1 CDS Rpic_2769 NC_010682.1 2881166 2882056 D TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B0029 putative dihydrodipicolinate synthase; dihydrodipicolinate synthase 2881166..2882056 Ralstonia pickettii 12J 6289664 YP_001900326.1 CDS Rpic_2770 NC_010682.1 2882067 2882657 R KEGG: rso:RSc2502 probable transmembrane protein; hypothetical protein complement(2882067..2882657) Ralstonia pickettii 12J 6289665 YP_001900327.1 CDS Rpic_2771 NC_010682.1 2882976 2883863 D PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: rso:RSc2503 hypothetical protein; hypothetical protein 2882976..2883863 Ralstonia pickettii 12J 6289666 YP_001900328.1 CDS Rpic_2772 NC_010682.1 2883871 2884617 R Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase complement(2883871..2884617) Ralstonia pickettii 12J 6286428 YP_001900329.1 CDS Rpic_2773 NC_010682.1 2884756 2886231 D PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: rso:RSc2505 putative transcription regulator protein; AraC family transcriptional regulator 2884756..2886231 Ralstonia pickettii 12J 6286429 YP_001900330.1 CDS Rpic_2774 NC_010682.1 2886245 2886793 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rso:RSc2506 probable methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2886245..2886793 Ralstonia pickettii 12J 6286430 YP_001900331.1 CDS Rpic_2775 NC_010682.1 2886853 2887785 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc2507 probable transmembrane protein; hypothetical protein 2886853..2887785 Ralstonia pickettii 12J 6286431 YP_001900332.1 CDS Rpic_2776 NC_010682.1 2888336 2889646 D PFAM: HipA domain protein; KEGG: rso:RSc2508 hypothetical protein; HipA domain-containing protein 2888336..2889646 Ralstonia pickettii 12J 6286641 YP_001900333.1 CDS Rpic_2777 NC_010682.1 2889675 2889950 R KEGG: rso:RSc2509 hypothetical protein; hypothetical protein complement(2889675..2889950) Ralstonia pickettii 12J 6286642 YP_001900334.1 CDS Rpic_2778 NC_010682.1 2890185 2891600 D KEGG: ccr:CC_2809 peptidase, M20/M25/M40 family; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2890185..2891600 Ralstonia pickettii 12J 6286643 YP_001900335.1 CDS Rpic_2779 NC_010682.1 2891675 2892487 D PFAM: extracellular solute-binding protein family 3; KEGG: rso:RSc2512 putative cyclohexadienyl dehydratase precursor signal peptide protein; arogenate dehydratase 2891675..2892487 Ralstonia pickettii 12J 6286644 YP_001900336.1 CDS Rpic_2780 NC_010682.1 2892494 2892703 R KEGG: ecv:APECO1_O1R83 TetA; TetA prtoein complement(2892494..2892703) Ralstonia pickettii 12J 6286385 YP_001900337.1 CDS Rpic_2781 NC_010682.1 2892728 2893534 R KEGG: rso:RSc2513 hypothetical protein; hypothetical protein complement(2892728..2893534) Ralstonia pickettii 12J 6286386 YP_001900338.1 CDS Rpic_2782 NC_010682.1 2893941 2894213 D KEGG: rso:RSc2514 hypothetical signal peptide protein; hypothetical protein 2893941..2894213 Ralstonia pickettii 12J 6286387 YP_001900339.1 CDS Rpic_2783 NC_010682.1 2894484 2895695 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rso:RSc2515 hypothetical protein; metal dependent phosphohydrolase 2894484..2895695 Ralstonia pickettii 12J 6286388 YP_001900340.1 CDS Rpic_2784 NC_010682.1 2895719 2897233 D PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rso:RSc2516 putative lipoprotein transmembrane; glycine betaine ABC transporter substrate-binding protein 2895719..2897233 Ralstonia pickettii 12J 6286203 YP_001900341.1 CDS Rpic_2785 NC_010682.1 2897298 2898065 D PFAM: protein of unknown function DUF81; KEGG: rso:RSc2517 hypothetical protein; hypothetical protein 2897298..2898065 Ralstonia pickettii 12J 6286204 YP_001900342.1 CDS Rpic_2786 NC_010682.1 2898234 2898677 D hypothetical protein 2898234..2898677 Ralstonia pickettii 12J 6286205 YP_001900343.1 CDS Rpic_2787 NC_010682.1 2898719 2899546 R PFAM: Integrase catalytic region; KEGG: pol:Bpro_3089 integrase, catalytic region; Integrase catalytic subunit complement(2898719..2899546) Ralstonia pickettii 12J 6286206 YP_001900344.1 CDS Rpic_2788 NC_010682.1 2899549 2899947 R KEGG: pol:Bpro_1225 ISPsy11, transposase OrfA; ISPsy11, transposase OrfA complement(2899549..2899947) Ralstonia pickettii 12J 6286482 YP_001900345.1 CDS Rpic_2789 NC_010682.1 2900063 2901463 R PFAM: Citrate transporter; KEGG: rso:RSc2518 hypothetical protein; citrate transporter complement(2900063..2901463) Ralstonia pickettii 12J 6286483 YP_001900346.1 CDS Rpic_2790 NC_010682.1 2901616 2901990 R KEGG: rso:RSc2519 hypothetical protein; hypothetical protein complement(2901616..2901990) Ralstonia pickettii 12J 6286484 YP_001900347.1 CDS Rpic_2791 NC_010682.1 2902171 2903502 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_3403 major facilitator superfamily MFS_1; major facilitator superfamily protein 2902171..2903502 Ralstonia pickettii 12J 6286485 YP_001900348.1 CDS Rpic_2792 NC_010682.1 2903553 2904305 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: rso:RSc2520 hypothetical protein; NAD-dependent epimerase/dehydratase complement(2903553..2904305) Ralstonia pickettii 12J 6287416 YP_001900349.1 CDS Rpic_2793 NC_010682.1 2904617 2904901 D PFAM: histone family protein DNA-binding protein; KEGG: rso:RSc2521 probable DNA-binding protein HU-beta (NS1) (HU-1); histone family protein DNA-binding protein 2904617..2904901 Ralstonia pickettii 12J 6287417 YP_001900350.1 CDS Rpic_2794 NC_010682.1 2905005 2905586 R PFAM: protein of unknown function DUF886; KEGG: rso:RSc2522 hypothetical protein; hypothetical protein complement(2905005..2905586) Ralstonia pickettii 12J 6287418 YP_001900351.1 CDS Rpic_2795 NC_010682.1 2905583 2906530 R catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase complement(2905583..2906530) Ralstonia pickettii 12J 6287419 YP_001900352.1 CDS Rpic_2796 NC_010682.1 2906527 2907327 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A0045 ABC-type transporter, ATPase component: PAAT family; ABC transporter-like protein complement(2906527..2907327) Ralstonia pickettii 12J 6286665 YP_001900353.1 CDS Rpic_2797 NC_010682.1 2907324 2907992 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_A0046 ABC-type transporter, permease component: PAAT family; polar amino acid ABC transporter inner membrane subunit complement(2907324..2907992) Ralstonia pickettii 12J 6286666 YP_001900354.1 CDS Rpic_2798 NC_010682.1 2908008 2908772 R PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: reu:Reut_A1594 extracellular solute-binding protein, family 3; family 3 extracellular solute-binding protein complement(2908008..2908772) Ralstonia pickettii 12J 6286667 YP_001900355.1 CDS Rpic_2799 NC_010682.1 2908835 2909605 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reh:H16_A0048 transcriptional regulator, IclR-family; IclR family transcriptional regulator complement(2908835..2909605) Ralstonia pickettii 12J 6286668 YP_001900356.1 CDS Rpic_2800 NC_010682.1 2909715 2910245 R KEGG: rso:RSc1455 probable proline-rich protein; hypothetical protein complement(2909715..2910245) Ralstonia pickettii 12J 6289691 YP_001900357.1 CDS Rpic_2801 NC_010682.1 2910498 2911043 D PFAM: protein of unknown function DUF1486; KEGG: bte:BTH_I2604 hypothetical protein; hypothetical protein 2910498..2911043 Ralstonia pickettii 12J 6289692 YP_001900358.1 CDS Rpic_2802 NC_010682.1 2911190 2912017 D KEGG: rso:RSc2523 putative transmembrane protein; hypothetical protein 2911190..2912017 Ralstonia pickettii 12J 6289693 YP_001900359.1 CDS Rpic_2803 NC_010682.1 2912368 2913069 R PFAM: manganese and iron superoxide dismutase; KEGG: rso:RSc2526 probable superoxide dismutase [Fe] protein; Superoxide dismutase complement(2912368..2913069) Ralstonia pickettii 12J 6289694 YP_001900360.1 CDS xseA NC_010682.1 2913094 2914503 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(2913094..2914503) Ralstonia pickettii 12J 6288417 YP_001900361.1 CDS Rpic_2805 NC_010682.1 2915580 2916200 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: rso:RSc2528 probable biopolymer transport ExbB-like transmembrane protein; MotA/TolQ/ExbB proton channel 2915580..2916200 Ralstonia pickettii 12J 6288418 YP_001900362.1 CDS Rpic_2806 NC_010682.1 2916229 2916657 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rso:RSc2529 probable biopolymer transport ExbD-related transmembrane protein; biopolymer transport protein ExbD/TolR 2916229..2916657 Ralstonia pickettii 12J 6288419 YP_001900363.1 CDS Rpic_2807 NC_010682.1 2916689 2917738 D Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2916689..2917738 Ralstonia pickettii 12J 6288420 YP_001900364.1 CDS Rpic_2808 NC_010682.1 2917808 2917996 D PFAM: protein of unknown function DUF343; KEGG: rso:RSc2531 hypothetical protein; hypothetical protein 2917808..2917996 Ralstonia pickettii 12J 6286069 YP_001900365.1 CDS Rpic_2809 NC_010682.1 2918013 2918819 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2918013..2918819 Ralstonia pickettii 12J 6286070 YP_001900366.1 CDS adk NC_010682.1 2919165 2919833 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2919165..2919833 Ralstonia pickettii 12J 6286071 YP_001900367.1 CDS Rpic_2811 NC_010682.1 2919993 2920751 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc2534 probable 3-hydroxyacyl-CoA dehydrogenase type II oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2919993..2920751 Ralstonia pickettii 12J 6286072 YP_001900368.1 CDS Rpic_2812 NC_010682.1 2920769 2921662 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2537 probable transcription regulator transcription regulator protein; LysR family transcriptional regulator complement(2920769..2921662) Ralstonia pickettii 12J 6286344 YP_001900369.1 CDS Rpic_2813 NC_010682.1 2921782 2922813 D PFAM: Bile acid:sodium symporter; KEGG: rso:RSc2538 probable lipoprotein transmembrane; bile acid:sodium symporter 2921782..2922813 Ralstonia pickettii 12J 6286345 YP_001900370.1 CDS Rpic_2814 NC_010682.1 2922814 2923359 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A0957 putative acetyltransferase; N-acetyltransferase GCN5 complement(2922814..2923359) Ralstonia pickettii 12J 6286346 YP_001900371.1 CDS Rpic_2815 NC_010682.1 2923363 2924883 R PFAM: cell wall hydrolase/autolysin; KEGG: rso:RSc2539 probable N-acetylmuramoyl-L-alanine amidase AmiC precursor protein; N-acetylmuramoyl-L-alanine amidase complement(2923363..2924883) Ralstonia pickettii 12J 6286347 YP_001900372.1 CDS Rpic_2816 NC_010682.1 2924877 2925455 R PFAM: protein of unknown function UPF0079; KEGG: rso:RSc2540 hypothetical protein; hypothetical protein complement(2924877..2925455) Ralstonia pickettii 12J 6289798 YP_001900373.1 CDS Rpic_2817 NC_010682.1 2925472 2926629 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: rso:RSc2541 putative iron-sulfur 4Fe-4S ferredoxin protein; iron-sulfur cluster binding protein 2925472..2926629 Ralstonia pickettii 12J 6289799 YP_001900374.1 CDS Rpic_2818 NC_010682.1 2926954 2927538 D KEGG: rso:RSc2542 putative lipoprotein transmembrane; putative transmembrane lipoprotein 2926954..2927538 Ralstonia pickettii 12J 6289800 YP_001900375.1 CDS Rpic_2820 NC_010682.1 2928701 2929177 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rso:RSc2543 probable methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2928701..2929177 Ralstonia pickettii 12J 6289790 YP_001900376.1 CDS xerD NC_010682.1 2929174 2930118 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 2929174..2930118 Ralstonia pickettii 12J 6289791 YP_001900377.1 CDS Rpic_2822 NC_010682.1 2930141 2930632 D TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rso:RSc2545 hypothetical protein; ybaK/ebsC protein 2930141..2930632 Ralstonia pickettii 12J 6289792 YP_001900378.1 CDS Rpic_2823 NC_010682.1 2930703 2931326 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 2930703..2931326 Ralstonia pickettii 12J 6289793 YP_001900379.1 CDS Rpic_2824 NC_010682.1 2931323 2932339 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_2101 probable transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2931323..2932339) Ralstonia pickettii 12J 6289171 YP_001900380.1 CDS Rpic_2825 NC_010682.1 2932500 2934887 D PFAM: peptidase S45 penicillin amidase; KEGG: rso:RSc2547 probable aculeacin A acylase transmembrane protein; peptidase S45 penicillin amidase 2932500..2934887 Ralstonia pickettii 12J 6289172 YP_001900381.1 CDS Rpic_2826 NC_010682.1 2934954 2935439 R putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein complement(2934954..2935439) Ralstonia pickettii 12J 6289173 YP_001900382.1 CDS murB NC_010682.1 2935546 2936574 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2935546..2936574 Ralstonia pickettii 12J 6289174 YP_001900383.1 CDS Rpic_2828 NC_010682.1 2936724 2937041 D PFAM: protein of unknown function DUF1255; KEGG: rso:RSc2552 hypothetical protein; hypothetical protein 2936724..2937041 Ralstonia pickettii 12J 6287500 YP_001900384.1 CDS Rpic_2829 NC_010682.1 2937194 2938531 D catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 2937194..2938531 Ralstonia pickettii 12J 6287501 YP_001900385.1 CDS Rpic_2830 NC_010682.1 2938618 2939544 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(2938618..2939544) Ralstonia pickettii 12J 6287502 YP_001900386.1 CDS Rpic_2831 NC_010682.1 2939913 2940236 D KEGG: rso:RSc2555 hypothetical protein; hypothetical protein 2939913..2940236 Ralstonia pickettii 12J 6287503 YP_001900387.1 CDS rpsT NC_010682.1 2940381 2940647 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(2940381..2940647) Ralstonia pickettii 12J 6287241 YP_001900388.1 CDS Rpic_2833 NC_010682.1 2940925 2942517 D TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: rso:RSc2557 probable MVIN_ECOLI homolog transmembrane protein; integral membrane protein MviN 2940925..2942517 Ralstonia pickettii 12J 6287242 YP_001900389.1 CDS Rpic_2834 NC_010682.1 2942517 2943362 D KEGG: rso:RSc2558 hypothetical protein; hypothetical protein 2942517..2943362 Ralstonia pickettii 12J 6287243 YP_001900390.1 CDS Rpic_2835 NC_010682.1 2943366 2944013 R PFAM: SNARE associated Golgi protein; KEGG: rso:RSc2559 probable DedA DSG-1 protein transmembrane; hypothetical protein complement(2943366..2944013) Ralstonia pickettii 12J 6287244 YP_001900391.1 CDS mutL NC_010682.1 2944103 2946046 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 2944103..2946046 Ralstonia pickettii 12J 6288132 YP_001900392.1 CDS miaA NC_010682.1 2946052 2947029 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2946052..2947029 Ralstonia pickettii 12J 6288133 YP_001900393.1 CDS Rpic_2838 NC_010682.1 2947026 2947556 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc2565 putative acetyltransferase protein; N-acetyltransferase GCN5 2947026..2947556 Ralstonia pickettii 12J 6288134 YP_001900394.1 CDS Rpic_2839 NC_010682.1 2947637 2948377 D KEGG: rso:RSc2567 hypothetical protein; hypothetical protein 2947637..2948377 Ralstonia pickettii 12J 6288135 YP_001900395.1 CDS Rpic_2840 NC_010682.1 2948388 2949044 D PFAM: 2OG-Fe(II) oxygenase; KEGG: rso:RSc2568 probable alkylated DNA repair protein; 2OG-Fe(II) oxygenase 2948388..2949044 Ralstonia pickettii 12J 6288596 YP_001900396.1 CDS Rpic_2841 NC_010682.1 2949060 2949710 D PFAM: HhH-GPD family protein; KEGG: rso:RSc2569 probable DNA-3-methyladenine glycosylase protein; DNA-3-methyladenine glycosylase II 2949060..2949710 Ralstonia pickettii 12J 6288597 YP_001900397.1 CDS Rpic_2842 NC_010682.1 2949766 2950032 D TIGRFAM: periplasmic nitrate reductase, NapE protein; PFAM: periplasmic nitrate reductase NapE; KEGG: rme:Rmet_4065 periplasmic nitrate reductase NapE; periplasmic nitrate reductase, NapE protein 2949766..2950032 Ralstonia pickettii 12J 6288598 YP_001900398.1 CDS Rpic_2843 NC_010682.1 2950121 2950465 D PFAM: NapD family protein; KEGG: reu:Reut_B4762 NapD; NapD family protein 2950121..2950465 Ralstonia pickettii 12J 6288599 YP_001900399.1 CDS Rpic_2844 NC_010682.1 2950437 2952953 D periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 2950437..2952953 Ralstonia pickettii 12J 6289539 YP_001900400.1 CDS Rpic_2845 NC_010682.1 2952994 2953497 D PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: reu:Reut_B4764 nitrate reductase cytochrome c-type subunit (NapB); nitrate reductase cytochrome c-type subunit (NapB) 2952994..2953497 Ralstonia pickettii 12J 6289540 YP_001900401.1 CDS Rpic_2846 NC_010682.1 2953510 2954097 D TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; KEGG: rme:Rmet_4061 periplasmic nitrate reductase C-type cytochrome, NapC/NirT; periplasmic nitrate (or nitrite) reductase c-type cytochrome 2953510..2954097 Ralstonia pickettii 12J 6289541 YP_001900402.1 CDS Rpic_2847 NC_010682.1 2954150 2954782 D KEGG: reu:Reut_B4766 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA 2954150..2954782 Ralstonia pickettii 12J 6289542 YP_001900403.1 CDS Rpic_2848 NC_010682.1 2954779 2955447 D TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: reu:Reut_B4767 cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB 2954779..2955447 Ralstonia pickettii 12J 6288963 YP_001900404.1 CDS Rpic_2849 NC_010682.1 2955452 2956240 D TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: reu:Reut_B4768 cytochrome c-type biogenesis protein CcmC; heme exporter protein CcmC 2955452..2956240 Ralstonia pickettii 12J 6288964 YP_001900405.1 CDS Rpic_2850 NC_010682.1 2956237 2956389 D hypothetical protein 2956237..2956389 Ralstonia pickettii 12J 6288965 YP_001900406.1 CDS Rpic_2851 NC_010682.1 2956386 2956856 D CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 2956386..2956856 Ralstonia pickettii 12J 6288966 YP_001900407.1 CDS Rpic_2852 NC_010682.1 2956853 2958871 D TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: reu:Reut_B4770 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 2956853..2958871 Ralstonia pickettii 12J 6286930 YP_001900408.1 CDS Rpic_2853 NC_010682.1 2958868 2959410 D TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: reu:Reut_B4771 periplasmic protein thiol:disulfide oxidoreductase DsbE; protein thiol/disulfide oxidoreductase DsbE 2958868..2959410 Ralstonia pickettii 12J 6286931 YP_001900409.1 CDS Rpic_2854 NC_010682.1 2959403 2959873 D PFAM: cytochrome C biogenesis protein; KEGG: reu:Reut_B4772 cytochrome c biogenesis protein; cytochrome C biogenesis protein 2959403..2959873 Ralstonia pickettii 12J 6286932 YP_001900410.1 CDS Rpic_2855 NC_010682.1 2959870 2960769 D KEGG: reu:Reut_B4773 TPR repeat; TIGRFAM: cytochrome c-type biogenesis protein CcmI; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; cytochrome c-type biogenesis protein CcmI 2959870..2960769 Ralstonia pickettii 12J 6286933 YP_001900411.1 CDS Rpic_2856 NC_010682.1 2960865 2961950 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rso:RSc2570 probable ADA regulatory of adaptative response contains: methylated-DNA--protein-cysteine methyltransferase O-6-methylguanine-DNA transcription regulator; AraC family transcriptional regulator 2960865..2961950 Ralstonia pickettii 12J 6288111 YP_001900412.1 CDS Rpic_2857 NC_010682.1 2962193 2962699 D KEGG: rso:RSc2572 probable lipoprotein; putative lipoprotein 2962193..2962699 Ralstonia pickettii 12J 6288112 YP_001900413.1 CDS Rpic_2858 NC_010682.1 2962773 2963828 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(2962773..2963828) Ralstonia pickettii 12J 6288113 YP_001900414.1 CDS Rpic_2859 NC_010682.1 2963992 2965062 D PFAM: protein of unknown function UPF0118; KEGG: rso:RSc2624 probable permease transmembrane transport protein; hypothetical protein 2963992..2965062 Ralstonia pickettii 12J 6288114 YP_001900415.1 CDS Rpic_2860 NC_010682.1 2965111 2965812 D KEGG: rso:RSc2625 hypothetical protein; DnaA regulatory inactivator Hda 2965111..2965812 Ralstonia pickettii 12J 6287633 YP_001900416.1 CDS Rpic_2861 NC_010682.1 2965865 2966539 D TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: rso:RSc2626 putative hydrolase protein; HAD-superfamily hydrolase 2965865..2966539 Ralstonia pickettii 12J 6287634 YP_001900417.1 CDS Rpic_2862 NC_010682.1 2966552 2968117 D KEGG: rso:RSc2627 probable polynucleotide adenylyltransferase protein; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 2966552..2968117 Ralstonia pickettii 12J 6287635 YP_001900418.1 CDS Rpic_2863 NC_010682.1 2968114 2968629 D KEGG: rso:RSc2628 probable 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase protein; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2968114..2968629 Ralstonia pickettii 12J 6287636 YP_001900419.1 CDS Rpic_2864 NC_010682.1 2968659 2969303 D KEGG: rso:RSc2629 putative deoxyguanosine kinase (dGuo kinase) (DGK) protein; putative deoxyguanosine kinase 2968659..2969303 Ralstonia pickettii 12J 6286121 YP_001900420.1 CDS panB NC_010682.1 2969360 2970178 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2969360..2970178 Ralstonia pickettii 12J 6286122 YP_001900421.1 CDS Rpic_2866 NC_010682.1 2970190 2970897 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2631 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2970190..2970897 Ralstonia pickettii 12J 6286123 YP_001900422.1 CDS Rpic_2867 NC_010682.1 2970894 2971592 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2632 probable ATP-binding ABC transporter protein; ABC transporter-like protein 2970894..2971592 Ralstonia pickettii 12J 6286124 YP_001900423.1 CDS Rpic_2868 NC_010682.1 2971536 2973434 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; KEGG: rso:RSc2633 putative para-aminobenzoate synthetase component I protein; para-aminobenzoate synthase subunit I complement(2971536..2973434) Ralstonia pickettii 12J 6289246 YP_001900424.1 CDS Rpic_2869 NC_010682.1 2973584 2974732 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(2973584..2974732) Ralstonia pickettii 12J 6289247 YP_001900425.1 CDS dnaK NC_010682.1 2974867 2976819 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(2974867..2976819) Ralstonia pickettii 12J 6289248 YP_001900426.1 CDS Rpic_2871 NC_010682.1 2977084 2978379 D KEGG: reh:H16_A1139 outer membrane phospholipase A; outer membrane phospholipase A 2977084..2978379 Ralstonia pickettii 12J 6289249 YP_001900427.1 CDS Rpic_2872 NC_010682.1 2978392 2978799 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: rso:RSc2636 putative regulator of nucleoside diphosphate kinase transcription regulator protein; GreA/GreB family elongation factor complement(2978392..2978799) Ralstonia pickettii 12J 6287077 YP_001900428.1 CDS Rpic_2873 NC_010682.1 2979111 2979536 R KEGG: rso:RSc2638 putative thioredoxin protein; putative thioredoxin protein complement(2979111..2979536) Ralstonia pickettii 12J 6287078 YP_001900429.1 CDS Rpic_2874 NC_010682.1 2979550 2980197 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(2979550..2980197) Ralstonia pickettii 12J 6287079 YP_001900430.1 CDS Rpic_2875 NC_010682.1 2980460 2980657 D KEGG: rso:RSc2641 putative transmembrane protein; hypothetical protein 2980460..2980657 Ralstonia pickettii 12J 6287080 YP_001900431.1 CDS Rpic_2876 NC_010682.1 2980679 2981077 R PFAM: RNA-binding S4 domain protein; KEGG: rso:RSc2642 putative heat shock protein 15; RNA-binding S4 domain-containing protein complement(2980679..2981077) Ralstonia pickettii 12J 6287772 YP_001900432.1 CDS hemH NC_010682.1 2981074 2982189 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(2981074..2982189) Ralstonia pickettii 12J 6287773 YP_001900433.1 CDS Rpic_2878 NC_010682.1 2982246 2983481 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(2982246..2983481) Ralstonia pickettii 12J 6287774 YP_001900434.1 CDS Rpic_2879 NC_010682.1 2983474 2984451 R catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase complement(2983474..2984451) Ralstonia pickettii 12J 6287775 YP_001900435.1 CDS Rpic_2880 NC_010682.1 2984454 2986010 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(2984454..2986010) Ralstonia pickettii 12J 6287225 YP_001900436.1 CDS Rpic_2881 NC_010682.1 2986036 2987754 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(2986036..2987754) Ralstonia pickettii 12J 6287226 YP_001900437.1 CDS Rpic_2882 NC_010682.1 2987909 2988622 D TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: rso:RSc2648 probable histidine utilization repressor transcription regulator protein; transcriptional regulator, histidine utilization repressor, GntR family 2987909..2988622 Ralstonia pickettii 12J 6287227 YP_001900438.1 CDS Rpic_2883 NC_010682.1 2988630 2989499 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A4207 ABC taurine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2988630..2989499) Ralstonia pickettii 12J 6287228 YP_001900439.1 CDS Rpic_2884 NC_010682.1 2989496 2990287 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6226 ABC taurine transporter, ATPase subunit; ABC transporter-like protein complement(2989496..2990287) Ralstonia pickettii 12J 6288876 YP_001900440.1 CDS Rpic_2885 NC_010682.1 2990284 2991348 R KEGG: bmu:Bmul_0419 taurine ABC transporter, periplasmic binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; taurine ABC transporter periplasmic binding protein complement(2990284..2991348) Ralstonia pickettii 12J 6288877 YP_001900441.1 CDS hrcA NC_010682.1 2991474 2992532 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(2991474..2992532) Ralstonia pickettii 12J 6288878 YP_001900442.1 CDS ppnK NC_010682.1 2992644 2993582 D catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 2992644..2993582 Ralstonia pickettii 12J 6288879 YP_001900443.1 CDS Rpic_2888 NC_010682.1 2993593 2995299 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rso:RSc2651 probable DNA repair protein; DNA repair protein RecN 2993593..2995299 Ralstonia pickettii 12J 6288521 YP_001900444.1 CDS Rpic_2889 NC_010682.1 2995393 2995851 D KEGG: rso:RSc2652 probable lipoprotein; putative lipoprotein 2995393..2995851 Ralstonia pickettii 12J 6288522 YP_001900445.1 CDS Rpic_2890 NC_010682.1 2996116 2997759 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rso:RSc2653 putative extracellular protease signal peptide protein; peptidase S8/S53 subtilisin kexin sedolisin 2996116..2997759 Ralstonia pickettii 12J 6288523 YP_001900446.1 CDS Rpic_2891 NC_010682.1 2997984 2999930 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rso:RSc2654 probable serine protease protein; peptidase S8/S53 subtilisin kexin sedolisin 2997984..2999930 Ralstonia pickettii 12J 6288524 YP_001900447.1 CDS Rpic_2892 NC_010682.1 3000019 3000633 R KEGG: rso:RSc2655 probable transmembrane protein; hypothetical protein complement(3000019..3000633) Ralstonia pickettii 12J 6286906 YP_001900448.1 CDS Rpic_2893 NC_010682.1 3000630 3003473 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(3000630..3003473) Ralstonia pickettii 12J 6286907 YP_001900449.1 CDS Rpic_2894 NC_010682.1 3003649 3007929 D KEGG: rso:RSc2657 probable transmembrane protein; hypothetical protein 3003649..3007929 Ralstonia pickettii 12J 6286908 YP_001900450.1 CDS Rpic_2895 NC_010682.1 3007935 3008804 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rso:RSc2658 putative nitrilase protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3007935..3008804 Ralstonia pickettii 12J 6286909 YP_001900451.1 CDS Rpic_2896 NC_010682.1 3008834 3010297 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: rso:RSc2659 probable TldD protein; peptidase U62 modulator of DNA gyrase 3008834..3010297 Ralstonia pickettii 12J 6286089 YP_001900452.1 CDS Rpic_2897 NC_010682.1 3010686 3011765 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3010686..3011765 Ralstonia pickettii 12J 6286090 YP_001900453.1 CDS Rpic_2898 NC_010682.1 3011934 3012836 D PFAM: MscS Mechanosensitive ion channel; KEGG: rso:RSc2662 probable transmembrane protein; mechanosensitive ion channel MscS 3011934..3012836 Ralstonia pickettii 12J 6286091 YP_001900454.1 CDS Rpic_2899 NC_010682.1 3012910 3013467 R TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rso:RSc2663 hypothetical protein; ATP/cobalamin adenosyltransferase complement(3012910..3013467) Ralstonia pickettii 12J 6286092 YP_001900455.1 CDS Rpic_2900 NC_010682.1 3013586 3015004 D PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc2664 putative D-lactate dehydrogenase (cytochrome) oxidoreductase protein; FAD linked oxidase domain-containing protein 3013586..3015004 Ralstonia pickettii 12J 6286101 YP_001900456.1 CDS Rpic_2901 NC_010682.1 3015032 3015922 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2665 probable transcription regulator protein; LysR family transcriptional regulator 3015032..3015922 Ralstonia pickettii 12J 6286102 YP_001900457.1 CDS Rpic_2902 NC_010682.1 3016416 3017909 D PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc2666 probable glycolate oxidase (FAD-linked subunit) oxidoreductase protein; D-lactate dehydrogenase 3016416..3017909 Ralstonia pickettii 12J 6286103 YP_001900458.1 CDS glcE NC_010682.1 3017972 3019105 D PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc2667 glycolate oxidase FAD binding subunit; glycolate oxidase FAD binding subunit 3017972..3019105 Ralstonia pickettii 12J 6286104 YP_001900459.1 CDS glcF NC_010682.1 3019118 3020374 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rso:RSc2668 glycolate oxidase iron-sulfur subunit; glycolate oxidase iron-sulfur subunit 3019118..3020374 Ralstonia pickettii 12J 6289211 YP_001900460.1 CDS Rpic_2905 NC_010682.1 3020427 3020804 D PFAM: LrgA family protein; KEGG: rso:RSc2669 