-- dump date 20140620_032536 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_567142.1 91974483 4020455 649..2067 1 NC_007958.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 2067 dnaA 4020455 dnaA Rhodopseudomonas palustris BisB5 chromosomal replication initiation protein YP_567142.1 649 D 316057 CDS YP_567143.1 91974484 4020456 2329..3447 1 NC_007958.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3447 4020456 RPD_0002 Rhodopseudomonas palustris BisB5 DNA polymerase III subunit beta YP_567143.1 2329 D 316057 CDS YP_567144.1 91974485 4020457 3622..4758 1 NC_007958.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4758 recF 4020457 recF Rhodopseudomonas palustris BisB5 recombination protein F YP_567144.1 3622 D 316057 CDS YP_567145.1 91974486 4020458 4985..7426 1 NC_007958.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 7426 gyrB 4020458 gyrB Rhodopseudomonas palustris BisB5 DNA gyrase subunit B YP_567145.1 4985 D 316057 CDS YP_567146.1 91974487 4020459 complement(7691..8461) 1 NC_007958.1 hypothetical protein 8461 4020459 RPD_0005 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567146.1 7691 R 316057 CDS YP_567147.1 91974488 4020460 complement(8475..8738) 1 NC_007958.1 hypothetical protein 8738 4020460 RPD_0006 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567147.1 8475 R 316057 CDS YP_567148.1 91974489 4020461 complement(8751..9092) 1 NC_007958.1 hypothetical protein 9092 4020461 RPD_0007 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567148.1 8751 R 316057 CDS YP_567149.1 91974490 4020462 complement(9267..10505) 1 NC_007958.1 hypothetical protein 10505 4020462 RPD_0008 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567149.1 9267 R 316057 CDS YP_567150.1 91974491 4020463 10961..11476 1 NC_007958.1 hypothetical protein 11476 4020463 RPD_0009 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567150.1 10961 D 316057 CDS YP_567151.1 91974492 4020464 11481..12173 1 NC_007958.1 hypothetical protein 12173 4020464 RPD_0010 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567151.1 11481 D 316057 CDS YP_567152.1 91974493 4020465 complement(12201..13025) 1 NC_007958.1 hypothetical protein 13025 4020465 RPD_0011 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567152.1 12201 R 316057 CDS YP_567153.1 91974494 4020466 complement(13025..15799) 1 NC_007958.1 helicase-like protein 15799 4020466 RPD_0012 Rhodopseudomonas palustris BisB5 helicase-like protein YP_567153.1 13025 R 316057 CDS YP_567154.1 91974495 4020467 complement(15807..18746) 1 NC_007958.1 DNA methylase containing a Zn-ribbon 18746 4020467 RPD_0013 Rhodopseudomonas palustris BisB5 DNA methylase containing a Zn-ribbon YP_567154.1 15807 R 316057 CDS YP_567155.1 91974496 4020468 complement(18758..19339) 1 NC_007958.1 hypothetical protein 19339 4020468 RPD_0014 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567155.1 18758 R 316057 CDS YP_567156.1 91974497 4020469 complement(19336..22488) 1 NC_007958.1 hypothetical protein 22488 4020469 RPD_0015 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567156.1 19336 R 316057 CDS YP_567157.1 91974498 4020470 complement(22544..22762) 1 NC_007958.1 hypothetical protein 22762 4020470 RPD_0016 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567157.1 22544 R 316057 CDS YP_567158.1 91974499 4020471 23030..23581 1 NC_007958.1 hypothetical protein 23581 4020471 RPD_0017 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567158.1 23030 D 316057 CDS YP_567159.1 91974500 4020472 23793..24572 1 NC_007958.1 metallophosphoesterase 24572 4020472 RPD_0018 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_567159.1 23793 D 316057 CDS YP_567160.1 91974501 4020473 24633..25244 1 NC_007958.1 hypothetical protein 25244 4020473 RPD_0019 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567160.1 24633 D 316057 CDS YP_567161.1 91974502 4020474 25241..27334 1 NC_007958.1 AAA ATPase, central region 27334 4020474 RPD_0020 Rhodopseudomonas palustris BisB5 AAA ATPase, central region YP_567161.1 25241 D 316057 CDS YP_567162.1 91974503 4020475 27411..27716 1 NC_007958.1 hypothetical protein 27716 4020475 RPD_0021 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567162.1 27411 D 316057 CDS YP_567163.1 91974504 4020476 27805..28395 1 NC_007958.1 hypothetical protein 28395 4020476 RPD_0022 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567163.1 27805 D 316057 CDS YP_567164.1 91974505 4020477 28823..29248 1 NC_007958.1 hypothetical protein 29248 4020477 RPD_0023 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567164.1 28823 D 316057 CDS YP_567165.1 91974506 4020478 29308..29997 1 NC_007958.1 hypothetical protein 29997 4020478 RPD_0024 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567165.1 29308 D 316057 CDS YP_567166.1 91974507 4020479 29997..32429 1 NC_007958.1 integrase catalytic subunit 32429 4020479 RPD_0025 Rhodopseudomonas palustris BisB5 integrase catalytic subunit YP_567166.1 29997 D 316057 CDS YP_567167.1 91974508 4020480 32426..33565 1 NC_007958.1 hypothetical protein 33565 4020480 RPD_0026 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567167.1 32426 D 316057 CDS YP_567168.1 91974509 4020481 33552..35345 1 NC_007958.1 hypothetical protein 35345 4020481 RPD_0027 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567168.1 33552 D 316057 CDS YP_567169.1 91974510 4020482 35342..37240 1 NC_007958.1 hypothetical protein 37240 4020482 RPD_0028 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567169.1 35342 D 316057 CDS YP_567170.1 91974511 4020483 37353..37691 1 NC_007958.1 hypothetical protein 37691 4020483 RPD_0029 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567170.1 37353 D 316057 CDS YP_567171.1 91974512 4020484 complement(37697..38431) 1 NC_007958.1 hypothetical protein 38431 4020484 RPD_0030 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567171.1 37697 R 316057 CDS YP_567172.1 91974513 4020485 complement(38412..38798) 1 NC_007958.1 hypothetical protein 38798 4020485 RPD_0031 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567172.1 38412 R 316057 CDS YP_567173.1 91974514 4020486 38941..39660 1 NC_007958.1 hypothetical protein 39660 4020486 RPD_0032 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567173.1 38941 D 316057 CDS YP_567174.1 91974515 4020487 39653..40090 1 NC_007958.1 hypothetical protein 40090 4020487 RPD_0033 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567174.1 39653 D 316057 CDS YP_567175.1 91974516 4020488 40087..40557 1 NC_007958.1 hypothetical protein 40557 4020488 RPD_0034 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567175.1 40087 D 316057 CDS YP_567176.1 91974517 4020489 40554..41921 1 NC_007958.1 UBA/THIF-type NAD/FAD binding domain-containing protein 41921 4020489 RPD_0035 Rhodopseudomonas palustris BisB5 UBA/THIF-type NAD/FAD binding domain-containing protein YP_567176.1 40554 D 316057 CDS YP_567177.1 91974518 4020490 42301..44961 1 NC_007958.1 hypothetical protein 44961 4020490 RPD_0036 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567177.1 42301 D 316057 CDS YP_567178.1 91974519 4020491 44958..48305 1 NC_007958.1 UvrD/REP helicase 48305 4020491 RPD_0037 Rhodopseudomonas palustris BisB5 UvrD/REP helicase YP_567178.1 44958 D 316057 CDS YP_567179.1 91974520 4020492 48319..49446 1 NC_007958.1 hypothetical protein 49446 4020492 RPD_0038 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567179.1 48319 D 316057 CDS YP_567180.1 91974521 4020493 complement(49431..49802) 1 NC_007958.1 hypothetical protein 49802 4020493 RPD_0039 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567180.1 49431 R 316057 CDS YP_567181.1 91974522 4020494 complement(50548..51813) 1 NC_007958.1 thiolase 51813 4020494 RPD_0040 Rhodopseudomonas palustris BisB5 thiolase YP_567181.1 50548 R 316057 CDS YP_567182.1 91974523 4020495 complement(51851..53074) 1 NC_007958.1 cytochrome P450 53074 4020495 RPD_0041 Rhodopseudomonas palustris BisB5 cytochrome P450 YP_567182.1 51851 R 316057 CDS YP_567183.1 91974524 4020496 complement(53163..55085) 1 NC_007958.1 AMP-dependent synthetase and ligase 55085 4020496 RPD_0042 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_567183.1 53163 R 316057 CDS YP_567184.1 91974525 4020497 55237..55872 1 NC_007958.1 regulatory protein TetR 55872 4020497 RPD_0043 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_567184.1 55237 D 316057 CDS YP_567185.1 91974526 4020498 complement(56111..56848) 1 NC_007958.1 pentapeptide repeat-containing protein 56848 4020498 RPD_0044 Rhodopseudomonas palustris BisB5 pentapeptide repeat-containing protein YP_567185.1 56111 R 316057 CDS YP_567186.1 91974527 4020499 complement(57042..57812) 1 NC_007958.1 enoyl-CoA hydratase/isomerase 57812 4020499 RPD_0045 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_567186.1 57042 R 316057 CDS YP_567187.1 91974528 4020500 complement(57862..58605) 1 NC_007958.1 regulatory protein GntR 58605 4020500 RPD_0046 Rhodopseudomonas palustris BisB5 regulatory protein GntR YP_567187.1 57862 R 316057 CDS YP_567188.1 91974529 4020501 complement(58602..60155) 1 NC_007958.1 AMP-dependent synthetase and ligase 60155 4020501 RPD_0047 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_567188.1 58602 R 316057 CDS YP_567189.1 91974530 4020502 complement(60305..61537) 1 NC_007958.1 ABC-type branched-chain amino acid transport systems periplasmic component-like 61537 4020502 RPD_0048 Rhodopseudomonas palustris BisB5 ABC-type branched-chain amino acid transport systems periplasmic component-like YP_567189.1 60305 R 316057 CDS YP_567190.1 91974531 4020503 complement(61605..63122) 1 NC_007958.1 betaine-aldehyde dehydrogenase 63122 4020503 RPD_0049 Rhodopseudomonas palustris BisB5 betaine-aldehyde dehydrogenase YP_567190.1 61605 R 316057 CDS YP_567191.1 91974532 4020504 complement(63145..63843) 1 NC_007958.1 ABC transporter-like protein 63843 4020504 RPD_0050 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567191.1 63145 R 316057 CDS YP_567192.1 91974533 4020505 complement(63836..64612) 1 NC_007958.1 ABC transporter-like protein 64612 4020505 RPD_0051 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567192.1 63836 R 316057 CDS YP_567193.1 91974534 4020506 complement(64609..65649) 1 NC_007958.1 inner-membrane translocator 65649 4020506 RPD_0052 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_567193.1 64609 R 316057 CDS YP_567194.1 91974535 4020507 complement(65655..66530) 1 NC_007958.1 inner-membrane translocator 66530 4020507 RPD_0053 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_567194.1 65655 R 316057 CDS YP_567195.1 91974536 4020508 complement(66611..67423) 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 67423 4020508 RPD_0054 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_567195.1 66611 R 316057 CDS YP_567196.1 91974537 4020509 complement(67486..67848) 1 NC_007958.1 hypothetical protein 67848 4020509 RPD_0055 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567196.1 67486 R 316057 CDS YP_567197.1 91974538 4020510 68026..69015 1 NC_007958.1 integral membrane protein TerC 69015 4020510 RPD_0056 Rhodopseudomonas palustris BisB5 integral membrane protein TerC YP_567197.1 68026 D 316057 CDS YP_567198.1 91974539 4020511 69012..69314 1 NC_007958.1 hypothetical protein 69314 4020511 RPD_0057 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567198.1 69012 D 316057 CDS YP_567199.1 91974540 4020512 69369..69836 1 NC_007958.1 tellurite resistance protein-like 69836 4020512 RPD_0058 Rhodopseudomonas palustris BisB5 tellurite resistance protein-like YP_567199.1 69369 D 316057 CDS YP_567200.1 91974541 4020513 70113..70730 1 NC_007958.1 hypothetical protein 70730 4020513 RPD_0059 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567200.1 70113 D 316057 CDS YP_567201.1 91974542 4020514 70717..71097 1 NC_007958.1 regulatory protein ArsR 71097 4020514 RPD_0060 Rhodopseudomonas palustris BisB5 regulatory protein ArsR YP_567201.1 70717 D 316057 CDS YP_567202.1 91974543 4020515 71131..71868 1 NC_007958.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 71868 4020515 RPD_0061 Rhodopseudomonas palustris BisB5 undecaprenyl pyrophosphate synthase YP_567202.1 71131 D 316057 CDS YP_567203.1 91974544 4020516 71985..73535 1 NC_007958.1 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 73535 4020516 RPD_0062 Rhodopseudomonas palustris BisB5 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase YP_567203.1 71985 D 316057 CDS YP_567204.1 91974545 4020517 73673..74686 1 NC_007958.1 hypothetical protein 74686 4020517 RPD_0063 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567204.1 73673 D 316057 CDS YP_567205.1 91974546 4020518 complement(75240..76196) 1 NC_007958.1 helix-turn-helix, AraC type 76196 4020518 RPD_0064 Rhodopseudomonas palustris BisB5 helix-turn-helix, AraC type YP_567205.1 75240 R 316057 CDS YP_567206.1 91974547 4020519 76970..79036 1 NC_007958.1 chemotaxis sensory transducer 79036 4020519 RPD_0065 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_567206.1 76970 D 316057 CDS YP_567207.1 91974548 4020520 79164..81395 1 NC_007958.1 GGDEF domain-containing protein 81395 4020520 RPD_0066 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_567207.1 79164 D 316057 CDS YP_567208.1 91974549 4020522 complement(82163..83650) 1 NC_007958.1 ATPase-like ATP-binding protein 83650 4020522 RPD_0067 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_567208.1 82163 R 316057 CDS YP_567209.1 91974550 4020523 83786..84514 1 NC_007958.1 ribonuclease P protein component 84514 4020523 RPD_0068 Rhodopseudomonas palustris BisB5 ribonuclease P protein component YP_567209.1 83786 D 316057 CDS YP_567210.1 91974551 4020524 84531..86396 1 NC_007958.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 86396 4020524 RPD_0069 Rhodopseudomonas palustris BisB5 putative inner membrane protein translocase component YidC YP_567210.1 84531 D 316057 CDS YP_567211.1 91974552 4020525 86689..87342 1 NC_007958.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 87342 engB 4020525 engB Rhodopseudomonas palustris BisB5 ribosome biogenesis GTP-binding protein YsxC YP_567211.1 86689 D 316057 CDS YP_567212.1 91974553 4020526 87339..87707 1 NC_007958.1 hypothetical protein 87707 4020526 RPD_0071 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567212.1 87339 D 316057 CDS YP_567213.2 228924660 4020527 87920..88816 1 NC_007958.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 88816 4020527 RPD_0072 Rhodopseudomonas palustris BisB5 acetylglutamate kinase YP_567213.2 87920 D 316057 CDS YP_567214.1 91974555 4020528 88816..89970 1 NC_007958.1 peptidoglycan binding domain-containing protein 89970 4020528 RPD_0073 Rhodopseudomonas palustris BisB5 peptidoglycan binding domain-containing protein YP_567214.1 88816 D 316057 CDS YP_567215.1 91974556 4020529 89967..90668 1 NC_007958.1 pyrimidine 5-nucleotidase 90668 4020529 RPD_0074 Rhodopseudomonas palustris BisB5 pyrimidine 5-nucleotidase YP_567215.1 89967 D 316057 CDS YP_567216.1 91974557 4020530 90762..91607 1 NC_007958.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 91607 dapD 4020530 dapD Rhodopseudomonas palustris BisB5 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_567216.1 90762 D 316057 CDS YP_567217.1 91974558 4020531 91810..92097 1 NC_007958.1 hypothetical protein 92097 4020531 RPD_0076 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567217.1 91810 D 316057 CDS YP_567218.1 91974559 4020532 92115..93281 1 NC_007958.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 93281 4020532 RPD_0077 Rhodopseudomonas palustris BisB5 succinyl-diaminopimelate desuccinylase YP_567218.1 92115 D 316057 CDS YP_567219.1 91974560 4020533 complement(93536..94498) 1 NC_007958.1 transposase, IS4 94498 4020533 RPD_0078 Rhodopseudomonas palustris BisB5 transposase, IS4 YP_567219.1 93536 R 316057 CDS YP_567220.1 91974561 4020534 complement(94698..95435) 1 NC_007958.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 95435 truA 4020534 truA Rhodopseudomonas palustris BisB5 tRNA pseudouridine synthase A YP_567220.1 94698 R 316057 CDS YP_567221.1 91974562 4020535 complement(95609..96541) 1 NC_007958.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 96541 fmt 4020535 fmt Rhodopseudomonas palustris BisB5 methionyl-tRNA formyltransferase YP_567221.1 95609 R 316057 CDS YP_567222.1 91974563 4020536 complement(96621..97148) 1 NC_007958.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 97148 def 4020536 def Rhodopseudomonas palustris BisB5 peptide deformylase YP_567222.1 96621 R 316057 CDS YP_567223.1 91974564 4020537 97298..98515 1 NC_007958.1 hypothetical protein 98515 4020537 RPD_0082 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567223.1 97298 D 316057 CDS YP_567224.1 91974565 4020538 98724..100097 1 NC_007958.1 major facilitator transporter 100097 4020538 RPD_0083 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_567224.1 98724 D 316057 CDS YP_567225.1 91974566 4020539 complement(100126..100554) 1 NC_007958.1 hypothetical protein 100554 4020539 RPD_0084 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567225.1 100126 R 316057 CDS YP_567226.1 91974567 4020540 complement(100574..101179) 1 NC_007958.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 101179 recR 4020540 recR Rhodopseudomonas palustris BisB5 recombination protein RecR YP_567226.1 100574 R 316057 CDS YP_567227.1 91974568 4020541 complement(101293..101613) 1 NC_007958.1 hypothetical protein 101613 4020541 RPD_0086 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567227.1 101293 R 316057 CDS YP_567228.1 91974569 4020542 complement(101648..103522) 1 NC_007958.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 103522 4020542 RPD_0087 Rhodopseudomonas palustris BisB5 DNA polymerase III subunits gamma and tau YP_567228.1 101648 R 316057 CDS YP_567229.1 91974570 4020544 103996..104481 1 NC_007958.1 histidine triad (HIT) protein 104481 4020544 RPD_0088 Rhodopseudomonas palustris BisB5 histidine triad (HIT) protein YP_567229.1 103996 D 316057 CDS YP_567230.1 91974571 4020545 104486..105418 1 NC_007958.1 NUDIX hydrolase 105418 4020545 RPD_0089 Rhodopseudomonas palustris BisB5 NUDIX hydrolase YP_567230.1 104486 D 316057 CDS YP_567231.1 91974572 4020546 105415..106344 1 NC_007958.1 PfkB 106344 4020546 RPD_0090 Rhodopseudomonas palustris BisB5 PfkB YP_567231.1 105415 D 316057 CDS YP_567232.1 91974573 4020547 complement(106399..107100) 1 NC_007958.1 hypothetical protein 107100 4020547 RPD_0091 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567232.1 106399 R 316057 CDS YP_567233.1 91974574 4020548 complement(107176..107604) 1 NC_007958.1 hypothetical protein 107604 4020548 RPD_0092 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567233.1 107176 R 316057 CDS YP_567234.1 91974575 4020549 complement(107613..108380) 1 NC_007958.1 hydroxyacylglutathione hydrolase 108380 4020549 RPD_0093 Rhodopseudomonas palustris BisB5 hydroxyacylglutathione hydrolase YP_567234.1 107613 R 316057 CDS YP_567235.1 91974576 4020550 108557..109321 1 NC_007958.1 type 11 methyltransferase 109321 4020550 RPD_0094 Rhodopseudomonas palustris BisB5 type 11 methyltransferase YP_567235.1 108557 D 316057 CDS YP_567236.1 91974577 4020551 complement(109382..110107) 1 NC_007958.1 hypothetical protein 110107 4020551 RPD_0095 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567236.1 109382 R 316057 CDS YP_567237.1 91974578 4020552 complement(110600..111478) 1 NC_007958.1 HemK family modification methylase 111478 4020552 RPD_0096 Rhodopseudomonas palustris BisB5 HemK family modification methylase YP_567237.1 110600 R 316057 CDS YP_567238.1 91974579 4020553 complement(111521..112606) 1 NC_007958.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 112606 prfA 4020553 prfA Rhodopseudomonas palustris BisB5 peptide chain release factor 1 YP_567238.1 111521 R 316057 CDS YP_567239.1 91974580 4020554 complement(112658..114925) 1 NC_007958.1 PTSINtr with GAF domain, PtsP 114925 4020554 RPD_0098 Rhodopseudomonas palustris BisB5 PTSINtr with GAF domain, PtsP YP_567239.1 112658 R 316057 CDS YP_567240.1 91974581 4020555 complement(115231..116484) 1 NC_007958.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 116484 4020555 RPD_0099 Rhodopseudomonas palustris BisB5 aspartate kinase YP_567240.1 115231 R 316057 CDS YP_567241.1 91974582 4020556 116843..117604 1 NC_007958.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 117604 4020556 RPD_0100 Rhodopseudomonas palustris BisB5 3-demethylubiquinone-9 3-methyltransferase YP_567241.1 116843 D 316057 CDS YP_567242.1 91974583 4020557 complement(117713..118528) 1 NC_007958.1 hypothetical protein 118528 4020557 RPD_0101 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567242.1 117713 R 316057 CDS YP_567243.1 91974584 4020558 118681..119580 1 NC_007958.1 hypothetical protein 119580 4020558 RPD_0102 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567243.1 118681 D 316057 CDS YP_567244.1 91974585 4020559 complement(119581..120015) 1 NC_007958.1 hypothetical protein 120015 4020559 RPD_0103 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567244.1 119581 R 316057 CDS YP_567245.1 91974586 4020560 complement(120224..120727) 1 NC_007958.1 hypothetical protein 120727 4020560 RPD_0104 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567245.1 120224 R 316057 CDS YP_567246.1 91974587 4020561 complement(120724..121599) 1 NC_007958.1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 121599 4020561 RPD_0105 Rhodopseudomonas palustris BisB5 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_567246.1 120724 R 316057 CDS YP_567247.1 91974588 4020562 complement(121596..121886) 1 NC_007958.1 glutaredoxin GrxC 121886 4020562 RPD_0106 Rhodopseudomonas palustris BisB5 glutaredoxin GrxC YP_567247.1 121596 R 316057 CDS YP_567248.1 91974589 4020563 complement(121938..122756) 1 NC_007958.1 phosphoribosyltransferase 122756 4020563 RPD_0107 Rhodopseudomonas palustris BisB5 phosphoribosyltransferase YP_567248.1 121938 R 316057 CDS YP_567249.1 91974590 4020564 122868..123170 1 NC_007958.1 hypothetical protein 123170 4020564 RPD_0108 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567249.1 122868 D 316057 CDS YP_567250.1 91974591 4020565 123232..124065 1 NC_007958.1 type 11 methyltransferase 124065 4020565 RPD_0109 Rhodopseudomonas palustris BisB5 type 11 methyltransferase YP_567250.1 123232 D 316057 CDS YP_567251.1 91974592 4020566 complement(124127..124528) 1 NC_007958.1 NUDIX hydrolase 124528 4020566 RPD_0110 Rhodopseudomonas palustris BisB5 NUDIX hydrolase YP_567251.1 124127 R 316057 CDS YP_567252.1 91974593 4020567 complement(124701..125942) 1 NC_007958.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 125942 argJ 4020567 argJ Rhodopseudomonas palustris BisB5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein YP_567252.1 124701 R 316057 CDS YP_567253.1 91974594 4020568 complement(126213..126722) 1 NC_007958.1 OsmC-like protein 126722 4020568 RPD_0112 Rhodopseudomonas palustris BisB5 OsmC-like protein YP_567253.1 126213 R 316057 CDS YP_567254.1 91974595 4020569 complement(126781..127566) 1 NC_007958.1 ABC transporter-like protein 127566 4020569 RPD_0113 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567254.1 126781 R 316057 CDS YP_567255.1 91974596 4020570 complement(127566..128426) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 128426 4020570 RPD_0114 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_567255.1 127566 R 316057 CDS YP_567256.1 91974597 4020571 complement(128620..129606) 1 NC_007958.1 ABC transporter substrate-binding protein, aliphatic sulfonates 129606 4020571 RPD_0115 Rhodopseudomonas palustris BisB5 ABC transporter substrate-binding protein, aliphatic sulfonates YP_567256.1 128620 R 316057 CDS YP_567257.1 91974598 4020572 129849..132650 1 NC_007958.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 132650 4020572 RPD_0116 Rhodopseudomonas palustris BisB5 PII uridylyl-transferase YP_567257.1 129849 D 316057 CDS YP_567258.1 91974599 4020573 132778..133347 1 NC_007958.1 putative threonine efflux protein-like 133347 4020573 RPD_0117 Rhodopseudomonas palustris BisB5 putative threonine efflux protein-like YP_567258.1 132778 D 316057 CDS YP_567259.1 91974600 4020574 complement(133645..135261) 1 NC_007958.1 HWE histidine kinase 135261 4020574 RPD_0118 Rhodopseudomonas palustris BisB5 HWE histidine kinase YP_567259.1 133645 R 316057 CDS YP_567260.1 91974601 4020575 complement(135398..138127) 1 NC_007958.1 sensor histidine kinase with PAS/PAC 138127 4020575 RPD_0119 Rhodopseudomonas palustris BisB5 sensor histidine kinase with PAS/PAC YP_567260.1 135398 R 316057 CDS YP_567261.1 91974602 4020576 complement(138274..138702) 1 NC_007958.1 hypothetical protein 138702 4020576 RPD_0120 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567261.1 138274 R 316057 CDS YP_567262.1 91974603 4020577 138971..140191 1 NC_007958.1 extracellular ligand-binding receptor 140191 4020577 RPD_0121 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_567262.1 138971 D 316057 CDS YP_567263.1 91974604 4020578 140396..140815 1 NC_007958.1 hypothetical protein 140815 4020578 RPD_0122 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567263.1 140396 D 316057 CDS YP_567264.1 91974605 4020579 complement(140960..141211) 1 NC_007958.1 hypothetical protein 141211 4020579 RPD_0123 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567264.1 140960 R 316057 CDS YP_567265.1 91974606 4020580 141403..143565 1 NC_007958.1 penicillin-binding protein 1A 143565 4020580 RPD_0124 Rhodopseudomonas palustris BisB5 penicillin-binding protein 1A YP_567265.1 141403 D 316057 CDS YP_567266.1 91974607 4020581 complement(143897..144667) 1 NC_007958.1 hypothetical protein 144667 4020581 RPD_0125 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567266.1 143897 R 316057 CDS YP_567267.1 91974608 4020582 complement(144990..146315) 1 NC_007958.1 polyhydroxyalkanoate depolymerase, intracellular 146315 4020582 RPD_0126 Rhodopseudomonas palustris BisB5 polyhydroxyalkanoate depolymerase, intracellular YP_567267.1 144990 R 316057 CDS YP_567268.1 91974609 4020583 146905..147660 1 NC_007958.1 type 12 methyltransferase 147660 4020583 RPD_0127 Rhodopseudomonas palustris BisB5 type 12 methyltransferase YP_567268.1 146905 D 316057 CDS YP_567269.1 91974610 4020584 complement(147710..148540) 1 NC_007958.1 hypothetical protein 148540 4020584 RPD_0128 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567269.1 147710 R 316057 CDS YP_567270.1 91974611 4020585 complement(148537..149331) 1 NC_007958.1 ABC transporter-like protein 149331 4020585 RPD_0129 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567270.1 148537 R 316057 CDS YP_567271.1 91974612 4020586 149441..150763 1 NC_007958.1 periplasmic sensor signal transduction histidine kinase 150763 4020586 RPD_0130 Rhodopseudomonas palustris BisB5 periplasmic sensor signal transduction histidine kinase YP_567271.1 149441 D 316057 CDS YP_567272.1 91974613 4020587 150866..151420 1 NC_007958.1 response regulator receiver 151420 4020587 RPD_0131 Rhodopseudomonas palustris BisB5 response regulator receiver YP_567272.1 150866 D 316057 CDS YP_567273.1 91974614 4020588 complement(151611..152090) 1 NC_007958.1 hypothetical protein 152090 4020588 RPD_0132 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567273.1 151611 R 316057 CDS YP_567274.1 91974615 4020589 152241..153359 1 NC_007958.1 von Willebrand factor, type A 153359 4020589 RPD_0133 Rhodopseudomonas palustris BisB5 von Willebrand factor, type A YP_567274.1 152241 D 316057 CDS YP_567275.1 91974616 4020590 153579..154247 1 NC_007958.1 beta-lactamase-like protein 154247 4020590 RPD_0134 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_567275.1 153579 D 316057 CDS YP_567276.1 91974617 4020591 154717..155706 1 NC_007958.1 helix-turn-helix, AraC type 155706 4020591 RPD_0135 Rhodopseudomonas palustris BisB5 helix-turn-helix, AraC type YP_567276.1 154717 D 316057 CDS YP_567277.1 91974618 4020592 complement(155814..156233) 1 NC_007958.1 hypothetical protein 156233 4020592 RPD_0136 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567277.1 155814 R 316057 CDS YP_567278.1 91974619 4020593 complement(156463..157641) 1 NC_007958.1 esterase, PHB depolymerase 157641 4020593 RPD_0137 Rhodopseudomonas palustris BisB5 esterase, PHB depolymerase YP_567278.1 156463 R 316057 CDS YP_567279.1 91974620 4020594 complement(157856..158101) 1 NC_007958.1 hypothetical protein 158101 4020594 RPD_0138 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567279.1 157856 R 316057 CDS YP_567280.1 91974621 4020595 complement(158217..159605) 1 NC_007958.1 chromate transporter 159605 4020595 RPD_0139 Rhodopseudomonas palustris BisB5 chromate transporter YP_567280.1 158217 R 316057 CDS YP_567281.1 91974622 4020596 complement(159602..160213) 1 NC_007958.1 hypothetical protein 160213 4020596 RPD_0140 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567281.1 159602 R 316057 CDS YP_567282.1 91974623 4020597 complement(160419..160742) 1 NC_007958.1 hypothetical protein 160742 4020597 RPD_0141 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567282.1 160419 R 316057 CDS YP_567283.1 91974624 4020598 160993..161466 1 NC_007958.1 hypothetical protein 161466 4020598 RPD_0142 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567283.1 160993 D 316057 CDS YP_567284.1 91974625 4020599 161499..161972 1 NC_007958.1 hypothetical protein 161972 4020599 RPD_0143 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567284.1 161499 D 316057 CDS YP_567285.1 91974626 4020600 161969..162517 1 NC_007958.1 hypothetical protein 162517 4020600 RPD_0144 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567285.1 161969 D 316057 CDS YP_567286.1 91974627 4020601 complement(162595..163710) 1 NC_007958.1 hypothetical protein 163710 4020601 RPD_0145 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567286.1 162595 R 316057 CDS YP_567287.1 91974628 4020602 163879..165252 1 NC_007958.1 MmgE/PrpD 165252 4020602 RPD_0146 Rhodopseudomonas palustris BisB5 MmgE/PrpD YP_567287.1 163879 D 316057 CDS YP_567288.1 91974629 4020603 165321..165929 1 NC_007958.1 hypothetical protein 165929 4020603 RPD_0147 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567288.1 165321 D 316057 CDS YP_567289.1 91974630 4020604 166201..167619 1 NC_007958.1 malonyl-CoA decarboxylase 167619 4020604 RPD_0148 Rhodopseudomonas palustris BisB5 malonyl-CoA decarboxylase YP_567289.1 166201 D 316057 CDS YP_567290.1 91974631 4020605 167670..168587 1 NC_007958.1 Pirin-like protein 168587 4020605 RPD_0149 Rhodopseudomonas palustris BisB5 Pirin-like protein YP_567290.1 167670 D 316057 CDS YP_567291.1 91974632 4020606 168656..169573 1 NC_007958.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 169573 4020606 RPD_0150 Rhodopseudomonas palustris BisB5 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_567291.1 168656 D 316057 CDS YP_567292.1 91974633 4020607 169820..170602 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 170602 4020607 RPD_0151 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_567292.1 169820 D 316057 CDS YP_567293.1 91974634 4020608 complement(170705..171424) 1 NC_007958.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 171424 radC 4020608 radC Rhodopseudomonas palustris BisB5 DNA repair protein RadC YP_567293.1 170705 R 316057 CDS YP_567294.1 91974635 4020609 complement(171562..173370) 1 NC_007958.1 chemotaxis sensory transducer 173370 4020609 RPD_0153 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_567294.1 171562 R 316057 CDS YP_567295.1 91974636 4020610 173763..174749 1 NC_007958.1 hypothetical protein 174749 4020610 RPD_0154 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567295.1 173763 D 316057 CDS YP_567296.1 91974637 4020611 complement(175023..175847) 1 NC_007958.1 methionine aminopeptidase, type I 175847 4020611 RPD_0155 Rhodopseudomonas palustris BisB5 methionine aminopeptidase, type I YP_567296.1 175023 R 316057 CDS YP_567297.1 91974638 4020612 complement(175945..177258) 1 NC_007958.1 mechanosensitive ion channel MscS 177258 4020612 RPD_0156 Rhodopseudomonas palustris BisB5 mechanosensitive ion channel MscS YP_567297.1 175945 R 316057 CDS YP_567298.1 91974639 4020613 177483..179273 1 NC_007958.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 179273 4020613 RPD_0157 Rhodopseudomonas palustris BisB5 potassium/proton antiporter YP_567298.1 177483 D 316057 CDS YP_567299.1 91974640 4020614 complement(179274..180227) 1 NC_007958.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 180227 mepA 4020614 mepA Rhodopseudomonas palustris BisB5 penicillin-insensitive murein endopeptidase YP_567299.1 179274 R 316057 CDS YP_567300.1 91974641 4020615 180631..182859 1 NC_007958.1 GGDEF domain-containing protein 182859 4020615 RPD_0159 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_567300.1 180631 D 316057 CDS YP_567301.1 91974642 4020616 complement(183064..184008) 1 NC_007958.1 hypothetical protein 184008 4020616 RPD_0160 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567301.1 183064 R 316057 CDS YP_567302.1 91974643 4020617 184346..185770 1 NC_007958.1 twin-arginine translocation pathway signal 185770 4020617 RPD_0161 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_567302.1 184346 D 316057 CDS YP_567303.1 91974644 4020618 complement(185997..188471) 1 NC_007958.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 188471 pheT 4020618 pheT Rhodopseudomonas palustris BisB5 phenylalanyl-tRNA synthetase subunit beta YP_567303.1 185997 R 316057 CDS YP_567304.1 91974645 4020619 complement(188553..189137) 1 NC_007958.1 hypothetical protein 189137 4020619 RPD_0163 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567304.1 188553 R 316057 CDS YP_567305.1 91974646 4020620 complement(189275..190357) 1 NC_007958.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 190357 pheS 4020620 pheS Rhodopseudomonas palustris BisB5 phenylalanyl-tRNA synthetase subunit alpha YP_567305.1 189275 R 316057 CDS YP_567306.1 91974647 4020621 complement(190501..190860) 1 NC_007958.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 190860 rplT 4020621 rplT Rhodopseudomonas palustris BisB5 50S ribosomal protein L20 YP_567306.1 190501 R 316057 CDS YP_567307.1 91974648 4020622 complement(190948..191148) 1 NC_007958.1 50S ribosomal protein L35 191148 rpmI 4020622 rpmI Rhodopseudomonas palustris BisB5 50S ribosomal protein L35 YP_567307.1 190948 R 316057 CDS YP_567308.1 91974649 4020623 191512..191937 1 NC_007958.1 hypothetical protein 191937 4020623 RPD_0167 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567308.1 191512 D 316057 CDS YP_567309.1 91974650 4020624 complement(192320..192718) 1 NC_007958.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 192718 infC 4020624 infC Rhodopseudomonas palustris BisB5 translation initiation factor IF-3 YP_567309.1 192320 R 316057 CDS YP_567310.1 91974651 4020625 193195..193992 1 NC_007958.1 hypothetical protein 193992 4020625 RPD_0169 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567310.1 193195 D 316057 CDS YP_567311.1 91974652 4020626 complement(194098..195240) 1 NC_007958.1 4Fe-4S ferredoxin 195240 4020626 RPD_0170 Rhodopseudomonas palustris BisB5 4Fe-4S ferredoxin YP_567311.1 194098 R 316057 CDS YP_567312.1 91974653 4020627 complement(195300..195992) 1 NC_007958.1 glutathione S-transferase-like protein 195992 4020627 RPD_0171 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_567312.1 195300 R 316057 CDS YP_567313.1 91974654 4020628 196204..197010 1 NC_007958.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 197010 4020628 RPD_0172 Rhodopseudomonas palustris BisB5 undecaprenyl pyrophosphate phosphatase YP_567313.1 196204 D 316057 CDS YP_567314.1 91974655 4020629 complement(197071..198036) 1 NC_007958.1 3-beta hydroxysteroid dehydrogenase/isomerase 198036 4020629 RPD_0173 Rhodopseudomonas palustris BisB5 3-beta hydroxysteroid dehydrogenase/isomerase YP_567314.1 197071 R 316057 CDS YP_567315.1 91974656 4020631 198454..199068 1 NC_007958.1 3'-5' exonuclease 199068 4020631 RPD_0174 Rhodopseudomonas palustris BisB5 3'-5' exonuclease YP_567315.1 198454 D 316057 CDS YP_567316.1 91974657 4020632 199311..200081 1 NC_007958.1 hypothetical protein 200081 4020632 RPD_0175 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567316.1 199311 D 316057 CDS YP_567317.1 91974658 4020633 200078..200743 1 NC_007958.1 OstA-like protein 200743 4020633 RPD_0176 Rhodopseudomonas palustris BisB5 OstA-like protein YP_567317.1 200078 D 316057 CDS YP_567318.1 91974659 4020634 200801..201754 1 NC_007958.1 ABC transporter-like protein 201754 4020634 RPD_0177 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567318.1 200801 D 316057 CDS YP_567319.1 91974660 4020635 201922..203562 1 NC_007958.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 203562 4020635 RPD_0178 Rhodopseudomonas palustris BisB5 RNA polymerase factor sigma-54 YP_567319.1 201922 D 316057 CDS YP_567320.1 91974661 4020636 203618..204226 1 NC_007958.1 sigma 54 modulation protein/ribosomal protein S30EA 204226 4020636 RPD_0179 Rhodopseudomonas palustris BisB5 sigma 54 modulation protein/ribosomal protein S30EA YP_567320.1 203618 D 316057 CDS YP_567321.1 91974662 4020637 204510..204971 1 NC_007958.1 PTS IIA-like nitrogen-regulatory protein PtsN 204971 4020637 RPD_0180 Rhodopseudomonas palustris BisB5 PTS IIA-like nitrogen-regulatory protein PtsN YP_567321.1 204510 D 316057 CDS YP_567322.1 91974663 4020638 complement(205475..205741) 1 NC_007958.1 hypothetical protein 205741 4020638 RPD_0181 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567322.1 205475 R 316057 CDS YP_567323.1 91974664 4020639 complement(205792..206217) 1 NC_007958.1 heat shock protein Hsp20 206217 4020639 RPD_0182 Rhodopseudomonas palustris BisB5 heat shock protein Hsp20 YP_567323.1 205792 R 316057 CDS YP_567324.1 91974665 4020640 complement(206368..207462) 1 NC_007958.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 207462 ugpC 4020640 ugpC Rhodopseudomonas palustris BisB5 glycerol-3-phosphate transporter ATP-binding subunit YP_567324.1 206368 R 316057 CDS YP_567325.1 91974666 4020641 complement(207468..208316) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 208316 4020641 RPD_0184 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_567325.1 207468 R 316057 CDS YP_567326.1 91974667 4020642 complement(208316..209230) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 209230 4020642 RPD_0185 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_567326.1 208316 R 316057 CDS YP_567327.1 91974668 4020643 complement(209323..210648) 1 NC_007958.1 extracellular solute-binding protein 210648 4020643 RPD_0186 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_567327.1 209323 R 316057 CDS YP_567328.1 91974669 4020644 complement(210854..212059) 1 NC_007958.1 L-carnitine dehydratase/bile acid-inducible protein F 212059 4020644 RPD_0187 Rhodopseudomonas palustris BisB5 L-carnitine dehydratase/bile acid-inducible protein F YP_567328.1 210854 R 316057 CDS YP_567329.1 91974670 4020646 complement(212363..212821) 1 NC_007958.1 hypothetical protein 212821 4020646 RPD_0188 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567329.1 212363 R 316057 CDS YP_567330.1 91974671 4020647 212916..214253 1 NC_007958.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 214253 4020647 RPD_0189 Rhodopseudomonas palustris BisB5 3-phosphoshikimate 1-carboxyvinyltransferase YP_567330.1 212916 D 316057 CDS YP_567331.1 91974672 4020648 complement(214271..214945) 1 NC_007958.1 hypothetical protein 214945 4020648 RPD_0190 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567331.1 214271 R 316057 CDS YP_567332.1 91974673 4020649 215116..215754 1 NC_007958.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 215754 cmk 4020649 cmk Rhodopseudomonas palustris BisB5 cytidylate kinase YP_567332.1 215116 D 316057 CDS YP_567333.1 91974674 4020650 216049..217746 1 NC_007958.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 217746 rpsA 4020650 rpsA Rhodopseudomonas palustris BisB5 30S ribosomal protein S1 YP_567333.1 216049 D 316057 CDS YP_567334.1 91974675 4020651 217997..218977 1 NC_007958.1 signal peptide peptidase SppA, 36K type 218977 4020651 RPD_0193 Rhodopseudomonas palustris BisB5 signal peptide peptidase SppA, 36K type YP_567334.1 217997 D 316057 CDS YP_567335.1 91974676 4020652 219124..219429 1 NC_007958.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 219429 ihfB 4020652 ihfB Rhodopseudomonas palustris BisB5 integration host factor subunit beta YP_567335.1 219124 D 316057 CDS YP_567336.1 91974677 4020653 219442..219855 1 NC_007958.1 hypothetical protein 219855 4020653 RPD_0195 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567336.1 219442 D 316057 CDS YP_567337.1 91974678 4020654 219911..220567 1 NC_007958.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 220567 4020654 RPD_0196 Rhodopseudomonas palustris BisB5 N-(5'-phosphoribosyl)anthranilate isomerase YP_567337.1 219911 D 316057 CDS YP_567338.1 91974679 4020655 220569..221783 1 NC_007958.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 221783 4020655 RPD_0197 Rhodopseudomonas palustris BisB5 tryptophan synthase subunit beta YP_567338.1 220569 D 316057 CDS YP_567339.1 91974680 4020656 221783..222619 1 NC_007958.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 222619 trpA 4020656 trpA Rhodopseudomonas palustris BisB5 tryptophan synthase subunit alpha YP_567339.1 221783 D 316057 CDS YP_567340.1 91974681 4020657 222727..223695 1 NC_007958.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 223695 4020657 RPD_0199 Rhodopseudomonas palustris BisB5 acetyl-CoA carboxylase subunit beta YP_567340.1 222727 D 316057 CDS YP_567341.1 91974682 4020658 223692..225038 1 NC_007958.1 FolC bifunctional protein 225038 4020658 RPD_0200 Rhodopseudomonas palustris BisB5 FolC bifunctional protein YP_567341.1 223692 D 316057 CDS YP_567342.1 91974683 4020659 complement(225390..225710) 1 NC_007958.1 thioredoxin 225710 4020659 RPD_0201 Rhodopseudomonas palustris BisB5 thioredoxin YP_567342.1 225390 R 316057 CDS YP_567343.1 91974684 4020660 complement(225807..229286) 1 NC_007958.1 UvrD/REP helicase 229286 4020660 RPD_0202 Rhodopseudomonas palustris BisB5 UvrD/REP helicase YP_567343.1 225807 R 316057 CDS YP_567344.1 91974685 4020661 complement(229283..232432) 1 NC_007958.1 hypothetical protein 232432 4020661 RPD_0203 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567344.1 229283 R 316057 CDS YP_567345.1 91974686 4020662 complement(232504..233277) 1 NC_007958.1 nucleotidyl transferase 233277 4020662 RPD_0204 Rhodopseudomonas palustris BisB5 nucleotidyl transferase YP_567345.1 232504 R 316057 CDS YP_567346.1 91974687 4020663 complement(233402..233716) 1 NC_007958.1 hypothetical protein 233716 4020663 RPD_0205 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567346.1 233402 R 316057 CDS YP_567347.1 91974688 4020664 complement(233930..235447) 1 NC_007958.1 hypothetical protein 235447 4020664 RPD_0206 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567347.1 233930 R 316057 CDS YP_567348.1 91974689 4020665 complement(235444..237957) 1 NC_007958.1 PAS/PAC sensor signal transduction histidine kinase 237957 4020665 RPD_0207 Rhodopseudomonas palustris BisB5 PAS/PAC sensor signal transduction histidine kinase YP_567348.1 235444 R 316057 CDS YP_567349.1 91974690 4020666 complement(238137..238595) 1 NC_007958.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 238595 dut 4020666 dut Rhodopseudomonas palustris BisB5 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_567349.1 238137 R 316057 CDS YP_567350.2 228924659 4020667 complement(238592..240049) 1 NC_007958.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; in the alphaproteobacteria, this protein contains an N-terminal SbtC-like domain; bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 240049 4020667 RPD_0209 Rhodopseudomonas palustris BisB5 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_567350.2 238592 R 316057 CDS YP_567351.1 91974692 4020668 complement(240150..241724) 1 NC_007958.1 2-polyprenylphenol 6-hydroxylase 241724 4020668 RPD_0210 Rhodopseudomonas palustris BisB5 2-polyprenylphenol 6-hydroxylase YP_567351.1 240150 R 316057 CDS YP_567352.1 91974693 4020669 complement(241721..242482) 1 NC_007958.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 242482 ubiE 4020669 ubiE Rhodopseudomonas palustris BisB5 ubiquinone/menaquinone biosynthesis methyltransferase YP_567352.1 241721 R 316057 CDS YP_567353.1 91974694 4020670 242693..243574 1 NC_007958.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 243574 4020670 RPD_0212 Rhodopseudomonas palustris BisB5 formamidopyrimidine-DNA glycosylase YP_567353.1 242693 D 316057 CDS YP_567354.1 91974695 4020671 complement(243743..244705) 1 NC_007958.1 transposase, IS4 244705 4020671 RPD_0213 Rhodopseudomonas palustris BisB5 transposase, IS4 YP_567354.1 243743 R 316057 CDS YP_567355.1 91974696 4020672 complement(245415..246779) 1 NC_007958.1 peptidoglycan binding domain-containing protein 246779 4020672 RPD_0214 Rhodopseudomonas palustris BisB5 peptidoglycan binding domain-containing protein YP_567355.1 245415 R 316057 CDS YP_567356.1 91974697 4020673 246901..247701 1 NC_007958.1 UBA/THIF-type NAD/FAD binding domain-containing protein 247701 4020673 RPD_0215 Rhodopseudomonas palustris BisB5 UBA/THIF-type NAD/FAD binding domain-containing protein YP_567356.1 246901 D 316057 CDS YP_567357.1 91974698 4020674 complement(247862..248824) 1 NC_007958.1 transposase, IS4 248824 4020674 RPD_0216 Rhodopseudomonas palustris BisB5 transposase, IS4 YP_567357.1 247862 R 316057 CDS YP_567358.1 91974699 4020675 complement(249040..250041) 1 NC_007958.1 D-isomer specific 2-hydroxyacid dehydrogenase 250041 4020675 RPD_0217 Rhodopseudomonas palustris BisB5 D-isomer specific 2-hydroxyacid dehydrogenase YP_567358.1 249040 R 316057 CDS YP_567359.1 91974700 4020676 250275..250799 1 NC_007958.1 hypothetical protein 250799 4020676 RPD_0218 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567359.1 250275 D 316057 CDS YP_567360.1 91974701 4020677 complement(251081..251569) 1 NC_007958.1 ferric-uptake regulator 251569 4020677 RPD_0219 Rhodopseudomonas palustris BisB5 ferric-uptake regulator YP_567360.1 251081 R 316057 CDS YP_567361.1 91974702 4020678 251784..252347 1 NC_007958.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 252347 4020678 RPD_0220 Rhodopseudomonas palustris BisB5 3-hydroxydecanoyl-(acyl carrier protein) dehydratase YP_567361.1 251784 D 316057 CDS YP_567362.1 91974703 4020679 252427..253653 1 NC_007958.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I 253653 4020679 RPD_0221 Rhodopseudomonas palustris BisB5 3-oxoacyl-(acyl carrier protein) synthase I YP_567362.1 252427 D 316057 CDS YP_567363.1 91974704 4020680 253850..254695 1 NC_007958.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 254695 4020680 RPD_0222 Rhodopseudomonas palustris BisB5 enoyl-(acyl carrier protein) reductase YP_567363.1 253850 D 316057 CDS YP_567364.1 91974705 4020681 complement(255039..257237) 1 NC_007958.1 catalase/peroxidase HPI 257237 4020681 RPD_0223 Rhodopseudomonas palustris BisB5 catalase/peroxidase HPI YP_567364.1 255039 R 316057 CDS YP_567365.1 91974706 4020682 257482..258420 1 NC_007958.1 LysR family transcriptional regulator 258420 4020682 RPD_0224 Rhodopseudomonas palustris BisB5 LysR family transcriptional regulator YP_567365.1 257482 D 316057 CDS YP_567366.1 91974707 4020683 complement(258512..260194) 1 NC_007958.1 methyl-accepting chemotaxis protein 260194 4020683 RPD_0225 Rhodopseudomonas palustris BisB5 methyl-accepting chemotaxis protein YP_567366.1 258512 R 316057 CDS YP_567367.1 91974708 4020684 complement(260510..262195) 1 NC_007958.1 methyl-accepting chemotaxis protein 262195 4020684 RPD_0226 Rhodopseudomonas palustris BisB5 methyl-accepting chemotaxis protein YP_567367.1 260510 R 316057 CDS YP_567368.1 91974709 4020685 complement(262822..264990) 1 NC_007958.1 polynucleotide phosphorylase/polyadenylase 264990 4020685 RPD_0227 Rhodopseudomonas palustris BisB5 polynucleotide phosphorylase/polyadenylase YP_567368.1 262822 R 316057 CDS YP_567369.1 91974710 4020686 complement(265334..265603) 1 NC_007958.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 265603 rpsO 4020686 rpsO Rhodopseudomonas palustris BisB5 30S ribosomal protein S15 YP_567369.1 265334 R 316057 CDS YP_567370.1 91974711 4020687 complement(265606..266712) 1 NC_007958.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 266712 truB 4020687 truB Rhodopseudomonas palustris BisB5 tRNA pseudouridine synthase B YP_567370.1 265606 R 316057 CDS YP_567371.1 91974712 4020688 complement(266712..267122) 1 NC_007958.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 267122 rbfA 4020688 rbfA Rhodopseudomonas palustris BisB5 ribosome-binding factor A YP_567371.1 266712 R 316057 CDS YP_567372.1 91974713 4020689 complement(267294..269945) 1 NC_007958.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 269945 infB 4020689 infB Rhodopseudomonas palustris BisB5 translation initiation factor IF-2 YP_567372.1 267294 R 316057 CDS YP_567373.1 91974714 4020690 complement(269938..270732) 1 NC_007958.1 hypothetical protein 270732 4020690 RPD_0232 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567373.1 269938 R 316057 CDS YP_567374.1 91974715 4020691 complement(270895..272517) 1 NC_007958.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 272517 nusA 4020691 nusA Rhodopseudomonas palustris BisB5 transcription elongation factor NusA YP_567374.1 270895 R 316057 CDS YP_567375.1 91974716 4020692 complement(272520..273308) 1 NC_007958.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 273308 4020692 RPD_0234 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567375.1 272520 R 316057 CDS YP_567376.1 91974717 4020693 273587..274672 1 NC_007958.1 hypothetical protein 274672 4020693 RPD_0235 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567376.1 273587 D 316057 CDS YP_567377.1 91974718 4020694 complement(274805..275575) 1 NC_007958.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 275575 trmB 4020694 trmB Rhodopseudomonas palustris BisB5 tRNA (guanine-N(7)-)-methyltransferase YP_567377.1 274805 R 316057 CDS YP_567378.1 91974719 4020695 complement(275694..276113) 1 NC_007958.1 XRE family transcriptional regulator 276113 4020695 RPD_0237 Rhodopseudomonas palustris BisB5 XRE family transcriptional regulator YP_567378.1 275694 R 316057 CDS YP_567379.1 91974720 4020696 complement(276304..277914) 1 NC_007958.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 277914 lnt 4020696 lnt Rhodopseudomonas palustris BisB5 apolipoprotein N-acyltransferase YP_567379.1 276304 R 316057 CDS YP_567380.1 91974721 4020697 complement(277926..279053) 1 NC_007958.1 HlyC/CorC family transporters 279053 4020697 RPD_0239 Rhodopseudomonas palustris BisB5 HlyC/CorC family transporters YP_567380.1 277926 R 316057 CDS YP_567381.1 91974722 4020698 complement(279055..279642) 1 NC_007958.1 hypothetical protein 279642 4020698 RPD_0240 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567381.1 279055 R 316057 CDS YP_567382.1 91974723 4020699 complement(279642..280697) 1 NC_007958.1 PhoH-like protein 280697 4020699 RPD_0241 Rhodopseudomonas palustris BisB5 PhoH-like protein YP_567382.1 279642 R 316057 CDS YP_567383.1 91974724 4020700 complement(280703..282124) 1 NC_007958.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 282124 4020700 RPD_0242 Rhodopseudomonas palustris BisB5 (dimethylallyl)adenosine tRNA methylthiotransferase YP_567383.1 280703 R 316057 CDS YP_567384.1 91974725 4020701 complement(282222..282875) 1 NC_007958.1 HAD family hydrolase 282875 4020701 RPD_0243 Rhodopseudomonas palustris BisB5 HAD family hydrolase YP_567384.1 282222 R 316057 CDS YP_567385.1 91974726 4020702 complement(282970..283401) 1 NC_007958.1 ferric-uptake regulator 283401 4020702 RPD_0244 Rhodopseudomonas palustris BisB5 ferric-uptake regulator YP_567385.1 282970 R 316057 CDS YP_567386.1 91974727 4020703 complement(283463..283948) 1 NC_007958.1 ribosomal-protein-alanine acetyltransferase 283948 4020703 RPD_0245 Rhodopseudomonas palustris BisB5 ribosomal-protein-alanine acetyltransferase YP_567386.1 283463 R 316057 CDS YP_567387.1 91974728 4020704 complement(283959..284654) 1 NC_007958.1 peptidase M22, glycoprotease 284654 4020704 RPD_0246 Rhodopseudomonas palustris BisB5 peptidase M22, glycoprotease YP_567387.1 283959 R 316057 CDS YP_567388.1 91974729 4020705 complement(284798..285364) 1 NC_007958.1 nitrogen-fixing NifU-like protein 285364 4020705 RPD_0247 Rhodopseudomonas palustris BisB5 nitrogen-fixing NifU-like protein YP_567388.1 284798 R 316057 CDS YP_567389.1 91974730 4020706 complement(285516..286010) 1 NC_007958.1 hypothetical protein 286010 4020706 RPD_0248 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567389.1 285516 R 316057 CDS YP_567390.2 162138292 4020707 complement(286169..287215) 1 NC_007958.