-- dump date 20240506_003021 -- class Genbank::Contig -- table contig_comment -- id comment NC_014664.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002292.1.REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: PhotoheterotrophREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: ProdigalREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas inREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65 CDSs (without protein) :: 65REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65 CDSs (without protein) :: 65 Pseudo Genes (ambiguous residues) :: 0 of 65REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65 CDSs (without protein) :: 65 Pseudo Genes (ambiguous residues) :: 0 of 65 Pseudo Genes (frameshifted) :: 28 of 65REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65 CDSs (without protein) :: 65 Pseudo Genes (ambiguous residues) :: 0 of 65 Pseudo Genes (frameshifted) :: 28 of 65 Pseudo Genes (incomplete) :: 46 of 65REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65 CDSs (without protein) :: 65 Pseudo Genes (ambiguous residues) :: 0 of 65 Pseudo Genes (frameshifted) :: 28 of 65 Pseudo Genes (incomplete) :: 46 of 65 Pseudo Genes (internal stop) :: 6 of 65REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65 CDSs (without protein) :: 65 Pseudo Genes (ambiguous residues) :: 0 of 65 Pseudo Genes (frameshifted) :: 28 of 65 Pseudo Genes (incomplete) :: 46 of 65 Pseudo Genes (internal stop) :: 6 of 65 Pseudo Genes (multiple problems) :: 14 of 65REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65 CDSs (without protein) :: 65 Pseudo Genes (ambiguous residues) :: 0 of 65 Pseudo Genes (frameshifted) :: 28 of 65 Pseudo Genes (incomplete) :: 46 of 65 Pseudo Genes (internal stop) :: 6 of 65 Pseudo Genes (multiple problems) :: 14 of 65 CRISPR Arrays :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65 CDSs (without protein) :: 65 Pseudo Genes (ambiguous residues) :: 0 of 65 Pseudo Genes (frameshifted) :: 28 of 65 Pseudo Genes (incomplete) :: 46 of 65 Pseudo Genes (internal stop) :: 6 of 65 Pseudo Genes (multiple problems) :: 14 of 65 CRISPR Arrays :: 4 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002292.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085652 Source DNA available from Yves V. Brun (Ybrun@indiana.edu) Organism available from ATCC: ATCC 17100 Contacts: Yves V. Brun (Ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Rhodomicrobium vannielii ATCC 17100 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 1 ref_biomaterial :: ATCC 17100, NCIMB 10020 biotic_relationship :: Free living trophic_level :: Photoheterotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02056 Type Strain :: Yes Greengenes ID :: 4645 Funding Program :: DOE-CSP 2008 Gene Calling Method :: Prodigal Isolation Comments :: isolated by C B van Niel -- H C Douglas in 1949 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 04/30/2023 01:19:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,712 CDSs (total) :: 3,654 Genes (coding) :: 3,589 CDSs (with protein) :: 3,589 Genes (RNA) :: 58 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 65 CDSs (without protein) :: 65 Pseudo Genes (ambiguous residues) :: 0 of 65 Pseudo Genes (frameshifted) :: 28 of 65 Pseudo Genes (incomplete) :: 46 of 65 Pseudo Genes (internal stop) :: 6 of 65 Pseudo Genes (multiple problems) :: 14 of 65 CRISPR Arrays :: 4 ##Genome-Annotation-Data-END## COMPLETENESS: full length.