probable transmembrane protein; LrgA family protein 3020427..3020804 Ralstonia pickettii 12J 6289212 YP_001900461.1 CDS Rpic_2906 NC_010682.1 3020801 3021532 D PFAM: LrgB family protein; KEGG: rso:RSc2670 probable transmembrane protein; LrgB family protein 3020801..3021532 Ralstonia pickettii 12J 6289213 YP_001900462.1 CDS Rpic_2907 NC_010682.1 3021703 3022098 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rso:RSc2671 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 3021703..3022098 Ralstonia pickettii 12J 6289214 YP_001900463.1 CDS Rpic_2908 NC_010682.1 3022166 3022645 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: rso:RSc2672 hypothetical protein; cupin 3022166..3022645 Ralstonia pickettii 12J 6288267 YP_001900464.1 CDS Rpic_2909 NC_010682.1 3022687 3023385 D PFAM: Helix-turn-helix type 11 domain protein; KEGG: rso:RSc2673 putative repressor transcription regulator protein; helix-turn-helix type 11 domain-containing protein 3022687..3023385 Ralstonia pickettii 12J 6288268 YP_001900465.1 CDS Rpic_2910 NC_010682.1 3023397 3023894 R PFAM: glutathione peroxidase; KEGG: rso:RSc2674 putative glutathione peroxidase protein; glutathione peroxidase complement(3023397..3023894) Ralstonia pickettii 12J 6288269 YP_001900466.1 CDS Rpic_2911 NC_010682.1 3023989 3027225 R KEGG: rso:RSc2675 putative type 4 fimbrial biogenesis PilY1-related protein signal peptide; putative type 4 fimbrial biogenesis PilY1-like protein signal peptide complement(3023989..3027225) Ralstonia pickettii 12J 6288270 YP_001900467.1 CDS Rpic_2912 NC_010682.1 3027255 3027824 R KEGG: rso:RSc2676 probable transmembrane protein; hypothetical protein complement(3027255..3027824) Ralstonia pickettii 12J 6286986 YP_001900468.1 CDS Rpic_2913 NC_010682.1 3027827 3028864 R KEGG: rso:RSc2677 putative type 4 fimbrial biogenesis PilW-related protein transmembrane; putative type 4 fimbrial biogenesis PilW-like protein transmembrane complement(3027827..3028864) Ralstonia pickettii 12J 6286987 YP_001900469.1 CDS Rpic_2914 NC_010682.1 3028861 3029457 R KEGG: rso:RSc2678 probable type 4 fimbrial biogenesis related transmembrane protein; putative type 4 fimbrial biogenesis transmembrane protein complement(3028861..3029457) Ralstonia pickettii 12J 6286988 YP_001900470.1 CDS Rpic_2915 NC_010682.1 3029454 3029927 R KEGG: rso:RSc2679 putative type 4 fimbrial pilin related transmembrane protein; putative type 4 fimbrial pilin related transmembrane protein complement(3029454..3029927) Ralstonia pickettii 12J 6286989 YP_001900471.1 CDS Rpic_2916 NC_010682.1 3029936 3030373 R KEGG: rso:RSc2680 probable type 4 fimbrial biogenesis transmembrane protein; putative type 4 fimbrial biogenesis transmembrane protein complement(3029936..3030373) Ralstonia pickettii 12J 6286436 YP_001900472.1 CDS Rpic_2917 NC_010682.1 3030571 3031710 R TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: rso:RSc2681 putative twitching mobility protein transport fimbria; twitching motility protein complement(3030571..3031710) Ralstonia pickettii 12J 6286437 YP_001900473.1 CDS Rpic_2918 NC_010682.1 3031777 3032820 R KEGG: rso:RSc2682 probable twitching mobility protein transport fimbria; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein complement(3031777..3032820) Ralstonia pickettii 12J 6286438 YP_001900474.1 CDS Rpic_2919 NC_010682.1 3032943 3033659 D PFAM: alanine racemase domain protein; KEGG: rso:RSc2683 hypothetical protein; alanine racemase domain-containing protein 3032943..3033659 Ralstonia pickettii 12J 6286439 YP_001900475.1 CDS Rpic_2920 NC_010682.1 3033646 3034515 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3033646..3034515 Ralstonia pickettii 12J 6288786 YP_001900476.1 CDS ubiA NC_010682.1 3034581 3035423 R catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase complement(3034581..3035423) Ralstonia pickettii 12J 6288787 YP_001900477.1 CDS Rpic_2922 NC_010682.1 3035524 3037689 R TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: aav:Aave_3132 catalase/peroxidase HPI; catalase/peroxidase HPI complement(3035524..3037689) Ralstonia pickettii 12J 6288788 YP_001900478.1 CDS Rpic_2923 NC_010682.1 3037818 3038318 R PFAM: Ferritin Dps family protein; KEGG: rso:RSc2687 putative DNA protection during starvation or oxydative stress transcription regulator protein; ferritin Dps family protein complement(3037818..3038318) Ralstonia pickettii 12J 6288789 YP_001900479.1 CDS Rpic_2924 NC_010682.1 3038493 3038735 R KEGG: rso:RSc2688 probable transmembrane protein; hypothetical protein complement(3038493..3038735) Ralstonia pickettii 12J 6286273 YP_001900480.1 CDS Rpic_2925 NC_010682.1 3038911 3039054 D hypothetical protein 3038911..3039054 Ralstonia pickettii 12J 6286274 YP_001900481.1 CDS Rpic_2926 NC_010682.1 3039508 3040728 D PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bch:Bcen2424_5220 AAA ATPase, central domain protein; ATPase AAA 3039508..3040728 Ralstonia pickettii 12J 6286275 YP_001900482.1 CDS Rpic_2927 NC_010682.1 3040844 3041071 D hypothetical protein 3040844..3041071 Ralstonia pickettii 12J 6286276 YP_001900483.1 CDS Rpic_2928 NC_010682.1 3041049 3041825 D PFAM: metallophosphoesterase; KEGG: mms:mma_3037 metallophosphoesterase; metallophosphoesterase 3041049..3041825 Ralstonia pickettii 12J 6288990 YP_001900484.1 CDS Rpic_2929 NC_010682.1 3041997 3043208 D KEGG: tth:TTC1428 hypothetical protein; hypothetical protein 3041997..3043208 Ralstonia pickettii 12J 6288991 YP_001900485.1 CDS Rpic_2930 NC_010682.1 3043205 3044422 R hypothetical protein complement(3043205..3044422) Ralstonia pickettii 12J 6288992 YP_001900486.1 CDS Rpic_2931 NC_010682.1 3044415 3047024 R KEGG: mla:Mlab_1682 hypothetical protein; hypothetical protein complement(3044415..3047024) Ralstonia pickettii 12J 6288993 YP_001900487.1 CDS Rpic_2932 NC_010682.1 3047467 3047820 D KEGG: xac:XAC2421 hypothetical protein; hypothetical protein 3047467..3047820 Ralstonia pickettii 12J 6289567 YP_001900488.1 CDS Rpic_2933 NC_010682.1 3047910 3049592 D KEGG: pca:Pcar_0116 hypothetical protein; hypothetical protein 3047910..3049592 Ralstonia pickettii 12J 6289568 YP_001900489.1 CDS Rpic_2934 NC_010682.1 3049560 3050621 R KEGG: tcx:Tcr_1645 hypothetical protein; hypothetical protein complement(3049560..3050621) Ralstonia pickettii 12J 6289569 YP_001900490.1 CDS Rpic_2935 NC_010682.1 3050618 3051523 R PFAM: TniB family protein; KEGG: asa:ASA_1044 TniB; TniB family protein complement(3050618..3051523) Ralstonia pickettii 12J 6289570 YP_001900491.1 CDS Rpic_2936 NC_010682.1 3051516 3053438 R KEGG: asa:ASA_1043 TniA transposase; TniA transposase complement(3051516..3053438) Ralstonia pickettii 12J 6289648 YP_001900492.1 CDS Rpic_2937 NC_010682.1 3053441 3054088 R PFAM: TnsA endonuclease; KEGG: pca:Pcar_0126 hypothetical protein; TnsA endonuclease complement(3053441..3054088) Ralstonia pickettii 12J 6289649 YP_001900493.1 CDS Rpic_2938 NC_010682.1 3054443 3054721 D PFAM: protein of unknown function DUF156; KEGG: bte:BTH_II0391 uncharacterized BCR, COG1937 family; hypothetical protein 3054443..3054721 Ralstonia pickettii 12J 6289650 YP_001900494.1 CDS Rpic_2939 NC_010682.1 3054729 3056033 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bte:BTH_II0390 cation efflux system protein; cation diffusion facilitator family transporter 3054729..3056033 Ralstonia pickettii 12J 6289651 YP_001900495.1 CDS Rpic_2940 NC_010682.1 3056165 3057118 D KEGG: nha:Nham_4399 hypothetical protein; hypothetical protein 3056165..3057118 Ralstonia pickettii 12J 6287029 YP_001900496.1 CDS Rpic_2941 NC_010682.1 3057462 3058385 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: reu:Reut_B5170 cation efflux protein; cation diffusion facilitator family transporter 3057462..3058385 Ralstonia pickettii 12J 6287030 YP_001900497.1 CDS Rpic_2942 NC_010682.1 3058382 3059989 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_5322 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3058382..3059989) Ralstonia pickettii 12J 6287031 YP_001900498.1 CDS Rpic_2943 NC_010682.1 3060067 3060672 D PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: rme:Rmet_5323 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3060067..3060672 Ralstonia pickettii 12J 6287032 YP_001900499.1 CDS Rpic_2944 NC_010682.1 3060702 3063866 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_5319 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(3060702..3063866) Ralstonia pickettii 12J 6287768 YP_001900500.1 CDS Rpic_2945 NC_010682.1 3063879 3065033 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_5320 secretion protein HlyD; RND family efflux transporter MFP subunit complement(3063879..3065033) Ralstonia pickettii 12J 6287769 YP_001900501.1 CDS Rpic_2946 NC_010682.1 3065237 3066754 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5321 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 3065237..3066754 Ralstonia pickettii 12J 6287770 YP_001900502.1 CDS Rpic_2947 NC_010682.1 3066794 3067582 R KEGG: pnu:Pnuc_1326 hypothetical protein; hypothetical protein complement(3066794..3067582) Ralstonia pickettii 12J 6287771 YP_001900503.1 CDS Rpic_2948 NC_010682.1 3067867 3068304 D hypothetical protein 3067867..3068304 Ralstonia pickettii 12J 6287480 YP_001900504.1 CDS Rpic_2949 NC_010682.1 3068336 3069979 R PFAM: natural resistance-associated macrophage protein; KEGG: rso:RSp0027 putative manganese transport transmembrane protein; natural resistance-associated macrophage protein complement(3068336..3069979) Ralstonia pickettii 12J 6287481 YP_001900505.1 CDS Rpic_2950 NC_010682.1 3070023 3070229 R KEGG: rso:RS02001 hypothetical protein; hypothetical protein complement(3070023..3070229) Ralstonia pickettii 12J 6287482 YP_001900506.1 CDS Rpic_2951 NC_010682.1 3070466 3071914 R PFAM: Carbohydrate-selective porin OprB; KEGG: rme:Rmet_0352 carbohydrate-selective porin OprB; Carbohydrate-selective porin OprB complement(3070466..3071914) Ralstonia pickettii 12J 6287483 YP_001900507.1 CDS Rpic_2952 NC_010682.1 3072784 3073794 D PFAM: sodium/calcium exchanger membrane region; KEGG: cvi:CV_2442 probable cation antiporter; sodium/calcium exchanger membrane protein 3072784..3073794 Ralstonia pickettii 12J 6289408 YP_001900508.1 CDS Rpic_2953 NC_010682.1 3074081 3075028 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2690 probable hydrogen peroxide-inducible genes activator transcription regulator protein; LysR family transcriptional regulator complement(3074081..3075028) Ralstonia pickettii 12J 6289409 YP_001900509.1 CDS Rpic_2954 NC_010682.1 3075188 3076351 D PFAM: metallophosphoesterase; KEGG: dar:Daro_3826 metallophosphoesterase; metallophosphoesterase 3075188..3076351 Ralstonia pickettii 12J 6289410 YP_001900510.1 CDS Rpic_2955 NC_010682.1 3076606 3078753 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(3076606..3078753) Ralstonia pickettii 12J 6289411 YP_001900511.1 CDS queA NC_010682.1 3078885 3079964 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 3078885..3079964 Ralstonia pickettii 12J 6287484 YP_001900512.1 CDS tgt NC_010682.1 3079967 3081118 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3079967..3081118 Ralstonia pickettii 12J 6287485 YP_001900513.1 CDS yajC NC_010682.1 3081224 3081556 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 3081224..3081556 Ralstonia pickettii 12J 6287486 YP_001900514.1 CDS secD NC_010682.1 3081667 3083556 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3081667..3083556 Ralstonia pickettii 12J 6287487 YP_001900515.1 CDS secF NC_010682.1 3083636 3084607 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3083636..3084607 Ralstonia pickettii 12J 6287551 YP_001900516.1 CDS Rpic_2961 NC_010682.1 3084703 3085299 R PFAM: YceI family protein; KEGG: rso:RSc2717 probable signal peptide protein; hypothetical protein complement(3084703..3085299) Ralstonia pickettii 12J 6287552 YP_001900517.1 CDS Rpic_2962 NC_010682.1 3085363 3085935 R PFAM: YceI family protein; KEGG: rso:RSc2718 probable signal peptide protein; hypothetical protein complement(3085363..3085935) Ralstonia pickettii 12J 6287553 YP_001900518.1 CDS Rpic_2963 NC_010682.1 3086035 3086616 R PFAM: cytochrome B561; KEGG: rso:RSc2719 putative cytochrome b-561 transmembrane protein; cytochrome B561 complement(3086035..3086616) Ralstonia pickettii 12J 6287554 YP_001900519.1 CDS Rpic_2964 NC_010682.1 3086879 3088252 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(3086879..3088252) Ralstonia pickettii 12J 6286396 YP_001900520.1 CDS Rpic_2965 NC_010682.1 3088492 3089100 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2721 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 3088492..3089100 Ralstonia pickettii 12J 6286397 YP_001900521.1 CDS Rpic_2966 NC_010682.1 3089121 3090719 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: rso:RSc2722 putative signal peptide protein; ferredoxin-dependent glutamate synthase complement(3089121..3090719) Ralstonia pickettii 12J 6286398 YP_001900522.1 CDS mnmA NC_010682.1 3090809 3091921 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(3090809..3091921) Ralstonia pickettii 12J 6286399 YP_001900523.1 CDS Rpic_2968 NC_010682.1 3091918 3092412 R PFAM: NUDIX hydrolase; KEGG: rso:RSc2724 hypothetical protein; NUDIX hydrolase complement(3091918..3092412) Ralstonia pickettii 12J 6287468 YP_001900524.1 CDS Rpic_2969 NC_010682.1 3092701 3093840 D PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rso:RSc2730 probable NAD(P) transhydrogenase (alpha subunit part 1) oxidoreductase protein; NAD(P)(+) transhydrogenase 3092701..3093840 Ralstonia pickettii 12J 6287469 YP_001900525.1 CDS Rpic_2970 NC_010682.1 3093924 3094286 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 3093924..3094286 Ralstonia pickettii 12J 6287470 YP_001900526.1 CDS Rpic_2971 NC_010682.1 3094357 3094686 D KEGG: rme:Rmet_2964 NAD/NADP transhydrogenase alpha subunit-like protein; NAD/NADP transhydrogenase subunit alpha-like protein 3094357..3094686 Ralstonia pickettii 12J 6287471 YP_001900527.1 CDS Rpic_2972 NC_010682.1 3094683 3096143 D PFAM: NAD(P) transhydrogenase beta subunit; KEGG: rso:RSc2733 probable transmembrane NADP transhydrogenase (beta subunit) oxidoreductase protein; NAD(P)(+) transhydrogenase 3094683..3096143 Ralstonia pickettii 12J 6287121 YP_001900528.1 CDS Rpic_2973 NC_010682.1 3096294 3097331 D PFAM: response regulator receiver; KEGG: rso:RSc2734 probable response regulator transcription regulator protein; response regulator receiver protein 3096294..3097331 Ralstonia pickettii 12J 6287122 YP_001900529.1 CDS Rpic_2974 NC_010682.1 3097987 3099399 D KEGG: rso:RSc2735 regulatory protein; regulatory protein 3097987..3099399 Ralstonia pickettii 12J 6287123 YP_001900530.1 CDS Rpic_2975 NC_010682.1 3099420 3100748 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc2736 transmembrane sensor histidine kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase 3099420..3100748 Ralstonia pickettii 12J 6287124 YP_001900531.1 CDS Rpic_2976 NC_010682.1 3100756 3101862 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc2737 two component response regulator transcription regulator protein; response regulator receiver sensor signal transduction histidine kinase 3100756..3101862 Ralstonia pickettii 12J 6287492 YP_001900532.1 CDS Rpic_2977 NC_010682.1 3101945 3102964 D PFAM: response regulator receiver; KEGG: rso:RSc2738 probable response regulator transcription regulator protein; response regulator receiver protein 3101945..3102964 Ralstonia pickettii 12J 6287493 YP_001900533.1 CDS Rpic_2978 NC_010682.1 3102998 3104416 R PFAM: putative RNA methylase; THUMP domain protein; KEGG: rso:RSc2739 hypothetical protein; putative RNA methylase complement(3102998..3104416) Ralstonia pickettii 12J 6287494 YP_001900534.1 CDS Rpic_2979 NC_010682.1 3104433 3104855 R PFAM: conserved hypothetical protein; KEGG: rso:RSc2740 probable transmembrane protein; hypothetical protein complement(3104433..3104855) Ralstonia pickettii 12J 6287495 YP_001900535.1 CDS proA NC_010682.1 3104941 3106221 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(3104941..3106221) Ralstonia pickettii 12J 6289703 YP_001900536.1 CDS holA NC_010682.1 3106294 3107370 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(3106294..3107370) Ralstonia pickettii 12J 6289704 YP_001900537.1 CDS Rpic_2982 NC_010682.1 3107396 3107920 R PFAM: Rare lipoprotein B; KEGG: rso:RSc2743 putative lipoprotein B precursor transmembrane; Rare lipoprotein B complement(3107396..3107920) Ralstonia pickettii 12J 6289705 YP_001900538.1 CDS leuS NC_010682.1 3107951 3110584 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(3107951..3110584) Ralstonia pickettii 12J 6289706 YP_001900539.1 CDS Rpic_2984 NC_010682.1 3110763 3111554 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(3110763..3111554) Ralstonia pickettii 12J 6289077 YP_001900540.1 CDS Rpic_2985 NC_010682.1 3111661 3112317 R PFAM: SmpA/OmlA domain protein; KEGG: rso:RSc2746 putative lipoprotein transmembrane; SmpA/OmlA domain-containing protein complement(3111661..3112317) Ralstonia pickettii 12J 6289078 YP_001900541.1 CDS Rpic_2986 NC_010682.1 3112467 3112898 D PFAM: ferric-uptake regulator; KEGG: rso:RSc2747 probable ferric uptake transcriptional repressor transcription regulator protein; Fur family ferric uptake regulator 3112467..3112898 Ralstonia pickettii 12J 6289079 YP_001900542.1 CDS Rpic_2987 NC_010682.1 3112971 3114014 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2748 transcription regulator protein; LysR family transcriptional regulator complement(3112971..3114014) Ralstonia pickettii 12J 6289080 YP_001900543.1 CDS Rpic_2988 NC_010682.1 3114332 3115330 R KEGG: reu:Reut_A2840 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(3114332..3115330) Ralstonia pickettii 12J 6288928 YP_001900544.1 CDS Rpic_2989 NC_010682.1 3115417 3117432 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(3115417..3117432) Ralstonia pickettii 12J 6288929 YP_001900545.1 CDS Rpic_2990 NC_010682.1 3117548 3118696 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rso:RSc2751 putative galactonate dehydratase protein; galactonate dehydratase complement(3117548..3118696) Ralstonia pickettii 12J 6288930 YP_001900546.1 CDS Rpic_2991 NC_010682.1 3118717 3119343 R catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(3118717..3119343) Ralstonia pickettii 12J 6288931 YP_001900547.1 CDS Rpic_2992 NC_010682.1 3119340 3120149 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc2753 short chain dehydrogenase; short chain dehydrogenase complement(3119340..3120149) Ralstonia pickettii 12J 6289616 YP_001900548.1 CDS Rpic_2993 NC_010682.1 3120146 3121030 R PFAM: Aldose 1-epimerase; KEGG: rso:RSc2754 hypothetical protein; aldose 1-epimerase complement(3120146..3121030) Ralstonia pickettii 12J 6289617 YP_001900549.1 CDS Rpic_2994 NC_010682.1 3121011 3121925 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; SMART: low-density lipoprotein receptor YWTD repeat; KEGG: rso:RSc2755 hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein complement(3121011..3121925) Ralstonia pickettii 12J 6289618 YP_001900550.1 CDS araH NC_010682.1 3121936 3122943 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease complement(3121936..3122943) Ralstonia pickettii 12J 6289619 YP_001900551.1 CDS araG NC_010682.1 3122961 3124496 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein complement(3122961..3124496) Ralstonia pickettii 12J 6289471 YP_001900552.1 CDS Rpic_2997 NC_010682.1 3124530 3125534 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc2758 probable L-arabinose-binding periplasmic (PBP) ABC transporter protein; monosaccharide-transporting ATPase complement(3124530..3125534) Ralstonia pickettii 12J 6289472 YP_001900553.1 CDS Rpic_2998 NC_010682.1 3125611 3126624 R KEGG: rso:RSc2759 probable 2-dehydro-3-deoxygalactonokinase protein; putative 2-dehydro-3-deoxygalactonokinase protein complement(3125611..3126624) Ralstonia pickettii 12J 6289473 YP_001900554.1 CDS Rpic_2999 NC_010682.1 3126799 3127863 R PFAM: porin Gram-negative type; KEGG: rso:RSc2760 putative porin signal peptide protein; porin complement(3126799..3127863) Ralstonia pickettii 12J 6289474 YP_001900555.1 CDS Rpic_3000 NC_010682.1 3128039 3128965 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2761 probable transcription regulator protein; LysR family transcriptional regulator 3128039..3128965 Ralstonia pickettii 12J 6288832 YP_001900556.1 CDS Rpic_3001 NC_010682.1 3129043 3129462 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rso:RSc2762 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 3129043..3129462 Ralstonia pickettii 12J 6288833 YP_001900557.1 CDS Rpic_3002 NC_010682.1 3129512 3130261 D PFAM: protein of unknown function DUF558; KEGG: rso:RSc2763 hypothetical protein; hypothetical protein 3129512..3130261 Ralstonia pickettii 12J 6288834 YP_001900558.1 CDS Rpic_3003 NC_010682.1 3130354 3130953 D PFAM: protein of unknown function DUF937; KEGG: rso:RSc2764 hypothetical protein; hypothetical protein 3130354..3130953 Ralstonia pickettii 12J 6288835 YP_001900559.1 CDS Rpic_3004 NC_010682.1 3131014 3131958 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4926 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3131014..3131958) Ralstonia pickettii 12J 6286085 YP_001900560.1 CDS Rpic_3005 NC_010682.1 3132158 3133894 D catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 3132158..3133894 Ralstonia pickettii 12J 6286086 YP_001900561.1 CDS Rpic_3006 NC_010682.1 3133921 3134862 D PFAM: dihydrodipicolinate synthetase; KEGG: aav:Aave_2247 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 3133921..3134862 Ralstonia pickettii 12J 6286087 YP_001900562.1 CDS Rpic_3007 NC_010682.1 3134865 3135803 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bam:Bamb_4922 galactose 1-dehydrogenase; galactose 1-dehydrogenase 3134865..3135803 Ralstonia pickettii 12J 6286088 YP_001900563.1 CDS Rpic_3008 NC_010682.1 3135857 3136861 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_II1628 L-arabinose ABC transporter, periplasmic L-arabinose-binding protein; monosaccharide-transporting ATPase 3135857..3136861 Ralstonia pickettii 12J 6286176 YP_001900564.1 CDS araG NC_010682.1 3136919 3138448 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 3136919..3138448 Ralstonia pickettii 12J 6286177 YP_001900565.1 CDS araH NC_010682.1 3138482 3139492 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 3138482..3139492 Ralstonia pickettii 12J 6286178 YP_001900566.1 CDS Rpic_3011 NC_010682.1 3139596 3140219 R KEGG: rso:RSc2765 hypothetical protein; hypothetical protein complement(3139596..3140219) Ralstonia pickettii 12J 6286179 YP_001900567.1 CDS Rpic_3012 NC_010682.1 3140216 3140647 R PFAM: guanine-specific ribonuclease N1 and T1; KEGG: rso:RSc2766 probable guanyl-specific ribonuclease precursor signal peptide protein; guanine-specific ribonuclease N1 and T1 complement(3140216..3140647) Ralstonia pickettii 12J 6287900 YP_001900568.1 CDS Rpic_3013 NC_010682.1 3141120 3143465 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(3141120..3143465) Ralstonia pickettii 12J 6287901 YP_001900569.1 CDS Rpic_3014 NC_010682.1 3143627 3144712 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 3143627..3144712 Ralstonia pickettii 12J 6287902 YP_001900570.1 CDS Rpic_3015 NC_010682.1 3144709 3145287 D PFAM: phosphatidylglycerophosphatase A; KEGG: rso:RSc2769 probable phosphatidyl-glycerophosphatase hydrolase transmembrane protein; phosphatidylglycerophosphatase A 3144709..3145287 Ralstonia pickettii 12J 6287903 YP_001900571.1 CDS Rpic_3016 NC_010682.1 3145320 3145820 D PFAM: CinA domain protein; KEGG: rso:RSc2770 hypothetical protein; CinA domain-containing protein 3145320..3145820 Ralstonia pickettii 12J 6286970 YP_001900572.1 CDS Rpic_3017 NC_010682.1 3145822 3146040 R KEGG: rso:RSc2772 putative metal transport transmembrane protein; putative metal transport transmembrane protein complement(3145822..3146040) Ralstonia pickettii 12J 6286971 YP_001900573.1 CDS pyrF NC_010682.1 3146081 3146896 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3146081..3146896) Ralstonia pickettii 12J 6286972 YP_001900574.1 CDS Rpic_3019 NC_010682.1 3147107 3148069 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: rso:RSc2774 probable magnesium and cobalt transport transmembrane protein; magnesium and cobalt transport protein CorA 3147107..3148069 Ralstonia pickettii 12J 6286973 YP_001900575.1 CDS mtgA NC_010682.1 3148082 3148786 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(3148082..3148786) Ralstonia pickettii 12J 6288655 YP_001900576.1 CDS aroE NC_010682.1 3148807 3149724 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3148807..3149724) Ralstonia pickettii 12J 6288656 YP_001900577.1 CDS Rpic_3022 NC_010682.1 3149736 3150650 R TIGRFAM: TonB family protein; KEGG: rso:RSc2778 hypothetical protein; TonB family protein complement(3149736..3150650) Ralstonia pickettii 12J 6288657 YP_001900578.1 CDS Rpic_3023 NC_010682.1 3150703 3152799 R PFAM: ribonuclease II; KEGG: rso:RSc2779 hypothetical protein; ribonuclease II complement(3150703..3152799) Ralstonia pickettii 12J 6288658 YP_001900579.1 CDS Rpic_3024 NC_010682.1 3152952 3153530 R PFAM: Chorismate lyase; KEGG: rso:RSc2780 hypothetical protein; chorismate lyase complement(3152952..3153530) Ralstonia pickettii 12J 6288413 YP_001900580.1 CDS Rpic_3025 NC_010682.1 3153527 3154150 R PFAM: protein of unknown function UPF0227; KEGG: rso:RSc2781 hypothetical protein; hypothetical protein complement(3153527..3154150) Ralstonia pickettii 12J 6288414 YP_001900581.1 CDS Rpic_3026 NC_010682.1 3154158 3155543 R TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rso:RSc2782 probable UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase transmembrane protein; UDP-N-acetylmuramate complement(3154158..3155543) Ralstonia pickettii 12J 6288415 YP_001900582.1 CDS Rpic_3027 NC_010682.1 3155622 3156296 D KEGG: rso:RSc2783 hypothetical protein; hypothetical protein 3155622..3156296 Ralstonia pickettii 12J 6288416 YP_001900583.1 CDS Rpic_3028 NC_010682.1 3156363 3156887 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: rso:RSc2784 putative thioredoxin-related transmembrane protein; alkyl hydroperoxide reductase 3156363..3156887 Ralstonia pickettii 12J 6288390 YP_001900584.1 CDS Rpic_3029 NC_010682.1 3156905 3157027 D hypothetical protein 3156905..3157027 Ralstonia pickettii 12J 6288391 YP_001900585.1 CDS Rpic_3030 NC_010682.1 3157071 3157538 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3157071..3157538 Ralstonia pickettii 12J 6288392 YP_001900586.1 CDS Rpic_3031 NC_010682.1 3157681 3158148 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3157681..3158148 Ralstonia pickettii 12J 6288393 YP_001900587.1 CDS Rpic_3032 NC_010682.1 3158281 3159648 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 3158281..3159648 Ralstonia pickettii 12J 6286362 YP_001900588.1 CDS prmA NC_010682.1 3159645 3160541 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 3159645..3160541 Ralstonia pickettii 12J 6286363 YP_001900589.1 CDS Rpic_3034 NC_010682.1 3160638 3162098 D TIGRFAM: MJ0042 family finger-like protein; KEGG: rso:RSc2789 probable transmembrane protein; hypothetical protein 3160638..3162098 Ralstonia pickettii 12J 6286364 YP_001900590.1 CDS tpx NC_010682.1 3162249 3162749 D antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 3162249..3162749 Ralstonia pickettii 12J 6286365 YP_001900591.1 CDS Rpic_3036 NC_010682.1 3162842 3163777 D PFAM: PfkB domain protein; KEGG: rso:RSc2791 putative sugar kinase transferase protein; PfkB domain-containing protein 3162842..3163777 Ralstonia pickettii 12J 6286601 YP_001900592.1 CDS Rpic_3037 NC_010682.1 3163787 3164254 D PFAM: 17 kDa surface antigen; KEGG: rso:RSc2792 putative outer membrane lipoprotein transmembrane; 17 kDa surface antigen 3163787..3164254 Ralstonia pickettii 12J 6286602 YP_001900593.1 CDS Rpic_3038 NC_010682.1 3164507 3165067 R KEGG: rso:RSc2793 probable histone H1 protein; putative histone H1 protein complement(3164507..3165067) Ralstonia pickettii 12J 6286603 YP_001900594.1 CDS Rpic_3039 NC_010682.1 3166811 3167620 D KEGG: rso:RSc2796 putative hemagglutinin-related transmembrane protein; putative hemagglutinin-like transmembrane protein 3166811..3167620 Ralstonia pickettii 12J 6286604 YP_001900595.1 CDS Rpic_3040 NC_010682.1 3167753 3168865 D KEGG: rso:RSc2797 putative hemagglutinin-related transmembrane protein; putative hemagglutinin-like transmembrane protein 3167753..3168865 Ralstonia pickettii 12J 6286097 YP_001900596.1 CDS Rpic_3041 NC_010682.1 3168932 3169387 D KEGG: rso:RSc2798 hypothetical signal peptide protein; hypothetical protein 3168932..3169387 Ralstonia pickettii 12J 6286098 YP_001900597.1 CDS Rpic_3042 NC_010682.1 3169595 3171142 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: rso:RSc2799 putative methyl-accepting chemotaxis transmembrane protein; methyl-accepting chemotaxis sensory transducer 3169595..3171142 Ralstonia pickettii 12J 6286099 YP_001900598.1 CDS Rpic_3043 NC_010682.1 3171261 3172604 D KEGG: rso:RSc2800 hypothetical protein; hypothetical protein 3171261..3172604 Ralstonia pickettii 12J 6286100 YP_001900599.1 CDS Rpic_3044 NC_010682.1 3172780 3173637 