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 287215 4020707 RPD_0249 Rhodopseudomonas palustris BisB5 tryptophanyl-tRNA synthetase YP_567390.2 286169 R 316057 CDS YP_567391.1 91974732 4020708 complement(287292..288848) 1 NC_007958.1 integral membrane protein MviN 288848 4020708 RPD_0250 Rhodopseudomonas palustris BisB5 integral membrane protein MviN YP_567391.1 287292 R 316057 CDS YP_567392.1 91974733 4020709 289114..290115 1 NC_007958.1 PfkB 290115 4020709 RPD_0251 Rhodopseudomonas palustris BisB5 PfkB YP_567392.1 289114 D 316057 CDS YP_567393.1 91974734 4020710 complement(290262..291956) 1 NC_007958.1 activates fatty acids by binding to coenzyme A; AMP-binding domain-containing protein 291956 4020710 RPD_0252 Rhodopseudomonas palustris BisB5 AMP-binding domain-containing protein YP_567393.1 290262 R 316057 CDS YP_567394.1 91974735 4020711 complement(292089..293276) 1 NC_007958.1 beta-lactamase 293276 4020711 RPD_0253 Rhodopseudomonas palustris BisB5 beta-lactamase YP_567394.1 292089 R 316057 CDS YP_567395.1 91974736 4020712 293543..293869 1 NC_007958.1 hypothetical protein 293869 4020712 RPD_0254 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567395.1 293543 D 316057 CDS YP_567396.1 91974737 4020713 294048..295541 1 NC_007958.1 succinic semialdehyde dehydrogenase 295541 4020713 RPD_0255 Rhodopseudomonas palustris BisB5 succinic semialdehyde dehydrogenase YP_567396.1 294048 D 316057 CDS YP_567397.1 91974738 4020714 complement(295704..296390) 1 NC_007958.1 hypothetical protein 296390 4020714 RPD_0256 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567397.1 295704 R 316057 CDS YP_567398.1 91974739 4020715 complement(296392..297378) 1 NC_007958.1 D-isomer specific 2-hydroxyacid dehydrogenase 297378 4020715 RPD_0257 Rhodopseudomonas palustris BisB5 D-isomer specific 2-hydroxyacid dehydrogenase YP_567398.1 296392 R 316057 CDS YP_567399.1 91974740 4020716 complement(297378..298202) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 298202 4020716 RPD_0258 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_567399.1 297378 R 316057 CDS YP_567400.1 91974741 4020717 complement(298199..299011) 1 NC_007958.1 ABC transporter-like protein 299011 4020717 RPD_0259 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567400.1 298199 R 316057 CDS YP_567401.1 91974742 4020718 complement(299022..300143) 1 NC_007958.1 perplasmic binding protein of ABC transporter 300143 4020718 RPD_0260 Rhodopseudomonas palustris BisB5 perplasmic binding protein of ABC transporter YP_567401.1 299022 R 316057 CDS YP_567402.1 91974743 4020719 300297..301109 1 NC_007958.1 creatininase 301109 4020719 RPD_0261 Rhodopseudomonas palustris BisB5 creatininase YP_567402.1 300297 D 316057 CDS YP_567403.1 91974744 4020720 complement(301191..302822) 1 NC_007958.1 ferredoxin-dependent glutamate synthase 302822 4020720 RPD_0262 Rhodopseudomonas palustris BisB5 ferredoxin-dependent glutamate synthase YP_567403.1 301191 R 316057 CDS YP_567404.1 91974745 4020721 303023..304009 1 NC_007958.1 hypothetical protein 304009 4020721 RPD_0263 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567404.1 303023 D 316057 CDS YP_567405.1 91974746 4020722 304010..305326 1 NC_007958.1 FolC bifunctional protein 305326 4020722 RPD_0264 Rhodopseudomonas palustris BisB5 FolC bifunctional protein YP_567405.1 304010 D 316057 CDS YP_567406.1 91974747 4020723 305411..306409 1 NC_007958.1 zinc-binding alcohol dehydrogenase 306409 4020723 RPD_0265 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_567406.1 305411 D 316057 CDS YP_567407.1 91974748 4020724 complement(306439..306675) 1 NC_007958.1 hypothetical protein 306675 4020724 RPD_0266 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567407.1 306439 R 316057 CDS YP_567408.1 91974749 4020726 307917..308537 1 NC_007958.1 hypothetical protein 308537 4020726 RPD_0267 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567408.1 307917 D 316057 CDS YP_567409.1 91974750 4020727 308588..308866 1 NC_007958.1 transglycosylase-associated protein 308866 4020727 RPD_0268 Rhodopseudomonas palustris BisB5 transglycosylase-associated protein YP_567409.1 308588 D 316057 CDS YP_567410.1 91974751 4020728 complement(309048..309830) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 309830 4020728 RPD_0269 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_567410.1 309048 R 316057 CDS YP_567411.1 91974752 4020729 310089..311156 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 311156 4020729 RPD_0270 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_567411.1 310089 D 316057 CDS YP_567412.1 91974753 4020730 311182..312342 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 312342 4020730 RPD_0271 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_567412.1 311182 D 316057 CDS YP_567413.1 91974754 4020731 312486..313292 1 NC_007958.1 enoyl-CoA hydratase/isomerase 313292 4020731 RPD_0272 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_567413.1 312486 D 316057 CDS YP_567414.1 91974755 4020732 complement(313355..314119) 1 NC_007958.1 hypothetical protein 314119 4020732 RPD_0273 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567414.1 313355 R 316057 CDS YP_567415.1 91974756 4020733 complement(314122..314910) 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 314910 4020733 RPD_0274 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_567415.1 314122 R 316057 CDS YP_567416.1 91974757 4020734 complement(315107..316312) 1 NC_007958.1 putative ureA/short-chain amide ABC transporter 316312 4020734 RPD_0275 Rhodopseudomonas palustris BisB5 putative ureA/short-chain amide ABC transporter YP_567416.1 315107 R 316057 CDS YP_567417.1 91974758 4020735 316528..317322 1 NC_007958.1 nuclease 317322 4020735 RPD_0276 Rhodopseudomonas palustris BisB5 nuclease YP_567417.1 316528 D 316057 CDS YP_567418.1 91974759 4020736 317343..318836 1 NC_007958.1 peptidase M48, Ste24p 318836 4020736 RPD_0277 Rhodopseudomonas palustris BisB5 peptidase M48, Ste24p YP_567418.1 317343 D 316057 CDS YP_567419.1 91974760 4020737 complement(319035..320333) 1 NC_007958.1 transcription factor CarD 320333 4020737 RPD_0278 Rhodopseudomonas palustris BisB5 transcription factor CarD YP_567419.1 319035 R 316057 CDS YP_567420.1 91974761 4020738 complement(320466..320804) 1 NC_007958.1 4Fe-4S ferredoxin 320804 4020738 RPD_0279 Rhodopseudomonas palustris BisB5 4Fe-4S ferredoxin YP_567420.1 320466 R 316057 CDS YP_567421.1 91974762 4020739 complement(320879..321148) 1 NC_007958.1 RNA-binding S4 321148 4020739 RPD_0280 Rhodopseudomonas palustris BisB5 RNA-binding S4 YP_567421.1 320879 R 316057 CDS YP_567422.1 91974763 4020740 complement(321188..324547) 1 NC_007958.1 helicase-like protein 324547 4020740 RPD_0281 Rhodopseudomonas palustris BisB5 helicase-like protein YP_567422.1 321188 R 316057 CDS YP_567423.1 91974764 4020741 complement(324975..325856) 1 NC_007958.1 hypothetical protein 325856 4020741 RPD_0282 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567423.1 324975 R 316057 CDS YP_567424.1 91974765 4020742 326169..326474 1 NC_007958.1 required for 70S ribosome assembly; 50S ribosomal protein L28 326474 rpmB 4020742 rpmB Rhodopseudomonas palustris BisB5 50S ribosomal protein L28 YP_567424.1 326169 D 316057 CDS YP_567425.1 91974766 4020743 326692..330009 1 NC_007958.1 multi-sensor hybrid histidine kinase 330009 4020743 RPD_0284 Rhodopseudomonas palustris BisB5 multi-sensor hybrid histidine kinase YP_567425.1 326692 D 316057 CDS YP_567426.1 91974767 4020744 complement(330097..331176) 1 NC_007958.1 hypothetical protein 331176 4020744 RPD_0285 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567426.1 330097 R 316057 CDS YP_567427.1 91974768 4020745 complement(331173..333068) 1 NC_007958.1 cobalt chelatase, pCobT subunit 333068 4020745 RPD_0286 Rhodopseudomonas palustris BisB5 cobalt chelatase, pCobT subunit YP_567427.1 331173 R 316057 CDS YP_567428.1 91974769 4020746 complement(333223..334218) 1 NC_007958.1 cobalt chelatase, pCobS small subunit 334218 4020746 RPD_0287 Rhodopseudomonas palustris BisB5 cobalt chelatase, pCobS small subunit YP_567428.1 333223 R 316057 CDS YP_567429.1 91974770 4020749 complement(334887..335534) 1 NC_007958.1 heat shock protein DnaJ-like 335534 4020749 RPD_0290 Rhodopseudomonas palustris BisB5 heat shock protein DnaJ-like YP_567429.1 334887 R 316057 CDS YP_567430.1 91974771 4020750 335604..335909 1 NC_007958.1 BolA-like protein 335909 4020750 RPD_0291 Rhodopseudomonas palustris BisB5 BolA-like protein YP_567430.1 335604 D 316057 CDS YP_567431.1 91974772 4020751 complement(335951..337273) 1 NC_007958.1 hypothetical protein 337273 4020751 RPD_0292 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567431.1 335951 R 316057 CDS YP_567432.1 91974773 4020752 complement(337288..338436) 1 NC_007958.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 338436 aroB 4020752 aroB Rhodopseudomonas palustris BisB5 3-dehydroquinate synthase YP_567432.1 337288 R 316057 CDS YP_567433.1 91974774 4020753 complement(338433..339047) 1 NC_007958.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 339047 4020753 RPD_0294 Rhodopseudomonas palustris BisB5 shikimate kinase YP_567433.1 338433 R 316057 CDS YP_567434.1 91974775 4020754 339225..339371 1 NC_007958.1 hypothetical protein 339371 4020754 RPD_0295 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567434.1 339225 D 316057 CDS YP_567435.1 91974776 4020755 339389..340444 1 NC_007958.1 tyrosine recombinase XerD 340444 4020755 RPD_0296 Rhodopseudomonas palustris BisB5 tyrosine recombinase XerD YP_567435.1 339389 D 316057 CDS YP_567436.1 91974777 4020756 340595..341569 1 NC_007958.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 341569 4020756 RPD_0297 Rhodopseudomonas palustris BisB5 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_567436.1 340595 D 316057 CDS YP_567437.1 91974778 4020757 341987..343450 1 NC_007958.1 hypothetical protein 343450 4020757 RPD_0298 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567437.1 341987 D 316057 CDS YP_567438.1 91974779 4020758 complement(343844..346684) 1 NC_007958.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 346684 4020758 RPD_0299 Rhodopseudomonas palustris BisB5 preprotein translocase subunit SecA YP_567438.1 343844 R 316057 CDS YP_567439.1 91974780 4020759 347027..347944 1 NC_007958.1 PpiC-type peptidyl-prolyl cis-trans isomerase 347944 4020759 RPD_0300 Rhodopseudomonas palustris BisB5 PpiC-type peptidyl-prolyl cis-trans isomerase YP_567439.1 347027 D 316057 CDS YP_567440.1 91974781 4020760 complement(348152..349207) 1 NC_007958.1 acyltransferase 3 349207 4020760 RPD_0301 Rhodopseudomonas palustris BisB5 acyltransferase 3 YP_567440.1 348152 R 316057 CDS YP_567441.1 91974782 4020761 349371..351848 1 NC_007958.1 ATP-dependent helicase HrpB 351848 4020761 RPD_0302 Rhodopseudomonas palustris BisB5 ATP-dependent helicase HrpB YP_567441.1 349371 D 316057 CDS YP_567442.1 91974783 4020762 351980..352492 1 NC_007958.1 hypothetical protein 352492 4020762 RPD_0303 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567442.1 351980 D 316057 CDS YP_567443.1 91974784 4020763 complement(352495..353367) 1 NC_007958.1 hypothetical protein 353367 4020763 RPD_0304 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567443.1 352495 R 316057 CDS YP_567444.1 91974785 4020764 complement(353514..354239) 1 NC_007958.1 acetoacetyl-CoA reductase 354239 4020764 RPD_0305 Rhodopseudomonas palustris BisB5 acetoacetyl-CoA reductase YP_567444.1 353514 R 316057 CDS YP_567445.1 91974786 4020765 complement(354417..355595) 1 NC_007958.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 355595 4020765 RPD_0306 Rhodopseudomonas palustris BisB5 acetyl-CoA acetyltransferase YP_567445.1 354417 R 316057 CDS YP_567446.1 91974787 4020766 355878..356486 1 NC_007958.1 polyhydroxyalkanoate synthesis repressor PhaR 356486 4020766 RPD_0307 Rhodopseudomonas palustris BisB5 polyhydroxyalkanoate synthesis repressor PhaR YP_567446.1 355878 D 316057 CDS YP_567447.1 91974788 4020767 complement(356488..358239) 1 NC_007958.1 GGDEF domain-containing protein 358239 4020767 RPD_0308 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_567447.1 356488 R 316057 CDS YP_567448.1 91974789 4020768 358341..358739 1 NC_007958.1 hypothetical protein 358739 4020768 RPD_0309 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567448.1 358341 D 316057 CDS YP_567449.1 91974790 4020769 complement(358756..359406) 1 NC_007958.1 hypothetical protein 359406 4020769 RPD_0310 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567449.1 358756 R 316057 CDS YP_567450.1 91974791 4020770 complement(359642..359824) 1 NC_007958.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 359824 rpmF 4020770 rpmF Rhodopseudomonas palustris BisB5 50S ribosomal protein L32 YP_567450.1 359642 R 316057 CDS YP_567451.1 91974792 4020771 complement(360016..360705) 1 NC_007958.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 360705 mtgA 4020771 mtgA Rhodopseudomonas palustris BisB5 monofunctional biosynthetic peptidoglycan transglycosylase YP_567451.1 360016 R 316057 CDS YP_567452.1 91974793 4020772 360822..361787 1 NC_007958.1 polyprenyl synthetase 361787 4020772 RPD_0313 Rhodopseudomonas palustris BisB5 polyprenyl synthetase YP_567452.1 360822 D 316057 CDS YP_567453.1 91974794 4020773 361795..362481 1 NC_007958.1 hypothetical protein 362481 4020773 RPD_0314 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567453.1 361795 D 316057 CDS YP_567454.1 91974795 4020774 362564..364216 1 NC_007958.1 Na+/H+ antiporter 364216 4020774 RPD_0315 Rhodopseudomonas palustris BisB5 Na+/H+ antiporter YP_567454.1 362564 D 316057 CDS YP_567455.1 91974796 4020775 complement(364246..365580) 1 NC_007958.1 ferric reductase transmembrane component-like protein 365580 4020775 RPD_0316 Rhodopseudomonas palustris BisB5 ferric reductase transmembrane component-like protein YP_567455.1 364246 R 316057 CDS YP_567456.1 91974797 4020776 complement(365780..367105) 1 NC_007958.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 367105 ispG 4020776 ispG Rhodopseudomonas palustris BisB5 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_567456.1 365780 R 316057 CDS YP_567457.1 91974798 4020777 complement(367135..368049) 1 NC_007958.1 hypothetical protein 368049 4020777 RPD_0318 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567457.1 367135 R 316057 CDS YP_567458.1 91974799 4020778 complement(368182..368670) 1 NC_007958.1 zinc uptake regulator ZUR 368670 4020778 RPD_0319 Rhodopseudomonas palustris BisB5 zinc uptake regulator ZUR YP_567458.1 368182 R 316057 CDS YP_567459.1 91974800 4020779 complement(368865..370073) 1 NC_007958.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 370073 4020779 RPD_0320 Rhodopseudomonas palustris BisB5 beta-ketoadipyl CoA thiolase YP_567459.1 368865 R 316057 CDS YP_567460.1 91974801 4020780 370238..373009 1 NC_007958.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 373009 4020780 RPD_0321 Rhodopseudomonas palustris BisB5 DNA mismatch repair protein MutS YP_567460.1 370238 D 316057 CDS YP_567461.1 91974802 4020781 complement(373035..374597) 1 NC_007958.1 acetyl-CoA hydrolase 374597 4020781 RPD_0322 Rhodopseudomonas palustris BisB5 acetyl-CoA hydrolase YP_567461.1 373035 R 316057 CDS YP_567462.1 91974803 4020782 complement(375533..376999) 1 NC_007958.1 putative Omp2b porin 376999 4020782 RPD_0323 Rhodopseudomonas palustris BisB5 putative Omp2b porin YP_567462.1 375533 R 316057 CDS YP_567463.1 91974804 4020783 377484..377993 1 NC_007958.1 regulatory protein MarR 377993 4020783 RPD_0324 Rhodopseudomonas palustris BisB5 regulatory protein MarR YP_567463.1 377484 D 316057 CDS YP_567464.1 91974805 4020784 complement(378222..379013) 1 NC_007958.1 hypothetical protein 379013 4020784 RPD_0325 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567464.1 378222 R 316057 CDS YP_567465.1 91974806 4020786 379721..380266 1 NC_007958.1 hypothetical protein 380266 4020786 RPD_0326 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567465.1 379721 D 316057 CDS YP_567466.1 91974807 4020787 380435..381637 1 NC_007958.1 histidine kinase, dimerisation/phosphoacceptor 381637 4020787 RPD_0327 Rhodopseudomonas palustris BisB5 histidine kinase, dimerisation/phosphoacceptor YP_567466.1 380435 D 316057 CDS YP_567467.1 91974808 4020788 381649..382092 1 NC_007958.1 response regulator receiver 382092 4020788 RPD_0328 Rhodopseudomonas palustris BisB5 response regulator receiver YP_567467.1 381649 D 316057 CDS YP_567468.1 91974809 4020789 382089..382913 1 NC_007958.1 hypothetical protein 382913 4020789 RPD_0329 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567468.1 382089 D 316057 CDS YP_567469.1 91974810 4020790 complement(383067..384146) 1 NC_007958.1 putative ammonia monooxygenase 384146 4020790 RPD_0330 Rhodopseudomonas palustris BisB5 putative ammonia monooxygenase YP_567469.1 383067 R 316057 CDS YP_567470.1 91974811 4020791 384313..384822 1 NC_007958.1 hypothetical protein 384822 4020791 RPD_0331 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567470.1 384313 D 316057 CDS YP_567471.1 91974812 4020792 384922..385305 1 NC_007958.1 LrgA 385305 4020792 RPD_0332 Rhodopseudomonas palustris BisB5 LrgA YP_567471.1 384922 D 316057 CDS YP_567472.1 91974813 4020793 385302..386024 1 NC_007958.1 LrgB-like protein 386024 4020793 RPD_0333 Rhodopseudomonas palustris BisB5 LrgB-like protein YP_567472.1 385302 D 316057 CDS YP_567473.1 91974814 4020794 386266..386733 1 NC_007958.1 hypothetical protein 386733 4020794 RPD_0334 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567473.1 386266 D 316057 CDS YP_567474.1 91974815 4020795 complement(386777..387850) 1 NC_007958.1 phospholipase/carboxylesterase 387850 4020795 RPD_0335 Rhodopseudomonas palustris BisB5 phospholipase/carboxylesterase YP_567474.1 386777 R 316057 CDS YP_567475.1 91974816 4020796 complement(388007..389698) 1 NC_007958.1 chemotaxis sensory transducer 389698 4020796 RPD_0336 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_567475.1 388007 R 316057 CDS YP_567476.1 91974817 4020797 complement(390010..391701) 1 NC_007958.1 chemotaxis sensory transducer 391701 4020797 RPD_0337 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_567476.1 390010 R 316057 CDS YP_567477.1 91974818 4020798 392283..393380 1 NC_007958.1 hypothetical protein 393380 4020798 RPD_0338 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567477.1 392283 D 316057 CDS YP_567478.1 91974819 4020799 complement(393530..394186) 1 NC_007958.1 anti-sigma factor ChrR 394186 4020799 RPD_0339 Rhodopseudomonas palustris BisB5 anti-sigma factor ChrR YP_567478.1 393530 R 316057 CDS YP_567479.1 91974820 4020800 complement(394183..394770) 1 NC_007958.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 394770 4020800 RPD_0340 Rhodopseudomonas palustris BisB5 RNA polymerase sigma factor RpoE YP_567479.1 394183 R 316057 CDS YP_567480.1 91974821 4020801 395002..395274 1 NC_007958.1 hypothetical protein 395274 4020801 RPD_0341 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567480.1 395002 D 316057 CDS YP_567481.1 91974822 4020802 complement(395596..396153) 1 NC_007958.1 HNH endonuclease 396153 4020802 RPD_0342 Rhodopseudomonas palustris BisB5 HNH endonuclease YP_567481.1 395596 R 316057 CDS YP_567482.1 91974823 4020803 396439..397437 1 NC_007958.1 cysteine synthase A 397437 4020803 RPD_0343 Rhodopseudomonas palustris BisB5 cysteine synthase A YP_567482.1 396439 D 316057 CDS YP_567483.1 91974824 4020804 complement(397736..399184) 1 NC_007958.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 399184 4020804 RPD_0344 Rhodopseudomonas palustris BisB5 glycogen synthase YP_567483.1 397736 R 316057 CDS YP_567484.1 91974825 4020805 complement(399181..400455) 1 NC_007958.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 400455 glgC 4020805 glgC Rhodopseudomonas palustris BisB5 glucose-1-phosphate adenylyltransferase YP_567484.1 399181 R 316057 CDS YP_567485.1 91974826 4020806 complement(400757..403072) 1 NC_007958.1 oxidoreductase alpha (molybdopterin) subunit 403072 4020806 RPD_0346 Rhodopseudomonas palustris BisB5 oxidoreductase alpha (molybdopterin) subunit YP_567485.1 400757 R 316057 CDS YP_567486.1 91974827 4020812 complement(409676..410614) 1 NC_007958.1 PfkB 410614 4020812 RPD_0347 Rhodopseudomonas palustris BisB5 PfkB YP_567486.1 409676 R 316057 CDS YP_567487.1 91974828 4020813 complement(410826..411650) 1 NC_007958.1 hypothetical protein 411650 4020813 RPD_0348 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567487.1 410826 R 316057 CDS YP_567488.1 91974829 4020814 411884..412120 1 NC_007958.1 ChaB 412120 4020814 RPD_0349 Rhodopseudomonas palustris BisB5 ChaB YP_567488.1 411884 D 316057 CDS YP_567489.1 91974830 4020815 complement(412315..414354) 1 NC_007958.1 carbamoyl-phosphate synthase L chain, ATP-binding 414354 4020815 RPD_0350 Rhodopseudomonas palustris BisB5 carbamoyl-phosphate synthase L chain, ATP-binding YP_567489.1 412315 R 316057 CDS YP_567490.1 91974831 4020816 complement(414354..415961) 1 NC_007958.1 propionyl-CoA carboxylase 415961 4020816 RPD_0351 Rhodopseudomonas palustris BisB5 propionyl-CoA carboxylase YP_567490.1 414354 R 316057 CDS YP_567491.1 91974832 4020817 complement(416057..416791) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 416791 4020817 RPD_0352 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_567491.1 416057 R 316057 CDS YP_567492.1 91974833 4020818 complement(417000..418610) 1 NC_007958.1 AMP-dependent synthetase and ligase 418610 4020818 RPD_0353 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_567492.1 417000 R 316057 CDS YP_567493.1 91974834 4020819 complement(418647..419438) 1 NC_007958.1 enoyl-CoA hydratase/isomerase 419438 4020819 RPD_0354 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_567493.1 418647 R 316057 CDS YP_567494.1 91974835 4020820 complement(419471..420262) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 420262 4020820 RPD_0355 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_567494.1 419471 R 316057 CDS YP_567495.1 91974836 4020821 complement(420259..421437) 1 NC_007958.1 isovaleryl-CoA dehydrogenase 421437 4020821 RPD_0356 Rhodopseudomonas palustris BisB5 isovaleryl-CoA dehydrogenase YP_567495.1 420259 R 316057 CDS YP_567496.1 91974837 4020822 complement(421620..422846) 1 NC_007958.1 extracellular ligand-binding receptor 422846 4020822 RPD_0357 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_567496.1 421620 R 316057 CDS YP_567497.1 91974838 4020823 423299..424021 1 NC_007958.1 regulatory protein TetR 424021 4020823 RPD_0358 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_567497.1 423299 D 316057 CDS YP_567498.1 91974839 4020825 424666..425946 1 NC_007958.1 pseudouridine synthase RluD 425946 4020825 RPD_0359 Rhodopseudomonas palustris BisB5 pseudouridine synthase RluD YP_567498.1 424666 D 316057 CDS YP_567499.1 91974840 4020826 426165..427064 1 NC_007958.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 427064 4020826 RPD_0360 Rhodopseudomonas palustris BisB5 RNA polymerase factor sigma-32 YP_567499.1 426165 D 316057 CDS YP_567500.1 91974841 4020827 complement(427197..427559) 1 NC_007958.1 hypothetical protein 427559 4020827 RPD_0361 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567500.1 427197 R 316057 CDS YP_567501.1 91974842 4020828 complement(427695..428594) 1 NC_007958.1 beta-lactamase-like protein 428594 4020828 RPD_0362 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_567501.1 427695 R 316057 CDS YP_567502.1 91974843 4020829 428704..429039 1 NC_007958.1 regulatory protein ArsR 429039 4020829 RPD_0363 Rhodopseudomonas palustris BisB5 regulatory protein ArsR YP_567502.1 428704 D 316057 CDS YP_567503.1 91974844 4020830 429057..429875 1 NC_007958.1 hypothetical protein 429875 4020830 RPD_0364 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567503.1 429057 D 316057 CDS YP_567504.1 91974845 4020831 complement(429936..431549) 1 NC_007958.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 431549 4020831 RPD_0365 Rhodopseudomonas palustris BisB5 phosphoenolpyruvate carboxykinase YP_567504.1 429936 R 316057 CDS YP_567505.1 91974846 4020832 complement(431739..432473) 1 NC_007958.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 432473 4020832 RPD_0366 Rhodopseudomonas palustris BisB5 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_567505.1 431739 R 316057 CDS YP_567506.1 91974847 4020833 432687..433388 1 NC_007958.1 winged helix family two component transcriptional regulator 433388 4020833 RPD_0367 Rhodopseudomonas palustris BisB5 winged helix family two component transcriptional regulator YP_567506.1 432687 D 316057 CDS YP_567507.1 91974848 4020834 433595..435286 1 NC_007958.1 periplasmic sensor signal transduction histidine kinase 435286 4020834 RPD_0368 Rhodopseudomonas palustris BisB5 periplasmic sensor signal transduction histidine kinase YP_567507.1 433595 D 316057 CDS YP_567508.1 91974849 4020835 435283..435744 1 NC_007958.1 HPr kinase 435744 4020835 RPD_0369 Rhodopseudomonas palustris BisB5 HPr kinase YP_567508.1 435283 D 316057 CDS YP_567509.1 91974850 4020836 435884..436342 1 NC_007958.1 PTS system fructose subfamily IIA component 436342 4020836 RPD_0370 Rhodopseudomonas palustris BisB5 PTS system fructose subfamily IIA component YP_567509.1 435884 D 316057 CDS YP_567510.1 91974851 4020837 436339..436674 1 NC_007958.1 phosphotransferase system, HPr 436674 4020837 RPD_0371 Rhodopseudomonas palustris BisB5 phosphotransferase system, HPr YP_567510.1 436339 D 316057 CDS YP_567511.1 91974852 4020838 complement(436731..438272) 1 NC_007958.1 hypothetical protein 438272 4020838 RPD_0372 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567511.1 436731 R 316057 CDS YP_567512.1 91974853 4020839 438293..440227 1 NC_007958.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 440227 4020839 RPD_0373 Rhodopseudomonas palustris BisB5 GTP-binding protein LepA YP_567512.1 438293 D 316057 CDS YP_567513.1 91974854 4020840 440240..440926 1 NC_007958.1 hypothetical protein 440926 4020840 RPD_0374 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567513.1 440240 D 316057 CDS YP_567514.1 91974855 4020841 441249..441485 1 NC_007958.1 hypothetical protein 441485 4020841 RPD_0375 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567514.1 441249 D 316057 CDS YP_567515.1 91974856 4020842 441476..441811 1 NC_007958.1 hypothetical protein 441811 4020842 RPD_0376 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567515.1 441476 D 316057 CDS YP_567516.1 91974857 4020843 441925..443745 1 NC_007958.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 443745 aceK 4020843 aceK Rhodopseudomonas palustris BisB5 bifunctional isocitrate dehydrogenase kinase/phosphatase protein YP_567516.1 441925 D 316057 CDS YP_567517.1 91974858 4020844 443977..444726 1 NC_007958.1 putative role in sulfur assimilation; CysZ-like protein 444726 4020844 RPD_0378 Rhodopseudomonas palustris BisB5 CysZ-like protein YP_567517.1 443977 D 316057 CDS YP_567518.1 91974859 4020845 445371..446354 1 NC_007958.1 alpha/beta hydrolase fold protein 446354 4020845 RPD_0379 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_567518.1 445371 D 316057 CDS YP_567519.1 91974860 4020846 446518..448239 1 NC_007958.1 peptidase S10, serine carboxypeptidase 448239 4020846 RPD_0380 Rhodopseudomonas palustris BisB5 peptidase S10, serine carboxypeptidase YP_567519.1 446518 D 316057 CDS YP_567520.1 91974861 4020847 complement(448307..449083) 1 NC_007958.1 endonuclease III 449083 4020847 RPD_0381 Rhodopseudomonas palustris BisB5 endonuclease III YP_567520.1 448307 R 316057 CDS YP_567521.1 91974862 4020848 449106..449621 1 NC_007958.1 hypothetical protein 449621 4020848 RPD_0382 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567521.1 449106 D 316057 CDS YP_567522.1 91974863 4020849 449638..450570 1 NC_007958.1 methylated-DNA--protein-cysteine methyltransferase 450570 4020849 RPD_0383 Rhodopseudomonas palustris BisB5 methylated-DNA--protein-cysteine methyltransferase YP_567522.1 449638 D 316057 CDS YP_567523.1 91974864 4020850 450661..452175 1 NC_007958.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 452175 4020850 RPD_0384 Rhodopseudomonas palustris BisB5 phosphoglyceromutase YP_567523.1 450661 D 316057 CDS YP_567524.1 91974865 4020851 complement(452216..453031) 1 NC_007958.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 453031 4020851 RPD_0385 Rhodopseudomonas palustris BisB5 dihydrodipicolinate reductase YP_567524.1 452216 R 316057 CDS YP_567525.1 91974866 4020852 complement(453124..453435) 1 NC_007958.1 hypothetical protein 453435 4020852 RPD_0386 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567525.1 453124 R 316057 CDS YP_567526.1 91974867 4020853 complement(453455..454162) 1 NC_007958.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 454162 4020853 RPD_0387 Rhodopseudomonas palustris BisB5 orotidine 5'-phosphate decarboxylase YP_567526.1 453455 R 316057 CDS YP_567527.1 91974868 4020854 complement(454169..454750) 1 NC_007958.1 NADPH-dependent FMN reductase 454750 4020854 RPD_0388 Rhodopseudomonas palustris BisB5 NADPH-dependent FMN reductase YP_567527.1 454169 R 316057 CDS YP_567528.1 91974869 4020855 complement(454899..455501) 1 NC_007958.1 putative phospholipid N-methyltransferase 455501 4020855 RPD_0389 Rhodopseudomonas palustris BisB5 putative phospholipid N-methyltransferase YP_567528.1 454899 R 316057 CDS YP_567529.1 91974870 4020856 complement(455595..456755) 1 NC_007958.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 456755 4020856 RPD_0390 Rhodopseudomonas palustris BisB5 chaperone protein DnaJ YP_567529.1 455595 R 316057 CDS YP_567530.1 91974871 4020857 complement(456864..458765) 1 NC_007958.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 458765 dnaK 4020857 dnaK Rhodopseudomonas palustris BisB5 molecular chaperone DnaK YP_567530.1 456864 R 316057 CDS YP_567531.1 91974872 4020858 459160..460104 1 NC_007958.1 hypothetical protein 460104 4020858 RPD_0392 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567531.1 459160 D 316057 CDS YP_567532.1 91974873 4020859 complement(460221..460841) 1 NC_007958.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 460841 4020859 RPD_0393 Rhodopseudomonas palustris BisB5 heat shock protein GrpE YP_567532.1 460221 R 316057 CDS YP_567533.1 91974874 4020860 complement(460941..462029) 1 NC_007958.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 462029 hrcA 4020860 hrcA Rhodopseudomonas palustris BisB5 heat-inducible transcription repressor YP_567533.1 460941 R 316057 CDS YP_567534.1 91974875 4020861 462181..462894 1 NC_007958.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 462894 rph 4020861 rph Rhodopseudomonas palustris BisB5 ribonuclease PH YP_567534.1 462181 D 316057 CDS YP_567535.1 91974876 4020862 462947..463579 1 NC_007958.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 463579 4020862 RPD_0396 Rhodopseudomonas palustris BisB5 putative deoxyribonucleotide triphosphate pyrophosphatase YP_567535.1 462947 D 316057 CDS YP_567536.1 91974877 4020863 463569..464726 1 NC_007958.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 464726 4020863 RPD_0397 Rhodopseudomonas palustris BisB5 coproporphyrinogen III oxidase YP_567536.1 463569 D 316057 CDS YP_567537.1 91974878 4020864 complement(464836..466035) 1 NC_007958.1 extracellular ligand-binding receptor 466035 4020864 RPD_0398 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_567537.1 464836 R 316057 CDS YP_567538.1 91974879 4020865 466232..467185 1 NC_007958.1 hypothetical protein 467185 4020865 RPD_0399 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567538.1 466232 D 316057 CDS YP_567539.1 91974880 4020866 467172..467567 1 NC_007958.1 hypothetical protein 467567 4020866 RPD_0400 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567539.1 467172 D 316057 CDS YP_567540.1 91974881 4020867 467651..468592 1 NC_007958.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 468592 4020867 RPD_0401 Rhodopseudomonas palustris BisB5 glutathione synthetase YP_567540.1 467651 D 316057 CDS YP_567541.1 91974882 4020868 468696..469424 1 NC_007958.1 regulatory protein LuxR 469424 4020868 RPD_0402 Rhodopseudomonas palustris BisB5 regulatory protein LuxR YP_567541.1 468696 D 316057 CDS YP_567542.1 91974883 4020869 469502..470158 1 NC_007958.1 autoinducer (acylhomoserine lactone) synthase 470158 4020869 RPD_0403 Rhodopseudomonas palustris BisB5 autoinducer (acylhomoserine lactone) synthase YP_567542.1 469502 D 316057 CDS YP_567543.1 91974884 4020870 470155..470379 1 NC_007958.1 hypothetical protein 470379 4020870 RPD_0404 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567543.1 470155 D 316057 CDS YP_567544.1 91974885 4020871 470489..472027 1 NC_007958.1 Mg chelatase-like protein 472027 4020871 RPD_0405 Rhodopseudomonas palustris BisB5 Mg chelatase-like protein YP_567544.1 470489 D 316057 CDS YP_567545.1 91974886 4020872 472132..472617 1 NC_007958.1 hypothetical protein 472617 4020872 RPD_0406 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567545.1 472132 D 316057 CDS YP_567546.1 91974887 4020873 472732..474684 1 NC_007958.1 ATPase-like ATP-binding protein 474684 4020873 RPD_0407 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_567546.1 472732 D 316057 CDS YP_567547.1 91974888 4020874 474891..475904 1 NC_007958.1 hypothetical protein 475904 4020874 RPD_0408 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567547.1 474891 D 316057 CDS YP_567548.1 91974889 4020875 complement(476038..476994) 1 NC_007958.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 476994 4020875 RPD_0409 Rhodopseudomonas palustris BisB5 pantothenate kinase YP_567548.1 476038 R 316057 CDS YP_567549.1 91974890 4020876 complement(477185..477508) 1 NC_007958.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 477508 hisE 4020876 hisE Rhodopseudomonas palustris BisB5 phosphoribosyl-ATP pyrophosphatase YP_567549.1 477185 R 316057 CDS YP_567550.1 91974891 4020877 complement(477564..478331) 1 NC_007958.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 478331 4020877 RPD_0411 Rhodopseudomonas palustris BisB5 imidazole glycerol phosphate synthase subunit HisF YP_567550.1 477564 R 316057 CDS YP_567551.1 91974892 4020878 complement(478339..479076) 1 NC_007958.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 479076 4020878 RPD_0412 Rhodopseudomonas palustris BisB5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_567551.1 478339 R 316057 CDS YP_567552.1 91974893 4020879 complement(479255..479905) 1 NC_007958.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 479905 hisH 4020879 hisH Rhodopseudomonas palustris BisB5 imidazole glycerol phosphate synthase subunit HisH YP_567552.1 479255 R 316057 CDS YP_567553.1 91974894 4020880 complement(479902..480420) 1 NC_007958.1 hypothetical protein 480420 4020880 RPD_0414 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567553.1 479902 R 316057 CDS YP_567554.1 91974895 4020881 complement(480449..481042) 1 NC_007958.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 481042 hisB 4020881 hisB Rhodopseudomonas palustris BisB5 imidazoleglycerol-phosphate dehydratase YP_567554.1 480449 R 316057 CDS YP_567555.1 91974896 4020882 481225..481806 1 NC_007958.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 481806 4020882 RPD_0416 Rhodopseudomonas palustris BisB5 ATP-dependent protease peptidase subunit YP_567555.1 481225 D 316057 CDS YP_567556.1 91974897 4020883 481803..482288 1 NC_007958.1 GCN5-like N-acetyltransferase 482288 4020883 RPD_0417 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_567556.1 481803 D 316057 CDS YP_567557.1 91974898 4020884 482285..483586 1 NC_007958.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 483586 hslU 4020884 hslU Rhodopseudomonas palustris BisB5 ATP-dependent protease ATP-binding subunit HslU YP_567557.1 482285 D 316057 CDS YP_567558.1 91974899 4020885 complement(483691..484287) 1 NC_007958.1 Smr protein/MutS2 484287 4020885 RPD_0419 Rhodopseudomonas palustris BisB5 Smr protein/MutS2 YP_567558.1 483691 R 316057 CDS YP_567559.1 91974900 4020886 complement(484290..485768) 1 NC_007958.1 MltA 485768 4020886 RPD_0420 Rhodopseudomonas palustris BisB5 MltA YP_567559.1 484290 R 316057 CDS YP_567560.1 91974901 4020887 complement(485824..486531) 1 NC_007958.1 import inner membrane translocase subunit Tim44 486531 4020887 RPD_0421 Rhodopseudomonas palustris BisB5 import inner membrane translocase subunit Tim44 YP_567560.1 485824 R 316057 CDS YP_567561.1 91974902 4020888 486979..487455 1 NC_007958.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 487455 4020888 RPD_0422 Rhodopseudomonas palustris BisB5 preprotein translocase subunit SecB YP_567561.1 486979 D 316057 CDS YP_567562.1 91974903 4020889 complement(487508..488203) 1 NC_007958.1 DNA polymerase III subunit epsilon 488203 4020889 RPD_0423 Rhodopseudomonas palustris BisB5 DNA polymerase III subunit epsilon YP_567562.1 487508 R 316057 CDS YP_567563.1 91974904 4020890 complement(488243..488842) 1 NC_007958.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 488842 coaE 4020890 coaE Rhodopseudomonas palustris BisB5 dephospho-CoA kinase YP_567563.1 488243 R 316057 CDS YP_567564.1 91974905 4020891 complement(488969..489577) 1 NC_007958.1 Maf-like protein 489577 4020891 RPD_0425 Rhodopseudomonas palustris BisB5 Maf-like protein YP_567564.1 488969 R 316057 CDS YP_567565.1 91974906 4020892 complement(489574..490413) 1 NC_007958.1 hypothetical protein 490413 4020892 RPD_0426 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567565.1 489574 R 316057 CDS YP_567566.1 91974907 4020893 490867..491307 1 NC_007958.1 hypothetical protein 491307 4020893 RPD_0427 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567566.1 490867 D 316057 CDS YP_567567.1 91974908 4020894 491591..492856 1 NC_007958.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 492856 rho 4020894 rho Rhodopseudomonas palustris BisB5 transcription termination factor Rho YP_567567.1 491591 D 316057 CDS YP_567568.1 91974909 4020895 492960..494348 1 NC_007958.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 494348 trmE 4020895 trmE Rhodopseudomonas palustris BisB5 tRNA modification GTPase TrmE YP_567568.1 492960 D 316057 CDS YP_567569.1 91974910 4020896 494578..496458 1 NC_007958.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 496458 4020896 RPD_0430 Rhodopseudomonas palustris BisB5 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_567569.1 494578 D 316057 CDS YP_567570.1 91974911 4020897 497049..497750 1 NC_007958.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 497750 gidB 4020897 gidB Rhodopseudomonas palustris BisB5 16S rRNA methyltransferase GidB YP_567570.1 497049 D 316057 CDS YP_567571.1 91974912 4020898 497747..498601 1 NC_007958.1 cobyrinic acid a,c-diamide synthase 498601 4020898 RPD_0432 Rhodopseudomonas palustris BisB5 cobyrinic acid a,c-diamide synthase YP_567571.1 497747 D 316057 CDS YP_567572.1 91974913 4020899 498870..499760 1 NC_007958.1 parB-like partition proteins 499760 4020899 RPD_0433 Rhodopseudomonas palustris BisB5 parB-like partition proteins YP_567572.1 498870 D 316057 CDS YP_567573.1 91974914 4020900 complement(500113..501141) 1 NC_007958.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 501141 holA 4020900 holA Rhodopseudomonas palustris BisB5 DNA polymerase III subunit delta YP_567573.1 500113 R 316057 CDS YP_567574.1 91974915 4020901 complement(501189..501749) 1 NC_007958.1 hypothetical protein 501749 4020901 RPD_0435 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567574.1 501189 R 316057 CDS YP_567575.1 91974916 4020902 complement(501736..504372) 1 NC_007958.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 504372 leuS 4020902 leuS Rhodopseudomonas palustris BisB5 leucyl-tRNA synthetase YP_567575.1 501736 R 316057 CDS YP_567576.1 91974917 4020903 complement(504585..506261) 1 NC_007958.1 GGDEF domain-containing protein 506261 4020903 RPD_0437 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_567576.1 504585 R 316057 CDS YP_567577.1 91974918 4020904 506433..507098 1 NC_007958.1 hypothetical protein 507098 4020904 RPD_0438 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567577.1 506433 D 316057 CDS YP_567578.1 91974919 4020905 complement(507145..507714) 1 NC_007958.1 hypothetical protein 507714 4020905 RPD_0439 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567578.1 507145 R 316057 CDS YP_567579.1 91974920 4020906 507883..508569 1 NC_007958.1 winged helix family two component transcriptional regulator 508569 4020906 RPD_0440 Rhodopseudomonas palustris BisB5 winged helix family two component transcriptional regulator YP_567579.1 507883 D 316057 CDS YP_567580.1 91974921 4020907 508696..509142 1 NC_007958.1 cyclic nucleotide-binding protein 509142 4020907 RPD_0441 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_567580.1 508696 D 316057 CDS YP_567581.1 91974922 4020908 complement(509393..510451) 1 NC_007958.1 exodeoxyribonuclease III 510451 4020908 RPD_0442 Rhodopseudomonas palustris BisB5 exodeoxyribonuclease III YP_567581.1 509393 R 316057 CDS YP_567582.1 91974923 4020909 complement(510508..511455) 1 NC_007958.1 outer membrane lipoprotein carrier protein LolA 511455 4020909 RPD_0443 Rhodopseudomonas palustris BisB5 outer membrane lipoprotein carrier protein LolA YP_567582.1 510508 R 316057 CDS YP_567583.1 91974924 4020910 complement(511473..513944) 1 NC_007958.1 cell divisionFtsK/SpoIIIE 513944 4020910 RPD_0444 Rhodopseudomonas palustris BisB5 cell divisionFtsK/SpoIIIE YP_567583.1 511473 R 316057 CDS YP_567584.1 91974925 4020911 complement(513953..515191) 1 NC_007958.1 class I and II aminotransferase 515191 4020911 RPD_0445 Rhodopseudomonas palustris BisB5 class I and II aminotransferase YP_567584.1 513953 R 316057 CDS YP_567585.1 91974926 4020912 515319..515588 1 NC_007958.1 transcriptional regulator AbrB 515588 4020912 RPD_0446 Rhodopseudomonas palustris BisB5 transcriptional regulator AbrB YP_567585.1 515319 D 316057 CDS YP_567586.1 91974927 4020913 515593..516000 1 NC_007958.1 PilT protein-like protein 516000 4020913 RPD_0447 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_567586.1 515593 D 316057 CDS YP_567587.1 91974928 4020914 complement(516232..517674) 1 NC_007958.1 ammonium transporter 517674 4020914 RPD_0448 Rhodopseudomonas palustris BisB5 ammonium transporter YP_567587.1 516232 R 316057 CDS YP_567588.1 91974929 4020915 complement(517715..518053) 1 NC_007958.1 nitrogen regulatory protein P-II 518053 4020915 RPD_0449 Rhodopseudomonas palustris BisB5 nitrogen regulatory protein P-II YP_567588.1 517715 R 316057 CDS YP_567589.1 91974930 4020916 complement(518377..518691) 1 NC_007958.1 hypothetical protein 518691 4020916 RPD_0450 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567589.1 518377 R 316057 CDS YP_567590.1 91974931 4020917 complement(519000..519338) 1 NC_007958.1 nitrogen regulatory protein P-II 519338 4020917 RPD_0451 Rhodopseudomonas palustris BisB5 nitrogen regulatory protein P-II YP_567590.1 519000 R 316057 CDS YP_567591.1 91974932 4020918 complement(519615..520496) 1 NC_007958.1 acyl-CoA thioesterase II 520496 4020918 RPD_0452 Rhodopseudomonas palustris BisB5 acyl-CoA thioesterase II YP_567591.1 519615 R 316057 CDS YP_567592.1 91974933 4020919 520635..521954 1 NC_007958.1 2-octaprenyl-6-methoxyphenyl hydroxylase 521954 4020919 RPD_0453 Rhodopseudomonas palustris BisB5 2-octaprenyl-6-methoxyphenyl hydroxylase YP_567592.1 520635 D 316057 CDS YP_567593.1 91974934 4020920 complement(522175..522372) 1 NC_007958.1 hypothetical protein 522372 4020920 RPD_0454 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567593.1 522175 R 316057 CDS YP_567594.1 91974935 4020921 complement(522466..523140) 1 NC_007958.1 peptidase S16, lon-like 523140 4020921 RPD_0455 Rhodopseudomonas palustris BisB5 peptidase S16, lon-like YP_567594.1 522466 R 316057 CDS YP_567595.1 91974936 4020922 complement(523270..524190) 1 NC_007958.1 thioredoxin 524190 4020922 RPD_0456 Rhodopseudomonas palustris BisB5 thioredoxin YP_567595.1 523270 R 316057 CDS YP_567596.1 91974937 4020924 complement(524645..525583) 1 NC_007958.1 LysR, substrate-binding 525583 4020924 RPD_0457 Rhodopseudomonas palustris BisB5 LysR, substrate-binding YP_567596.1 524645 R 316057 CDS YP_567597.1 91974938 4020925 525665..526414 1 NC_007958.1 hypothetical protein 526414 4020925 RPD_0458 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567597.1 525665 D 316057 CDS YP_567598.1 91974939 4020926 complement(526524..527306) 1 NC_007958.1 histidine kinase, HAMP region 527306 4020926 RPD_0459 Rhodopseudomonas palustris BisB5 histidine kinase, HAMP region YP_567598.1 526524 R 316057 CDS YP_567599.1 91974940 4020927 528003..528995 1 NC_007958.1 AppA/PpaA family photosynthesis gene regulator 528995 4020927 RPD_0460 Rhodopseudomonas palustris BisB5 AppA/PpaA family photosynthesis gene regulator YP_567599.1 528003 D 316057 CDS YP_567600.1 91974941 4020928 529350..530435 1 NC_007958.1 hypothetical protein 530435 4020928 RPD_0461 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567600.1 529350 D 316057 CDS YP_567601.1 91974942 4020929 complement(530582..531880) 1 NC_007958.1 RuBisCO-like protein 531880 4020929 RPD_0462 Rhodopseudomonas palustris BisB5 RuBisCO-like protein YP_567601.1 530582 R 316057 CDS YP_567602.1 91974943 4020930 complement(532026..532454) 1 NC_007958.1 hypothetical protein 532454 4020930 RPD_0463 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567602.1 532026 R 316057 CDS YP_567603.1 91974944 4020931 532736..534718 1 NC_007958.1 acyltransferase 3 534718 4020931 RPD_0464 Rhodopseudomonas palustris BisB5 acyltransferase 3 YP_567603.1 532736 D 316057 CDS YP_567604.1 91974945 4020932 complement(534811..535989) 1 NC_007958.1 alginate o-acetyltransferase AlgJ 535989 4020932 RPD_0465 Rhodopseudomonas palustris BisB5 alginate o-acetyltransferase AlgJ YP_567604.1 534811 R 316057 CDS YP_567605.1 91974946 4020933 complement(535992..537404) 1 NC_007958.1 membrane bound O-acyl transferase, MBOAT 537404 4020933 RPD_0466 Rhodopseudomonas palustris BisB5 membrane bound O-acyl transferase, MBOAT YP_567605.1 535992 R 316057 CDS YP_567606.1 91974947 4020935 complement(537900..539666) 1 NC_007958.1 HemY-like 539666 4020935 RPD_0467 Rhodopseudomonas palustris BisB5 HemY-like YP_567606.1 537900 R 316057 CDS YP_567607.1 91974948 4020936 complement(539674..541113) 1 NC_007958.1 hypothetical protein 541113 4020936 RPD_0468 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567607.1 539674 R 316057 CDS YP_567608.1 91974949 4020937 complement(541174..541917) 1 NC_007958.1 uroporphyrinogen III synthase HEM4 541917 4020937 RPD_0469 Rhodopseudomonas palustris BisB5 uroporphyrinogen III synthase HEM4 YP_567608.1 541174 R 316057 CDS YP_567609.1 91974950 4020938 542016..543185 1 NC_007958.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 543185 4020938 RPD_0470 Rhodopseudomonas palustris BisB5 putative DNA-binding/iron metalloprotein/AP endonuclease YP_567609.1 542016 D 316057 CDS YP_567610.1 91974951 4020939 543222..544211 1 NC_007958.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 544211 gpsA 4020939 gpsA Rhodopseudomonas palustris BisB5 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_567610.1 543222 D 316057 CDS YP_567611.1 91974952 4020940 544215..544628 1 NC_007958.1 hypothetical protein 544628 4020940 RPD_0472 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567611.1 544215 D 316057 CDS YP_567612.1 91974953 4020941 544799..545476 1 NC_007958.1 hypothetical protein 545476 4020941 RPD_0473 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567612.1 544799 D 316057 CDS YP_567613.1 91974954 4020942 545958..547910 1 NC_007958.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 547910 4020942 RPD_0474 Rhodopseudomonas palustris BisB5 acetyl-CoA synthetase YP_567613.1 545958 D 316057 CDS YP_567614.1 91974955 4020943 548292..548819 1 NC_007958.1 hypothetical protein 548819 4020943 RPD_0475 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567614.1 548292 D 316057 CDS YP_567615.1 91974956 4020944 complement(548928..551021) 1 NC_007958.1 OmpA/MotB 551021 4020944 RPD_0476 Rhodopseudomonas palustris BisB5 OmpA/MotB YP_567615.1 548928 R 316057 CDS YP_567616.1 91974957 4020945 complement(551564..552052) 1 NC_007958.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 552052 4020945 RPD_0477 Rhodopseudomonas palustris BisB5 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_567616.1 551564 R 316057 CDS YP_567617.1 91974958 4020946 complement(552188..552970) 1 NC_007958.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 552970 sdhB 4020946 sdhB Rhodopseudomonas palustris BisB5 succinate dehydrogenase iron-sulfur subunit YP_567617.1 552188 R 316057 CDS YP_567618.1 91974959 4020947 complement(553099..554922) 1 NC_007958.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 554922 sdhA 4020947 sdhA Rhodopseudomonas palustris BisB5 succinate dehydrogenase flavoprotein subunit YP_567618.1 553099 R 316057 CDS YP_567619.1 91974960 4020948 complement(554926..555348) 1 NC_007958.1 succinate dehydrogenase, cytochrome b subunit 555348 4020948 RPD_0480 Rhodopseudomonas palustris BisB5 succinate dehydrogenase, cytochrome b subunit YP_567619.1 554926 R 316057 CDS YP_567620.1 91974961 4020949 complement(555345..555734) 1 NC_007958.1 succinate dehydrogenase, cytochrome b subunit 555734 4020949 RPD_0481 Rhodopseudomonas palustris BisB5 succinate dehydrogenase, cytochrome b subunit YP_567620.1 555345 R 316057 CDS YP_567621.1 91974962 4020950 555966..557084 1 NC_007958.1 cation diffusion facilitator family transporter 557084 4020950 RPD_0482 Rhodopseudomonas palustris BisB5 cation diffusion facilitator family transporter YP_567621.1 555966 D 316057 CDS YP_567622.1 91974963 4020951 complement(557384..558895) 1 NC_007958.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 558895 4020951 RPD_0483 Rhodopseudomonas palustris BisB5 malonyl-CoA synthase YP_567622.1 557384 R 316057 CDS YP_567623.1 91974964 4020952 558984..559733 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 559733 4020952 RPD_0484 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_567623.1 558984 D 316057 CDS YP_567624.1 91974965 4020953 560248..560832 1 NC_007958.1 beta-Ig-H3/fasciclin 560832 4020953 RPD_0485 Rhodopseudomonas palustris BisB5 beta-Ig-H3/fasciclin YP_567624.1 560248 D 316057 CDS YP_567625.1 91974966 4020954 561057..561701 1 NC_007958.1 hypothetical protein 561701 4020954 RPD_0486 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567625.1 561057 D 316057 CDS YP_567626.1 91974967 4020955 561704..562483 1 NC_007958.1 twin-arginine translocation pathway signal 562483 4020955 RPD_0487 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_567626.1 561704 D 316057 CDS YP_567627.1 91974968 4020956 562633..563151 1 NC_007958.1 superoxide dismutase, copper/zinc binding 563151 4020956 RPD_0488 Rhodopseudomonas palustris BisB5 superoxide dismutase, copper/zinc binding YP_567627.1 562633 D 316057 CDS YP_567628.1 91974969 4020957 complement(563283..564467) 1 NC_007958.1 major facilitator transporter 564467 4020957 RPD_0489 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_567628.1 563283 R 316057 CDS YP_567629.1 91974970 4020958 564693..565805 1 NC_007958.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 565805 4020958 RPD_0490 Rhodopseudomonas palustris BisB5 3-isopropylmalate dehydrogenase YP_567629.1 564693 D 316057 CDS YP_567630.1 91974971 4020959 complement(565977..566357) 1 NC_007958.1 hypothetical protein 566357 4020959 RPD_0491 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567630.1 565977 R 316057 CDS YP_567631.1 91974972 4020960 complement(566522..567340) 1 NC_007958.1 hypothetical protein 567340 4020960 RPD_0492 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567631.1 566522 R 316057 CDS YP_567632.1 91974973 4020961 567499..568533 1 NC_007958.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 568533 4020961 RPD_0493 Rhodopseudomonas palustris BisB5 aspartate-semialdehyde dehydrogenase YP_567632.1 567499 D 316057 CDS YP_567633.1 91974974 4020962 568675..569241 1 NC_007958.1 hypothetical protein 569241 4020962 RPD_0494 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567633.1 568675 D 316057 CDS YP_567634.1 91974975 4020963 complement(569490..570134) 1 NC_007958.1 carbonate dehydratase 570134 4020963 RPD_0495 Rhodopseudomonas palustris BisB5 carbonate dehydratase YP_567634.1 569490 R 316057 CDS YP_567635.1 91974976 4020964 570335..571213 1 NC_007958.1 Citryl-CoA lyase 571213 4020964 RPD_0496 Rhodopseudomonas palustris BisB5 Citryl-CoA lyase YP_567635.1 570335 D 316057 CDS YP_567636.1 91974977 4020965 complement(571384..573117) 1 NC_007958.1 chemotaxis sensory transducer 573117 4020965 RPD_0497 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_567636.1 571384 R 316057 CDS YP_567637.1 91974978 4020966 complement(573397..574002) 1 NC_007958.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 574002 leuD 4020966 leuD Rhodopseudomonas palustris BisB5 isopropylmalate isomerase small subunit YP_567637.1 573397 R 316057 CDS YP_567638.1 91974979 4020967 complement(574093..574494) 1 NC_007958.1 hypothetical protein 574494 4020967 RPD_0499 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567638.1 574093 R 316057 CDS YP_567639.1 91974980 4020968 574610..574948 1 NC_007958.1 hypothetical protein 574948 4020968 RPD_0500 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567639.1 574610 D 316057 CDS YP_567640.1 91974981 4020969 575449..575742 1 NC_007958.1 hypothetical protein 575742 4020969 RPD_0501 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567640.1 575449 D 316057 CDS YP_567641.1 91974982 4020970 575878..576198 1 NC_007958.1 hypothetical protein 576198 4020970 RPD_0502 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567641.1 575878 D 316057 CDS YP_567642.1 91974983 4020971 576327..577028 1 NC_007958.1 hypothetical protein 577028 4020971 RPD_0503 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567642.1 576327 D 316057 CDS YP_567643.1 91974984 4020972 complement(577127..578539) 1 NC_007958.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 578539 4020972 RPD_0504 Rhodopseudomonas palustris BisB5 isopropylmalate isomerase large subunit YP_567643.1 577127 R 316057 CDS YP_567644.1 91974985 4020973 complement(578747..579016) 1 NC_007958.1 hypothetical protein 579016 4020973 RPD_0505 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567644.1 578747 R 316057 CDS YP_567645.1 91974986 4020974 complement(579034..579429) 1 NC_007958.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 579429 rplS 4020974 rplS Rhodopseudomonas palustris BisB5 50S ribosomal protein L19 YP_567645.1 579034 R 316057 CDS YP_567646.1 91974987 4020975 complement(579543..580361) 1 NC_007958.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 580361 trmD 4020975 trmD Rhodopseudomonas palustris BisB5 tRNA (guanine-N(1)-)-methyltransferase YP_567646.1 579543 R 316057 CDS YP_567647.1 91974988 4020976 complement(580553..581083) 1 NC_007958.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 581083 rimM 4020976 rimM Rhodopseudomonas palustris BisB5 16S rRNA-processing protein RimM YP_567647.1 580553 R 316057 CDS YP_567648.1 91974989 4020977 complement(581096..581419) 1 NC_007958.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 581419 rpsP 4020977 rpsP Rhodopseudomonas palustris BisB5 30S ribosomal protein S16 YP_567648.1 581096 R 316057 CDS YP_567649.1 91974990 4020978 complement(581581..583134) 1 NC_007958.1 signal recognition particle protein 583134 4020978 RPD_0510 Rhodopseudomonas palustris BisB5 signal recognition particle protein YP_567649.1 581581 R 316057 CDS YP_567650.1 91974991 4020979 583492..584466 1 NC_007958.1 beta-lactamase-like protein 584466 4020979 RPD_0511 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_567650.1 583492 D 316057 CDS YP_567651.1 91974992 4020980 complement(584490..585215) 1 NC_007958.1 hypothetical protein 585215 4020980 RPD_0512 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567651.1 584490 R 316057 CDS YP_567652.1 91974993 4020981 complement(585212..586018) 1 NC_007958.1 transcription activator, effector binding 586018 4020981 RPD_0513 Rhodopseudomonas palustris BisB5 transcription activator, effector binding YP_567652.1 585212 R 316057 CDS YP_567653.1 91974994 4020982 586253..587134 1 NC_007958.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 587134 dapF 4020982 dapF Rhodopseudomonas palustris BisB5 diaminopimelate epimerase YP_567653.1 586253 D 316057 CDS YP_567654.1 91974995 4020983 587134..588465 1 NC_007958.1 MiaB-like tRNA modifying protein 588465 4020983 RPD_0515 Rhodopseudomonas palustris BisB5 MiaB-like tRNA modifying protein YP_567654.1 587134 D 316057 CDS YP_567655.1 91974996 4020984 complement(588401..589297) 1 NC_007958.1 pseudouridine synthase 589297 4020984 RPD_0516 Rhodopseudomonas palustris BisB5 pseudouridine synthase YP_567655.1 588401 R 316057 CDS YP_567656.1 91974997 4020985 589326..590273 1 NC_007958.1 signal recognition particle-docking protein FtsY 590273 4020985 RPD_0517 Rhodopseudomonas palustris BisB5 signal recognition particle-docking protein FtsY YP_567656.1 589326 D 316057 CDS YP_567657.1 91974998 4020986 590270..590902 1 NC_007958.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 590902 4020986 RPD_0518 Rhodopseudomonas palustris BisB5 intracellular septation protein A YP_567657.1 590270 D 316057 CDS YP_567658.1 91974999 4020987 complement(591159..591551) 1 NC_007958.1 hypothetical protein 591551 4020987 RPD_0519 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567658.1 591159 R 316057 CDS YP_567659.1 91975000 4020988 complement(591670..592269) 1 NC_007958.1 periplasmic protein thiol 592269 4020988 RPD_0520 Rhodopseudomonas palustris BisB5 periplasmic protein thiol YP_567659.1 591670 R 316057 CDS YP_567660.1 91975001 4020989 complement(592266..592445) 1 NC_007958.1 heme exporter protein CcmD 592445 4020989 RPD_0521 Rhodopseudomonas palustris BisB5 heme exporter protein CcmD YP_567660.1 592266 R 316057 CDS YP_567661.1 91975002 4020990 complement(592442..593176) 1 NC_007958.1 heme exporter protein CcmC 593176 4020990 RPD_0522 Rhodopseudomonas palustris BisB5 heme exporter protein CcmC YP_567661.1 592442 R 316057 CDS YP_567662.1 91975003 4020991 complement(593368..594036) 1 NC_007958.1 heme exporter protein CcmB 594036 4020991 RPD_0523 Rhodopseudomonas palustris BisB5 heme exporter protein CcmB YP_567662.1 593368 R 316057 CDS YP_567663.1 91975004 4020992 complement(594086..594688) 1 NC_007958.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 594688 4020992 RPD_0524 Rhodopseudomonas palustris BisB5 cytochrome c biogenesis protein CcmA YP_567663.1 594086 R 316057 CDS YP_567664.1 91975005 4020993 594905..597622 1 NC_007958.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 597622 4020993 RPD_0525 Rhodopseudomonas palustris BisB5 aconitate hydratase YP_567664.1 594905 D 316057 CDS YP_567665.1 91975006 4020994 597793..598629 1 NC_007958.1 hypothetical protein 598629 4020994 RPD_0526 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567665.1 597793 D 316057 CDS YP_567666.1 91975007 4020995 598989..599357 1 NC_007958.1 hypothetical protein 599357 4020995 RPD_0527 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567666.1 598989 D 316057 CDS YP_567667.1 91975008 4020996 complement(599552..600097) 1 NC_007958.1 GCN5-like N-acetyltransferase 600097 4020996 RPD_0528 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_567667.1 599552 R 316057 CDS YP_567668.1 91975009 4020997 complement(600372..601163) 1 NC_007958.1 hypothetical protein 601163 4020997 RPD_0529 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567668.1 600372 R 316057 CDS YP_567669.1 91975010 4020998 complement(601496..604090) 1 NC_007958.1 hypothetical protein 604090 4020998 RPD_0530 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567669.1 601496 R 316057 CDS YP_567670.1 91975011 4020999 complement(604094..604834) 1 NC_007958.1 ABC transporter-like protein 604834 4020999 RPD_0531 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567670.1 604094 R 316057 CDS YP_567671.1 91975012 4021000 604899..605534 1 NC_007958.1 G-D-S-L lipolytic protein 605534 4021000 RPD_0532 Rhodopseudomonas palustris BisB5 G-D-S-L lipolytic protein YP_567671.1 604899 D 316057 CDS YP_567672.1 91975013 4021001 605725..606261 1 NC_007958.1 2',5' RNA ligase 606261 4021001 RPD_0533 Rhodopseudomonas palustris BisB5 2',5' RNA ligase YP_567672.1 605725 D 316057 CDS YP_567673.1 91975014 4021002 606344..607525 1 NC_007958.1 AFG1-like ATPase 607525 4021002 RPD_0534 Rhodopseudomonas palustris BisB5 AFG1-like ATPase YP_567673.1 606344 D 316057 CDS YP_567674.1 91975015 4021003 607655..608623 1 NC_007958.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 608623 4021003 RPD_0535 Rhodopseudomonas palustris BisB5 malate dehydrogenase YP_567674.1 607655 D 316057 CDS YP_567675.1 91975016 4021004 608713..609912 1 NC_007958.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 609912 sucC 4021004 sucC Rhodopseudomonas palustris BisB5 succinyl-CoA synthetase subunit beta YP_567675.1 608713 D 316057 CDS YP_567676.1 91975017 4021005 609963..610196 1 NC_007958.1 CopG-like DNA-binding 610196 4021005 RPD_0537 Rhodopseudomonas palustris BisB5 CopG-like DNA-binding YP_567676.1 609963 D 316057 CDS YP_567677.1 91975018 4021006 610186..610605 1 NC_007958.1 PilT protein-like protein 610605 4021006 RPD_0538 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_567677.1 610186 D 316057 CDS YP_567678.1 91975019 4021007 610618..611502 1 NC_007958.1 succinyl-CoA synthetase subunit alpha 611502 4021007 RPD_0539 Rhodopseudomonas palustris BisB5 succinyl-CoA synthetase subunit alpha YP_567678.1 610618 D 316057 CDS YP_567679.1 91975020 4021008 611893..612579 1 NC_007958.1 GCN5-like N-acetyltransferase 612579 4021008 RPD_0540 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_567679.1 611893 D 316057 CDS YP_567680.1 91975021 4021009 complement(612634..613737) 1 NC_007958.1 hypothetical protein 613737 4021009 RPD_0541 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567680.1 612634 R 316057 CDS YP_567681.1 91975022 4021010 613913..614425 1 NC_007958.1 regulatory protein MarR 614425 4021010 RPD_0542 Rhodopseudomonas palustris BisB5 regulatory protein MarR YP_567681.1 613913 D 316057 CDS YP_567682.1 91975023 4021011 614527..615342 1 NC_007958.1 hypothetical protein 615342 4021011 RPD_0543 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567682.1 614527 D 316057 CDS YP_567683.1 91975024 4021012 615785..618742 1 NC_007958.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 618742 sucA 4021012 sucA Rhodopseudomonas palustris BisB5 2-oxoglutarate dehydrogenase E1 component YP_567683.1 615785 D 316057 CDS YP_567684.1 91975025 4021013 618849..620150 1 NC_007958.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 620150 4021013 RPD_0545 Rhodopseudomonas palustris BisB5 dihydrolipoamide succinyltransferase YP_567684.1 618849 D 316057 CDS YP_567685.1 91975026 4021014 620210..620611 1 NC_007958.1 hypothetical protein 620611 4021014 RPD_0546 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567685.1 620210 D 316057 CDS YP_567686.1 91975027 4021015 620619..621365 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 621365 4021015 RPD_0547 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_567686.1 620619 D 316057 CDS YP_567687.1 91975028 4021016 621392..621646 1 NC_007958.1 hypothetical protein 621646 4021016 RPD_0548 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567687.1 621392 D 316057 CDS YP_567688.1 91975029 4021017 621639..621929 1 NC_007958.1 hypothetical protein 621929 4021017 RPD_0549 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567688.1 621639 D 316057 CDS YP_567689.1 91975030 4021018 621944..623347 1 NC_007958.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 623347 4021018 RPD_0550 Rhodopseudomonas palustris BisB5 dihydrolipoamide dehydrogenase YP_567689.1 621944 D 316057 CDS YP_567690.1 91975031 4021019 623344..623925 1 NC_007958.1 hypothetical protein 623925 4021019 RPD_0551 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567690.1 623344 D 316057 CDS YP_567691.1 91975032 4021020 complement(624018..624608) 1 NC_007958.1 hypothetical protein 624608 4021020 RPD_0552 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567691.1 624018 R 316057 CDS YP_567692.1 91975033 4021021 complement(624737..625726) 1 NC_007958.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 625726 xerC 4021021 xerC Rhodopseudomonas palustris BisB5 site-specific tyrosine recombinase XerC YP_567692.1 624737 R 316057 CDS YP_567693.1 91975034 4021022 625901..628108 1 NC_007958.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 628108 4021022 RPD_0554 Rhodopseudomonas palustris BisB5 primosome assembly protein PriA YP_567693.1 625901 D 316057 CDS YP_567694.1 91975035 4021023 complement(628269..628748) 1 NC_007958.1 rare lipoprotein A 628748 4021023 RPD_0555 Rhodopseudomonas palustris BisB5 rare lipoprotein A YP_567694.1 628269 R 316057 CDS YP_567695.1 91975036 4021024 629384..629944 1 NC_007958.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 629944 4021024 RPD_0556 Rhodopseudomonas palustris BisB5 F0F1 ATP synthase subunit delta YP_567695.1 629384 D 316057 CDS YP_567696.1 91975037 4021025 629944..631476 1 NC_007958.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 631476 4021025 RPD_0557 Rhodopseudomonas palustris BisB5 F0F1 ATP synthase subunit alpha YP_567696.1 629944 D 316057 CDS YP_567697.1 91975038 4021026 631618..632493 1 NC_007958.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 632493 4021026 RPD_0558 Rhodopseudomonas palustris BisB5 F0F1 ATP synthase subunit gamma YP_567697.1 631618 D 316057 CDS YP_567698.1 91975039 4021027 632564..633994 1 NC_007958.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 633994 4021027 RPD_0559 Rhodopseudomonas palustris BisB5 F0F1 ATP synthase subunit beta YP_567698.1 632564 D 316057 CDS YP_567699.1 91975040 4021028 634081..634536 1 NC_007958.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 634536 atpC 4021028 atpC Rhodopseudomonas palustris BisB5 F0F1 ATP synthase subunit epsilon YP_567699.1 634081 D 316057 CDS YP_567700.1 91975041 4021029 complement(634798..635307) 1 NC_007958.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 635307 4021029 RPD_0561 Rhodopseudomonas palustris BisB5 dinucleoside polyphosphate hydrolase YP_567700.1 634798 R 316057 CDS YP_567701.1 91975042 4021030 complement(635304..636251) 1 NC_007958.1 NAD-dependent epimerase/dehydratase 636251 4021030 RPD_0562 Rhodopseudomonas palustris BisB5 NAD-dependent epimerase/dehydratase YP_567701.1 635304 R 316057 CDS YP_567702.1 91975043 4021031 636526..637596 1 NC_007958.1 hypothetical protein 637596 4021031 RPD_0563 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567702.1 636526 D 316057 CDS YP_567703.1 91975044 4021032 complement(637751..638254) 1 NC_007958.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 638254 4021032 RPD_0564 Rhodopseudomonas palustris BisB5 dinucleoside polyphosphate hydrolase YP_567703.1 637751 R 316057 CDS YP_567704.1 91975045 4021033 complement(638389..639624) 1 NC_007958.1 hypothetical protein 639624 4021033 RPD_0565 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567704.1 638389 R 316057 CDS YP_567705.1 91975046 4021034 complement(639784..641154) 1 NC_007958.1 carboxyl-terminal protease 641154 4021034 RPD_0566 Rhodopseudomonas palustris BisB5 carboxyl-terminal protease YP_567705.1 639784 R 316057 CDS YP_567706.1 91975047 4021035 complement(641151..642566) 1 NC_007958.1 peptidase M23B 642566 4021035 RPD_0567 Rhodopseudomonas palustris BisB5 peptidase M23B YP_567706.1 641151 R 316057 CDS YP_567707.1 91975048 4021036 complement(642586..643143) 1 NC_007958.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 643143 4021036 RPD_0568 Rhodopseudomonas palustris BisB5 rRNA large subunit methyltransferase YP_567707.1 642586 R 316057 CDS YP_567708.1 91975049 4021037 complement(643190..643822) 1 NC_007958.1 Iojap-like protein 643822 4021037 RPD_0569 Rhodopseudomonas palustris BisB5 Iojap-like protein YP_567708.1 643190 R 316057 CDS YP_567709.1 91975050 4021038 complement(644041..644670) 1 NC_007958.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 644670 nadD 4021038 nadD Rhodopseudomonas palustris BisB5 nicotinic acid mononucleotide adenylyltransferase YP_567709.1 644041 R 316057 CDS YP_567710.1 91975051 4021039 complement(644701..645993) 1 NC_007958.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 645993 proA 4021039 proA Rhodopseudomonas palustris BisB5 gamma-glutamyl phosphate reductase YP_567710.1 644701 R 316057 CDS YP_567711.1 91975052 4021040 646116..646400 1 NC_007958.1 hypothetical protein 646400 4021040 RPD_0572 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567711.1 646116 D 316057 CDS YP_567712.1 91975053 4021041 646390..646689 1 NC_007958.1 plasmid stabilization system protein 646689 4021041 RPD_0573 Rhodopseudomonas palustris BisB5 plasmid stabilization system protein YP_567712.1 646390 D 316057 CDS YP_567713.1 91975054 4021042 complement(646692..647822) 1 NC_007958.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 647822 4021042 RPD_0574 Rhodopseudomonas palustris BisB5 gamma-glutamyl kinase YP_567713.1 646692 R 316057 CDS YP_567714.1 91975055 4021043 648321..649289 1 NC_007958.1 Acyl-CoA dehydrogenase 649289 4021043 RPD_0575 Rhodopseudomonas palustris BisB5 Acyl-CoA dehydrogenase YP_567714.1 648321 D 316057 CDS YP_567715.1 91975056 4021044 649290..650075 1 NC_007958.1 LmbE-like protein 650075 4021044 RPD_0576 Rhodopseudomonas palustris BisB5 LmbE-like protein YP_567715.1 649290 D 316057 CDS YP_567716.1 91975057 4021045 650029..650607 1 NC_007958.1 type 12 methyltransferase 650607 4021045 RPD_0577 Rhodopseudomonas palustris BisB5 type 12 methyltransferase YP_567716.1 650029 D 316057 CDS YP_567717.1 91975058 4021046 complement(650456..651715) 1 NC_007958.1 glycosyl transferase family protein 651715 4021046 RPD_0578 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_567717.1 650456 R 316057 CDS YP_567718.1 91975059 4021047 complement(651830..652654) 1 NC_007958.1 exodeoxyribonuclease III (xth) 652654 4021047 RPD_0579 Rhodopseudomonas palustris BisB5 exodeoxyribonuclease III (xth) YP_567718.1 651830 R 316057 CDS YP_567719.1 91975060 4021048 complement(652934..653887) 1 NC_007958.1 MaoC-like dehydratase 653887 4021048 RPD_0580 Rhodopseudomonas palustris BisB5 MaoC-like dehydratase YP_567719.1 652934 R 316057 CDS YP_567720.1 91975061 4021049 complement(653893..655473) 1 NC_007958.1 AMP-dependent synthetase and ligase 655473 4021049 RPD_0581 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_567720.1 653893 R 316057 CDS YP_567721.1 91975062 4021050 complement(655470..656693) 1 NC_007958.1 ABC-type branched-chain amino acid transport systems, periplasmic component 656693 4021050 RPD_0582 Rhodopseudomonas palustris BisB5 ABC-type branched-chain amino acid transport systems, periplasmic component YP_567721.1 655470 R 316057 CDS YP_567722.1 91975063 4021051 656829..657422 1 NC_007958.1 regulatory protein TetR 657422 4021051 RPD_0583 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_567722.1 656829 D 316057 CDS YP_567723.1 91975064 4021052 complement(657601..658662) 1 NC_007958.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 658662 obgE 4021052 obgE Rhodopseudomonas palustris BisB5 GTPase ObgE YP_567723.1 657601 R 316057 CDS YP_567724.1 91975065 4021053 658841..659761 1 NC_007958.1 hypothetical protein 659761 4021053 RPD_0585 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567724.1 658841 D 316057 CDS YP_567725.1 91975066 4021054 complement(660063..660239) 1 NC_007958.1 hypothetical protein 660239 4021054 RPD_0586 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567725.1 660063 R 316057 CDS YP_567726.1 91975067 4021055 complement(660440..661039) 1 NC_007958.1 GCN5-like N-acetyltransferase 661039 4021055 RPD_0587 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_567726.1 660440 R 316057 CDS YP_567727.1 91975068 4021056 complement(661176..661448) 1 NC_007958.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 661448 rpmA 4021056 rpmA Rhodopseudomonas palustris BisB5 50S ribosomal protein L27 YP_567727.1 661176 R 316057 CDS YP_567728.1 91975069 4021057 complement(661530..661916) 1 NC_007958.1 50S ribosomal protein L21 661916 rplU 4021057 rplU Rhodopseudomonas palustris BisB5 50S ribosomal protein L21 YP_567728.1 661530 R 316057 CDS YP_567729.1 91975070 4021058 662255..663403 1 NC_007958.1 hypothetical protein 663403 4021058 RPD_0590 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567729.1 662255 D 316057 CDS YP_567730.1 91975071 4021060 664209..669098 1 NC_007958.1 DNA helicase 669098 4021060 RPD_0591 Rhodopseudomonas palustris BisB5 DNA helicase YP_567730.1 664209 D 316057 CDS YP_567731.1 91975072 4021061 complement(669310..670140) 1 NC_007958.1 aspartate/glutamate/uridylate kinase 670140 4021061 RPD_0592 Rhodopseudomonas palustris BisB5 aspartate/glutamate/uridylate kinase YP_567731.1 669310 R 316057 CDS YP_567732.1 91975073 4021062 complement(670154..671014) 1 NC_007958.1 aspartate/glutamate/uridylate kinase 671014 4021062 RPD_0593 Rhodopseudomonas palustris BisB5 aspartate/glutamate/uridylate kinase YP_567732.1 670154 R 316057 CDS YP_567733.1 91975074 4021063 complement(671337..672662) 1 NC_007958.1 general substrate transporter 672662 4021063 RPD_0594 Rhodopseudomonas palustris BisB5 general substrate transporter YP_567733.1 671337 R 316057 CDS YP_567734.1 91975075 4021064 672843..674000 1 NC_007958.1 ubiquinol oxidase subunit II 674000 4021064 RPD_0595 Rhodopseudomonas palustris BisB5 ubiquinol oxidase subunit II YP_567734.1 672843 D 316057 CDS YP_567735.1 91975076 4021065 674009..676018 1 NC_007958.1 cytochrome-c oxidase 676018 4021065 RPD_0596 Rhodopseudomonas palustris BisB5 cytochrome-c oxidase YP_567735.1 674009 D 316057 CDS YP_567736.1 91975077 4021066 676015..676644 1 NC_007958.1 cytochrome c oxidase subunit III 676644 4021066 RPD_0597 Rhodopseudomonas palustris BisB5 cytochrome c oxidase subunit III YP_567736.1 676015 D 316057 CDS YP_567737.1 91975078 4021067 676641..677033 1 NC_007958.1 cytochrome C oxidase subunit IV 677033 4021067 RPD_0598 Rhodopseudomonas palustris BisB5 cytochrome C oxidase subunit IV YP_567737.1 676641 D 316057 CDS YP_567738.1 91975079 4021068 677051..677887 1 NC_007958.1 Surfeit locus 1 677887 4021068 RPD_0599 Rhodopseudomonas palustris BisB5 Surfeit locus 1 YP_567738.1 677051 D 316057 CDS YP_567739.1 91975080 4021069 677907..679256 1 NC_007958.1 ATPase-like ATP-binding protein 679256 4021069 RPD_0600 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_567739.1 677907 D 316057 CDS YP_567740.1 91975081 4021070 679249..679782 1 NC_007958.1 response regulator receiver 679782 4021070 RPD_0601 Rhodopseudomonas palustris BisB5 response regulator receiver YP_567740.1 679249 D 316057 CDS YP_567741.1 91975082 4021071 679926..683234 1 NC_007958.1 carbamoyl-phosphate synthase L chain, ATP-binding 683234 4021071 RPD_0602 Rhodopseudomonas palustris BisB5 carbamoyl-phosphate synthase L chain, ATP-binding YP_567741.1 679926 D 316057 CDS YP_567742.1 91975083 4021072 complement(683350..684249) 1 NC_007958.1 2-dehydropantoate 2-reductase 684249 4021072 RPD_0603 Rhodopseudomonas palustris BisB5 2-dehydropantoate 2-reductase YP_567742.1 683350 R 316057 CDS YP_567743.1 91975084 4021073 684420..685463 1 NC_007958.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 685463 4021073 RPD_0604 Rhodopseudomonas palustris BisB5 guanosine 5'-monophosphate oxidoreductase YP_567743.1 684420 D 316057 CDS YP_567744.1 91975085 4021074 complement(685502..686233) 1 NC_007958.1 regulatory protein IclR 686233 4021074 RPD_0605 Rhodopseudomonas palustris BisB5 regulatory protein IclR YP_567744.1 685502 R 316057 CDS YP_567745.1 91975086 4021075 complement(686274..687122) 1 NC_007958.1 Citryl-CoA lyase 687122 4021075 RPD_0606 Rhodopseudomonas palustris BisB5 Citryl-CoA lyase YP_567745.1 686274 R 316057 CDS YP_567746.1 91975087 4021076 complement(687122..687574) 1 NC_007958.1 MaoC-like dehydratase 687574 4021076 RPD_0607 Rhodopseudomonas palustris BisB5 MaoC-like dehydratase YP_567746.1 687122 R 316057 CDS YP_567747.1 91975088 4021077 complement(687619..688815) 1 NC_007958.1 L-carnitine dehydratase/bile acid-inducible protein F 688815 4021077 RPD_0608 Rhodopseudomonas palustris BisB5 L-carnitine dehydratase/bile acid-inducible protein F YP_567747.1 687619 R 316057 CDS YP_567748.1 91975089 4021078 689010..690035 1 NC_007958.1 TRAP dicarboxylate transporter subunit DctP 690035 4021078 RPD_0609 Rhodopseudomonas palustris BisB5 TRAP dicarboxylate transporter subunit DctP YP_567748.1 689010 D 316057 CDS YP_567749.1 91975090 4021079 690069..690623 1 NC_007958.1 tripartite ATP-independent periplasmic transporter DctQ 690623 4021079 RPD_0610 Rhodopseudomonas palustris BisB5 tripartite ATP-independent periplasmic transporter DctQ YP_567749.1 690069 D 316057 CDS YP_567750.1 91975091 4021080 690637..691926 1 NC_007958.1 TRAP C4-dicarboxylate transport system permease DctM 691926 4021080 RPD_0611 Rhodopseudomonas palustris BisB5 TRAP C4-dicarboxylate transport system permease DctM YP_567750.1 690637 D 316057 CDS YP_567751.1 91975092 4021081 691986..693152 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 693152 4021081 RPD_0612 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_567751.1 691986 D 316057 CDS YP_567752.1 91975093 4021082 693181..694428 1 NC_007958.1 acetyl-CoA hydrolase/transferase 694428 4021082 RPD_0613 Rhodopseudomonas palustris BisB5 acetyl-CoA hydrolase/transferase YP_567752.1 693181 D 316057 CDS YP_567753.1 91975094 4021083 complement(694606..695994) 1 NC_007958.1 VWA containing CoxE-like protein 695994 4021083 RPD_0614 Rhodopseudomonas palustris BisB5 VWA containing CoxE-like protein YP_567753.1 694606 R 316057 CDS YP_567754.1 91975095 4021084 complement(695994..696941) 1 NC_007958.1 ATPase 696941 4021084 RPD_0615 Rhodopseudomonas palustris BisB5 ATPase YP_567754.1 695994 R 316057 CDS YP_567755.1 91975096 4021085 complement(696938..698014) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 698014 4021085 RPD_0616 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_567755.1 696938 R 316057 CDS YP_567756.1 91975097 4021086 complement(698230..700362) 1 NC_007958.1 catalase 700362 4021086 RPD_0617 Rhodopseudomonas palustris BisB5 catalase YP_567756.1 698230 R 316057 CDS YP_567757.1 91975098 4021087 complement(700581..701219) 1 NC_007958.1 cytochrome c, class I 701219 4021087 RPD_0618 Rhodopseudomonas palustris BisB5 cytochrome c, class I YP_567757.1 700581 R 316057 CDS YP_567758.1 91975099 4021088 complement(701286..702539) 1 NC_007958.1 putative L-sorbosone dehydrogenase 702539 4021088 RPD_0619 Rhodopseudomonas palustris BisB5 putative L-sorbosone dehydrogenase YP_567758.1 701286 R 316057 CDS YP_567759.1 91975100 4021089 complement(702900..704549) 1 NC_007958.1 major facilitator transporter 704549 4021089 RPD_0620 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_567759.1 702900 R 316057 CDS YP_567760.1 91975101 4021090 complement(704612..704827) 1 NC_007958.1 putative NAD-dependent formate dehydrogenase subunit delta 704827 4021090 RPD_0621 Rhodopseudomonas palustris BisB5 putative NAD-dependent formate dehydrogenase subunit delta YP_567760.1 704612 R 316057 CDS YP_567761.1 91975102 4021091 complement(704817..705644) 1 NC_007958.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 705644 4021091 RPD_0622 Rhodopseudomonas palustris BisB5 formate dehydrogenase accessory protein YP_567761.1 704817 R 316057 CDS YP_567762.1 91975103 4021092 complement(705647..708493) 1 NC_007958.1 formate dehydrogenase subunit alpha 708493 4021092 RPD_0623 Rhodopseudomonas palustris BisB5 formate dehydrogenase subunit alpha YP_567762.1 705647 R 316057 CDS YP_567763.1 91975104 4021093 complement(708505..710061) 1 NC_007958.1 NADH dehydrogenase (quinone) 710061 4021093 RPD_0624 Rhodopseudomonas palustris BisB5 NADH dehydrogenase (quinone) YP_567763.1 708505 R 316057 CDS YP_567764.1 91975105 4021094 complement(710058..710528) 1 NC_007958.1 catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma 710528 4021094 RPD_0625 Rhodopseudomonas palustris BisB5 formate dehydrogenase subunit gamma YP_567764.1 710058 R 316057 CDS YP_567765.1 91975106 4021095 complement(710645..711601) 1 NC_007958.1 LysR, substrate-binding 711601 4021095 RPD_0626 Rhodopseudomonas palustris BisB5 LysR, substrate-binding YP_567765.1 710645 R 316057 CDS YP_567766.1 91975107 4021096 complement(711847..713070) 1 NC_007958.1 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase 713070 4021096 RPD_0627 Rhodopseudomonas palustris BisB5 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase YP_567766.1 711847 R 316057 CDS YP_567767.1 91975108 4021097 713221..713928 1 NC_007958.1 type 11 methyltransferase 713928 4021097 RPD_0628 Rhodopseudomonas palustris BisB5 type 11 methyltransferase YP_567767.1 713221 D 316057 CDS YP_567768.1 91975109 4021099 714391..715464 1 NC_007958.1 high-affinity nickel-transporter 715464 4021099 RPD_0629 Rhodopseudomonas palustris BisB5 high-affinity nickel-transporter YP_567768.1 714391 D 316057 CDS YP_567769.1 91975110 4021100 715471..716496 1 NC_007958.1 transport system permease 716496 4021100 RPD_0630 Rhodopseudomonas palustris BisB5 transport system permease YP_567769.1 715471 D 316057 CDS YP_567770.1 91975111 4021101 716493..717275 1 NC_007958.1 ABC transporter-like protein 717275 4021101 RPD_0631 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567770.1 716493 D 316057 CDS YP_567771.1 91975112 4021102 717279..718118 1 NC_007958.1 periplasmic binding protein 718118 4021102 RPD_0632 Rhodopseudomonas palustris BisB5 periplasmic binding protein YP_567771.1 717279 D 316057 CDS YP_567772.1 91975113 4021103 718120..719091 1 NC_007958.1 cobalamin biosynthesis protein CobD 719091 4021103 RPD_0633 Rhodopseudomonas palustris BisB5 cobalamin biosynthesis protein CobD YP_567772.1 718120 D 316057 CDS YP_567773.1 91975114 4021104 complement(719064..720551) 1 NC_007958.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 720551 4021104 RPD_0634 Rhodopseudomonas palustris BisB5 cobyric acid synthase YP_567773.1 719064 R 316057 CDS YP_567774.1 91975115 4021105 complement(720805..721431) 1 NC_007958.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 721431 4021105 RPD_0635 Rhodopseudomonas palustris BisB5 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_567774.1 720805 R 316057 CDS YP_567775.1 91975116 4021106 complement(721428..725171) 1 NC_007958.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 725171 cobN 4021106 cobN Rhodopseudomonas palustris BisB5 cobaltochelatase subunit CobN YP_567775.1 721428 R 316057 CDS YP_567776.1 91975117 4021107 complement(725307..726314) 1 NC_007958.1 cobalamin (vitamin B12) biosynthesis CobW 726314 4021107 RPD_0637 Rhodopseudomonas palustris BisB5 cobalamin (vitamin B12) biosynthesis CobW YP_567776.1 725307 R 316057 CDS YP_567777.1 91975118 4021108 complement(726318..726851) 1 NC_007958.1 cobalbumin biosynthesis enzyme 726851 4021108 RPD_0638 Rhodopseudomonas palustris BisB5 cobalbumin biosynthesis enzyme YP_567777.1 726318 R 316057 CDS YP_567778.1 91975119 4021109 complement(726848..727435) 1 NC_007958.1 hypothetical protein 727435 4021109 RPD_0639 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567778.1 726848 R 316057 CDS YP_567779.1 91975120 4021111 727743..728798 1 NC_007958.1 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 728798 4021111 RPD_0640 Rhodopseudomonas palustris BisB5 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_567779.1 727743 D 316057 CDS YP_567780.1 91975121 4021112 728795..729496 1 NC_007958.1 Cob(II)yrinic acid a,c-diamide reductase 729496 4021112 RPD_0641 Rhodopseudomonas palustris BisB5 Cob(II)yrinic acid a,c-diamide reductase YP_567780.1 728795 D 316057 CDS YP_567781.1 91975122 4021113 729640..729906 1 NC_007958.1 hypothetical protein 729906 4021113 RPD_0642 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567781.1 729640 D 316057 CDS YP_567782.1 91975123 4021114 complement(729952..730470) 1 NC_007958.1 hypothetical protein 730470 4021114 RPD_0643 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567782.1 729952 R 316057 CDS YP_567783.1 91975124 4021115 complement(730592..730804) 1 NC_007958.1 hypothetical protein 730804 4021115 RPD_0644 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567783.1 730592 R 316057 CDS YP_567784.1 91975125 4021116 730929..731258 1 NC_007958.1 CutA1 divalent ion tolerance protein 731258 4021116 RPD_0645 Rhodopseudomonas palustris BisB5 CutA1 divalent ion tolerance protein YP_567784.1 730929 D 316057 CDS YP_567785.1 91975126 4021117 complement(731296..731760) 1 NC_007958.1 hypothetical protein 731760 4021117 RPD_0646 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567785.1 731296 R 316057 CDS YP_567786.1 91975127 4021118 complement(731828..732022) 1 NC_007958.1 hypothetical protein 732022 4021118 RPD_0647 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567786.1 731828 R 316057 CDS YP_567787.1 91975128 4021119 732250..733221 1 NC_007958.1 hypothetical protein 733221 4021119 RPD_0648 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567787.1 732250 D 316057 CDS YP_567788.1 91975129 4021120 733338..733526 1 NC_007958.1 hypothetical protein 733526 4021120 RPD_0649 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567788.1 733338 D 316057 CDS YP_567789.1 91975130 4021121 complement(733611..734483) 1 NC_007958.1 hypothetical protein 734483 4021121 RPD_0650 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567789.1 733611 R 316057 CDS YP_567790.1 91975131 4021122 complement(734561..735268) 1 NC_007958.1 phosphoglycerate mutase 735268 4021122 RPD_0651 Rhodopseudomonas palustris BisB5 phosphoglycerate mutase YP_567790.1 734561 R 316057 CDS YP_567791.1 91975132 4021123 complement(735384..737810) 1 NC_007958.1 hypothetical protein 737810 4021123 RPD_0652 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567791.1 735384 R 316057 CDS YP_567792.1 91975133 4021124 complement(737830..739389) 1 NC_007958.1 NADH/ubiquinone/plastoquinone (complex I) 739389 4021124 RPD_0653 Rhodopseudomonas palustris BisB5 NADH/ubiquinone/plastoquinone (complex I) YP_567792.1 737830 R 316057 CDS YP_567793.1 91975134 4021125 739498..740397 1 NC_007958.1 regulatory protein LysR 740397 4021125 RPD_0654 Rhodopseudomonas palustris BisB5 regulatory protein LysR YP_567793.1 739498 D 316057 CDS YP_567794.1 91975135 4021126 complement(740427..740645) 1 NC_007958.1 hypothetical protein 740645 4021126 RPD_0655 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567794.1 740427 R 316057 CDS YP_567795.1 91975136 4021127 complement(740669..741208) 1 NC_007958.1 hypothetical protein 741208 4021127 RPD_0656 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567795.1 740669 R 316057 CDS YP_567796.1 91975137 4021128 741649..742233 1 NC_007958.1 hypothetical protein 742233 4021128 RPD_0657 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567796.1 741649 D 316057 CDS YP_567797.1 91975138 4021129 complement(742397..743344) 1 NC_007958.1 dihydrodipicolinate synthase 743344 4021129 RPD_0658 Rhodopseudomonas palustris BisB5 dihydrodipicolinate synthase YP_567797.1 742397 R 316057 CDS YP_567798.1 91975139 4021130 complement(743349..743792) 1 NC_007958.1 hypothetical protein 743792 4021130 RPD_0659 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567798.1 743349 R 316057 CDS YP_567799.1 91975140 4021131 complement(743823..744101) 1 NC_007958.1 hypothetical protein 744101 4021131 RPD_0660 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567799.1 743823 R 316057 CDS YP_567800.1 91975141 4021132 complement(744381..744644) 1 NC_007958.1 hypothetical protein 744644 4021132 RPD_0661 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567800.1 744381 R 316057 CDS YP_567801.1 91975142 4021133 744806..746509 1 NC_007958.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 746509 4021133 RPD_0662 Rhodopseudomonas palustris BisB5 potassium-transporting ATPase subunit A YP_567801.1 744806 D 316057 CDS YP_567802.1 91975143 4021134 746532..748655 1 NC_007958.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 748655 4021134 RPD_0663 Rhodopseudomonas palustris BisB5 potassium-transporting ATPase subunit B YP_567802.1 746532 D 316057 CDS YP_567803.1 91975144 4021135 748667..749272 1 NC_007958.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 749272 4021135 RPD_0664 Rhodopseudomonas palustris BisB5 potassium-transporting ATPase subunit C YP_567803.1 748667 D 316057 CDS YP_567804.1 91975145 4021136 749315..752038 1 NC_007958.1 osmosensitive K+ channel His kinase sensor 752038 4021136 RPD_0665 Rhodopseudomonas palustris BisB5 osmosensitive K+ channel His kinase sensor YP_567804.1 749315 D 316057 CDS YP_567805.1 91975146 4021137 752035..752757 1 NC_007958.1 response regulator receiver 752757 4021137 RPD_0666 Rhodopseudomonas palustris BisB5 response regulator receiver YP_567805.1 752035 D 316057 CDS YP_567806.1 91975147 4021138 752792..753238 1 NC_007958.1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 753238 4021138 RPD_0667 Rhodopseudomonas palustris BisB5 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_567806.1 752792 D 316057 CDS YP_567807.1 91975148 4021139 complement(753652..754383) 1 NC_007958.1 hypothetical protein 754383 4021139 RPD_0668 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567807.1 753652 R 316057 CDS YP_567808.1 91975149 4021140 complement(754399..754674) 1 NC_007958.1 hypothetical protein 754674 4021140 RPD_0669 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567808.1 754399 R 316057 CDS YP_567809.1 91975150 4021141 complement(755121..756110) 1 NC_007958.1 hypothetical protein 756110 4021141 RPD_0670 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567809.1 755121 R 316057 CDS YP_567810.1 91975151 4021142 complement(756225..756647) 1 NC_007958.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit G 756647 4021142 RPD_0671 Rhodopseudomonas palustris BisB5 putative monovalent cation/H+ antiporter subunit G YP_567810.1 756225 R 316057 CDS YP_567811.1 91975152 4021143 complement(756655..756924) 1 NC_007958.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit F 756924 4021143 RPD_0672 Rhodopseudomonas palustris BisB5 putative monovalent cation/H+ antiporter subunit F YP_567811.1 756655 R 316057 CDS YP_567812.1 91975153 4021144 complement(756921..757409) 1 NC_007958.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 757409 4021144 RPD_0673 Rhodopseudomonas palustris BisB5 putative monovalent cation/H+ antiporter subunit E YP_567812.1 756921 R 316057 CDS YP_567813.1 91975154 4021145 complement(757406..758941) 1 NC_007958.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 758941 4021145 RPD_0674 Rhodopseudomonas palustris BisB5 putative monovalent cation/H+ antiporter subunit D YP_567813.1 757406 R 316057 CDS YP_567814.1 91975155 4021146 complement(758938..759309) 1 NC_007958.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 759309 4021146 RPD_0675 Rhodopseudomonas palustris BisB5 putative monovalent cation/H+ antiporter subunit C YP_567814.1 758938 R 316057 CDS YP_567815.1 91975156 4021147 complement(759310..762186) 1 NC_007958.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 762186 4021147 RPD_0676 Rhodopseudomonas palustris BisB5 putative monovalent cation/H+ antiporter subunit A YP_567815.1 759310 R 316057 CDS YP_567816.1 91975157 4021148 complement(762526..762936) 1 NC_007958.1 putative flagellar basal-body rod protein flgC 762936 4021148 RPD_0677 Rhodopseudomonas palustris BisB5 putative flagellar basal-body rod protein flgC YP_567816.1 762526 R 316057 CDS YP_567817.1 91975158 4021149 complement(763039..764598) 1 NC_007958.1 hypothetical protein 764598 4021149 RPD_0678 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567817.1 763039 R 316057 CDS YP_567818.1 91975159 4021150 complement(764854..765771) 1 NC_007958.1 PepSY-associated TM helix 765771 4021150 RPD_0679 Rhodopseudomonas palustris BisB5 PepSY-associated TM helix YP_567818.1 764854 R 316057 CDS YP_567819.1 91975160 4021151 766076..766342 1 NC_007958.1 hypothetical protein 766342 4021151 RPD_0680 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567819.1 766076 D 316057 CDS YP_567820.1 91975161 4021152 766525..766917 1 NC_007958.1 hypothetical protein 766917 4021152 RPD_0681 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567820.1 766525 D 316057 CDS YP_567821.1 91975162 4021153 766999..767403 1 NC_007958.1 hypothetical protein 767403 4021153 RPD_0682 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567821.1 766999 D 316057 CDS YP_567822.1 91975163 4021154 767746..768087 1 NC_007958.1 hypothetical protein 768087 4021154 RPD_0683 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567822.1 767746 D 316057 CDS YP_567823.1 91975164 4021155 768258..768476 1 NC_007958.1 hypothetical protein 768476 4021155 RPD_0684 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567823.1 768258 D 316057 CDS YP_567824.1 91975165 4021156 complement(768592..770280) 1 NC_007958.1 hypothetical protein 770280 4021156 RPD_0685 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567824.1 768592 R 316057 CDS YP_567825.1 91975166 4021157 770389..771816 1 NC_007958.1 twin-arginine translocation pathway signal 771816 4021157 RPD_0686 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_567825.1 770389 D 316057 CDS YP_567826.1 91975167 4021158 771892..773280 1 NC_007958.1 cytochrome P450 773280 4021158 RPD_0687 Rhodopseudomonas palustris BisB5 cytochrome P450 YP_567826.1 771892 D 316057 CDS YP_567827.1 91975168 4021159 773545..774021 1 NC_007958.1 hypothetical protein 774021 4021159 RPD_0688 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567827.1 773545 D 316057 CDS YP_567828.1 91975169 4021160 774216..774995 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 774995 4021160 RPD_0689 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_567828.1 774216 D 316057 CDS YP_567829.1 91975170 4021161 775218..775718 1 NC_007958.1 hypothetical protein 775718 4021161 RPD_0690 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567829.1 775218 D 316057 CDS YP_567830.1 91975171 4021162 775790..776602 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 776602 4021162 RPD_0691 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_567830.1 775790 D 316057 CDS YP_567831.1 91975172 4021164 777078..777368 1 NC_007958.1 hypothetical protein 777368 4021164 RPD_0692 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567831.1 777078 D 316057 CDS YP_567832.1 91975173 4021165 777401..777724 1 NC_007958.1 hypothetical protein 777724 4021165 RPD_0693 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567832.1 777401 D 316057 CDS YP_567833.1 91975174 4021166 777825..778712 1 NC_007958.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 778712 4021166 RPD_0694 Rhodopseudomonas palustris BisB5 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_567833.1 777825 D 316057 CDS YP_567834.1 91975175 4021167 complement(778880..780361) 1 NC_007958.1 hypothetical protein 780361 4021167 RPD_0695 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567834.1 778880 R 316057 CDS YP_567835.1 91975176 4021168 complement(780398..780934) 1 NC_007958.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 780934 4021168 RPD_0696 Rhodopseudomonas palustris BisB5 inorganic pyrophosphatase YP_567835.1 780398 R 316057 CDS YP_567836.1 91975177 4021169 complement(781009..781518) 1 NC_007958.1 GCN5-like N-acetyltransferase 781518 4021169 RPD_0697 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_567836.1 781009 R 316057 CDS YP_567837.1 91975178 4021170 complement(781739..782983) 1 NC_007958.1 amine oxidase 782983 4021170 RPD_0698 Rhodopseudomonas palustris BisB5 amine oxidase YP_567837.1 781739 R 316057 CDS YP_567838.1 91975179 4021171 complement(783101..784924) 1 NC_007958.1 GTP-binding protein TypA 784924 4021171 RPD_0699 Rhodopseudomonas palustris BisB5 GTP-binding protein TypA YP_567838.1 783101 R 316057 CDS YP_567839.1 91975180 4021173 785853..788183 1 NC_007958.1 TonB-dependent siderophore receptor 788183 4021173 RPD_0700 Rhodopseudomonas palustris BisB5 TonB-dependent siderophore receptor YP_567839.1 785853 D 316057 CDS YP_567840.1 91975181 4021174 788186..789634 1 NC_007958.1 PepSY-associated TM helix 789634 4021174 RPD_0701 Rhodopseudomonas palustris BisB5 PepSY-associated TM helix YP_567840.1 788186 D 316057 CDS YP_567841.1 91975182 4021175 complement(789647..791089) 1 NC_007958.1 TRAP transporter solute receptor TAXI family protein 791089 4021175 RPD_0702 Rhodopseudomonas palustris BisB5 TRAP transporter solute receptor TAXI family protein YP_567841.1 789647 R 316057 CDS YP_567842.1 91975183 4021176 791260..791565 1 NC_007958.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 791565 phhB 4021176 phhB Rhodopseudomonas palustris BisB5 pterin-4-alpha-carbinolamine dehydratase YP_567842.1 791260 D 316057 CDS YP_567843.1 91975184 4021177 791652..792026 1 NC_007958.1 hypothetical protein 792026 4021177 RPD_0704 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567843.1 791652 D 316057 CDS YP_567844.1 91975185 4021178 complement(792049..792684) 1 NC_007958.1 regulatory protein TetR 792684 4021178 RPD_0705 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_567844.1 792049 R 316057 CDS YP_567845.1 91975186 4021179 792836..794989 1 NC_007958.1 FAD dependent oxidoreductase 794989 4021179 RPD_0706 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_567845.1 792836 D 316057 CDS YP_567846.1 91975187 4021180 complement(795071..796045) 1 NC_007958.1 zinc-binding alcohol dehydrogenase 796045 4021180 RPD_0707 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_567846.1 795071 R 316057 CDS YP_567847.1 91975188 4021181 796333..796911 1 NC_007958.1 hypothetical protein 796911 4021181 RPD_0708 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567847.1 796333 D 316057 CDS YP_567848.1 91975189 4021182 797170..798366 1 NC_007958.1 hypothetical protein 798366 4021182 RPD_0709 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567848.1 797170 D 316057 CDS YP_567849.1 91975190 4021183 798371..798964 1 NC_007958.1 metal-dependent phosphohydrolase 798964 4021183 RPD_0710 Rhodopseudomonas palustris BisB5 metal-dependent phosphohydrolase YP_567849.1 798371 D 316057 CDS YP_567850.1 91975191 4021184 798964..799482 1 NC_007958.1 hypothetical protein 799482 4021184 RPD_0711 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567850.1 798964 D 316057 CDS YP_567851.1 91975192 4021185 799564..800340 1 NC_007958.1 PA-phosphatase-like phosphoesterase 800340 4021185 RPD_0712 Rhodopseudomonas palustris BisB5 PA-phosphatase-like phosphoesterase YP_567851.1 799564 D 316057 CDS YP_567852.1 91975193 4021186 800435..801772 1 NC_007958.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 801772 4021186 RPD_0713 Rhodopseudomonas palustris BisB5 argininosuccinate synthase YP_567852.1 800435 D 316057 CDS YP_567853.1 91975194 4021187 801988..803757 1 NC_007958.1 alkaline phosphatase 803757 4021187 RPD_0714 Rhodopseudomonas palustris BisB5 alkaline phosphatase YP_567853.1 801988 D 316057 CDS YP_567854.1 91975195 4021188 complement(803766..804347) 1 NC_007958.1 nuclease 804347 4021188 RPD_0715 Rhodopseudomonas palustris BisB5 nuclease YP_567854.1 803766 R 316057 CDS YP_567855.1 91975196 4021189 complement(804487..804708) 1 NC_007958.1 hypothetical protein 804708 4021189 RPD_0716 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567855.1 804487 R 316057 CDS YP_567856.1 91975197 4021190 804875..806227 1 NC_007958.1 Fmu (Sun) 806227 4021190 RPD_0717 Rhodopseudomonas palustris BisB5 Fmu (Sun) YP_567856.1 804875 D 316057 CDS YP_567857.1 91975198 4021191 806405..808291 1 NC_007958.1 heparinase II/III-like protein 808291 4021191 RPD_0718 Rhodopseudomonas palustris BisB5 heparinase II/III-like protein YP_567857.1 806405 D 316057 CDS YP_567858.1 91975199 4021192 808392..809984 1 NC_007958.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 809984 purH 4021192 purH Rhodopseudomonas palustris BisB5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_567858.1 808392 D 316057 CDS YP_567859.1 91975200 4021193 complement(810141..811235) 1 NC_007958.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 811235 4021193 RPD_0720 Rhodopseudomonas palustris BisB5 phospho-2-dehydro-3-deoxyheptonate aldolase YP_567859.1 810141 R 316057 CDS YP_567860.1 91975201 4021194 complement(811448..812845) 1 NC_007958.1 major facilitator transporter 812845 4021194 RPD_0721 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_567860.1 811448 R 316057 CDS YP_567861.1 91975202 4021195 812909..814693 1 NC_007958.1 gamma-glutamyltransferase 814693 4021195 RPD_0722 Rhodopseudomonas palustris BisB5 gamma-glutamyltransferase YP_567861.1 812909 D 316057 CDS YP_567862.1 91975203 4021196 814812..815693 1 NC_007958.1 short chain dehydrogenase 815693 4021196 RPD_0723 Rhodopseudomonas palustris BisB5 short chain dehydrogenase YP_567862.1 814812 D 316057 CDS YP_567863.1 91975204 4021197 complement(815928..816596) 1 NC_007958.1 glutathione S-transferase-like protein 816596 4021197 RPD_0724 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_567863.1 815928 R 316057 CDS YP_567864.1 91975205 4021198 complement(816684..817019) 1 NC_007958.1 hypothetical protein 817019 4021198 RPD_0725 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567864.1 816684 R 316057 CDS YP_567865.1 91975206 4021199 817134..817745 1 NC_007958.1 hypothetical protein 817745 4021199 RPD_0726 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567865.1 817134 D 316057 CDS YP_567866.1 91975207 4021200 817829..818431 1 NC_007958.1 DSBA oxidoreductase 818431 4021200 RPD_0727 Rhodopseudomonas palustris BisB5 DSBA oxidoreductase YP_567866.1 817829 D 316057 CDS YP_567867.1 91975208 4021201 818574..819311 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 819311 4021201 RPD_0728 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_567867.1 818574 D 316057 CDS YP_567868.1 91975209 4021202 819375..820295 1 NC_007958.1 2-dehydropantoate 2-reductase 820295 4021202 RPD_0729 Rhodopseudomonas palustris BisB5 2-dehydropantoate 2-reductase YP_567868.1 819375 D 316057 CDS YP_567869.1 91975210 4021203 820706..822352 1 NC_007958.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 822352 4021203 RPD_0730 Rhodopseudomonas palustris BisB5 cbb3-type cytochrome c oxidase subunit I YP_567869.1 820706 D 316057 CDS YP_567870.1 91975211 4021204 822364..823098 1 NC_007958.