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc2802 probable transmembrane protein; hypothetical protein 3172780..3173637 Ralstonia pickettii 12J 6289204 YP_001900600.1 CDS Rpic_3045 NC_010682.1 3173641 3174723 R KEGG: rso:RSc2803 hypothetical protein; hypothetical protein complement(3173641..3174723) Ralstonia pickettii 12J 6289205 YP_001900601.1 CDS Rpic_3046 NC_010682.1 3174893 3176101 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(3174893..3176101) Ralstonia pickettii 12J 6289206 YP_001900602.1 CDS Rpic_3047 NC_010682.1 3176218 3179202 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(3176218..3179202) Ralstonia pickettii 12J 6289207 YP_001900603.1 CDS Rpic_3048 NC_010682.1 3179852 3181882 D KEGG: reu:Reut_B4286 hypothetical protein; hypothetical protein 3179852..3181882 Ralstonia pickettii 12J 6288623 YP_001900604.1 CDS Rpic_3049 NC_010682.1 3181913 3182113 D KEGG: reh:H16_B1167 hypothetical protein; hypothetical protein 3181913..3182113 Ralstonia pickettii 12J 6288624 YP_001900605.1 CDS Rpic_3050 NC_010682.1 3182150 3184309 D KEGG: reu:Reut_B4287 twin-arginine translocation pathway signal; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phosphocholine-specific phospholipase C 3182150..3184309 Ralstonia pickettii 12J 6288625 YP_001900606.1 CDS Rpic_3051 NC_010682.1 3184964 3185560 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rso:RSc2806 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase complement(3184964..3185560) Ralstonia pickettii 12J 6288626 YP_001900607.1 CDS Rpic_3052 NC_010682.1 3185553 3187178 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: rso:RSc2807 probable response regulator transcription regulator protein; Fis family two component sigma-54 specific transcriptional regulator complement(3185553..3187178) Ralstonia pickettii 12J 6288238 YP_001900608.1 CDS Rpic_3053 NC_010682.1 3187218 3189257 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: rso:RSc2808 probable transmembrane sensor histidine kinase transcription regulator protein; multi-sensor signal transduction histidine kinase complement(3187218..3189257) Ralstonia pickettii 12J 6288239 YP_001900609.1 CDS Rpic_3054 NC_010682.1 3189254 3189520 R KEGG: rso:RSc2809 hypothetical protein; hypothetical protein complement(3189254..3189520) Ralstonia pickettii 12J 6288240 YP_001900610.1 CDS Rpic_3055 NC_010682.1 3189566 3190474 R PFAM: cytochrome c assembly protein; KEGG: rso:RSc2810 probable transmembrane protein; cytochrome c assembly protein complement(3189566..3190474) Ralstonia pickettii 12J 6288241 YP_001900611.1 CDS Rpic_3056 NC_010682.1 3190649 3192064 D KEGG: rso:RSc2811 putative signal recognition particle protein (fifty-four homolog) (P48); TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 3190649..3192064 Ralstonia pickettii 12J 6286172 YP_001900612.1 CDS Rpic_3057 NC_010682.1 3192133 3192681 D Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 3192133..3192681 Ralstonia pickettii 12J 6286173 YP_001900613.1 CDS Rpic_3058 NC_010682.1 3192747 3193340 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: rso:RSc2813 probable transmembrane protein; multiple antibiotic resistance (MarC)-like protein complement(3192747..3193340) Ralstonia pickettii 12J 6286174 YP_001900614.1 CDS Rpic_3059 NC_010682.1 3193353 3194219 R KEGG: rso:RSc2814 hypothetical protein; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; procollagen-proline dioxygenase complement(3193353..3194219) Ralstonia pickettii 12J 6286175 YP_001900615.1 CDS Rpic_3060 NC_010682.1 3194286 3195047 R PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc2815 hypothetical signal peptide protein; lytic transglycosylase catalytic subunit complement(3194286..3195047) Ralstonia pickettii 12J 6286857 YP_001900616.1 CDS Rpic_3061 NC_010682.1 3195070 3196794 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3195070..3196794) Ralstonia pickettii 12J 6286858 YP_001900617.1 CDS Rpic_3062 NC_010682.1 3197015 3197722 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3197015..3197722 Ralstonia pickettii 12J 6286859 YP_001900618.1 CDS Rpic_3063 NC_010682.1 3197728 3198357 D PFAM: Protein of unknown function CNP1-like; KEGG: rso:RSc2818 putative lipoprotein; hypothetical protein 3197728..3198357 Ralstonia pickettii 12J 6286860 YP_001900619.1 CDS Rpic_3064 NC_010682.1 3198450 3199574 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(3198450..3199574) Ralstonia pickettii 12J 6289009 YP_001900620.1 CDS obgE NC_010682.1 3199608 3200702 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3199608..3200702) Ralstonia pickettii 12J 6289010 YP_001900621.1 CDS rpmA NC_010682.1 3200898 3201158 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3200898..3201158) Ralstonia pickettii 12J 6289011 YP_001900622.1 CDS rplU NC_010682.1 3201196 3201507 R PFAM: ribosomal protein L21; KEGG: rso:RSc2822 50S ribosomal protein L21; 50S ribosomal protein L21 complement(3201196..3201507) Ralstonia pickettii 12J 6289012 YP_001900623.1 CDS Rpic_3068 NC_010682.1 3201797 3202774 D PFAM: Polyprenyl synthetase; KEGG: rso:RSc2823 probable octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein; polyprenyl synthetase 3201797..3202774 Ralstonia pickettii 12J 6286821 YP_001900624.1 CDS Rpic_3069 NC_010682.1 3203047 3204321 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rso:RSc2824 probable transmembrane protein; hypothetical protein 3203047..3204321 Ralstonia pickettii 12J 6286823 YP_001900625.1 CDS Rpic_3070 NC_010682.1 3204581 3206308 D TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: rso:RSc2825 probable type IV pilus assembly protein; type IV-A pilus assembly ATPase PilB 3204581..3206308 Ralstonia pickettii 12J 6286994 YP_001900626.1 CDS Rpic_3071 NC_010682.1 3206353 3207627 D PFAM: type II secretion system protein; KEGG: rso:RSc2826 probable fimbrial assembly transmembrane protein; type II secretion system protein 3206353..3207627 Ralstonia pickettii 12J 6286995 YP_001900627.1 CDS Rpic_3072 NC_010682.1 3207632 3208513 D PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: rso:RSc2827 probable type 4 prepilin peptidase bifunctionnal: leader peptidase and N-methyltransferase transmembrane protein; prepilin peptidase 3207632..3208513 Ralstonia pickettii 12J 6286996 YP_001900628.1 CDS coaE NC_010682.1 3208527 3209141 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3208527..3209141 Ralstonia pickettii 12J 6286997 YP_001900629.1 CDS Rpic_3074 NC_010682.1 3209277 3210035 D PFAM: protein of unknown function DUF1342; KEGG: rso:RSc2829 hypothetical protein; hypothetical protein 3209277..3210035 Ralstonia pickettii 12J 6288303 YP_001900630.1 CDS Rpic_3075 NC_010682.1 3210044 3210247 D PFAM: protein of unknown function DUF329; KEGG: rso:RSc2830 hypothetical protein; hypothetical protein 3210044..3210247 Ralstonia pickettii 12J 6288304 YP_001900631.1 CDS Rpic_3076 NC_010682.1 3210240 3210689 R PFAM: NUDIX hydrolase; KEGG: rso:RSc2831 probable mutator MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase); NUDIX hydrolase complement(3210240..3210689) Ralstonia pickettii 12J 6288305 YP_001900632.1 CDS Rpic_3077 NC_010682.1 3210679 3211563 R PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: rso:RSc2832 hypothetical protein; hypothetical protein complement(3210679..3211563) Ralstonia pickettii 12J 6288306 YP_001900633.1 CDS argJ NC_010682.1 3211580 3212809 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(3211580..3212809) Ralstonia pickettii 12J 6288849 YP_001900634.1 CDS Rpic_3079 NC_010682.1 3212884 3215688 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(3212884..3215688) Ralstonia pickettii 12J 6288850 YP_001900635.1 CDS Rpic_3080 NC_010682.1 3215939 3216904 R PFAM: Peptidase M23; KEGG: rso:RSc2835 putative transmembrane protein; peptidase M23 complement(3215939..3216904) Ralstonia pickettii 12J 6288851 YP_001900636.1 CDS Rpic_3081 NC_010682.1 3216974 3217495 D KEGG: rso:RSc2836 hypothetical protein; hypothetical protein 3216974..3217495 Ralstonia pickettii 12J 6288852 YP_001900637.1 CDS lpxC NC_010682.1 3217545 3218462 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3217545..3218462) Ralstonia pickettii 12J 6289774 YP_001900638.1 CDS Rpic_3083 NC_010682.1 3218708 3219208 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc2838 probable type 2 peroxiredoxin protein; redoxin domain-containing protein complement(3218708..3219208) Ralstonia pickettii 12J 6289775 YP_001900639.1 CDS Rpic_3084 NC_010682.1 3219600 3220799 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(3219600..3220799) Ralstonia pickettii 12J 6289776 YP_001900640.1 CDS Rpic_3085 NC_010682.1 3220940 3222172 R PFAM: cell division protein FtsA; KEGG: rso:RSc2840 probable cell division protein FtsA; cell division protein FtsA complement(3220940..3222172) Ralstonia pickettii 12J 6289777 YP_001900641.1 CDS Rpic_3086 NC_010682.1 3222169 3223080 R PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: rso:RSc2841 putative cell division transmembrane protein; Polypeptide-transport-associated domain-containing protein FtsQ-type complement(3222169..3223080) Ralstonia pickettii 12J 6286113 YP_001900642.1 CDS ddl NC_010682.1 3223118 3224113 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(3223118..3224113) Ralstonia pickettii 12J 6286114 YP_001900643.1 CDS murC NC_010682.1 3224110 3225561 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(3224110..3225561) Ralstonia pickettii 12J 6286115 YP_001900644.1 CDS murG NC_010682.1 3225575 3226675 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(3225575..3226675) Ralstonia pickettii 12J 6286116 YP_001900645.1 CDS Rpic_3090 NC_010682.1 3226672 3227913 R TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rso:RSc2845 probable cell division FtsW transmembrane protein; cell division protein FtsW complement(3226672..3227913) Ralstonia pickettii 12J 6286065 YP_001900646.1 CDS murD NC_010682.1 3227910 3229550 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3227910..3229550) Ralstonia pickettii 12J 6286066 YP_001900647.1 CDS mraY NC_010682.1 3229559 3230728 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(3229559..3230728) Ralstonia pickettii 12J 6286067 YP_001900648.1 CDS Rpic_3093 NC_010682.1 3230744 3232180 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rso:RSc2848 probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(3230744..3232180) Ralstonia pickettii 12J 6286068 YP_001900649.1 CDS murE NC_010682.1 3232177 3233721 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(3232177..3233721) Ralstonia pickettii 12J 6289219 YP_001900650.1 CDS Rpic_3095 NC_010682.1 3233718 3235505 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rso:RSc2850 probable penicillin-binding 3 precursor PBP-3 transmembrane protein; peptidoglycan glycosyltransferase complement(3233718..3235505) Ralstonia pickettii 12J 6289220 YP_001900651.1 CDS Rpic_3096 NC_010682.1 3235502 3235846 R PFAM: cell division protein FtsL; KEGG: rso:RSc2851 probable cell division FtsL transmembrane protein; cell division protein FtsL complement(3235502..3235846) Ralstonia pickettii 12J 6289221 YP_001900652.1 CDS mraW NC_010682.1 3235863 3236822 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rso:RSc2852 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(3235863..3236822) Ralstonia pickettii 12J 6289222 YP_001900653.1 CDS Rpic_3098 NC_010682.1 3236832 3237260 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(3236832..3237260) Ralstonia pickettii 12J 6288971 YP_001900654.1 CDS Rpic_3099 NC_010682.1 3237643 3238296 R KEGG: rso:RSc2854 hypothetical protein; hypothetical protein complement(3237643..3238296) Ralstonia pickettii 12J 6288972 YP_001900655.1 CDS Rpic_3100 NC_010682.1 3238677 3239855 D PFAM: porin Gram-negative type; KEGG: rso:RSc2855 putative outer membrane porin signal peptide protein; porin 3238677..3239855 Ralstonia pickettii 12J 6288973 YP_001900656.1 CDS Rpic_3101 NC_010682.1 3240043 3241359 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSc2856 putative metabolite transport transmembrane protein; major facilitator superfamily metabolite/H+ symporter 3240043..3241359 Ralstonia pickettii 12J 6288974 YP_001900657.1 CDS Rpic_3102 NC_010682.1 3241381 3241815 R PFAM: Class I peptide chain release factor; KEGG: xom:XOO_0318 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein complement(3241381..3241815) Ralstonia pickettii 12J 6289312 YP_001900658.1 CDS Rpic_3103 NC_010682.1 3241859 3242476 D TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: reu:Reut_B5210 HylII; hemolysin III family channel protein 3241859..3242476 Ralstonia pickettii 12J 6289313 YP_001900659.1 CDS Rpic_3104 NC_010682.1 3242533 3244242 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(3242533..3244242) Ralstonia pickettii 12J 6289314 YP_001900660.1 CDS Rpic_3105 NC_010682.1 3244394 3245491 R KEGG: rso:RSc2858 putative zinc protease protein; putative zinc protease protein complement(3244394..3245491) Ralstonia pickettii 12J 6289315 YP_001900661.1 CDS Rpic_3106 NC_010682.1 3245502 3247598 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rso:RSc2859 hypothetical oxidoreductase protein; molybdopterin oxidoreductase complement(3245502..3247598) Ralstonia pickettii 12J 6287951 YP_001900662.1 CDS Rpic_3107 NC_010682.1 3247681 3248676 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc2860 putative transcription regulation repressor transcription regulator protein; LacI family transcriptional regulator complement(3247681..3248676) Ralstonia pickettii 12J 6287952 YP_001900663.1 CDS Rpic_3108 NC_010682.1 3248894 3251434 D TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: rso:RSc2861 probable multiphosphoryl transfer protein MTP; phosphoenolpyruvate-protein phosphotransferase 3248894..3251434 Ralstonia pickettii 12J 6287953 YP_001900664.1 CDS Rpic_3109 NC_010682.1 3251431 3252387 D KEGG: rso:RSc2862 probable 1-phosphofructokinase protein; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 3251431..3252387 Ralstonia pickettii 12J 6287954 YP_001900665.1 CDS Rpic_3110 NC_010682.1 3252437 3254152 D TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS fructose-specific IIB subunit; KEGG: rso:RSc2863 probable PTS system, fructose-specific IIBC component (EIIBC-FRU) (fructose-permease IIBC component) transmembrane protein; PTS system fructose subfamily transporter subunit IIC 3252437..3254152 Ralstonia pickettii 12J 6287872 YP_001900666.1 CDS Rpic_3111 NC_010682.1 3254300 3255457 D PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc2864 probable Leu/Ile/Val-binding signal peptide protein; extracellular ligand-binding receptor 3254300..3255457 Ralstonia pickettii 12J 6287873 YP_001900667.1 CDS Rpic_3112 NC_010682.1 3255509 3256711 R TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pol:Bpro_2527 acetylornithine deacetylase (ArgE); acetylornithine deacetylase ArgE complement(3255509..3256711) Ralstonia pickettii 12J 6287874 YP_001900668.1 CDS Rpic_3113 NC_010682.1 3256978 3258168 D KEGG: rso:RSc2871 putative hippurate hydrolase protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3256978..3258168 Ralstonia pickettii 12J 6287875 YP_001900669.1 CDS Rpic_3114 NC_010682.1 3264124 3264900 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(3264124..3264900) Ralstonia pickettii 12J 6288433 YP_001900670.1 CDS Rpic_3115 NC_010682.1 3264984 3265772 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3264984..3265772 Ralstonia pickettii 12J 6288434 YP_001900671.1 CDS Rpic_3116 NC_010682.1 3265783 3266244 D TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: rso:RSc2874 probable phenylacetic acid degradation protein; phenylacetic acid degradation protein PaaD 3265783..3266244 Ralstonia pickettii 12J 6288435 YP_001900672.1 CDS Rpic_3117 NC_010682.1 3266449 3267753 D TIGRFAM: phenylacetate-CoA ligase; KEGG: rso:RSc2875 probable phenylacetyl-CoA-ligase protein; phenylacetate-CoA ligase 3266449..3267753 Ralstonia pickettii 12J 6288436 YP_001900673.1 CDS Rpic_3118 NC_010682.1 3267768 3268910 R PFAM: MltA domain protein; 3D domain protein; KEGG: rso:RSc2876 putative membrane-bound lytic murein transglycosylase A transmembrane protein; MltA domain-containing protein complement(3267768..3268910) Ralstonia pickettii 12J 6288939 YP_001900674.1 CDS Rpic_3119 NC_010682.1 3268985 3269218 D KEGG: rso:RSc2877 probable transmembrane protein; hypothetical protein 3268985..3269218 Ralstonia pickettii 12J 6288940 YP_001900675.1 CDS apaG NC_010682.1 3269226 3269600 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(3269226..3269600) Ralstonia pickettii 12J 6288941 YP_001900676.1 CDS Rpic_3121 NC_010682.1 3269743 3270468 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 3269743..3270468 Ralstonia pickettii 12J 6288942 YP_001900677.1 CDS Rpic_3122 NC_010682.1 3270465 3271211 D TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc2880 probable phosphoglycolate phosphatase protein; phosphoglycolate phosphatase 3270465..3271211 Ralstonia pickettii 12J 6288386 YP_001900678.1 CDS Rpic_3123 NC_010682.1 3271598 3273130 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 3271598..3273130 Ralstonia pickettii 12J 6288387 YP_001900679.1 CDS Rpic_3124 NC_010682.1 3273147 3273716 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 3273147..3273716 Ralstonia pickettii 12J 6288388 YP_001900680.1 CDS Rpic_3125 NC_010682.1 3273716 3274147 D KEGG: rso:RSc2883 putative signal peptide protein; putative signal peptide protein 3273716..3274147 Ralstonia pickettii 12J 6288389 YP_001900681.1 CDS trpD NC_010682.1 3274161 3275198 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 3274161..3275198 Ralstonia pickettii 12J 6286105 YP_001900682.1 CDS trpC NC_010682.1 3275200 3276003 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 3275200..3276003 Ralstonia pickettii 12J 6286106 YP_001900683.1 CDS Rpic_3128 NC_010682.1 3276016 3276675 D PFAM: adenylate cyclase; KEGG: rso:RSc2886 hypothetical protein; adenylate cyclase 3276016..3276675 Ralstonia pickettii 12J 6286107 YP_001900684.1 CDS Rpic_3129 NC_010682.1 3276672 3277463 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3276672..3277463 Ralstonia pickettii 12J 6286108 YP_001900685.1 CDS Rpic_3131 NC_010682.1 3277818 3280034 R PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: rso:RSc2889 probable transmembrane protein; hypothetical protein complement(3277818..3280034) Ralstonia pickettii 12J 6286686 YP_001900686.1 CDS Rpic_3132 NC_010682.1 3280046 3281917 R PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: rso:RSc2890 hypothetical protein; peptidase M61 domain-containing protein complement(3280046..3281917) Ralstonia pickettii 12J 6286687 YP_001900687.1 CDS Rpic_3133 NC_010682.1 3281976 3282992 R TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc2891 putative oxidoreductase protein; YhdH/YhfP family quinone oxidoreductase complement(3281976..3282992) Ralstonia pickettii 12J 6286688 YP_001900688.1 CDS Rpic_3134 NC_010682.1 3283071 3283817 R KEGG: rso:RSc2892 probable thiol:disulfide interchange protein; putative thiol:disulfide interchange protein complement(3283071..3283817) Ralstonia pickettii 12J 6286164 YP_001900689.1 CDS Rpic_3135 NC_010682.1 3283864 3285159 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rso:RSc2893 hypothetical protein; ubiquinone biosynthesis hydroxylase family protein complement(3283864..3285159) Ralstonia pickettii 12J 6286165 YP_001900690.1 CDS Rpic_3136 NC_010682.1 3285525 3285914 D KEGG: rso:RSc2894 hypothetical protein; hypothetical protein 3285525..3285914 Ralstonia pickettii 12J 6286166 YP_001900691.1 CDS Rpic_3137 NC_010682.1 3285925 3286263 D KEGG: rso:RSc2895 hypothetical signal peptide protein; hypothetical protein 3285925..3286263 Ralstonia pickettii 12J 6286167 YP_001900692.1 CDS Rpic_3138 NC_010682.1 3286288 3286761 D PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc2896 hypothetical protein; lytic transglycosylase catalytic subunit 3286288..3286761 Ralstonia pickettii 12J 6286057 YP_001900693.1 CDS Rpic_3139 NC_010682.1 3286793 3287170 R KEGG: rso:RSc2897 hypothetical protein; hypothetical protein complement(3286793..3287170) Ralstonia pickettii 12J 6286058 YP_001900694.1 CDS Rpic_3140 NC_010682.1 3287582 3288676 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3287582..3288676 Ralstonia pickettii 12J 6286059 YP_001900695.1 CDS Rpic_3141 NC_010682.1 3289015 3291303 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: psa:PST_4182 phytochrome family protein, putative; GAF sensor signal transduction histidine kinase 3289015..3291303 Ralstonia pickettii 12J 6286060 YP_001900696.1 CDS Rpic_3142 NC_010682.1 3291303 3291797 D PFAM: response regulator receiver; KEGG: ppf:Pput_3340 response regulator receiver protein; response regulator receiver protein 3291303..3291797 Ralstonia pickettii 12J 6288600 YP_001900697.1 CDS Rpic_3143 NC_010682.1 3291823 3293781 D KEGG: bxe:Bxe_A2317 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 3291823..3293781 Ralstonia pickettii 12J 6288601 YP_001900698.1 CDS Rpic_3144 NC_010682.1 3293812 3294054 R KEGG: rso:RSc2899 hypothetical protein; hypothetical protein complement(3293812..3294054) Ralstonia pickettii 12J 6288602 YP_001900699.1 CDS hemA NC_010682.1 3294275 3295582 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 3294275..3295582 Ralstonia pickettii 12J 6288603 YP_001900700.1 CDS prfA NC_010682.1 3295692 3296774 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3295692..3296774 Ralstonia pickettii 12J 6288691 YP_001900701.1 CDS Rpic_3147 NC_010682.1 3296956 3297324 D KEGG: rso:RSc2902 probable lipoprotein; putative lipoprotein 3296956..3297324 Ralstonia pickettii 12J 6288692 YP_001900702.1 CDS Rpic_3148 NC_010682.1 3297422 3298324 D TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: rso:RSc2903 probable methyltransferase protein; protein-(glutamine-N5) methyltransferase 3297422..3298324 Ralstonia pickettii 12J 6288693 YP_001900703.1 CDS Rpic_3149 NC_010682.1 3299425 3301122 D KEGG: rme:Rmet_0253 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (Reverse transcriptase); HNH endonuclease; Group II intron maturase-specific domain protein; SMART: HNH nuclease; RNA-directed DNA polymerase 3299425..3301122 Ralstonia pickettii 12J 6288694 YP_001900704.1 CDS Rpic_3150 NC_010682.1 3301278 3301589 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: rso:RSc2904 hypothetical protein; glutaredoxin-like protein 3301278..3301589 Ralstonia pickettii 12J 6287017 YP_001900705.1 CDS Rpic_3151 NC_010682.1 3301609 3302232 D catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3301609..3302232 Ralstonia pickettii 12J 6287018 YP_001900706.1 CDS Rpic_3152 NC_010682.1 3302255 3302425 R KEGG: rso:RSc2906 hypothetical protein; hypothetical protein complement(3302255..3302425) Ralstonia pickettii 12J 6287019 YP_001900707.1 CDS Rpic_3153 NC_010682.1 3302547 3303287 R KEGG: rso:RSc2907 hypothetical signal peptide protein; hypothetical protein complement(3302547..3303287) Ralstonia pickettii 12J 6287020 YP_001900708.1 CDS mdoG NC_010682.1 3303622 3305184 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 3303622..3305184 Ralstonia pickettii 12J 6288892 YP_001900709.1 CDS Rpic_3155 NC_010682.1 3305187 3307745 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 3305187..3307745 Ralstonia pickettii 12J 6288893 YP_001900710.1 CDS Rpic_3156 NC_010682.1 3307936 3308259 D KEGG: rso:RSc2910 probable signal peptide protein; putative signal peptide protein 3307936..3308259 Ralstonia pickettii 12J 6288894 YP_001900711.1 CDS Rpic_3157 NC_010682.1 3308422 3308910 D PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rso:RSc2911 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 3308422..3308910 Ralstonia pickettii 12J 6288895 YP_001900712.1 CDS Rpic_3158 NC_010682.1 3308920 3309144 D SMART: zinc finger CDGSH-type domain protein; KEGG: rso:RSc2912 hypothetical protein; zinc finger CDGSH-type domain-containing protein 3308920..3309144 Ralstonia pickettii 12J 6289766 YP_001900713.1 CDS Rpic_3159 NC_010682.1 3309141 3310808 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(3309141..3310808) Ralstonia pickettii 12J 6289767 YP_001900714.1 CDS Rpic_3160 NC_010682.1 3310957 3311325 R TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: rso:RSc2914 probable transmembrane cytochrome o ubiquinol oxidase (subunit IV) oxidoreductase protein; cytochrome o ubiquinol oxidase subunit IV complement(3310957..3311325) Ralstonia pickettii 12J 6289768 YP_001900715.1 CDS Rpic_3161 NC_010682.1 3311325 3311954 R TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: rso:RSc2915 probable transmembrane cytochrome o ubiquinol oxidase (subunit III) oxidoreductase protein; cytochrome o ubiquinol oxidase subunit III complement(3311325..3311954) Ralstonia pickettii 12J 6289769 YP_001900716.1 CDS Rpic_3162 NC_010682.1 3311958 3313934 R KEGG: rso:RSc2916 probable transmembrane cytochrome o ubiquinol oxidase (subunit I) oxidoreductase protein; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I complement(3311958..3313934) Ralstonia pickettii 12J 6288055 YP_001900717.1 CDS Rpic_3163 NC_010682.1 3313944 3314906 R TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: rso:RSc2917 probable transmembrane cytochrome o ubiquinol oxidase (subunit II) oxidoreductase protein; ubiquinol oxidase subunit II complement(3313944..3314906) Ralstonia pickettii 12J 6288056 YP_001900718.1 CDS Rpic_3164 NC_010682.1 3315564 3317207 R PFAM: natural resistance-associated macrophage protein; KEGG: rso:RSp0027 putative manganese transport transmembrane protein; natural resistance-associated macrophage protein complement(3315564..3317207) Ralstonia pickettii 12J 6288057 YP_001900719.1 CDS Rpic_3165 NC_010682.1 3317236 3317442 R KEGG: rso:RS02001 hypothetical protein; hypothetical protein complement(3317236..3317442) Ralstonia pickettii 12J 6288058 YP_001900720.1 CDS Rpic_3166 NC_010682.1 3317675 3319123 R PFAM: Carbohydrate-selective porin OprB; KEGG: reu:Reut_A0411 hypothetical protein; Carbohydrate-selective porin OprB complement(3317675..3319123) Ralstonia pickettii 12J 6288994 YP_001900721.1 CDS Rpic_3167 NC_010682.1 3319597 3319926 D KEGG: bch:Bcen2424_1354 hypothetical protein; hypothetical protein 3319597..3319926 Ralstonia pickettii 12J 6288995 YP_001900722.1 CDS Rpic_3168 NC_010682.1 3320311 3320427 D hypothetical protein 3320311..3320427 Ralstonia pickettii 12J 6288996 YP_001900723.1 CDS Rpic_3169 NC_010682.1 3320534 3320830 D PFAM: plasmid maintenance system killer; KEGG: xfa:XF1709 hypothetical protein; plasmid maintenance system killer protein 3320534..3320830 Ralstonia pickettii 12J 6288997 YP_001900724.1 CDS Rpic_3170 NC_010682.1 3320844 3321974 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: xfa:XF1708 hypothetical protein; XRE family plasmid maintenance system antidote protein 3320844..3321974 Ralstonia pickettii 12J 6288845 YP_001900725.1 CDS Rpic_3171 NC_010682.1 3321984 3322454 D KEGG: xfa:XF1707 hypothetical protein; hypothetical protein 3321984..3322454 Ralstonia pickettii 12J 6288846 YP_001900726.1 CDS Rpic_3172 NC_010682.1 3322510 3325497 R KEGG: neu:NE2527 restriction enzyme type I helicase subunits and related helicases; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease complement(3322510..3325497) Ralstonia pickettii 12J 6288847 YP_001900727.1 CDS Rpic_3173 NC_010682.1 3325497 3326681 R KEGG: ajs:Ajs_3607 restriction modification system, type I; restriction modification system complement(3325497..3326681) Ralstonia pickettii 12J 6288848 YP_001900728.1 CDS Rpic_3174 NC_010682.1 3326681 3328354 R PFAM: UvrD/REP helicase; KEGG: sbm:Shew185_4279 UvrD/REP helicase; UvrD/REP helicase complement(3326681..3328354) Ralstonia pickettii 12J 6286757 YP_001900729.1 CDS Rpic_3175 NC_010682.1 3328351 3330255 R PFAM: SMC domain protein; KEGG: sbn:Sbal195_4418 ATP-dependent endonuclease of the OLD family; SMC domain-containing protein complement(3328351..3330255) Ralstonia pickettii 12J 6286758 YP_001900730.1 CDS Rpic_3176 NC_010682.1 3330252 3331763 R PFAM: putative RNA methylase; N-6 DNA methylase; KEGG: ajs:Ajs_3609 N-6 DNA methylase; N-6 DNA methylase complement(3330252..3331763) Ralstonia pickettii 12J 6286759 YP_001900731.1 CDS Rpic_3177 NC_010682.1 3331760 3332551 R KEGG: dar:Daro_0796 hypothetical protein; hypothetical protein complement(3331760..3332551) Ralstonia pickettii 12J 6286760 YP_001900732.1 CDS Rpic_3178 NC_010682.1 3332548 3334044 R PFAM: N-6 DNA methylase; KEGG: ajs:Ajs_3610 N-6 DNA methylase; N-6 DNA methylase complement(3332548..3334044) Ralstonia pickettii 12J 6287335 YP_001900733.1 CDS Rpic_3179 NC_010682.1 3334408 3334695 R TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: bch:Bcen2424_0140 addiction module toxin, RelE/StbE family; RelE/StbE family addiction module toxin complement(3334408..3334695) Ralstonia pickettii 12J 6287336 YP_001900734.1 CDS Rpic_3180 NC_010682.1 3334692 3335150 R KEGG: bch:Bcen2424_0139 hypothetical protein; hypothetical protein complement(3334692..3335150) Ralstonia pickettii 12J 6287337 YP_001900735.1 CDS Rpic_3181 NC_010682.1 3335347 3335577 D hypothetical protein 3335347..3335577 Ralstonia pickettii 12J 6287338 YP_001900736.1 CDS Rpic_3182 NC_010682.1 3335574 3335828 D hypothetical protein 3335574..3335828 Ralstonia pickettii 12J 6287257 YP_001900737.1 CDS Rpic_3183 NC_010682.1 3335872 3336597 D KEGG: bur:Bcep18194_A4982 hypothetical protein; hypothetical protein 3335872..3336597 Ralstonia pickettii 12J 6287258 YP_001900738.1 CDS Rpic_3184 NC_010682.1 3336772 3337167 R hypothetical protein complement(3336772..3337167) Ralstonia pickettii 12J 6287259 YP_001900739.1 CDS Rpic_3185 NC_010682.1 3337164 3337676 R KEGG: pol:Bpro_2508 hypothetical protein; hypothetical protein complement(3337164..3337676) Ralstonia pickettii 12J 6287260 YP_001900740.1 CDS Rpic_3186 NC_010682.1 3337777 3337995 R hypothetical protein complement(3337777..3337995) Ralstonia pickettii 12J 6289762 YP_001900741.1 CDS Rpic_3187 NC_010682.1 3338908 3339087 D hypothetical protein 3338908..3339087 Ralstonia pickettii 12J 6289763 YP_001900742.1 CDS Rpic_3188 NC_010682.1 3340082 3340870 R KEGG: pde:Pden_3127 peptidase C24, Calicivirus polyprotein ORF 1; peptidase C24, Calicivirus polyprotein ORF 1 complement(3340082..3340870) Ralstonia pickettii 12J 6289764 YP_001900743.1 CDS Rpic_3189 NC_010682.1 3341327 3342040 D KEGG: bxe:Bxe_A3649 hypothetical protein; hypothetical protein 3341327..3342040 Ralstonia pickettii 12J 6289765 YP_001900744.1 CDS Rpic_3190 NC_010682.1 3342075 3343106 R KEGG: xcv:XCV1966 hypothetical protein; hypothetical protein complement(3342075..3343106) Ralstonia pickettii 12J 6289707 YP_001900745.1 CDS Rpic_3191 NC_010682.1 3343250 3345022 R KEGG: bam:Bamb_6625 TrbL/VirB6 plasmid conjugal transfer protein; hypothetical protein complement(3343250..3345022) Ralstonia pickettii 12J 6289708 YP_001900746.1 CDS Rpic_3192 NC_010682.1 3345025 3345309 R hypothetical protein complement(3345025..3345309) Ralstonia pickettii 12J 6289709 YP_001900747.1 CDS Rpic_3193 NC_010682.1 3345327 3346070 R TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: nha:Nham_4565 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ complement(3345327..3346070) Ralstonia pickettii 12J 6289710 YP_001900748.1 CDS Rpic_3194 NC_010682.1 3346079 3346261 R hypothetical protein complement(3346079..3346261) Ralstonia pickettii 12J 6287936 YP_001900749.1 CDS Rpic_3195 NC_010682.1 3346281 3347174 R hypothetical protein complement(3346281..3347174) Ralstonia pickettii 12J 6287937 YP_001900750.1 CDS Rpic_3196 NC_010682.1 3347216 3347416 R hypothetical protein complement(3347216..3347416) Ralstonia pickettii 12J 6287938 YP_001900751.1 CDS Rpic_3197 NC_010682.1 3347639 3347932 R hypothetical protein complement(3347639..3347932) Ralstonia pickettii 12J 6287939 YP_001900752.1 CDS Rpic_3198 NC_010682.1 3348012 3348965 R KEGG: bbr:BB0495 hypothetical protein; hypothetical protein complement(3348012..3348965) Ralstonia pickettii 12J 6287384 YP_001900753.1 CDS Rpic_3199 NC_010682.1 3348968 3349183 R KEGG: abo:ABO_2067 hypothetical protein; hypothetical protein complement(3348968..3349183) Ralstonia pickettii 12J 6287385 YP_001900754.1 CDS Rpic_3200 NC_010682.1 3349377 3350021 D hypothetical protein 3349377..3350021 Ralstonia pickettii 12J 6287386 YP_001900755.1 CDS Rpic_3201 NC_010682.1 3349996 3351051 R PFAM: integrase family protein; KEGG: bch:Bcen2424_0446 phage integrase family protein; integrase family protein complement(3349996..3351051) Ralstonia pickettii 12J 6287387 YP_001900756.1 CDS Rpic_3202 NC_010682.1 3351254 3351751 R PFAM: Stringent starvation protein B; KEGG: rso:RSc2925 ClpXP protease specificity-enhancing factor; ClpXP protease specificity-enhancing factor complement(3351254..3351751) Ralstonia pickettii 12J 6286162 YP_001900757.1 CDS Rpic_3203 NC_010682.1 3351822 3352433 R PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2926 putative transcription modulator protein; glutathione S-transferase domain-containing protein complement(3351822..3352433) Ralstonia pickettii 12J 6286163 YP_001900758.1 CDS Rpic_3204 NC_010682.1 3352584 3353327 R PFAM: cytochrome c1; KEGG: rso:RSc2927 putative cytochrome c1 precursor transmembrane protein; cytochrome c1 complement(3352584..3353327) Ralstonia pickettii 12J 6289679 YP_001900759.1 CDS Rpic_3205 NC_010682.1 3353365 3354765 R PFAM: Cytochrome b/b6 domain; KEGG: rso:RSc2928 putative cytochrome b subunit transmembrane protein; Cytochrome b/b6 domain complement(3353365..3354765) Ralstonia pickettii 12J 6289680 YP_001900760.1 CDS Rpic_3206 NC_010682.1 3354768 3355376 R KEGG: rso:RSc2929 putative transmembrane ubiquinol-cytochrome c reductase (iron-sulfur subunit) oxidoreductase protein; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(3354768..3355376) Ralstonia pickettii 12J 6289681 YP_001900761.1 CDS mscL NC_010682.1 3355622 3356050 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 3355622..3356050 Ralstonia pickettii 12J 6289682 YP_001900762.1 CDS Rpic_3208 NC_010682.1 3356063 3356809 R PFAM: protein of unknown function DUF34; KEGG: rso:RSc2931 hypothetical protein; hypothetical protein complement(3356063..3356809) Ralstonia pickettii 12J 6289151 YP_001900763.1 CDS Rpic_3209 NC_010682.1 3356829 3358043 D KEGG: rso:RSc2932 probable HtrA-like serine protease signal peptide protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 3356829..3358043 Ralstonia pickettii 12J 6289152 YP_001900764.1 CDS Rpic_3210 NC_010682.1 3358489 3359595 R PFAM: porin Gram-negative type; KEGG: rso:RSc2933 putative porin signal peptide protein; porin complement(3358489..3359595) Ralstonia pickettii 12J 6289153 YP_001900765.1 CDS Rpic_3211 NC_010682.1 3359930 3361072 R PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc2934 hypothetical protein; family 1 extracellular solute-binding protein complement(3359930..3361072) Ralstonia pickettii 12J 6289154 YP_001900766.1 CDS Rpic_3212 NC_010682.1 3361192 3361893 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc2935 putative response regulator transcription regulator protein; winged helix family two component transcriptional regulator 3361192..3361893 Ralstonia pickettii 12J 6286374 YP_001900767.1 CDS Rpic_3213 NC_010682.1 3361890 3363419 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: rso:RSc2936 putative transmembrane sensor kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase 3361890..3363419 Ralstonia pickettii 12J 6286375 YP_001900768.1 CDS Rpic_3214 NC_010682.1 3363542 3364648 D PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc2937 putative periplasmic iron-binding signal peptide protein; family 1 extracellular solute-binding protein 3363542..3364648 Ralstonia pickettii 12J 6286376 YP_001900769.1 CDS Rpic_3215 NC_010682.1 3364743 3366554 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2938 putative transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3364743..3366554 Ralstonia pickettii 12J 6286377 YP_001900770.1 CDS Rpic_3216 NC_010682.1 3366547 3367632 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2939 probable ATP-binding ABC transporter protein; ABC transporter-like protein 3366547..3367632 Ralstonia pickettii 12J 6286910 YP_001900771.1 CDS Rpic_3217 NC_010682.1 3367720 3368523 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rso:RSc2940 putative sec-independent translocase protein TatC transmembrane; Sec-independent protein translocase subunit TatC complement(3367720..3368523) Ralstonia pickettii 12J 6286911 YP_001900772.1 CDS tatB NC_010682.1 3368585 3369097 R TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rso:RSc2941 sec-independent translocase; sec-independent translocase complement(3368585..3369097) Ralstonia pickettii 12J 6286912 YP_001900773.1 CDS tatA NC_010682.1 3369119 3369376 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(3369119..3369376) Ralstonia pickettii 12J 6286913 YP_001900774.1 CDS Rpic_3220 NC_010682.1 3369439 3369813 R KEGG: rso:RSc2943 probable transmembrane protein; hypothetical protein complement(3369439..3369813) Ralstonia pickettii 12J 6286061 YP_001900775.1 CDS hisE NC_010682.1 3369845 3370219 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(3369845..3370219) Ralstonia pickettii 12J 6286062 YP_001900776.1 CDS hisI NC_010682.1 3370212 3370634 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(3370212..3370634) Ralstonia pickettii 12J 6286063 YP_001900777.1 CDS Rpic_3223 NC_010682.1 3370631 3371407 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(3370631..3371407) Ralstonia pickettii 12J 6286064 YP_001900778.1 CDS Rpic_3224 NC_010682.1 3371455 3372198 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(3371455..3372198) Ralstonia pickettii 12J 6287347 YP_001900779.1 CDS hisH NC_010682.1 3372272 3372925 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(3372272..3372925) Ralstonia pickettii 12J 6287348 YP_001900780.1 CDS Rpic_3226 NC_010682.1 3372934 3373557 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: rso:RSc2949 probable transmembrane protein; multiple antibiotic resistance (MarC)-like protein complement(3372934..3373557) Ralstonia pickettii 12J 6287349 YP_001900781.1 CDS hisB NC_010682.1 3373612 3374202 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(3373612..3374202) Ralstonia pickettii 12J 6287350 YP_001900782.1 CDS Rpic_3228 NC_010682.1 3374199 3375323 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(3374199..3375323) Ralstonia pickettii 12J 6286801 YP_001900783.1 CDS hisD NC_010682.1 3375340 3376668 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(3375340..3376668) Ralstonia pickettii 12J 6286802 YP_001900784.1 CDS hisG NC_010682.1 3376665 3377354 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(3376665..3377354) Ralstonia pickettii 12J 6286803 YP_001900785.1 CDS Rpic_3231 NC_010682.1 3377374 3378738 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3377374..3378738) Ralstonia pickettii 12J 6286804 YP_001900786.1 CDS Rpic_3232 NC_010682.1 3378738 3378980 R PFAM: BolA family protein; KEGG: rso:RSc2954 hypothetical protein; BolA family protein complement(3378738..3378980) Ralstonia pickettii 12J 6287272 YP_001900787.1 CDS Rpic_3233 NC_010682.1 3379034 3379822 R PFAM: ABC-2 type transporter; KEGG: rso:RSc2955 probable transmembrane protein; ABC-2 type transporter complement(3379034..3379822) Ralstonia pickettii 12J 6287273 YP_001900788.1 CDS Rpic_3234 NC_010682.1 3379819 3380784 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2956 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(3379819..3380784) Ralstonia pickettii 12J 6287274 YP_001900789.1 CDS Rpic_3235 NC_010682.1 3381034 3381345 R KEGG: rso:RSc2957 putative signal peptide protein; putative signal peptide protein complement(3381034..3381345) Ralstonia pickettii 12J 6287275 YP_001900790.1 CDS Rpic_3236 NC_010682.1 3381420 3382055 R PFAM: toluene tolerance family protein; KEGG: rso:RSc2958 probable signal peptide protein; toluene tolerance family protein complement(3381420..3382055) Ralstonia pickettii 12J 6286727 YP_001900791.1 CDS Rpic_3237 NC_010682.1 3382208 3383011 R PFAM: VacJ family lipoprotein; KEGG: rso:RSc2959 probable lipoprotein precursor (VacJ) transmembrane; VacJ family lipoprotein complement(3382208..3383011) Ralstonia pickettii 12J 6286728 YP_001900792.1 CDS Rpic_3238 NC_010682.1 3383008 3383535 R PFAM: Mammalian cell entry related domain protein; KEGG: rso:RSc2960 probable signal peptide protein; mammalian cell entry domain-containing protein complement(3383008..3383535) Ralstonia pickettii 12J 6286729 YP_001900793.1 CDS Rpic_3239 NC_010682.1 3383573 3384340 R PFAM: protein of unknown function DUF140; KEGG: rso:RSc2961 probable transmembrane protein; hypothetical protein complement(3383573..3384340) Ralstonia pickettii 12J 6286730 YP_001900794.1 CDS Rpic_3240 NC_010682.1 3384337 3385170 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc2962 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(3384337..3385170) Ralstonia pickettii 12J 6289017 YP_001900795.1 CDS Rpic_3241 NC_010682.1 3385439 3386479 R PFAM: conserved hypothetical protein; KEGG: rso:RSc2963 hypothetical protein; hypothetical protein complement(3385439..3386479) Ralstonia pickettii 12J 6289018 YP_001900796.1 CDS gltD NC_010682.1 3386671 3388134 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(3386671..3388134) Ralstonia pickettii 12J 6289019 YP_001900797.1 CDS Rpic_3243 NC_010682.1 3388275 3393074 R PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rso:RSc2965 probable glutamate synthase (large subunit) oxidoreductase protein; glutamate synthase complement(3388275..3393074) Ralstonia pickettii 12J 6289020 YP_001900798.1 CDS Rpic_3244 NC_010682.1 3393257 3393982 R PFAM: protein of unknown function DUF1568; KEGG: rso:RSc2966 hypothetical protein; hypothetical protein complement(3393257..3393982) Ralstonia pickettii 12J 6288291 YP_001900799.1 CDS Rpic_3245 NC_010682.1 3394232 3394906 D PFAM: OmpW family protein; KEGG: rso:RSc2967 probable outer membrane signal peptide protein; OmpW family protein 3394232..3394906 Ralstonia pickettii 12J 6288292 YP_001900800.1 CDS Rpic_3246 NC_010682.1 3395126 3396292 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(3395126..3396292) Ralstonia pickettii 12J 6288293 YP_001900801.1 CDS aroB NC_010682.1 3396313 3397419 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(3396313..3397419) Ralstonia pickettii 12J 6288294 YP_001900802.1 CDS aroK NC_010682.1 3397416 3397955 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(3397416..3397955) Ralstonia pickettii 12J 6287133 YP_001900803.1 CDS Rpic_3249 NC_010682.1 3398127 3400292 R TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: rso:RSc2971 probable fimbrial type-4 assembly signal peptide protein; type IV pilus secretin PilQ complement(3398127..3400292) Ralstonia pickettii 12J 6287134 YP_001900804.1 CDS Rpic_3250 NC_010682.1 3400289 3400834 R PFAM: Pilus assembly protein PilP; KEGG: rso:RSc2972 probable fimbrial type-4 assembly lipoprotein; Pilus assembly protein PilP complement(3400289..3400834) Ralstonia pickettii 12J 6287135 YP_001900805.1 CDS Rpic_3251 NC_010682.1 3400831 3401490 R PFAM: Pilus assembly protein PilO; KEGG: rso:RSc2973 probable fimbrial type-4 assembly membrane transmembrane protein; Pilus assembly protein PilO complement(3400831..3401490) Ralstonia pickettii 12J 6287136 YP_001900806.1 CDS Rpic_3252 NC_010682.1 3401493 3402125 R PFAM: Fimbrial assembly family protein; KEGG: rso:RSc2974 probable fimbrial type-4 assembly membrane transmembrane protein; fimbrial assembly family protein complement(3401493..3402125) Ralstonia pickettii 12J 6288509 YP_001900807.1 CDS Rpic_3253 NC_010682.1 3402136 3403221 R TIGRFAM: type IV pilus assembly protein PilM; KEGG: rso:RSc2975 probable fimbrial type-4 assembly protein; type IV pilus assembly protein PilM complement(3402136..3403221) Ralstonia pickettii 12J 6288510 YP_001900808.1 CDS Rpic_3254 NC_010682.1 3403740 3406073 D KEGG: rso:RSc2976 probable penicillin-binding 1 (peptidoglycan synthetase) transmembrane protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 3403740..3406073 Ralstonia pickettii 12J 6288511 YP_001900809.1 CDS cyaY NC_010682.1 3406144 3406488 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(3406144..3406488) Ralstonia pickettii 12J 6288512 YP_001900810.1 CDS Rpic_3256 NC_010682.1 3406626 3406859 D KEGG: rso:RSc2978 probable proline-rich transmembrane protein; putative proline-rich transmembrane protein 3406626..3406859 Ralstonia pickettii 12J 6287888 YP_001900811.1 CDS Rpic_3257 NC_010682.1 3406911 3408182 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rso:RSc2979 probable diaminopimelate decarboxylase protein; diaminopimelate decarboxylase 3406911..3408182 Ralstonia pickettii 12J 6287889 YP_001900812.1 CDS Rpic_3258 NC_010682.1 3408244 3408900 R in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ complement(3408244..3408900) Ralstonia pickettii 12J 6287890 YP_001900813.1 CDS Rpic_3259 NC_010682.1 3408908 3409903 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY complement(3408908..3409903) Ralstonia pickettii 12J 6287891 YP_001900814.1 CDS Rpic_3260 NC_010682.1 3410000 3410860 R KEGG: rso:RSc2982 probable transmembrane protein; putative transmembrane anti-sigma factor complement(3410000..3410860) Ralstonia pickettii 12J 6286223 YP_001900815.1 CDS Rpic_3261 NC_010682.1 3410869 3411441 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rso:RSc2983 probable RNA polymerase sigma-E factor (sigma-24) transcription regulator protein; ECF subfamily RNA polymerase sigma-24 subunit complement(3410869..3411441) Ralstonia pickettii 12J 6286224 YP_001900816.1 CDS Rpic_3262 NC_010682.1 3411467 3411895 R PFAM: Secreted repeat of unknown function; KEGG: rso:RSc2984 probable transmembrane protein; hypothetical protein complement(3411467..3411895) Ralstonia pickettii 12J 6286225 YP_001900817.1 CDS Rpic_3263 NC_010682.1 3412002 3413189 R TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: rso:RSc2985 putative transmembrane cytochrome c-type biogenesis transmembrane protein; cytochrome c-type biogenesis protein CcsB complement(3412002..3413189) Ralstonia pickettii 12J 6286226 YP_001900818.1 CDS Rpic_3264 NC_010682.1 3413197 3415401 R PFAM: ResB family protein; KEGG: rso:RSc2986 putative cytochrome c-type biogenesis transmembrane protein; ResB family protein complement(3413197..3415401) Ralstonia pickettii 12J 6288051 YP_001900819.1 CDS Rpic_3265 NC_010682.1 3415514 3416173 R PFAM: cytochrome c class I; KEGG: rso:RSc2987 probable oxidoreductase cytochrome c-type signal peptide protein; cytochrome c class I complement(3415514..3416173) Ralstonia pickettii 12J 6288052 YP_001900820.1 CDS engB NC_010682.1 3416430 3417131 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3416430..3417131 Ralstonia pickettii 12J 6288053 YP_001900821.1 CDS Rpic_3267 NC_010682.1 3417282 3418277 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3417282..3418277 Ralstonia pickettii 12J 6288054 YP_001900822.1 CDS Rpic_3268 NC_010682.1 3418278 3420095 R PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: rso:RSc2990 probable thiol:disulfide interchange transmembrane protein; Protein-disulfide reductase complement(3418278..3420095) Ralstonia pickettii 12J 6289049 YP_001900823.1 CDS Rpic_3269 NC_010682.1 3420114 3420452 R PFAM: CutA1 divalent ion tolerance protein; KEGG: rso:RSc2991 probable periplasmic divalent cation tolerance protein; CutA1 divalent ion tolerance protein complement(3420114..3420452) Ralstonia pickettii 12J 6289050 YP_001900824.1 CDS rplQ NC_010682.1 3420608 3421006 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3420608..3421006) Ralstonia pickettii 12J 6289051 YP_001900825.1 CDS Rpic_3271 NC_010682.1 3421161 3422141 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3421161..3422141) Ralstonia pickettii 12J 6289052 YP_001900826.1 CDS rpsD NC_010682.1 3422381 3423004 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3422381..3423004) Ralstonia pickettii 12J 6287943 YP_001900827.1 CDS Rpic_3273 NC_010682.1 3423208 3423609 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(3423208..3423609) Ralstonia pickettii 12J 6287944 YP_001900828.1 CDS rpsM NC_010682.1 3423634 3423999 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(3423634..3423999) Ralstonia pickettii 12J 6287945 YP_001900829.1 CDS rpmJ NC_010682.1 3424021 3424137 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3424021..3424137) Ralstonia pickettii 12J 6287946 YP_001900830.1 CDS infA NC_010682.1 3424168 3424386 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(3424168..3424386) Ralstonia pickettii 12J 6287424 YP_001900831.1 CDS secY NC_010682.1 3424413 3425735 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3424413..3425735) Ralstonia pickettii 12J 6287425 YP_001900832.1 CDS rplO NC_010682.1 3425793 3426224 R late assembly protein; 50S ribosomal protein L15 complement(3425793..3426224) Ralstonia pickettii 12J 6287426 YP_001900833.1 CDS rpmD NC_010682.1 3426243 3426425 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3426243..3426425) Ralstonia pickettii 12J 6287427 YP_001900834.1 CDS rpsE NC_010682.1 3426448 3426966 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3426448..3426966) Ralstonia pickettii 12J 6288295 YP_001900835.1 CDS rplR NC_010682.1 3426988 3427344 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3426988..3427344) Ralstonia pickettii 12J 6288296 YP_001900836.1 CDS rplF NC_010682.1 3427356 3427889 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3427356..3427889) Ralstonia pickettii 12J 6288297 YP_001900837.1 CDS rpsH NC_010682.1 3427902 3428297 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3427902..3428297) Ralstonia pickettii 12J 6288298 YP_001900838.1 CDS rpsN NC_010682.1 3428325 3428630 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(3428325..3428630) Ralstonia pickettii 12J 6288210 YP_001900839.1 CDS rplE NC_010682.1 3428640 3429182 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3428640..3429182) Ralstonia pickettii 12J 6288211 YP_001900840.1 CDS rplX NC_010682.1 3429209 3429517 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3429209..3429517) Ralstonia pickettii 12J 6288212 YP_001900841.1 CDS rplN NC_010682.1 3429529 3429897 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3429529..3429897) Ralstonia pickettii 12J 6288213 YP_001900842.1 CDS rpsQ NC_010682.1 3430166 3430435 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3430166..3430435) Ralstonia pickettii 12J 6288564 YP_001900843.1 CDS Rpic_3289 NC_010682.1 3430432 3430626 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3430432..3430626) Ralstonia pickettii 12J 6288565 YP_001900844.1 CDS rplP NC_010682.1 3430639 3431055 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3430639..3431055) Ralstonia pickettii 12J 6288566 YP_001900845.1 CDS rpsC NC_010682.1 3431058 3431846 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3431058..3431846) Ralstonia pickettii 12J 6288567 YP_001900846.1 CDS rplV NC_010682.1 3431856 3432185 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3431856..3432185) Ralstonia pickettii 12J 6288627 YP_001900847.1 CDS rpsS NC_010682.1 3432195 3432470 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3432195..3432470) Ralstonia pickettii 12J 6288628 YP_001900848.1 CDS rplB NC_010682.1 3432492 3433322 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(3432492..3433322) Ralstonia pickettii 12J 6288629 YP_001900849.1 CDS rplW NC_010682.1 3433325 3433639 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3433325..3433639) Ralstonia pickettii 12J 6288630 YP_001900850.1 CDS rplD NC_010682.1 3433636 3434256 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3433636..3434256) Ralstonia pickettii 12J 6289656 YP_001900851.1 CDS rplC NC_010682.1 3434268 3434921 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(3434268..3434921) Ralstonia pickettii 12J 6289657 YP_001900852.1 CDS rpsJ NC_010682.1 3435207 3435518 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(3435207..3435518) Ralstonia pickettii 12J 6289658 YP_001900853.1 CDS Rpic_3299 NC_010682.1 3435626 3436834 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3435626..3436834) Ralstonia pickettii 12J 6289659 YP_001900854.1 CDS Rpic_3300 NC_010682.1 3436917 3439088 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3436917..3439088) Ralstonia pickettii 12J 6287555 YP_001900855.1 CDS Rpic_3301 NC_010682.1 3439203 3439673 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3439203..3439673) Ralstonia pickettii 12J 6287556 YP_001900856.1 CDS rpsL NC_010682.1 3439860 3440237 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(3439860..3440237) Ralstonia pickettii 12J 6287557 YP_001900857.1 CDS Rpic_3303 NC_010682.1 3440535 3441794 R PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr2264 probable antibiotic resistance protein; major facilitator superfamily protein complement(3440535..3441794) Ralstonia pickettii 12J 6287558 YP_001900858.1 CDS Rpic_3304 NC_010682.1 3441894 3442814 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cps:CPS_3497 transcriptional regulator, LysR family; LysR family transcriptional regulator 3441894..3442814 Ralstonia pickettii 12J 6288445 YP_001900859.1 CDS Rpic_3305 NC_010682.1 3442811 3444724 R KEGG: rso:RSc3025 probable ATP-dependent DNA helicase protein; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ complement(3442811..3444724) Ralstonia pickettii 12J 6288446 YP_001900860.1 CDS Rpic_3306 NC_010682.1 3444837 3445427 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc3026 hypothetical protein; type 12 methyltransferase complement(3444837..3445427) Ralstonia pickettii 12J 6288447 YP_001900861.1 CDS Rpic_3307 NC_010682.1 3445435 3446277 R KEGG: rso:RSc3027 probable signal peptide protein; putative signal peptide protein complement(3445435..3446277) Ralstonia pickettii 12J 6288448 YP_001900862.1 CDS Rpic_3308 NC_010682.1 3446288 3447091 R KEGG: rso:RSc3028 putative signal peptide protein; putative signal peptide protein complement(3446288..3447091) Ralstonia pickettii 12J 6286464 YP_001900863.1 CDS Rpic_3309 NC_010682.1 3447088 3448809 R KEGG: rso:RSc3029 putative signal peptide protein; putative signal peptide protein complement(3447088..3448809) Ralstonia pickettii 12J 6286465 YP_001900864.1 CDS Rpic_3310 NC_010682.1 3448817 3453601 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: rso:RSc3030 putative signal peptide protein; alpha-2-macroglobulin domain-containing protein complement(3448817..3453601) Ralstonia pickettii 12J 6286466 YP_001900865.1 CDS Rpic_3311 NC_010682.1 3453610 3454314 R PFAM: protein of unknown function DUF1175; KEGG: rso:RSc3031 hypothetical protein; hypothetical protein complement(3453610..3454314) Ralstonia pickettii 12J 6286467 YP_001900866.1 CDS Rpic_3312 NC_010682.1 3454311 3456161 R KEGG: rso:RSc3032 hypothetical protein; hypothetical protein complement(3454311..3456161) Ralstonia pickettii 12J 6287904 YP_001900867.1 CDS Rpic_3313 NC_010682.1 3456421 3460650 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3456421..3460650) Ralstonia pickettii 12J 6287905 YP_001900868.1 CDS rpoB NC_010682.1 3460778 3464884 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3460778..3464884) Ralstonia pickettii 12J 6287906 YP_001900869.1 CDS rplL NC_010682.1 3465334 3465708 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(3465334..3465708) Ralstonia pickettii 12J 6287907 YP_001900870.1 CDS rplJ NC_010682.1 3465772 3466278 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3465772..3466278) Ralstonia pickettii 12J 6287009 YP_001900871.1 CDS rplA NC_010682.1 3466654 3467349 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3466654..3467349) Ralstonia pickettii 12J 6287010 YP_001900872.1 CDS rplK NC_010682.1 3467352 3467783 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3467352..3467783) Ralstonia pickettii 12J 6287011 YP_001900873.1 CDS nusG NC_010682.1 3467960 3468544 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(3467960..3468544) Ralstonia pickettii 12J 6287012 YP_001900874.1 CDS secE NC_010682.1 3468557 3468937 R forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3468557..3468937) Ralstonia pickettii 12J 6289270 YP_001900875.1 CDS Rpic_3321 NC_010682.1 3469162 3470352 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3469162..3470352) Ralstonia pickettii 12J 6289272 YP_001900876.1 CDS Rpic_3322 NC_010682.1 3471147 3472676 R PFAM: transposase IS66; KEGG: bxe:Bxe_B1865 transposase IS66 family; transposase IS66 complement(3471147..3472676) Ralstonia pickettii 12J 6289244 YP_001900877.1 CDS Rpic_3323 NC_010682.1 3472739 3473029 R PFAM: IS66 Orf2 family protein; KEGG: ajs:Ajs_2917 IS66 Orf2 family protein; IS66 Orf2 family protein complement(3472739..3473029) Ralstonia pickettii 12J 6289245 YP_001900878.1 CDS Rpic_3324 NC_010682.1 3473071 3473358 R KEGG: bxe:Bxe_B1867 hypothetical protein; hypothetical protein complement(3473071..3473358) Ralstonia pickettii 12J 6286739 YP_001900879.1 CDS Rpic_3325 NC_010682.1 3479314 3480174 R PFAM: CHAD domain containing protein; KEGG: rso:RSc3043 hypothetical protein; CHAD domain-containing protein complement(3479314..3480174) Ralstonia pickettii 12J 6287101 YP_001900880.1 CDS Rpic_3326 NC_010682.1 3480284 3481057 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rso:RSc3044 probable glycerol-3-phosphate regulon repressor transcription regulator protein; DeoR family transcriptional regulator complement(3480284..3481057) Ralstonia pickettii 12J 6287102 YP_001900881.1 CDS glpD NC_010682.1 3481201 3482778 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 3481201..3482778 Ralstonia pickettii 12J 6287103 YP_001900882.1 CDS Rpic_3328 NC_010682.1 3482845 3483963 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc3046 putative sugar-phosphate ATP-binding ABC transporter protein; ABC transporter-like protein 3482845..3483963 Ralstonia pickettii 12J 6287104 YP_001900883.1 CDS Rpic_3329 NC_010682.1 3483950 3485047 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc3047 probable ATP-binding ABC transporter protein; ABC transporter-like protein 3483950..3485047 Ralstonia pickettii 12J 6286735 YP_001900884.1 CDS Rpic_3330 NC_010682.1 3485044 3485934 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc3048 probable sugar-phosphate transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3485044..3485934 Ralstonia pickettii 12J 6286736 YP_001900885.1 CDS Rpic_3331 NC_010682.1 3485927 