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 823098 4021204 RPD_0731 Rhodopseudomonas palustris BisB5 cbb3-type cytochrome c oxidase subunit II YP_567870.1 822364 D 316057 CDS YP_567871.1 91975212 4021205 823108..823272 1 NC_007958.1 Cbb3-type cytochrome oxidase component 823272 4021205 RPD_0732 Rhodopseudomonas palustris BisB5 Cbb3-type cytochrome oxidase component YP_567871.1 823108 D 316057 CDS YP_567872.1 91975213 4021206 823280..824161 1 NC_007958.1 cytochrome c oxidase, cbb3-type subunit III 824161 4021206 RPD_0733 Rhodopseudomonas palustris BisB5 cytochrome c oxidase, cbb3-type subunit III YP_567872.1 823280 D 316057 CDS YP_567873.1 91975214 4021207 824266..825723 1 NC_007958.1 4Fe-4S ferredoxin 825723 4021207 RPD_0734 Rhodopseudomonas palustris BisB5 4Fe-4S ferredoxin YP_567873.1 824266 D 316057 CDS YP_567874.1 91975215 4021208 825744..826244 1 NC_007958.1 FixH 826244 4021208 RPD_0735 Rhodopseudomonas palustris BisB5 FixH YP_567874.1 825744 D 316057 CDS YP_567875.1 91975216 4021209 826279..828474 1 NC_007958.1 copper-translocating P-type ATPase 828474 4021209 RPD_0736 Rhodopseudomonas palustris BisB5 copper-translocating P-type ATPase YP_567875.1 826279 D 316057 CDS YP_567876.1 91975217 4021210 828474..828641 1 NC_007958.1 cytochrome oxidase maturation protein, cbb3-type 828641 4021210 RPD_0737 Rhodopseudomonas palustris BisB5 cytochrome oxidase maturation protein, cbb3-type YP_567876.1 828474 D 316057 CDS YP_567877.1 91975218 4021211 828657..828863 1 NC_007958.1 hypothetical protein 828863 4021211 RPD_0738 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567877.1 828657 D 316057 CDS YP_567878.1 91975219 4021212 828989..829213 1 NC_007958.1 hypothetical protein 829213 4021212 RPD_0739 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567878.1 828989 D 316057 CDS YP_567879.1 91975220 4021213 829333..829842 1 NC_007958.1 regulatory protein AsnC/Lrp 829842 4021213 RPD_0740 Rhodopseudomonas palustris BisB5 regulatory protein AsnC/Lrp YP_567879.1 829333 D 316057 CDS YP_567880.1 91975221 4021214 830237..831925 1 NC_007958.1 acts as a promotor non-specific transcription repressor; circadian clock protein KaiC 831925 4021214 RPD_0741 Rhodopseudomonas palustris BisB5 circadian clock protein KaiC YP_567880.1 830237 D 316057 CDS YP_567881.1 91975222 4021215 831935..832213 1 NC_007958.1 KaiB 832213 4021215 RPD_0742 Rhodopseudomonas palustris BisB5 KaiB YP_567881.1 831935 D 316057 CDS YP_567882.1 91975223 4021216 832216..833667 1 NC_007958.1 HWE histidine kinase 833667 4021216 RPD_0743 Rhodopseudomonas palustris BisB5 HWE histidine kinase YP_567882.1 832216 D 316057 CDS YP_567883.1 91975224 4021217 834251..835432 1 NC_007958.1 integrase catalytic subunit 835432 4021217 RPD_0744 Rhodopseudomonas palustris BisB5 integrase catalytic subunit YP_567883.1 834251 D 316057 CDS YP_567884.1 91975225 4021218 835419..836774 1 NC_007958.1 sugar transferase 836774 4021218 RPD_0745 Rhodopseudomonas palustris BisB5 sugar transferase YP_567884.1 835419 D 316057 CDS YP_567885.1 91975226 4021219 836865..838133 1 NC_007958.1 group 1 glycosyl transferase 838133 4021219 RPD_0746 Rhodopseudomonas palustris BisB5 group 1 glycosyl transferase YP_567885.1 836865 D 316057 CDS YP_567886.1 91975227 4021220 838135..839007 1 NC_007958.1 dTDP-4-dehydrorhamnose reductase 839007 4021220 RPD_0747 Rhodopseudomonas palustris BisB5 dTDP-4-dehydrorhamnose reductase YP_567886.1 838135 D 316057 CDS YP_567887.1 91975228 4021221 839030..840040 1 NC_007958.1 polysaccharide biosynthesis protein CapD 840040 4021221 RPD_0748 Rhodopseudomonas palustris BisB5 polysaccharide biosynthesis protein CapD YP_567887.1 839030 D 316057 CDS YP_567888.1 91975229 4021222 840033..841154 1 NC_007958.1 UDP-N-acetylglucosamine 2-epimerase 841154 4021222 RPD_0749 Rhodopseudomonas palustris BisB5 UDP-N-acetylglucosamine 2-epimerase YP_567888.1 840033 D 316057 CDS YP_567889.1 91975230 4021223 841434..842840 1 NC_007958.1 polysaccharide biosynthesis protein 842840 4021223 RPD_0750 Rhodopseudomonas palustris BisB5 polysaccharide biosynthesis protein YP_567889.1 841434 D 316057 CDS YP_567890.1 91975231 4021224 842837..843139 1 NC_007958.1 hypothetical protein 843139 4021224 RPD_0751 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567890.1 842837 D 316057 CDS YP_567891.1 91975232 4021225 843146..843790 1 NC_007958.1 type 11 methyltransferase 843790 4021225 RPD_0752 Rhodopseudomonas palustris BisB5 type 11 methyltransferase YP_567891.1 843146 D 316057 CDS YP_567892.1 91975233 4021226 843795..844997 1 NC_007958.1 glycosyl transferase family protein 844997 4021226 RPD_0753 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_567892.1 843795 D 316057 CDS YP_567893.1 91975234 4021227 845009..846439 1 NC_007958.1 hypothetical protein 846439 4021227 RPD_0754 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567893.1 845009 D 316057 CDS YP_567894.1 91975235 4021228 846436..847470 1 NC_007958.1 group 1 glycosyl transferase 847470 4021228 RPD_0755 Rhodopseudomonas palustris BisB5 group 1 glycosyl transferase YP_567894.1 846436 D 316057 CDS YP_567895.1 91975236 4021229 complement(847530..848399) 1 NC_007958.1 type 11 methyltransferase 848399 4021229 RPD_0756 Rhodopseudomonas palustris BisB5 type 11 methyltransferase YP_567895.1 847530 R 316057 CDS YP_567896.1 91975237 4021230 848493..849173 1 NC_007958.1 glycosyl transferase family protein 849173 4021230 RPD_0757 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_567896.1 848493 D 316057 CDS YP_567897.1 91975238 4021231 849170..849508 1 NC_007958.1 hypothetical protein 849508 4021231 RPD_0758 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567897.1 849170 D 316057 CDS YP_567898.1 91975239 4021232 complement(849873..851354) 1 NC_007958.1 hypothetical protein 851354 4021232 RPD_0759 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567898.1 849873 R 316057 CDS YP_567899.1 91975240 4021233 complement(851365..852099) 1 NC_007958.1 integrase catalytic subunit 852099 4021233 RPD_0760 Rhodopseudomonas palustris BisB5 integrase catalytic subunit YP_567899.1 851365 R 316057 CDS YP_567900.1 91975241 4021235 complement(852742..853146) 1 NC_007958.1 hypothetical protein 853146 4021235 RPD_0761 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567900.1 852742 R 316057 CDS YP_567901.1 91975242 4021236 853465..853887 1 NC_007958.1 hypothetical protein 853887 4021236 RPD_0762 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567901.1 853465 D 316057 CDS YP_567902.1 91975243 4021237 complement(854240..855832) 1 NC_007958.1 gamma-glutamyltransferase 855832 4021237 RPD_0763 Rhodopseudomonas palustris BisB5 gamma-glutamyltransferase YP_567902.1 854240 R 316057 CDS YP_567903.1 91975244 4021238 complement(856152..858869) 1 NC_007958.1 GGDEF domain-containing protein 858869 4021238 RPD_0764 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_567903.1 856152 R 316057 CDS YP_567904.1 91975245 4021239 complement(859077..859478) 1 NC_007958.1 hypothetical protein 859478 4021239 RPD_0765 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567904.1 859077 R 316057 CDS YP_567905.1 91975246 4021240 859924..860136 1 NC_007958.1 hypothetical protein 860136 4021240 RPD_0766 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567905.1 859924 D 316057 CDS YP_567906.1 91975247 4021241 complement(860137..861402) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 861402 4021241 RPD_0767 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_567906.1 860137 R 316057 CDS YP_567907.1 91975248 4021242 complement(861478..861825) 1 NC_007958.1 putative cytochrome c552 861825 4021242 RPD_0768 Rhodopseudomonas palustris BisB5 putative cytochrome c552 YP_567907.1 861478 R 316057 CDS YP_567908.1 91975249 4021243 complement(861831..862304) 1 NC_007958.1 hypothetical protein 862304 4021243 RPD_0769 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567908.1 861831 R 316057 CDS YP_567909.1 91975250 4021244 complement(862465..864297) 1 NC_007958.1 GGDEF domain-containing protein 864297 4021244 RPD_0770 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_567909.1 862465 R 316057 CDS YP_567910.1 91975251 4021245 864476..865318 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 865318 4021245 RPD_0771 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_567910.1 864476 D 316057 CDS YP_567911.1 91975252 4021246 complement(865344..866723) 1 NC_007958.1 cytochrome P450 866723 4021246 RPD_0772 Rhodopseudomonas palustris BisB5 cytochrome P450 YP_567911.1 865344 R 316057 CDS YP_567912.1 91975253 4021247 complement(866844..868241) 1 NC_007958.1 adenylyl cyclase class-3/4/guanylyl cyclase 868241 4021247 RPD_0773 Rhodopseudomonas palustris BisB5 adenylyl cyclase class-3/4/guanylyl cyclase YP_567912.1 866844 R 316057 CDS YP_567913.1 91975254 4021248 868288..869235 1 NC_007958.1 putative metalloprotease; heat shock protein HtpX 869235 4021248 RPD_0774 Rhodopseudomonas palustris BisB5 heat shock protein HtpX YP_567913.1 868288 D 316057 CDS YP_567914.1 91975255 4021249 869646..871058 1 NC_007958.1 major facilitator transporter 871058 4021249 RPD_0775 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_567914.1 869646 D 316057 CDS YP_567915.1 91975256 4021250 871259..872296 1 NC_007958.1 inner-membrane translocator 872296 4021250 RPD_0776 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_567915.1 871259 D 316057 CDS YP_567916.1 91975257 4021251 872293..874065 1 NC_007958.1 ABC transporter-like protein 874065 4021251 RPD_0777 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567916.1 872293 D 316057 CDS YP_567917.1 91975258 4021252 874062..874787 1 NC_007958.1 ABC transporter-like protein 874787 4021252 RPD_0778 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567917.1 874062 D 316057 CDS YP_567918.1 91975259 4021253 874828..875979 1 NC_007958.1 extracellular ligand-binding receptor 875979 4021253 RPD_0779 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_567918.1 874828 D 316057 CDS YP_567919.1 91975260 4021254 complement(876312..877499) 1 NC_007958.1 Serine--glyoxylate transaminase 877499 4021254 RPD_0780 Rhodopseudomonas palustris BisB5 Serine--glyoxylate transaminase YP_567919.1 876312 R 316057 CDS YP_567920.1 91975261 4021255 complement(877563..878411) 1 NC_007958.1 hypothetical protein 878411 4021255 RPD_0781 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567920.1 877563 R 316057 CDS YP_567921.1 91975262 4021256 complement(878431..879159) 1 NC_007958.1 nuclease 879159 4021256 RPD_0782 Rhodopseudomonas palustris BisB5 nuclease YP_567921.1 878431 R 316057 CDS YP_567922.1 91975263 4021257 complement(879319..881058) 1 NC_007958.1 hypothetical protein 881058 4021257 RPD_0783 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567922.1 879319 R 316057 CDS YP_567923.1 91975264 4021258 881484..882359 1 NC_007958.1 peptidase C14, caspase catalytic subunit p20 882359 4021258 RPD_0784 Rhodopseudomonas palustris BisB5 peptidase C14, caspase catalytic subunit p20 YP_567923.1 881484 D 316057 CDS YP_567924.1 91975265 4021259 complement(882497..883255) 1 NC_007958.1 carbonate dehydratase 883255 4021259 RPD_0785 Rhodopseudomonas palustris BisB5 carbonate dehydratase YP_567924.1 882497 R 316057 CDS YP_567925.1 91975266 4021260 complement(883342..883974) 1 NC_007958.1 putative phage repressor 883974 4021260 RPD_0786 Rhodopseudomonas palustris BisB5 putative phage repressor YP_567925.1 883342 R 316057 CDS YP_567926.1 91975267 4021261 884308..884652 1 NC_007958.1 hypothetical protein 884652 4021261 RPD_0787 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567926.1 884308 D 316057 CDS YP_567927.1 91975268 4021262 884649..885743 1 NC_007958.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 885743 4021262 RPD_0788 Rhodopseudomonas palustris BisB5 dihydroorotate dehydrogenase 2 YP_567927.1 884649 D 316057 CDS YP_567928.1 91975269 4021263 complement(885948..886682) 1 NC_007958.1 beta-lactamase-like protein 886682 4021263 RPD_0789 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_567928.1 885948 R 316057 CDS YP_567929.1 91975270 4021264 complement(886884..887588) 1 NC_007958.1 carbonic anhydrase 887588 4021264 RPD_0790 Rhodopseudomonas palustris BisB5 carbonic anhydrase YP_567929.1 886884 R 316057 CDS YP_567930.1 91975271 4021265 complement(887722..889077) 1 NC_007958.1 MATE efflux family protein 889077 4021265 RPD_0791 Rhodopseudomonas palustris BisB5 MATE efflux family protein YP_567930.1 887722 R 316057 CDS YP_567931.1 91975272 4021266 complement(889091..889393) 1 NC_007958.1 hypothetical protein 889393 4021266 RPD_0792 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567931.1 889091 R 316057 CDS YP_567932.1 91975273 4021267 complement(889466..891358) 1 NC_007958.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 891358 4021267 RPD_0793 Rhodopseudomonas palustris BisB5 ATP-dependent DNA ligase YP_567932.1 889466 R 316057 CDS YP_567933.1 91975274 4021268 complement(891355..892404) 1 NC_007958.1 putative mRNA 3-end processing factor 892404 4021268 RPD_0794 Rhodopseudomonas palustris BisB5 putative mRNA 3-end processing factor YP_567933.1 891355 R 316057 CDS YP_567934.1 91975275 4021269 complement(892551..893915) 1 NC_007958.1 putative outer membrane protein 893915 4021269 RPD_0795 Rhodopseudomonas palustris BisB5 putative outer membrane protein YP_567934.1 892551 R 316057 CDS YP_567935.1 91975276 4021270 894262..895482 1 NC_007958.1 extracellular ligand-binding receptor 895482 4021270 RPD_0796 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_567935.1 894262 D 316057 CDS YP_567936.1 91975277 4021271 895564..898278 1 NC_007958.1 DEAD/DEAH box helicase-like protein 898278 4021271 RPD_0797 Rhodopseudomonas palustris BisB5 DEAD/DEAH box helicase-like protein YP_567936.1 895564 D 316057 CDS YP_567937.1 91975278 4021272 898317..899036 1 NC_007958.1 metallophosphoesterase 899036 4021272 RPD_0798 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_567937.1 898317 D 316057 CDS YP_567938.1 91975279 4021273 complement(899116..899907) 1 NC_007958.1 hypothetical protein 899907 4021273 RPD_0799 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567938.1 899116 R 316057 CDS YP_567939.1 91975280 4021274 complement(899907..900830) 1 NC_007958.1 hypothetical protein 900830 4021274 RPD_0800 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567939.1 899907 R 316057 CDS YP_567940.1 91975281 4021275 complement(900997..904401) 1 NC_007958.1 hypothetical protein 904401 4021275 RPD_0801 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567940.1 900997 R 316057 CDS YP_567941.1 91975282 4021276 complement(904684..905232) 1 NC_007958.1 regulatory protein TetR 905232 4021276 RPD_0802 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_567941.1 904684 R 316057 CDS YP_567942.1 91975283 4021277 905534..905920 1 NC_007958.1 hypothetical protein 905920 4021277 RPD_0803 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567942.1 905534 D 316057 CDS YP_567943.1 91975284 4021278 906012..907802 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 907802 4021278 RPD_0804 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_567943.1 906012 D 316057 CDS YP_567944.1 91975285 4021279 907961..909169 1 NC_007958.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 909169 4021279 RPD_0805 Rhodopseudomonas palustris BisB5 acetyl-CoA acetyltransferase YP_567944.1 907961 D 316057 CDS YP_567945.1 91975286 4021280 complement(909296..910069) 1 NC_007958.1 signal protein 910069 4021280 RPD_0806 Rhodopseudomonas palustris BisB5 signal protein YP_567945.1 909296 R 316057 CDS YP_567946.1 91975287 4021281 910168..912384 1 NC_007958.1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase 912384 4021281 RPD_0807 Rhodopseudomonas palustris BisB5 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_567946.1 910168 D 316057 CDS YP_567947.1 91975288 4021282 complement(912636..913250) 1 NC_007958.1 glutathione S-transferase-like protein 913250 4021282 RPD_0808 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_567947.1 912636 R 316057 CDS YP_567948.1 91975289 4021283 913300..913869 1 NC_007958.1 MarR family transcriptional regulator 913869 4021283 RPD_0809 Rhodopseudomonas palustris BisB5 MarR family transcriptional regulator YP_567948.1 913300 D 316057 CDS YP_567949.1 91975290 4021284 913963..915333 1 NC_007958.1 glutamate--cysteine ligase 915333 4021284 RPD_0810 Rhodopseudomonas palustris BisB5 glutamate--cysteine ligase YP_567949.1 913963 D 316057 CDS YP_567950.1 91975291 4021285 915473..916027 1 NC_007958.1 hypothetical protein 916027 4021285 RPD_0811 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567950.1 915473 D 316057 CDS YP_567951.1 91975292 4021286 complement(916107..917534) 1 NC_007958.1 peptidase U62, modulator of DNA gyrase 917534 4021286 RPD_0812 Rhodopseudomonas palustris BisB5 peptidase U62, modulator of DNA gyrase YP_567951.1 916107 R 316057 CDS YP_567952.1 91975293 4021287 complement(917784..918428) 1 NC_007958.1 invasion associated locus B 918428 4021287 RPD_0813 Rhodopseudomonas palustris BisB5 invasion associated locus B YP_567952.1 917784 R 316057 CDS YP_567953.1 91975294 4021288 918743..919597 1 NC_007958.1 cytochrome-c oxidase 919597 4021288 RPD_0814 Rhodopseudomonas palustris BisB5 cytochrome-c oxidase YP_567953.1 918743 D 316057 CDS YP_567954.1 91975295 4021289 919666..921291 1 NC_007958.1 cytochrome-c oxidase 921291 4021289 RPD_0815 Rhodopseudomonas palustris BisB5 cytochrome-c oxidase YP_567954.1 919666 D 316057 CDS YP_567955.1 91975296 4021290 921365..922306 1 NC_007958.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 922306 4021290 RPD_0816 Rhodopseudomonas palustris BisB5 protoheme IX farnesyltransferase YP_567955.1 921365 D 316057 CDS YP_567956.1 91975297 4021291 922319..922480 1 NC_007958.1 putative CoxF 922480 4021291 RPD_0817 Rhodopseudomonas palustris BisB5 putative CoxF YP_567956.1 922319 D 316057 CDS YP_567957.1 91975298 4021292 922495..923115 1 NC_007958.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 923115 4021292 RPD_0818 Rhodopseudomonas palustris BisB5 cytochrome C oxidase assembly protein YP_567957.1 922495 D 316057 CDS YP_567958.1 91975299 4021293 923196..924050 1 NC_007958.1 cytochrome c oxidase subunit III 924050 4021293 RPD_0819 Rhodopseudomonas palustris BisB5 cytochrome c oxidase subunit III YP_567958.1 923196 D 316057 CDS YP_567959.1 91975300 4021294 924114..924506 1 NC_007958.1 hypothetical protein 924506 4021294 RPD_0820 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567959.1 924114 D 316057 CDS YP_567960.1 91975301 4021295 924503..925309 1 NC_007958.1 putative surfeit 1 925309 4021295 RPD_0821 Rhodopseudomonas palustris BisB5 putative surfeit 1 YP_567960.1 924503 D 316057 CDS YP_567961.1 91975302 4021296 925454..926872 1 NC_007958.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 926872 4021296 RPD_0822 Rhodopseudomonas palustris BisB5 threonine synthase YP_567961.1 925454 D 316057 CDS YP_567962.1 91975303 4021297 926869..928158 1 NC_007958.1 peptidase M16-like 928158 4021297 RPD_0823 Rhodopseudomonas palustris BisB5 peptidase M16-like YP_567962.1 926869 D 316057 CDS YP_567963.1 91975304 4021298 928231..928818 1 NC_007958.1 GCN5-like N-acetyltransferase 928818 4021298 RPD_0824 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_567963.1 928231 D 316057 CDS YP_567964.1 91975305 4021299 928925..929587 1 NC_007958.1 hypothetical protein 929587 4021299 RPD_0825 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567964.1 928925 D 316057 CDS YP_567965.1 91975306 4021300 complement(929785..930747) 1 NC_007958.1 transposase, IS4 930747 4021300 RPD_0826 Rhodopseudomonas palustris BisB5 transposase, IS4 YP_567965.1 929785 R 316057 CDS YP_567966.1 91975307 4021301 complement(931024..931515) 1 NC_007958.1 H+-transporting two-sector ATPase, B/B' subunit 931515 4021301 RPD_0827 Rhodopseudomonas palustris BisB5 H+-transporting two-sector ATPase, B/B' subunit YP_567966.1 931024 R 316057 CDS YP_567967.1 91975308 4021302 complement(931521..932078) 1 NC_007958.1 H+-transporting two-sector ATPase, B/B' subunit 932078 4021302 RPD_0828 Rhodopseudomonas palustris BisB5 H+-transporting two-sector ATPase, B/B' subunit YP_567967.1 931521 R 316057 CDS YP_567968.1 91975309 4021303 complement(932131..932358) 1 NC_007958.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 932358 4021303 RPD_0829 Rhodopseudomonas palustris BisB5 F0F1 ATP synthase subunit C YP_567968.1 932131 R 316057 CDS YP_567969.1 91975310 4021304 complement(932409..933161) 1 NC_007958.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 933161 4021304 RPD_0830 Rhodopseudomonas palustris BisB5 F0F1 ATP synthase subunit A YP_567969.1 932409 R 316057 CDS YP_567970.1 91975311 4021305 complement(933232..933618) 1 NC_007958.1 FoF1 ATP synthase subunit I 933618 4021305 RPD_0831 Rhodopseudomonas palustris BisB5 FoF1 ATP synthase subunit I YP_567970.1 933232 R 316057 CDS YP_567971.1 91975312 4021306 933919..934542 1 NC_007958.1 DSBA oxidoreductase 934542 4021306 RPD_0832 Rhodopseudomonas palustris BisB5 DSBA oxidoreductase YP_567971.1 933919 D 316057 CDS YP_567972.1 91975313 4021307 934622..935275 1 NC_007958.1 hypothetical protein 935275 4021307 RPD_0833 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567972.1 934622 D 316057 CDS YP_567973.1 91975314 4021308 935321..935794 1 NC_007958.1 hypothetical protein 935794 4021308 RPD_0834 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567973.1 935321 D 316057 CDS YP_567974.1 91975315 4021309 complement(935891..937555) 1 NC_007958.1 general substrate transporter 937555 4021309 RPD_0835 Rhodopseudomonas palustris BisB5 general substrate transporter YP_567974.1 935891 R 316057 CDS YP_567975.1 91975316 4021310 937871..938545 1 NC_007958.1 LuxR family two component transcriptional regulator 938545 4021310 RPD_0836 Rhodopseudomonas palustris BisB5 LuxR family two component transcriptional regulator YP_567975.1 937871 D 316057 CDS YP_567976.1 91975317 4021311 complement(938626..942132) 1 NC_007958.1 periplasmic sensor hybrid histidine kinase 942132 4021311 RPD_0837 Rhodopseudomonas palustris BisB5 periplasmic sensor hybrid histidine kinase YP_567976.1 938626 R 316057 CDS YP_567977.1 91975318 4021312 complement(942265..943494) 1 NC_007958.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 943494 4021312 RPD_0838 Rhodopseudomonas palustris BisB5 5-aminolevulinate synthase YP_567977.1 942265 R 316057 CDS YP_567978.1 91975319 4021313 complement(943706..944770) 1 NC_007958.1 beta-lactamase-like protein 944770 4021313 RPD_0839 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_567978.1 943706 R 316057 CDS YP_567979.1 91975320 4021314 complement(944959..947097) 1 NC_007958.1 chemotaxis sensory transducer 947097 4021314 RPD_0840 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_567979.1 944959 R 316057 CDS YP_567980.1 91975321 4021315 complement(947338..948066) 1 NC_007958.1 putative outer membrane protein 948066 4021315 RPD_0841 Rhodopseudomonas palustris BisB5 putative outer membrane protein YP_567980.1 947338 R 316057 CDS YP_567981.1 91975322 4021316 948397..948645 1 NC_007958.1 hypothetical protein 948645 4021316 RPD_0842 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567981.1 948397 D 316057 CDS YP_567982.1 91975323 4021317 948642..949406 1 NC_007958.1 ABC transporter-like protein 949406 4021317 RPD_0843 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_567982.1 948642 D 316057 CDS YP_567983.1 91975324 4021318 949410..950282 1 NC_007958.1 hypothetical protein 950282 4021318 RPD_0844 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567983.1 949410 D 316057 CDS YP_567984.1 91975325 4021319 950286..951155 1 NC_007958.1 periplasmic solute binding protein 951155 4021319 RPD_0845 Rhodopseudomonas palustris BisB5 periplasmic solute binding protein YP_567984.1 950286 D 316057 CDS YP_567985.1 91975326 4021320 951400..952461 1 NC_007958.1 cobalamin synthesis protein, P47K 952461 4021320 RPD_0846 Rhodopseudomonas palustris BisB5 cobalamin synthesis protein, P47K YP_567985.1 951400 D 316057 CDS YP_567986.1 91975327 4021321 952458..953477 1 NC_007958.1 WD-40 repeat-containing protein 953477 4021321 RPD_0847 Rhodopseudomonas palustris BisB5 WD-40 repeat-containing protein YP_567986.1 952458 D 316057 CDS YP_567987.1 91975328 4021322 953506..954228 1 NC_007958.1 MgtC/SapB transporter 954228 4021322 RPD_0848 Rhodopseudomonas palustris BisB5 MgtC/SapB transporter YP_567987.1 953506 D 316057 CDS YP_567988.1 91975329 4021323 954333..954671 1 NC_007958.1 hypothetical protein 954671 4021323 RPD_0849 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567988.1 954333 D 316057 CDS YP_567989.1 91975330 4021324 complement(954761..956188) 1 NC_007958.1 homospermidine synthase 956188 4021324 RPD_0850 Rhodopseudomonas palustris BisB5 homospermidine synthase YP_567989.1 954761 R 316057 CDS YP_567990.1 91975331 4021325 complement(956303..956719) 1 NC_007958.1 transcription elongation factor GreA/GreB region 956719 4021325 RPD_0851 Rhodopseudomonas palustris BisB5 transcription elongation factor GreA/GreB region YP_567990.1 956303 R 316057 CDS YP_567991.1 91975332 4021326 complement(956731..957201) 1 NC_007958.1 hypothetical protein 957201 4021326 RPD_0852 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567991.1 956731 R 316057 CDS YP_567992.1 91975333 4021327 complement(957592..957981) 1 NC_007958.1 endoribonuclease L-PSP 957981 4021327 RPD_0853 Rhodopseudomonas palustris BisB5 endoribonuclease L-PSP YP_567992.1 957592 R 316057 CDS YP_567993.1 91975334 4021328 complement(958083..958241) 1 NC_007958.1 hypothetical protein 958241 4021328 RPD_0854 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567993.1 958083 R 316057 CDS YP_567994.1 91975335 4021329 complement(958252..958839) 1 NC_007958.1 GCN5-like N-acetyltransferase 958839 4021329 RPD_0855 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_567994.1 958252 R 316057 CDS YP_567995.1 91975336 4021330 complement(958984..960126) 1 NC_007958.1 ornithine decarboxylase 960126 4021330 RPD_0856 Rhodopseudomonas palustris BisB5 ornithine decarboxylase YP_567995.1 958984 R 316057 CDS YP_567996.1 91975337 4021331 complement(960894..961154) 1 NC_007958.1 hypothetical protein 961154 4021331 RPD_0857 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567996.1 960894 R 316057 CDS YP_567997.1 91975338 4021332 961351..963441 1 NC_007958.1 peptidyl-dipeptidase Dcp 963441 4021332 RPD_0858 Rhodopseudomonas palustris BisB5 peptidyl-dipeptidase Dcp YP_567997.1 961351 D 316057 CDS YP_567998.1 91975339 4021333 963446..964099 1 NC_007958.1 hypothetical protein 964099 4021333 RPD_0859 Rhodopseudomonas palustris BisB5 hypothetical protein YP_567998.1 963446 D 316057 CDS YP_567999.1 91975340 4021334 964111..965280 1 NC_007958.1 high-affinity nickel-transporter 965280 4021334 RPD_0860 Rhodopseudomonas palustris BisB5 high-affinity nickel-transporter YP_567999.1 964111 D 316057 CDS YP_568000.1 91975341 4021335 965454..966491 1 NC_007958.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 966491 hemH 4021335 hemH Rhodopseudomonas palustris BisB5 ferrochelatase YP_568000.1 965454 D 316057 CDS YP_568001.1 91975342 4021336 966741..967751 1 NC_007958.1 hypothetical protein 967751 4021336 RPD_0862 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568001.1 966741 D 316057 CDS YP_568002.1 91975343 4021337 967782..968231 1 NC_007958.1 hypothetical protein 968231 4021337 RPD_0863 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568002.1 967782 D 316057 CDS YP_568003.1 91975344 4021338 complement(968408..969418) 1 NC_007958.1 KpsF/GutQ family protein 969418 4021338 RPD_0864 Rhodopseudomonas palustris BisB5 KpsF/GutQ family protein YP_568003.1 968408 R 316057 CDS YP_568004.1 91975345 4021339 969657..971351 1 NC_007958.1 hypothetical protein 971351 4021339 RPD_0865 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568004.1 969657 D 316057 CDS YP_568005.1 91975346 4021340 971461..972498 1 NC_007958.1 hypothetical protein 972498 4021340 RPD_0866 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568005.1 971461 D 316057 CDS YP_568006.1 91975347 4021341 complement(972563..972835) 1 NC_007958.1 hypothetical protein 972835 4021341 RPD_0867 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568006.1 972563 R 316057 CDS YP_568007.1 91975348 4021342 973066..974550 1 NC_007958.1 GGDEF domain-containing protein 974550 4021342 RPD_0868 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_568007.1 973066 D 316057 CDS YP_568008.1 91975349 4021343 complement(974643..975974) 1 NC_007958.1 6-aminohexanoate-dimer hydrolase 975974 4021343 RPD_0869 Rhodopseudomonas palustris BisB5 6-aminohexanoate-dimer hydrolase YP_568008.1 974643 R 316057 CDS YP_568009.1 91975350 4021344 complement(976039..976911) 1 NC_007958.1 UTP-glucose-1-phosphate uridylyltransferase 976911 4021344 RPD_0870 Rhodopseudomonas palustris BisB5 UTP-glucose-1-phosphate uridylyltransferase YP_568009.1 976039 R 316057 CDS YP_568010.1 91975351 4021345 complement(977029..977973) 1 NC_007958.1 alpha/beta hydrolase fold protein 977973 4021345 RPD_0871 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_568010.1 977029 R 316057 CDS YP_568011.1 91975352 4021346 978190..978669 1 NC_007958.1 heat shock protein Hsp20 978669 4021346 RPD_0872 Rhodopseudomonas palustris BisB5 heat shock protein Hsp20 YP_568011.1 978190 D 316057 CDS YP_568012.1 91975353 4021347 978727..979746 1 NC_007958.1 hypothetical protein 979746 4021347 RPD_0873 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568012.1 978727 D 316057 CDS YP_568013.1 91975354 4021348 complement(979801..980541) 1 NC_007958.1 hypothetical protein 980541 4021348 RPD_0874 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568013.1 979801 R 316057 CDS YP_568014.1 91975355 4021349 980981..985729 1 NC_007958.1 glutamate synthase ferredoxin subunit 985729 4021349 RPD_0875 Rhodopseudomonas palustris BisB5 glutamate synthase ferredoxin subunit YP_568014.1 980981 D 316057 CDS YP_568015.2 162138291 4021350 985894..987348 1 NC_007958.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 987348 gltD 4021350 gltD Rhodopseudomonas palustris BisB5 glutamate synthase subunit beta YP_568015.2 985894 D 316057 CDS YP_568016.1 91975357 4021351 complement(987359..988312) 1 NC_007958.1 consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate; anaerobic benzoate catabolism transcriptional regulator 988312 4021351 RPD_0877 Rhodopseudomonas palustris BisB5 anaerobic benzoate catabolism transcriptional regulator YP_568016.1 987359 R 316057 CDS YP_568017.1 91975358 4021352 988434..989990 1 NC_007958.1 benzoate-CoA ligase family 989990 4021352 RPD_0878 Rhodopseudomonas palustris BisB5 benzoate-CoA ligase family YP_568017.1 988434 D 316057 CDS YP_568018.1 91975359 4021353 990031..990852 1 NC_007958.1 alpha/beta hydrolase fold protein 990852 4021353 RPD_0879 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_568018.1 990031 D 316057 CDS YP_568019.1 91975360 4021354 990962..992650 1 NC_007958.1 cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA; benzoyl-CoA-dihydrodiol lyase 992650 4021354 RPD_0880 Rhodopseudomonas palustris BisB5 benzoyl-CoA-dihydrodiol lyase YP_568019.1 990962 D 316057 CDS YP_568020.1 91975361 4021355 992726..994216 1 NC_007958.1 putative benzoyl-CoA oxygenase component 994216 4021355 RPD_0881 Rhodopseudomonas palustris BisB5 putative benzoyl-CoA oxygenase component YP_568020.1 992726 D 316057 CDS YP_568021.1 91975362 4021356 complement(994467..995273) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 995273 4021356 RPD_0882 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568021.1 994467 R 316057 CDS YP_568022.1 91975363 4021357 complement(995473..996531) 1 NC_007958.1 polysaccharide deacetylase 996531 4021357 RPD_0883 Rhodopseudomonas palustris BisB5 polysaccharide deacetylase YP_568022.1 995473 R 316057 CDS YP_568023.1 91975364 4021358 996686..998080 1 NC_007958.1 OmpA/MotB 998080 4021358 RPD_0884 Rhodopseudomonas palustris BisB5 OmpA/MotB YP_568023.1 996686 D 316057 CDS YP_568024.1 91975365 4021359 998088..998381 1 NC_007958.1 hypothetical protein 998381 4021359 RPD_0885 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568024.1 998088 D 316057 CDS YP_568025.1 91975366 4021360 998619..999653 1 NC_007958.1 hypothetical protein 999653 4021360 RPD_0886 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568025.1 998619 D 316057 CDS YP_568026.1 91975367 4021361 999656..1001011 1 NC_007958.1 ATPase-like ATP-binding protein 1001011 4021361 RPD_0887 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_568026.1 999656 D 316057 CDS YP_568027.1 91975368 4021362 1001147..1002157 1 NC_007958.1 periplasmic phosphate binding protein 1002157 4021362 RPD_0888 Rhodopseudomonas palustris BisB5 periplasmic phosphate binding protein YP_568027.1 1001147 D 316057 CDS YP_568028.1 91975369 4021363 1002392..1003393 1 NC_007958.1 phosphate ABC transporter permease 1003393 4021363 RPD_0889 Rhodopseudomonas palustris BisB5 phosphate ABC transporter permease YP_568028.1 1002392 D 316057 CDS YP_568029.1 91975370 4021364 1003396..1004256 1 NC_007958.1 phosphate ABC transporter permease 1004256 4021364 RPD_0890 Rhodopseudomonas palustris BisB5 phosphate ABC transporter permease YP_568029.1 1003396 D 316057 CDS YP_568030.1 91975371 4021365 1004253..1005077 1 NC_007958.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1005077 pstB 4021365 pstB Rhodopseudomonas palustris BisB5 phosphate transporter ATP-binding protein YP_568030.1 1004253 D 316057 CDS YP_568031.1 91975372 4021366 1005103..1005819 1 NC_007958.1 phosphate uptake regulator PhoU 1005819 4021366 RPD_0892 Rhodopseudomonas palustris BisB5 phosphate uptake regulator PhoU YP_568031.1 1005103 D 316057 CDS YP_568032.1 91975373 4021367 1005874..1006575 1 NC_007958.1 winged helix family two component transcriptional regulator 1006575 4021367 RPD_0893 Rhodopseudomonas palustris BisB5 winged helix family two component transcriptional regulator YP_568032.1 1005874 D 316057 CDS YP_568033.1 91975374 4021368 complement(1006930..1007442) 1 NC_007958.1 GcrA cell cycle regulator 1007442 4021368 RPD_0894 Rhodopseudomonas palustris BisB5 GcrA cell cycle regulator YP_568033.1 1006930 R 316057 CDS YP_568034.1 91975375 4021369 1007898..1009109 1 NC_007958.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 1009109 argD 4021369 argD Rhodopseudomonas palustris BisB5 acetylornithine transaminase protein YP_568034.1 1007898 D 316057 CDS YP_568035.1 91975376 4021370 1009109..1010059 1 NC_007958.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1010059 4021370 RPD_0896 Rhodopseudomonas palustris BisB5 ornithine carbamoyltransferase YP_568035.1 1009109 D 316057 CDS YP_568036.1 91975377 4021371 1010279..1011292 1 NC_007958.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 1011292 hslO 4021371 hslO Rhodopseudomonas palustris BisB5 Hsp33-like chaperonin YP_568036.1 1010279 D 316057 CDS YP_568037.1 91975378 4021372 complement(1011433..1011855) 1 NC_007958.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 1011855 apaG 4021372 apaG Rhodopseudomonas palustris BisB5 ApaG protein YP_568037.1 1011433 R 316057 CDS YP_568038.1 91975379 4021373 1011976..1013430 1 NC_007958.1 putative OpgC protein 1013430 4021373 RPD_0899 Rhodopseudomonas palustris BisB5 putative OpgC protein YP_568038.1 1011976 D 316057 CDS YP_568039.1 91975380 4021374 1013427..1014206 1 NC_007958.1 hypothetical protein 1014206 4021374 RPD_0900 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568039.1 1013427 D 316057 CDS YP_568040.1 91975381 4021375 1014242..1015153 1 NC_007958.1 G-D-S-L lipolytic protein 1015153 4021375 RPD_0901 Rhodopseudomonas palustris BisB5 G-D-S-L lipolytic protein YP_568040.1 1014242 D 316057 CDS YP_568041.1 91975382 4021376 complement(1015170..1016030) 1 NC_007958.1 hypothetical protein 1016030 4021376 RPD_0902 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568041.1 1015170 R 316057 CDS YP_568042.1 91975383 4021377 complement(1016203..1017429) 1 NC_007958.1 catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis; O-succinylhomoserine sulfhydrylase 1017429 4021377 RPD_0903 Rhodopseudomonas palustris BisB5 O-succinylhomoserine sulfhydrylase YP_568042.1 1016203 R 316057 CDS YP_568043.1 91975384 4021378 1017635..1018801 1 NC_007958.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 1018801 4021378 RPD_0904 Rhodopseudomonas palustris BisB5 2'-deoxycytidine 5'-triphosphate deaminase YP_568043.1 1017635 D 316057 CDS YP_568044.1 91975385 4021379 complement(1018962..1020950) 1 NC_007958.1 twin-arginine translocation pathway signal 1020950 4021379 RPD_0905 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_568044.1 1018962 R 316057 CDS YP_568045.1 91975386 4021380 complement(1021215..1022558) 1 NC_007958.1 L-sorbosone dehydrogenase 1022558 4021380 RPD_0906 Rhodopseudomonas palustris BisB5 L-sorbosone dehydrogenase YP_568045.1 1021215 R 316057 CDS YP_568046.1 91975387 4021381 1022707..1023741 1 NC_007958.1 hypothetical protein 1023741 4021381 RPD_0907 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568046.1 1022707 D 316057 CDS YP_568047.1 91975388 4021382 1023877..1025328 1 NC_007958.1 multi anti extrusion protein MatE 1025328 4021382 RPD_0908 Rhodopseudomonas palustris BisB5 multi anti extrusion protein MatE YP_568047.1 1023877 D 316057 CDS YP_568048.1 91975389 4021383 complement(1025314..1025901) 1 NC_007958.1 methylated-DNA--protein-cysteine methyltransferase 1025901 4021383 RPD_0909 Rhodopseudomonas palustris BisB5 methylated-DNA--protein-cysteine methyltransferase YP_568048.1 1025314 R 316057 CDS YP_568049.1 91975390 4021385 complement(1026510..1028204) 1 NC_007958.1 filamentation induced by cAMP protein Fic 1028204 4021385 RPD_0910 Rhodopseudomonas palustris BisB5 filamentation induced by cAMP protein Fic YP_568049.1 1026510 R 316057 CDS YP_568050.1 91975391 4021386 1028482..1028628 1 NC_007958.1 hypothetical protein 1028628 4021386 RPD_0911 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568050.1 1028482 D 316057 CDS YP_568051.1 91975392 4021387 complement(1028726..1029391) 1 NC_007958.1 hypothetical protein 1029391 4021387 RPD_0912 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568051.1 1028726 R 316057 CDS YP_568052.1 91975393 4021388 complement(1029642..1030163) 1 NC_007958.1 hypothetical protein 1030163 4021388 RPD_0913 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568052.1 1029642 R 316057 CDS YP_568053.1 91975394 4021389 complement(1030347..1032638) 1 NC_007958.1 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 1032638 4021389 RPD_0914 Rhodopseudomonas palustris BisB5 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_568053.1 1030347 R 316057 CDS YP_568054.1 91975395 4021390 complement(1032793..1033665) 1 NC_007958.1 molybdopterin dehydrogenase 1033665 4021390 RPD_0915 Rhodopseudomonas palustris BisB5 molybdopterin dehydrogenase YP_568054.1 1032793 R 316057 CDS YP_568055.1 91975396 4021391 complement(1033670..1034371) 1 NC_007958.1 twin-arginine translocation pathway signal 1034371 4021391 RPD_0916 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_568055.1 1033670 R 316057 CDS YP_568056.1 91975397 4021392 1034576..1036204 1 NC_007958.1 alpha amylase catalytic subunit 1036204 4021392 RPD_0917 Rhodopseudomonas palustris BisB5 alpha amylase catalytic subunit YP_568056.1 1034576 D 316057 CDS YP_568057.1 91975398 4021393 1036448..1036690 1 NC_007958.1 hypothetical protein 1036690 4021393 RPD_0918 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568057.1 1036448 D 316057 CDS YP_568058.1 91975399 4021394 complement(1036931..1038238) 1 NC_007958.1 hypothetical protein 1038238 4021394 RPD_0919 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568058.1 1036931 R 316057 CDS YP_568059.1 91975400 4021395 complement(1038627..1038980) 1 NC_007958.1 hypothetical protein 1038980 4021395 RPD_0920 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568059.1 1038627 R 316057 CDS YP_568060.1 91975401 4021396 1039866..1040324 1 NC_007958.1 hypothetical protein 1040324 4021396 RPD_0921 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568060.1 1039866 D 316057 CDS YP_568061.1 91975402 4021397 complement(1040486..1041697) 1 NC_007958.1 putative transmembrane protein 1041697 4021397 RPD_0922 Rhodopseudomonas palustris BisB5 putative transmembrane protein YP_568061.1 1040486 R 316057 CDS YP_568062.1 91975403 4021398 1041931..1042521 1 NC_007958.1 cytochrome B561 1042521 4021398 RPD_0923 Rhodopseudomonas palustris BisB5 cytochrome B561 YP_568062.1 1041931 D 316057 CDS YP_568063.1 91975404 4021399 complement(1042762..1043493) 1 NC_007958.1 hypothetical protein 1043493 4021399 RPD_0924 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568063.1 1042762 R 316057 CDS YP_568064.1 91975405 4021400 1043563..1044444 1 NC_007958.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 1044444 4021400 RPD_0925 Rhodopseudomonas palustris BisB5 glutamyl-Q tRNA(Asp) synthetase YP_568064.1 1043563 D 316057 CDS YP_568065.1 91975406 4021401 1044540..1045751 1 NC_007958.1 histidine kinase 1045751 4021401 RPD_0926 Rhodopseudomonas palustris BisB5 histidine kinase YP_568065.1 1044540 D 316057 CDS YP_568066.1 91975407 4021402 complement(1045678..1046571) 1 NC_007958.1 ribonuclease BN 1046571 4021402 RPD_0927 Rhodopseudomonas palustris BisB5 ribonuclease BN YP_568066.1 1045678 R 316057 CDS YP_568067.1 91975408 4021403 1046664..1046903 1 NC_007958.1 hypoxia induced protein region 1046903 4021403 RPD_0928 Rhodopseudomonas palustris BisB5 hypoxia induced protein region YP_568067.1 1046664 D 316057 CDS YP_568068.1 91975409 4021404 1046958..1047530 1 NC_007958.1 ATP 1047530 4021404 RPD_0929 Rhodopseudomonas palustris BisB5 ATP YP_568068.1 1046958 D 316057 CDS YP_568069.1 91975410 4021405 1047635..1048384 1 NC_007958.1 electron transfer flavoprotein subunit beta 1048384 4021405 RPD_0930 Rhodopseudomonas palustris BisB5 electron transfer flavoprotein subunit beta YP_568069.1 1047635 D 316057 CDS YP_568070.1 91975411 4021406 1048384..1049334 1 NC_007958.1 electron transfer flavoprotein subunit alpha 1049334 4021406 RPD_0931 Rhodopseudomonas palustris BisB5 electron transfer flavoprotein subunit alpha YP_568070.1 1048384 D 316057 CDS YP_568071.1 91975412 4021407 1049443..1050381 1 NC_007958.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 1050381 4021407 RPD_0932 Rhodopseudomonas palustris BisB5 3-hydroxybutyryl-CoA dehydrogenase YP_568071.1 1049443 D 316057 CDS YP_568072.1 91975413 4021408 1050538..1050738 1 NC_007958.1 hypothetical protein 1050738 4021408 RPD_0933 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568072.1 1050538 D 316057 CDS YP_568073.1 91975414 4021409 complement(1050754..1051110) 1 NC_007958.1 hypothetical protein 1051110 4021409 RPD_0934 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568073.1 1050754 R 316057 CDS YP_568074.1 91975415 4021410 complement(1051227..1051895) 1 NC_007958.1 thioredoxin-like protein 1051895 4021410 RPD_0935 Rhodopseudomonas palustris BisB5 thioredoxin-like protein YP_568074.1 1051227 R 316057 CDS YP_568075.1 91975416 4021411 1051991..1053388 1 NC_007958.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1053388 4021411 RPD_0936 Rhodopseudomonas palustris BisB5 argininosuccinate lyase YP_568075.1 1051991 D 316057 CDS YP_568076.1 91975417 4021412 1053481..1053732 1 NC_007958.1 hypothetical protein 1053732 4021412 RPD_0937 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568076.1 1053481 D 316057 CDS YP_568077.1 91975418 4021413 1053739..1055004 1 NC_007958.1 diaminopimelate decarboxylase 1055004 4021413 RPD_0938 Rhodopseudomonas palustris BisB5 diaminopimelate decarboxylase YP_568077.1 1053739 D 316057 CDS YP_568078.1 91975419 4021414 complement(1055236..1055616) 1 NC_007958.1 carboxymuconolactone decarboxylase 1055616 4021414 RPD_0939 Rhodopseudomonas palustris BisB5 carboxymuconolactone decarboxylase YP_568078.1 1055236 R 316057 CDS YP_568079.1 91975420 4021415 1055775..1058330 1 NC_007958.1 hypothetical protein 1058330 4021415 RPD_0940 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568079.1 1055775 D 316057 CDS YP_568080.1 91975421 4021416 complement(1058511..1058888) 1 NC_007958.1 response regulator receiver 1058888 4021416 RPD_0941 Rhodopseudomonas palustris BisB5 response regulator receiver YP_568080.1 1058511 R 316057 CDS YP_568081.1 91975422 4021417 complement(1058952..1059833) 1 NC_007958.1 Zinc finger/thioredoxin putative 1059833 4021417 RPD_0942 Rhodopseudomonas palustris BisB5 Zinc finger/thioredoxin putative YP_568081.1 1058952 R 316057 CDS YP_568082.1 91975423 4021418 1059977..1060636 1 NC_007958.1 ABC transporter-like protein 1060636 4021418 RPD_0943 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568082.1 1059977 D 316057 CDS YP_568083.1 91975424 4021419 1060629..1061609 1 NC_007958.1 hypothetical protein 1061609 4021419 RPD_0944 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568083.1 1060629 D 316057 CDS YP_568084.1 91975425 4021420 1061855..1062580 1 NC_007958.1 hypothetical protein 1062580 4021420 RPD_0945 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568084.1 1061855 D 316057 CDS YP_568085.1 91975426 4021421 1062594..1063403 1 NC_007958.1 phospholipid/glycerol acyltransferase 1063403 4021421 RPD_0946 Rhodopseudomonas palustris BisB5 phospholipid/glycerol acyltransferase YP_568085.1 1062594 D 316057 CDS YP_568086.1 91975427 4021422 complement(1063575..1064153) 1 NC_007958.1 ChaC-like protein 1064153 4021422 RPD_0947 Rhodopseudomonas palustris BisB5 ChaC-like protein YP_568086.1 1063575 R 316057 CDS YP_568087.1 91975428 4021423 1064314..1065507 1 NC_007958.1 hypothetical protein 1065507 4021423 RPD_0948 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568087.1 1064314 D 316057 CDS YP_568088.1 91975429 4021424 complement(1065732..1067354) 1 NC_007958.1 ABC transporter-like protein 1067354 4021424 RPD_0949 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568088.1 1065732 R 316057 CDS YP_568089.1 91975430 4021425 complement(1067544..1068530) 1 NC_007958.1 arginase 1068530 4021425 RPD_0950 Rhodopseudomonas palustris BisB5 arginase YP_568089.1 1067544 R 316057 CDS YP_568090.1 91975431 4021426 complement(1068569..1069729) 1 NC_007958.1 hypothetical protein 1069729 4021426 RPD_0951 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568090.1 1068569 R 316057 CDS YP_568091.1 91975432 4021427 complement(1069761..1072277) 1 NC_007958.1 glycogen/starch/alpha-glucan phosphorylase 1072277 4021427 RPD_0952 Rhodopseudomonas palustris BisB5 glycogen/starch/alpha-glucan phosphorylase YP_568091.1 1069761 R 316057 CDS YP_568092.1 91975433 4021428 1072619..1073110 1 NC_007958.1 hypothetical protein 1073110 4021428 RPD_0953 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568092.1 1072619 D 316057 CDS YP_568093.1 91975434 4021429 complement(1073259..1074062) 1 NC_007958.1 hypothetical protein 1074062 4021429 RPD_0954 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568093.1 1073259 R 316057 CDS YP_568094.1 91975435 4021430 complement(1074158..1074721) 1 NC_007958.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1074721 pyrE 4021430 pyrE Rhodopseudomonas palustris BisB5 orotate phosphoribosyltransferase YP_568094.1 1074158 R 316057 CDS YP_568095.1 91975436 4021431 complement(1075040..1078141) 1 NC_007958.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 1078141 4021431 RPD_0956 Rhodopseudomonas palustris BisB5 DNA polymerase I YP_568095.1 1075040 R 316057 CDS YP_568096.1 91975437 4021432 1078286..1078879 1 NC_007958.1 hypothetical protein 1078879 4021432 RPD_0957 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568096.1 1078286 D 316057 CDS YP_568097.1 91975438 4021433 complement(1079016..1081850) 1 NC_007958.1 undetermined function; putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase 1081850 4021433 RPD_0958 Rhodopseudomonas palustris BisB5 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase YP_568097.1 1079016 R 316057 CDS YP_568098.1 91975439 4021434 complement(1081847..1086856) 1 NC_007958.1 pyruvate flavodoxin/ferredoxin oxidoreductase-like 1086856 4021434 RPD_0959 Rhodopseudomonas palustris BisB5 pyruvate flavodoxin/ferredoxin oxidoreductase-like YP_568098.1 1081847 R 316057 CDS YP_568099.1 91975440 4021435 1087300..1087869 1 NC_007958.1 hypothetical protein 1087869 4021435 RPD_0960 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568099.1 1087300 D 316057 CDS YP_568100.1 91975441 4021436 1088152..1089153 1 NC_007958.1 hypothetical protein 1089153 4021436 RPD_0961 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568100.1 1088152 D 316057 CDS YP_568101.1 91975442 4021437 1089503..1090294 1 NC_007958.1 molybdate transport repressor 1090294 4021437 RPD_0962 Rhodopseudomonas palustris BisB5 molybdate transport repressor YP_568101.1 1089503 D 316057 CDS YP_568102.1 91975443 4021438 1090327..1091097 1 NC_007958.1 molybdenum ABC transporter periplasmic molybdate-binding protein 1091097 4021438 RPD_0963 Rhodopseudomonas palustris BisB5 molybdenum ABC transporter periplasmic molybdate-binding protein YP_568102.1 1090327 D 316057 CDS YP_568103.1 91975444 4021439 1091145..1091834 1 NC_007958.1 molybdate ABC transporter permease 1091834 4021439 RPD_0964 Rhodopseudomonas palustris BisB5 molybdate ABC transporter permease YP_568103.1 1091145 D 316057 CDS YP_568104.1 91975445 4021440 1091831..1092961 1 NC_007958.1 molybdate ABC transporter ATP-binding protein 1092961 4021440 RPD_0965 Rhodopseudomonas palustris BisB5 molybdate ABC transporter ATP-binding protein YP_568104.1 1091831 D 316057 CDS YP_568105.1 91975446 4021441 1093118..1093732 1 NC_007958.1 hypothetical protein 1093732 4021441 RPD_0966 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568105.1 1093118 D 316057 CDS YP_568106.1 91975447 4021442 complement(1093705..1094670) 1 NC_007958.1 hypothetical protein 1094670 4021442 RPD_0967 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568106.1 1093705 R 316057 CDS YP_568107.1 91975448 4021443 1094912..1096666 1 NC_007958.1 TPR repeat-containing protein 1096666 4021443 RPD_0968 Rhodopseudomonas palustris BisB5 TPR repeat-containing protein YP_568107.1 1094912 D 316057 CDS YP_568108.1 91975449 4021444 1096707..1101167 1 NC_007958.1 cytochrome P450-like protein 1101167 4021444 RPD_0969 Rhodopseudomonas palustris BisB5 cytochrome P450-like protein YP_568108.1 1096707 D 316057 CDS YP_568109.1 91975450 4021445 complement(1101431..1102207) 1 NC_007958.1 hypothetical protein 1102207 4021445 RPD_0970 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568109.1 1101431 R 316057 CDS YP_568110.1 91975451 4021446 1102365..1102943 1 NC_007958.1 sigma-70 region 2 1102943 4021446 RPD_0971 Rhodopseudomonas palustris BisB5 sigma-70 region 2 YP_568110.1 1102365 D 316057 CDS YP_568111.1 91975452 4021447 1102940..1103692 1 NC_007958.1 hypothetical protein 1103692 4021447 RPD_0972 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568111.1 1102940 D 316057 CDS YP_568112.1 91975453 4021448 complement(1103885..1104619) 1 NC_007958.1 hypothetical protein 1104619 4021448 RPD_0973 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568112.1 1103885 R 316057 CDS YP_568113.1 91975454 4021449 complement(1104767..1105054) 1 NC_007958.1 hypothetical protein 1105054 4021449 RPD_0974 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568113.1 1104767 R 316057 CDS YP_568114.1 91975455 4021450 complement(1105259..1106032) 1 NC_007958.1 hypothetical protein 1106032 4021450 RPD_0975 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568114.1 1105259 R 316057 CDS YP_568115.1 91975456 4021451 complement(1106128..1107099) 1 NC_007958.1 2-nitropropane dioxygenase 1107099 4021451 RPD_0976 Rhodopseudomonas palustris BisB5 2-nitropropane dioxygenase YP_568115.1 1106128 R 316057 CDS YP_568116.1 91975457 4021452 complement(1107234..1107872) 1 NC_007958.1 hypothetical protein 1107872 4021452 RPD_0977 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568116.1 1107234 R 316057 CDS YP_568117.1 91975458 4021453 complement(1107916..1108497) 1 NC_007958.1 DedA family protein 1108497 4021453 RPD_0978 Rhodopseudomonas palustris BisB5 DedA family protein YP_568117.1 1107916 R 316057 CDS YP_568118.1 91975459 4021454 complement(1108568..1108987) 1 NC_007958.1 phosphoribosyl-ATP pyrophosphohydrolase 1108987 4021454 RPD_0979 Rhodopseudomonas palustris BisB5 phosphoribosyl-ATP pyrophosphohydrolase YP_568118.1 1108568 R 316057 CDS YP_568119.1 91975460 4021455 complement(1109088..1109492) 1 NC_007958.1 hypothetical protein 1109492 4021455 RPD_0980 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568119.1 1109088 R 316057 CDS YP_568120.1 91975461 4021456 complement(1109663..1110622) 1 NC_007958.1 oxidoreductase-like protein 1110622 4021456 RPD_0981 Rhodopseudomonas palustris BisB5 oxidoreductase-like protein YP_568120.1 1109663 R 316057 CDS YP_568121.1 91975462 4021457 complement(1110624..1111478) 1 NC_007958.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit beta 1111478 4021457 RPD_0982 Rhodopseudomonas palustris BisB5 protocatechuate 4,5-dioxygenase subunit beta YP_568121.1 1110624 R 316057 CDS YP_568122.1 91975463 4021458 complement(1111478..1111867) 1 NC_007958.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit alpha 1111867 4021458 RPD_0983 Rhodopseudomonas palustris BisB5 protocatechuate 4,5-dioxygenase subunit alpha YP_568122.1 1111478 R 316057 CDS YP_568123.1 91975464 4021459 complement(1111929..1112912) 1 NC_007958.1 amidohydrolase 2 1112912 4021459 RPD_0984 Rhodopseudomonas palustris BisB5 amidohydrolase 2 YP_568123.1 1111929 R 316057 CDS YP_568124.1 91975465 4021460 complement(1113020..1113232) 1 NC_007958.1 putative dehydrogenase 1113232 4021460 RPD_0985 Rhodopseudomonas palustris BisB5 putative dehydrogenase YP_568124.1 1113020 R 316057 CDS YP_568125.1 91975466 4021461 complement(1113232..1113927) 1 NC_007958.1 hypothetical protein 1113927 4021461 RPD_0986 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568125.1 1113232 R 316057 CDS YP_568126.1 91975467 4021462 complement(1113942..1114970) 1 NC_007958.1 amidohydrolase 2 1114970 4021462 RPD_0987 Rhodopseudomonas palustris BisB5 amidohydrolase 2 YP_568126.1 1113942 R 316057 CDS YP_568127.1 91975468 4021463 complement(1114980..1116143) 1 NC_007958.1 hypothetical protein 1116143 4021463 RPD_0988 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568127.1 1114980 R 316057 CDS YP_568128.1 91975469 4021464 complement(1116246..1117148) 1 NC_007958.1 LysR, substrate-binding 1117148 4021464 RPD_0989 Rhodopseudomonas palustris BisB5 LysR, substrate-binding YP_568128.1 1116246 R 316057 CDS YP_568129.1 91975470 4021465 complement(1117173..1118171) 1 NC_007958.1 twin-arginine translocation pathway signal 1118171 4021465 RPD_0990 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_568129.1 1117173 R 316057 CDS YP_568130.1 91975471 4021466 1118359..1119522 1 NC_007958.1 NADH:flavin oxidoreductase/NADH oxidase 1119522 4021466 RPD_0991 Rhodopseudomonas palustris BisB5 NADH:flavin oxidoreductase/NADH oxidase YP_568130.1 1118359 D 316057 CDS YP_568131.1 91975472 4021467 complement(1119621..1119992) 1 NC_007958.1 hypothetical protein 1119992 4021467 RPD_0992 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568131.1 1119621 R 316057 CDS YP_568132.1 91975473 4021468 1119993..1120271 1 NC_007958.1 hypothetical protein 1120271 4021468 RPD_0993 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568132.1 1119993 D 316057 CDS YP_568133.1 91975474 4021469 complement(1120290..1122260) 1 NC_007958.1 chemotaxis sensory transducer 1122260 4021469 RPD_0994 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_568133.1 1120290 R 316057 CDS YP_568134.1 91975475 4021470 complement(1123124..1125094) 1 NC_007958.1 chemotaxis sensory transducer 1125094 4021470 RPD_0995 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_568134.1 1123124 R 316057 CDS YP_568135.1 91975476 4021471 1125728..1126186 1 NC_007958.1 hypothetical protein 1126186 4021471 RPD_0996 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568135.1 1125728 D 316057 CDS YP_568136.1 91975477 4021472 1126348..1126947 1 NC_007958.1 electron transport protein SCO1/SenC 1126947 4021472 RPD_0997 Rhodopseudomonas palustris BisB5 electron transport protein SCO1/SenC YP_568136.1 1126348 D 316057 CDS YP_568137.1 91975478 4021473 complement(1126892..1128952) 1 NC_007958.1 glycosyl transferase family protein 1128952 4021473 RPD_0998 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_568137.1 1126892 R 316057 CDS YP_568138.1 91975479 4021474 1129029..1129943 1 NC_007958.1 extracellular solute-binding protein 1129943 4021474 RPD_0999 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_568138.1 1129029 D 316057 CDS YP_568139.1 91975480 4021475 1129985..1131622 1 NC_007958.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 1131622 lysK 4021475 lysK Rhodopseudomonas palustris BisB5 lysyl-tRNA synthetase YP_568139.1 1129985 D 316057 CDS YP_568140.1 91975481 4021476 1131912..1132166 1 NC_007958.1 hypothetical protein 1132166 4021476 RPD_1001 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568140.1 1131912 D 316057 CDS YP_568141.1 91975482 4021477 complement(1132406..1133329) 1 NC_007958.1 secretion protein HlyD 1133329 4021477 RPD_1002 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_568141.1 1132406 R 316057 CDS YP_568142.1 91975483 4021478 complement(1133479..1136118) 1 NC_007958.1 adenylyl cyclase class-3/4/guanylyl cyclase 1136118 4021478 RPD_1003 Rhodopseudomonas palustris BisB5 adenylyl cyclase class-3/4/guanylyl cyclase YP_568142.1 1133479 R 316057 CDS YP_568143.1 91975484 4021479 complement(1136218..1138167) 1 NC_007958.1 AsmA 1138167 4021479 RPD_1004 Rhodopseudomonas palustris BisB5 AsmA YP_568143.1 1136218 R 316057 CDS YP_568144.1 91975485 4021480 1138441..1139121 1 NC_007958.1 cyclic nucleotide-binding protein 1139121 4021480 RPD_1005 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_568144.1 1138441 D 316057 CDS YP_568145.1 91975486 4021481 complement(1139834..1143010) 1 NC_007958.1 acriflavin resistance protein 1143010 4021481 RPD_1006 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_568145.1 1139834 R 316057 CDS YP_568146.1 91975487 4021482 complement(1143010..1143963) 1 NC_007958.1 secretion protein HlyD 1143963 4021482 RPD_1007 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_568146.1 1143010 R 316057 CDS YP_568147.1 91975488 4021483 complement(1144180..1144818) 1 NC_007958.1 OmpA/MotB 1144818 4021483 RPD_1008 Rhodopseudomonas palustris BisB5 OmpA/MotB YP_568147.1 1144180 R 316057 CDS YP_568148.1 91975489 4021484 complement(1144956..1146542) 1 NC_007958.1 peptidase C14, caspase catalytic subunit p20 1146542 4021484 RPD_1009 Rhodopseudomonas palustris BisB5 peptidase C14, caspase catalytic subunit p20 YP_568148.1 1144956 R 316057 CDS YP_568149.1 91975490 4021485 1146560..1147246 1 NC_007958.1 hypothetical protein 1147246 4021485 RPD_1010 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568149.1 1146560 D 316057 CDS YP_568150.1 91975491 4021486 complement(1147362..1149518) 1 NC_007958.1 peptidase C14, caspase catalytic subunit p20 1149518 4021486 RPD_1011 Rhodopseudomonas palustris BisB5 peptidase C14, caspase catalytic subunit p20 YP_568150.1 1147362 R 316057 CDS YP_568151.1 91975492 4021487 complement(1149700..1150353) 1 NC_007958.1 OmpA/MotB 1150353 4021487 RPD_1012 Rhodopseudomonas palustris BisB5 OmpA/MotB YP_568151.1 1149700 R 316057 CDS YP_568152.1 91975493 4021488 1150835..1152772 1 NC_007958.1 outer membrane autotransporter barrel domain-containing protein 1152772 4021488 RPD_1013 Rhodopseudomonas palustris BisB5 outer membrane autotransporter barrel domain-containing protein YP_568152.1 1150835 D 316057 CDS YP_568153.1 91975494 4021489 complement(1153002..1153514) 1 NC_007958.1 regulatory protein MarR 1153514 4021489 RPD_1014 Rhodopseudomonas palustris BisB5 regulatory protein MarR YP_568153.1 1153002 R 316057 CDS YP_568154.1 91975495 4021490 1153643..1155265 1 NC_007958.1 FAD-dependent oxidoreductase 1155265 4021490 RPD_1015 Rhodopseudomonas palustris BisB5 FAD-dependent oxidoreductase YP_568154.1 1153643 D 316057 CDS YP_568155.1 91975496 4021491 1155262..1155477 1 NC_007958.1 hypothetical protein 1155477 4021491 RPD_1016 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568155.1 1155262 D 316057 CDS YP_568156.1 91975497 4021492 1155606..1156556 1 NC_007958.1 beta-lactamase-like protein 1156556 4021492 RPD_1017 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_568156.1 1155606 D 316057 CDS YP_568157.1 91975498 4021493 1156630..1157976 1 NC_007958.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 1157976 4021493 RPD_1018 Rhodopseudomonas palustris BisB5 homogentisate 1,2-dioxygenase YP_568157.1 1156630 D 316057 CDS YP_568158.1 91975499 4021494 1157973..1158629 1 NC_007958.1 maleylacetoacetate isomerase 1158629 4021494 RPD_1019 Rhodopseudomonas palustris BisB5 maleylacetoacetate isomerase YP_568158.1 1157973 D 316057 CDS YP_568159.1 91975500 4021495 1158692..1159960 1 NC_007958.1 fumarylacetoacetase 1159960 4021495 RPD_1020 Rhodopseudomonas palustris BisB5 fumarylacetoacetase YP_568159.1 1158692 D 316057 CDS YP_568160.1 91975501 4021496 complement(1160103..1161218) 1 NC_007958.1 L-carnitine dehydratase/bile acid-inducible protein F 1161218 4021496 RPD_1021 Rhodopseudomonas palustris BisB5 L-carnitine dehydratase/bile acid-inducible protein F YP_568160.1 1160103 R 316057 CDS YP_568161.1 91975502 4021497 complement(1161406..1162206) 1 NC_007958.1 carbon-monoxide dehydrogenase 1162206 4021497 RPD_1022 Rhodopseudomonas palustris BisB5 carbon-monoxide dehydrogenase YP_568161.1 1161406 R 316057 CDS YP_568162.1 91975503 4021498 complement(1162221..1164566) 1 NC_007958.1 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 1164566 4021498 RPD_1023 Rhodopseudomonas palustris BisB5 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_568162.1 1162221 R 316057 CDS YP_568163.1 91975504 4021499 complement(1164668..1165165) 1 NC_007958.1 (2Fe-2S)-binding protein 1165165 4021499 RPD_1024 Rhodopseudomonas palustris BisB5 (2Fe-2S)-binding protein YP_568163.1 1164668 R 316057 CDS YP_568164.1 91975505 4021500 1165417..1167462 1 NC_007958.1 methyl-accepting chemotaxis sensory transducer 1167462 4021500 RPD_1025 Rhodopseudomonas palustris BisB5 methyl-accepting chemotaxis sensory transducer YP_568164.1 1165417 D 316057 CDS YP_568165.1 91975506 4021501 1167625..1169109 1 NC_007958.1 major facilitator transporter 1169109 4021501 RPD_1026 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_568165.1 1167625 D 316057 CDS YP_568166.1 91975507 4021502 1169106..1169915 1 NC_007958.1 HAD family hydrolase 1169915 4021502 RPD_1027 Rhodopseudomonas palustris BisB5 HAD family hydrolase YP_568166.1 1169106 D 316057 CDS YP_568167.1 91975508 4021503 1170038..1171522 1 NC_007958.1 Alpha,alpha-trehalose-phosphate synthase 1171522 4021503 RPD_1028 Rhodopseudomonas palustris BisB5 Alpha,alpha-trehalose-phosphate synthase YP_568167.1 1170038 D 316057 CDS YP_568168.1 91975509 4021505 1172349..1175543 1 NC_007958.1 CRISPR-associated Cas5e family protein 1175543 4021505 RPD_1029 Rhodopseudomonas palustris BisB5 CRISPR-associated Cas5e family protein YP_568168.1 1172349 D 316057 CDS YP_568169.1 91975510 4021506 1175519..1176418 1 NC_007958.1 CRISPR-associated Cas1 family protein 1176418 4021506 RPD_1030 Rhodopseudomonas palustris BisB5 CRISPR-associated Cas1 family protein YP_568169.1 1175519 D 316057 CDS YP_568170.1 91975511 4021507 1180230..1182329 1 NC_007958.1 CoA-binding protein 1182329 4021507 RPD_1031 Rhodopseudomonas palustris BisB5 CoA-binding protein YP_568170.1 1180230 D 316057 CDS YP_568171.1 91975512 4021508 1182373..1183398 1 NC_007958.1 extracellular solute-binding protein 1183398 4021508 RPD_1032 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_568171.1 1182373 D 316057 CDS YP_568172.1 91975513 4021509 1183478..1185130 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 1185130 4021509 RPD_1033 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_568172.1 1183478 D 316057 CDS YP_568173.1 91975514 4021510 1185127..1186206 1 NC_007958.1 spermidine/putrescine ABC transporter ATP-binding subunit 1186206 4021510 RPD_1034 Rhodopseudomonas palustris BisB5 spermidine/putrescine ABC transporter ATP-binding subunit YP_568173.1 1185127 D 316057 CDS YP_568174.1 91975515 4021511 1186203..1187873 1 NC_007958.1 FAD dependent oxidoreductase 1187873 4021511 RPD_1035 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_568174.1 1186203 D 316057 CDS YP_568175.1 91975516 4021512 1187873..1189414 1 NC_007958.1 FAD linked oxidase-like protein 1189414 4021512 RPD_1036 Rhodopseudomonas palustris BisB5 FAD linked oxidase-like protein YP_568175.1 1187873 D 316057 CDS YP_568176.1 91975517 4021513 1189411..1190853 1 NC_007958.1 carbohydrate kinase 1190853 4021513 RPD_1037 Rhodopseudomonas palustris BisB5 carbohydrate kinase YP_568176.1 1189411 D 316057 CDS YP_568177.1 91975518 4021514 1191002..1191637 1 NC_007958.1 regulatory protein TetR 1191637 4021514 RPD_1038 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_568177.1 1191002 D 316057 CDS YP_568178.1 91975519 4021515 complement(1191683..1192561) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 1192561 4021515 RPD_1039 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568178.1 1191683 R 316057 CDS YP_568179.1 91975520 4021516 1192949..1193650 1 NC_007958.1 hypothetical protein 1193650 4021516 RPD_1040 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568179.1 1192949 D 316057 CDS YP_568180.1 91975521 4021517 complement(1193675..1194172) 1 NC_007958.1 regulatory protein MarR 1194172 4021517 RPD_1041 Rhodopseudomonas palustris BisB5 regulatory protein MarR YP_568180.1 1193675 R 316057 CDS YP_568181.1 91975522 4021518 1194277..1195464 1 NC_007958.1 putative nitrile hydratase regulator 1195464 4021518 RPD_1042 Rhodopseudomonas palustris BisB5 putative nitrile hydratase regulator YP_568181.1 1194277 D 316057 CDS YP_568182.1 91975523 4021519 1195621..1197135 1 NC_007958.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1197135 4021519 RPD_1043 Rhodopseudomonas palustris BisB5 amidase YP_568182.1 1195621 D 316057 CDS YP_568183.1 91975524 4021520 1197179..1198036 1 NC_007958.1 inner-membrane translocator 1198036 4021520 RPD_1044 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568183.1 1197179 D 316057 CDS YP_568184.1 91975525 4021521 1198041..1199264 1 NC_007958.1 twin-arginine translocation pathway signal 1199264 4021521 RPD_1045 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_568184.1 1198041 D 316057 CDS YP_568185.1 91975526 4021522 1199326..1200384 1 NC_007958.1 inner-membrane translocator 1200384 4021522 RPD_1046 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568185.1 1199326 D 316057 CDS YP_568186.1 91975527 4021523 1200371..1201105 1 NC_007958.1 ABC transporter-like protein 1201105 4021523 RPD_1047 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568186.1 1200371 D 316057 CDS YP_568187.1 91975528 4021524 1201098..1201799 1 NC_007958.1 ABC transporter-like protein 1201799 4021524 RPD_1048 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568187.1 1201098 D 316057 CDS YP_568188.1 91975529 4021525 1201968..1203212 1 NC_007958.1 iron-containing alcohol dehydrogenase 1203212 4021525 RPD_1049 Rhodopseudomonas palustris BisB5 iron-containing alcohol dehydrogenase YP_568188.1 1201968 D 316057 CDS YP_568189.1 91975530 4021526 1203422..1204459 1 NC_007958.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1204459 4021526 RPD_1050 Rhodopseudomonas palustris BisB5 fructose-1,6-bisphosphatase YP_568189.1 1203422 D 316057 CDS YP_568190.1 91975531 4021527 1204488..1205363 1 NC_007958.1 phosphoribulokinase 1205363 4021527 RPD_1051 Rhodopseudomonas palustris BisB5 phosphoribulokinase YP_568190.1 1204488 D 316057 CDS YP_568191.1 91975532 4021528 1205398..1207413 1 NC_007958.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1207413 4021528 RPD_1052 Rhodopseudomonas palustris BisB5 transketolase YP_568191.1 1205398 D 316057 CDS YP_568192.1 91975533 4021529 1207471..1208556 1 NC_007958.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 1208556 4021529 RPD_1053 Rhodopseudomonas palustris BisB5 fructose-1,6-bisphosphate aldolase YP_568192.1 1207471 D 316057 CDS YP_568193.1 91975534 4021530 1208614..1209999 1 NC_007958.1 catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation; ribulose bisphosphate carboxylase 1209999 4021530 RPD_1054 Rhodopseudomonas palustris BisB5 ribulose bisphosphate carboxylase YP_568193.1 1208614 D 316057 CDS YP_568194.1 91975535 4021531 1210250..1210546 1 NC_007958.1 hypothetical protein 1210546 4021531 RPD_1055 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568194.1 1210250 D 316057 CDS YP_568195.1 91975536 4021532 complement(1210576..1210803) 1 NC_007958.1 hypothetical protein 1210803 4021532 RPD_1056 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568195.1 1210576 R 316057 CDS YP_568196.1 91975537 4021533 1211163..1211444 1 NC_007958.1 hypothetical protein 1211444 4021533 RPD_1057 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568196.1 1211163 D 316057 CDS YP_568197.1 91975538 4021534 1211455..1213335 1 NC_007958.1 ferrous iron transport protein B 1213335 4021534 RPD_1058 Rhodopseudomonas palustris BisB5 ferrous iron transport protein B YP_568197.1 1211455 D 316057 CDS YP_568198.1 91975539 4021535 complement(1213345..1214199) 1 NC_007958.1 hypothetical protein 1214199 4021535 RPD_1059 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568198.1 1213345 R 316057 CDS YP_568199.1 91975540 4021536 1214455..1215393 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 1215393 4021536 RPD_1060 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568199.1 1214455 D 316057 CDS YP_568200.1 91975541 4021537 1215686..1217434 1 NC_007958.1 transcriptional regulator NifA 1217434 4021537 RPD_1061 Rhodopseudomonas palustris BisB5 transcriptional regulator NifA YP_568200.1 1215686 D 316057 CDS YP_568201.1 91975542 4021538 1217618..1217812 1 NC_007958.1 4Fe-4S ferredoxin 1217812 4021538 RPD_1062 Rhodopseudomonas palustris BisB5 4Fe-4S ferredoxin YP_568201.1 1217618 D 316057 CDS YP_568202.1 91975543 4021539 1218030..1219589 1 NC_007958.1 nitrogenase cofactor biosynthesis protein NifB 1219589 4021539 RPD_1063 Rhodopseudomonas palustris BisB5 nitrogenase cofactor biosynthesis protein NifB YP_568202.1 1218030 D 316057 CDS YP_568203.1 91975544 4021540 1219613..1219834 1 NC_007958.1 4Fe-4S ferredoxin 1219834 4021540 RPD_1064 Rhodopseudomonas palustris BisB5 4Fe-4S ferredoxin YP_568203.1 1219613 D 316057 CDS YP_568204.1 91975545 4021541 1219844..1220200 1 NC_007958.1 hypothetical protein 1220200 4021541 RPD_1065 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568204.1 1219844 D 316057 CDS YP_568205.1 91975546 4021542 1220202..1220741 1 NC_007958.1 hypothetical protein 1220741 4021542 RPD_1066 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568205.1 1220202 D 316057 CDS YP_568206.1 91975547 4021543 1220731..1221537 1 NC_007958.1 LRV FeS4 cluster 1221537 4021543 RPD_1067 Rhodopseudomonas palustris BisB5 LRV FeS4 cluster YP_568206.1 1220731 D 316057 CDS YP_568207.1 91975548 4021544 1221534..1221833 1 NC_007958.1 NifZ 1221833 4021544 RPD_1068 Rhodopseudomonas palustris BisB5 NifZ YP_568207.1 1221534 D 316057 CDS YP_568208.1 91975549 4021545 1221833..1222090 1 NC_007958.1 hypothetical protein 1222090 4021545 RPD_1069 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568208.1 1221833 D 316057 CDS YP_568209.1 91975550 4021546 1222103..1222312 1 NC_007958.1 NifT/FixU 1222312 4021546 RPD_1070 Rhodopseudomonas palustris BisB5 NifT/FixU YP_568209.1 1222103 D 316057 CDS YP_568210.1 91975551 4021547 1222315..1222602 1 NC_007958.1 hypothetical protein 1222602 4021547 RPD_1071 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568210.1 1222315 D 316057 CDS YP_568211.1 91975552 4021548 1222614..1223516 1 NC_007958.1 hypothetical protein 1223516 4021548 RPD_1072 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568211.1 1222614 D 316057 CDS YP_568212.1 91975553 4021549 1224040..1224939 1 NC_007958.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 1224939 nifH 4021549 nifH Rhodopseudomonas palustris BisB5 nitrogenase reductase YP_568212.1 1224040 D 316057 CDS YP_568213.1 91975554 4021550 1225007..1226470 1 NC_007958.1 nitrogenase molybdenum-iron protein alpha chain 1226470 4021550 RPD_1074 Rhodopseudomonas palustris BisB5 nitrogenase molybdenum-iron protein alpha chain YP_568213.1 1225007 D 316057 CDS YP_568214.1 91975555 4021551 1226508..1228121 1 NC_007958.1 nitrogenase molybdenum-iron protein beta chain 1228121 4021551 RPD_1075 Rhodopseudomonas palustris BisB5 nitrogenase molybdenum-iron protein beta chain YP_568214.1 1226508 D 316057 CDS YP_568215.1 91975556 4021552 1228173..1229639 1 NC_007958.1 functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifE 1229639 4021552 RPD_1076 Rhodopseudomonas palustris BisB5 nitrogenase molybdenum-cofactor biosynthesis protein NifE YP_568215.1 1228173 D 316057 CDS YP_568216.1 91975557 4021553 1229641..1231017 1 NC_007958.1 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 1231017 4021553 RPD_1077 Rhodopseudomonas palustris BisB5 nitrogenase molybdenum-cofactor biosynthesis protein NifN YP_568216.1 1229641 D 316057 CDS YP_568217.1 91975558 4021554 1231064..1231462 1 NC_007958.1 dinitrogenase iron-molybdenum cofactor biosynthesis 1231462 4021554 RPD_1078 Rhodopseudomonas palustris BisB5 dinitrogenase iron-molybdenum cofactor biosynthesis YP_568217.1 1231064 D 316057 CDS YP_568218.1 91975559 4021555 1231464..1231931 1 NC_007958.1 hypothetical protein 1231931 4021555 RPD_1079 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568218.1 1231464 D 316057 CDS YP_568219.1 91975560 4021556 1231943..1232149 1 NC_007958.1 hypothetical protein 1232149 4021556 RPD_1080 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568219.1 1231943 D 316057 CDS YP_568220.1 91975561 4021557 1232219..1232533 1 NC_007958.1 4Fe-4S ferredoxin 1232533 4021557 RPD_1081 Rhodopseudomonas palustris BisB5 4Fe-4S ferredoxin YP_568220.1 1232219 D 316057 CDS YP_568221.1 91975562 4021558 1232570..1233277 1 NC_007958.1 NifQ 1233277 4021558 RPD_1082 Rhodopseudomonas palustris BisB5 NifQ YP_568221.1 1232570 D 316057 CDS YP_568222.1 91975563 4021559 1233688..1234008 1 NC_007958.1 hypothetical protein 1234008 4021559 RPD_1083 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568222.1 1233688 D 316057 CDS YP_568223.1 91975564 4021560 1234037..1235032 1 NC_007958.1 nitrogen-fixing NifU-like protein 1235032 4021560 RPD_1084 Rhodopseudomonas palustris BisB5 nitrogen-fixing NifU-like protein YP_568223.1 1234037 D 316057 CDS YP_568224.1 91975565 4021561 1235029..1236252 1 NC_007958.1 class V aminotransferase 1236252 4021561 RPD_1085 Rhodopseudomonas palustris BisB5 class V aminotransferase YP_568224.1 1235029 D 316057 CDS YP_568225.1 91975566 4021562 1236245..1237429 1 NC_007958.1 Alpha-isopropylmalate/homocitrate synthase 1237429 4021562 RPD_1086 Rhodopseudomonas palustris BisB5 Alpha-isopropylmalate/homocitrate synthase YP_568225.1 1236245 D 316057 CDS YP_568226.1 91975567 4021563 1237476..1237832 1 NC_007958.1 associates with NifD and may protect the nitrogenase Fe-Mo protein from oxidative damage; nitrogenase stabilizing/protective protein 1237832 nifW 4021563 nifW Rhodopseudomonas palustris BisB5 nitrogenase stabilizing/protective protein YP_568226.1 1237476 D 316057 CDS YP_568227.1 91975568 4021564 1238139..1238984 1 NC_007958.1 electron transfer flavoprotein subunit beta 1238984 4021564 RPD_1088 Rhodopseudomonas palustris BisB5 electron transfer flavoprotein subunit beta YP_568227.1 1238139 D 316057 CDS YP_568228.1 91975569 4021565 1239009..1240115 1 NC_007958.1 electron transfer flavoprotein subunit beta 1240115 4021565 RPD_1089 Rhodopseudomonas palustris BisB5 electron transfer flavoprotein subunit beta YP_568228.1 1239009 D 316057 CDS YP_568229.1 91975570 4021566 1240127..1241434 1 NC_007958.1 electron-transferring-flavoprotein dehydrogenase 1241434 4021566 RPD_1090 Rhodopseudomonas palustris BisB5 electron-transferring-flavoprotein dehydrogenase YP_568229.1 1240127 D 316057 CDS YP_568230.1 91975571 4021567 1241475..1241771 1 NC_007958.1 ferredoxin like protein, fixX 1241771 4021567 RPD_1091 Rhodopseudomonas palustris BisB5 ferredoxin like protein, fixX YP_568230.1 1241475 D 316057 CDS YP_568231.1 91975572 4021568 complement(1241852..1242436) 1 NC_007958.1 hypothetical protein 1242436 4021568 RPD_1092 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568231.1 1241852 R 316057 CDS YP_568232.1 91975573 4021569 complement(1242666..1243121) 1 NC_007958.1 hypothetical protein 1243121 4021569 RPD_1093 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568232.1 1242666 R 316057 CDS YP_568233.1 91975574 4021570 complement(1243203..1243475) 1 NC_007958.1 hypothetical protein 1243475 4021570 RPD_1094 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568233.1 1243203 R 316057 CDS YP_568234.1 91975575 4021571 1243833..1245059 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 1245059 4021571 RPD_1095 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_568234.1 1243833 D 316057 CDS YP_568235.1 91975576 4021572 1245095..1246033 1 NC_007958.1 hypothetical protein 1246033 4021572 RPD_1096 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568235.1 1245095 D 316057 CDS YP_568236.1 91975577 4021573 complement(1246110..1246841) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 1246841 4021573 RPD_1097 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568236.1 1246110 R 316057 CDS YP_568237.1 91975578 4021574 complement(1246834..1248216) 1 NC_007958.1 AMP-dependent synthetase and ligase 1248216 4021574 RPD_1098 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_568237.1 1246834 R 316057 CDS YP_568238.1 91975579 4021575 complement(1248203..1248418) 1 NC_007958.1 putative acyl carrier protein 1248418 4021575 RPD_1099 Rhodopseudomonas palustris BisB5 putative acyl carrier protein YP_568238.1 1248203 R 316057 CDS YP_568239.1 91975580 4021576 1248553..1249428 1 NC_007958.1 hypothetical protein 1249428 4021576 RPD_1100 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568239.1 1248553 D 316057 CDS YP_568240.1 91975581 4021577 1249468..1251147 1 NC_007958.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; thiamine pyrophosphate protein 1251147 4021577 RPD_1101 Rhodopseudomonas palustris BisB5 thiamine pyrophosphate protein YP_568240.1 1249468 D 316057 CDS YP_568241.1 91975582 4021578 complement(1251875..1252747) 1 NC_007958.1 aminotransferase 1252747 4021578 RPD_1102 Rhodopseudomonas palustris BisB5 aminotransferase YP_568241.1 1251875 R 316057 CDS YP_568242.1 91975583 4021579 complement(1252825..1254717) 1 NC_007958.1 activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase 1254717 4021579 RPD_1103 Rhodopseudomonas palustris BisB5 long-chain-acyl-CoA synthetase YP_568242.1 1252825 R 316057 CDS YP_568243.1 91975584 4021580 1254918..1256222 1 NC_007958.1 O-acetylhomoserine/O-acetylserine sulfhydrylase 1256222 4021580 RPD_1104 Rhodopseudomonas palustris BisB5 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_568243.1 1254918 D 316057 CDS YP_568244.1 91975585 4021581 1256238..1257239 1 NC_007958.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 1257239 4021581 RPD_1105 Rhodopseudomonas palustris BisB5 homoserine O-succinyltransferase YP_568244.1 1256238 D 316057 CDS YP_568245.1 91975586 4021582 1257236..1257757 1 NC_007958.1 flavin reductase-like FMN-binding protein 1257757 4021582 RPD_1106 Rhodopseudomonas palustris BisB5 flavin reductase-like FMN-binding protein YP_568245.1 1257236 D 316057 CDS YP_568246.1 91975587 4021583 complement(1257847..1259199) 1 NC_007958.1 putative membrane protein involved in export of O-antigen 1259199 4021583 RPD_1107 Rhodopseudomonas palustris BisB5 putative membrane protein involved in export of O-antigen YP_568246.1 1257847 R 316057 CDS YP_568247.1 91975588 4021584 1259464..1259823 1 NC_007958.1 hypothetical protein 1259823 4021584 RPD_1108 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568247.1 1259464 D 316057 CDS YP_568248.1 91975589 4021585 complement(1259840..1261360) 1 NC_007958.1 hypothetical protein 1261360 4021585 RPD_1109 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568248.1 1259840 R 316057 CDS YP_568249.1 91975590 4021586 complement(1261350..1262609) 1 NC_007958.1 group 1 glycosyl transferase 1262609 4021586 RPD_1110 Rhodopseudomonas palustris BisB5 group 1 glycosyl transferase YP_568249.1 1261350 R 316057 CDS YP_568250.1 91975591 4021587 1262993..1265059 1 NC_007958.1 lipopolysaccharide biosynthesis 1265059 4021587 RPD_1111 Rhodopseudomonas palustris BisB5 lipopolysaccharide biosynthesis YP_568250.1 1262993 D 316057 CDS YP_568251.1 91975592 4021588 1265056..1266393 1 NC_007958.1 hypothetical protein 1266393 4021588 RPD_1112 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568251.1 1265056 D 316057 CDS YP_568252.1 91975593 4021589 1266403..1267725 1 NC_007958.1 glycoside hydrolase family protein 1267725 4021589 RPD_1113 Rhodopseudomonas palustris BisB5 glycoside hydrolase family protein YP_568252.1 1266403 D 316057 CDS YP_568253.1 91975594 4021590 complement(1267829..1268749) 1 NC_007958.1 WecB/TagA/CpsF family glycosyl transferase 1268749 4021590 RPD_1114 Rhodopseudomonas palustris BisB5 WecB/TagA/CpsF family glycosyl transferase YP_568253.1 1267829 R 316057 CDS YP_568254.1 91975595 4021591 complement(1268995..1269975) 1 NC_007958.1 UDP-glucose 4-epimerase 1269975 4021591 RPD_1115 Rhodopseudomonas palustris BisB5 UDP-glucose 4-epimerase YP_568254.1 1268995 R 316057 CDS YP_568255.1 91975596 4021592 complement(1270021..1271262) 1 NC_007958.1 hypothetical protein 1271262 4021592 RPD_1116 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568255.1 1270021 R 316057 CDS YP_568256.1 91975597 4021593 1271529..1272494 1 NC_007958.1 hypothetical protein 1272494 4021593 RPD_1117 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568256.1 1271529 D 316057 CDS YP_568257.1 91975598 4021594 complement(1272545..1273624) 1 NC_007958.1 basic membrane lipoprotein 1273624 4021594 RPD_1118 Rhodopseudomonas palustris BisB5 basic membrane lipoprotein YP_568257.1 1272545 R 316057 CDS YP_568258.1 91975599 4021595 complement(1273702..1274619) 1 NC_007958.1 inner-membrane translocator 1274619 4021595 RPD_1119 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568258.1 1273702 R 316057 CDS YP_568259.1 91975600 4021596 complement(1274606..1275697) 1 NC_007958.1 inner-membrane translocator 1275697 4021596 RPD_1120 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568259.1 1274606 R 316057 CDS YP_568260.1 91975601 4021597 complement(1275681..1277300) 1 NC_007958.1 ABC transporter-like protein 1277300 4021597 RPD_1121 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568260.1 1275681 R 316057 CDS YP_568261.1 91975602 4021598 1277407..1277691 1 NC_007958.1 hypothetical protein 1277691 4021598 RPD_1122 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568261.1 1277407 D 316057 CDS YP_568262.1 91975603 4021599 1277927..1278352 1 NC_007958.1 hypothetical protein 1278352 4021599 RPD_1123 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568262.1 1277927 D 316057 CDS YP_568263.1 91975604 4021600 complement(1278477..1279868) 1 NC_007958.1 hypothetical protein 1279868 4021600 RPD_1124 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568263.1 1278477 R 316057 CDS YP_568264.1 91975605 4021601 1280398..1281267 1 NC_007958.1 hypothetical protein 1281267 4021601 RPD_1125 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568264.1 1280398 D 316057 CDS YP_568265.1 91975606 4021602 1281378..1282154 1 NC_007958.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 1282154 4021602 RPD_1126 Rhodopseudomonas palustris BisB5 enoyl-(acyl carrier protein) reductase YP_568265.1 1281378 D 316057 CDS YP_568266.1 91975607 4021603 1282175..1283593 1 NC_007958.1 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 1283593 4021603 RPD_1127 Rhodopseudomonas palustris BisB5 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_568266.1 1282175 D 316057 CDS YP_568267.1 91975608 4021604 1283590..1284795 1 NC_007958.1 acetate kinase 1284795 4021604 RPD_1128 Rhodopseudomonas palustris BisB5 acetate kinase YP_568267.1 1283590 D 316057 CDS YP_568268.1 91975609 4021605 complement(1284874..1285833) 1 NC_007958.1 phenylacetic acid degradation-like protein 1285833 4021605 RPD_1129 Rhodopseudomonas palustris BisB5 phenylacetic acid degradation-like protein YP_568268.1 1284874 R 316057 CDS YP_568269.1 91975610 4021606 1285923..1286240 1 NC_007958.1 hypothetical protein 1286240 4021606 RPD_1130 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568269.1 1285923 D 316057 CDS YP_568270.1 91975611 4021607 1286377..1287117 1 NC_007958.1 nuclease 1287117 4021607 RPD_1131 Rhodopseudomonas palustris BisB5 nuclease YP_568270.1 1286377 D 316057 CDS YP_568271.1 91975612 4021608 complement(1287132..1287926) 1 NC_007958.1 enoyl-CoA hydratase/isomerase 1287926 4021608 RPD_1132 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_568271.1 1287132 R 316057 CDS YP_568272.1 91975613 4021609 1288095..1289651 1 NC_007958.1 AMP-dependent synthetase and ligase 1289651 4021609 RPD_1133 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_568272.1 1288095 D 316057 CDS YP_568273.1 91975614 4021610 complement(1289667..1290608) 1 NC_007958.1 regulatory protein IclR 1290608 4021610 RPD_1134 Rhodopseudomonas palustris BisB5 regulatory protein IclR YP_568273.1 1289667 R 316057 CDS YP_568274.1 91975615 4021611 1290742..1291614 1 NC_007958.1 MaoC-like dehydratase 1291614 4021611 RPD_1135 Rhodopseudomonas palustris BisB5 MaoC-like dehydratase YP_568274.1 1290742 D 316057 CDS YP_568275.1 91975616 4021612 1291840..1293084 1 NC_007958.1 twin-arginine translocation pathway signal 1293084 4021612 RPD_1136 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_568275.1 1291840 D 316057 CDS YP_568276.1 91975617 4021613 1293092..1293811 1 NC_007958.1 ABC transporter-like protein 1293811 4021613 RPD_1137 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568276.1 1293092 D 316057 CDS YP_568277.1 91975618 4021614 1293804..1294508 1 NC_007958.1 ABC transporter-like protein 1294508 4021614 RPD_1138 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568277.1 1293804 D 316057 CDS YP_568278.1 91975619 4021615 1294519..1295382 1 NC_007958.1 inner-membrane translocator 1295382 4021615 RPD_1139 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568278.1 1294519 D 316057 CDS YP_568279.1 91975620 4021616 1295379..1296365 1 NC_007958.1 inner-membrane translocator 1296365 4021616 RPD_1140 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568279.1 1295379 D 316057 CDS YP_568280.1 91975621 4021617 complement(1296521..1297588) 1 NC_007958.1 group 1 glycosyl transferase 1297588 4021617 RPD_1141 Rhodopseudomonas palustris BisB5 group 1 glycosyl transferase YP_568280.1 1296521 R 316057 CDS YP_568281.1 91975622 4021618 1297841..1299598 1 NC_007958.1 ABC transporter-like protein 1299598 4021618 RPD_1142 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568281.1 1297841 D 316057 CDS YP_568282.1 91975623 4021619 1299680..1301878 1 NC_007958.1 Amylo-alpha-1,6-glucosidase 1301878 4021619 RPD_1143 Rhodopseudomonas palustris BisB5 Amylo-alpha-1,6-glucosidase YP_568282.1 1299680 D 316057 CDS YP_568283.1 91975624 4021620 1301927..1302400 1 NC_007958.1 hypothetical protein 1302400 4021620 RPD_1144 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568283.1 1301927 D 316057 CDS YP_568284.1 91975625 4021621 1302558..1303718 1 NC_007958.1 major facilitator transporter 1303718 4021621 RPD_1145 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_568284.1 1302558 D 316057 CDS YP_568285.1 91975626 4021622 1303783..1304139 1 NC_007958.1 hypothetical protein 1304139 4021622 RPD_1146 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568285.1 1303783 D 316057 CDS YP_568286.1 91975627 4021623 complement(1304154..1305011) 1 NC_007958.1 hypothetical protein 1305011 4021623 RPD_1147 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568286.1 1304154 R 316057 CDS YP_568287.1 91975628 4021624 1305132..1306433 1 NC_007958.1 FAD dependent oxidoreductase 1306433 4021624 RPD_1148 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_568287.1 1305132 D 316057 CDS YP_568288.1 91975629 4021625 complement(1306521..1308161) 1 NC_007958.1 ABC transporter-like protein 1308161 4021625 RPD_1149 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568288.1 1306521 R 316057 CDS YP_568289.1 91975630 4021626 complement(1308158..1308988) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 1308988 4021626 RPD_1150 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_568289.1 1308158 R 316057 CDS YP_568290.1 91975631 4021627 complement(1308993..1309970) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 1309970 4021627 RPD_1151 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_568290.1 1308993 R 316057 CDS YP_568291.1 91975632 4021628 complement(1309995..1311611) 1 NC_007958.1 extracellular solute-binding protein 1311611 4021628 RPD_1152 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_568291.1 1309995 R 316057 CDS YP_568292.1 91975633 4021629 complement(1311739..1313667) 1 NC_007958.1 Sulfate adenylyltransferase, large subunit 1313667 4021629 RPD_1153 Rhodopseudomonas palustris BisB5 Sulfate adenylyltransferase, large subunit YP_568292.1 1311739 R 316057 CDS YP_568293.1 91975634 4021630 complement(1313744..1314619) 1 NC_007958.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1314619 4021630 RPD_1154 Rhodopseudomonas palustris BisB5 sulfate adenylyltransferase subunit 2 YP_568293.1 1313744 R 316057 CDS YP_568294.1 91975635 4021631 1314906..1315652 1 NC_007958.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 1315652 4021631 RPD_1155 Rhodopseudomonas palustris BisB5 phosphoadenosine phosphosulfate reductase YP_568294.1 1314906 D 316057 CDS YP_568295.1 91975636 4021632 1315777..1316766 1 NC_007958.1 thiosulfate-binding protein 1316766 4021632 RPD_1156 Rhodopseudomonas palustris BisB5 thiosulfate-binding protein YP_568295.1 1315777 D 316057 CDS YP_568296.1 91975637 4021633 1316823..1317662 1 NC_007958.1 Sulfate ABC transporter permease CysT 1317662 4021633 RPD_1157 Rhodopseudomonas palustris BisB5 Sulfate ABC transporter permease CysT YP_568296.1 1316823 D 316057 CDS YP_568297.1 91975638 4021634 1317667..1318584 1 NC_007958.1 Sulfate ABC transporter permease CysW 1318584 4021634 RPD_1158 Rhodopseudomonas palustris BisB5 Sulfate ABC transporter permease CysW YP_568297.1 1317667 D 316057 CDS YP_568298.1 91975639 4021635 1318574..1319620 1 NC_007958.1 sulfate transport system permease 1 1319620 4021635 RPD_1159 Rhodopseudomonas palustris BisB5 sulfate transport system permease 1 YP_568298.1 1318574 D 316057 CDS YP_568299.1 91975640 4021636 1319752..1320753 1 NC_007958.1 NADH ubiquinone oxidoreductase, 20 kDa subunit 1320753 4021636 RPD_1160 Rhodopseudomonas palustris BisB5 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_568299.1 1319752 D 316057 CDS YP_568300.1 91975641 4021637 1320750..1322195 1 NC_007958.1 nickel-dependent hydrogenase, large subunit 1322195 4021637 RPD_1161 Rhodopseudomonas palustris BisB5 nickel-dependent hydrogenase, large subunit YP_568300.1 1320750 D 316057 CDS YP_568301.1 91975642 4021638 1322432..1323565 1 NC_007958.1 hydrogenase (NiFe) small subunit (hydA) 1323565 4021638 RPD_1162 Rhodopseudomonas palustris BisB5 hydrogenase (NiFe) small subunit (hydA) YP_568301.1 1322432 D 316057 CDS YP_568302.1 91975643 4021639 1323584..1325377 1 NC_007958.1 nickel-dependent hydrogenase, large subunit 1325377 4021639 RPD_1163 Rhodopseudomonas palustris BisB5 nickel-dependent hydrogenase, large subunit YP_568302.1 1323584 D 316057 CDS YP_568303.1 91975644 4021640 1325400..1326128 1 NC_007958.1 nickel-dependent hydrogenase b-type cytochrome subunit 1326128 4021640 RPD_1164 Rhodopseudomonas palustris BisB5 nickel-dependent hydrogenase b-type cytochrome subunit YP_568303.1 1325400 D 316057 CDS YP_568304.1 91975645 4021641 1326363..1326974 1 NC_007958.1 hydrogenase expression/formation protein 1326974 4021641 RPD_1165 Rhodopseudomonas palustris BisB5 hydrogenase expression/formation protein YP_568304.1 1326363 D 316057 CDS YP_568305.1 91975646 4021642 1326987..1327571 1 NC_007958.1 HupE/UreJ protein 1327571 4021642 RPD_1166 Rhodopseudomonas palustris BisB5 HupE/UreJ protein YP_568305.1 1326987 D 316057 CDS YP_568306.1 91975647 4021643 1327588..1327890 1 NC_007958.1 hydrogenase assembly chaperone hypC/hupF 1327890 4021643 RPD_1167 Rhodopseudomonas palustris BisB5 hydrogenase assembly chaperone hypC/hupF YP_568306.1 1327588 D 316057 CDS YP_568307.1 91975648 4021644 1328118..1328522 1 NC_007958.1 hydrogenase-1 expression HyaE 1328522 4021644 RPD_1168 Rhodopseudomonas palustris BisB5 hydrogenase-1 expression HyaE YP_568307.1 1328118 D 316057 CDS YP_568308.1 91975649 4021645 1328519..1329385 1 NC_007958.1 HupH hydrogenase expression protein 1329385 4021645 RPD_1169 Rhodopseudomonas palustris BisB5 HupH hydrogenase expression protein YP_568308.1 1328519 D 316057 CDS YP_568309.1 91975650 4021646 1329382..1329594 1 NC_007958.1 rubredoxin-type Fe(Cys)4 protein 1329594 4021646 RPD_1170 Rhodopseudomonas palustris BisB5 rubredoxin-type Fe(Cys)4 protein YP_568309.1 1329382 D 316057 CDS YP_568310.1 91975651 4021647 1329584..1330114 1 NC_007958.1 putative hydrogenase expression/formation protein HupJ 1330114 4021647 RPD_1171 Rhodopseudomonas palustris BisB5 putative hydrogenase expression/formation protein HupJ YP_568310.1 1329584 D 316057 CDS YP_568311.1 91975652 4021648 1330111..1331223 1 NC_007958.1 coenzyme F420-reducing hydrogenase subunit alpha-like 1331223 4021648 RPD_1172 Rhodopseudomonas palustris BisB5 coenzyme F420-reducing hydrogenase subunit alpha-like YP_568311.1 1330111 D 316057 CDS YP_568312.1 91975653 4021649 1331216..1331557 1 NC_007958.1 hydrogenase nickel insertion protein HypA 1331557 4021649 RPD_1173 Rhodopseudomonas palustris BisB5 hydrogenase nickel insertion protein HypA YP_568312.1 1331216 D 316057 CDS YP_568313.1 91975654 4021650 1331557..1332495 1 NC_007958.1 hydrogenase accessory protein HypB 1332495 4021650 RPD_1174 Rhodopseudomonas palustris BisB5 hydrogenase accessory protein HypB YP_568313.1 1331557 D 316057 CDS YP_568314.1 91975655 4021651 1332500..1334791 1 NC_007958.1 (NiFe) hydrogenase maturation protein HypF 1334791 4021651 RPD_1175 Rhodopseudomonas palustris BisB5 (NiFe) hydrogenase maturation protein HypF YP_568314.1 1332500 D 316057 CDS YP_568315.1 91975656 4021652 1334788..1335000 1 NC_007958.1 hydrogenase assembly chaperone hypC/hupF 1335000 4021652 RPD_1176 Rhodopseudomonas palustris BisB5 hydrogenase assembly chaperone hypC/hupF YP_568315.1 1334788 D 316057 CDS YP_568316.1 91975657 4021653 1334997..1336139 1 NC_007958.1 hydrogenase expression/formation protein HypD 1336139 4021653 RPD_1177 Rhodopseudomonas palustris BisB5 hydrogenase expression/formation protein HypD YP_568316.1 1334997 D 316057 CDS YP_568317.1 91975658 4021654 1336136..1337182 1 NC_007958.1 hydrogenase expression/formation protein HypE 1337182 4021654 RPD_1178 Rhodopseudomonas palustris BisB5 hydrogenase expression/formation protein HypE YP_568317.1 1336136 D 316057 CDS YP_568318.1 91975659 4021655 1337223..1338671 1 NC_007958.1 sigma-54 factor, interaction region 1338671 4021655 RPD_1179 Rhodopseudomonas palustris BisB5 sigma-54 factor, interaction region YP_568318.1 1337223 D 316057 CDS YP_568319.1 91975660 4021656 1338661..1340016 1 NC_007958.1 ATPase-like ATP-binding protein 1340016 4021656 RPD_1180 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_568319.1 1338661 D 316057 CDS YP_568320.1 91975661 4021657 complement(1340161..1341063) 1 NC_007958.1 alpha/beta hydrolase fold protein 1341063 4021657 RPD_1181 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_568320.1 1340161 R 316057 CDS YP_568321.1 91975662 4021658 1341241..1341663 1 NC_007958.1 regulatory protein ArsR 1341663 4021658 RPD_1182 Rhodopseudomonas palustris BisB5 regulatory protein ArsR YP_568321.1 1341241 D 316057 CDS YP_568322.1 91975663 4021659 complement(1341677..1342045) 1 NC_007958.1 rhodanese-like protein 1342045 4021659 RPD_1183 Rhodopseudomonas palustris BisB5 rhodanese-like protein YP_568322.1 1341677 R 316057 CDS YP_568323.1 91975664 4021660 complement(1342068..1343195) 1 NC_007958.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1343195 4021660 RPD_1184 Rhodopseudomonas palustris BisB5 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_568323.1 1342068 R 316057 CDS YP_568324.1 91975665 4021661 1343406..1344020 1 NC_007958.1 type 11 methyltransferase 1344020 4021661 RPD_1185 Rhodopseudomonas palustris BisB5 type 11 methyltransferase YP_568324.1 1343406 D 316057 CDS YP_568325.1 91975666 4021662 complement(1344043..1344435) 1 NC_007958.1 nitrogenase-associated protein 1344435 4021662 RPD_1186 Rhodopseudomonas palustris BisB5 nitrogenase-associated protein YP_568325.1 1344043 R 316057 CDS YP_568326.1 91975667 4021663 complement(1344452..1345039) 1 NC_007958.1 hypothetical protein 1345039 4021663 RPD_1187 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568326.1 1344452 R 316057 CDS YP_568327.1 91975668 4021664 1345275..1346150 1 NC_007958.1 modD protein 1346150 4021664 RPD_1188 Rhodopseudomonas palustris BisB5 modD protein YP_568327.1 1345275 D 316057 CDS YP_568328.1 91975669 4021665 complement(1346359..1348005) 1 NC_007958.1 AMP-dependent synthetase and ligase 1348005 4021665 RPD_1189 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_568328.1 1346359 R 316057 CDS YP_568329.1 91975670 4021666 1348248..1348454 1 NC_007958.1 hypothetical protein 1348454 4021666 RPD_1190 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568329.1 1348248 D 316057 CDS YP_568330.1 91975671 4021667 1348545..1349180 1 NC_007958.1 NUDIX hydrolase 1349180 4021667 RPD_1191 Rhodopseudomonas palustris BisB5 NUDIX hydrolase YP_568330.1 1348545 D 316057 CDS YP_568331.1 91975672 4021668 complement(1349269..1349547) 1 NC_007958.1 hypothetical protein 1349547 4021668 RPD_1192 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568331.1 1349269 R 316057 CDS YP_568332.1 91975673 4021669 complement(1349756..1350739) 1 NC_007958.1 hypothetical protein 1350739 4021669 RPD_1193 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568332.1 1349756 R 316057 CDS YP_568333.1 91975674 4021670 complement(1350963..1354427) 1 NC_007958.1 chromosome segregation protein SMC 1354427 4021670 RPD_1194 Rhodopseudomonas palustris BisB5 chromosome segregation protein SMC YP_568333.1 1350963 R 316057 CDS YP_568334.1 91975675 4021671 1354860..1355066 1 NC_007958.1 plasmid maintenance system antidote protein-like 1355066 4021671 RPD_1195 Rhodopseudomonas palustris BisB5 plasmid maintenance system antidote protein-like YP_568334.1 1354860 D 316057 CDS YP_568335.1 91975676 4021672 complement(1355424..1355792) 1 NC_007958.1 small multidrug resistance protein 1355792 4021672 RPD_1196 Rhodopseudomonas palustris BisB5 small multidrug resistance protein YP_568335.1 1355424 R 316057 CDS YP_568336.1 91975677 4021673 complement(1355843..1356511) 1 NC_007958.1 twin-arginine translocation pathway signal 1356511 4021673 RPD_1197 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_568336.1 1355843 R 316057 CDS YP_568337.1 91975678 4021674 complement(1356649..1357146) 1 NC_007958.1 hypothetical protein 1357146 4021674 RPD_1198 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568337.1 1356649 R 316057 CDS YP_568338.1 91975679 4021675 1357166..1358296 1 NC_007958.1 A/G-specific adenine glycosylase 1358296 4021675 RPD_1199 Rhodopseudomonas palustris BisB5 A/G-specific adenine glycosylase YP_568338.1 1357166 D 316057 CDS YP_568339.1 91975680 4021676 complement(1358425..1359558) 1 NC_007958.1 DNA methylase N-4/N-6 1359558 4021676 RPD_1200 Rhodopseudomonas palustris BisB5 DNA methylase N-4/N-6 YP_568339.1 1358425 R 316057 CDS YP_568340.1 91975681 4021677 1359877..1360836 1 NC_007958.1 hypothetical protein 1360836 4021677 RPD_1201 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568340.1 1359877 D 316057 CDS YP_568341.1 91975682 4021678 1360930..1361481 1 NC_007958.1 molybdenum cofactor biosynthesis protein 1361481 4021678 RPD_1202 Rhodopseudomonas palustris BisB5 molybdenum cofactor biosynthesis protein YP_568341.1 1360930 D 316057 CDS YP_568342.1 91975683 4021679 1361594..1362412 1 NC_007958.1 putative CoA transferase subunit A 1362412 4021679 RPD_1203 Rhodopseudomonas palustris BisB5 putative CoA transferase subunit A YP_568342.1 1361594 D 316057 CDS YP_568343.1 91975684 4021680 1362409..1363161 1 NC_007958.1 putative CoA transferase subunit B 1363161 4021680 RPD_1204 Rhodopseudomonas palustris BisB5 putative CoA transferase subunit B YP_568343.1 1362409 D 316057 CDS YP_568344.1 91975685 4021681 complement(1363220..1363783) 1 NC_007958.1 hypothetical protein 1363783 4021681 RPD_1205 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568344.1 1363220 R 316057 CDS YP_568345.1 91975686 4021682 1363937..1365118 1 NC_007958.1 radical SAM family protein 1365118 4021682 RPD_1206 Rhodopseudomonas palustris BisB5 radical SAM family protein YP_568345.1 1363937 D 316057 CDS YP_568346.1 91975687 4021683 1365133..1365576 1 NC_007958.1 glyoxalase/bleomycin resistance protein/dioxygenase 1365576 4021683 RPD_1207 Rhodopseudomonas palustris BisB5 glyoxalase/bleomycin resistance protein/dioxygenase YP_568346.1 1365133 D 316057 CDS YP_568347.1 91975688 4021684 1365648..1366544 1 NC_007958.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1366544 rnhB 4021684 rnhB Rhodopseudomonas palustris BisB5 ribonuclease HII YP_568347.1 1365648 D 316057 CDS YP_568348.1 91975689 4021685 1366541..1368127 1 NC_007958.1 hypothetical protein 1368127 4021685 RPD_1209 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568348.1 1366541 D 316057 CDS YP_568349.1 91975690 4021686 complement(1368142..1368990) 1 NC_007958.1 phage SPO1 DNA polymerase-like protein 1368990 4021686 RPD_1210 Rhodopseudomonas palustris BisB5 phage SPO1 DNA polymerase-like protein YP_568349.1 1368142 R 316057 CDS YP_568350.1 91975691 4021687 1369187..1370845 1 NC_007958.1 electron-transferring-flavoprotein dehydrogenase 1370845 4021687 RPD_1211 Rhodopseudomonas palustris BisB5 electron-transferring-flavoprotein dehydrogenase YP_568350.1 1369187 D 316057 CDS YP_568351.1 91975692 4021688 1371082..1372860 1 NC_007958.1 hypothetical protein 1372860 4021688 RPD_1212 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568351.1 1371082 D 316057 CDS YP_568352.1 91975693 4021689 1372880..1373764 1 NC_007958.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1373764 4021689 RPD_1213 Rhodopseudomonas palustris BisB5 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_568352.1 1372880 D 316057 CDS YP_568353.1 91975694 4021690 complement(1374035..1375045) 1 NC_007958.1 farnesyltranstransferase 1375045 4021690 RPD_1214 Rhodopseudomonas palustris BisB5 farnesyltranstransferase YP_568353.1 1374035 R 316057 CDS YP_568354.1 91975695 4021691 1375269..1375496 1 NC_007958.1 hypothetical protein 1375496 4021691 RPD_1215 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568354.1 1375269 D 316057 CDS YP_568355.1 91975696 4021692 1375489..1376268 1 NC_007958.1 methyltransferase small 1376268 4021692 RPD_1216 Rhodopseudomonas palustris BisB5 methyltransferase small YP_568355.1 1375489 D 316057 CDS YP_568356.1 91975697 4021693 1376520..1377419 1 NC_007958.1 peptidase S49 1377419 4021693 RPD_1217 Rhodopseudomonas palustris BisB5 peptidase S49 YP_568356.1 1376520 D 316057 CDS YP_568357.1 91975698 4021694 1377640..1377828 1 NC_007958.1 hypothetical protein 1377828 4021694 RPD_1218 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568357.1 1377640 D 316057 CDS YP_568358.1 91975699 4021695 1378278..1379240 1 NC_007958.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1379240 glyQ 4021695 glyQ Rhodopseudomonas palustris BisB5 glycyl-tRNA synthetase subunit alpha YP_568358.1 1378278 D 316057 CDS YP_568359.1 91975700 4021696 1379271..1379705 1 NC_007958.1 hypothetical protein 1379705 4021696 RPD_1220 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568359.1 1379271 D 316057 CDS YP_568360.1 91975701 4021697 1379705..1382173 1 NC_007958.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1382173 glyS 4021697 glyS Rhodopseudomonas palustris BisB5 glycyl-tRNA synthetase subunit beta YP_568360.1 1379705 D 316057 CDS YP_568361.1 91975702 4021698 1382415..1383515 1 NC_007958.1 hypothetical protein 1383515 4021698 RPD_1222 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568361.1 1382415 D 316057 CDS YP_568362.1 91975703 4021699 1384027..1384182 1 NC_007958.1 hypothetical protein 1384182 4021699 RPD_1223 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568362.1 1384027 D 316057 CDS YP_568363.1 91975704 4021700 1384273..1387356 1 NC_007958.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1387356 4021700 RPD_1224 Rhodopseudomonas palustris BisB5 pyruvate phosphate dikinase YP_568363.1 1384273 D 316057 CDS YP_568364.1 91975705 4021701 1387746..1389170 1 NC_007958.1 cell wall hydrolase, SleB 1389170 4021701 RPD_1225 Rhodopseudomonas palustris BisB5 cell wall hydrolase, SleB YP_568364.1 1387746 D 316057 CDS YP_568365.1 91975706 4021702 complement(1389439..1390401) 1 NC_007958.1 transposase, IS4 1390401 4021702 RPD_1226 Rhodopseudomonas palustris BisB5 transposase, IS4 YP_568365.1 1389439 R 316057 CDS YP_568366.1 91975707 4021703 complement(1390534..1391409) 1 NC_007958.1 nicotinate-nucleotide pyrophosphorylase 1391409 4021703 RPD_1227 Rhodopseudomonas palustris BisB5 nicotinate-nucleotide pyrophosphorylase YP_568366.1 1390534 R 316057 CDS YP_568367.1 91975708 4021704 complement(1391442..1393061) 1 NC_007958.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 1393061 4021704 RPD_1228 Rhodopseudomonas palustris BisB5 L-aspartate oxidase YP_568367.1 1391442 R 316057 CDS YP_568368.1 91975709 4021705 complement(1393174..1394286) 1 NC_007958.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1394286 4021705 RPD_1229 Rhodopseudomonas palustris BisB5 quinolinate synthetase YP_568368.1 1393174 R 316057 CDS YP_568369.1 91975710 4021706 1394627..1395613 1 NC_007958.1 zinc-binding alcohol dehydrogenase 1395613 4021706 RPD_1230 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_568369.1 1394627 D 316057 CDS YP_568370.1 91975711 4021707 1395713..1396306 1 NC_007958.1 hypothetical protein 1396306 4021707 RPD_1231 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568370.1 1395713 D 316057 CDS YP_568371.1 91975712 4021708 complement(1396342..1399041) 1 NC_007958.1 hypothetical protein 1399041 4021708 RPD_1232 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568371.1 1396342 R 316057 CDS YP_568372.1 91975713 4021709 complement(1399096..1400076) 1 NC_007958.1 hypothetical protein 1400076 4021709 RPD_1233 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568372.1 1399096 R 316057 CDS YP_568373.1 91975714 4021710 complement(1400090..1400596) 1 NC_007958.1 hypothetical protein 1400596 4021710 RPD_1234 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568373.1 1400090 R 316057 CDS YP_568374.1 91975715 4021711 complement(1400705..1401328) 1 NC_007958.1 metal-dependent phosphohydrolase 1401328 4021711 RPD_1235 Rhodopseudomonas palustris BisB5 metal-dependent phosphohydrolase YP_568374.1 1400705 R 316057 CDS YP_568375.1 91975716 4021712 1401607..1401777 1 NC_007958.1 hypothetical protein 1401777 4021712 RPD_1236 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568375.1 1401607 D 316057 CDS YP_568376.1 91975717 4021713 complement(1401768..1402421) 1 NC_007958.1 DNA-3-methyladenine glycosylase I 1402421 4021713 RPD_1237 Rhodopseudomonas palustris BisB5 DNA-3-methyladenine glycosylase I YP_568376.1 1401768 R 316057 CDS YP_568377.1 91975718 4021714 complement(1402418..1403299) 1 NC_007958.1 glycine cleavage T protein (aminomethyl transferase) 1403299 4021714 RPD_1238 Rhodopseudomonas palustris BisB5 glycine cleavage T protein (aminomethyl transferase) YP_568377.1 1402418 R 316057 CDS YP_568378.1 91975719 4021715 1403417..1404751 1 NC_007958.