3486760 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc3049 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3485927..3486760 Ralstonia pickettii 12J 6286737 YP_001900886.1 CDS Rpic_3332 NC_010682.1 3486783 3487064 D KEGG: rso:RSc3050 probable transmembrane protein; hypothetical protein 3486783..3487064 Ralstonia pickettii 12J 6286738 YP_001900887.1 CDS Rpic_3333 NC_010682.1 3487236 3488972 D KEGG: rso:RSc3051 hypothetical signal peptide protein; hypothetical protein 3487236..3488972 Ralstonia pickettii 12J 6286281 YP_001900888.1 CDS Rpic_3334 NC_010682.1 3489086 3490582 D TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: rso:RSc3052 probable ATP:glycerol 3-phosphotransferase protein; glycerol kinase 3489086..3490582 Ralstonia pickettii 12J 6286282 YP_001900889.1 CDS Rpic_3335 NC_010682.1 3490650 3491015 R KEGG: rso:RSc3053 hypothetical signal peptide protein; hypothetical protein complement(3490650..3491015) Ralstonia pickettii 12J 6286283 YP_001900890.1 CDS Rpic_3336 NC_010682.1 3491206 3491832 D PFAM: protein of unknown function DUF1415; KEGG: rso:RSc3054 hypothetical protein; hypothetical protein 3491206..3491832 Ralstonia pickettii 12J 6286284 YP_001900891.1 CDS mdoD NC_010682.1 3492117 3493799 R involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D complement(3492117..3493799) Ralstonia pickettii 12J 6289463 YP_001900892.1 CDS Rpic_3338 NC_010682.1 3494006 3495247 D PFAM: N-acylglucosamine 2-epimerase; KEGG: rso:RSc3058 probable mannose-6-phosphate isomerase protein; N-acylglucosamine 2-epimerase 3494006..3495247 Ralstonia pickettii 12J 6289464 YP_001900893.1 CDS Rpic_3339 NC_010682.1 3495244 3496557 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSc3059 probable sugar transporter transmembrane protein; major facilitator superfamily metabolite/H+ symporter 3495244..3496557 Ralstonia pickettii 12J 6289465 YP_001900894.1 CDS Rpic_3340 NC_010682.1 3497234 3498418 R PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc3061 probable substrate-binding periplasmic (PBP) ABC transporter protein; extracellular ligand-binding receptor complement(3497234..3498418) Ralstonia pickettii 12J 6289466 YP_001900895.1 CDS Rpic_3341 NC_010682.1 3498612 3499409 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: rso:RSc3062 probable transcription regulator protein; AraC family transcriptional regulator 3498612..3499409 Ralstonia pickettii 12J 6288533 YP_001900896.1 CDS Rpic_3343 NC_010682.1 3499802 3500722 R KEGG: bvi:Bcep1808_4988 alpha/beta hydrolase-like protein; alpha/beta hydrolase-like protein complement(3499802..3500722) Ralstonia pickettii 12J 6288535 YP_001900897.1 CDS Rpic_3344 NC_010682.1 3500886 3501779 D PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_4760 transcriptional regulator, XRE family; XRE family transcriptional regulator 3500886..3501779 Ralstonia pickettii 12J 6288536 YP_001900898.1 CDS Rpic_3345 NC_010682.1 3501870 3502646 D PFAM: PepSY-associated TM helix domain protein; KEGG: rso:RSc3067 probable transmembrane protein; PepSY-associated TM helix domain-containing protein 3501870..3502646 Ralstonia pickettii 12J 6286312 YP_001900899.1 CDS Rpic_3346 NC_010682.1 3502718 3503581 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pol:Bpro_0662 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(3502718..3503581) Ralstonia pickettii 12J 6286313 YP_001900900.1 CDS Rpic_3347 NC_010682.1 3503870 3504916 D PFAM: porin Gram-negative type; KEGG: reh:H16_A0083 outer membrane protein (porin); porin 3503870..3504916 Ralstonia pickettii 12J 6286314 YP_001900901.1 CDS Rpic_3348 NC_010682.1 3505197 3507470 R PFAM: MscS Mechanosensitive ion channel; KEGG: rso:RSc3068 probable transmembrane protein; mechanosensitive ion channel MscS complement(3505197..3507470) Ralstonia pickettii 12J 6286315 YP_001900902.1 CDS Rpic_3349 NC_010682.1 3507537 3508826 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc3069 putative transporter transmembrane protein; major facilitator superfamily protein complement(3507537..3508826) Ralstonia pickettii 12J 6286661 YP_001900903.1 CDS Rpic_3350 NC_010682.1 3508946 3509662 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc3070 probable glutathione S-transferase protein; glutathione S-transferase domain-containing protein 3508946..3509662 Ralstonia pickettii 12J 6286662 YP_001900904.1 CDS Rpic_3351 NC_010682.1 3509706 3510095 R KEGG: rso:RSc3071 hypothetical protein; hypothetical protein complement(3509706..3510095) Ralstonia pickettii 12J 6286663 YP_001900905.1 CDS Rpic_3352 NC_010682.1 3510137 3510559 R KEGG: rso:RSc3072 hypothetical protein; hypothetical protein complement(3510137..3510559) Ralstonia pickettii 12J 6286664 YP_001900906.1 CDS Rpic_3353 NC_010682.1 3510896 3511123 R KEGG: rso:RSc3073 hypothetical protein; hypothetical protein complement(3510896..3511123) Ralstonia pickettii 12J 6287684 YP_001900907.1 CDS Rpic_3354 NC_010682.1 3511167 3511376 R KEGG: rso:RSc3074 hypothetical protein; hypothetical protein complement(3511167..3511376) Ralstonia pickettii 12J 6287685 YP_001900908.1 CDS Rpic_3355 NC_010682.1 3511654 3512868 D KEGG: bam:Bamb_3510 hypothetical protein; hypothetical protein 3511654..3512868 Ralstonia pickettii 12J 6287686 YP_001900909.1 CDS Rpic_3356 NC_010682.1 3512884 3514032 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rso:RSc3077 hypothetical protein; cation diffusion facilitator family transporter complement(3512884..3514032) Ralstonia pickettii 12J 6287687 YP_001900910.1 CDS Rpic_3357 NC_010682.1 3514275 3514943 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rso:RSc3078 probable response regulator transcription regulator protein; two component LuxR family transcriptional regulator 3514275..3514943 Ralstonia pickettii 12J 6286853 YP_001900911.1 CDS Rpic_3358 NC_010682.1 3514948 3519258 D KEGG: rso:RSc3079 probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3; multi-sensor hybrid histidine kinase 3514948..3519258 Ralstonia pickettii 12J 6286854 YP_001900912.1 CDS Rpic_3359 NC_010682.1 3519380 3521026 D KEGG: reh:H16_A3740 cyclohexanone monooxygenase; cyclohexanone monooxygenase 3519380..3521026 Ralstonia pickettii 12J 6286855 YP_001900913.1 CDS Rpic_3360 NC_010682.1 3521055 3521945 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_A3741 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3521055..3521945 Ralstonia pickettii 12J 6286856 YP_001900914.1 CDS Rpic_3361 NC_010682.1 3521955 3522977 D PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_3600 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3521955..3522977 Ralstonia pickettii 12J 6288715 YP_001900915.1 CDS Rpic_3362 NC_010682.1 3522974 3523870 D KEGG: rme:Rmet_3601 FF domain protein; FF domain-containing protein 3522974..3523870 Ralstonia pickettii 12J 6288716 YP_001900916.1 CDS Rpic_3363 NC_010682.1 3523962 3524780 R PFAM: regulatory protein MerR; KEGG: rso:RSc3080 probable transcription regulator protein; MerR family transcriptional regulator complement(3523962..3524780) Ralstonia pickettii 12J 6288717 YP_001900917.1 CDS Rpic_3364 NC_010682.1 3524867 3526024 D KEGG: rso:RSc3082 hypothetical protein; hypothetical protein 3524867..3526024 Ralstonia pickettii 12J 6288718 YP_001900918.1 CDS Rpic_3365 NC_010682.1 3526021 3527094 D PFAM: protein of unknown function DUF811; KEGG: bxe:Bxe_A1322 putative exported lipoprotein; hypothetical protein 3526021..3527094 Ralstonia pickettii 12J 6286629 YP_001900919.1 CDS Rpic_3366 NC_010682.1 3527113 3527526 R KEGG: rso:RSc3083 hypothetical signal peptide protein; hypothetical protein complement(3527113..3527526) Ralstonia pickettii 12J 6286630 YP_001900920.1 CDS Rpic_3367 NC_010682.1 3527704 3528597 R PFAM: cytochrome c class I; KEGG: rso:RSc3084 probable transmembrane protein; cytochrome c class I complement(3527704..3528597) Ralstonia pickettii 12J 6286631 YP_001900921.1 CDS Rpic_3368 NC_010682.1 3529227 3530294 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3529227..3530294 Ralstonia pickettii 12J 6286382 YP_001900922.1 CDS Rpic_3369 NC_010682.1 3530630 3530941 D PFAM: High potential iron-sulfur protein; KEGG: rso:RSc3086 probable high potential iron-sulfur (HIPIP) signal peptide protein; High potential iron-sulfur protein 3530630..3530941 Ralstonia pickettii 12J 6286383 YP_001900923.1 CDS Rpic_3370 NC_010682.1 3531011 3531715 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc3087 probable response regulator transcription regulator protein; winged helix family two component transcriptional regulator 3531011..3531715 Ralstonia pickettii 12J 6286384 YP_001900924.1 CDS Rpic_3371 NC_010682.1 3531722 3532720 R PFAM: conserved hypothetical protein; KEGG: rso:RSc3088 putative signal peptide protein; hypothetical protein complement(3531722..3532720) Ralstonia pickettii 12J 6287832 YP_001900925.1 CDS Rpic_3372 NC_010682.1 3532866 3533996 R PFAM: porin Gram-negative type; KEGG: rso:RSc3091 probable outer membrane porin signal peptide protein; porin complement(3532866..3533996) Ralstonia pickettii 12J 6287833 YP_001900926.1 CDS Rpic_3373 NC_010682.1 3534495 3534779 D KEGG: rso:RSc3092 putative signal peptide protein; putative signal peptide protein 3534495..3534779 Ralstonia pickettii 12J 6287834 YP_001900927.1 CDS Rpic_3374 NC_010682.1 3534926 3537124 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B2226 xanthine dehydrogenase; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase complement(3534926..3537124) Ralstonia pickettii 12J 6287835 YP_001900928.1 CDS Rpic_3375 NC_010682.1 3537121 3538125 R PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: reu:Reut_B4506 molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein, C-terminal; molybdopterin dehydrogenase complement(3537121..3538125) Ralstonia pickettii 12J 6287928 YP_001900929.1 CDS Rpic_3376 NC_010682.1 3538134 3538874 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: reu:Reut_B4505 twin-arginine translocation pathway signal; (2Fe-2S)-binding domain-containing protein complement(3538134..3538874) Ralstonia pickettii 12J 6287929 YP_001900930.1 CDS Rpic_3377 NC_010682.1 3539037 3540347 R catalyzes the release of C-terminal glutamate residues from N-acylating moieties; glutamate carboxypeptidase complement(3539037..3540347) Ralstonia pickettii 12J 6287930 YP_001900931.1 CDS Rpic_3378 NC_010682.1 3540531 3541325 D PFAM: Domain of unknown function DUF1835; KEGG: rso:RSc3094 hypothetical protein; hypothetical protein 3540531..3541325 Ralstonia pickettii 12J 6287931 YP_001900932.1 CDS Rpic_3379 NC_010682.1 3541430 3543370 R transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC complement(3541430..3543370) Ralstonia pickettii 12J 6289073 YP_001900933.1 CDS Rpic_3380 NC_010682.1 3543394 3543957 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: rso:RSc3097 putative NAD(P)H oxidoreductase (NAD(P)H dehydrogenase (quinone)) oxidoreductase protein; NAD(P)H dehydrogenase (quinone) complement(3543394..3543957) Ralstonia pickettii 12J 6289074 YP_001900934.1 CDS Rpic_3381 NC_010682.1 3544356 3545051 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc3098 hypothetical protein; N-acetyltransferase GCN5 3544356..3545051 Ralstonia pickettii 12J 6289075 YP_001900935.1 CDS Rpic_3382 NC_010682.1 3545260 3545751 D KEGG: rso:RSc3099 hypothetical signal peptide protein; hypothetical protein 3545260..3545751 Ralstonia pickettii 12J 6289076 YP_001900936.1 CDS Rpic_3383 NC_010682.1 3545876 3546010 D hypothetical protein 3545876..3546010 Ralstonia pickettii 12J 6286938 YP_001900937.1 CDS Rpic_3384 NC_010682.1 3546114 3546413 D hypothetical protein 3546114..3546413 Ralstonia pickettii 12J 6286939 YP_001900938.1 CDS Rpic_3385 NC_010682.1 3546435 3546872 D KEGG: bur:Bcep18194_A5513 hypothetical protein; hypothetical protein 3546435..3546872 Ralstonia pickettii 12J 6286940 YP_001900939.1 CDS Rpic_3386 NC_010682.1 3546938 3547051 R hypothetical protein complement(3546938..3547051) Ralstonia pickettii 12J 6286941 YP_001900940.1 CDS Rpic_3387 NC_010682.1 3547301 3547789 R PFAM: regulatory protein AsnC/Lrp family; KEGG: rso:RSc3102 probable transcription regulator protein; AsnC family transcriptional regulator complement(3547301..3547789) Ralstonia pickettii 12J 6288943 YP_001900941.1 CDS Rpic_3388 NC_010682.1 3547945 3549051 D KEGG: rso:RSc3103 probable 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 3547945..3549051 Ralstonia pickettii 12J 6288944 YP_001900942.1 CDS Rpic_3389 NC_010682.1 3549270 3549887 R PFAM: Calcium-binding EF-hand-containing protein; KEGG: rso:RSc3104 putative calcium binding signal peptide protein; putative signal transduction protein with EFhand domain complement(3549270..3549887) Ralstonia pickettii 12J 6288945 YP_001900943.1 CDS Rpic_3390 NC_010682.1 3550035 3550718 R KEGG: rso:RSc3105 putative general secretion pathway related transmembrane protein; putative general secretion pathway transmembrane protein complement(3550035..3550718) Ralstonia pickettii 12J 6288946 YP_001900944.1 CDS Rpic_3391 NC_010682.1 3550893 3551363 D TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rso:RSc3106 putative general secretion pathway G transmembrane protein; general secretion pathway protein G 3550893..3551363 Ralstonia pickettii 12J 6287543 YP_001900945.1 CDS Rpic_3392 NC_010682.1 3551396 3551890 D TIGRFAM: general secretion pathway protein H; KEGG: rso:RSc3107 probable general secretory pathway H transmembrane protein; general secretion pathway protein H 3551396..3551890 Ralstonia pickettii 12J 6287544 YP_001900946.1 CDS Rpic_3393 NC_010682.1 3551887 3552285 D TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: rso:RSc3108 probable general secretory pathway I transmembrane protein; general secretion pathway protein I 3551887..3552285 Ralstonia pickettii 12J 6287545 YP_001900947.1 CDS Rpic_3394 NC_010682.1 3552275 3553018 D KEGG: rso:RSc3109 probable general secretory pathway J transmembrane protein; putative general secretory pathway J transmembrane protein 3552275..3553018 Ralstonia pickettii 12J 6287546 YP_001900948.1 CDS Rpic_3395 NC_010682.1 3553020 3554108 D PFAM: General secretion pathway protein K; KEGG: rso:RSc3110 probable general secretory pathway K transmembrane protein; General secretion pathway protein K 3553020..3554108 Ralstonia pickettii 12J 6289527 YP_001900949.1 CDS Rpic_3396 NC_010682.1 3554270 3555700 D PFAM: General secretion pathway L; KEGG: rso:RSc3111 probable general secretory pathway L transmembrane protein; general secretion pathway protein L 3554270..3555700 Ralstonia pickettii 12J 6289528 YP_001900950.1 CDS Rpic_3397 NC_010682.1 3555711 3556280 D PFAM: General secretion pathway M protein; KEGG: rso:RSc3112 probable general secretory pathway M transmembrane protein; general secretion pathway protein M 3555711..3556280 Ralstonia pickettii 12J 6289529 YP_001900951.1 CDS Rpic_3398 NC_010682.1 3556298 3557140 D KEGG: rso:RSc3113 probable general secretory pathway N transmembrane protein; putative general secretory pathway N transmembrane protein 3556298..3557140 Ralstonia pickettii 12J 6289530 YP_001900952.1 CDS Rpic_3399 NC_010682.1 3557178 3559601 D TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rso:RSc3114 probable general secretory pathway D transmembrane protein; general secretion pathway protein D 3557178..3559601 Ralstonia pickettii 12J 6286490 YP_001900953.1 CDS Rpic_3400 NC_010682.1 3559618 3561174 D KEGG: rso:RSc3115 probable general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E 3559618..3561174 Ralstonia pickettii 12J 6286491 YP_001900954.1 CDS Rpic_3401 NC_010682.1 3561197 3562408 D TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: rso:RSc3116 probable general secretory pathway F transmembrane protein; general secretion pathway protein F 3561197..3562408 Ralstonia pickettii 12J 6286492 YP_001900955.1 CDS Rpic_3402 NC_010682.1 3563007 3563690 R KEGG: bte:BTH_II1692 hypothetical protein; hypothetical protein complement(3563007..3563690) Ralstonia pickettii 12J 6286493 YP_001900956.1 CDS Rpic_3403 NC_010682.1 3563783 3565252 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rso:RSc3119 probable transcription regulator protein; GntR family transcriptional regulator 3563783..3565252 Ralstonia pickettii 12J 6289644 YP_001900957.1 CDS Rpic_3404 NC_010682.1 3565534 3569094 D Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3565534..3569094 Ralstonia pickettii 12J 6289645 YP_001900958.1 CDS sbcB NC_010682.1 3569172 3570611 R Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I complement(3569172..3570611) Ralstonia pickettii 12J 6289646 YP_001900959.1 CDS Rpic_3406 NC_010682.1 3570754 3571749 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rso:RSc3131 D-lactate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3570754..3571749 Ralstonia pickettii 12J 6289647 YP_001900960.1 CDS Rpic_3407 NC_010682.1 3571759 3572388 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: reh:H16_A3548 predicted HD phosphohydrolase; metal dependent phosphohydrolase complement(3571759..3572388) Ralstonia pickettii 12J 6287987 YP_001900961.1 CDS Rpic_3408 NC_010682.1 3572517 3573248 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: reu:Reut_A0894 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3572517..3573248 Ralstonia pickettii 12J 6287988 YP_001900962.1 CDS Rpic_3409 NC_010682.1 3573479 3574291 D KEGG: rso:RSc3135 hypothetical protein; hypothetical protein 3573479..3574291 Ralstonia pickettii 12J 6287989 YP_001900963.1 CDS Rpic_3410 NC_010682.1 3574372 3575532 R PFAM: porin Gram-negative type; KEGG: rso:RSc2933 putative porin signal peptide protein; porin complement(3574372..3575532) Ralstonia pickettii 12J 6287990 YP_001900964.1 CDS Rpic_3411 NC_010682.1 3575928 3576512 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_B2906 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(3575928..3576512) Ralstonia pickettii 12J 6286749 YP_001900965.1 CDS Rpic_3412 NC_010682.1 3576654 3578642 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rso:RSc3136 putative methyl-accepting chemotaxis transmembrane protein; methyl-accepting chemotaxis sensory transducer complement(3576654..3578642) Ralstonia pickettii 12J 6286750 YP_001900966.1 CDS Rpic_3413 NC_010682.1 3578763 3581540 R KEGG: rso:RSc3137 hypothetical protein; hypothetical protein complement(3578763..3581540) Ralstonia pickettii 12J 6286751 YP_001900967.1 CDS Rpic_3414 NC_010682.1 3581661 3581888 R hypothetical protein complement(3581661..3581888) Ralstonia pickettii 12J 6286752 YP_001900968.1 CDS Rpic_3415 NC_010682.1 3582086 3582874 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc3138 probable oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(3582086..3582874) Ralstonia pickettii 12J 6288872 YP_001900969.1 CDS Rpic_3416 NC_010682.1 3583157 3583645 D PFAM: regulatory protein MarR; KEGG: rso:RSc3139 putative transcription regulator protein; MarR family transcriptional regulator 3583157..3583645 Ralstonia pickettii 12J 6288873 YP_001900970.1 CDS Rpic_3417 NC_010682.1 3583728 3584426 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bam:Bamb_2835 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(3583728..3584426) Ralstonia pickettii 12J 6288874 YP_001900971.1 CDS Rpic_3418 NC_010682.1 3584529 3585449 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rso:RSc3140 putative serine protease protein; peptidase S1 and S6 chymotrypsin/Hap complement(3584529..3585449) Ralstonia pickettii 12J 6288875 YP_001900972.1 CDS Rpic_3419 NC_010682.1 3585469 3586074 R KEGG: rso:RSc3141 putative lipoprotein transmembrane; putative transmembrane lipoprotein complement(3585469..3586074) Ralstonia pickettii 12J 6289731 YP_001900973.1 CDS Rpic_3420 NC_010682.1 3586197 3586805 R PFAM: regulatory protein TetR; KEGG: bbr:BB2329 putative TetR-family transcriptional regulator; TetR family transcriptional regulator complement(3586197..3586805) Ralstonia pickettii 12J 6289732 YP_001900974.1 CDS Rpic_3421 NC_010682.1 3586910 3588376 D PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB2330 probable membrane efflux protein; major facilitator superfamily protein 3586910..3588376 Ralstonia pickettii 12J 6289733 YP_001900975.1 CDS Rpic_3422 NC_010682.1 3588383 3588982 R PFAM: phosphoesterase PA-phosphatase related; KEGG: rso:RSc3142 putative transport transmembrane protein; PA-phosphatase-like phosphoesterase complement(3588383..3588982) Ralstonia pickettii 12J 6289734 YP_001900976.1 CDS Rpic_3423 NC_010682.1 3589235 3589441 D KEGG: bch:Bcen2424_3160 diguanylate cyclase; diguanylate cyclase 3589235..3589441 Ralstonia pickettii 12J 6286785 YP_001900977.1 CDS Rpic_3424 NC_010682.1 3589919 3591055 D KEGG: bvi:Bcep1808_1534 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 3589919..3591055 Ralstonia pickettii 12J 6286786 YP_001900978.1 CDS Rpic_3425 NC_010682.1 3591455 3592825 R PFAM: amino acid permease-associated region; KEGG: reu:Reut_B4004 amino acid permease-associated region; amino acid permease-associated protein complement(3591455..3592825) Ralstonia pickettii 12J 6286787 YP_001900979.1 CDS Rpic_3426 NC_010682.1 3593100 3593408 R KEGG: bam:Bamb_6391 hypothetical protein; hypothetical protein complement(3593100..3593408) Ralstonia pickettii 12J 6286788 YP_001900980.1 CDS groEL NC_010682.1 3593518 3595140 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(3593518..3595140) Ralstonia pickettii 12J 6287975 YP_001900981.1 CDS Rpic_3428 NC_010682.1 3595238 3595555 R PFAM: chaperonin Cpn10; KEGG: bmu:Bmul_5254 chaperonin Cpn10; chaperonin Cpn10 complement(3595238..3595555) Ralstonia pickettii 12J 6287976 YP_001900982.1 CDS Rpic_3429 NC_010682.1 3595730 3596374 R KEGG: bam:Bamb_6394 hypothetical protein; hypothetical protein complement(3595730..3596374) Ralstonia pickettii 12J 6287977 YP_001900983.1 CDS Rpic_3430 NC_010682.1 3596564 3597007 D PFAM: heat shock protein Hsp20; KEGG: bmn:BMA10247_2615 heat shock protein, HSP20 family; heat shock protein Hsp20 3596564..3597007 Ralstonia pickettii 12J 6287978 YP_001900984.1 CDS Rpic_3431 NC_010682.1 3597041 3597460 D PFAM: heat shock protein Hsp20; KEGG: bpd:BURPS668_3388 heat shock protein, HSP20 family; heat shock protein Hsp20 3597041..3597460 Ralstonia pickettii 12J 6288079 YP_001900985.1 CDS Rpic_3432 NC_010682.1 3597567 3597812 D KEGG: bpl:BURPS1106A_3421 hypothetical protein; hypothetical protein 3597567..3597812 Ralstonia pickettii 12J 6288080 YP_001900986.1 CDS Rpic_3433 NC_010682.1 3597940 3599256 R KEGG: bte:BTH_I0935 hypothetical protein; hypothetical protein complement(3597940..3599256) Ralstonia pickettii 12J 6288081 YP_001900987.1 CDS Rpic_3434 NC_010682.1 3599394 3600200 R KEGG: bte:BTH_I0934 hypothetical protein; hypothetical protein complement(3599394..3600200) Ralstonia pickettii 12J 6288082 YP_001900988.1 CDS Rpic_3435 NC_010682.1 3600200 3600916 R PFAM: peptidase C39 bacteriocin processing; KEGG: bxe:Bxe_A1024 putative peptidase; peptidase C39 bacteriocin processing complement(3600200..3600916) Ralstonia pickettii 12J 6288900 YP_001900989.1 CDS Rpic_3436 NC_010682.1 3600983 3601762 R KEGG: bxe:Bxe_A1025 hypothetical protein; hypothetical protein complement(3600983..3601762) Ralstonia pickettii 12J 6288901 YP_001900990.1 CDS Rpic_3437 NC_010682.1 3601789 3602397 R KEGG: bxe:Bxe_A1026 conserved hypothetical signal peptide protein; hypothetical protein complement(3601789..3602397) Ralstonia pickettii 12J 6288902 YP_001900991.1 CDS Rpic_3438 NC_010682.1 3602394 3602903 R KEGG: bte:BTH_I0930 hypothetical protein; hypothetical protein complement(3602394..3602903) Ralstonia pickettii 12J 6288903 YP_001900992.1 CDS Rpic_3439 NC_010682.1 3603329 3604309 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bba:Bd0664 similar to lipase LipA; alpha/beta hydrolase 3603329..3604309 Ralstonia pickettii 12J 6289683 YP_001900993.1 CDS Rpic_3441 NC_010682.1 3604593 3604919 R PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: reu:Reut_B5694 ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD complement(3604593..3604919) Ralstonia pickettii 12J 6289685 YP_001900994.1 CDS Rpic_3442 NC_010682.1 3604940 3605374 R hypothetical protein complement(3604940..3605374) Ralstonia pickettii 12J 6289686 YP_001900995.1 CDS Rpic_3443 NC_010682.1 3605408 3605839 R hypothetical protein complement(3605408..3605839) Ralstonia pickettii 12J 6286231 YP_001900996.1 CDS Rpic_3444 NC_010682.1 3606022 3606483 D PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; Penicillinase repressor; KEGG: rso:RS02614 putative transcription regulator protein; MarR family transcriptional regulator 3606022..3606483 Ralstonia pickettii 12J 6286232 YP_001900997.1 CDS Rpic_3445 NC_010682.1 3606622 3607047 D PFAM: OsmC family protein; KEGG: rso:RSp1107 probable organic hydroperoxide resistance protein; OsmC family protein 3606622..3607047 Ralstonia pickettii 12J 6286233 YP_001900998.1 CDS Rpic_3446 NC_010682.1 3607089 3608108 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rso:RS02616 probable lipase signal peptide protein; alpha/beta hydrolase 3607089..3608108 Ralstonia pickettii 12J 6286234 YP_001900999.1 CDS Rpic_3447 NC_010682.1 3608409 3609662 D KEGG: rso:RSc0639 probable heat shock protein; putative heat shock protein 3608409..3609662 Ralstonia pickettii 12J 6289057 YP_001901000.1 CDS Rpic_3448 NC_010682.1 3609907 3610329 R hypothetical protein complement(3609907..3610329) Ralstonia pickettii 12J 6289058 YP_001901001.1 CDS Rpic_3449 NC_010682.1 3610512 3610880 R KEGG: rso:RSc3434 hypothetical protein; hypothetical protein complement(3610512..3610880) Ralstonia pickettii 12J 6289059 YP_001901002.1 CDS Rpic_3450 NC_010682.1 3611589 3612263 D KEGG: cte:CT1878 type I restriction system endonuclease; type I restriction system endonuclease 3611589..3612263 Ralstonia pickettii 12J 6289060 YP_001901003.1 CDS Rpic_3451 NC_010682.1 3612485 3614206 R PFAM: 5'-Nucleotidase domain protein; KEGG: rso:RSc3253 probable sulfur oxidation signal peptide protein; 5'-nucleotidase complement(3612485..3614206) Ralstonia pickettii 12J 6286847 YP_001901004.1 CDS Rpic_3452 NC_010682.1 3614203 3614700 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc3254 hypothetical protein; alkyl hydroperoxide reductase complement(3614203..3614700) Ralstonia pickettii 12J 6286848 YP_001901005.1 CDS Rpic_3453 NC_010682.1 3614705 3615367 R KEGG: rso:RSc3255 hypothetical protein; hypothetical protein complement(3614705..3615367) Ralstonia pickettii 12J 6288896 YP_001901006.1 CDS Rpic_3454 NC_010682.1 3615384 3616205 R KEGG: rso:RSc3256 hypothetical protein; hypothetical protein complement(3615384..3616205) Ralstonia pickettii 12J 6288897 YP_001901007.1 CDS Rpic_3455 NC_010682.1 3616225 3616680 R PFAM: Domain of unknown function DUF1791; KEGG: rso:RSc3257 hypothetical signal peptide protein; hypothetical protein complement(3616225..3616680) Ralstonia pickettii 12J 6288898 YP_001901008.1 CDS Rpic_3456 NC_010682.1 3616697 3617008 R PFAM: Sulphur oxidation protein SoxZ; KEGG: rso:RSc3258 hypothetical protein; sulfur oxidation protein SoxZ complement(3616697..3617008) Ralstonia pickettii 12J 6288899 YP_001901009.1 CDS Rpic_3457 NC_010682.1 3617027 3617497 R KEGG: rso:RSc3259 hypothetical protein; hypothetical protein complement(3617027..3617497) Ralstonia pickettii 12J 6287021 YP_001901010.1 CDS Rpic_3458 NC_010682.1 3617508 3617855 R PFAM: cytochrome c class I; KEGG: rso:RSc3260 probable cytochrome c transmembrane protein; cytochrome c class I complement(3617508..3617855) Ralstonia pickettii 12J 6287022 YP_001901011.1 CDS Rpic_3459 NC_010682.1 3618029 3618916 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc3261 hypothetical protein; hypothetical protein complement(3618029..3618916) Ralstonia pickettii 12J 6287023 YP_001901012.1 CDS Rpic_3460 NC_010682.1 3619042 3620334 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; KEGG: rso:RSc3262 probable sulfide dehydrogenase flavocytochrome c oxidoreductase protein; flavocytochrome c sulfide dehydrogenase complement(3619042..3620334) Ralstonia pickettii 12J 6287024 YP_001901013.1 CDS Rpic_3461 NC_010682.1 3620331 3620687 R KEGG: rso:RSc3263 hypothetical signal peptide protein; hypothetical protein complement(3620331..3620687) Ralstonia pickettii 12J 6287704 YP_001901014.1 CDS Rpic_3462 NC_010682.1 3620822 3621640 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: rso:RSc3264 hypothetical signal peptide protein; transport-associated complement(3620822..3621640) Ralstonia pickettii 12J 6287705 YP_001901015.1 CDS Rpic_3463 NC_010682.1 3621681 3622058 R PFAM: protein of unknown function UPF0102; KEGG: rso:RSc3265 hypothetical protein; hypothetical protein complement(3621681..3622058) Ralstonia pickettii 12J 6287706 YP_001901016.1 CDS Rpic_3464 NC_010682.1 3622094 3622996 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rso:RSc3266 hypothetical protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 3622094..3622996 Ralstonia pickettii 12J 6287707 YP_001901017.1 CDS Rpic_3465 NC_010682.1 3623023 3623775 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: rso:RSc3267 putative lipoprotein; rare lipoprotein A complement(3623023..3623775) Ralstonia pickettii 12J 6286554 YP_001901018.1 CDS Rpic_3466 NC_010682.1 3623956 3624612 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc3268 hypothetical protein; beta-lactamase domain-containing protein 3623956..3624612 Ralstonia pickettii 12J 6286555 YP_001901019.1 CDS Rpic_3467 NC_010682.1 3624609 3625340 D KEGG: rso:RSc3269 hypothetical protein; hypothetical protein 3624609..3625340 Ralstonia pickettii 12J 6286556 YP_001901020.1 CDS Rpic_3468 NC_010682.1 3625462 3625881 D KEGG: rso:RSc3270 hypothetical protein; hypothetical protein 3625462..3625881 Ralstonia pickettii 12J 6286557 YP_001901021.1 CDS Rpic_3469 NC_010682.1 3626007 3626357 R PFAM: arsenate reductase and related; KEGG: rso:RSc3271 putative arsenate reductase oxidoreductase protein; arsenate reductase-like protein complement(3626007..3626357) Ralstonia pickettii 12J 6288250 YP_001901022.1 CDS Rpic_3470 NC_010682.1 3626593 3627867 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rso:RSc3273 hypothetical protein; peptidase M20 complement(3626593..3627867) Ralstonia pickettii 12J 6288251 YP_001901023.1 CDS Rpic_3471 NC_010682.1 3627960 3628487 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(3627960..3628487) Ralstonia pickettii 12J 6288252 YP_001901024.1 CDS Rpic_3472 NC_010682.1 3628484 3629494 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(3628484..3629494) Ralstonia pickettii 12J 6288253 YP_001901025.1 CDS Rpic_3473 NC_010682.1 3629838 3631178 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 3629838..3631178 Ralstonia pickettii 12J 6287460 YP_001901026.1 CDS Rpic_3474 NC_010682.1 3631171 3631911 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rso:RSc3276 probable transcription regulator protein; GntR family transcriptional regulator 3631171..3631911 Ralstonia pickettii 12J 6287461 YP_001901027.1 CDS Rpic_3475 NC_010682.1 3631918 3632502 D PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: rso:RSc3277 hypothetical protein; hypothetical protein 3631918..3632502 Ralstonia pickettii 12J 6287462 YP_001901028.1 CDS Rpic_3476 NC_010682.1 3632506 3632964 R KEGG: nfa:nfa48160 hypothetical protein; hypothetical protein complement(3632506..3632964) Ralstonia pickettii 12J 6287463 YP_001901029.1 CDS Rpic_3477 NC_010682.1 3633044 3633955 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc3280 probable transcription regulator protein; LysR family transcriptional regulator complement(3633044..3633955) Ralstonia pickettii 12J 6286259 YP_001901030.1 CDS Rpic_3478 NC_010682.1 3634301 3636076 D catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 3634301..3636076 Ralstonia pickettii 12J 6286260 YP_001901031.1 CDS Rpic_3479 NC_010682.1 3636120 3636902 D KEGG: rso:RSc3282 probable hydroxypyruvate isomerase protein; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; hydroxypyruvate isomerase 3636120..3636902 Ralstonia pickettii 12J 6286261 YP_001901032.1 CDS Rpic_3480 NC_010682.1 3637540 3638454 D KEGG: rso:RSc3283 probable transmembrane 2-hydroxy-3-oxopropionate reductase oxidoreductase protein; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 3637540..3638454 Ralstonia pickettii 12J 6286262 YP_001901033.1 CDS Rpic_3481 NC_010682.1 3638532 3639851 D PFAM: MOFRL domain protein; KEGG: reh:H16_A3601 hydroxypyruvate reductase; hydroxypyruvate reductase 3638532..3639851 Ralstonia pickettii 12J 6289363 YP_001901034.1 CDS Rpic_3482 NC_010682.1 3640478 3641956 D KEGG: reh:H16_A3602 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 3640478..3641956 Ralstonia pickettii 12J 6289364 YP_001901035.1 CDS Rpic_3483 NC_010682.1 3641981 3643465 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3641981..3643465) Ralstonia pickettii 12J 6289365 YP_001901036.1 CDS Rpic_3484 NC_010682.1 3643720 3644808 D KEGG: rso:RSc3285 putative Leu/Ile/Val-binding signal peptide protein; putative Leu/Ile/Val-binding signal peptide protein 3643720..3644808 Ralstonia pickettii 12J 6289366 YP_001901037.1 CDS Rpic_3485 NC_010682.1 3645350 3647470 R PFAM: UvrD/REP helicase; KEGG: rso:RSc3289 probable ATP-dependent DNA helicase REP protein; UvrD/REP helicase complement(3645350..3647470) Ralstonia pickettii 12J 6286301 YP_001901038.1 CDS Rpic_3486 NC_010682.1 3647744 3648070 D KEGG: rso:RSc3291 hypothetical protein; hypothetical protein 3647744..3648070 Ralstonia pickettii 12J 6286302 YP_001901039.1 CDS gcvT NC_010682.1 3648598 3649725 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3648598..3649725 Ralstonia pickettii 12J 6286303 YP_001901040.1 CDS Rpic_3488 NC_010682.1 3649773 3650153 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3649773..3650153 Ralstonia pickettii 12J 6286753 YP_001901041.1 CDS Rpic_3489 NC_010682.1 3650238 3653177 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3650238..3653177 Ralstonia pickettii 12J 6286754 YP_001901042.1 CDS Rpic_3490 NC_010682.1 3653326 3654702 D KEGG: rso:RSc3296 probable L-serine dehydratase (L-serine deaminase ) protein; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 3653326..3654702 Ralstonia pickettii 12J 6286755 YP_001901043.1 CDS Rpic_3491 NC_010682.1 3654875 3656929 D TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: rso:RSc3297 hypothetical protein; oligopeptide transporter 3654875..3656929 Ralstonia pickettii 12J 6286756 YP_001901044.1 CDS Rpic_3492 NC_010682.1 3656944 3657459 D PFAM: GCN5-related N-acetyltransferase; KEGG: ppu:PP_4846 phosphinothricin N-acetyltransferase, putative; N-acetyltransferase GCN5 3656944..3657459 Ralstonia pickettii 12J 6286133 YP_001901045.1 CDS Rpic_3493 NC_010682.1 3657475 3658608 R ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase complement(3657475..3658608) Ralstonia pickettii 12J 6286134 YP_001901046.1 CDS Rpic_3494 NC_010682.1 3658614 3659837 R PFAM: sodium/hydrogen exchanger; KEGG: rso:RSc3299 hypothetical protein; sodium/hydrogen exchanger complement(3658614..3659837) Ralstonia pickettii 12J 6286135 YP_001901047.1 CDS Rpic_3495 NC_010682.1 3660036 3661181 R PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc3300 putative amino-acid transport signal peptide protein; extracellular ligand-binding receptor complement(3660036..3661181) Ralstonia pickettii 12J 6286136 YP_001901048.1 CDS putA NC_010682.1 3661312 3665283 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(3661312..3665283) Ralstonia pickettii 12J 6288651 YP_001901049.1 CDS Rpic_3497 NC_010682.1 3665534 3667831 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(3665534..3667831) Ralstonia pickettii 12J 6288652 YP_001901050.1 CDS hemE NC_010682.1 3668413 3669516 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(3668413..3669516) Ralstonia pickettii 12J 6288653 YP_001901051.1 CDS Rpic_3499 NC_010682.1 3669611 3670096 R PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: rso:RSc3304 probable signal peptide protein; cupin complement(3669611..3670096) Ralstonia pickettii 12J 6288654 YP_001901052.1 CDS Rpic_3500 NC_010682.1 3670311 3670658 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pol:Bpro_2417 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 3670311..3670658 Ralstonia pickettii 12J 6288461 YP_001901053.1 CDS Rpic_3501 NC_010682.1 3670666 3672468 R PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: rso:RSc3307 putative methyl-accepting chemotaxis transmembrane protein; Cache sensor-containing methyl-accepting chemotaxis sensory transducer complement(3670666..3672468) Ralstonia pickettii 12J 6288462 YP_001901054.1 CDS Rpic_3502 NC_010682.1 3672854 3673783 D PFAM: fatty acid hydroxylase; KEGG: reu:Reut_A0387 hypothetical protein; fatty acid hydroxylase 3672854..3673783 Ralstonia pickettii 12J 6288463 YP_001901055.1 CDS Rpic_3503 NC_010682.1 3673785 3674666 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc3308 probable transcription regulator protein; LysR family transcriptional regulator complement(3673785..3674666) Ralstonia pickettii 12J 6288464 YP_001901056.1 CDS Rpic_3504 NC_010682.1 3674767 3675396 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc3309 probable glutathione S-transferase protein; glutathione S-transferase domain-containing protein 3674767..3675396 Ralstonia pickettii 12J 6287049 YP_001901057.1 CDS Rpic_3505 NC_010682.1 3675590 3676651 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc3310 probable phosphate-binding periplasmic precursor (PBP) ABC transporter protein; phosphate ABC transporter substrate-binding protein 3675590..3676651 Ralstonia pickettii 12J 6287050 YP_001901058.1 CDS Rpic_3506 NC_010682.1 3676824 3677027 D KEGG: rso:RSc3311 hypothetical protein; hypothetical protein 3676824..3677027 Ralstonia pickettii 12J 6287051 YP_001901059.1 CDS Rpic_3507 NC_010682.1 3677042 3677989 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rso:RSc3312 putative lipase protein; alpha/beta hydrolase complement(3677042..3677989) Ralstonia pickettii 12J 6287052 YP_001901060.1 CDS Rpic_3508 NC_010682.1 3678144 3678608 R PFAM: CoA-binding domain protein; KEGG: rso:RSc3313 hypothetical protein; CoA-binding domain-containing protein complement(3678144..3678608) Ralstonia pickettii 12J 6288242 YP_001901061.1 CDS Rpic_3509 NC_010682.1 3678629 3679771 R KEGG: rso:RSc3314 hypothetical protein; hypothetical protein complement(3678629..3679771) Ralstonia pickettii 12J 6288243 YP_001901062.1 CDS Rpic_3510 NC_010682.1 3680383 3682782 D KEGG: rso:RSc3315 putative proline-rich transmembrane protein; putative proline-rich transmembrane protein 3680383..3682782 Ralstonia pickettii 12J 6288244 YP_001901063.1 CDS atpC NC_010682.1 3682882 3683298 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(3682882..3683298) Ralstonia pickettii 12J 6288245 YP_001901064.1 CDS Rpic_3512 NC_010682.1 3683390 3684799 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(3683390..3684799) Ralstonia pickettii 12J 6288190 YP_001901065.1 CDS Rpic_3513 NC_010682.1 3684836 3685711 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(3684836..3685711) Ralstonia pickettii 12J 6288191 YP_001901066.1 CDS Rpic_3514 NC_010682.1 3685776 3687317 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(3685776..3687317) Ralstonia pickettii 12J 6288192 YP_001901067.1 CDS Rpic_3515 NC_010682.1 3687391 3687927 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(3687391..3687927) Ralstonia pickettii 12J 6288193 YP_001901068.1 CDS Rpic_3516 NC_010682.1 3687930 3688400 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(3687930..3688400) Ralstonia pickettii 12J 6288671 YP_001901069.1 CDS Rpic_3517 NC_010682.1 3688507 3688773 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(3688507..3688773) Ralstonia pickettii 12J 6288672 YP_001901070.1 CDS Rpic_3518 NC_010682.1 3688857 3689738 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(3688857..3689738) Ralstonia pickettii 12J 6288673 YP_001901071.1 CDS Rpic_3519 NC_010682.1 3689970 3690518 R KEGG: rso:RSc3324 hypothetical protein; hypothetical protein complement(3689970..3690518) Ralstonia pickettii 12J 6288674 YP_001901072.1 CDS Rpic_3520 NC_010682.1 3690868 3691779 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: rso:RSc3325 putative chromosome partitioning protein ParB; parB-like partition protein complement(3690868..3691779) Ralstonia pickettii 12J 6286793 YP_001901073.1 CDS Rpic_3521 NC_010682.1 3691797 3692582 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rso:RSc3326 putative chromosome partitioning protein ParA; Cobyrinic acid ac-diamide synthase complement(3691797..3692582) Ralstonia pickettii 12J 6286794 YP_001901074.1 CDS gidB NC_010682.1 3692620 3693288 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3692620..3693288) Ralstonia pickettii 12J 6286795 YP_001901075.1 CDS Rpic_3523 NC_010682.1 3693288 3695237 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3693288..3695237) Ralstonia pickettii 12J 6286796 YP_001901076.1 CDS Rpic_3525 NC_010682.1 3695999 3697147 R PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc3329 probable amino-acid-binding periplasmic (PBP) ABC transporter protein; extracellular ligand-binding receptor complement(3695999..3697147) Ralstonia pickettii 12J 6286523 YP_001901077.1 CDS Rpic_3526 NC_010682.1 3697393 3698094 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc3331 short chain dehydrogenase; short chain dehydrogenase complement(3697393..3698094) Ralstonia pickettii 12J 6286524 YP_001901078.1 CDS Rpic_3527 NC_010682.1 3698205 3698420 D KEGG: rso:RSc3333 hypothetical protein; hypothetical protein 3698205..3698420 Ralstonia pickettii 12J 6286525 YP_001901079.1 CDS Rpic_3528 NC_010682.1 3698433 3699329 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc3334 probable transcription regulator protein; LysR family transcriptional regulator complement(3698433..3699329) Ralstonia pickettii 12J 6289587 YP_001901080.1 CDS Rpic_3529 NC_010682.1 3699435 3700391 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: rso:RSc3335 hypothetical protein; NAD-dependent epimerase/dehydratase 3699435..3700391 Ralstonia pickettii 12J 6289588 YP_001901081.1 CDS Rpic_3530 NC_010682.1 3700377 3700928 R TIGRFAM: phosphonate degradation operons associated HDIG domain protein; SMART: metal-dependent phosphohydrolase HD region; KEGG: bte:BTH_II2048 hypothetical protein; metal dependent phosphohydrolase complement(3700377..3700928) Ralstonia pickettii 12J 6289589 YP_001901082.1 CDS Rpic_3531 NC_010682.1 3701097 3701474 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bps:BPSS1690 hypothetical protein; cupin 3701097..3701474 Ralstonia pickettii 12J 6289590 YP_001901083.1 CDS Rpic_3532 NC_010682.1 3701464 3702222 R PFAM: protein of unknown function DUF81; KEGG: rso:RSc3337 hypothetical protein; hypothetical protein complement(3701464..3702222) Ralstonia pickettii 12J 6288513 YP_001901084.1 CDS Rpic_3533 NC_010682.1 3702246 3702683 R KEGG: rso:RSc3338 hypothetical protein; hypothetical protein complement(3702246..3702683) Ralstonia pickettii 12J 6288514 YP_001901085.1 CDS Rpic_3534 NC_010682.1 3702803 3703054 D KEGG: rso:RSc3339 hypothetical protein; hypothetical protein 3702803..3703054 Ralstonia pickettii 12J 6288515 YP_001901086.1 CDS Rpic_3535 NC_010682.1 3703288 3704292 R PFAM: inner-membrane translocator; KEGG: rso:RSc3340 probable transmembrane ABC transporter protein; inner-membrane translocator complement(3703288..3704292) Ralstonia pickettii 12J 6288516 YP_001901087.1 CDS Rpic_3536 NC_010682.1 3704289 3705173 R PFAM: inner-membrane translocator; KEGG: rso:RSc3341 probable transmembrane ABC transporter protein; inner-membrane translocator complement(3704289..3705173) Ralstonia pickettii 12J 6286689 YP_001901088.1 CDS Rpic_3537 NC_010682.1 3705254 3706462 R KEGG: rso:RSc3342 putative substrate-binding periplasmic (PBP) ABC transporter protein; putative substrate-binding periplasmic (PBP) ABC transporter protein complement(3705254..3706462) Ralstonia pickettii 12J 6286690 YP_001901089.1 CDS Rpic_3538 NC_010682.1 3706538 3707278 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc3343 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(3706538..3707278) Ralstonia pickettii 12J 6286691 YP_001901090.1 CDS Rpic_3539 NC_010682.1 3707373 3708143 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc3344 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(3707373..3708143) Ralstonia pickettii 12J 6286692 YP_001901091.1 CDS Rpic_3540 NC_010682.1 3708389 3710023 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: rso:RSc3345 putative choline dehydrogenase lipoprotein oxidoreductase; glucose-methanol-choline oxidoreductase complement(3708389..3710023) Ralstonia pickettii 12J 6286424 YP_001901092.1 CDS Rpic_3541 NC_010682.1 3710092 3710961 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc3346 putative lysophospholipase protein; alpha/beta hydrolase fold protein complement(3710092..3710961) Ralstonia pickettii 12J 6286425 YP_001901093.1 CDS Rpic_3542 NC_010682.1 3711037 3711495 R TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rso:RSc3347 probable transcription regulator protein; MerR family transcriptional regulator complement(3711037..3711495) Ralstonia pickettii 12J 6286426 YP_001901094.1 CDS Rpic_3543 NC_010682.1 3711492 3713714 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rso:RSc3348 probable cation-transporting ATPase transmembrane protein; heavy metal translocating P-type ATPase complement(3711492..3713714) Ralstonia pickettii 12J 6286427 YP_001901095.1 CDS Rpic_3544 NC_010682.1 3713860 3714072 D PFAM: Heavy metal transport/detoxification protein; KEGG: rso:RSc3349 hypothetical protein; heavy metal transport/detoxification protein 3713860..3714072 Ralstonia pickettii 12J 6287284 YP_001901096.1 CDS Rpic_3545 NC_010682.1 3714138 3714857 R PFAM: OmpW family protein; KEGG: rso:RSc3350 putative outer membrane W signal peptide protein; OmpW family protein complement(3714138..3714857) Ralstonia pickettii 12J 6287285 YP_001901097.1 CDS Rpic_3546 NC_010682.1 3715061 3716062 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(3715061..3716062) Ralstonia pickettii 12J 6287286 YP_001901098.1 CDS Rpic_3547 NC_010682.1 3716098 3716862 R PFAM: YhhN family protein; KEGG: rso:RSc3353 hypothetical protein; hypothetical protein complement(3716098..3716862) Ralstonia pickettii 12J 6287287 YP_001901099.1 CDS Rpic_3548 NC_010682.1 3716955 3717431 R PFAM: regulatory protein AsnC/Lrp family; KEGG: rso:RSc3354 probable transcription regulator protein; AsnC family transcriptional regulator complement(3716955..3717431) Ralstonia pickettii 12J 6286765 YP_001901100.1 CDS phhA NC_010682.1 3717570 3718514 D phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 3717570..3718514 Ralstonia pickettii 12J 6286766 YP_001901101.1 CDS phhB NC_010682.1 3718575 3718880 D 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 3718575..3718880 Ralstonia pickettii 12J 6286767 YP_001901102.1 CDS Rpic_3551 NC_010682.1 3718899 3719165 R KEGG: rso:RSc3357 hypothetical protein; hypothetical protein complement(3718899..3719165) Ralstonia pickettii 12J 6286768 YP_001901103.1 CDS Rpic_3552 NC_010682.1 3719214 3719924 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: reu:Reut_A3389 response regulator receiver:transcriptional regulatory protein, C-terminal; winged helix family two component transcriptional regulator 3719214..3719924 Ralstonia pickettii 12J 6287343 YP_001901104.1 CDS Rpic_3553 NC_010682.1 3719934 3721607 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: reh:H16_A3681 signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3719934..3721607 Ralstonia pickettii 12J 6287344 YP_001901105.1 CDS Rpic_3554 NC_010682.1 3721624 3722163 R PFAM: nuclear protein SET; KEGG: rso:RSc3358 hypothetical protein; nuclear protein SET complement(3721624..3722163) Ralstonia pickettii 12J 6287345 YP_001901106.1 CDS Rpic_3555 NC_010682.1 3722798 3723076 D PFAM: histone family protein DNA-binding protein; KEGG: rso:RSc3359 probable histone-like DNA-binding protein HU-beta (NS1); histone family protein DNA-binding protein 3722798..3723076 Ralstonia pickettii 12J 6287346 YP_001901107.1 CDS Rpic_3556 NC_010682.1 3723221 3724168 D KEGG: rso:RSc3360 hypothetical protein; hypothetical protein 3723221..3724168 Ralstonia pickettii 12J 6286255 YP_001901108.1 CDS Rpic_3557 NC_010682.1 3724281 3725105 D PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B1223 hypothetical protein; aldolase II superfamily protein 3724281..3725105 Ralstonia pickettii 12J 6286256 YP_001901109.1 CDS Rpic_3558 NC_010682.1 3725110 3726087 D ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 3725110..3726087 Ralstonia pickettii 12J 6286257 YP_001901110.1 CDS Rpic_3559 NC_010682.1 3726101 3726904 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: rso:RSc3362 hypothetical protein; Sel1 domain-containing protein repeat-containing protein complement(3726101..3726904) Ralstonia pickettii 12J 6286258 YP_001901111.1 CDS Rpic_3560 NC_010682.1 3726918 3728972 R PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rso:RSc3363 probable 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor transmembrane protein; 5'-nucleotidase complement(3726918..3728972) Ralstonia pickettii 12J 6287173 YP_001901112.1 CDS Rpic_3561 NC_010682.1 3729314 3730108 D blocks the formation of polar Z-ring septums; septum formation inhibitor 3729314..3730108 Ralstonia pickettii 12J 6287174 YP_001901113.1 CDS Rpic_3562 NC_010682.1 3730153 3730974 D TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rso:RSc3365 probable septum site-determining protein MinD; septum site-determining protein MinD 3730153..3730974 Ralstonia pickettii 12J 6287175 YP_001901114.1 CDS Rpic_3563 NC_010682.1 3730989 3731243 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 3730989..3731243 Ralstonia pickettii 12J 6287176 YP_001901115.1 CDS Rpic_3564 NC_010682.1 3731251 3732483 R TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; Citrate synthase; KEGG: dac:Daci_4908 citrate synthase; excisionase family DNA binding domain-containing protein complement(3731251..3732483) Ralstonia pickettii 12J 6289511 YP_001901116.1 CDS Rpic_3565 NC_010682.1 3732642 3734039 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rso:RSc3367 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 3732642..3734039 Ralstonia pickettii 12J 6289512 YP_001901117.1 CDS Rpic_3566 NC_010682.1 3734100 3734957 D PFAM: protein of unknown function DUF519; KEGG: rso:RSc3368 hypothetical protein; hypothetical protein 3734100..3734957 Ralstonia pickettii 12J 6289513 YP_001901118.1 CDS Rpic_3567 NC_010682.1 3735098 3736000 D PFAM: protein of unknown function DUF344; KEGG: bxe:Bxe_B0632 hypothetical protein; hypothetical protein 3735098..3736000 Ralstonia pickettii 12J 6289514 YP_001901119.1 CDS Rpic_3568 NC_010682.1 3736230 3736517 R PFAM: acylphosphatase; KEGG: rso:RSc3370 hypothetical protein; acylphosphatase complement(3736230..3736517) Ralstonia pickettii 12J 6286707 YP_001901120.1 CDS Rpic_3569 NC_010682.1 3736794 3738578 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc3371 putative transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3736794..3738578 Ralstonia pickettii 12J 6286708 YP_001901121.1 CDS Rpic_3570 NC_010682.1 3738655 3740028 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc3372 probable composite ATP-binding transmembrane ABC transporter protein; ABC transporter-like protein 3738655..3740028 Ralstonia pickettii 12J 6286709 YP_001901122.1 CDS algL NC_010682.1 3740220 3741182 D Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export; poly(beta-D-mannuronate) lyase 3740220..3741182 Ralstonia pickettii 12J 6286710 YP_001901123.1 CDS Rpic_3572 NC_010682.1 3741260 3742309 D PFAM: dienelactone hydrolase; KEGG: reu:Reut_B5814 hypothetical protein; dienelactone hydrolase 3741260..3742309 Ralstonia pickettii 12J 6286873 YP_001901124.1 CDS Rpic_3573 NC_010682.1 3742364 3743326 D KEGG: rme:Rmet_3866 putative chromate resistance signal peptide protein; putative chromate resistance signal peptide protein 3742364..3743326 Ralstonia pickettii 12J 6286874 YP_001901125.1 CDS Rpic_3574 NC_010682.1 3743353 3744525 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: reu:Reut_A1521 chromate transporter; chromate transporter 3743353..3744525 Ralstonia pickettii 12J 6286875 YP_001901126.1 CDS Rpic_3575 NC_010682.1 3744548 3744853 R KEGG: rso:RSc3375 hypothetical protein; hypothetical protein complement(3744548..3744853) Ralstonia pickettii 12J 6286876 YP_001901127.1 CDS Rpic_3576 NC_010682.1 3745086 3745544 D PFAM: protein of unknown function DUF1311; KEGG: ccr:CC_2991 hypothetical protein; hypothetical protein 3745086..3745544 Ralstonia pickettii 12J 6286809 YP_001901128.1 CDS Rpic_3577 NC_010682.1 3746030 3746353 D PFAM: regulatory protein ArsR; KEGG: rso:RSp1129 putative arsenical resistance operon repressor transcription regulator protein; ArsR family transcriptional regulator 3746030..3746353 Ralstonia pickettii 12J 6286810 YP_001901129.1 CDS Rpic_3578 NC_010682.1 3746366 3746854 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_A2179 lactoylglutathione lyase; Glyoxalase/bleomycin resistance protein/dioxygenase 3746366..3746854 Ralstonia pickettii 12J 6286811 YP_001901130.1 CDS Rpic_3579 NC_010682.1 3746870 3747364 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rso:RSp1128 putative arsenate reductase (arsenical PUMP modifier) protein; protein tyrosine phosphatase 3746870..3747364 Ralstonia pickettii 12J 6286812 YP_001901131.1 CDS Rpic_3580 NC_010682.1 3747370 3748077 D PFAM: major intrinsic protein; KEGG: rso:RS05492 probable transmembrane ABC transporter protein; major intrinsic protein 3747370..3748077 Ralstonia pickettii 12J 6286476 YP_001901132.1 CDS Rpic_3581 NC_010682.1 3748251 3749159 D PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_1760 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3748251..3749159 Ralstonia pickettii 12J 6286477 YP_001901133.1 CDS Rpic_3582 NC_010682.1 3749590 3749919 D KEGG: mlo:mll4534 hypothetical protein; hypothetical protein 3749590..3749919 Ralstonia pickettii 12J 6286478 YP_001901134.1 CDS Rpic_3583 NC_010682.1 3749975 3750343 R KEGG: rso:RSc3434 hypothetical protein; hypothetical protein complement(3749975..3750343) Ralstonia pickettii 12J 6286479 YP_001901135.1 CDS Rpic_3584 NC_010682.1 3751011 3751484 D KEGG: ava:Ava_4685 hypothetical protein; hypothetical protein 3751011..3751484 Ralstonia pickettii 12J 6286534 YP_001901136.1 CDS Rpic_3585 NC_010682.1 3751616 3752845 D hypothetical protein 3751616..3752845 Ralstonia pickettii 12J 6286535 YP_001901137.1 CDS Rpic_3586 NC_010682.1 3753181 3754281 D PFAM: RelA/SpoT domain protein; KEGG: aha:AHA_3012 region found in RelA / SpoT proteins; RelA/SpoT domain-containing protein 3753181..3754281 Ralstonia pickettii 12J 6286536 YP_001901138.1 CDS Rpic_3587 NC_010682.1 3754648 3755454 D PFAM: conserved hypothetical protein; KEGG: rso:RSc3379 putative transmembrane protein; hypothetical protein 3754648..3755454 Ralstonia pickettii 12J 6286537 YP_001901139.1 CDS Rpic_3588 NC_010682.1 3755486 3755611 D KEGG: rso:RSc3380 hypothetical signal peptide protein; hypothetical protein 3755486..3755611 Ralstonia pickettii 12J 6288643 YP_001901140.1 CDS Rpic_3589 NC_010682.1 3755717 3757489 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase A 3755717..3757489 Ralstonia pickettii 12J 6288644 YP_001901141.1 CDS Rpic_3590 NC_010682.1 3757530 3759746 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase B 3757530..3759746 Ralstonia pickettii 12J 6288645 YP_001901142.1 CDS Rpic_3591 NC_010682.1 3759762 3760385 D One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase C 3759762..3760385 Ralstonia pickettii 12J 6288646 YP_001901143.1 CDS Rpic_3592 NC_010682.1 3761031 3763847 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; KEGG: rso:RSc3385 probable two-component sensor kinase KdpD transcription regulator protein; osmosensitive K+ channel signal transduction histidine kinase 3761031..3763847 Ralstonia pickettii 12J 6287583 YP_001901144.1 CDS Rpic_3593 NC_010682.1 3763985 3764791 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rso:RSc3386 putative outermembrane signal peptide protein; lipoprotein 3763985..3764791 Ralstonia pickettii 12J 6287584 YP_001901145.1 CDS Rpic_3594 NC_010682.1 3765735 3766949 D PFAM: EAL domain protein; response regulator receiver; KEGG: rso:RSc3387 probable two-component response regulator transcription regulator protein; response regulator receiver modulated diguanylate phosphodiesterase 3765735..3766949 Ralstonia pickettii 12J 6287585 YP_001901146.1 CDS Rpic_3595 NC_010682.1 3767192 3767839 D PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; KEGG: rso:RSc3388 probable two-component response regulator transcription regulator protein; two component LuxR family transcriptional regulator 3767192..3767839 Ralstonia pickettii 12J 6287586 YP_001901147.1 CDS Rpic_3596 NC_010682.1 3767850 3768590 R PFAM: major intrinsic protein; KEGG: reh:H16_A3690 glycerol uptake facilitator or related permease; major intrinsic protein complement(3767850..3768590) Ralstonia pickettii 12J 6289575 YP_001901148.1 CDS Rpic_3597 NC_010682.1 3768764 3770230 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr0898 probable ATP-binding protein; major facilitator superfamily protein complement(3768764..3770230) Ralstonia pickettii 12J 6289576 YP_001901149.1 CDS Rpic_3598 NC_010682.1 3770355 3771200 D SMART: helix-turn-helix domain protein; KEGG: bch:Bcen2424_3425 transcriptional regulator, XRE family; XRE family transcriptional regulator 3770355..3771200 Ralstonia pickettii 12J 6289577 YP_001901150.1 CDS Rpic_3599 NC_010682.1 3771205 3771804 R PFAM: isochorismatase hydrolase; KEGG: spe:Spro_2783 isochorismatase hydrolase; hypothetical protein complement(3771205..3771804) Ralstonia pickettii 12J 6289578 YP_001901151.1 CDS Rpic_3600 NC_010682.1 3771828 3772262 R PFAM: thioesterase superfamily protein; KEGG: bam:Bamb_1483 hypothetical protein; thioesterase superfamily protein complement(3771828..3772262) Ralstonia pickettii 12J 6286412 YP_001901152.1 CDS Rpic_3601 NC_010682.1 3772558 3773685 D PFAM: porin Gram-negative type; KEGG: rso:RSc3390 probable porin signal peptide protein; porin 3772558..3773685 Ralstonia pickettii 12J 6286413 YP_001901153.1 CDS Rpic_3602 NC_010682.1 3773704 3774753 R KEGG: rso:RSc3391 hypothetical signal peptide protein; hypothetical protein complement(3773704..3774753) Ralstonia pickettii 12J 6286414 YP_001901154.1 