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1404751 4021715 RPD_1239 Rhodopseudomonas palustris BisB5 dihydroorotase YP_568378.1 1403417 D 316057 CDS YP_568379.1 91975720 4021716 1405025..1405180 1 NC_007958.1 hypothetical protein 1405180 4021716 RPD_1240 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568379.1 1405025 D 316057 CDS YP_568380.1 91975721 4021717 complement(1405284..1405547) 1 NC_007958.1 hypothetical protein 1405547 4021717 RPD_1241 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568380.1 1405284 R 316057 CDS YP_568381.1 91975722 4021718 complement(1405679..1406068) 1 NC_007958.1 hypothetical protein 1406068 4021718 RPD_1242 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568381.1 1405679 R 316057 CDS YP_568382.1 91975723 4021719 complement(1406130..1406555) 1 NC_007958.1 NUDIX hydrolase 1406555 4021719 RPD_1243 Rhodopseudomonas palustris BisB5 NUDIX hydrolase YP_568382.1 1406130 R 316057 CDS YP_568383.1 91975724 4021720 complement(1406561..1407070) 1 NC_007958.1 hypothetical protein 1407070 4021720 RPD_1244 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568383.1 1406561 R 316057 CDS YP_568384.1 91975725 4021721 1407132..1407911 1 NC_007958.1 hypothetical protein 1407911 4021721 RPD_1245 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568384.1 1407132 D 316057 CDS YP_568385.1 91975726 4021722 complement(1407976..1409445) 1 NC_007958.1 FAD linked oxidase-like protein 1409445 4021722 RPD_1246 Rhodopseudomonas palustris BisB5 FAD linked oxidase-like protein YP_568385.1 1407976 R 316057 CDS YP_568386.1 91975727 4021723 complement(1409492..1410484) 1 NC_007958.1 Sua5/YciO/YrdC/YwlC 1410484 4021723 RPD_1247 Rhodopseudomonas palustris BisB5 Sua5/YciO/YrdC/YwlC YP_568386.1 1409492 R 316057 CDS YP_568387.1 91975728 4021725 complement(1410878..1412149) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 1412149 4021725 RPD_1248 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_568387.1 1410878 R 316057 CDS YP_568388.1 91975729 4021726 1412581..1413300 1 NC_007958.1 aspartate racemase 1413300 4021726 RPD_1249 Rhodopseudomonas palustris BisB5 aspartate racemase YP_568388.1 1412581 D 316057 CDS YP_568389.1 91975730 4021727 1413317..1414336 1 NC_007958.1 zinc-binding alcohol dehydrogenase 1414336 4021727 RPD_1250 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_568389.1 1413317 D 316057 CDS YP_568390.1 91975731 4021728 1414333..1414743 1 NC_007958.1 phenylacetic acid degradation-like protein 1414743 4021728 RPD_1251 Rhodopseudomonas palustris BisB5 phenylacetic acid degradation-like protein YP_568390.1 1414333 D 316057 CDS YP_568391.1 91975732 4021729 1414771..1415532 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 1415532 4021729 RPD_1252 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568391.1 1414771 D 316057 CDS YP_568392.1 91975733 4021730 1415713..1416177 1 NC_007958.1 regulatory protein AsnC/Lrp 1416177 4021730 RPD_1253 Rhodopseudomonas palustris BisB5 regulatory protein AsnC/Lrp YP_568392.1 1415713 D 316057 CDS YP_568393.1 91975734 4021731 1416245..1417528 1 NC_007958.1 ABC-type branched-chain amino acid transport systems, periplasmic component 1417528 4021731 RPD_1254 Rhodopseudomonas palustris BisB5 ABC-type branched-chain amino acid transport systems, periplasmic component YP_568393.1 1416245 D 316057 CDS YP_568394.1 91975735 4021732 1417710..1419230 1 NC_007958.1 AMP-dependent synthetase and ligase 1419230 4021732 RPD_1255 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_568394.1 1417710 D 316057 CDS YP_568395.1 91975736 4021733 1419473..1419778 1 NC_007958.1 hypothetical protein 1419778 4021733 RPD_1256 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568395.1 1419473 D 316057 CDS YP_568396.1 91975737 4021734 complement(1419930..1420970) 1 NC_007958.1 class I and II aminotransferase 1420970 4021734 RPD_1257 Rhodopseudomonas palustris BisB5 class I and II aminotransferase YP_568396.1 1419930 R 316057 CDS YP_568397.1 91975738 4021735 complement(1420967..1421107) 1 NC_007958.1 hypothetical protein 1421107 4021735 RPD_1258 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568397.1 1420967 R 316057 CDS YP_568398.1 91975739 4021736 1421369..1421605 1 NC_007958.1 hypothetical protein 1421605 4021736 RPD_1259 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568398.1 1421369 D 316057 CDS YP_568399.1 91975740 4021737 1421688..1422380 1 NC_007958.1 Crp/Fnr family transcriptional regulator 1422380 4021737 RPD_1260 Rhodopseudomonas palustris BisB5 Crp/Fnr family transcriptional regulator YP_568399.1 1421688 D 316057 CDS YP_568400.1 91975741 4021738 1422480..1422671 1 NC_007958.1 hypothetical protein 1422671 4021738 RPD_1261 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568400.1 1422480 D 316057 CDS YP_568401.1 91975742 4021739 1422747..1423127 1 NC_007958.1 alkylhydroperoxidase AhpD core 1423127 4021739 RPD_1262 Rhodopseudomonas palustris BisB5 alkylhydroperoxidase AhpD core YP_568401.1 1422747 D 316057 CDS YP_568402.1 91975743 4021740 1423180..1424289 1 NC_007958.1 3,4-dihydroxy-2-butanone 4-phosphate synthase 1424289 4021740 RPD_1263 Rhodopseudomonas palustris BisB5 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_568402.1 1423180 D 316057 CDS YP_568403.1 91975744 4021741 1424347..1425561 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 1425561 4021741 RPD_1264 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_568403.1 1424347 D 316057 CDS YP_568404.1 91975745 4021742 1425749..1426681 1 NC_007958.1 beta-lactamase-like protein 1426681 4021742 RPD_1265 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_568404.1 1425749 D 316057 CDS YP_568405.1 91975746 4021743 complement(1426939..1427832) 1 NC_007958.1 hypothetical protein 1427832 4021743 RPD_1266 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568405.1 1426939 R 316057 CDS YP_568406.1 91975747 4021744 complement(1428144..1429772) 1 NC_007958.1 activates fatty acids by binding to coenzyme A; putative acyl-CoA synthetase 1429772 4021744 RPD_1267 Rhodopseudomonas palustris BisB5 putative acyl-CoA synthetase YP_568406.1 1428144 R 316057 CDS YP_568407.1 91975748 4021745 1429890..1430849 1 NC_007958.1 extensin-like protein 1430849 4021745 RPD_1268 Rhodopseudomonas palustris BisB5 extensin-like protein YP_568407.1 1429890 D 316057 CDS YP_568408.1 91975749 4021746 complement(1430936..1431610) 1 NC_007958.1 hypothetical protein 1431610 4021746 RPD_1269 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568408.1 1430936 R 316057 CDS YP_568409.1 91975750 4021747 1431944..1432924 1 NC_007958.1 Mg2+ transporter protein, CorA-like 1432924 4021747 RPD_1270 Rhodopseudomonas palustris BisB5 Mg2+ transporter protein, CorA-like YP_568409.1 1431944 D 316057 CDS YP_568410.1 91975751 4021748 complement(1433115..1433444) 1 NC_007958.1 hypothetical protein 1433444 4021748 RPD_1271 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568410.1 1433115 R 316057 CDS YP_568411.1 91975752 4021749 complement(1434525..1434971) 1 NC_007958.1 zinc-binding CMP/dCMP deaminase 1434971 4021749 RPD_1272 Rhodopseudomonas palustris BisB5 zinc-binding CMP/dCMP deaminase YP_568411.1 1434525 R 316057 CDS YP_568412.1 91975753 4021750 1435147..1437534 1 NC_007958.1 pseudouridine synthase Rsu 1437534 4021750 RPD_1273 Rhodopseudomonas palustris BisB5 pseudouridine synthase Rsu YP_568412.1 1435147 D 316057 CDS YP_568413.1 91975754 4021751 1437537..1438094 1 NC_007958.1 hypothetical protein 1438094 4021751 RPD_1274 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568413.1 1437537 D 316057 CDS YP_568414.1 91975755 4021752 complement(1438266..1439222) 1 NC_007958.1 regulatory protein LuxR 1439222 4021752 RPD_1275 Rhodopseudomonas palustris BisB5 regulatory protein LuxR YP_568414.1 1438266 R 316057 CDS YP_568415.1 91975756 4021753 complement(1439350..1440462) 1 NC_007958.1 histone deacetylase superfamily protein 1440462 4021753 RPD_1276 Rhodopseudomonas palustris BisB5 histone deacetylase superfamily protein YP_568415.1 1439350 R 316057 CDS YP_568416.1 91975757 4021754 complement(1440745..1441737) 1 NC_007958.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1441737 4021754 RPD_1277 Rhodopseudomonas palustris BisB5 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_568416.1 1440745 R 316057 CDS YP_568417.1 91975758 4021755 complement(1441737..1442204) 1 NC_007958.1 molybdopterin biosynthesis MoaE 1442204 4021755 RPD_1278 Rhodopseudomonas palustris BisB5 molybdopterin biosynthesis MoaE YP_568417.1 1441737 R 316057 CDS YP_568418.1 91975759 4021756 complement(1442229..1442480) 1 NC_007958.1 molybdopterin converting factor subunit 1 1442480 4021756 RPD_1279 Rhodopseudomonas palustris BisB5 molybdopterin converting factor subunit 1 YP_568418.1 1442229 R 316057 CDS YP_568419.1 91975760 4021757 complement(1442477..1443142) 1 NC_007958.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1443142 4021757 RPD_1280 Rhodopseudomonas palustris BisB5 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_568419.1 1442477 R 316057 CDS YP_568420.1 91975761 4021758 complement(1443237..1445324) 1 NC_007958.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1445324 uvrC 4021758 uvrC Rhodopseudomonas palustris BisB5 excinuclease ABC subunit C YP_568420.1 1443237 R 316057 CDS YP_568421.1 91975762 4021759 1445629..1446252 1 NC_007958.1 putative outer membrane protein 1446252 4021759 RPD_1282 Rhodopseudomonas palustris BisB5 putative outer membrane protein YP_568421.1 1445629 D 316057 CDS YP_568422.1 91975763 4021760 complement(1446505..1446717) 1 NC_007958.1 cold-shock DNA-binding domain-containing protein 1446717 4021760 RPD_1283 Rhodopseudomonas palustris BisB5 cold-shock DNA-binding domain-containing protein YP_568422.1 1446505 R 316057 CDS YP_568423.1 91975764 4021761 complement(1446976..1447833) 1 NC_007958.1 hypothetical protein 1447833 4021761 RPD_1284 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568423.1 1446976 R 316057 CDS YP_568424.1 91975765 4021762 1448264..1448659 1 NC_007958.1 response regulator receiver 1448659 4021762 RPD_1285 Rhodopseudomonas palustris BisB5 response regulator receiver YP_568424.1 1448264 D 316057 CDS YP_568425.1 91975766 4021763 complement(1448863..1449717) 1 NC_007958.1 HAD family hydrolase 1449717 4021763 RPD_1286 Rhodopseudomonas palustris BisB5 HAD family hydrolase YP_568425.1 1448863 R 316057 CDS YP_568426.1 91975767 4021764 complement(1449730..1451202) 1 NC_007958.1 putative cylclic diguanylate phosphodiesterase 1451202 4021764 RPD_1287 Rhodopseudomonas palustris BisB5 putative cylclic diguanylate phosphodiesterase YP_568426.1 1449730 R 316057 CDS YP_568427.1 91975768 4021765 complement(1451300..1452646) 1 NC_007958.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1452646 4021765 RPD_1288 Rhodopseudomonas palustris BisB5 beta alanine--pyruvate transaminase YP_568427.1 1451300 R 316057 CDS YP_568428.1 91975769 4021766 1452863..1454458 1 NC_007958.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1454458 hisS 4021766 hisS Rhodopseudomonas palustris BisB5 histidyl-tRNA synthetase YP_568428.1 1452863 D 316057 CDS YP_568429.1 91975770 4021767 1454653..1454856 1 NC_007958.1 4-oxalocrotonate tautomerase 1454856 4021767 RPD_1290 Rhodopseudomonas palustris BisB5 4-oxalocrotonate tautomerase YP_568429.1 1454653 D 316057 CDS YP_568430.1 91975771 4021768 1455026..1455475 1 NC_007958.1 hypothetical protein 1455475 4021768 RPD_1291 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568430.1 1455026 D 316057 CDS YP_568431.1 91975772 4021769 complement(1455472..1457535) 1 NC_007958.1 hypothetical protein 1457535 4021769 RPD_1292 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568431.1 1455472 R 316057 CDS YP_568432.1 91975773 4021770 complement(1457682..1460507) 1 NC_007958.1 double-transmembrane region-like protein 1460507 4021770 RPD_1293 Rhodopseudomonas palustris BisB5 double-transmembrane region-like protein YP_568432.1 1457682 R 316057 CDS YP_568433.1 91975774 4021771 complement(1460504..1461442) 1 NC_007958.1 hypothetical protein 1461442 4021771 RPD_1294 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568433.1 1460504 R 316057 CDS YP_568434.1 91975775 4021772 complement(1461442..1462446) 1 NC_007958.1 ATPase 1462446 4021772 RPD_1295 Rhodopseudomonas palustris BisB5 ATPase YP_568434.1 1461442 R 316057 CDS YP_568435.1 91975776 4021773 1462698..1463309 1 NC_007958.1 hypothetical protein 1463309 4021773 RPD_1296 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568435.1 1462698 D 316057 CDS YP_568436.1 91975777 4021774 1463359..1464003 1 NC_007958.1 NUDIX hydrolase 1464003 4021774 RPD_1297 Rhodopseudomonas palustris BisB5 NUDIX hydrolase YP_568436.1 1463359 D 316057 CDS YP_568437.1 91975778 4021775 1464000..1464263 1 NC_007958.1 hypothetical protein 1464263 4021775 RPD_1298 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568437.1 1464000 D 316057 CDS YP_568438.1 91975779 4021776 1464260..1465513 1 NC_007958.1 polynucleotide adenylyltransferase region 1465513 4021776 RPD_1299 Rhodopseudomonas palustris BisB5 polynucleotide adenylyltransferase region YP_568438.1 1464260 D 316057 CDS YP_568439.1 91975780 4021777 complement(1465520..1466152) 1 NC_007958.1 hypothetical protein 1466152 4021777 RPD_1300 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568439.1 1465520 R 316057 CDS YP_568440.1 91975781 4021778 complement(1466166..1466618) 1 NC_007958.1 tRNA/rRNA methyltransferase SpoU 1466618 4021778 RPD_1301 Rhodopseudomonas palustris BisB5 tRNA/rRNA methyltransferase SpoU YP_568440.1 1466166 R 316057 CDS YP_568441.1 91975782 4021779 1466896..1467423 1 NC_007958.1 ubiquinol-cytochrome c reductase, iron-sulfur subunit 1467423 4021779 RPD_1302 Rhodopseudomonas palustris BisB5 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_568441.1 1466896 D 316057 CDS YP_568442.1 91975783 4021780 1467464..1469533 1 NC_007958.1 cytochrome c1 1469533 4021780 RPD_1303 Rhodopseudomonas palustris BisB5 cytochrome c1 YP_568442.1 1467464 D 316057 CDS YP_568443.1 91975784 4021781 1469698..1470372 1 NC_007958.1 carboxymethylenebutenolidase 1470372 4021781 RPD_1304 Rhodopseudomonas palustris BisB5 carboxymethylenebutenolidase YP_568443.1 1469698 D 316057 CDS YP_568444.1 91975785 4021782 1470463..1470684 1 NC_007958.1 hypothetical protein 1470684 4021782 RPD_1305 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568444.1 1470463 D 316057 CDS YP_568445.1 91975786 4021783 complement(1470756..1471475) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 1471475 4021783 RPD_1306 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568445.1 1470756 R 316057 CDS YP_568446.1 91975787 4021784 complement(1471529..1472167) 1 NC_007958.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 1472167 4021784 RPD_1307 Rhodopseudomonas palustris BisB5 pyridoxamine 5'-phosphate oxidase YP_568446.1 1471529 R 316057 CDS YP_568447.1 91975788 4021785 1472288..1472698 1 NC_007958.1 hypothetical protein 1472698 4021785 RPD_1308 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568447.1 1472288 D 316057 CDS YP_568448.1 91975789 4021786 1472809..1473780 1 NC_007958.1 chaperone DnaJ-like 1473780 4021786 RPD_1309 Rhodopseudomonas palustris BisB5 chaperone DnaJ-like YP_568448.1 1472809 D 316057 CDS YP_568449.1 91975790 4021787 complement(1474030..1474809) 1 NC_007958.1 hypothetical protein 1474809 4021787 RPD_1310 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568449.1 1474030 R 316057 CDS YP_568450.1 91975791 4021788 complement(1474831..1475388) 1 NC_007958.1 sigma-70, region 4 type 2 1475388 4021788 RPD_1311 Rhodopseudomonas palustris BisB5 sigma-70, region 4 type 2 YP_568450.1 1474831 R 316057 CDS YP_568451.1 91975792 4021789 1475523..1476341 1 NC_007958.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 1476341 4021789 RPD_1312 Rhodopseudomonas palustris BisB5 enoyl-(acyl carrier protein) reductase YP_568451.1 1475523 D 316057 CDS YP_568452.1 91975793 4021790 1476458..1477066 1 NC_007958.1 phosphoglycerate mutase 1477066 4021790 RPD_1313 Rhodopseudomonas palustris BisB5 phosphoglycerate mutase YP_568452.1 1476458 D 316057 CDS YP_568453.1 91975794 4021791 1477174..1478259 1 NC_007958.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1478259 4021791 RPD_1314 Rhodopseudomonas palustris BisB5 chorismate synthase YP_568453.1 1477174 D 316057 CDS YP_568454.1 91975795 4021792 complement(1478343..1478648) 1 NC_007958.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor 1478648 clpS 4021792 clpS Rhodopseudomonas palustris BisB5 ATP-dependent Clp protease adaptor YP_568454.1 1478343 R 316057 CDS YP_568455.1 91975796 4021793 1478872..1479717 1 NC_007958.1 hypothetical protein 1479717 4021793 RPD_1316 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568455.1 1478872 D 316057 CDS YP_568456.1 91975797 4021794 complement(1479825..1481228) 1 NC_007958.1 carotenoid oxygenase 1481228 4021794 RPD_1317 Rhodopseudomonas palustris BisB5 carotenoid oxygenase YP_568456.1 1479825 R 316057 CDS YP_568457.1 91975798 4021795 complement(1481266..1482642) 1 NC_007958.1 hypothetical protein 1482642 4021795 RPD_1318 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568457.1 1481266 R 316057 CDS YP_568458.1 91975799 4021796 complement(1482635..1483744) 1 NC_007958.1 hypothetical protein 1483744 4021796 RPD_1319 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568458.1 1482635 R 316057 CDS YP_568459.1 91975800 4021797 complement(1483760..1484812) 1 NC_007958.1 hypothetical protein 1484812 4021797 RPD_1320 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568459.1 1483760 R 316057 CDS YP_568460.1 91975801 4021798 complement(1484969..1485952) 1 NC_007958.1 alpha/beta hydrolase fold protein 1485952 4021798 RPD_1321 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_568460.1 1484969 R 316057 CDS YP_568461.1 91975802 4021799 complement(1486155..1487663) 1 NC_007958.1 MlrC-like 1487663 4021799 RPD_1322 Rhodopseudomonas palustris BisB5 MlrC-like YP_568461.1 1486155 R 316057 CDS YP_568462.1 91975803 4021800 complement(1487908..1489593) 1 NC_007958.1 activates fatty acids by binding to coenzyme A; Long-chain-fatty-acid--CoA ligase 1489593 4021800 RPD_1323 Rhodopseudomonas palustris BisB5 Long-chain-fatty-acid--CoA ligase YP_568462.1 1487908 R 316057 CDS YP_568463.1 91975804 4021801 complement(1489802..1491280) 1 NC_007958.1 Serine-type D-Ala-D-Ala carboxypeptidase 1491280 4021801 RPD_1324 Rhodopseudomonas palustris BisB5 Serine-type D-Ala-D-Ala carboxypeptidase YP_568463.1 1489802 R 316057 CDS YP_568464.1 91975805 4021802 complement(1491450..1493258) 1 NC_007958.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABC transporter 1493258 4021802 RPD_1325 Rhodopseudomonas palustris BisB5 cyclic beta-1,2-glucan ABC transporter YP_568464.1 1491450 R 316057 CDS YP_568465.1 91975806 4021803 1493690..1494079 1 NC_007958.1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 1494079 4021803 RPD_1326 Rhodopseudomonas palustris BisB5 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 YP_568465.1 1493690 D 316057 CDS YP_568466.1 91975807 4021804 1494076..1494702 1 NC_007958.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1494702 4021804 RPD_1327 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit B YP_568466.1 1494076 D 316057 CDS YP_568467.1 91975808 4021805 1494699..1496444 1 NC_007958.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1496444 4021805 RPD_1328 Rhodopseudomonas palustris BisB5 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_568467.1 1494699 D 316057 CDS YP_568468.1 91975809 4021806 1496441..1496914 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1496914 4021806 RPD_1329 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit E YP_568468.1 1496441 D 316057 CDS YP_568469.1 91975810 4021807 1496911..1498197 1 NC_007958.1 NADH dehydrogenase (quinone) 1498197 4021807 RPD_1330 Rhodopseudomonas palustris BisB5 NADH dehydrogenase (quinone) YP_568469.1 1496911 D 316057 CDS YP_568470.1 91975811 4021808 1498194..1500812 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1500812 4021808 RPD_1331 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit G YP_568470.1 1498194 D 316057 CDS YP_568471.1 91975812 4021809 1500809..1501768 1 NC_007958.1 respiratory-chain NADH dehydrogenase subunit 1 1501768 4021809 RPD_1332 Rhodopseudomonas palustris BisB5 respiratory-chain NADH dehydrogenase subunit 1 YP_568471.1 1500809 D 316057 CDS YP_568472.1 91975813 4021810 1501765..1502280 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1502280 4021810 RPD_1333 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit I YP_568472.1 1501765 D 316057 CDS YP_568473.1 91975814 4021811 1502277..1502783 1 NC_007958.1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 1502783 4021811 RPD_1334 Rhodopseudomonas palustris BisB5 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_568473.1 1502277 D 316057 CDS YP_568474.1 91975815 4021812 1502780..1503088 1 NC_007958.1 NADH-ubiquinone oxidoreductase subunit 4L 1503088 4021812 RPD_1335 Rhodopseudomonas palustris BisB5 NADH-ubiquinone oxidoreductase subunit 4L YP_568474.1 1502780 D 316057 CDS YP_568475.1 91975816 4021813 1503085..1505157 1 NC_007958.1 proton-translocating NADH-quinone oxidoreductase subunit L 1505157 4021813 RPD_1336 Rhodopseudomonas palustris BisB5 proton-translocating NADH-quinone oxidoreductase subunit L YP_568475.1 1503085 D 316057 CDS YP_568476.1 91975817 4021814 1505148..1506593 1 NC_007958.1 proton-translocating NADH-quinone oxidoreductase subunit M 1506593 4021814 RPD_1337 Rhodopseudomonas palustris BisB5 proton-translocating NADH-quinone oxidoreductase subunit M YP_568476.1 1505148 D 316057 CDS YP_568477.1 91975818 4021815 1506590..1507954 1 NC_007958.1 NADH dehydrogenase (quinone) 1507954 4021815 RPD_1338 Rhodopseudomonas palustris BisB5 NADH dehydrogenase (quinone) YP_568477.1 1506590 D 316057 CDS YP_568478.1 91975819 4021816 complement(1508006..1509313) 1 NC_007958.1 O-acetylhomoserine/O-acetylserine sulfhydrylase 1509313 4021816 RPD_1339 Rhodopseudomonas palustris BisB5 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_568478.1 1508006 R 316057 CDS YP_568479.1 91975820 4021817 complement(1509660..1510349) 1 NC_007958.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; transcriptional regulator FixK 1510349 fixK 4021817 fixK Rhodopseudomonas palustris BisB5 transcriptional regulator FixK YP_568479.1 1509660 R 316057 CDS YP_568480.1 91975821 4021818 complement(1510541..1510936) 1 NC_007958.1 response regulator receiver 1510936 4021818 RPD_1341 Rhodopseudomonas palustris BisB5 response regulator receiver YP_568480.1 1510541 R 316057 CDS YP_568481.1 91975822 4021819 complement(1511019..1511636) 1 NC_007958.1 response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; response regulator FixJ 1511636 fixJ 4021819 fixJ Rhodopseudomonas palustris BisB5 response regulator FixJ YP_568481.1 1511019 R 316057 CDS YP_568482.1 91975823 4021820 complement(1511626..1513158) 1 NC_007958.1 PAS/PAC sensor signal transduction histidine kinase 1513158 4021820 RPD_1343 Rhodopseudomonas palustris BisB5 PAS/PAC sensor signal transduction histidine kinase YP_568482.1 1511626 R 316057 CDS YP_568483.1 91975824 4021821 complement(1513313..1514044) 1 NC_007958.1 putative signal-transduction protein with CBS domains 1514044 4021821 RPD_1344 Rhodopseudomonas palustris BisB5 putative signal-transduction protein with CBS domains YP_568483.1 1513313 R 316057 CDS YP_568484.1 91975825 4021822 complement(1514135..1514968) 1 NC_007958.1 hypothetical protein 1514968 4021822 RPD_1345 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568484.1 1514135 R 316057 CDS YP_568485.1 91975826 4021823 1515153..1515977 1 NC_007958.1 hypothetical protein 1515977 4021823 RPD_1346 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568485.1 1515153 D 316057 CDS YP_568486.1 91975827 4021824 complement(1516088..1516420) 1 NC_007958.1 hypothetical protein 1516420 4021824 RPD_1347 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568486.1 1516088 R 316057 CDS YP_568487.1 91975828 4021825 1516634..1518394 1 NC_007958.1 Poly-beta-hydroxybutyrate polymerase-like 1518394 4021825 RPD_1348 Rhodopseudomonas palustris BisB5 Poly-beta-hydroxybutyrate polymerase-like YP_568487.1 1516634 D 316057 CDS YP_568488.1 91975829 4021826 complement(1518376..1519941) 1 NC_007958.1 hypothetical protein 1519941 4021826 RPD_1349 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568488.1 1518376 R 316057 CDS YP_568489.1 91975830 4021827 1520090..1520596 1 NC_007958.1 CBS domain containing membrane protein 1520596 4021827 RPD_1350 Rhodopseudomonas palustris BisB5 CBS domain containing membrane protein YP_568489.1 1520090 D 316057 CDS YP_568490.1 91975831 4021828 1520728..1523451 1 NC_007958.1 GCN5-like N-acetyltransferase 1523451 4021828 RPD_1351 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_568490.1 1520728 D 316057 CDS YP_568491.1 91975832 4021829 complement(1523525..1524004) 1 NC_007958.1 hypothetical protein 1524004 4021829 RPD_1352 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568491.1 1523525 R 316057 CDS YP_568492.1 91975833 4021830 1524114..1525250 1 NC_007958.1 hypothetical protein 1525250 4021830 RPD_1353 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568492.1 1524114 D 316057 CDS YP_568493.1 91975834 4021831 1525253..1526029 1 NC_007958.1 ABC transporter-like protein 1526029 4021831 RPD_1354 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568493.1 1525253 D 316057 CDS YP_568494.1 91975835 4021832 1526037..1527209 1 NC_007958.1 hypothetical protein 1527209 4021832 RPD_1355 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568494.1 1526037 D 316057 CDS YP_568495.1 91975836 4021833 complement(1527172..1527456) 1 NC_007958.1 putative cytochrome c, class I 1527456 4021833 RPD_1356 Rhodopseudomonas palustris BisB5 putative cytochrome c, class I YP_568495.1 1527172 R 316057 CDS YP_568496.1 91975837 4021834 1527675..1528394 1 NC_007958.1 Crp/Fnr family transcriptional regulator 1528394 4021834 RPD_1357 Rhodopseudomonas palustris BisB5 Crp/Fnr family transcriptional regulator YP_568496.1 1527675 D 316057 CDS YP_568497.1 91975838 4021835 1528442..1529701 1 NC_007958.1 Ion transport protein 1529701 4021835 RPD_1358 Rhodopseudomonas palustris BisB5 Ion transport protein YP_568497.1 1528442 D 316057 CDS YP_568498.1 91975839 4021836 complement(1529800..1530120) 1 NC_007958.1 hypothetical protein 1530120 4021836 RPD_1359 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568498.1 1529800 R 316057 CDS YP_568499.1 91975840 4021837 1530263..1532374 1 NC_007958.1 molybdopterin oxidoreductase 1532374 4021837 RPD_1360 Rhodopseudomonas palustris BisB5 molybdopterin oxidoreductase YP_568499.1 1530263 D 316057 CDS YP_568500.1 91975841 4021838 complement(1532445..1532732) 1 NC_007958.1 hypothetical protein 1532732 4021838 RPD_1361 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568500.1 1532445 R 316057 CDS YP_568501.1 91975842 4021839 1533279..1533521 1 NC_007958.1 hypothetical protein 1533521 4021839 RPD_1362 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568501.1 1533279 D 316057 CDS YP_568502.1 91975843 4021840 1533550..1533813 1 NC_007958.1 hypothetical protein 1533813 4021840 RPD_1363 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568502.1 1533550 D 316057 CDS YP_568503.1 91975844 4021841 1534130..1534762 1 NC_007958.1 urease accessory protein UreG 1534762 4021841 RPD_1364 Rhodopseudomonas palustris BisB5 urease accessory protein UreG YP_568503.1 1534130 D 316057 CDS YP_568504.1 91975845 4021842 1534981..1536636 1 NC_007958.1 signal transduction histidine kinase 1536636 4021842 RPD_1365 Rhodopseudomonas palustris BisB5 signal transduction histidine kinase YP_568504.1 1534981 D 316057 CDS YP_568505.1 91975846 4021843 complement(1536758..1537303) 1 NC_007958.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1537303 4021843 RPD_1366 Rhodopseudomonas palustris BisB5 RNA polymerase sigma factor YP_568505.1 1536758 R 316057 CDS YP_568506.1 91975847 4021844 complement(1537303..1537521) 1 NC_007958.1 hypothetical protein 1537521 4021844 RPD_1367 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568506.1 1537303 R 316057 CDS YP_568507.1 91975848 4021845 1537746..1538552 1 NC_007958.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 1538552 4021845 RPD_1368 Rhodopseudomonas palustris BisB5 two-component response regulator YP_568507.1 1537746 D 316057 CDS YP_568508.1 91975849 4021846 1538973..1539383 1 NC_007958.1 hypothetical protein 1539383 4021846 RPD_1369 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568508.1 1538973 D 316057 CDS YP_568509.1 91975850 4021847 complement(1539659..1540762) 1 NC_007958.1 hypothetical protein 1540762 4021847 RPD_1370 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568509.1 1539659 R 316057 CDS YP_568510.1 91975851 4021848 1541009..1541761 1 NC_007958.1 hypothetical protein 1541761 4021848 RPD_1371 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568510.1 1541009 D 316057 CDS YP_568511.1 91975852 4021849 1541887..1542552 1 NC_007958.1 hypothetical protein 1542552 4021849 RPD_1372 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568511.1 1541887 D 316057 CDS YP_568512.1 91975853 4021850 1542680..1542835 1 NC_007958.1 hypothetical protein 1542835 4021850 RPD_1373 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568512.1 1542680 D 316057 CDS YP_568513.1 91975854 4021851 complement(1543102..1543302) 1 NC_007958.1 CsbD-like protein 1543302 4021851 RPD_1374 Rhodopseudomonas palustris BisB5 CsbD-like protein YP_568513.1 1543102 R 316057 CDS YP_568514.1 91975855 4021852 complement(1543492..1545666) 1 NC_007958.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 1545666 4021852 RPD_1375 Rhodopseudomonas palustris BisB5 malate synthase G YP_568514.1 1543492 R 316057 CDS YP_568515.1 91975856 4021853 complement(1545814..1546677) 1 NC_007958.1 Sulfate ABC transporter permease CysW 1546677 4021853 RPD_1376 Rhodopseudomonas palustris BisB5 Sulfate ABC transporter permease CysW YP_568515.1 1545814 R 316057 CDS YP_568516.1 91975857 4021854 complement(1546677..1547504) 1 NC_007958.1 Sulfate ABC transporter permease CysT 1547504 4021854 RPD_1377 Rhodopseudomonas palustris BisB5 Sulfate ABC transporter permease CysT YP_568516.1 1546677 R 316057 CDS YP_568517.1 91975858 4021855 complement(1547688..1548695) 1 NC_007958.1 thiosulfate-binding protein 1548695 4021855 RPD_1378 Rhodopseudomonas palustris BisB5 thiosulfate-binding protein YP_568517.1 1547688 R 316057 CDS YP_568518.1 91975859 4021856 1549046..1550482 1 NC_007958.1 uroporphyrin-III C-methyltransferase 1550482 4021856 RPD_1379 Rhodopseudomonas palustris BisB5 uroporphyrin-III C-methyltransferase YP_568518.1 1549046 D 316057 CDS YP_568519.1 91975860 4021857 1550479..1550793 1 NC_007958.1 hypothetical protein 1550793 4021857 RPD_1380 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568519.1 1550479 D 316057 CDS YP_568520.1 91975861 4021858 1550803..1552458 1 NC_007958.1 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like 1552458 4021858 RPD_1381 Rhodopseudomonas palustris BisB5 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like YP_568520.1 1550803 D 316057 CDS YP_568521.1 91975862 4021859 1552445..1552954 1 NC_007958.1 hypothetical protein 1552954 4021859 RPD_1382 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568521.1 1552445 D 316057 CDS YP_568522.1 91975863 4021860 1553187..1554122 1 NC_007958.1 catalyzes the formation of glutamate from glutamine; glutaminase 1554122 4021860 RPD_1383 Rhodopseudomonas palustris BisB5 glutaminase YP_568522.1 1553187 D 316057 CDS YP_568523.1 91975864 4021861 complement(1554227..1554445) 1 NC_007958.1 hypothetical protein 1554445 4021861 RPD_1384 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568523.1 1554227 R 316057 CDS YP_568524.1 91975865 4021862 1554880..1555938 1 NC_007958.1 glutamate--ammonia ligase 1555938 4021862 RPD_1385 Rhodopseudomonas palustris BisB5 glutamate--ammonia ligase YP_568524.1 1554880 D 316057 CDS YP_568525.1 91975866 4021863 1556115..1556627 1 NC_007958.1 Allergen V5/Tpx-1-like protein 1556627 4021863 RPD_1386 Rhodopseudomonas palustris BisB5 Allergen V5/Tpx-1-like protein YP_568525.1 1556115 D 316057 CDS YP_568526.1 91975867 4021865 1556963..1557751 1 NC_007958.1 3-hydroxybutyrate dehydrogenase 1557751 4021865 RPD_1388 Rhodopseudomonas palustris BisB5 3-hydroxybutyrate dehydrogenase YP_568526.1 1556963 D 316057 CDS YP_568527.1 91975868 4021866 complement(1557772..1558062) 1 NC_007958.1 plasmid stabilization system protein 1558062 4021866 RPD_1389 Rhodopseudomonas palustris BisB5 plasmid stabilization system protein YP_568527.1 1557772 R 316057 CDS YP_568528.1 91975869 4021867 complement(1558059..1558289) 1 NC_007958.1 hypothetical protein 1558289 4021867 RPD_1390 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568528.1 1558059 R 316057 CDS YP_568529.1 91975870 4021868 complement(1558341..1559711) 1 NC_007958.1 polysaccharide biosynthesis protein 1559711 4021868 RPD_1391 Rhodopseudomonas palustris BisB5 polysaccharide biosynthesis protein YP_568529.1 1558341 R 316057 CDS YP_568530.1 91975871 4021869 1559772..1560191 1 NC_007958.1 hypothetical protein 1560191 4021869 RPD_1392 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568530.1 1559772 D 316057 CDS YP_568531.1 91975872 4021870 1560386..1560934 1 NC_007958.1 methyl-accepting chemotaxis sensory transducer 1560934 4021870 RPD_1393 Rhodopseudomonas palustris BisB5 methyl-accepting chemotaxis sensory transducer YP_568531.1 1560386 D 316057 CDS YP_568532.1 91975873 4021871 1560900..1562234 1 NC_007958.1 chemotaxis sensory transducer 1562234 4021871 RPD_1394 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_568532.1 1560900 D 316057 CDS YP_568533.1 91975874 4021872 1562405..1562704 1 NC_007958.1 hypothetical protein 1562704 4021872 RPD_1395 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568533.1 1562405 D 316057 CDS YP_568534.1 91975875 4021873 complement(1562771..1563253) 1 NC_007958.1 YbaK/prolyl-tRNA synthetase associated region 1563253 4021873 RPD_1396 Rhodopseudomonas palustris BisB5 YbaK/prolyl-tRNA synthetase associated region YP_568534.1 1562771 R 316057 CDS YP_568535.1 91975876 4021874 complement(1563365..1564234) 1 NC_007958.1 amidohydrolase 2 1564234 4021874 RPD_1397 Rhodopseudomonas palustris BisB5 amidohydrolase 2 YP_568535.1 1563365 R 316057 CDS YP_568536.1 91975877 4021875 1564550..1564675 1 NC_007958.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1564675 rpmJ 4021875 rpmJ Rhodopseudomonas palustris BisB5 50S ribosomal protein L36 YP_568536.1 1564550 D 316057 CDS YP_568537.1 91975878 4021876 1564824..1565504 1 NC_007958.1 hypothetical protein 1565504 4021876 RPD_1399 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568537.1 1564824 D 316057 CDS YP_568538.1 91975879 4021877 1565575..1566537 1 NC_007958.1 alpha/beta hydrolase fold protein 1566537 4021877 RPD_1400 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_568538.1 1565575 D 316057 CDS YP_568539.1 91975880 4021878 1566679..1567107 1 NC_007958.1 OsmC-like protein 1567107 4021878 RPD_1401 Rhodopseudomonas palustris BisB5 OsmC-like protein YP_568539.1 1566679 D 316057 CDS YP_568540.1 91975881 4021879 complement(1567473..1568906) 1 NC_007958.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1568906 4021879 RPD_1402 Rhodopseudomonas palustris BisB5 pyruvate kinase YP_568540.1 1567473 R 316057 CDS YP_568541.1 91975882 4021880 complement(1568903..1569493) 1 NC_007958.1 hypothetical protein 1569493 4021880 RPD_1403 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568541.1 1568903 R 316057 CDS YP_568542.1 91975883 4021881 1569709..1570002 1 NC_007958.1 hypothetical protein 1570002 4021881 RPD_1404 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568542.1 1569709 D 316057 CDS YP_568543.1 91975884 4021882 1570177..1570449 1 NC_007958.1 hypothetical protein 1570449 4021882 RPD_1405 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568543.1 1570177 D 316057 CDS YP_568544.1 91975885 4021883 complement(1570732..1572501) 1 NC_007958.1 hypothetical protein 1572501 4021883 RPD_1406 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568544.1 1570732 R 316057 CDS YP_568545.1 91975886 4021884 complement(1572630..1574780) 1 NC_007958.1 peptidoglycan binding domain-containing protein 1574780 4021884 RPD_1407 Rhodopseudomonas palustris BisB5 peptidoglycan binding domain-containing protein YP_568545.1 1572630 R 316057 CDS YP_568546.1 91975887 4021885 complement(1575141..1576643) 1 NC_007958.1 two component, sigma54 specific, transcriptional regulator, Fis family 1576643 4021885 RPD_1408 Rhodopseudomonas palustris BisB5 two component, sigma54 specific, transcriptional regulator, Fis family YP_568546.1 1575141 R 316057 CDS YP_568547.1 91975888 4021886 complement(1576705..1577367) 1 NC_007958.1 integral membrane protein TerC 1577367 4021886 RPD_1409 Rhodopseudomonas palustris BisB5 integral membrane protein TerC YP_568547.1 1576705 R 316057 CDS YP_568548.1 91975889 4021887 complement(1577489..1577794) 1 NC_007958.1 hypothetical protein 1577794 4021887 RPD_1410 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568548.1 1577489 R 316057 CDS YP_568549.1 91975890 4021888 1578029..1579927 1 NC_007958.1 peptidase M3B, oligoendopeptidase-like clade 3 1579927 4021888 RPD_1411 Rhodopseudomonas palustris BisB5 peptidase M3B, oligoendopeptidase-like clade 3 YP_568549.1 1578029 D 316057 CDS YP_568550.1 91975891 4021889 1580008..1580268 1 NC_007958.1 SpoVT/AbrB-like protein 1580268 4021889 RPD_1412 Rhodopseudomonas palustris BisB5 SpoVT/AbrB-like protein YP_568550.1 1580008 D 316057 CDS YP_568551.1 91975892 4021890 1580265..1580657 1 NC_007958.1 death-on-curing protein 1580657 4021890 RPD_1413 Rhodopseudomonas palustris BisB5 death-on-curing protein YP_568551.1 1580265 D 316057 CDS YP_568552.1 91975893 4021891 1580956..1581147 1 NC_007958.1 aa3 type cytochrome c oxidase subunit IV 1581147 4021891 RPD_1414 Rhodopseudomonas palustris BisB5 aa3 type cytochrome c oxidase subunit IV YP_568552.1 1580956 D 316057 CDS YP_568553.1 91975894 4021892 1581226..1582350 1 NC_007958.1 NAD(P)(+) transhydrogenase 1582350 4021892 RPD_1415 Rhodopseudomonas palustris BisB5 NAD(P)(+) transhydrogenase YP_568553.1 1581226 D 316057 CDS YP_568554.1 91975895 4021893 1582363..1582686 1 NC_007958.1 nicotinamide nucleotide transhydrogenase subunit alpha2 1582686 4021893 RPD_1416 Rhodopseudomonas palustris BisB5 nicotinamide nucleotide transhydrogenase subunit alpha2 YP_568554.1 1582363 D 316057 CDS YP_568555.1 91975896 4021894 1582700..1584103 1 NC_007958.1 NAD(P) transhydrogenase subunit beta 1584103 4021894 RPD_1417 Rhodopseudomonas palustris BisB5 NAD(P) transhydrogenase subunit beta YP_568555.1 1582700 D 316057 CDS YP_568556.1 91975897 4021895 complement(1584183..1584704) 1 NC_007958.1 hypothetical protein 1584704 4021895 RPD_1418 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568556.1 1584183 R 316057 CDS YP_568557.1 91975898 4021896 complement(1584805..1585179) 1 NC_007958.1 glyoxalase/bleomycin resistance protein/dioxygenase 1585179 4021896 RPD_1419 Rhodopseudomonas palustris BisB5 glyoxalase/bleomycin resistance protein/dioxygenase YP_568557.1 1584805 R 316057 CDS YP_568558.1 91975899 4021897 1585398..1585685 1 NC_007958.1 cupin 2 barrel domain-containing protein 1585685 4021897 RPD_1420 Rhodopseudomonas palustris BisB5 cupin 2 barrel domain-containing protein YP_568558.1 1585398 D 316057 CDS YP_568559.1 91975900 4021898 1585832..1586707 1 NC_007958.1 hypothetical protein 1586707 4021898 RPD_1421 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568559.1 1585832 D 316057 CDS YP_568560.1 91975901 4021899 complement(1586887..1587189) 1 NC_007958.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1587189 rpsU 4021899 rpsU Rhodopseudomonas palustris BisB5 30S ribosomal protein S21 YP_568560.1 1586887 R 316057 CDS YP_568561.1 91975902 4021900 complement(1587385..1588479) 1 NC_007958.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1588479 4021900 RPD_1423 Rhodopseudomonas palustris BisB5 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_568561.1 1587385 R 316057 CDS YP_568562.1 91975903 4021901 complement(1588476..1588940) 1 NC_007958.1 phosphoribosylaminoimidazole carboxylase, catalytic subunit 1588940 4021901 RPD_1424 Rhodopseudomonas palustris BisB5 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_568562.1 1588476 R 316057 CDS YP_568563.1 91975904 4021902 1589105..1589848 1 NC_007958.1 GGDEF domain-containing protein 1589848 4021902 RPD_1425 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_568563.1 1589105 D 316057 CDS YP_568564.1 91975905 4021903 complement(1589838..1590044) 1 NC_007958.1 hypothetical protein 1590044 4021903 RPD_1426 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568564.1 1589838 R 316057 CDS YP_568565.1 91975906 4021904 1590427..1590609 1 NC_007958.1 hypothetical protein 1590609 4021904 RPD_1427 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568565.1 1590427 D 316057 CDS YP_568566.1 91975907 4021905 complement(1590970..1592076) 1 NC_007958.1 FAD dependent oxidoreductase 1592076 4021905 RPD_1428 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_568566.1 1590970 R 316057 CDS YP_568567.1 91975908 4021906 1592248..1594932 1 NC_007958.1 GGDEF domain-containing protein 1594932 4021906 RPD_1429 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_568567.1 1592248 D 316057 CDS YP_568568.1 91975909 4021907 1595044..1596192 1 NC_007958.1 spermidine/putrescine ABC transporter ATP-binding subunit 1596192 4021907 RPD_1430 Rhodopseudomonas palustris BisB5 spermidine/putrescine ABC transporter ATP-binding subunit YP_568568.1 1595044 D 316057 CDS YP_568569.1 91975910 4021908 1596203..1597117 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 1597117 4021908 RPD_1431 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_568569.1 1596203 D 316057 CDS YP_568570.1 91975911 4021909 1597117..1597932 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 1597932 4021909 RPD_1432 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_568570.1 1597117 D 316057 CDS YP_568571.1 91975912 4021910 complement(1598100..1600067) 1 NC_007958.1 AsmA 1600067 4021910 RPD_1433 Rhodopseudomonas palustris BisB5 AsmA YP_568571.1 1598100 R 316057 CDS YP_568572.1 91975913 4021911 1600263..1600979 1 NC_007958.1 3-oxoacid CoA-transferase subunit A 1600979 4021911 RPD_1434 Rhodopseudomonas palustris BisB5 3-oxoacid CoA-transferase subunit A YP_568572.1 1600263 D 316057 CDS YP_568573.1 91975914 4021912 1600991..1601641 1 NC_007958.1 3-oxoacid CoA-transferase subunit B 1601641 4021912 RPD_1435 Rhodopseudomonas palustris BisB5 3-oxoacid CoA-transferase subunit B YP_568573.1 1600991 D 316057 CDS YP_568574.1 91975915 4021913 1602123..1604852 1 NC_007958.1 ATPase, E1-E2 type 1604852 4021913 RPD_1436 Rhodopseudomonas palustris BisB5 ATPase, E1-E2 type YP_568574.1 1602123 D 316057 CDS YP_568575.1 91975916 4021914 complement(1604891..1605544) 1 NC_007958.1 hypothetical protein 1605544 4021914 RPD_1437 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568575.1 1604891 R 316057 CDS YP_568576.1 91975917 4021915 complement(1605695..1607341) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 1607341 4021915 RPD_1438 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_568576.1 1605695 R 316057 CDS YP_568577.1 91975918 4021916 complement(1607588..1608601) 1 NC_007958.1 extracellular solute-binding protein 1608601 4021916 RPD_1439 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_568577.1 1607588 R 316057 CDS YP_568578.1 91975919 4021917 complement(1608815..1609048) 1 NC_007958.1 hypothetical protein 1609048 4021917 RPD_1440 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568578.1 1608815 R 316057 CDS YP_568579.1 91975920 4021918 complement(1609214..1610836) 1 NC_007958.1 beta-lactamase-like protein 1610836 4021918 RPD_1441 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_568579.1 1609214 R 316057 CDS YP_568580.1 91975921 4021919 complement(1610833..1611747) 1 NC_007958.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 1611747 4021919 RPD_1442 Rhodopseudomonas palustris BisB5 phosphoribosylpyrophosphate synthetase YP_568580.1 1610833 R 316057 CDS YP_568581.1 91975922 4021920 complement(1611744..1613288) 1 NC_007958.1 catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 1613288 4021920 RPD_1443 Rhodopseudomonas palustris BisB5 thymidine phosphorylase YP_568581.1 1611744 R 316057 CDS YP_568582.1 91975923 4021921 complement(1613454..1614164) 1 NC_007958.1 Crp/Fnr family transcriptional regulator 1614164 4021921 RPD_1444 Rhodopseudomonas palustris BisB5 Crp/Fnr family transcriptional regulator YP_568582.1 1613454 R 316057 CDS YP_568583.1 91975924 4021922 complement(1614258..1614659) 1 NC_007958.1 PilT protein-like protein 1614659 4021922 RPD_1445 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_568583.1 1614258 R 316057 CDS YP_568584.1 91975925 4021923 complement(1614656..1614907) 1 NC_007958.1 Rv0623-like transcription factor 1614907 4021923 RPD_1446 Rhodopseudomonas palustris BisB5 Rv0623-like transcription factor YP_568584.1 1614656 R 316057 CDS YP_568585.1 91975926 4021924 complement(1615136..1618741) 1 NC_007958.1 histidine kinase A-like 1618741 4021924 RPD_1447 Rhodopseudomonas palustris BisB5 histidine kinase A-like YP_568585.1 1615136 R 316057 CDS YP_568586.1 91975927 4021925 1619087..1619470 1 NC_007958.1 phasin 2 1619470 4021925 RPD_1448 Rhodopseudomonas palustris BisB5 phasin 2 YP_568586.1 1619087 D 316057 CDS YP_568587.1 91975928 4021926 1619716..1620147 1 NC_007958.1 phasin 2 1620147 4021926 RPD_1449 Rhodopseudomonas palustris BisB5 phasin 2 YP_568587.1 1619716 D 316057 CDS YP_568588.1 91975929 4021928 1620888..1621277 1 NC_007958.1 hypothetical protein 1621277 4021928 RPD_1450 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568588.1 1620888 D 316057 CDS YP_568589.1 91975930 4021929 1621426..1622106 1 NC_007958.1 cobyrinic acid a,c-diamide synthase 1622106 4021929 RPD_1451 Rhodopseudomonas palustris BisB5 cobyrinic acid a,c-diamide synthase YP_568589.1 1621426 D 316057 CDS YP_568590.1 91975931 4021930 complement(1622444..1623337) 1 NC_007958.1 LysR family transcriptional regulator 1623337 4021930 RPD_1452 Rhodopseudomonas palustris BisB5 LysR family transcriptional regulator YP_568590.1 1622444 R 316057 CDS YP_568591.1 91975932 4021931 complement(1623370..1624335) 1 NC_007958.1 thioredoxin reductase 1624335 4021931 RPD_1453 Rhodopseudomonas palustris BisB5 thioredoxin reductase YP_568591.1 1623370 R 316057 CDS YP_568592.1 91975933 4021932 1624587..1625069 1 NC_007958.1 AsnC family transcriptional regulator 1625069 4021932 RPD_1454 Rhodopseudomonas palustris BisB5 AsnC family transcriptional regulator YP_568592.1 1624587 D 316057 CDS YP_568593.1 91975934 4021933 complement(1625090..1625500) 1 NC_007958.1 DoxX 1625500 4021933 RPD_1455 Rhodopseudomonas palustris BisB5 DoxX YP_568593.1 1625090 R 316057 CDS YP_568594.1 91975935 4021934 complement(1625785..1626282) 1 NC_007958.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1626282 greA 4021934 greA Rhodopseudomonas palustris BisB5 transcription elongation factor GreA YP_568594.1 1625785 R 316057 CDS YP_568595.1 91975936 4021935 complement(1626491..1629820) 1 NC_007958.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1629820 carB 4021935 carB Rhodopseudomonas palustris BisB5 carbamoyl phosphate synthase large subunit YP_568595.1 1626491 R 316057 CDS YP_568596.1 91975937 4021937 1630304..1631014 1 NC_007958.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1631014 4021937 RPD_1458 Rhodopseudomonas palustris BisB5 methionine sulfoxide reductase A YP_568596.1 1630304 D 316057 CDS YP_568597.1 91975938 4021938 1631046..1631459 1 NC_007958.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1631459 4021938 RPD_1459 Rhodopseudomonas palustris BisB5 methionine sulfoxide reductase B YP_568597.1 1631046 D 316057 CDS YP_568598.1 91975939 4021939 1631588..1631752 1 NC_007958.1 hypothetical protein 1631752 4021939 RPD_1460 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568598.1 1631588 D 316057 CDS YP_568599.1 91975940 4021940 1631940..1632218 1 NC_007958.1 hypothetical protein 1632218 4021940 RPD_1461 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568599.1 1631940 D 316057 CDS YP_568600.1 91975941 4021941 complement(1632250..1632621) 1 NC_007958.1 hypothetical protein 1632621 4021941 RPD_1462 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568600.1 1632250 R 316057 CDS YP_568601.1 91975942 4021942 1632836..1633237 1 NC_007958.1 hypothetical protein 1633237 4021942 RPD_1463 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568601.1 1632836 D 316057 CDS YP_568602.1 91975943 4021943 complement(1633440..1634966) 1 NC_007958.1 phosphoglucomutase/phosphomannomutase alpha/beta/subunit 1634966 4021943 RPD_1464 Rhodopseudomonas palustris BisB5 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_568602.1 1633440 R 316057 CDS YP_568603.1 91975944 4021944 complement(1635067..1635786) 1 NC_007958.1 transglutaminase-like protein 1635786 4021944 RPD_1465 Rhodopseudomonas palustris BisB5 transglutaminase-like protein YP_568603.1 1635067 R 316057 CDS YP_568604.1 91975945 4021945 complement(1635803..1636030) 1 NC_007958.1 hypothetical protein 1636030 4021945 RPD_1466 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568604.1 1635803 R 316057 CDS YP_568605.1 91975946 4021946 complement(1636134..1636412) 1 NC_007958.1 hypothetical protein 1636412 4021946 RPD_1467 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568605.1 1636134 R 316057 CDS YP_568606.1 91975947 4021947 complement(1636486..1637508) 1 NC_007958.1 alpha/beta hydrolase fold protein 1637508 4021947 RPD_1468 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_568606.1 1636486 R 316057 CDS YP_568607.1 91975948 4021948 1637656..1638921 1 NC_007958.1 secretion protein HlyD 1638921 4021948 RPD_1469 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_568607.1 1637656 D 316057 CDS YP_568608.1 91975949 4021949 1638930..1640144 1 NC_007958.1 hypothetical protein 1640144 4021949 RPD_1470 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568608.1 1638930 D 316057 CDS YP_568609.1 91975950 4021950 1640137..1640835 1 NC_007958.1 ABC transporter-like protein 1640835 4021950 RPD_1471 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568609.1 1640137 D 316057 CDS YP_568610.1 91975951 4021951 complement(1641201..1641575) 1 NC_007958.1 hypothetical protein 1641575 4021951 RPD_1472 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568610.1 1641201 R 316057 CDS YP_568611.1 91975952 4021952 complement(1641660..1642880) 1 NC_007958.1 putative urea/short-chain binding protein of ABC transporter 1642880 4021952 RPD_1473 Rhodopseudomonas palustris BisB5 putative urea/short-chain binding protein of ABC transporter YP_568611.1 1641660 R 316057 CDS YP_568612.1 91975953 4021953 1642919..1643260 1 NC_007958.1 hypothetical protein 1643260 4021953 RPD_1474 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568612.1 1642919 D 316057 CDS YP_568613.1 91975954 4021954 1643257..1644054 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1644054 4021954 RPD_1475 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_568613.1 1643257 D 316057 CDS YP_568614.1 91975955 4021955 1644056..1644808 1 NC_007958.1 hypothetical protein 1644808 4021955 RPD_1476 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568614.1 1644056 D 316057 CDS YP_568615.1 91975956 4021956 complement(1644739..1645962) 1 NC_007958.1 GGDEF domain-containing protein 1645962 4021956 RPD_1477 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_568615.1 1644739 R 316057 CDS YP_568616.1 91975957 4021957 1646314..1646682 1 NC_007958.1 putative 6-pyruvoyl tetrahydropterin synthase 1646682 4021957 RPD_1478 Rhodopseudomonas palustris BisB5 putative 6-pyruvoyl tetrahydropterin synthase YP_568616.1 1646314 D 316057 CDS YP_568617.1 91975958 4021958 complement(1646741..1647334) 1 NC_007958.1 hemerythrin HHE cation binding region 1647334 4021958 RPD_1479 Rhodopseudomonas palustris BisB5 hemerythrin HHE cation binding region YP_568617.1 1646741 R 316057 CDS YP_568618.1 91975959 4021959 complement(1647469..1649904) 1 NC_007958.1 heavy metal translocating P-type ATPase 1649904 4021959 RPD_1480 Rhodopseudomonas palustris BisB5 heavy metal translocating P-type ATPase YP_568618.1 1647469 R 316057 CDS YP_568619.1 91975960 4021960 1649958..1650233 1 NC_007958.1 hypothetical protein 1650233 4021960 RPD_1481 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568619.1 1649958 D 316057 CDS YP_568620.1 91975961 4021961 complement(1650282..1650938) 1 NC_007958.1 hypothetical protein 1650938 4021961 RPD_1482 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568620.1 1650282 R 316057 CDS YP_568621.1 91975962 4021962 complement(1651286..1651828) 1 NC_007958.1 glyoxalase/bleomycin resistance protein/dioxygenase 1651828 4021962 RPD_1483 Rhodopseudomonas palustris BisB5 glyoxalase/bleomycin resistance protein/dioxygenase YP_568621.1 1651286 R 316057 CDS YP_568622.1 91975963 4021963 complement(1651988..1652290) 1 NC_007958.1 hypothetical protein 1652290 4021963 RPD_1484 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568622.1 1651988 R 316057 CDS YP_568623.1 91975964 4021964 complement(1652530..1653879) 1 NC_007958.