CDS Rpic_3603 NC_010682.1 3774901 3775581 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc3392 probable response regulator transcription regulator protein; winged helix family two component transcriptional regulator 3774901..3775581 Ralstonia pickettii 12J 6286415 YP_001901155.1 CDS Rpic_3604 NC_010682.1 3775559 3777010 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bxe:Bxe_B0497 histidine kinase; histidine kinase 3775559..3777010 Ralstonia pickettii 12J 6289128 YP_001901156.1 CDS Rpic_3605 NC_010682.1 3777041 3777172 R KEGG: shw:Sputw3181_3921 hypothetical protein; hypothetical protein complement(3777041..3777172) Ralstonia pickettii 12J 6289129 YP_001901157.1 CDS Rpic_3606 NC_010682.1 3777235 3777774 R KEGG: bpt:Bpet1645 putative secreted protein; hypothetical protein complement(3777235..3777774) Ralstonia pickettii 12J 6289130 YP_001901158.1 CDS Rpic_3607 NC_010682.1 3777801 3778178 R KEGG: bam:Bamb_5637 hypothetical protein; hypothetical protein complement(3777801..3778178) Ralstonia pickettii 12J 6289131 YP_001901159.1 CDS Rpic_3608 NC_010682.1 3778359 3778838 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rso:RSc3397 hypothetical protein; BadM/Rrf2 family transcriptional regulator complement(3778359..3778838) Ralstonia pickettii 12J 6289467 YP_001901160.1 CDS Rpic_3609 NC_010682.1 3779070 3780275 D PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rso:RSc3398 probable flavohemoprotein (hemoglobin-like) transmembrane; oxidoreductase FAD-binding domain-containing protein 3779070..3780275 Ralstonia pickettii 12J 6289468 YP_001901161.1 CDS Rpic_3610 NC_010682.1 3780296 3781510 D PFAM: NnrS family protein; KEGG: rso:RSc3399 probable transmembrane protein; NnrS family protein 3780296..3781510 Ralstonia pickettii 12J 6289469 YP_001901162.1 CDS Rpic_3611 NC_010682.1 3781584 3783041 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reu:Reut_A1805 regulatory protein GntR, HTH:aminotransferase, class I and II; GntR family transcriptional regulator 3781584..3783041 Ralstonia pickettii 12J 6289470 YP_001901163.1 CDS Rpic_3612 NC_010682.1 3783121 3783558 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rme:Rmet_4317 alkylhydroperoxidase AhpD core; alkylhydroperoxidase 3783121..3783558 Ralstonia pickettii 12J 6288998 YP_001901164.1 CDS Rpic_3613 NC_010682.1 3783607 3784038 D KEGG: smd:Smed_1734 hypothetical protein; hypothetical protein 3783607..3784038 Ralstonia pickettii 12J 6288999 YP_001901165.1 CDS Rpic_3614 NC_010682.1 3784043 3785362 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc3400 probable tranporter transmembrane protein; major facilitator superfamily protein complement(3784043..3785362) Ralstonia pickettii 12J 6289000 YP_001901166.1 CDS Rpic_3615 NC_010682.1 3785538 3786422 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B4604 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator complement(3785538..3786422) Ralstonia pickettii 12J 6289001 YP_001901167.1 CDS Rpic_3616 NC_010682.1 3786538 3787470 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3786538..3787470 Ralstonia pickettii 12J 6286316 YP_001901168.1 CDS Rpic_3617 NC_010682.1 3787609 3788445 D TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bmu:Bmul_3330 allantoin catabolism protein; hypothetical protein 3787609..3788445 Ralstonia pickettii 12J 6286317 YP_001901169.1 CDS Rpic_3618 NC_010682.1 3788563 3788961 D KEGG: pol:Bpro_1225 ISPsy11, transposase OrfA; ISPsy11, transposase OrfA 3788563..3788961 Ralstonia pickettii 12J 6286318 YP_001901170.1 CDS Rpic_3619 NC_010682.1 3788964 3789791 D PFAM: Integrase catalytic region; KEGG: pol:Bpro_3089 integrase, catalytic region; Integrase catalytic subunit 3788964..3789791 Ralstonia pickettii 12J 6286319 YP_001901171.1 CDS Rpic_3620 NC_010682.1 3789850 3790455 R KEGG: bur:Bcep18194_B2805 trans-aconitate 2-methyltransferase; Trans-aconitate 2-methyltransferase complement(3789850..3790455) Ralstonia pickettii 12J 6287547 YP_001901172.1 CDS Rpic_3621 NC_010682.1 3790561 3790698 D KEGG: bur:Bcep18194_B2806 transcriptional regulator, LysR family; LysR family transcriptional regulator 3790561..3790698 Ralstonia pickettii 12J 6287548 YP_001901173.1 CDS Rpic_3622 NC_010682.1 3790754 3791062 R KEGG: rso:RSc0320 hypothetical protein; hypothetical protein complement(3790754..3791062) Ralstonia pickettii 12J 6287549 YP_001901174.1 CDS Rpic_3623 NC_010682.1 3791243 3791620 D KEGG: rso:RS03926 hypothetical protein; hypothetical protein 3791243..3791620 Ralstonia pickettii 12J 6287550 YP_001901175.1 CDS Rpic_3624 NC_010682.1 3791772 3792635 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bte:BTH_I0180 hypothetical protein; hypothetical protein 3791772..3792635 Ralstonia pickettii 12J 6289258 YP_001901176.1 CDS Rpic_3625 NC_010682.1 3792654 3793973 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RSc3403 probable two-component sensor kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase complement(3792654..3793973) Ralstonia pickettii 12J 6289259 YP_001901177.1 CDS Rpic_3626 NC_010682.1 3793970 3794635 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc3404 probable response regulator transcription regulator protein; winged helix family two component transcriptional regulator complement(3793970..3794635) Ralstonia pickettii 12J 6289260 YP_001901178.1 CDS Rpic_3627 NC_010682.1 3794783 3795172 R KEGG: reu:Reut_B4031 hypothetical protein; hypothetical protein complement(3794783..3795172) Ralstonia pickettii 12J 6289261 YP_001901179.1 CDS Rpic_3628 NC_010682.1 3795275 3795712 R PFAM: UspA domain protein; KEGG: rme:Rmet_0458 UspA; UspA domain-containing protein complement(3795275..3795712) Ralstonia pickettii 12J 6288695 YP_001901180.1 CDS Rpic_3629 NC_010682.1 3795895 3796338 D PFAM: thioesterase superfamily protein; KEGG: xau:Xaut_1411 thioesterase superfamily protein; thioesterase superfamily protein 3795895..3796338 Ralstonia pickettii 12J 6288696 YP_001901181.1 CDS Rpic_3630 NC_010682.1 3796448 3796669 D KEGG: rso:RSc0126 hypothetical/unknown protein; hypothetical protein 3796448..3796669 Ralstonia pickettii 12J 6288697 YP_001901182.1 CDS Rpic_3631 NC_010682.1 3796734 3797333 R hypothetical protein complement(3796734..3797333) Ralstonia pickettii 12J 6288698 YP_001901183.1 CDS Rpic_3632 NC_010682.1 3797358 3797663 R KEGG: rso:RS04814 probable transmembrane protein; hypothetical protein complement(3797358..3797663) Ralstonia pickettii 12J 6288254 YP_001901184.1 CDS Rpic_3633 NC_010682.1 3797692 3798096 R KEGG: bpd:BURPS668_0383 hypothetical protein; hypothetical protein complement(3797692..3798096) Ralstonia pickettii 12J 6288255 YP_001901185.1 CDS Rpic_3634 NC_010682.1 3798093 3798377 R KEGG: rso:RSc0125 hypothetical protein; hypothetical protein complement(3798093..3798377) Ralstonia pickettii 12J 6288256 YP_001901186.1 CDS Rpic_3635 NC_010682.1 3798853 3799137 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 3798853..3799137 Ralstonia pickettii 12J 6288257 YP_001901187.1 CDS Rpic_3636 NC_010682.1 3799198 3800085 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mll2505 probable transcriptional regulator; LysR family transcriptional regulator complement(3799198..3800085) Ralstonia pickettii 12J 6287971 YP_001901188.1 CDS Rpic_3637 NC_010682.1 3800439 3802169 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rso:RSc0123 putative alcohol dehydrogenase oxidoreductase protein; glucose-methanol-choline oxidoreductase 3800439..3802169 Ralstonia pickettii 12J 6287972 YP_001901189.1 CDS Rpic_3638 NC_010682.1 3802453 3803361 R PFAM: extracellular solute-binding protein family 3; KEGG: rso:RSc0122 probable substrate-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein complement(3802453..3803361) Ralstonia pickettii 12J 6287973 YP_001901190.1 CDS Rpic_3639 NC_010682.1 3803685 3805346 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc0121 putative oxidoreductase flavoprotein FAD; acyl-CoA dehydrogenase domain-containing protein complement(3803685..3805346) Ralstonia pickettii 12J 6287974 YP_001901191.1 CDS Rpic_3640 NC_010682.1 3805973 3810994 D TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: cell surface receptor IPT/TIG domain protein; Autotransporter beta- domain protein; Ig family protein; KEGG: rso:RSc0115 putative hemagglutinin-related protein; outer membrane autotransporter barrel domain-containing protein 3805973..3810994 Ralstonia pickettii 12J 6288025 YP_001901192.1 CDS Rpic_3641 NC_010682.1 3811068 3812228 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RSc0114 hypothetical protein; 2-nitropropane dioxygenase complement(3811068..3812228) Ralstonia pickettii 12J 6288026 YP_001901193.1 CDS Rpic_3642 NC_010682.1 3812645 3814552 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 3812645..3814552 Ralstonia pickettii 12J 6288027 YP_001901194.1 CDS Rpic_3643 NC_010682.1 3814565 3815710 D PFAM: FAD dependent oxidoreductase; KEGG: rso:RSc0112 putative D-amino acid oxidase flavoprotein oxidoreductase; FAD dependent oxidoreductase 3814565..3815710 Ralstonia pickettii 12J 6289507 YP_001901195.1 CDS Rpic_3644 NC_010682.1 3815707 3815922 D with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 3815707..3815922 Ralstonia pickettii 12J 6289508 YP_001901196.1 CDS thiG NC_010682.1 3815932 3816759 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 3815932..3816759 Ralstonia pickettii 12J 6289509 YP_001901197.1 CDS Rpic_3646 NC_010682.1 3816756 3817910 D PFAM: thiamine monophosphate synthase; KEGG: rso:RSc0108 probable thiamine-phosphate pyrophosphorylase protein; thiamine monophosphate synthase 3816756..3817910 Ralstonia pickettii 12J 6289510 YP_001901198.1 CDS Rpic_3647 NC_010682.1 3818036 3818515 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rso:RSc0107 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 3818036..3818515 Ralstonia pickettii 12J 6286893 YP_001901199.1 CDS Rpic_3648 NC_010682.1 3818739 3821156 D KEGG: reh:H16_A0657 hypothetical protein; hypothetical protein 3818739..3821156 Ralstonia pickettii 12J 6286894 YP_001901200.1 CDS Rpic_3649 NC_010682.1 3821265 3822764 D KEGG: reh:H16_A0658 hypothetical protein; hypothetical protein 3821265..3822764 Ralstonia pickettii 12J 6286895 YP_001901201.1 CDS Rpic_3650 NC_010682.1 3822783 3823142 R KEGG: rso:RSc0101 putative lipoprotein transmembrane; putative transmembrane lipoprotein complement(3822783..3823142) Ralstonia pickettii 12J 6286896 YP_001901202.1 CDS Rpic_3651 NC_010682.1 3823157 3824068 R TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rso:RSc0100 probable bifunctional protein: hydroxy-phosphomethylpyrimidine kinase and hydroxy-methylpyrimidine kinase; phosphomethylpyrimidine kinase complement(3823157..3824068) Ralstonia pickettii 12J 6286897 YP_001901203.1 CDS Rpic_3652 NC_010682.1 3824333 3825028 R KEGG: rso:RSc0099 putative signal peptide protein; putative signal peptide protein complement(3824333..3825028) Ralstonia pickettii 12J 6287840 YP_001901204.1 CDS Rpic_3653 NC_010682.1 3825104 3826498 R PFAM: Alkaline phosphatase; KEGG: rso:RSc0098 putative alkaline phosphatase signal peptide protein; alkaline phosphatase complement(3825104..3826498) Ralstonia pickettii 12J 6287841 YP_001901205.1 CDS Rpic_3654 NC_010682.1 3826515 3827972 R PFAM: Alkaline phosphatase; KEGG: rso:RSc0097 putative alkaline phosphatase lipoprotein transmembrane; alkaline phosphatase complement(3826515..3827972) Ralstonia pickettii 12J 6287842 YP_001901206.1 CDS Rpic_3656 NC_010682.1 3829178 3830602 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 3829178..3830602 Ralstonia pickettii 12J 6287864 YP_001901207.1 CDS Rpic_3657 NC_010682.1 3830657 3831001 D PFAM: membrane protein of unknown function; KEGG: rso:RSc0092 probable transmembrane protein; hypothetical protein 3830657..3831001 Ralstonia pickettii 12J 6287865 YP_001901208.1 CDS Rpic_3658 NC_010682.1 3831012 3831842 D KEGG: rso:RSc0091 probable 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 3831012..3831842 Ralstonia pickettii 12J 6287866 YP_001901209.1 CDS Rpic_3659 NC_010682.1 3831872 3832339 D PFAM: TfoX domain protein; KEGG: rso:RSc0090 hypothetical protein; TfoX domain-containing protein 3831872..3832339 Ralstonia pickettii 12J 6287867 YP_001901210.1 CDS Rpic_3660 NC_010682.1 3832344 3832958 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bxe:Bxe_B2212 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like protein complement(3832344..3832958) Ralstonia pickettii 12J 6286285 YP_001901211.1 CDS Rpic_3661 NC_010682.1 3832976 3833581 R PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rso:RSc0089 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase complement(3832976..3833581) Ralstonia pickettii 12J 6286286 YP_001901212.1 CDS Rpic_3662 NC_010682.1 3833625 3835577 D PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc0088 probable soluble lytic murein transglycosylase precursor transmembrane protein; lytic transglycosylase catalytic subunit 3833625..3835577 Ralstonia pickettii 12J 6286287 YP_001901213.1 CDS Rpic_3663 NC_010682.1 3835761 3836765 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rso:RSc0087 putative NADH-ubiquinone oxidoreductase oxidoreductase protein; NADH dehydrogenase 3835761..3836765 Ralstonia pickettii 12J 6286288 YP_001901214.1 CDS Rpic_3664 NC_010682.1 3836990 3837679 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0086 hypothetical protein; glutathione S-transferase domain-containing protein 3836990..3837679 Ralstonia pickettii 12J 6287401 YP_001901215.1 CDS cca NC_010682.1 3837676 3838962 D catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3837676..3838962 Ralstonia pickettii 12J 6287402 YP_001901216.1 CDS Rpic_3666 NC_010682.1 3838993 3839898 R PFAM: extracellular solute-binding protein family 3; KEGG: rso:RSc0084 probable amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein complement(3838993..3839898) Ralstonia pickettii 12J 6287403 YP_001901217.1 CDS Rpic_3667 NC_010682.1 3839982 3840818 R PFAM: protein of unknown function DUF849; KEGG: rso:RSc0083 hypothetical protein; hypothetical protein complement(3839982..3840818) Ralstonia pickettii 12J 6287404 YP_001901218.1 CDS Rpic_3668 NC_010682.1 3840812 3842167 R PFAM: aminotransferase class-III; KEGG: rso:RSc0082 hypothetical protein; hypothetical protein complement(3840812..3842167) Ralstonia pickettii 12J 6287665 YP_001901219.1 CDS Rpic_3669 NC_010682.1 3842184 3843092 R PFAM: sugar isomerase (SIS); KEGG: rso:RSc0081 hypothetical protein; RpiR family transcriptional regulator complement(3842184..3843092) Ralstonia pickettii 12J 6287666 YP_001901220.1 CDS Rpic_3670 NC_010682.1 3843276 3843581 R KEGG: rso:RSc0080 probable transmembrane protein; hypothetical protein complement(3843276..3843581) Ralstonia pickettii 12J 6287667 YP_001901221.1 CDS Rpic_3671 NC_010682.1 3844011 3844721 R PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: rso:RSc0078 probable two component response regulator transcription regulator protein; two component Fis family transcriptional regulator complement(3844011..3844721) Ralstonia pickettii 12J 6286746 YP_001901222.1 CDS Rpic_3672 NC_010682.1 3844758 3847229 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: rso:RSc0077 probable two component sensor histidine kinase transcription regulator protein; multi-sensor signal transduction histidine kinase complement(3844758..3847229) Ralstonia pickettii 12J 6286747 YP_001901223.1 CDS Rpic_3673 NC_010682.1 3847226 3847996 R KEGG: rso:RSc0076 probable proline rich signal peptide protein; putative proline rich signal peptide protein complement(3847226..3847996) Ralstonia pickettii 12J 6286748 YP_001901224.1 CDS Rpic_3674 NC_010682.1 3848010 3849341 R TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: rso:RSc0075 putative RNA methyltransferase (SUN protein); sun protein complement(3848010..3849341) Ralstonia pickettii 12J 6288932 YP_001901225.1 CDS Rpic_3675 NC_010682.1 3849445 3850305 R PFAM: peptidase M48 Ste24p; KEGG: rso:RSc0074 heat shock protein HtpX; M48 family peptidase complement(3849445..3850305) Ralstonia pickettii 12J 6288933 YP_001901226.1 CDS Rpic_3676 NC_010682.1 3850426 3851082 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc0073 probable transporter transmembrane protein; Lysine exporter protein LysE/YggA complement(3850426..3851082) Ralstonia pickettii 12J 6288934 YP_001901227.1 CDS fmt NC_010682.1 3851114 3852097 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(3851114..3852097) Ralstonia pickettii 12J 6288935 YP_001901228.1 CDS Rpic_3678 NC_010682.1 3852155 3854179 R KEGG: rso:RSc0071 probable transmembrane protein; hypothetical protein complement(3852155..3854179) Ralstonia pickettii 12J 6287764 YP_001901229.1 CDS def NC_010682.1 3854190 3854705 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(3854190..3854705) Ralstonia pickettii 12J 6287765 YP_001901230.1 CDS Rpic_3680 NC_010682.1 3854958 3856145 D PFAM: Peptidoglycan-binding LysM; KEGG: rso:RSc0069 probable signal peptide protein; peptidoglycan-binding LysM 3854958..3856145 Ralstonia pickettii 12J 6287766 YP_001901231.1 CDS Rpic_3681 NC_010682.1 3856171 3857379 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rso:RSc0068 probable smf protein; DNA protecting protein DprA 3856171..3857379 Ralstonia pickettii 12J 6287767 YP_001901232.1 CDS Rpic_3682 NC_010682.1 3857441 3857821 D PFAM: Thioredoxin domain; KEGG: rso:RSc0067 putative thioredoxin-like protein; Thioredoxin domain 3857441..3857821 Ralstonia pickettii 12J 6288222 YP_001901233.1 CDS Rpic_3683 NC_010682.1 3858075 3860705 D decatenates replicating daughter chromosomes; DNA topoisomerase III 3858075..3860705 Ralstonia pickettii 12J 6288223 YP_001901234.1 CDS Rpic_3684 NC_010682.1 3860780 3861718 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0065 probable transcription regulator protein; LysR family transcriptional regulator complement(3860780..3861718) Ralstonia pickettii 12J 6288224 YP_001901235.1 CDS Rpic_3685 NC_010682.1 3862171 3863859 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RSc0064 putative long-chain-fatty-acid--CoA ligase protein; AMP-dependent synthetase and ligase 3862171..3863859 Ralstonia pickettii 12J 6288225 YP_001901236.1 CDS Rpic_3686 NC_010682.1 3863896 3865047 R TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: rso:RSc0063 probable rod shape-determining (RodA protein) transmembrane; rod shape-determining protein RodA complement(3863896..3865047) Ralstonia pickettii 12J 6289826 YP_001901237.1 CDS Rpic_3687 NC_010682.1 3865071 3867476 R KEGG: rso:RSc0062 probable substrate-binding transmembrane protein; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 complement(3865071..3867476) Ralstonia pickettii 12J 6289827 YP_001901238.1 CDS Rpic_3688 NC_010682.1 3867519 3868031 R TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: rso:RSc0061 probable rod shape-determining MreD transmembrane protein; rod shape-determining protein MreD complement(3867519..3868031) Ralstonia pickettii 12J 6289828 YP_001901239.1 CDS Rpic_3689 NC_010682.1 3868048 3869094 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(3868048..3869094) Ralstonia pickettii 12J 6289829 YP_001901240.1 CDS Rpic_3690 NC_010682.1 3869334 3870377 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(3869334..3870377) Ralstonia pickettii 12J 6289331 YP_001901241.1 CDS gatC NC_010682.1 3870876 3871175 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 3870876..3871175 Ralstonia pickettii 12J 6289332 YP_001901242.1 CDS gatA NC_010682.1 3871274 3872773 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 3871274..3872773 Ralstonia pickettii 12J 6289333 YP_001901243.1 CDS Rpic_3693 NC_010682.1 3872813 3873298 D KEGG: rso:RSc0056 probable lipoprotein; putative lipoprotein 3872813..3873298 Ralstonia pickettii 12J 6289334 YP_001901244.1 CDS Rpic_3694 NC_010682.1 3873295 3874260 D PFAM: dienelactone hydrolase; KEGG: rso:RSc0055 hypothetical signal peptide protein; dienelactone hydrolase 3873295..3874260 Ralstonia pickettii 12J 6287351 YP_001901245.1 CDS gatB NC_010682.1 3874346 3875812 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 3874346..3875812 Ralstonia pickettii 12J 6287352 YP_001901246.1 CDS Rpic_3696 NC_010682.1 3875827 3876516 D PFAM: protein of unknown function DUF484; KEGG: rso:RSc0053 hypothetical protein; hypothetical protein 3875827..3876516 Ralstonia pickettii 12J 6287353 YP_001901247.1 CDS xerC NC_010682.1 3876531 3877517 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3876531..3877517 Ralstonia pickettii 12J 6287354 YP_001901248.1 CDS Rpic_3698 NC_010682.1 3877557 3878759 D SMART: PUA domain containing protein; KEGG: rso:RSc0051 hypothetical protein; PUA domain-containing protein 3877557..3878759 Ralstonia pickettii 12J 6286869 YP_001901249.1 CDS Rpic_3699 NC_010682.1 3878808 3879356 D KEGG: bpl:BURPS1106A_A1741 hypothetical protein; hypothetical protein 3878808..3879356 Ralstonia pickettii 12J 6286870 YP_001901250.1 CDS Rpic_3700 NC_010682.1 3879489 3881015 D PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: rso:RSc0050 hypothetical protein; Berberine/berberine domain-containing protein 3879489..3881015 Ralstonia pickettii 12J 6286871 YP_001901251.1 CDS Rpic_3701 NC_010682.1 3881028 3882266 D KEGG: rso:RSc0049 putative hemaggltinin-related protein; 6-phosphogluconolactonase 3881028..3882266 Ralstonia pickettii 12J 6286872 YP_001901252.1 CDS Rpic_3702 NC_010682.1 3882363 3882890 D PFAM: ferric-uptake regulator; KEGG: rso:RSc0048 putative transcription regulator protein; Fur family ferric uptake regulator 3882363..3882890 Ralstonia pickettii 12J 6287609 YP_001901253.1 CDS Rpic_3703 NC_010682.1 3882878 3883966 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rso:RSc0047 hypothetical protein; cobalamin synthesis protein P47K 3882878..3883966 Ralstonia pickettii 12J 6287610 YP_001901254.1 CDS Rpic_3704 NC_010682.1 3884136 3884807 D TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: rme:Rmet_0126 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator 3884136..3884807 Ralstonia pickettii 12J 6287611 YP_001901255.1 CDS Rpic_3705 NC_010682.1 3884908 3886215 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rso:RSc0045 hypothetical protein; cobalamin synthesis protein P47K 3884908..3886215 Ralstonia pickettii 12J 6287612 YP_001901256.1 CDS Rpic_3706 NC_010682.1 3886316 3887917 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc0044 probable substrate-binding periplasmic (PBP) ABC transporter protein; family 5 extracellular solute-binding protein 3886316..3887917 Ralstonia pickettii 12J 6288362 YP_001901257.1 CDS Rpic_3707 NC_010682.1 3888075 3888611 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 3888075..3888611 Ralstonia pickettii 12J 6288363 YP_001901258.1 CDS hslU NC_010682.1 3888638 3889969 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 3888638..3889969 Ralstonia pickettii 12J 6288364 YP_001901259.1 CDS Rpic_3709 NC_010682.1 3890186 3890800 D KEGG: reh:H16_B0584 conserved hypothetical periplasmic protein; hypothetical protein 3890186..3890800 Ralstonia pickettii 12J 6288365 YP_001901260.1 CDS Rpic_3710 NC_010682.1 3890879 3891082 D PFAM: CsbD family protein; KEGG: reh:H16_B0585 hypothetical protein; CsbD family protein 3890879..3891082 Ralstonia pickettii 12J 6287605 YP_001901261.1 CDS Rpic_3711 NC_010682.1 3891116 3891694 R PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: rso:RSc0040 probable response regulator transcription regulator protein; two component Fis family transcriptional regulator complement(3891116..3891694) Ralstonia pickettii 12J 6287606 YP_001901262.1 CDS Rpic_3712 NC_010682.1 3891743 3893089 R PFAM: ATP-binding region ATPase domain protein; KEGG: rso:RSc0039 probable transmembrane sensor histidine kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase complement(3891743..3893089) Ralstonia pickettii 12J 6287607 YP_001901263.1 CDS Rpic_3713 NC_010682.1 3893231 3893725 D PFAM: protein of unknown function DUF461; KEGG: rso:RSc0038 putative transmembrane protein; hypothetical protein 3893231..3893725 Ralstonia pickettii 12J 6287608 YP_001901264.1 CDS Rpic_3714 NC_010682.1 3893772 3893993 D KEGG: rso:RSc0037 hypothetical protein; hypothetical protein 3893772..3893993 Ralstonia pickettii 12J 6288202 YP_001901265.1 CDS Rpic_3715 NC_010682.1 3894210 3894422 R KEGG: rso:RSc0035 hypothetical protein; hypothetical protein complement(3894210..3894422) Ralstonia pickettii 12J 6288203 YP_001901266.1 CDS Rpic_3716 NC_010682.1 3894457 3895050 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(3894457..3895050) Ralstonia pickettii 12J 6288204 YP_001901267.1 CDS Rpic_3717 NC_010682.1 3895226 3896152 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 3895226..3896152 Ralstonia pickettii 12J 6288205 YP_001901268.1 CDS Rpic_3718 NC_010682.1 3896152 3897009 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc0032 hypothetical protein; pyrimidine 5'-nucleotidase 3896152..3897009 Ralstonia pickettii 12J 6289628 YP_001901269.1 CDS slmA NC_010682.1 3897055 3897705 D FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 3897055..3897705 Ralstonia pickettii 12J 6289629 YP_001901270.1 CDS Rpic_3720 NC_010682.1 3897768 3899291 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rso:RSc0030 putative transcription regulator protein; GntR family transcriptional regulator complement(3897768..3899291) Ralstonia pickettii 12J 6289630 YP_001901271.1 CDS Rpic_3721 NC_010682.1 3899445 3900725 D TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: rso:RSc0029 probable 4-aminobutyrate aminotransferase protein; 4-aminobutyrate aminotransferase 3899445..3900725 Ralstonia pickettii 12J 6289631 YP_001901272.1 CDS Rpic_3722 NC_010682.1 3900730 3902232 D TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RSc0028 probable succinate-semialdehyde dehydrogenase oxidoreductase protein; succinate-semialdehyde dehydrogenase 3900730..3902232 Ralstonia pickettii 12J 6288182 YP_001901273.1 CDS metX NC_010682.1 3902511 3903725 D Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 3902511..3903725 Ralstonia pickettii 12J 6288183 YP_001901274.1 CDS Rpic_3724 NC_010682.1 3903722 3904357 D TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc0026 hypothetical protein; methionine biosynthesis protein MetW 3903722..3904357 Ralstonia pickettii 12J 6288184 YP_001901275.1 CDS Rpic_3725 NC_010682.1 3904459 3905205 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: rso:RSc0024 putative signal peptide protein; Sel1 domain-containing protein repeat-containing protein 3904459..3905205 Ralstonia pickettii 12J 6288185 YP_001901276.1 CDS Rpic_3726 NC_010682.1 3905281 3905475 R PFAM: protein of unknown function DUF466; KEGG: rso:RSc0023 hypothetical protein; hypothetical protein complement(3905281..3905475) Ralstonia pickettii 12J 6289555 YP_001901277.1 CDS Rpic_3727 NC_010682.1 3905484 3907538 R PFAM: carbon starvation protein CstA; KEGG: rso:RSc0022 probable carbon starvation A transmembrane protein; carbon starvation protein CstA complement(3905484..3907538) Ralstonia pickettii 12J 6289556 YP_001901278.1 CDS Rpic_3728 NC_010682.1 3907738 3909204 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Cache type 2 domain protein; KEGG: rso:RSc0021 probable transmembrane sensor histidine kinase transcription regulator protein; integral membrane sensor signal transduction histidine kinase 3907738..3909204 Ralstonia pickettii 12J 6289557 YP_001901279.1 CDS Rpic_3729 NC_010682.1 3909201 3909845 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bpl:BURPS1106A_A3133 DNA-binding response regulator, LuxR family; two component LuxR family transcriptional regulator 3909201..3909845 Ralstonia pickettii 12J 6289558 YP_001901280.1 CDS Rpic_3730 NC_010682.1 3909842 3910825 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: rme:Rmet_1840 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(3909842..3910825) Ralstonia pickettii 12J 6287125 YP_001901281.1 CDS Rpic_3731 NC_010682.1 3910959 3911675 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_A1428 regulatory protein GntR, HTH:GntR, C-terminal; GntR family transcriptional regulator 3910959..3911675 Ralstonia pickettii 12J 6287126 YP_001901282.1 CDS Rpic_3732 NC_010682.1 3911691 3912602 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: vei:Veis_3388 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 3911691..3912602 Ralstonia pickettii 12J 6287127 YP_001901283.1 CDS Rpic_3733 NC_010682.1 3912599 3913912 D PFAM: type III effector Hrp-dependent outers; KEGG: bam:Bamb_4551 type III effector Hrp-dependent outers; Hrp-dependent type III effector protein 3912599..3913912 Ralstonia pickettii 12J 6287128 YP_001901284.1 CDS Rpic_3734 NC_010682.1 3913909 3914553 D PFAM: class II aldolase/adducin family protein; KEGG: rme:Rmet_1837 putative aldolase; putative aldolase 3913909..3914553 Ralstonia pickettii 12J 6287539 YP_001901285.1 CDS Rpic_3735 NC_010682.1 3914619 3915944 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0475 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein 3914619..3915944 Ralstonia pickettii 12J 6287540 YP_001901286.1 CDS Rpic_3736 NC_010682.1 3915968 3916756 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rso:RSc0020 hypothetical protein; Hydroxypyruvate isomerase 