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1653879 4021964 RPD_1485 Rhodopseudomonas palustris BisB5 coproporphyrinogen III oxidase YP_568623.1 1652530 R 316057 CDS YP_568624.1 91975965 4021965 complement(1653907..1654617) 1 NC_007958.1 bacteriochlorophyll 4-vinyl reductase 1654617 4021965 RPD_1486 Rhodopseudomonas palustris BisB5 bacteriochlorophyll 4-vinyl reductase YP_568624.1 1653907 R 316057 CDS YP_568625.1 91975966 4021966 complement(1654589..1656292) 1 NC_007958.1 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 1656292 4021966 RPD_1487 Rhodopseudomonas palustris BisB5 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase YP_568625.1 1654589 R 316057 CDS YP_568626.1 91975967 4021967 complement(1656450..1656881) 1 NC_007958.1 hypothetical protein 1656881 4021967 RPD_1488 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568626.1 1656450 R 316057 CDS YP_568627.1 91975968 4021968 1657124..1657864 1 NC_007958.1 metallophosphoesterase 1657864 4021968 RPD_1489 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_568627.1 1657124 D 316057 CDS YP_568628.1 91975969 4021969 1657870..1659309 1 NC_007958.1 serine/threonine protein kinase 1659309 4021969 RPD_1490 Rhodopseudomonas palustris BisB5 serine/threonine protein kinase YP_568628.1 1657870 D 316057 CDS YP_568629.1 91975970 4021970 complement(1659380..1660030) 1 NC_007958.1 transport-associated protein 1660030 4021970 RPD_1491 Rhodopseudomonas palustris BisB5 transport-associated protein YP_568629.1 1659380 R 316057 CDS YP_568630.1 91975971 4021971 1660408..1662762 1 NC_007958.1 putative phosphoketolase 1662762 4021971 RPD_1492 Rhodopseudomonas palustris BisB5 putative phosphoketolase YP_568630.1 1660408 D 316057 CDS YP_568631.1 91975972 4021972 1662935..1663435 1 NC_007958.1 response regulator receiver 1663435 4021972 RPD_1493 Rhodopseudomonas palustris BisB5 response regulator receiver YP_568631.1 1662935 D 316057 CDS YP_568632.1 91975973 4021973 1664085..1664963 1 NC_007958.1 protein-glutamate O-methyltransferase 1664963 4021973 RPD_1494 Rhodopseudomonas palustris BisB5 protein-glutamate O-methyltransferase YP_568632.1 1664085 D 316057 CDS YP_568633.1 91975974 4021974 1664976..1665296 1 NC_007958.1 hypothetical protein 1665296 4021974 RPD_1495 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568633.1 1664976 D 316057 CDS YP_568634.1 91975975 4021975 1665443..1666684 1 NC_007958.1 response regulator and cylclic diguanylate phosphodiesterase 1666684 4021975 RPD_1496 Rhodopseudomonas palustris BisB5 response regulator and cylclic diguanylate phosphodiesterase YP_568634.1 1665443 D 316057 CDS YP_568635.1 91975976 4021976 complement(1666735..1669377) 1 NC_007958.1 multi-sensor hybrid histidine kinase 1669377 4021976 RPD_1497 Rhodopseudomonas palustris BisB5 multi-sensor hybrid histidine kinase YP_568635.1 1666735 R 316057 CDS YP_568636.1 91975977 4021977 complement(1669374..1670429) 1 NC_007958.1 hypothetical protein 1670429 4021977 RPD_1498 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568636.1 1669374 R 316057 CDS YP_568637.1 91975978 4021978 1670713..1671342 1 NC_007958.1 LuxR family two component transcriptional regulator 1671342 4021978 RPD_1499 Rhodopseudomonas palustris BisB5 LuxR family two component transcriptional regulator YP_568637.1 1670713 D 316057 CDS YP_568638.1 91975979 4021979 complement(1671362..1672144) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 1672144 4021979 RPD_1500 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568638.1 1671362 R 316057 CDS YP_568639.1 91975980 4021980 1672261..1673022 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 1673022 4021980 RPD_1501 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568639.1 1672261 D 316057 CDS YP_568640.1 91975981 4021981 complement(1673176..1674783) 1 NC_007958.1 glucose-methanol-choline oxidoreductase 1674783 4021981 RPD_1502 Rhodopseudomonas palustris BisB5 glucose-methanol-choline oxidoreductase YP_568640.1 1673176 R 316057 CDS YP_568641.1 91975982 4021982 complement(1674859..1676292) 1 NC_007958.1 aldehyde dehydrogenase 1676292 4021982 RPD_1503 Rhodopseudomonas palustris BisB5 aldehyde dehydrogenase YP_568641.1 1674859 R 316057 CDS YP_568642.1 91975983 4021984 complement(1676988..1677413) 1 NC_007958.1 regulatory protein MerR 1677413 4021984 RPD_1504 Rhodopseudomonas palustris BisB5 regulatory protein MerR YP_568642.1 1676988 R 316057 CDS YP_568643.1 91975984 4021985 1677478..1679628 1 NC_007958.1 heavy metal translocating P-type ATPase 1679628 4021985 RPD_1505 Rhodopseudomonas palustris BisB5 heavy metal translocating P-type ATPase YP_568643.1 1677478 D 316057 CDS YP_568644.1 91975985 4021986 complement(1680216..1680629) 1 NC_007958.1 thioesterase 1680629 4021986 RPD_1506 Rhodopseudomonas palustris BisB5 thioesterase YP_568644.1 1680216 R 316057 CDS YP_568645.1 91975986 4021987 1681050..1683797 1 NC_007958.1 molybdopterin oxidoreductase 1683797 4021987 RPD_1507 Rhodopseudomonas palustris BisB5 molybdopterin oxidoreductase YP_568645.1 1681050 D 316057 CDS YP_568646.1 91975987 4021988 1683794..1684447 1 NC_007958.1 4Fe-4S ferredoxin 1684447 4021988 RPD_1508 Rhodopseudomonas palustris BisB5 4Fe-4S ferredoxin YP_568646.1 1683794 D 316057 CDS YP_568647.1 91975988 4021989 1684444..1685331 1 NC_007958.1 phenylacetyl-CoA:acceptor oxidoreductase 1685331 4021989 RPD_1509 Rhodopseudomonas palustris BisB5 phenylacetyl-CoA:acceptor oxidoreductase YP_568647.1 1684444 D 316057 CDS YP_568648.1 91975989 4021990 1685383..1685955 1 NC_007958.1 pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase subunit gamma 1685955 4021990 RPD_1510 Rhodopseudomonas palustris BisB5 pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase subunit gamma YP_568648.1 1685383 D 316057 CDS YP_568649.1 91975990 4021991 1685952..1686254 1 NC_007958.1 pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase subunit delta 1686254 4021991 RPD_1511 Rhodopseudomonas palustris BisB5 pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase subunit delta YP_568649.1 1685952 D 316057 CDS YP_568650.1 91975991 4021992 1686251..1687495 1 NC_007958.1 pyruvate flavodoxin/ferredoxin oxidoreductase-like 1687495 4021992 RPD_1512 Rhodopseudomonas palustris BisB5 pyruvate flavodoxin/ferredoxin oxidoreductase-like YP_568650.1 1686251 D 316057 CDS YP_568651.1 91975992 4021993 1687506..1688753 1 NC_007958.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1688753 4021993 RPD_1513 Rhodopseudomonas palustris BisB5 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_568651.1 1687506 D 316057 CDS YP_568652.1 91975993 4021994 1688756..1690084 1 NC_007958.1 thiamine pyrophosphate enzyme-like protein 1690084 4021994 RPD_1514 Rhodopseudomonas palustris BisB5 thiamine pyrophosphate enzyme-like protein YP_568652.1 1688756 D 316057 CDS YP_568653.1 91975994 4021995 1690219..1691535 1 NC_007958.1 phenylacetate-CoA ligase 1691535 4021995 RPD_1515 Rhodopseudomonas palustris BisB5 phenylacetate-CoA ligase YP_568653.1 1690219 D 316057 CDS YP_568654.1 91975995 4021996 1691569..1692444 1 NC_007958.1 inner-membrane translocator 1692444 4021996 RPD_1516 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568654.1 1691569 D 316057 CDS YP_568655.1 91975996 4021997 1692441..1693370 1 NC_007958.1 inner-membrane translocator 1693370 4021997 RPD_1517 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568655.1 1692441 D 316057 CDS YP_568656.1 91975997 4021998 1693370..1694131 1 NC_007958.1 ABC transporter-like protein 1694131 4021998 RPD_1518 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568656.1 1693370 D 316057 CDS YP_568657.1 91975998 4021999 1694137..1694931 1 NC_007958.1 ABC transporter-like protein 1694931 4021999 RPD_1519 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568657.1 1694137 D 316057 CDS YP_568658.1 91975999 4022000 1694986..1696131 1 NC_007958.1 extracellular ligand-binding receptor 1696131 4022000 RPD_1520 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_568658.1 1694986 D 316057 CDS YP_568659.1 91976000 4022001 1696295..1697233 1 NC_007958.1 phenylacetic acid degradation operon negative regulatory protein PaaX 1697233 4022001 RPD_1521 Rhodopseudomonas palustris BisB5 phenylacetic acid degradation operon negative regulatory protein PaaX YP_568659.1 1696295 D 316057 CDS YP_568660.1 91976001 4022002 1697360..1698085 1 NC_007958.1 cyclic nucleotide-binding protein 1698085 4022002 RPD_1522 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_568660.1 1697360 D 316057 CDS YP_568661.1 91976002 4022003 complement(1698123..1699109) 1 NC_007958.1 molybdopterin dehydrogenase 1699109 4022003 RPD_1523 Rhodopseudomonas palustris BisB5 molybdopterin dehydrogenase YP_568661.1 1698123 R 316057 CDS YP_568662.1 91976003 4022004 complement(1699106..1701442) 1 NC_007958.1 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 1701442 4022004 RPD_1524 Rhodopseudomonas palustris BisB5 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_568662.1 1699106 R 316057 CDS YP_568663.1 91976004 4022005 complement(1701439..1701969) 1 NC_007958.1 (2Fe-2S)-binding protein 1701969 4022005 RPD_1525 Rhodopseudomonas palustris BisB5 (2Fe-2S)-binding protein YP_568663.1 1701439 R 316057 CDS YP_568664.1 91976005 4022006 1702098..1703660 1 NC_007958.1 benzoate-CoA ligase family 1703660 4022006 RPD_1526 Rhodopseudomonas palustris BisB5 benzoate-CoA ligase family YP_568664.1 1702098 D 316057 CDS YP_568665.1 91976006 4022007 1703826..1704782 1 NC_007958.1 GCN5-like N-acetyltransferase 1704782 4022007 RPD_1527 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_568665.1 1703826 D 316057 CDS YP_568666.1 91976007 4022008 1704794..1705300 1 NC_007958.1 GCN5-like N-acetyltransferase 1705300 4022008 RPD_1528 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_568666.1 1704794 D 316057 CDS YP_568667.1 91976008 4022009 1705376..1705840 1 NC_007958.1 hypothetical protein 1705840 4022009 RPD_1529 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568667.1 1705376 D 316057 CDS YP_568668.1 91976009 4022010 complement(1705904..1706440) 1 NC_007958.1 rubrerythrin 1706440 4022010 RPD_1530 Rhodopseudomonas palustris BisB5 rubrerythrin YP_568668.1 1705904 R 316057 CDS YP_568669.1 91976010 4022011 complement(1706437..1707276) 1 NC_007958.1 pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase subunit beta 1707276 4022011 RPD_1531 Rhodopseudomonas palustris BisB5 pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase subunit beta YP_568669.1 1706437 R 316057 CDS YP_568670.1 91976011 4022012 complement(1707273..1709006) 1 NC_007958.1 pyruvate flavodoxin/ferredoxin oxidoreductase-like 1709006 4022012 RPD_1532 Rhodopseudomonas palustris BisB5 pyruvate flavodoxin/ferredoxin oxidoreductase-like YP_568670.1 1707273 R 316057 CDS YP_568671.1 91976012 4022013 complement(1709085..1709330) 1 NC_007958.1 4Fe-4S ferredoxin 1709330 4022013 RPD_1533 Rhodopseudomonas palustris BisB5 4Fe-4S ferredoxin YP_568671.1 1709085 R 316057 CDS YP_568672.1 91976013 4022014 complement(1709363..1710937) 1 NC_007958.1 benzoate-CoA ligase family 1710937 4022014 RPD_1534 Rhodopseudomonas palustris BisB5 benzoate-CoA ligase family YP_568672.1 1709363 R 316057 CDS YP_568673.1 91976014 4022015 complement(1711043..1711876) 1 NC_007958.1 benzoyl-CoA reductase subunit D 1711876 4022015 RPD_1535 Rhodopseudomonas palustris BisB5 benzoyl-CoA reductase subunit D YP_568673.1 1711043 R 316057 CDS YP_568674.1 91976015 4022016 complement(1711889..1713202) 1 NC_007958.1 benzoyl-CoA reductase subunit A 1713202 4022016 RPD_1536 Rhodopseudomonas palustris BisB5 benzoyl-CoA reductase subunit A YP_568674.1 1711889 R 316057 CDS YP_568675.1 91976016 4022017 complement(1713213..1714523) 1 NC_007958.1 benzoyl-CoA reductase subunit B 1714523 4022017 RPD_1537 Rhodopseudomonas palustris BisB5 benzoyl-CoA reductase subunit B YP_568675.1 1713213 R 316057 CDS YP_568676.1 91976017 4022018 complement(1714520..1715704) 1 NC_007958.1 benzoyl-CoA reductase subunit C 1715704 4022018 RPD_1538 Rhodopseudomonas palustris BisB5 benzoyl-CoA reductase subunit C YP_568676.1 1714520 R 316057 CDS YP_568677.1 91976018 4022019 complement(1715911..1716930) 1 NC_007958.1 zinc-binding alcohol dehydrogenase 1716930 4022019 RPD_1539 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_568677.1 1715911 R 316057 CDS YP_568678.1 91976019 4022020 complement(1717001..1717528) 1 NC_007958.1 regulatory protein MarR 1717528 4022020 RPD_1540 Rhodopseudomonas palustris BisB5 regulatory protein MarR YP_568678.1 1717001 R 316057 CDS YP_568679.1 91976020 4022021 1717662..1718429 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 1718429 4022021 RPD_1541 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568679.1 1717662 D 316057 CDS YP_568680.1 91976021 4022022 1718457..1719239 1 NC_007958.1 naphthoate synthase 1719239 4022022 RPD_1542 Rhodopseudomonas palustris BisB5 naphthoate synthase YP_568680.1 1718457 D 316057 CDS YP_568681.1 91976022 4022023 1719311..1720462 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 1720462 4022023 RPD_1543 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_568681.1 1719311 D 316057 CDS YP_568682.1 91976023 4022024 1720511..1722154 1 NC_007958.1 AliA; in Rhodopseudomonas palustris, this enzyme was found to act on 3-chlorobenzoate and allows the organism to grow on this substrate; cyclohexanecarboxylate-CoA ligase 1722154 4022024 RPD_1544 Rhodopseudomonas palustris BisB5 cyclohexanecarboxylate-CoA ligase YP_568682.1 1720511 D 316057 CDS YP_568683.1 91976024 4022025 1722244..1723020 1 NC_007958.1 enoyl-CoA hydratase/isomerase 1723020 4022025 RPD_1545 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_568683.1 1722244 D 316057 CDS YP_568684.1 91976025 4022026 complement(1723107..1725428) 1 NC_007958.1 von Willebrand factor, type A 1725428 4022026 RPD_1546 Rhodopseudomonas palustris BisB5 von Willebrand factor, type A YP_568684.1 1723107 R 316057 CDS YP_568685.1 91976026 4022027 complement(1725468..1726277) 1 NC_007958.1 ATPase 1726277 4022027 RPD_1547 Rhodopseudomonas palustris BisB5 ATPase YP_568685.1 1725468 R 316057 CDS YP_568686.1 91976027 4022028 complement(1726429..1726791) 1 NC_007958.1 ribulose-bisphosphate carboxylase 1726791 4022028 RPD_1548 Rhodopseudomonas palustris BisB5 ribulose-bisphosphate carboxylase YP_568686.1 1726429 R 316057 CDS YP_568687.1 91976028 4022029 complement(1726832..1728250) 1 NC_007958.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 1728250 rbcL 4022029 rbcL Rhodopseudomonas palustris BisB5 ribulose bisophosphate carboxylase YP_568687.1 1726832 R 316057 CDS YP_568688.1 91976029 4022030 1728366..1729325 1 NC_007958.1 LysR, substrate-binding 1729325 4022030 RPD_1550 Rhodopseudomonas palustris BisB5 LysR, substrate-binding YP_568688.1 1728366 D 316057 CDS YP_568689.1 91976030 4022031 1729496..1731586 1 NC_007958.1 carbon starvation protein CstA 1731586 4022031 RPD_1551 Rhodopseudomonas palustris BisB5 carbon starvation protein CstA YP_568689.1 1729496 D 316057 CDS YP_568690.1 91976031 4022032 1731591..1731779 1 NC_007958.1 hypothetical protein 1731779 4022032 RPD_1552 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568690.1 1731591 D 316057 CDS YP_568691.1 91976032 4022033 complement(1731843..1732547) 1 NC_007958.1 regulatory protein TetR 1732547 4022033 RPD_1553 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_568691.1 1731843 R 316057 CDS YP_568692.1 91976033 4022034 1732792..1733343 1 NC_007958.1 cytochrome B561 1733343 4022034 RPD_1554 Rhodopseudomonas palustris BisB5 cytochrome B561 YP_568692.1 1732792 D 316057 CDS YP_568693.1 91976034 4022035 1733369..1734553 1 NC_007958.1 secretion protein HlyD 1734553 4022035 RPD_1555 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_568693.1 1733369 D 316057 CDS YP_568694.1 91976035 4022036 1734569..1737739 1 NC_007958.1 acriflavin resistance protein 1737739 4022036 RPD_1556 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_568694.1 1734569 D 316057 CDS YP_568695.1 91976036 4022037 1737828..1738055 1 NC_007958.1 hypothetical protein 1738055 4022037 RPD_1557 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568695.1 1737828 D 316057 CDS YP_568696.1 91976037 4022038 complement(1738068..1738733) 1 NC_007958.1 response regulator receiver 1738733 4022038 RPD_1558 Rhodopseudomonas palustris BisB5 response regulator receiver YP_568696.1 1738068 R 316057 CDS YP_568697.1 91976038 4022039 complement(1738915..1740324) 1 NC_007958.1 ATPase-like ATP-binding protein 1740324 4022039 RPD_1559 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_568697.1 1738915 R 316057 CDS YP_568698.1 91976039 4022040 1740702..1749986 1 NC_007958.1 heme peroxidase 1749986 4022040 RPD_1560 Rhodopseudomonas palustris BisB5 heme peroxidase YP_568698.1 1740702 D 316057 CDS YP_568699.1 91976040 4022041 1750060..1751811 1 NC_007958.1 Type I secretion system ATPase, PrtD 1751811 4022041 RPD_1561 Rhodopseudomonas palustris BisB5 Type I secretion system ATPase, PrtD YP_568699.1 1750060 D 316057 CDS YP_568700.1 91976041 4022042 1751808..1754117 1 NC_007958.1 RTX toxins and related Ca2+-binding proteins-like 1754117 4022042 RPD_1562 Rhodopseudomonas palustris BisB5 RTX toxins and related Ca2+-binding proteins-like YP_568700.1 1751808 D 316057 CDS YP_568701.1 91976042 4022043 1754138..1755493 1 NC_007958.1 Type I secretion membrane fusion protein, HlyD 1755493 4022043 RPD_1563 Rhodopseudomonas palustris BisB5 Type I secretion membrane fusion protein, HlyD YP_568701.1 1754138 D 316057 CDS YP_568702.1 91976043 4022044 complement(1755628..1756074) 1 NC_007958.1 GtrA-like protein 1756074 4022044 RPD_1564 Rhodopseudomonas palustris BisB5 GtrA-like protein YP_568702.1 1755628 R 316057 CDS YP_568703.1 91976044 4022045 complement(1756289..1757128) 1 NC_007958.1 ABC transporter-like protein 1757128 4022045 RPD_1565 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568703.1 1756289 R 316057 CDS YP_568704.1 91976045 4022046 complement(1757378..1758658) 1 NC_007958.1 putative branched-chain amino acid ABC transport system substrate-binding protein 1758658 4022046 RPD_1566 Rhodopseudomonas palustris BisB5 putative branched-chain amino acid ABC transport system substrate-binding protein YP_568704.1 1757378 R 316057 CDS YP_568705.1 91976046 4022047 complement(1758717..1759790) 1 NC_007958.1 inner-membrane translocator 1759790 4022047 RPD_1567 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568705.1 1758717 R 316057 CDS YP_568706.1 91976047 4022048 complement(1759895..1760788) 1 NC_007958.1 inner-membrane translocator 1760788 4022048 RPD_1568 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568706.1 1759895 R 316057 CDS YP_568707.1 91976048 4022049 complement(1760994..1762922) 1 NC_007958.1 AMP-dependent synthetase and ligase 1762922 4022049 RPD_1569 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_568707.1 1760994 R 316057 CDS YP_568708.1 91976049 4022050 complement(1762919..1763746) 1 NC_007958.1 ABC transporter-like protein 1763746 4022050 RPD_1570 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568708.1 1762919 R 316057 CDS YP_568709.1 91976050 4022051 1764242..1765303 1 NC_007958.1 dTDP-glucose 4,6-dehydratase 1765303 4022051 RPD_1571 Rhodopseudomonas palustris BisB5 dTDP-glucose 4,6-dehydratase YP_568709.1 1764242 D 316057 CDS YP_568710.1 91976051 4022052 1765326..1765883 1 NC_007958.1 dTDP-4-dehydrorhamnose 3,5-epimerase 1765883 4022052 RPD_1572 Rhodopseudomonas palustris BisB5 dTDP-4-dehydrorhamnose 3,5-epimerase YP_568710.1 1765326 D 316057 CDS YP_568711.1 91976052 4022053 1765887..1766783 1 NC_007958.1 dTDP-4-dehydrorhamnose reductase 1766783 4022053 RPD_1573 Rhodopseudomonas palustris BisB5 dTDP-4-dehydrorhamnose reductase YP_568711.1 1765887 D 316057 CDS YP_568712.1 91976053 4022054 1766799..1767677 1 NC_007958.1 glucose-1-phosphate thymidylyltransferase 1767677 4022054 RPD_1574 Rhodopseudomonas palustris BisB5 glucose-1-phosphate thymidylyltransferase YP_568712.1 1766799 D 316057 CDS YP_568713.1 91976054 4022055 complement(1767757..1769703) 1 NC_007958.1 hypothetical protein 1769703 4022055 RPD_1575 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568713.1 1767757 R 316057 CDS YP_568714.1 91976055 4022056 complement(1769846..1770541) 1 NC_007958.1 ABC transporter-like protein 1770541 4022056 RPD_1576 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568714.1 1769846 R 316057 CDS YP_568715.1 91976056 4022057 complement(1770541..1771290) 1 NC_007958.1 ABC transporter-like protein 1771290 4022057 RPD_1577 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568715.1 1770541 R 316057 CDS YP_568716.1 91976057 4022058 complement(1771287..1772588) 1 NC_007958.1 inner-membrane translocator 1772588 4022058 RPD_1578 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568716.1 1771287 R 316057 CDS YP_568717.1 91976058 4022059 complement(1772585..1773532) 1 NC_007958.1 inner-membrane translocator 1773532 4022059 RPD_1579 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568717.1 1772585 R 316057 CDS YP_568718.1 91976059 4022060 complement(1773661..1774890) 1 NC_007958.1 ABC transporter periplasmic branched chain amino acid binding protein 1774890 4022060 RPD_1580 Rhodopseudomonas palustris BisB5 ABC transporter periplasmic branched chain amino acid binding protein YP_568718.1 1773661 R 316057 CDS YP_568719.1 91976060 4022061 complement(1775149..1777593) 1 NC_007958.1 L-carnitine dehydratase/bile acid-inducible protein F 1777593 4022061 RPD_1581 Rhodopseudomonas palustris BisB5 L-carnitine dehydratase/bile acid-inducible protein F YP_568719.1 1775149 R 316057 CDS YP_568720.1 91976061 4022062 1777716..1777970 1 NC_007958.1 hypothetical protein 1777970 4022062 RPD_1582 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568720.1 1777716 D 316057 CDS YP_568721.1 91976062 4022063 1777946..1778809 1 NC_007958.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1778809 purU 4022063 purU Rhodopseudomonas palustris BisB5 formyltetrahydrofolate deformylase YP_568721.1 1777946 D 316057 CDS YP_568722.1 91976063 4022064 complement(1778837..1779424) 1 NC_007958.1 hypothetical protein 1779424 4022064 RPD_1584 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568722.1 1778837 R 316057 CDS YP_568723.1 91976064 4022065 complement(1779488..1779787) 1 NC_007958.1 hypothetical protein 1779787 4022065 RPD_1585 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568723.1 1779488 R 316057 CDS YP_568724.1 91976065 4022066 1780187..1781365 1 NC_007958.1 twin-arginine translocation pathway signal 1781365 4022066 RPD_1586 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_568724.1 1780187 D 316057 CDS YP_568725.1 91976066 4022067 1781521..1782387 1 NC_007958.1 inner-membrane translocator 1782387 4022067 RPD_1587 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568725.1 1781521 D 316057 CDS YP_568726.1 91976067 4022068 1782384..1783415 1 NC_007958.1 inner-membrane translocator 1783415 4022068 RPD_1588 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568726.1 1782384 D 316057 CDS YP_568727.1 91976068 4022069 1783412..1784164 1 NC_007958.1 ABC transporter-like protein 1784164 4022069 RPD_1589 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568727.1 1783412 D 316057 CDS YP_568728.1 91976069 4022070 1784173..1784895 1 NC_007958.1 ABC transporter-like protein 1784895 4022070 RPD_1590 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568728.1 1784173 D 316057 CDS YP_568729.1 91976070 4022071 1784916..1786034 1 NC_007958.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 1786034 4022071 RPD_1591 Rhodopseudomonas palustris BisB5 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_568729.1 1784916 D 316057 CDS YP_568730.1 91976071 4022072 1786146..1787186 1 NC_007958.1 glycosyl transferase family protein 1787186 4022072 RPD_1592 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_568730.1 1786146 D 316057 CDS YP_568731.1 91976072 4022073 complement(1787217..1788527) 1 NC_007958.1 UDP-glucose 6-dehydrogenase 1788527 4022073 RPD_1593 Rhodopseudomonas palustris BisB5 UDP-glucose 6-dehydrogenase YP_568731.1 1787217 R 316057 CDS YP_568732.1 91976073 4022074 1788719..1789861 1 NC_007958.1 hypothetical protein 1789861 4022074 RPD_1594 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568732.1 1788719 D 316057 CDS YP_568733.1 91976074 4022075 1790012..1791367 1 NC_007958.1 hypothetical protein 1791367 4022075 RPD_1595 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568733.1 1790012 D 316057 CDS YP_568734.1 91976075 4022076 1791427..1792623 1 NC_007958.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1792623 4022076 RPD_1596 Rhodopseudomonas palustris BisB5 S-adenosylmethionine synthetase YP_568734.1 1791427 D 316057 CDS YP_568735.1 91976076 4022077 1792960..1794375 1 NC_007958.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 1794375 4022077 RPD_1597 Rhodopseudomonas palustris BisB5 S-adenosyl-L-homocysteine hydrolase YP_568735.1 1792960 D 316057 CDS YP_568736.1 91976077 4022078 complement(1794568..1795272) 1 NC_007958.1 hypothetical protein 1795272 4022078 RPD_1598 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568736.1 1794568 R 316057 CDS YP_568737.1 91976078 4022079 complement(1795269..1795889) 1 NC_007958.1 ExsB 1795889 4022079 RPD_1599 Rhodopseudomonas palustris BisB5 ExsB YP_568737.1 1795269 R 316057 CDS YP_568738.1 91976079 4022080 complement(1795886..1797223) 1 NC_007958.1 PfkB family carbohydrate kinase 1797223 4022080 RPD_1600 Rhodopseudomonas palustris BisB5 PfkB family carbohydrate kinase YP_568738.1 1795886 R 316057 CDS YP_568739.1 91976080 4022081 complement(1797220..1797612) 1 NC_007958.1 hypothetical protein 1797612 4022081 RPD_1601 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568739.1 1797220 R 316057 CDS YP_568740.1 91976081 4022082 complement(1797887..1798294) 1 NC_007958.1 PilT protein-like protein 1798294 4022082 RPD_1602 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_568740.1 1797887 R 316057 CDS YP_568741.1 91976082 4022083 complement(1798294..1798551) 1 NC_007958.1 prevent-host-death protein 1798551 4022083 RPD_1603 Rhodopseudomonas palustris BisB5 prevent-host-death protein YP_568741.1 1798294 R 316057 CDS YP_568742.1 91976083 4022084 complement(1798928..1799161) 1 NC_007958.1 hypothetical protein 1799161 4022084 RPD_1604 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568742.1 1798928 R 316057 CDS YP_568743.1 91976084 4022085 1800000..1800209 1 NC_007958.1 hypothetical protein 1800209 4022085 RPD_1605 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568743.1 1800000 D 316057 CDS YP_568744.1 91976085 4022086 1800206..1800466 1 NC_007958.1 hypothetical protein 1800466 4022086 RPD_1606 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568744.1 1800206 D 316057 CDS YP_568745.1 91976086 4022087 complement(1800552..1801253) 1 NC_007958.1 fumarylacetoacetate (FAA) hydrolase 1801253 4022087 RPD_1607 Rhodopseudomonas palustris BisB5 fumarylacetoacetate (FAA) hydrolase YP_568745.1 1800552 R 316057 CDS YP_568746.1 91976087 4022088 complement(1801326..1803128) 1 NC_007958.1 ABC transporter-like protein 1803128 4022088 RPD_1608 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568746.1 1801326 R 316057 CDS YP_568747.1 91976088 4022089 complement(1803355..1804368) 1 NC_007958.1 UDP-glucose 4-epimerase 1804368 4022089 RPD_1609 Rhodopseudomonas palustris BisB5 UDP-glucose 4-epimerase YP_568747.1 1803355 R 316057 CDS YP_568748.1 91976089 4022090 1804556..1805500 1 NC_007958.1 lipopolysaccharide heptosyltransferase I 1805500 4022090 RPD_1610 Rhodopseudomonas palustris BisB5 lipopolysaccharide heptosyltransferase I YP_568748.1 1804556 D 316057 CDS YP_568749.1 91976090 4022091 complement(1805497..1806045) 1 NC_007958.1 HAD family hydrolase 1806045 4022091 RPD_1611 Rhodopseudomonas palustris BisB5 HAD family hydrolase YP_568749.1 1805497 R 316057 CDS YP_568750.1 91976091 4022092 complement(1806042..1806629) 1 NC_007958.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1806629 4022092 RPD_1612 Rhodopseudomonas palustris BisB5 phosphoheptose isomerase YP_568750.1 1806042 R 316057 CDS YP_568751.1 91976092 4022093 complement(1806700..1807776) 1 NC_007958.1 lipopolysaccharide heptosyltransferase II 1807776 4022093 RPD_1613 Rhodopseudomonas palustris BisB5 lipopolysaccharide heptosyltransferase II YP_568751.1 1806700 R 316057 CDS YP_568752.1 91976093 4022094 1807964..1808944 1 NC_007958.1 ADP-L-glycero-D-manno-heptose-6-epimerase 1808944 4022094 RPD_1614 Rhodopseudomonas palustris BisB5 ADP-L-glycero-D-manno-heptose-6-epimerase YP_568752.1 1807964 D 316057 CDS YP_568753.1 91976094 4022095 1808970..1810442 1 NC_007958.1 bifunctional ADP-heptose synthase 1810442 4022095 RPD_1615 Rhodopseudomonas palustris BisB5 bifunctional ADP-heptose synthase YP_568753.1 1808970 D 316057 CDS YP_568754.1 91976095 4022096 1810567..1812483 1 NC_007958.1 polysaccharide biosynthesis protein CapD 1812483 4022096 RPD_1616 Rhodopseudomonas palustris BisB5 polysaccharide biosynthesis protein CapD YP_568754.1 1810567 D 316057 CDS YP_568755.1 91976096 4022097 1812628..1813605 1 NC_007958.1 NAD-dependent epimerase/dehydratase 1813605 4022097 RPD_1617 Rhodopseudomonas palustris BisB5 NAD-dependent epimerase/dehydratase YP_568755.1 1812628 D 316057 CDS YP_568756.1 91976097 4022098 1813624..1815036 1 NC_007958.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1815036 4022098 RPD_1618 Rhodopseudomonas palustris BisB5 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_568756.1 1813624 D 316057 CDS YP_568757.1 91976098 4022099 1815209..1816207 1 NC_007958.1 oxidoreductase-like protein 1816207 4022099 RPD_1619 Rhodopseudomonas palustris BisB5 oxidoreductase-like protein YP_568757.1 1815209 D 316057 CDS YP_568758.1 91976099 4022100 1816276..1817427 1 NC_007958.1 DegT/DnrJ/EryC1/StrS aminotransferase 1817427 4022100 RPD_1620 Rhodopseudomonas palustris BisB5 DegT/DnrJ/EryC1/StrS aminotransferase YP_568758.1 1816276 D 316057 CDS YP_568759.1 91976100 4022101 1817487..1819016 1 NC_007958.1 integral membrane protein MviN 1819016 4022101 RPD_1621 Rhodopseudomonas palustris BisB5 integral membrane protein MviN YP_568759.1 1817487 D 316057 CDS YP_568760.1 91976101 4022102 complement(1819019..1820875) 1 NC_007958.1 carbamoyltransferase 1820875 4022102 RPD_1622 Rhodopseudomonas palustris BisB5 carbamoyltransferase YP_568760.1 1819019 R 316057 CDS YP_568761.1 91976102 4022103 1821251..1821544 1 NC_007958.1 hypothetical protein 1821544 4022103 RPD_1623 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568761.1 1821251 D 316057 CDS YP_568762.1 91976103 4022104 1821811..1824117 1 NC_007958.1 carbon-monoxide dehydrogenase 1824117 4022104 RPD_1624 Rhodopseudomonas palustris BisB5 carbon-monoxide dehydrogenase YP_568762.1 1821811 D 316057 CDS YP_568763.1 91976104 4022105 1824321..1824770 1 NC_007958.1 cytochrome c, class II 1824770 4022105 RPD_1625 Rhodopseudomonas palustris BisB5 cytochrome c, class II YP_568763.1 1824321 D 316057 CDS YP_568764.1 91976105 4022106 1824881..1825801 1 NC_007958.1 putative diheme cytochrome c-553 1825801 4022106 RPD_1626 Rhodopseudomonas palustris BisB5 putative diheme cytochrome c-553 YP_568764.1 1824881 D 316057 CDS YP_568765.1 91976106 4022107 complement(1825826..1826104) 1 NC_007958.1 regulatory protein AsnC/Lrp 1826104 4022107 RPD_1627 Rhodopseudomonas palustris BisB5 regulatory protein AsnC/Lrp YP_568765.1 1825826 R 316057 CDS YP_568766.1 91976107 4022108 1826221..1827021 1 NC_007958.1 phosphomethylpyrimidine kinase 1827021 4022108 RPD_1628 Rhodopseudomonas palustris BisB5 phosphomethylpyrimidine kinase YP_568766.1 1826221 D 316057 CDS YP_568767.1 91976108 4022109 1827117..1827773 1 NC_007958.1 phosphatidylethanolamine N-methyltransferase 1827773 4022109 RPD_1629 Rhodopseudomonas palustris BisB5 phosphatidylethanolamine N-methyltransferase YP_568767.1 1827117 D 316057 CDS YP_568768.1 91976109 4022110 1827827..1828624 1 NC_007958.1 metallophosphoesterase 1828624 4022110 RPD_1630 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_568768.1 1827827 D 316057 CDS YP_568769.1 91976110 4022111 1828624..1829682 1 NC_007958.1 group 1 glycosyl transferase 1829682 4022111 RPD_1631 Rhodopseudomonas palustris BisB5 group 1 glycosyl transferase YP_568769.1 1828624 D 316057 CDS YP_568770.1 91976111 4022112 1829736..1830722 1 NC_007958.1 pyridoxal-5'-phosphate-dependent enzyme subunit beta 1830722 4022112 RPD_1632 Rhodopseudomonas palustris BisB5 pyridoxal-5'-phosphate-dependent enzyme subunit beta YP_568770.1 1829736 D 316057 CDS YP_568771.1 91976112 4022113 complement(1830823..1832319) 1 NC_007958.1 hypothetical protein 1832319 4022113 RPD_1633 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568771.1 1830823 R 316057 CDS YP_568772.1 91976113 4022114 1832347..1833555 1 NC_007958.1 major facilitator transporter 1833555 4022114 RPD_1634 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_568772.1 1832347 D 316057 CDS YP_568773.1 91976114 4022115 complement(1833525..1834520) 1 NC_007958.1 mandelate racemase/muconate lactonizing enzyme 1834520 4022115 RPD_1635 Rhodopseudomonas palustris BisB5 mandelate racemase/muconate lactonizing enzyme YP_568773.1 1833525 R 316057 CDS YP_568774.1 91976115 4022116 1834627..1835778 1 NC_007958.1 hypothetical protein 1835778 4022116 RPD_1636 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568774.1 1834627 D 316057 CDS YP_568775.1 91976116 4022117 1835781..1836551 1 NC_007958.1 ABC transporter-like protein 1836551 4022117 RPD_1637 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568775.1 1835781 D 316057 CDS YP_568776.1 91976117 4022118 1836634..1837587 1 NC_007958.1 hypothetical protein 1837587 4022118 RPD_1638 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568776.1 1836634 D 316057 CDS YP_568777.1 91976118 4022119 complement(1838455..1840776) 1 NC_007958.1 hypothetical protein 1840776 4022119 RPD_1639 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568777.1 1838455 R 316057 CDS YP_568778.1 91976119 4022120 1841631..1844099 1 NC_007958.1 sulfatase 1844099 4022120 RPD_1640 Rhodopseudomonas palustris BisB5 sulfatase YP_568778.1 1841631 D 316057 CDS YP_568779.1 91976120 4022121 complement(1844370..1850717) 1 NC_007958.1 hypothetical protein 1850717 4022121 RPD_1641 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568779.1 1844370 R 316057 CDS YP_568780.1 91976121 4022122 1851135..1851479 1 NC_007958.1 hypothetical protein 1851479 4022122 RPD_1642 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568780.1 1851135 D 316057 CDS YP_568781.1 91976122 4022123 1851621..1851941 1 NC_007958.1 ferredoxin 1851941 4022123 RPD_1643 Rhodopseudomonas palustris BisB5 ferredoxin YP_568781.1 1851621 D 316057 CDS YP_568782.1 91976123 4022124 complement(1852095..1852550) 1 NC_007958.1 thioesterase superfamily protein 1852550 4022124 RPD_1644 Rhodopseudomonas palustris BisB5 thioesterase superfamily protein YP_568782.1 1852095 R 316057 CDS YP_568783.1 91976124 4022125 1852711..1853739 1 NC_007958.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1853739 4022125 RPD_1645 Rhodopseudomonas palustris BisB5 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_568783.1 1852711 D 316057 CDS YP_568784.1 91976125 4022126 complement(1853844..1854824) 1 NC_007958.1 NAD-dependent epimerase/dehydratase 1854824 4022126 RPD_1646 Rhodopseudomonas palustris BisB5 NAD-dependent epimerase/dehydratase YP_568784.1 1853844 R 316057 CDS YP_568785.1 91976126 4022127 complement(1854824..1855810) 1 NC_007958.1 GDP-mannose 4,6-dehydratase 1855810 4022127 RPD_1647 Rhodopseudomonas palustris BisB5 GDP-mannose 4,6-dehydratase YP_568785.1 1854824 R 316057 CDS YP_568786.1 91976127 4022128 complement(1856004..1857089) 1 NC_007958.1 glycosyl transferase family protein 1857089 4022128 RPD_1648 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_568786.1 1856004 R 316057 CDS YP_568787.1 91976128 4022129 1857299..1858648 1 NC_007958.1 group 1 glycosyl transferase 1858648 4022129 RPD_1649 Rhodopseudomonas palustris BisB5 group 1 glycosyl transferase YP_568787.1 1857299 D 316057 CDS YP_568788.1 91976129 4022130 1858656..1859963 1 NC_007958.1 hypothetical protein 1859963 4022130 RPD_1650 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568788.1 1858656 D 316057 CDS YP_568789.1 91976130 4022131 1860031..1860687 1 NC_007958.1 hypothetical protein 1860687 4022131 RPD_1651 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568789.1 1860031 D 316057 CDS YP_568790.1 91976131 4022132 complement(1860803..1863412) 1 NC_007958.1 hypothetical protein 1863412 4022132 RPD_1652 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568790.1 1860803 R 316057 CDS YP_568791.1 91976132 4022133 complement(1863431..1864252) 1 NC_007958.1 hypothetical protein 1864252 4022133 RPD_1653 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568791.1 1863431 R 316057 CDS YP_568792.1 91976133 4022134 1864347..1864601 1 NC_007958.1 hypothetical protein 1864601 4022134 RPD_1654 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568792.1 1864347 D 316057 CDS YP_568793.1 91976134 4022135 complement(1864673..1866676) 1 NC_007958.1 hypothetical protein 1866676 4022135 RPD_1655 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568793.1 1864673 R 316057 CDS YP_568794.1 91976135 4022136 complement(1866753..1867814) 1 NC_007958.1 hypothetical protein 1867814 4022136 RPD_1656 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568794.1 1866753 R 316057 CDS YP_568795.1 91976136 4022137 1868212..1868718 1 NC_007958.1 hypothetical protein 1868718 4022137 RPD_1657 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568795.1 1868212 D 316057 CDS YP_568796.1 91976137 4022138 complement(1868925..1869365) 1 NC_007958.1 hypothetical protein 1869365 4022138 RPD_1658 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568796.1 1868925 R 316057 CDS YP_568797.1 91976138 4022139 1869541..1870131 1 NC_007958.1 hypothetical protein 1870131 4022139 RPD_1659 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568797.1 1869541 D 316057 CDS YP_568798.1 91976139 4022140 complement(1870279..1870710) 1 NC_007958.1 hypothetical protein 1870710 4022140 RPD_1660 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568798.1 1870279 R 316057 CDS YP_568799.1 91976140 4022141 complement(1870914..1871444) 1 NC_007958.1 putative phosphohistidine phosphatase SixA 1871444 4022141 RPD_1661 Rhodopseudomonas palustris BisB5 putative phosphohistidine phosphatase SixA YP_568799.1 1870914 R 316057 CDS YP_568800.1 91976141 4022142 1871538..1872998 1 NC_007958.1 FAD dependent oxidoreductase 1872998 4022142 RPD_1662 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_568800.1 1871538 D 316057 CDS YP_568801.1 91976142 4022143 1873139..1873636 1 NC_007958.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1873636 4022143 RPD_1663 Rhodopseudomonas palustris BisB5 methionine sulfoxide reductase B YP_568801.1 1873139 D 316057 CDS YP_568802.1 91976143 4022144 1873798..1875309 1 NC_007958.1 hypothetical protein 1875309 4022144 RPD_1664 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568802.1 1873798 D 316057 CDS YP_568803.1 91976144 4022145 complement(1875326..1875598) 1 NC_007958.1 hypothetical protein 1875598 4022145 RPD_1665 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568803.1 1875326 R 316057 CDS YP_568804.1 91976145 4022146 complement(1875805..1880088) 1 NC_007958.1 ATPase-like ATP-binding protein 1880088 4022146 RPD_1666 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_568804.1 1875805 R 316057 CDS YP_568805.1 91976146 4022147 1880370..1882202 1 NC_007958.1 hypothetical protein 1882202 4022147 RPD_1667 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568805.1 1880370 D 316057 CDS YP_568806.1 91976147 4022148 1882247..1884118 1 NC_007958.1 flagellar hook-associated protein 1884118 4022148 RPD_1668 Rhodopseudomonas palustris BisB5 flagellar hook-associated protein YP_568806.1 1882247 D 316057 CDS YP_568807.1 91976148 4022149 1884126..1885733 1 NC_007958.1 hypothetical protein 1885733 4022149 RPD_1669 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568807.1 1884126 D 316057 CDS YP_568808.1 91976149 4022150 1886025..1888313 1 NC_007958.1 structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellin 1888313 4022150 RPD_1670 Rhodopseudomonas palustris BisB5 flagellin YP_568808.1 1886025 D 316057 CDS YP_568809.1 91976150 4022152 1891184..1891564 1 NC_007958.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA; Bradyrhizobium has one thick and several thin flagella, the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 1891564 flbT 4022152 flbT Rhodopseudomonas palustris BisB5 flagellar biosynthesis repressor FlbT YP_568809.1 1891184 D 316057 CDS YP_568810.1 91976151 4022153 1891567..1891935 1 NC_007958.1 acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar biosynthesis regulatory protein FlaF 1891935 flaF 4022153 flaF Rhodopseudomonas palustris BisB5 flagellar biosynthesis regulatory protein FlaF YP_568810.1 1891567 D 316057 CDS YP_568811.1 91976152 4022154 complement(1892033..1892467) 1 NC_007958.1 hypothetical protein 1892467 4022154 RPD_1674 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568811.1 1892033 R 316057 CDS YP_568812.1 91976153 4022155 complement(1892614..1893099) 1 NC_007958.1 hypothetical protein 1893099 4022155 RPD_1675 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568812.1 1892614 R 316057 CDS YP_568813.1 91976154 4022156 complement(1893117..1893461) 1 NC_007958.1 chemotactic signal-response protein CheL 1893461 4022156 RPD_1676 Rhodopseudomonas palustris BisB5 chemotactic signal-response protein CheL YP_568813.1 1893117 R 316057 CDS YP_568814.1 91976155 4022157 complement(1893458..1894579) 1 NC_007958.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1894579 flgI 4022157 flgI Rhodopseudomonas palustris BisB5 flagellar basal body P-ring protein YP_568814.1 1893458 R 316057 CDS YP_568815.1 91976156 4022158 1894890..1895306 1 NC_007958.1 regulator of the sigma 54 transcriptional activator FlbD; represses FlbD when the class II flagellar structure is absent and activates FlbD when the structure is present; flagellar assembly regulator FliX 1895306 fliX 4022158 fliX Rhodopseudomonas palustris BisB5 flagellar assembly regulator FliX YP_568815.1 1894890 D 316057 CDS YP_568816.1 91976157 4022159 1895455..1895871 1 NC_007958.1 transcriptional regulators, TraR/DksA family 1895871 4022159 RPD_1679 Rhodopseudomonas palustris BisB5 transcriptional regulators, TraR/DksA family YP_568816.1 1895455 D 316057 CDS YP_568817.1 91976158 4022160 complement(1895991..1896257) 1 NC_007958.1 hypothetical protein 1896257 4022160 RPD_1680 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568817.1 1895991 R 316057 CDS YP_568818.1 91976159 4022161 complement(1896545..1897303) 1 NC_007958.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 1897303 flgH 4022161 flgH Rhodopseudomonas palustris BisB5 flagellar basal body L-ring protein YP_568818.1 1896545 R 316057 CDS YP_568819.1 91976160 4022162 complement(1897309..1898409) 1 NC_007958.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 1898409 flgA 4022162 flgA Rhodopseudomonas palustris BisB5 flagellar basal body P-ring biosynthesis protein FlgA YP_568819.1 1897309 R 316057 CDS YP_568820.1 91976161 4022163 complement(1898423..1899211) 1 NC_007958.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 1899211 flgG 4022163 flgG Rhodopseudomonas palustris BisB5 flagellar basal body rod protein FlgG YP_568820.1 1898423 R 316057 CDS YP_568821.1 91976162 4022164 complement(1899223..1899984) 1 NC_007958.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgF 1899984 flgF 4022164 flgF Rhodopseudomonas palustris BisB5 flagellar basal body rod protein FlgF YP_568821.1 1899223 R 316057 CDS YP_568822.1 91976163 4022165 1900346..1900849 1 NC_007958.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1900849 fliL 4022165 fliL Rhodopseudomonas palustris BisB5 flagellar basal body-associated protein FliL YP_568822.1 1900346 D 316057 CDS YP_568823.1 91976164 4022166 1900856..1902058 1 NC_007958.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar motor switch protein FliM 1902058 fliM 4022166 fliM Rhodopseudomonas palustris BisB5 flagellar motor switch protein FliM YP_568823.1 1900856 D 316057 CDS YP_568824.1 91976165 4022167 1902055..1902489 1 NC_007958.1 hypothetical protein 1902489 4022167 RPD_1687 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568824.1 1902055 D 316057 CDS YP_568825.1 91976166 4022168 1902486..1903253 1 NC_007958.1 hypothetical protein 1903253 4022168 RPD_1688 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568825.1 1902486 D 316057 CDS YP_568826.1 91976167 4022169 complement(1903346..1903675) 1 NC_007958.1 hypothetical protein 1903675 4022169 RPD_1689 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568826.1 1903346 R 316057 CDS YP_568827.1 91976168 4022170 1903925..1907767 1 NC_007958.1 hypothetical protein 1907767 4022170 RPD_1690 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568827.1 1903925 D 316057 CDS YP_568828.1 91976169 4022171 complement(1907818..1908585) 1 NC_007958.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1908585 fliP 4022171 fliP Rhodopseudomonas palustris BisB5 flagellar biosynthesis protein FliP YP_568828.1 1907818 R 316057 CDS YP_568829.1 91976170 4022172 complement(1908582..1909625) 1 NC_007958.1 hypothetical protein 1909625 4022172 RPD_1692 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568829.1 1908582 R 316057 CDS YP_568830.1 91976171 4022173 1909962..1910372 1 NC_007958.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgB 1910372 flgB 4022173 flgB Rhodopseudomonas palustris BisB5 flagellar basal body rod protein FlgB YP_568830.1 1909962 D 316057 CDS YP_568831.1 91976172 4022174 1910398..1910823 1 NC_007958.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1910823 flgC 4022174 flgC Rhodopseudomonas palustris BisB5 flagellar basal body rod protein FlgC YP_568831.1 1910398 D 316057 CDS YP_568832.1 91976173 4022175 1910849..1911154 1 NC_007958.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagella; flagellar hook-basal body protein FliE 1911154 fliE 4022175 fliE Rhodopseudomonas palustris BisB5 flagellar hook-basal body protein FliE YP_568832.1 1910849 D 316057 CDS YP_568833.1 91976174 4022176 1911295..1911558 1 NC_007958.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 1911558 fliQ 4022176 fliQ Rhodopseudomonas palustris BisB5 flagellar biosynthesis protein FliQ YP_568833.1 1911295 D 316057 CDS YP_568834.1 91976175 4022177 1911668..1912435 1 NC_007958.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1912435 fliR 4022177 fliR Rhodopseudomonas palustris BisB5 flagellar biosynthesis protein FliR YP_568834.1 1911668 D 316057 CDS YP_568835.1 91976176 4022178 1912462..1913535 1 NC_007958.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1913535 flhB 4022178 flhB Rhodopseudomonas palustris BisB5 flagellar biosynthesis protein FlhB YP_568835.1 1912462 D 316057 CDS YP_568836.1 91976177 4022179 complement(1913590..1914234) 1 NC_007958.1 hypothetical protein 1914234 4022179 RPD_1699 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568836.1 1913590 R 316057 CDS YP_568837.1 91976178 4022180 1914476..1917028 1 NC_007958.1 multi-sensor hybrid histidine kinase 1917028 4022180 RPD_1700 Rhodopseudomonas palustris BisB5 multi-sensor hybrid histidine kinase YP_568837.1 1914476 D 316057 CDS YP_568838.1 91976179 4022181 1917189..1918184 1 NC_007958.1 import inner membrane translocase subunit Tim44 1918184 4022181 RPD_1701 Rhodopseudomonas palustris BisB5 import inner membrane translocase subunit Tim44 YP_568838.1 1917189 D 316057 CDS YP_568839.1 91976180 4022182 1918353..1919039 1 NC_007958.1 hypothetical protein 1919039 4022182 RPD_1702 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568839.1 1918353 D 316057 CDS YP_568840.1 91976181 4022183 1919106..1919816 1 NC_007958.1 glutathione S-transferase-like protein 1919816 4022183 RPD_1703 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_568840.1 1919106 D 316057 CDS YP_568841.1 91976182 4022184 complement(1919832..1920191) 1 NC_007958.1 glutathione-dependent formaldehyde-activating protein 1920191 4022184 RPD_1704 Rhodopseudomonas palustris BisB5 glutathione-dependent formaldehyde-activating protein YP_568841.1 1919832 R 316057 CDS YP_568842.1 91976183 4022185 complement(1920728..1921216) 1 NC_007958.1 hypothetical protein 1921216 4022185 RPD_1705 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568842.1 1920728 R 316057 CDS YP_568843.1 91976184 4022186 1921431..1921664 1 NC_007958.1 hypothetical protein 1921664 4022186 RPD_1706 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568843.1 1921431 D 316057 CDS YP_568844.1 91976185 4022187 complement(1921610..1921981) 1 NC_007958.1 hypothetical protein 1921981 4022187 RPD_1707 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568844.1 1921610 R 316057 CDS YP_568845.1 91976186 4022188 1922059..1923714 1 NC_007958.1 tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit 1923714 4022188 RPD_1708 Rhodopseudomonas palustris BisB5 tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit YP_568845.1 1922059 D 316057 CDS YP_568846.1 91976187 4022189 1923877..1924560 1 NC_007958.1 hypothetical protein 1924560 4022189 RPD_1709 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568846.1 1923877 D 316057 CDS YP_568847.1 91976188 4022190 complement(1924573..1925580) 1 NC_007958.1 hypothetical protein 1925580 4022190 RPD_1710 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568847.1 1924573 R 316057 CDS YP_568848.1 91976189 4022191 complement(1925990..1926286) 1 NC_007958.1 hypothetical protein 1926286 4022191 RPD_1711 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568848.1 1925990 R 316057 CDS YP_568849.1 91976190 4022192 1926538..1927245 1 NC_007958.1 hypothetical protein 1927245 4022192 RPD_1712 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568849.1 1926538 D 316057 CDS YP_568850.1 91976191 4022193 complement(1927267..1927839) 1 NC_007958.1 hypothetical protein 1927839 4022193 RPD_1713 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568850.1 1927267 R 316057 CDS YP_568851.1 91976192 4022194 1928169..1929071 1 NC_007958.1 nuclear protein SET 1929071 4022194 RPD_1714 Rhodopseudomonas palustris BisB5 nuclear protein SET YP_568851.1 1928169 D 316057 CDS YP_568852.1 91976193 4022195 complement(1929078..1929476) 1 NC_007958.1 hypothetical protein 1929476 4022195 RPD_1715 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568852.1 1929078 R 316057 CDS YP_568853.1 91976194 4022196 1929590..1930411 1 NC_007958.1 transcriptional regulator 1930411 4022196 RPD_1716 Rhodopseudomonas palustris BisB5 transcriptional regulator YP_568853.1 1929590 D 316057 CDS YP_568854.1 91976195 4022197 1930484..1931149 1 NC_007958.1 DSBA oxidoreductase 1931149 4022197 RPD_1717 Rhodopseudomonas palustris BisB5 DSBA oxidoreductase YP_568854.1 1930484 D 316057 CDS YP_568855.1 91976196 4022198 complement(1931214..1932380) 1 NC_007958.1 hypothetical protein 1932380 4022198 RPD_1718 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568855.1 1931214 R 316057 CDS YP_568856.1 91976197 4022199 1932558..1934105 1 NC_007958.1 peptidase C14, caspase catalytic subunit p20 1934105 4022199 RPD_1719 Rhodopseudomonas palustris BisB5 peptidase C14, caspase catalytic subunit p20 YP_568856.1 1932558 D 316057 CDS YP_568857.1 91976198 4022200 complement(1934152..1934391) 1 NC_007958.1 type IV pilus assembly PilZ 1934391 4022200 RPD_1720 Rhodopseudomonas palustris BisB5 type IV pilus assembly PilZ YP_568857.1 1934152 R 316057 CDS YP_568858.1 91976199 4022201 complement(1934541..1935005) 1 NC_007958.1 thioesterase superfamily protein 1935005 4022201 RPD_1721 Rhodopseudomonas palustris BisB5 thioesterase superfamily protein YP_568858.1 1934541 R 316057 CDS YP_568859.1 91976200 4022202 1935313..1935600 1 NC_007958.1 hypothetical protein 1935600 4022202 RPD_1722 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568859.1 1935313 D 316057 CDS YP_568860.1 91976201 4022203 1935866..1936552 1 NC_007958.1 cyclic nucleotide-binding protein 1936552 4022203 RPD_1723 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_568860.1 1935866 D 316057 CDS YP_568861.1 91976202 4022204 complement(1936772..1936942) 1 NC_007958.1 hypothetical protein 1936942 4022204 RPD_1724 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568861.1 1936772 R 316057 CDS YP_568862.1 91976203 4022205 complement(1937172..1937531) 1 NC_007958.1 hypothetical protein 1937531 4022205 RPD_1725 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568862.1 1937172 R 316057 CDS YP_568863.1 91976204 4022206 complement(1938124..1938264) 1 NC_007958.1 hypothetical protein 1938264 4022206 RPD_1726 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568863.1 1938124 R 316057 CDS YP_568864.1 91976205 4022207 complement(1938459..1938857) 1 NC_007958.1 response regulator receiver 1938857 4022207 RPD_1727 Rhodopseudomonas palustris BisB5 response regulator receiver YP_568864.1 1938459 R 316057 CDS YP_568865.1 91976206 4022208 1939032..1939214 1 NC_007958.1 hypothetical protein 1939214 4022208 RPD_1728 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568865.1 1939032 D 316057 CDS YP_568866.1 91976207 4022209 complement(1939301..1939561) 1 NC_007958.1 hypothetical protein 1939561 4022209 RPD_1729 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568866.1 1939301 R 316057 CDS YP_568867.1 91976208 4022210 1940264..1941355 1 NC_007958.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1941355 recA 4022210 recA Rhodopseudomonas palustris BisB5 recombinase A YP_568867.1 1940264 D 316057 CDS YP_568868.1 91976209 4022211 complement(1941809..1944703) 1 NC_007958.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 1944703 4022211 RPD_1731 Rhodopseudomonas palustris BisB5 glycine dehydrogenase YP_568868.1 1941809 R 316057 CDS YP_568869.1 91976210 4022212 complement(1944873..1945238) 1 NC_007958.