3915968..3916756 Ralstonia pickettii 12J 6287541 YP_001901287.1 CDS Rpic_3737 NC_010682.1 3916884 3917720 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc0018 probable response regulator transcription regulator protein; winged helix family two component transcriptional regulator complement(3916884..3917720) Ralstonia pickettii 12J 6287542 YP_001901288.1 CDS Rpic_3738 NC_010682.1 3917894 3918187 D hypothetical protein 3917894..3918187 Ralstonia pickettii 12J 6286861 YP_001901289.1 CDS Rpic_3739 NC_010682.1 3918585 3920453 R catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase complement(3918585..3920453) Ralstonia pickettii 12J 6286862 YP_001901290.1 CDS Rpic_3740 NC_010682.1 3920880 3921908 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rso:RSc0016 putative D-3-phosphoglycerate dehydrogenase oxidoreductase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3920880..3921908 Ralstonia pickettii 12J 6286863 YP_001901291.1 CDS Rpic_3741 NC_010682.1 3921940 3922830 R PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: rso:RSc0015 hypothetical protein; extradiol ring-cleavage dioxygenase class III protein subunit B complement(3921940..3922830) Ralstonia pickettii 12J 6286864 YP_001901292.1 CDS Rpic_3742 NC_010682.1 3922932 3924356 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rso:RSc0014 probable glutathione reductase oxidoreductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3922932..3924356) Ralstonia pickettii 12J 6286885 YP_001901293.1 CDS Rpic_3743 NC_010682.1 3924462 3925355 R PFAM: Patatin; KEGG: rso:RSc0013 hypothetical protein; patatin complement(3924462..3925355) Ralstonia pickettii 12J 6286886 YP_001901294.1 CDS Rpic_3744 NC_010682.1 3925352 3926023 R PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: rso:RSc0012 putative AcrAB operon repressor transcription regulator protein; TetR family transcriptional regulator complement(3925352..3926023) Ralstonia pickettii 12J 6286887 YP_001901295.1 CDS Rpic_3745 NC_010682.1 3926595 3927866 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSc0011 probable acriflavin resistance lipoprotein A precursor; RND family efflux transporter MFP subunit 3926595..3927866 Ralstonia pickettii 12J 6286888 YP_001901296.1 CDS Rpic_3746 NC_010682.1 3927882 3931034 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rso:RSc0010 putative acriflavin resistance transmembrane protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3927882..3931034 Ralstonia pickettii 12J 6287629 YP_001901297.1 CDS Rpic_3747 NC_010682.1 3931037 3932581 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RSc0009 probable drug efflux lipoprotein; NodT family RND efflux system outer membrane lipoprotein 3931037..3932581 Ralstonia pickettii 12J 6287630 YP_001901298.1 CDS Rpic_3748 NC_010682.1 3932615 3933706 R KEGG: pmy:Pmen_2775 DNA topoisomerase; DNA topoisomerase complement(3932615..3933706) Ralstonia pickettii 12J 6287631 YP_001901299.1 CDS rpsU NC_010682.1 3933953 3934165 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3933953..3934165 Ralstonia pickettii 12J 6287632 YP_001901300.1 CDS Rpic_3750 NC_010682.1 3934505 3934756 D KEGG: bur:Bcep18194_A5683 hypothetical protein; hypothetical protein 3934505..3934756 Ralstonia pickettii 12J 6286617 YP_001901301.1 CDS Rpic_3752 NC_010682.1 3935079 3935738 R KEGG: bch:Bcen2424_4468 hypothetical protein; hypothetical protein complement(3935079..3935738) Ralstonia pickettii 12J 6286619 YP_001901302.1 CDS Rpic_3754 NC_010682.1 3937150 3937548 R PFAM: NUDIX hydrolase; KEGG: stp:Strop_1988 NUDIX hydrolase; NUDIX hydrolase complement(3937150..3937548) Ralstonia pickettii 12J 6287571 YP_001901303.1 CDS trmE NC_010682.1 3937554 3938999 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3937554..3938999) Ralstonia pickettii 12J 6287572 YP_001901304.1 CDS Rpic_3756 NC_010682.1 3939059 3939457 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_5189 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 3939059..3939457 Ralstonia pickettii 12J 6287573 YP_001901305.1 CDS Rpic_3757 NC_010682.1 3939531 3941195 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC complement(3939531..3941195) Ralstonia pickettii 12J 6287574 YP_001901306.1 CDS Rpic_3758 NC_010682.1 3941202 3941639 R PFAM: protein of unknown function DUF37; KEGG: rso:RSc0003 hypothetical protein; hypothetical protein complement(3941202..3941639) Ralstonia pickettii 12J 6286843 YP_001901307.1 CDS Rpic_3759 NC_010682.1 3941636 3942058 R TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: rso:RSc0002 probable ribonuclease P protein component; ribonuclease P protein component complement(3941636..3942058) Ralstonia pickettii 12J 6286844 YP_001901308.1 CDS rpmH NC_010682.1 3942121 3942255 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(3942121..3942255) Ralstonia pickettii 12J 6286845 YP_001901309.1 CDS Rpic_4948 NC_010683.1 25 249 R hypothetical protein complement(25..249) Ralstonia pickettii 12J 6289871 YP_001901310.1 CDS Rpic_4949 NC_010683.1 246 617 R KEGG: reh:H16_B1861 PemK-like protein DNA binding protein; transcriptional modulator of MazE/toxin MazF complement(246..617) Ralstonia pickettii 12J 6289940 YP_001901311.1 CDS Rpic_4950 NC_010683.1 604 834 R hypothetical protein complement(604..834) Ralstonia pickettii 12J 6289941 YP_001901312.1 CDS Rpic_4951 NC_010683.1 1045 1335 D hypothetical protein 1045..1335 Ralstonia pickettii 12J 6289942 YP_001901313.1 CDS Rpic_4952 NC_010683.1 1344 3077 D PFAM: integrase family protein; KEGG: bch:Bcen2424_6892 phage integrase family protein; integrase family protein 1344..3077 Ralstonia pickettii 12J 6289921 YP_001901314.1 CDS Rpic_4953 NC_010683.1 3380 3829 R hypothetical protein complement(3380..3829) Ralstonia pickettii 12J 6289943 YP_001901315.1 CDS Rpic_4954 NC_010683.1 3981 4238 R hypothetical protein complement(3981..4238) Ralstonia pickettii 12J 6289944 YP_001901316.1 CDS Rpic_4955 NC_010683.1 4276 4689 R hypothetical protein complement(4276..4689) Ralstonia pickettii 12J 6289945 YP_001901317.1 CDS Rpic_4956 NC_010683.1 4768 5124 R KEGG: xac:XAC2421 hypothetical protein; hypothetical protein complement(4768..5124) Ralstonia pickettii 12J 6289946 YP_001901318.1 CDS Rpic_4957 NC_010683.1 5213 5410 R hypothetical protein complement(5213..5410) Ralstonia pickettii 12J 6289947 YP_001901319.1 CDS Rpic_4958 NC_010683.1 5460 5765 R KEGG: bvi:Bcep1808_6716 hypothetical protein; hypothetical protein complement(5460..5765) Ralstonia pickettii 12J 6289948 YP_001901320.1 CDS Rpic_4959 NC_010683.1 5817 6056 R hypothetical protein complement(5817..6056) Ralstonia pickettii 12J 6289931 YP_001901321.1 CDS Rpic_4960 NC_010683.1 6096 6737 R KEGG: sgl:SG0619 hypothetical protein; hypothetical protein complement(6096..6737) Ralstonia pickettii 12J 6289932 YP_001901322.1 CDS Rpic_4961 NC_010683.1 6908 7561 R KEGG: swi:Swit_5119 hypothetical protein; hypothetical protein complement(6908..7561) Ralstonia pickettii 12J 6289933 YP_001901323.1 CDS Rpic_4962 NC_010683.1 8340 9095 D PFAM: initiator RepB protein; KEGG: ppd:Ppro_3857 initiator RepB protein; initiator RepB protein 8340..9095 Ralstonia pickettii 12J 6289934 YP_001901324.1 CDS Rpic_4963 NC_010683.1 9507 9929 R hypothetical protein complement(9507..9929) Ralstonia pickettii 12J 6289935 YP_001901325.1 CDS Rpic_4964 NC_010683.1 9907 10635 R KEGG: bch:Bcen2424_0451 hypothetical protein; hypothetical protein complement(9907..10635) Ralstonia pickettii 12J 6289936 YP_001901326.1 CDS Rpic_4965 NC_010683.1 12560 14299 D KEGG: ypm:YP_pCRY22 putative mobilization MobB protein; Type IV secretory pathway VirB4 protein-like protein 12560..14299 Ralstonia pickettii 12J 6289937 YP_001901327.1 CDS Rpic_4966 NC_010683.1 14773 15576 R KEGG: bte:BTH_I2729 hypothetical protein; hypothetical protein complement(14773..15576) Ralstonia pickettii 12J 6289938 YP_001901328.1 CDS Rpic_4967 NC_010683.1 15588 15812 R hypothetical protein complement(15588..15812) Ralstonia pickettii 12J 6289939 YP_001901329.1 CDS Rpic_4968 NC_010683.1 15876 16109 R KEGG: ajs:Ajs_4207 hypothetical protein; hypothetical protein complement(15876..16109) Ralstonia pickettii 12J 6289912 YP_001901330.1 CDS Rpic_4969 NC_010683.1 16207 17094 R KEGG: dar:Daro_2219 ParB-like nuclease; ParB-like nuclease complement(16207..17094) Ralstonia pickettii 12J 6289913 YP_001901331.1 CDS Rpic_4970 NC_010683.1 17491 18699 D PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bch:Bcen2424_5220 AAA ATPase, central domain protein; AAA ATPase 17491..18699 Ralstonia pickettii 12J 6289914 YP_001901332.1 CDS Rpic_4971 NC_010683.1 18990 19823 D PFAM: metallophosphoesterase; KEGG: mms:mma_3037 metallophosphoesterase; metallophosphoesterase 18990..19823 Ralstonia pickettii 12J 6289915 YP_001901333.1 CDS Rpic_4972 NC_010683.1 19859 21121 R KEGG: bmu:Bmul_4729 hypothetical protein; hypothetical protein complement(19859..21121) Ralstonia pickettii 12J 6289916 YP_001901334.1 CDS Rpic_4973 NC_010683.1 21201 21959 R PFAM: Gp37Gp68 family protein; KEGG: pst:PSPTO_0049 hypothetical protein; Gp37Gp68 family protein complement(21201..21959) Ralstonia pickettii 12J 6289917 YP_001901335.1 CDS Rpic_4974 NC_010683.1 21956 22594 R PFAM: peptidase S24 and S26 domain protein; KEGG: mfa:Mfla_1781 putative prophage repressor; peptidase S24 and S26 domain-containing protein complement(21956..22594) Ralstonia pickettii 12J 6289918 YP_001901336.1 CDS Rpic_4975 NC_010683.1 22695 23567 R KEGG: rfr:Rfer_1071 hypothetical protein; hypothetical protein complement(22695..23567) Ralstonia pickettii 12J 6289919 YP_001901337.1 CDS Rpic_4976 NC_010683.1 24012 24365 D KEGG: xac:XAC2421 hypothetical protein; hypothetical protein 24012..24365 Ralstonia pickettii 12J 6289920 YP_001901338.1 CDS Rpic_4977 NC_010683.1 24457 26136 D KEGG: pca:Pcar_0116 hypothetical protein; hypothetical protein 24457..26136 Ralstonia pickettii 12J 6289922 YP_001901339.1 CDS Rpic_4978 NC_010683.1 26095 27168 R KEGG: tcx:Tcr_1645 hypothetical protein; hypothetical protein complement(26095..27168) Ralstonia pickettii 12J 6289923 YP_001901340.1 CDS Rpic_4979 NC_010683.1 27165 28070 R PFAM: TniB family protein; KEGG: asa:ASA_1044 TniB; TniB family protein complement(27165..28070) Ralstonia pickettii 12J 6289924 YP_001901341.1 CDS Rpic_4980 NC_010683.1 28063 29985 R KEGG: asa:ASA_1043 TniA transposase; TniA transposase complement(28063..29985) Ralstonia pickettii 12J 6289925 YP_001901342.1 CDS Rpic_4981 NC_010683.1 29989 30636 R PFAM: TnsA endonuclease; KEGG: rfr:Rfer_3933 hypothetical protein; TnsA endonuclease complement(29989..30636) Ralstonia pickettii 12J 6289926 YP_001901343.1 CDS Rpic_4982 NC_010683.1 31078 32001 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: reu:Reut_B5170 cation efflux protein; cation diffusion facilitator family transporter 31078..32001 Ralstonia pickettii 12J 6289927 YP_001901344.1 CDS Rpic_4983 NC_010683.1 31998 33605 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_5322 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(31998..33605) Ralstonia pickettii 12J 6289928 YP_001901345.1 CDS Rpic_4984 NC_010683.1 33683 34288 D PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: rme:Rmet_5323 two component transcriptional regulator, LuxR family; LuxR family two component transcriptional regulator 33683..34288 Ralstonia pickettii 12J 6289929 YP_001901346.1 CDS Rpic_4985 NC_010683.1 34318 37485 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_5319 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(34318..37485) Ralstonia pickettii 12J 6289930 YP_001901347.1 CDS Rpic_4986 NC_010683.1 37498 38652 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_5320 secretion protein HlyD; RND family efflux transporter MFP subunit complement(37498..38652) Ralstonia pickettii 12J 6289899 YP_001901348.1 CDS Rpic_4987 NC_010683.1 38855 40372 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5321 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 38855..40372 Ralstonia pickettii 12J 6289900 YP_001901349.1 CDS Rpic_4988 NC_010683.1 40426 41214 R KEGG: pnu:Pnuc_1326 hypothetical protein; hypothetical protein complement(40426..41214) Ralstonia pickettii 12J 6289901 YP_001901350.1 CDS Rpic_4989 NC_010683.1 41498 41938 D hypothetical protein 41498..41938 Ralstonia pickettii 12J 6289902 YP_001901351.1 CDS Rpic_4990 NC_010683.1 42016 43659 R PFAM: natural resistance-associated macrophage protein; KEGG: rso:RSp0027 putative manganese transport transmembrane protein; natural resistance-associated macrophage protein complement(42016..43659) Ralstonia pickettii 12J 6289903 YP_001901352.1 CDS Rpic_4991 NC_010683.1 43703 43909 R KEGG: rso:RS02001 hypothetical protein; hypothetical protein complement(43703..43909) Ralstonia pickettii 12J 6289904 YP_001901353.1 CDS Rpic_4992 NC_010683.1 44304 45800 R PFAM: Carbohydrate-selective porin OprB; KEGG: rso:RSc1195 hypothetical protein; carbohydrate-selective porin OprB complement(44304..45800) Ralstonia pickettii 12J 6289905 YP_001901354.1 CDS Rpic_4994 NC_010683.1 47099 48241 R PFAM: ParB domain protein nuclease; KEGG: aav:Aave_0680 ParB domain protein nuclease; ParB domain-containing protein nuclease complement(47099..48241) Ralstonia pickettii 12J 6289898 YP_001901355.1 CDS Rpic_4995 NC_010683.1 48307 49134 R PFAM: protein of unknown function DUF932; KEGG: ajs:Ajs_4210 protein of unknown function DUF932; hypothetical protein complement(48307..49134) Ralstonia pickettii 12J 6289907 YP_001901356.1 CDS Rpic_4996 NC_010683.1 49331 49894 R KEGG: mdo:100032658 hypothetical protein LOC100032658; hypothetical protein complement(49331..49894) Ralstonia pickettii 12J 6289908 YP_001901357.1 CDS Rpic_4997 NC_010683.1 50011 50346 D hypothetical protein 50011..50346 Ralstonia pickettii 12J 6289909 YP_001901358.1 CDS Rpic_4998 NC_010683.1 50545 50751 D KEGG: stt:t4236 hypothetical protein; hypothetical protein 50545..50751 Ralstonia pickettii 12J 6289910 YP_001901359.1 CDS Rpic_4999 NC_010683.1 50856 51203 R KEGG: reh:H16_B0943 hypothetical protein; hypothetical protein complement(50856..51203) Ralstonia pickettii 12J 6289911 YP_001901360.1 CDS Rpic_5000 NC_010683.1 51229 51495 R hypothetical protein complement(51229..51495) Ralstonia pickettii 12J 6289885 YP_001901361.1 CDS Rpic_5001 NC_010683.1 51519 51728 R KEGG: rso:RSc3357 hypothetical protein; hypothetical protein complement(51519..51728) Ralstonia pickettii 12J 6289886 YP_001901362.1 CDS Rpic_5002 NC_010683.1 51731 52303 R KEGG: ypp:YPDSF_4129 endonuclease; endonuclease complement(51731..52303) Ralstonia pickettii 12J 6289887 YP_001901363.1 CDS Rpic_5003 NC_010683.1 52300 52494 R hypothetical protein complement(52300..52494) Ralstonia pickettii 12J 6289888 YP_001901364.1 CDS Rpic_5004 NC_010683.1 52547 52795 R hypothetical protein complement(52547..52795) Ralstonia pickettii 12J 6289889 YP_001901365.1 CDS Rpic_5005 NC_010683.1 52792 54045 R PFAM: TraB family protein; KEGG: nha:Nham_4542 TraB; conjugal transfer protein TraB complement(52792..54045) Ralstonia pickettii 12J 6289890 YP_001901366.1 CDS Rpic_5006 NC_010683.1 54052 54462 R KEGG: bmu:Bmul_1938 lytic transglycosylase catalytic; lytic transglycosylase complement(54052..54462) Ralstonia pickettii 12J 6289891 YP_001901367.1 CDS Rpic_5007 NC_010683.1 54459 55802 R PFAM: conjugation TrbI family protein; KEGG: rme:Rmet_6299 conjugation TrbI-like protein; conjugation TrbI family protein complement(54459..55802) Ralstonia pickettii 12J 6289892 YP_001901368.1 CDS Rpic_5008 NC_010683.1 55802 56755 R PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pol:Bpro_5236 conjugal transfer protein TrbG/VirB9/CagX; conjugal transfer protein TrbG complement(55802..56755) Ralstonia pickettii 12J 6289893 YP_001901369.1 CDS Rpic_5009 NC_010683.1 56752 57480 R KEGG: rfr:Rfer_4254 type IV secretory pathway component VirB8-like; hypothetical protein complement(56752..57480) Ralstonia pickettii 12J 6289894 YP_001901370.1 CDS Rpic_5010 NC_010683.1 57480 58496 R PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: pol:Bpro_5231 TrbL/VirB6 plasmid conjugal transfer protein; TrbL/VirB6 plasmid conjugal transfer protein complement(57480..58496) Ralstonia pickettii 12J 6289895 YP_001901371.1 CDS Rpic_5011 NC_010683.1 58501 58833 R hypothetical protein complement(58501..58833) Ralstonia pickettii 12J 6289896 YP_001901372.1 CDS Rpic_5012 NC_010683.1 58869 59780 R KEGG: tbd:Tbd_1819 hypothetical protein; hypothetical protein complement(58869..59780) Ralstonia pickettii 12J 6289897 YP_001901373.1 CDS Rpic_5013 NC_010683.1 59773 62451 R KEGG: rme:Rmet_6305 type IV secretory pathway VirB4 components-like protein; Type IV secretory pathway VirB4 protein-like protein complement(59773..62451) Ralstonia pickettii 12J 6289949 YP_001901374.1 CDS Rpic_5014 NC_010683.1 62445 62801 R PFAM: type IV secretory pathway VirB3 family protein; KEGG: rfr:Rfer_4261 hypothetical protein; type IV secretory pathway VirB3 family protein complement(62445..62801) Ralstonia pickettii 12J 6289950 YP_001901375.1 CDS Rpic_5015 NC_010683.1 62807 63223 R hypothetical protein complement(62807..63223) Ralstonia pickettii 12J 6289951 YP_001901376.1 CDS Rpic_5016 NC_010683.1 63241 64272 R PFAM: type II secretion system protein E; KEGG: rme:Rmet_6302 type II secretion system protein E; type II secretion system protein E complement(63241..64272) Ralstonia pickettii 12J 6289952 YP_001901377.1 CDS Rpic_5017 NC_010683.1 64265 64816 R PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_1339 lytic transglycosylase, catalytic; lytic transglycosylase complement(64265..64816) Ralstonia pickettii 12J 6289953 YP_001901378.1 CDS Rpic_5018 NC_010683.1 64813 65166 R hypothetical protein complement(64813..65166) Ralstonia pickettii 12J 6289954 YP_001901379.1 CDS Rpic_5019 NC_010683.1 65187 65579 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rso:RSc0422 single-strand DNA-binding protein; single-strand binding protein complement(65187..65579) Ralstonia pickettii 12J 6289955 YP_001901380.1 CDS Rpic_5020 NC_010683.1 65616 65828 R hypothetical protein complement(65616..65828) Ralstonia pickettii 12J 6289956 YP_001901381.1 CDS Rpic_5021 NC_010683.1 65858 66091 R hypothetical protein complement(65858..66091) Ralstonia pickettii 12J 6289957 YP_001901382.1 CDS Rpic_5022 NC_010683.1 66249 67274 R PFAM: SCP-like extracellular; KEGG: bmu:Bmul_5562 SCP-like extracellular; hypothetical protein complement(66249..67274) Ralstonia pickettii 12J 6289958 YP_001901383.1 CDS Rpic_5023 NC_010683.1 67580 68185 R KEGG: bvi:Bcep1808_7070 hypothetical protein; hypothetical protein complement(67580..68185) Ralstonia pickettii 12J 6289959 YP_001901384.1 CDS Rpic_5024 NC_010683.1 68209 69447 R KEGG: pfl:PFL_4682 type IV prepilin PilV, putative; hypothetical protein complement(68209..69447) Ralstonia pickettii 12J 6289960 YP_001901385.1 CDS Rpic_5025 NC_010683.1 69459 69938 R KEGG: olu:OSTLU_29138 predicted protein; hypothetical protein complement(69459..69938) Ralstonia pickettii 12J 6289961 YP_001901386.1 CDS Rpic_5026 NC_010683.1 69970 70470 R KEGG: pol:Bpro_5245 type IV pilus biogenesis protein, putative; hypothetical protein complement(69970..70470) Ralstonia pickettii 12J 6289872 YP_001901387.1 CDS Rpic_5027 NC_010683.1 70505 71545 R PFAM: type II secretion system protein; KEGG: bte:BTH_II0773 type IV pilus biogenesis protein; type II secretion system protein complement(70505..71545) Ralstonia pickettii 12J 6289873 YP_001901388.1 CDS Rpic_5028 NC_010683.1 71542 73371 R PFAM: type II secretion system protein E; KEGG: gox:GOX2628 nucleotide binding protein PilQ; type II secretion system protein E complement(71542..73371) Ralstonia pickettii 12J 6289874 YP_001901389.1 CDS Rpic_5029 NC_010683.1 73371 74627 R KEGG: bam:Bamb_5879 PilO; putative type IV pilus biosynthesis protein; hypothetical protein complement(73371..74627) Ralstonia pickettii 12J 6289875 YP_001901390.1 CDS Rpic_5030 NC_010683.1 74630 75196 R KEGG: ago:AGOS_ADL190C ADL190Cp; hypothetical protein complement(74630..75196) Ralstonia pickettii 12J 6289876 YP_001901391.1 CDS Rpic_5031 NC_010683.1 75214 76899 R KEGG: gox:GOX2625 PilN; PilN complement(75214..76899) Ralstonia pickettii 12J 6289877 YP_001901392.1 CDS Rpic_5032 NC_010683.1 76896 77495 R KEGG: pol:Bpro_5453 hypothetical protein; hypothetical protein complement(76896..77495) Ralstonia pickettii 12J 6289878 YP_001901393.1 CDS Rpic_5033 NC_010683.1 77525 77962 R PFAM: Lytic transglycosylase catalytic; KEGG: bmu:Bmul_5550 lytic transglycosylase catalytic; lytic transglycosylase complement(77525..77962) Ralstonia pickettii 12J 6289879 YP_001901394.1 CDS Rpic_5034 NC_010683.1 77959 78861 R KEGG: rme:Rmet_6297 hypothetical protein; hypothetical protein complement(77959..78861) Ralstonia pickettii 12J 6289880 YP_001901395.1 CDS Rpic_5035 NC_010683.1 78972 79241 R hypothetical protein complement(78972..79241) Ralstonia pickettii 12J 6289881 YP_001901396.1 CDS Rpic_5036 NC_010683.1 79312 79725 D KEGG: psp:PSPPH_1393 repressor protein C2, putative; hypothetical protein 79312..79725 Ralstonia pickettii 12J 6289882 YP_001901397.1 CDS Rpic_5037 NC_010683.1 79897 80268 D KEGG: reu:Reut_A2380 peptidase S24, S26A and S26B; hypothetical protein 79897..80268 Ralstonia pickettii 12J 6289883 YP_001901398.1 CDS Rpic_5038 NC_010683.1 80594 80920 D hypothetical protein 80594..80920 Ralstonia pickettii 12J 6289884 Rpic_R0059 tRNA Rpic_R0059 NC_010678.1 65778 65862 R tRNA-Leu complement(65778..65862) Ralstonia pickettii 12J 6284908 Rpic_R0062 tRNA Rpic_R0062 NC_010678.1 818614 818689 R tRNA-Ala complement(818614..818689) Ralstonia pickettii 12J 6285919 Rpic_R0063 tRNA Rpic_R0063 NC_010678.1 818726 818802 R tRNA-Ile complement(818726..818802) Ralstonia pickettii 12J 6285922 Rpic_R0065 tRNA Rpic_R0065 NC_010678.1 905719 905795 D tRNA-OTHER 905719..905795 Ralstonia pickettii 12J 6284882 Rpic_R0001 tRNA Rpic_R0001 NC_010682.1 265135 265211 R tRNA-Gln complement(265135..265211) Ralstonia pickettii 12J 6289086 Rpic_R0002 tRNA Rpic_R0002 NC_010682.1 495138 495214 R tRNA-Met complement(495138..495214) Ralstonia pickettii 12J 6288975 Rpic_R0003 tRNA Rpic_R0003 NC_010682.1 692616 692689 R tRNA-Gly complement(692616..692689) Ralstonia pickettii 12J 6288041 Rpic_R0004 tRNA Rpic_R0004 NC_010682.1 726813 726888 D tRNA-Lys 726813..726888 Ralstonia pickettii 12J 6286563 Rpic_R0005 tRNA Rpic_R0005 NC_010682.1 765465 765540 R tRNA-Cys complement(765465..765540) Ralstonia pickettii 12J 6287595 Rpic_R0006 tRNA Rpic_R0006 NC_010682.1 869613 869687 R tRNA-Arg complement(869613..869687) Ralstonia pickettii 12J 6287499 Rpic_R0007 tRNA Rpic_R0007 NC_010682.1 991690 991765 D tRNA-Gly 991690..991765 Ralstonia pickettii 12J 6286268 Rpic_R0008 tRNA Rpic_R0008 NC_010682.1 991819 991894 D tRNA-Gly 991819..991894 Ralstonia pickettii 12J 6286269 Rpic_R0009 tRNA Rpic_R0009 NC_010682.1 991987 992060 D tRNA-Cys 991987..992060 Ralstonia pickettii 12J 6286356 Rpic_R0010 tRNA Rpic_R0010 NC_010682.1 1009474 1009549 R tRNA-Lys complement(1009474..1009549) Ralstonia pickettii 12J 6289354 Rpic_R0011 tRNA Rpic_R0011 NC_010682.1 1012632 1012722 R tRNA-Leu complement(1012632..1012722) Ralstonia pickettii 12J 6287006 Rpic_R0012 tRNA Rpic_R0012 NC_010682.1 1012802 1012877 R tRNA-Asn complement(1012802..1012877) Ralstonia pickettii 12J 6287007 Rpic_R0013 tRNA Rpic_R0013 NC_010682.1 1070884 1070977 D tRNA-Ser 1070884..1070977 Ralstonia pickettii 12J 6286825 Rpic_R0014 tRNA Rpic_R0014 NC_010682.1 1083008 1083083 D tRNA-Ala 1083008..1083083 Ralstonia pickettii 12J 6289457 Rpic_R0015 tRNA Rpic_R0015 NC_010682.1 1083203 1083278 D tRNA-Glu 1083203..1083278 Ralstonia pickettii 12J 6289458 Rpic_R0016 tRNA Rpic_R0016 NC_010682.1 1083343 1083419 D tRNA-Asp 1083343..1083419 Ralstonia pickettii 12J 6286701 Rpic_R0017 tRNA Rpic_R0017 NC_010682.1 1139441 1139525 R tRNA-Leu complement(1139441..1139525) Ralstonia pickettii 12J 6289438 Rpic_R0018 tRNA Rpic_R0018 NC_010682.1 1264661 1264736 R tRNA-His complement(1264661..1264736) Ralstonia pickettii 12J 6289611 Rpic_R0019 tRNA Rpic_R0019 NC_010682.1 1964884 1964960 R tRNA-Asp complement(1964884..1964960) Ralstonia pickettii 12J 6289324 Rpic_R0020 tRNA Rpic_R0020 NC_010682.1 1965005 1965080 R tRNA-Val complement(1965005..1965080) Ralstonia pickettii 12J 6289325 Rpic_R0021 tRNA Rpic_R0021 NC_010682.1 1991223 1991309 R tRNA-Leu complement(1991223..1991309) Ralstonia pickettii 12J 6288614 Rpic_R0022 tRNA Rpic_R0022 NC_010682.1 2036521 2036597 D tRNA-Met 2036521..2036597 Ralstonia pickettii 12J 6288140 Rpic_R0023 tRNA Rpic_R0023 NC_010682.1 2036626 2036702 D tRNA-Met 2036626..2036702 Ralstonia pickettii 12J 6288141 Rpic_R0024 tRNA Rpic_R0024 NC_010682.1 2078953 2079029 D tRNA-Pro 2078953..2079029 Ralstonia pickettii 12J 6288780 Rpic_R0025 tRNA Rpic_R0025 NC_010682.1 2087383 2087459 R tRNA-Val complement(2087383..2087459) Ralstonia pickettii 12J 6288557 Rpic_R0026 tRNA Rpic_R0026 NC_010682.1 2108340 2108416 D tRNA-Arg 2108340..2108416 Ralstonia pickettii 12J 6289374 Rpic_R0027 tRNA Rpic_R0027 NC_010682.1 2120813 2120889 D tRNA-Pro 2120813..2120889 Ralstonia pickettii 12J 6287882 Rpic_R0028 tRNA Rpic_R0028 NC_010682.1 2182657 2182731 R tRNA-Val complement(2182657..2182731) Ralstonia pickettii 12J 6288137 Rpic_R0029 tRNA Rpic_R0029 NC_010682.1 2203443 2203533 R tRNA-Ser complement(2203443..2203533) Ralstonia pickettii 12J 6289585 Rpic_R0030 tRNA Rpic_R0030 NC_010682.1 2324736 2324820 R tRNA-Leu complement(2324736..2324820) Ralstonia pickettii 12J 6287763 Rpic_R0031 tRNA Rpic_R0031 NC_010682.1 2387685 2387760 D tRNA-Thr 2387685..2387760 Ralstonia pickettii 12J 6287674 Rpic_R0032 tRNA Rpic_R0032 NC_010682.1 2393191 2393267 D tRNA-Arg 2393191..2393267 Ralstonia pickettii 12J 6289067 Rpic_R0033 tRNA Rpic_R0033 NC_010682.1 2403051 2403140 D tRNA-Ser 2403051..2403140 Ralstonia pickettii 12J 6288803 Rpic_R0034 tRNA Rpic_R0034 NC_010682.1 2428867 2428942 R tRNA-Asn complement(2428867..2428942) Ralstonia pickettii 12J 6288936 Rpic_R0035 tRNA Rpic_R0035 NC_010682.1 2428948 2429023 R tRNA-Met complement(2428948..2429023) Ralstonia pickettii 12J 6288937 Rpic_R0036 tRNA Rpic_R0036 NC_010682.1 2522143 2522230 R tRNA-Met complement(2522143..2522230) Ralstonia pickettii 12J 6286188 Rpic_R0037 tRNA Rpic_R0037 NC_010682.1 2656533 2656622 R tRNA-Ser complement(2656533..2656622) Ralstonia pickettii 12J 6289367 Rpic_R0039 tRNA Rpic_R0039 NC_010682.1 2806166 2806250 D tRNA-Leu 2806166..2806250 Ralstonia pickettii 12J 6287536 Rpic_R0040 tRNA Rpic_R0040 NC_010682.1 3202801 3202877 D tRNA-Pro 3202801..3202877 Ralstonia pickettii 12J 6286822 Rpic_R0043 tRNA Rpic_R0043 NC_010682.1 3261723 3261798 R tRNA-Ala complement(3261723..3261798) Ralstonia pickettii 12J 6287267 Rpic_R0044 tRNA Rpic_R0044 NC_010682.1 3261835 3261911 R tRNA-Ile complement(3261835..3261911) Ralstonia pickettii 12J 6287329 Rpic_R0046 tRNA Rpic_R0046 NC_010682.1 3351149 3351224 R tRNA-Thr complement(3351149..3351224) Ralstonia pickettii 12J 6286161 Rpic_R0047 tRNA Rpic_R0047 NC_010682.1 3468997 3469072 R tRNA-Trp complement(3468997..3469072) Ralstonia pickettii 12J 6289271 Rpic_R0048 tRNA Rpic_R0048 NC_010682.1 3470396 3470470 R tRNA-Thr complement(3470396..3470470) Ralstonia pickettii 12J 6289405 Rpic_R0049 tRNA Rpic_R0049 NC_010682.1 3470490 3470563 R tRNA-Gly complement(3470490..3470563) Ralstonia pickettii 12J 6289406 Rpic_R0050 tRNA Rpic_R0050 NC_010682.1 3470620 3470705 R tRNA-Tyr complement(3470620..3470705) Ralstonia pickettii 12J 6289407 Rpic_R0053 tRNA Rpic_R0053 NC_010682.1 3477029 3477104 R tRNA-Ala complement(3477029..3477104) Ralstonia pickettii 12J 6286742 Rpic_R0054 tRNA Rpic_R0054 NC_010682.1 3477141 3477217 R tRNA-Ile complement(3477141..3477217) Ralstonia pickettii 12J 6289290 Rpic_R0056 tRNA Rpic_R0056 NC_010682.1 3528979 3529054 D tRNA-Arg 3528979..3529054 Ralstonia pickettii 12J 6286632 Rpic_R0057 tRNA Rpic_R0057 NC_010682.1 3612361 3612436 R tRNA-Ala complement(3612361..3612436) Ralstonia pickettii 12J 6286846 Rpic_R0058 tRNA Rpic_R0058 NC_010682.1 3843868 3843943 R tRNA-Phe complement(3843868..3843943) Ralstonia pickettii 12J 6287668 Rpic_R0060 rRNA Rpic_R0060 NC_010678.1 815240 815352 R 5S ribosomal RNA complement(815240..815352) Ralstonia pickettii 12J 6285001 Rpic_R0061 rRNA Rpic_R0061 NC_010678.1 815531 818348 R 23S ribosomal RNA complement(815531..818348) Ralstonia pickettii 12J 6285917 Rpic_R0064 rRNA Rpic_R0064 NC_010678.1 818863 820393 R 16S ribosomal RNA complement(818863..820393) Ralstonia pickettii 12J 6285926 Rpic_R0041 rRNA Rpic_R0041 NC_010682.1 3258349 3258461 R 5S ribosomal RNA complement(3258349..3258461) Ralstonia pickettii 12J 6287265 Rpic_R0042 rRNA Rpic_R0042 NC_010682.1 3258640 3261457 R 23S ribosomal RNA complement(3258640..3261457) Ralstonia pickettii 12J 6287266 Rpic_R0045 rRNA Rpic_R0045 NC_010682.1 3261972 3263502 R 16S ribosomal RNA complement(3261972..3263502) Ralstonia pickettii 12J 6287330 Rpic_R0051 rRNA Rpic_R0051 NC_010682.1 3473655 3473767 R 5S ribosomal RNA complement(3473655..3473767) Ralstonia pickettii 12J 6286740 Rpic_R0052 rRNA Rpic_R0052 NC_010682.1 3473946 3476763 R 23S ribosomal RNA complement(3473946..3476763) Ralstonia pickettii 12J 6286741 Rpic_R0055 rRNA Rpic_R0055 NC_010682.1 3477278 3478808 R 16S ribosomal RNA complement(3477278..3478808) Ralstonia pickettii 12J 6289291