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1945238 4022212 RPD_1732 Rhodopseudomonas palustris BisB5 glycine cleavage system protein H YP_568869.1 1944873 R 316057 CDS YP_568870.1 91976211 4022213 complement(1945247..1946395) 1 NC_007958.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1946395 gcvT 4022213 gcvT Rhodopseudomonas palustris BisB5 glycine cleavage system aminomethyltransferase T YP_568870.1 1945247 R 316057 CDS YP_568871.1 91976212 4022216 1946851..1949526 1 NC_007958.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1949526 alaS 4022216 alaS Rhodopseudomonas palustris BisB5 alanyl-tRNA synthetase YP_568871.1 1946851 D 316057 CDS YP_568872.1 91976213 4022217 complement(1949949..1951730) 1 NC_007958.1 sodium/hydrogen exchanger 1951730 4022217 RPD_1735 Rhodopseudomonas palustris BisB5 sodium/hydrogen exchanger YP_568872.1 1949949 R 316057 CDS YP_568873.1 91976214 4022218 1951924..1953594 1 NC_007958.1 potassium efflux system protein 1953594 4022218 RPD_1736 Rhodopseudomonas palustris BisB5 potassium efflux system protein YP_568873.1 1951924 D 316057 CDS YP_568874.1 91976215 4022219 complement(1953739..1954962) 1 NC_007958.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1954962 4022219 RPD_1737 Rhodopseudomonas palustris BisB5 isocitrate dehydrogenase YP_568874.1 1953739 R 316057 CDS YP_568875.1 91976216 4022220 1955383..1956576 1 NC_007958.1 RNA methyltransferase TrmH, group 1 1956576 4022220 RPD_1738 Rhodopseudomonas palustris BisB5 RNA methyltransferase TrmH, group 1 YP_568875.1 1955383 D 316057 CDS YP_568876.1 91976217 4022221 complement(1956658..1958337) 1 NC_007958.1 chemotaxis sensory transducer 1958337 4022221 RPD_1739 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_568876.1 1956658 R 316057 CDS YP_568877.1 91976218 4022222 1958655..1959071 1 NC_007958.1 hypothetical protein 1959071 4022222 RPD_1740 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568877.1 1958655 D 316057 CDS YP_568878.1 91976219 4022223 1959335..1959817 1 NC_007958.1 activates RNA polymerase to cleave back-tracked RNA during elongational pausing; transcription elongation factor regulatory protein 1959817 4022223 RPD_1741 Rhodopseudomonas palustris BisB5 transcription elongation factor regulatory protein YP_568878.1 1959335 D 316057 CDS YP_568879.1 91976220 4022224 complement(1960038..1960793) 1 NC_007958.1 cyclic nucleotide-binding protein 1960793 4022224 RPD_1742 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_568879.1 1960038 R 316057 CDS YP_568880.1 91976221 4022225 1961123..1961395 1 NC_007958.1 hypothetical protein 1961395 4022225 RPD_1743 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568880.1 1961123 D 316057 CDS YP_568881.1 91976222 4022226 1961596..1961970 1 NC_007958.1 hypothetical protein 1961970 4022226 RPD_1744 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568881.1 1961596 D 316057 CDS YP_568882.1 91976223 4022227 1962067..1962897 1 NC_007958.1 hypothetical protein 1962897 4022227 RPD_1745 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568882.1 1962067 D 316057 CDS YP_568883.1 91976224 4022228 complement(1962959..1963282) 1 NC_007958.1 hypothetical protein 1963282 4022228 RPD_1746 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568883.1 1962959 R 316057 CDS YP_568884.2 162138290 4022229 1963587..1964354 1 NC_007958.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1964354 4022229 RPD_1747 Rhodopseudomonas palustris BisB5 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_568884.2 1963587 D 316057 CDS YP_568885.1 91976226 4022230 1964519..1964761 1 NC_007958.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 1964761 4022230 RPD_1748 Rhodopseudomonas palustris BisB5 phosphoribosylformylglycinamidine synthase subunit PurS YP_568885.1 1964519 D 316057 CDS YP_568886.1 91976227 4022231 1964764..1965465 1 NC_007958.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1965465 4022231 RPD_1749 Rhodopseudomonas palustris BisB5 phosphoribosylformylglycinamidine synthase I YP_568886.1 1964764 D 316057 CDS YP_568887.1 91976228 4022232 complement(1965581..1966102) 1 NC_007958.1 thioesterase superfamily protein 1966102 4022232 RPD_1750 Rhodopseudomonas palustris BisB5 thioesterase superfamily protein YP_568887.1 1965581 R 316057 CDS YP_568888.1 91976229 4022233 1966240..1967604 1 NC_007958.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 1967604 4022233 RPD_1751 Rhodopseudomonas palustris BisB5 tryptophan synthase subunit beta YP_568888.1 1966240 D 316057 CDS YP_568889.1 91976230 4022234 1967842..1970052 1 NC_007958.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1970052 4022234 RPD_1752 Rhodopseudomonas palustris BisB5 phosphoribosylformylglycinamidine synthase II YP_568889.1 1967842 D 316057 CDS YP_568890.1 91976231 4022235 complement(1970298..1971482) 1 NC_007958.1 acyltransferase 3 1971482 4022235 RPD_1753 Rhodopseudomonas palustris BisB5 acyltransferase 3 YP_568890.1 1970298 R 316057 CDS YP_568891.1 91976232 4022236 complement(1971570..1971932) 1 NC_007958.1 hypothetical protein 1971932 4022236 RPD_1754 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568891.1 1971570 R 316057 CDS YP_568892.1 91976233 4022237 1972124..1972360 1 NC_007958.1 BolA-like protein 1972360 4022237 RPD_1755 Rhodopseudomonas palustris BisB5 BolA-like protein YP_568892.1 1972124 D 316057 CDS YP_568893.1 91976234 4022238 1972381..1973571 1 NC_007958.1 low temperature requirement A 1973571 4022238 RPD_1756 Rhodopseudomonas palustris BisB5 low temperature requirement A YP_568893.1 1972381 D 316057 CDS YP_568894.1 91976235 4022239 1973608..1974366 1 NC_007958.1 hypothetical protein 1974366 4022239 RPD_1757 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568894.1 1973608 D 316057 CDS YP_568895.1 91976236 4022240 complement(1974405..1975376) 1 NC_007958.1 hypothetical protein 1975376 4022240 RPD_1758 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568895.1 1974405 R 316057 CDS YP_568896.1 91976237 4022241 complement(1975422..1976801) 1 NC_007958.1 hypothetical protein 1976801 4022241 RPD_1759 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568896.1 1975422 R 316057 CDS YP_568897.1 91976238 4022242 1976913..1977296 1 NC_007958.1 glutaredoxin-like protein 1977296 4022242 RPD_1760 Rhodopseudomonas palustris BisB5 glutaredoxin-like protein YP_568897.1 1976913 D 316057 CDS YP_568898.1 91976239 4022243 1977536..1977832 1 NC_007958.1 Appr-1-p processing 1977832 4022243 RPD_1761 Rhodopseudomonas palustris BisB5 Appr-1-p processing YP_568898.1 1977536 D 316057 CDS YP_568899.1 91976240 4022244 1977887..1979182 1 NC_007958.1 beta-lactamase 1979182 4022244 RPD_1762 Rhodopseudomonas palustris BisB5 beta-lactamase YP_568899.1 1977887 D 316057 CDS YP_568900.1 91976241 4022245 1979457..1979768 1 NC_007958.1 hypothetical protein 1979768 4022245 RPD_1763 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568900.1 1979457 D 316057 CDS YP_568901.1 91976242 4022246 complement(1979859..1981025) 1 NC_007958.1 threonine aldolase 1981025 4022246 RPD_1764 Rhodopseudomonas palustris BisB5 threonine aldolase YP_568901.1 1979859 R 316057 CDS YP_568902.1 91976243 4022247 complement(1981253..1981870) 1 NC_007958.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1981870 rpsD 4022247 rpsD Rhodopseudomonas palustris BisB5 30S ribosomal protein S4 YP_568902.1 1981253 R 316057 CDS YP_568903.1 91976244 4022248 complement(1982089..1982871) 1 NC_007958.1 hypothetical protein 1982871 4022248 RPD_1766 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568903.1 1982089 R 316057 CDS YP_568904.1 91976245 4022249 complement(1982878..1983261) 1 NC_007958.1 cupin 2 barrel domain-containing protein 1983261 4022249 RPD_1767 Rhodopseudomonas palustris BisB5 cupin 2 barrel domain-containing protein YP_568904.1 1982878 R 316057 CDS YP_568905.1 91976246 4022250 complement(1983316..1984116) 1 NC_007958.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1984116 4022250 RPD_1768 Rhodopseudomonas palustris BisB5 glutamate racemase YP_568905.1 1983316 R 316057 CDS YP_568906.1 91976247 4022251 complement(1984385..1985692) 1 NC_007958.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1985692 4022251 RPD_1769 Rhodopseudomonas palustris BisB5 adenylosuccinate lyase YP_568906.1 1984385 R 316057 CDS YP_568907.1 91976248 4022252 1986230..1986562 1 NC_007958.1 hypothetical protein 1986562 4022252 RPD_1770 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568907.1 1986230 D 316057 CDS YP_568908.1 91976249 4022253 complement(1986513..1987211) 1 NC_007958.1 ribulose-phosphate 3-epimerase 1987211 4022253 RPD_1771 Rhodopseudomonas palustris BisB5 ribulose-phosphate 3-epimerase YP_568908.1 1986513 R 316057 CDS YP_568909.1 91976250 4022254 1987483..1988247 1 NC_007958.1 calcium-binding EF-hand domain-containing protein 1988247 4022254 RPD_1772 Rhodopseudomonas palustris BisB5 calcium-binding EF-hand domain-containing protein YP_568909.1 1987483 D 316057 CDS YP_568910.1 91976251 4022255 complement(1988306..1989301) 1 NC_007958.1 peptidase S58, DmpA 1989301 4022255 RPD_1773 Rhodopseudomonas palustris BisB5 peptidase S58, DmpA YP_568910.1 1988306 R 316057 CDS YP_568911.1 91976252 4022256 1989476..1990210 1 NC_007958.1 cytochrome c biogenesis protein, transmembrane region 1990210 4022256 RPD_1774 Rhodopseudomonas palustris BisB5 cytochrome c biogenesis protein, transmembrane region YP_568911.1 1989476 D 316057 CDS YP_568912.1 91976253 4022257 complement(1990434..1991546) 1 NC_007958.1 extracellular ligand-binding receptor 1991546 4022257 RPD_1775 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_568912.1 1990434 R 316057 CDS YP_568913.1 91976254 4022258 complement(1991710..1992444) 1 NC_007958.1 ABC transporter-like protein 1992444 4022258 RPD_1776 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568913.1 1991710 R 316057 CDS YP_568914.1 91976255 4022259 complement(1992441..1993280) 1 NC_007958.1 ABC transporter-like protein 1993280 4022259 RPD_1777 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568914.1 1992441 R 316057 CDS YP_568915.1 91976256 4022260 complement(1993277..1994611) 1 NC_007958.1 inner-membrane translocator 1994611 4022260 RPD_1778 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568915.1 1993277 R 316057 CDS YP_568916.1 91976257 4022261 complement(1994612..1995529) 1 NC_007958.1 inner-membrane translocator 1995529 4022261 RPD_1779 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568916.1 1994612 R 316057 CDS YP_568917.1 91976258 4022262 1996046..1996573 1 NC_007958.1 hypothetical protein 1996573 4022262 RPD_1780 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568917.1 1996046 D 316057 CDS YP_568918.1 91976259 4022263 1996778..1997239 1 NC_007958.1 carbon monoxide dehydrogenase subunit G 1997239 4022263 RPD_1781 Rhodopseudomonas palustris BisB5 carbon monoxide dehydrogenase subunit G YP_568918.1 1996778 D 316057 CDS YP_568919.1 91976260 4022264 1997401..1997898 1 NC_007958.1 (2Fe-2S)-binding protein 1997898 4022264 RPD_1782 Rhodopseudomonas palustris BisB5 (2Fe-2S)-binding protein YP_568919.1 1997401 D 316057 CDS YP_568920.1 91976261 4022265 1997955..1998761 1 NC_007958.1 molybdopterin dehydrogenase 1998761 4022265 RPD_1783 Rhodopseudomonas palustris BisB5 molybdopterin dehydrogenase YP_568920.1 1997955 D 316057 CDS YP_568921.1 91976262 4022266 1998809..1999717 1 NC_007958.1 ATPase 1999717 4022266 RPD_1784 Rhodopseudomonas palustris BisB5 ATPase YP_568921.1 1998809 D 316057 CDS YP_568922.1 91976263 4022267 1999861..2001105 1 NC_007958.1 VWA containing CoxE-like protein 2001105 4022267 RPD_1785 Rhodopseudomonas palustris BisB5 VWA containing CoxE-like protein YP_568922.1 1999861 D 316057 CDS YP_568923.1 91976264 4022268 2001132..2001455 1 NC_007958.1 hypothetical protein 2001455 4022268 RPD_1786 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568923.1 2001132 D 316057 CDS YP_568924.1 91976265 4022269 2001493..2002194 1 NC_007958.1 xanthine dehydrogenase accessory factor 2002194 4022269 RPD_1787 Rhodopseudomonas palustris BisB5 xanthine dehydrogenase accessory factor YP_568924.1 2001493 D 316057 CDS YP_568925.1 91976266 4022270 2002191..2003792 1 NC_007958.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 2003792 4022270 RPD_1788 Rhodopseudomonas palustris BisB5 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_568925.1 2002191 D 316057 CDS YP_568926.1 91976267 4022271 2003920..2004297 1 NC_007958.1 hypothetical protein 2004297 4022271 RPD_1789 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568926.1 2003920 D 316057 CDS YP_568927.1 91976268 4022272 complement(2004439..2004624) 1 NC_007958.1 hypothetical protein 2004624 4022272 RPD_1790 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568927.1 2004439 R 316057 CDS YP_568928.1 91976269 4022273 2004772..2005512 1 NC_007958.1 regulatory protein TetR 2005512 4022273 RPD_1791 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_568928.1 2004772 D 316057 CDS YP_568929.1 91976270 4022274 2005509..2006309 1 NC_007958.1 putative efflux protein 2006309 4022274 RPD_1792 Rhodopseudomonas palustris BisB5 putative efflux protein YP_568929.1 2005509 D 316057 CDS YP_568930.1 91976271 4022275 2006306..2007247 1 NC_007958.1 ABC transporter-like protein 2007247 4022275 RPD_1793 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568930.1 2006306 D 316057 CDS YP_568931.1 91976272 4022276 2007244..2008416 1 NC_007958.1 hypothetical protein 2008416 4022276 RPD_1794 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568931.1 2007244 D 316057 CDS YP_568932.1 91976273 4022277 2008445..2009767 1 NC_007958.1 adenylyl cyclase class-3/4/guanylyl cyclase 2009767 4022277 RPD_1795 Rhodopseudomonas palustris BisB5 adenylyl cyclase class-3/4/guanylyl cyclase YP_568932.1 2008445 D 316057 CDS YP_568933.1 91976274 4022278 complement(2009824..2010537) 1 NC_007958.1 hypothetical protein 2010537 4022278 RPD_1796 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568933.1 2009824 R 316057 CDS YP_568934.1 91976275 4022279 complement(2011025..2011264) 1 NC_007958.1 hypothetical protein 2011264 4022279 RPD_1797 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568934.1 2011025 R 316057 CDS YP_568935.1 91976276 4022280 complement(2011383..2011844) 1 NC_007958.1 hypothetical protein 2011844 4022280 RPD_1798 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568935.1 2011383 R 316057 CDS YP_568936.1 91976277 4022281 complement(2011873..2012676) 1 NC_007958.1 hypothetical protein 2012676 4022281 RPD_1799 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568936.1 2011873 R 316057 CDS YP_568937.1 91976278 4022282 2013010..2014143 1 NC_007958.1 dolichyl-phosphate beta-D-mannosyltransferase 2014143 4022282 RPD_1800 Rhodopseudomonas palustris BisB5 dolichyl-phosphate beta-D-mannosyltransferase YP_568937.1 2013010 D 316057 CDS YP_568938.1 91976279 4022283 2014151..2015644 1 NC_007958.1 glycosyl transferase family protein 2015644 4022283 RPD_1801 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_568938.1 2014151 D 316057 CDS YP_568939.1 91976280 4022284 2015783..2017000 1 NC_007958.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2017000 4022284 RPD_1802 Rhodopseudomonas palustris BisB5 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_568939.1 2015783 D 316057 CDS YP_568940.1 91976281 4022285 complement(2017019..2018008) 1 NC_007958.1 hypothetical protein 2018008 4022285 RPD_1803 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568940.1 2017019 R 316057 CDS YP_568941.1 91976282 4022286 complement(2018072..2018818) 1 NC_007958.1 hypothetical protein 2018818 4022286 RPD_1804 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568941.1 2018072 R 316057 CDS YP_568942.1 91976283 4022287 complement(2019205..2020161) 1 NC_007958.1 PfkB 2020161 4022287 RPD_1805 Rhodopseudomonas palustris BisB5 PfkB YP_568942.1 2019205 R 316057 CDS YP_568943.1 91976284 4022288 2020517..2021407 1 NC_007958.1 glyoxalase/bleomycin resistance protein/dioxygenase 2021407 4022288 RPD_1806 Rhodopseudomonas palustris BisB5 glyoxalase/bleomycin resistance protein/dioxygenase YP_568943.1 2020517 D 316057 CDS YP_568944.1 91976285 4022289 complement(2021461..2022678) 1 NC_007958.1 cytochrome P450 2022678 4022289 RPD_1807 Rhodopseudomonas palustris BisB5 cytochrome P450 YP_568944.1 2021461 R 316057 CDS YP_568945.1 91976286 4022290 2022945..2023646 1 NC_007958.1 TetR family transcriptional regulator 2023646 4022290 RPD_1808 Rhodopseudomonas palustris BisB5 TetR family transcriptional regulator YP_568945.1 2022945 D 316057 CDS YP_568946.1 91976287 4022291 2023647..2024840 1 NC_007958.1 secretion protein HlyD 2024840 4022291 RPD_1809 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_568946.1 2023647 D 316057 CDS YP_568947.1 91976288 4022292 2024981..2028085 1 NC_007958.1 acriflavin resistance protein 2028085 4022292 RPD_1810 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_568947.1 2024981 D 316057 CDS YP_568948.1 91976289 4022293 complement(2028212..2029186) 1 NC_007958.1 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein 2029186 4022293 RPD_1811 Rhodopseudomonas palustris BisB5 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein YP_568948.1 2028212 R 316057 CDS YP_568949.1 91976290 4022294 complement(2029183..2030169) 1 NC_007958.1 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein 2030169 4022294 RPD_1812 Rhodopseudomonas palustris BisB5 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein YP_568949.1 2029183 R 316057 CDS YP_568950.1 91976291 4022295 complement(2030186..2031145) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 2031145 4022295 RPD_1813 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_568950.1 2030186 R 316057 CDS YP_568951.1 91976292 4022296 complement(2031157..2032137) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 2032137 4022296 RPD_1814 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_568951.1 2031157 R 316057 CDS YP_568952.1 91976293 4022297 complement(2032173..2033771) 1 NC_007958.1 extracellular solute-binding protein 2033771 4022297 RPD_1815 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_568952.1 2032173 R 316057 CDS YP_568953.1 91976294 4022298 2033941..2035194 1 NC_007958.1 D-amino-acid dehydrogenase 2035194 4022298 RPD_1816 Rhodopseudomonas palustris BisB5 D-amino-acid dehydrogenase YP_568953.1 2033941 D 316057 CDS YP_568954.1 91976295 4022299 2035421..2035675 1 NC_007958.1 hypothetical protein 2035675 4022299 RPD_1817 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568954.1 2035421 D 316057 CDS YP_568955.1 91976296 4022300 2035694..2036482 1 NC_007958.1 hypothetical protein 2036482 4022300 RPD_1818 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568955.1 2035694 D 316057 CDS YP_568956.1 91976297 4022301 2036496..2037491 1 NC_007958.1 alpha/beta hydrolase fold protein 2037491 4022301 RPD_1819 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_568956.1 2036496 D 316057 CDS YP_568957.1 91976298 4022302 2037686..2040913 1 NC_007958.1 cytochrome P450 2040913 4022302 RPD_1820 Rhodopseudomonas palustris BisB5 cytochrome P450 YP_568957.1 2037686 D 316057 CDS YP_568958.1 91976299 4022303 2040933..2041271 1 NC_007958.1 hypothetical protein 2041271 4022303 RPD_1821 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568958.1 2040933 D 316057 CDS YP_568959.1 91976300 4022304 2041523..2042002 1 NC_007958.1 phasin 2 2042002 4022304 RPD_1822 Rhodopseudomonas palustris BisB5 phasin 2 YP_568959.1 2041523 D 316057 CDS YP_568960.1 91976301 4022305 complement(2042156..2042824) 1 NC_007958.1 TetR family transcriptional regulator 2042824 4022305 RPD_1823 Rhodopseudomonas palustris BisB5 TetR family transcriptional regulator YP_568960.1 2042156 R 316057 CDS YP_568961.1 91976302 4022306 2042952..2043935 1 NC_007958.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 2043935 paaA 4022306 paaA Rhodopseudomonas palustris BisB5 phenylacetate-CoA oxygenase subunit PaaA YP_568961.1 2042952 D 316057 CDS YP_568962.1 91976303 4022307 2043966..2044253 1 NC_007958.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 2044253 paaB 4022307 paaB Rhodopseudomonas palustris BisB5 phenylacetate-CoA oxygenase subunit PaaB YP_568962.1 2043966 D 316057 CDS YP_568963.1 91976304 4022308 2044367..2045143 1 NC_007958.1 phenylacetate-CoA oxygenase subunit PaaI 2045143 4022308 RPD_1826 Rhodopseudomonas palustris BisB5 phenylacetate-CoA oxygenase subunit PaaI YP_568963.1 2044367 D 316057 CDS YP_568964.1 91976305 4022309 2045140..2045640 1 NC_007958.1 phenylacetate-CoA oxygenase subunit PaaJ 2045640 4022309 RPD_1827 Rhodopseudomonas palustris BisB5 phenylacetate-CoA oxygenase subunit PaaJ YP_568964.1 2045140 D 316057 CDS YP_568965.1 91976306 4022310 2045657..2046745 1 NC_007958.1 phenylacetate-CoA oxygenase/reductase subunit PaaK 2046745 4022310 RPD_1828 Rhodopseudomonas palustris BisB5 phenylacetate-CoA oxygenase/reductase subunit PaaK YP_568965.1 2045657 D 316057 CDS YP_568966.1 91976307 4022311 complement(2047034..2048368) 1 NC_007958.1 phenylacetate-CoA ligase 2048368 4022311 RPD_1829 Rhodopseudomonas palustris BisB5 phenylacetate-CoA ligase YP_568966.1 2047034 R 316057 CDS YP_568967.1 91976308 4022312 complement(2048383..2048835) 1 NC_007958.1 phenylacetic acid degradation protein PaaD 2048835 4022312 RPD_1830 Rhodopseudomonas palustris BisB5 phenylacetic acid degradation protein PaaD YP_568967.1 2048383 R 316057 CDS YP_568968.1 91976309 4022313 complement(2048838..2049623) 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2049623 4022313 RPD_1831 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_568968.1 2048838 R 316057 CDS YP_568969.1 91976310 4022314 2049781..2051817 1 NC_007958.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 2051817 4022314 RPD_1832 Rhodopseudomonas palustris BisB5 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase YP_568969.1 2049781 D 316057 CDS YP_568970.1 91976311 4022315 complement(2051953..2052318) 1 NC_007958.1 hypothetical protein 2052318 4022315 RPD_1833 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568970.1 2051953 R 316057 CDS YP_568971.1 91976312 4022316 complement(2052464..2053429) 1 NC_007958.1 fatty acid desaturase 2053429 4022316 RPD_1834 Rhodopseudomonas palustris BisB5 fatty acid desaturase YP_568971.1 2052464 R 316057 CDS YP_568972.1 91976313 4022317 complement(2053478..2054701) 1 NC_007958.1 OsmC-like protein 2054701 4022317 RPD_1835 Rhodopseudomonas palustris BisB5 OsmC-like protein YP_568972.1 2053478 R 316057 CDS YP_568973.1 91976314 4022318 complement(2054802..2056001) 1 NC_007958.1 cytochrome P450 2056001 4022318 RPD_1836 Rhodopseudomonas palustris BisB5 cytochrome P450 YP_568973.1 2054802 R 316057 CDS YP_568974.1 91976315 4022319 complement(2056097..2056306) 1 NC_007958.1 putative ferredoxin 2056306 4022319 RPD_1837 Rhodopseudomonas palustris BisB5 putative ferredoxin YP_568974.1 2056097 R 316057 CDS YP_568975.1 91976316 4022320 complement(2056439..2057872) 1 NC_007958.1 amidase 2057872 4022320 RPD_1838 Rhodopseudomonas palustris BisB5 amidase YP_568975.1 2056439 R 316057 CDS YP_568976.1 91976317 4022321 2058007..2059119 1 NC_007958.1 ABC transporter-like protein 2059119 4022321 RPD_1839 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568976.1 2058007 D 316057 CDS YP_568977.1 91976318 4022322 complement(2059175..2060551) 1 NC_007958.1 Beta-glucosidase 2060551 4022322 RPD_1840 Rhodopseudomonas palustris BisB5 Beta-glucosidase YP_568977.1 2059175 R 316057 CDS YP_568978.1 91976319 4022323 2060790..2061917 1 NC_007958.1 tartrate dehydrogenase 2061917 4022323 RPD_1841 Rhodopseudomonas palustris BisB5 tartrate dehydrogenase YP_568978.1 2060790 D 316057 CDS YP_568979.1 91976320 4022324 complement(2061986..2062855) 1 NC_007958.1 hypothetical protein 2062855 4022324 RPD_1842 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568979.1 2061986 R 316057 CDS YP_568980.1 91976321 4022325 complement(2062989..2063903) 1 NC_007958.1 D-isomer specific 2-hydroxyacid dehydrogenase 2063903 4022325 RPD_1843 Rhodopseudomonas palustris BisB5 D-isomer specific 2-hydroxyacid dehydrogenase YP_568980.1 2062989 R 316057 CDS YP_568981.1 91976322 4022326 complement(2063932..2065179) 1 NC_007958.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2065179 4022326 RPD_1844 Rhodopseudomonas palustris BisB5 allantoate amidohydrolase YP_568981.1 2063932 R 316057 CDS YP_568982.1 91976323 4022327 complement(2065249..2066196) 1 NC_007958.1 LysR family transcriptional regulator 2066196 4022327 RPD_1845 Rhodopseudomonas palustris BisB5 LysR family transcriptional regulator YP_568982.1 2065249 R 316057 CDS YP_568983.1 91976324 4022328 2066314..2067132 1 NC_007958.1 hypothetical protein 2067132 4022328 RPD_1846 Rhodopseudomonas palustris BisB5 hypothetical protein YP_568983.1 2066314 D 316057 CDS YP_568984.1 91976325 4022329 2067189..2068439 1 NC_007958.1 twin-arginine translocation pathway signal 2068439 4022329 RPD_1847 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_568984.1 2067189 D 316057 CDS YP_568985.1 91976326 4022330 2068571..2069449 1 NC_007958.1 inner-membrane translocator 2069449 4022330 RPD_1848 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568985.1 2068571 D 316057 CDS YP_568986.1 91976327 4022331 2069449..2070435 1 NC_007958.1 inner-membrane translocator 2070435 4022331 RPD_1849 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_568986.1 2069449 D 316057 CDS YP_568987.1 91976328 4022332 2070432..2071166 1 NC_007958.1 ABC transporter-like protein 2071166 4022332 RPD_1850 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568987.1 2070432 D 316057 CDS YP_568988.1 91976329 4022333 2071150..2071854 1 NC_007958.1 ABC transporter-like protein 2071854 4022333 RPD_1851 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_568988.1 2071150 D 316057 CDS YP_568989.1 91976330 4022335 complement(2072295..2072957) 1 NC_007958.1 putative aldolase 2072957 4022335 RPD_1853 Rhodopseudomonas palustris BisB5 putative aldolase YP_568989.1 2072295 R 316057 CDS YP_568990.1 91976331 4022336 2073048..2073962 1 NC_007958.1 3-hydroxyisobutyrate dehydrogenase 2073962 4022336 RPD_1854 Rhodopseudomonas palustris BisB5 3-hydroxyisobutyrate dehydrogenase YP_568990.1 2073048 D 316057 CDS YP_568991.1 91976332 4022337 2073983..2074765 1 NC_007958.1 hydroxypyruvate isomerase 2074765 4022337 RPD_1855 Rhodopseudomonas palustris BisB5 hydroxypyruvate isomerase YP_568991.1 2073983 D 316057 CDS YP_568992.1 91976333 4022338 2074762..2076039 1 NC_007958.1 Hrp-dependent type III effector protein 2076039 4022338 RPD_1856 Rhodopseudomonas palustris BisB5 Hrp-dependent type III effector protein YP_568992.1 2074762 D 316057 CDS YP_568993.1 91976334 4022339 2076248..2077939 1 NC_007958.1 chemotaxis sensory transducer 2077939 4022339 RPD_1857 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_568993.1 2076248 D 316057 CDS YP_568994.1 91976335 4022340 complement(2078123..2079634) 1 NC_007958.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2079634 4022340 RPD_1858 Rhodopseudomonas palustris BisB5 acetyl-CoA acetyltransferase YP_568994.1 2078123 R 316057 CDS YP_568995.1 91976336 4022341 complement(2079765..2080898) 1 NC_007958.1 2-nitropropane dioxygenase 2080898 4022341 RPD_1859 Rhodopseudomonas palustris BisB5 2-nitropropane dioxygenase YP_568995.1 2079765 R 316057 CDS YP_568996.1 91976337 4022342 2081149..2082813 1 NC_007958.1 FAD dependent oxidoreductase 2082813 4022342 RPD_1860 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_568996.1 2081149 D 316057 CDS YP_568997.1 91976338 4022343 complement(2082943..2083764) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 2083764 4022343 RPD_1861 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_568997.1 2082943 R 316057 CDS YP_568998.1 91976339 4022344 2083888..2084688 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2084688 4022344 RPD_1862 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_568998.1 2083888 D 316057 CDS YP_568999.1 91976340 4022345 2084695..2085684 1 NC_007958.1 aminoglycoside phosphotransferase 2085684 4022345 RPD_1863 Rhodopseudomonas palustris BisB5 aminoglycoside phosphotransferase YP_568999.1 2084695 D 316057 CDS YP_569000.1 91976341 4022346 2085755..2086129 1 NC_007958.1 hypothetical protein 2086129 4022346 RPD_1864 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569000.1 2085755 D 316057 CDS YP_569001.1 91976342 4022347 complement(2086258..2087037) 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2087037 4022347 RPD_1865 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_569001.1 2086258 R 316057 CDS YP_569002.1 91976343 4022348 2087092..2088438 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 2088438 4022348 RPD_1866 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_569002.1 2087092 D 316057 CDS YP_569003.1 91976344 4022349 complement(2088617..2090761) 1 NC_007958.1 chemotaxis sensory transducer 2090761 4022349 RPD_1867 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_569003.1 2088617 R 316057 CDS YP_569004.1 91976345 4022350 complement(2091167..2092744) 1 NC_007958.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2092744 4022350 RPD_1868 Rhodopseudomonas palustris BisB5 long-chain-fatty-acid--CoA ligase YP_569004.1 2091167 R 316057 CDS YP_569005.1 91976346 4022351 complement(2092970..2093842) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 2093842 4022351 RPD_1869 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_569005.1 2092970 R 316057 CDS YP_569006.1 91976347 4022352 2093958..2094770 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2094770 4022352 RPD_1870 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_569006.1 2093958 D 316057 CDS YP_569007.1 91976348 4022353 2094920..2096494 1 NC_007958.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2096494 4022353 RPD_1871 Rhodopseudomonas palustris BisB5 long-chain-fatty-acid--CoA ligase YP_569007.1 2094920 D 316057 CDS YP_569008.1 91976349 4022354 complement(2096442..2099252) 1 NC_007958.1 sensor histidine kinase 2099252 4022354 RPD_1872 Rhodopseudomonas palustris BisB5 sensor histidine kinase YP_569008.1 2096442 R 316057 CDS YP_569009.1 91976350 4022355 complement(2099395..2100276) 1 NC_007958.1 LysR family transcriptional regulator 2100276 4022355 RPD_1873 Rhodopseudomonas palustris BisB5 LysR family transcriptional regulator YP_569009.1 2099395 R 316057 CDS YP_569010.1 91976351 4022356 complement(2100273..2101331) 1 NC_007958.1 hypothetical protein 2101331 4022356 RPD_1874 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569010.1 2100273 R 316057 CDS YP_569011.1 91976352 4022357 2101568..2102428 1 NC_007958.1 hypothetical protein 2102428 4022357 RPD_1875 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569011.1 2101568 D 316057 CDS YP_569012.1 91976353 4022358 2102526..2105327 1 NC_007958.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 2105327 4022358 RPD_1876 Rhodopseudomonas palustris BisB5 phosphoenolpyruvate carboxylase YP_569012.1 2102526 D 316057 CDS YP_569013.1 91976354 4022359 2105639..2106943 1 NC_007958.1 OmpA/MotB 2106943 4022359 RPD_1877 Rhodopseudomonas palustris BisB5 OmpA/MotB YP_569013.1 2105639 D 316057 CDS YP_569014.1 91976355 4022360 complement(2107099..2108013) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 2108013 4022360 RPD_1878 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_569014.1 2107099 R 316057 CDS YP_569015.1 91976356 4022361 complement(2108147..2109286) 1 NC_007958.1 putative lipid transfer protein 2109286 4022361 RPD_1879 Rhodopseudomonas palustris BisB5 putative lipid transfer protein YP_569015.1 2108147 R 316057 CDS YP_569016.1 91976357 4022362 complement(2109292..2109705) 1 NC_007958.1 hypothetical protein 2109705 4022362 RPD_1880 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569016.1 2109292 R 316057 CDS YP_569017.1 91976358 4022363 2110090..2111481 1 NC_007958.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 2111481 4022363 RPD_1881 Rhodopseudomonas palustris BisB5 amidase YP_569017.1 2110090 D 316057 CDS YP_569018.1 91976359 4022364 2111474..2112160 1 NC_007958.1 hypothetical protein 2112160 4022364 RPD_1882 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569018.1 2111474 D 316057 CDS YP_569019.1 91976360 4022365 complement(2112250..2112726) 1 NC_007958.1 phenylacetic acid degradation-like protein 2112726 4022365 RPD_1883 Rhodopseudomonas palustris BisB5 phenylacetic acid degradation-like protein YP_569019.1 2112250 R 316057 CDS YP_569020.1 91976361 4022366 complement(2112887..2114059) 1 NC_007958.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 2114059 4022366 RPD_1884 Rhodopseudomonas palustris BisB5 4-hydroxybenzoate 3-monooxygenase YP_569020.1 2112887 R 316057 CDS YP_569021.1 91976362 4022367 2114250..2115275 1 NC_007958.1 TRAP dicarboxylate transporter subunit DctP 2115275 4022367 RPD_1885 Rhodopseudomonas palustris BisB5 TRAP dicarboxylate transporter subunit DctP YP_569021.1 2114250 D 316057 CDS YP_569022.1 91976363 4022368 2115856..2116662 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2116662 4022368 RPD_1886 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_569022.1 2115856 D 316057 CDS YP_569023.1 91976364 4022369 2116664..2118571 1 NC_007958.1 catalyzes the conversion of ferulic acid to feruloyl-CoA; feruloyl-CoA synthase 2118571 4022369 RPD_1887 Rhodopseudomonas palustris BisB5 feruloyl-CoA synthase YP_569023.1 2116664 D 316057 CDS YP_569024.1 91976365 4022370 2118722..2119141 1 NC_007958.1 thioesterase superfamily protein 2119141 4022370 RPD_1888 Rhodopseudomonas palustris BisB5 thioesterase superfamily protein YP_569024.1 2118722 D 316057 CDS YP_569025.1 91976366 4022371 2119225..2120382 1 NC_007958.1 extracellular ligand-binding receptor 2120382 4022371 RPD_1889 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_569025.1 2119225 D 316057 CDS YP_569026.1 91976367 4022372 complement(2120482..2121201) 1 NC_007958.1 ABC transporter-like protein 2121201 4022372 RPD_1890 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569026.1 2120482 R 316057 CDS YP_569027.1 91976368 4022373 complement(2121198..2122967) 1 NC_007958.1 ABC transporter-like protein 2122967 4022373 RPD_1891 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569027.1 2121198 R 316057 CDS YP_569028.1 91976369 4022374 complement(2122973..2124013) 1 NC_007958.1 inner-membrane translocator 2124013 4022374 RPD_1892 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_569028.1 2122973 R 316057 CDS YP_569029.1 91976370 4022375 2124184..2124702 1 NC_007958.1 regulatory protein MarR 2124702 4022375 RPD_1893 Rhodopseudomonas palustris BisB5 regulatory protein MarR YP_569029.1 2124184 D 316057 CDS YP_569030.1 91976371 4022376 2124876..2127281 1 NC_007958.1 GGDEF domain-containing protein 2127281 4022376 RPD_1894 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_569030.1 2124876 D 316057 CDS YP_569031.1 91976372 4022377 complement(2127302..2129026) 1 NC_007958.1 sodium/hydrogen exchanger 2129026 4022377 RPD_1895 Rhodopseudomonas palustris BisB5 sodium/hydrogen exchanger YP_569031.1 2127302 R 316057 CDS YP_569032.1 91976373 4022378 2129075..2129659 1 NC_007958.1 hypothetical protein 2129659 4022378 RPD_1896 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569032.1 2129075 D 316057 CDS YP_569033.1 91976374 4022379 complement(2129817..2131133) 1 NC_007958.1 hydroxypyruvate reductase 2131133 4022379 RPD_1897 Rhodopseudomonas palustris BisB5 hydroxypyruvate reductase YP_569033.1 2129817 R 316057 CDS YP_569034.1 91976375 4022380 complement(2131309..2132544) 1 NC_007958.1 extracellular ligand-binding receptor 2132544 4022380 RPD_1898 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_569034.1 2131309 R 316057 CDS YP_569035.1 91976376 4022381 complement(2132717..2134159) 1 NC_007958.1 phage SPO1 DNA polymerase-like protein 2134159 4022381 RPD_1899 Rhodopseudomonas palustris BisB5 phage SPO1 DNA polymerase-like protein YP_569035.1 2132717 R 316057 CDS YP_569036.1 91976377 4022382 complement(2134256..2135494) 1 NC_007958.1 radical SAM family protein 2135494 4022382 RPD_1900 Rhodopseudomonas palustris BisB5 radical SAM family protein YP_569036.1 2134256 R 316057 CDS YP_569037.1 91976378 4022383 2135662..2136450 1 NC_007958.1 hypothetical protein 2136450 4022383 RPD_1901 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569037.1 2135662 D 316057 CDS YP_569038.1 91976379 4022384 2136500..2137936 1 NC_007958.1 hypothetical protein 2137936 4022384 RPD_1902 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569038.1 2136500 D 316057 CDS YP_569039.1 91976380 4022385 2137950..2141282 1 NC_007958.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 2141282 dnaE2 4022385 dnaE2 Rhodopseudomonas palustris BisB5 error-prone DNA polymerase YP_569039.1 2137950 D 316057 CDS YP_569040.1 91976381 4022386 2141372..2142868 1 NC_007958.1 L-carnitine dehydratase/bile acid-inducible protein F 2142868 4022386 RPD_1904 Rhodopseudomonas palustris BisB5 L-carnitine dehydratase/bile acid-inducible protein F YP_569040.1 2141372 D 316057 CDS YP_569041.1 91976382 4022387 2143493..2143633 1 NC_007958.1 hypothetical protein 2143633 4022387 RPD_1905 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569041.1 2143493 D 316057 CDS YP_569042.1 91976383 4022388 2143823..2144143 1 NC_007958.1 hypothetical protein 2144143 4022388 RPD_1906 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569042.1 2143823 D 316057 CDS YP_569043.1 91976384 4022389 complement(2144351..2145769) 1 NC_007958.1 Type I secretion outer membrane protein, TolC 2145769 4022389 RPD_1907 Rhodopseudomonas palustris BisB5 Type I secretion outer membrane protein, TolC YP_569043.1 2144351 R 316057 CDS YP_569044.1 91976385 4022390 complement(2145972..2146751) 1 NC_007958.1 enoyl-CoA hydratase/isomerase 2146751 4022390 RPD_1908 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_569044.1 2145972 R 316057 CDS YP_569045.1 91976386 4022391 complement(2146839..2147534) 1 NC_007958.1 hypothetical protein 2147534 4022391 RPD_1909 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569045.1 2146839 R 316057 CDS YP_569046.1 91976387 4022392 2147776..2148351 1 NC_007958.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2148351 4022392 RPD_1910 Rhodopseudomonas palustris BisB5 RNA polymerase sigma factor YP_569046.1 2147776 D 316057 CDS YP_569047.1 91976388 4022393 2148354..2148992 1 NC_007958.1 hypothetical protein 2148992 4022393 RPD_1911 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569047.1 2148354 D 316057 CDS YP_569048.1 91976389 4022394 2149167..2149337 1 NC_007958.1 hypothetical protein 2149337 4022394 RPD_1912 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569048.1 2149167 D 316057 CDS YP_569049.1 91976390 4022395 complement(2149390..2150505) 1 NC_007958.1 hypothetical protein 2150505 4022395 RPD_1913 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569049.1 2149390 R 316057 CDS YP_569050.1 91976391 4022396 complement(2150543..2151688) 1 NC_007958.1 GGDEF domain-containing protein 2151688 4022396 RPD_1914 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_569050.1 2150543 R 316057 CDS YP_569051.1 91976392 4022397 2152101..2152670 1 NC_007958.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2152670 4022397 RPD_1915 Rhodopseudomonas palustris BisB5 RNA polymerase sigma factor YP_569051.1 2152101 D 316057 CDS YP_569052.1 91976393 4022398 2152667..2153491 1 NC_007958.1 hypothetical protein 2153491 4022398 RPD_1916 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569052.1 2152667 D 316057 CDS YP_569053.1 91976394 4022399 2154062..2154604 1 NC_007958.1 hypothetical protein 2154604 4022399 RPD_1917 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569053.1 2154062 D 316057 CDS YP_569054.1 91976395 4022400 2155174..2157240 1 NC_007958.1 chemotaxis sensory transducer 2157240 4022400 RPD_1918 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_569054.1 2155174 D 316057 CDS YP_569055.1 91976396 4022401 complement(2157348..2157983) 1 NC_007958.1 chemotaxis sensory transducer 2157983 4022401 RPD_1919 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_569055.1 2157348 R 316057 CDS YP_569056.1 91976397 4022402 complement(2158295..2159647) 1 NC_007958.1 twin-arginine translocation pathway signal 2159647 4022402 RPD_1920 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_569056.1 2158295 R 316057 CDS YP_569057.1 91976398 4022403 complement(2159763..2160410) 1 NC_007958.1 peptidase C15, pyroglutamyl peptidase I 2160410 4022403 RPD_1921 Rhodopseudomonas palustris BisB5 peptidase C15, pyroglutamyl peptidase I YP_569057.1 2159763 R 316057 CDS YP_569058.1 91976399 4022404 complement(2160407..2161399) 1 NC_007958.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 2161399 4022404 RPD_1922 Rhodopseudomonas palustris BisB5 arginine/ornithine transport system ATPase YP_569058.1 2160407 R 316057 CDS YP_569059.1 91976400 4022405 2161580..2162059 1 NC_007958.1 hypothetical protein 2162059 4022405 RPD_1923 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569059.1 2161580 D 316057 CDS YP_569060.1 91976401 4022406 complement(2162066..2162857) 1 NC_007958.1 hypothetical protein 2162857 4022406 RPD_1924 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569060.1 2162066 R 316057 CDS YP_569061.1 91976402 4022407 complement(2162854..2163198) 1 NC_007958.1 hypothetical protein 2163198 4022407 RPD_1925 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569061.1 2162854 R 316057 CDS YP_569062.1 91976403 4022408 complement(2163200..2163514) 1 NC_007958.1 DNA polymerase, beta-like region 2163514 4022408 RPD_1926 Rhodopseudomonas palustris BisB5 DNA polymerase, beta-like region YP_569062.1 2163200 R 316057 CDS YP_569063.1 91976404 4022409 complement(2163550..2165709) 1 NC_007958.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 2165709 4022409 RPD_1927 Rhodopseudomonas palustris BisB5 methylmalonyl-CoA mutase YP_569063.1 2163550 R 316057 CDS YP_569064.1 91976405 4022410 complement(2165945..2166409) 1 NC_007958.1 glutathione-dependent formaldehyde-activating protein 2166409 4022410 RPD_1928 Rhodopseudomonas palustris BisB5 glutathione-dependent formaldehyde-activating protein YP_569064.1 2165945 R 316057 CDS YP_569065.1 91976406 4022411 complement(2166406..2168277) 1 NC_007958.1 methylmalonyl-CoA mutase 2168277 4022411 RPD_1929 Rhodopseudomonas palustris BisB5 methylmalonyl-CoA mutase YP_569065.1 2166406 R 316057 CDS YP_569066.1 91976407 4022412 complement(2168401..2168892) 1 NC_007958.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2168892 4022412 RPD_1930 Rhodopseudomonas palustris BisB5 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_569066.1 2168401 R 316057 CDS YP_569067.1 91976408 4022413 complement(2168885..2169262) 1 NC_007958.1 dihydroneopterin aldolase 2169262 4022413 RPD_1931 Rhodopseudomonas palustris BisB5 dihydroneopterin aldolase YP_569067.1 2168885 R 316057 CDS YP_569068.1 91976409 4022414 complement(2169259..2170437) 1 NC_007958.1 dihydropteroate synthase 2170437 4022414 RPD_1932 Rhodopseudomonas palustris BisB5 dihydropteroate synthase YP_569068.1 2169259 R 316057 CDS YP_569069.1 91976410 4022415 2171035..2172423 1 NC_007958.1 hypothetical protein 2172423 4022415 RPD_1933 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569069.1 2171035 D 316057 CDS YP_569070.1 91976411 4022416 complement(2172685..2173092) 1 NC_007958.1 hypothetical protein 2173092 4022416 RPD_1934 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569070.1 2172685 R 316057 CDS YP_569071.1 91976412 4022417 complement(2173112..2173495) 1 NC_007958.1 hypothetical protein 2173495 4022417 RPD_1935 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569071.1 2173112 R 316057 CDS YP_569072.1 91976413 4022418 2173810..2175420 1 NC_007958.1 hypothetical protein 2175420 4022418 RPD_1936 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569072.1 2173810 D 316057 CDS YP_569073.1 91976414 4022419 2175443..2176849 1 NC_007958.1 hypothetical protein 2176849 4022419 RPD_1937 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569073.1 2175443 D 316057 CDS YP_569074.1 91976415 4022420 complement(2177139..2177918) 1 NC_007958.1 aldolase II superfamily protein 2177918 4022420 RPD_1938 Rhodopseudomonas palustris BisB5 aldolase II superfamily protein YP_569074.1 2177139 R 316057 CDS YP_569075.1 91976416 4022421 2178227..2179135 1 NC_007958.1 hypothetical protein 2179135 4022421 RPD_1939 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569075.1 2178227 D 316057 CDS YP_569076.1 91976417 4022422 2179307..2179723 1 NC_007958.1 MucR family transcriptional regulator 2179723 4022422 RPD_1940 Rhodopseudomonas palustris BisB5 MucR family transcriptional regulator YP_569076.1 2179307 D 316057 CDS YP_569077.1 91976418 4022423 2179955..2180557 1 NC_007958.1 hypothetical protein 2180557 4022423 RPD_1941 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569077.1 2179955 D 316057 CDS YP_569078.1 91976419 4022424 complement(2180580..2181011) 1 NC_007958.1 Fe-S metabolism associated SufE 2181011 4022424 RPD_1942 Rhodopseudomonas palustris BisB5 Fe-S metabolism associated SufE YP_569078.1 2180580 R 316057 CDS YP_569079.1 91976420 4022425 complement(2181120..2181524) 1 NC_007958.1 hypothetical protein 2181524 4022425 RPD_1943 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569079.1 2181120 R 316057 CDS YP_569080.1 91976421 4022426 2181926..2183749 1 NC_007958.1 multi-sensor signal transduction histidine kinase 2183749 4022426 RPD_1944 Rhodopseudomonas palustris BisB5 multi-sensor signal transduction histidine kinase YP_569080.1 2181926 D 316057 CDS YP_569081.1 91976422 4022427 2183742..2184542 1 NC_007958.1 peptidoglycan binding domain-containing protein 2184542 4022427 RPD_1945 Rhodopseudomonas palustris BisB5 peptidoglycan binding domain-containing protein YP_569081.1 2183742 D 316057 CDS YP_569082.1 91976423 4022428 2184637..2184984 1 NC_007958.1 hypothetical protein 2184984 4022428 RPD_1946 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569082.1 2184637 D 316057 CDS YP_569083.1 91976424 4022429 complement(2185117..2186088) 1 NC_007958.1 hypothetical protein 2186088 4022429 RPD_1947 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569083.1 2185117 R 316057 CDS YP_569084.1 91976425 4022430 complement(2186339..2187385) 1 NC_007958.1 polysaccharide deacetylase 2187385 4022430 RPD_1948 Rhodopseudomonas palustris BisB5 polysaccharide deacetylase YP_569084.1 2186339 R 316057 CDS YP_569085.1 91976426 4022431 complement(2187465..2187980) 1 NC_007958.1 hypothetical protein 2187980 4022431 RPD_1949 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569085.1 2187465 R 316057 CDS YP_569086.1 91976427 4022432 2188366..2189142 1 NC_007958.1 hypothetical protein 2189142 4022432 RPD_1950 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569086.1 2188366 D 316057 CDS YP_569087.1 91976428 4022433 complement(2189156..2189719) 1 NC_007958.1 hypothetical protein 2189719 4022433 RPD_1951 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569087.1 2189156 R 316057 CDS YP_569088.1 91976429 4022434 complement(2189716..2190294) 1 NC_007958.1 hypothetical protein 2190294 4022434 RPD_1952 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569088.1 2189716 R 316057 CDS YP_569089.1 91976430 4022435 complement(2190326..2192578) 1 NC_007958.1 penicillin-binding protein 1A 2192578 4022435 RPD_1953 Rhodopseudomonas palustris BisB5 penicillin-binding protein 1A YP_569089.1 2190326 R 316057 CDS YP_569090.1 91976431 4022436 2193043..2195064 1 NC_007958.1 ATPase 2195064 4022436 RPD_1954 Rhodopseudomonas palustris BisB5 ATPase YP_569090.1 2193043 D 316057 CDS YP_569091.1 91976432 4022437 2195061..2195570 1 NC_007958.1 hypothetical protein 2195570 4022437 RPD_1955 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569091.1 2195061 D 316057 CDS YP_569092.1 91976433 4022438 complement(2195992..2197059) 1 NC_007958.1 twin-arginine translocation pathway signal 2197059 4022438 RPD_1956 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_569092.1 2195992 R 316057 CDS YP_569093.1 91976434 4022439 2197446..2197742 1 NC_007958.1 hypothetical protein 2197742 4022439 RPD_1957 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569093.1 2197446 D 316057 CDS YP_569094.1 91976435 4022440 2197957..2199549 1 NC_007958.1 major facilitator transporter 2199549 4022440 RPD_1958 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_569094.1 2197957 D 316057 CDS YP_569095.1 91976436 4022441 2199725..2201128 1 NC_007958.1 hypothetical protein 2201128 4022441 RPD_1959 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569095.1 2199725 D 316057 CDS YP_569096.1 91976437 4022442 2201308..2201475 1 NC_007958.1 Flp/Fap pilin component 2201475 4022442 RPD_1960 Rhodopseudomonas palustris BisB5 Flp/Fap pilin component YP_569096.1 2201308 D 316057 CDS YP_569097.1 91976438 4022443 2201747..2201881 1 NC_007958.1 hypothetical protein 2201881 4022443 RPD_1961 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569097.1 2201747 D 316057 CDS YP_569098.1 91976439 4022444 2202107..2202337 1 NC_007958.1 hypothetical protein 2202337 4022444 RPD_1962 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569098.1 2202107 D 316057 CDS YP_569099.1 91976440 4022445 2202441..2203316 1 NC_007958.1 hypothetical protein 2203316 4022445 RPD_1963 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569099.1 2202441 D 316057 CDS YP_569100.1 91976441 4022446 2203420..2204580 1 NC_007958.1 hypothetical protein 2204580 4022446 RPD_1964 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569100.1 2203420 D 316057 CDS YP_569101.1 91976442 4022447 complement(2204685..2204972) 1 NC_007958.1 excinuclease ABC subunit C 2204972 4022447 RPD_1965 Rhodopseudomonas palustris BisB5 excinuclease ABC subunit C YP_569101.1 2204685 R 316057 CDS YP_569102.1 91976443 4022448 2205112..2206287 1 NC_007958.1 Phage portal protein, HK97 2206287 4022448 RPD_1966 Rhodopseudomonas palustris BisB5 Phage portal protein, HK97 YP_569102.1 2205112 D 316057 CDS YP_569103.1 91976444 4022449 2206328..2206546 1 NC_007958.1 hypothetical protein 2206546 4022449 RPD_1967 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569103.1 2206328 D 316057 CDS YP_569104.1 91976445 4022450 2206556..2206738 1 NC_007958.1 hypothetical protein 2206738 4022450 RPD_1968 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569104.1 2206556 D 316057 CDS YP_569105.1 91976446 4022451 2207053..2207760 1 NC_007958.1 peptidase U35, phage prohead HK97 2207760 4022451 RPD_1969 Rhodopseudomonas palustris BisB5 peptidase U35, phage prohead HK97 YP_569105.1 2207053 D 316057 CDS YP_569106.1 91976447 4022452 2207879..2209174 1 NC_007958.1 phage major capsid protein, HK97 2209174 4022452 RPD_1970 Rhodopseudomonas palustris BisB5 phage major capsid protein, HK97 YP_569106.1 2207879 D 316057 CDS YP_569107.1 91976448 4022453 complement(2209291..2209785) 1 NC_007958.1 hypothetical protein 2209785 4022453 RPD_1971 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569107.1 2209291 R 316057 CDS YP_569108.1 91976449 4022454 2210219..2211691 1 NC_007958.1 DNA-cytosine methyltransferase 2211691 4022454 RPD_1972 Rhodopseudomonas palustris BisB5 DNA-cytosine methyltransferase YP_569108.1 2210219 D 316057 CDS YP_569109.1 91976450 4022455 2211750..2213102 1 NC_007958.1 ATPase 2213102 4022455 RPD_1973 Rhodopseudomonas palustris BisB5 ATPase YP_569109.1 2211750 D 316057 CDS YP_569110.1 91976451 4022456 2213099..2214403 1 NC_007958.1 hypothetical protein 2214403 4022456 RPD_1974 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569110.1 2213099 D 316057 CDS YP_569111.1 91976452 4022457 2214705..2215352 1 NC_007958.1 hypothetical protein 2215352 4022457 RPD_1975 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569111.1 2214705 D 316057 CDS YP_569112.1 91976453 4022458 2215477..2216589 1 NC_007958.1 hypothetical protein 2216589 4022458 RPD_1976 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569112.1 2215477 D 316057 CDS YP_569113.1 91976454 4022459 2216808..2217128 1 NC_007958.1 hypothetical protein 2217128 4022459 RPD_1977 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569113.1 2216808 D 316057 CDS YP_569114.1 91976455 4022460 complement(2217228..2217545) 1 NC_007958.1 hypothetical protein 2217545 4022460 RPD_1978 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569114.1 2217228 R 316057 CDS YP_569115.1 91976456 4022461 complement(2217764..2218468) 1 NC_007958.1 peptidase S1 and S6, chymotrypsin/Hap 2218468 4022461 RPD_1979 Rhodopseudomonas palustris BisB5 peptidase S1 and S6, chymotrypsin/Hap YP_569115.1 2217764 R 316057 CDS YP_569116.1 91976457 4022462 2218591..2219160 1 NC_007958.1 bacteriophage protein 2219160 4022462 RPD_1980 Rhodopseudomonas palustris BisB5 bacteriophage protein YP_569116.1 2218591 D 316057 CDS YP_569117.1 91976458 4022463 2219157..2219486 1 NC_007958.1 hypothetical protein 2219486 4022463 RPD_1981 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569117.1 2219157 D 316057 CDS YP_569118.1 91976459 4022464 2219557..2219967 1 NC_007958.1 gene transfer agent (GTA) orfg8 2219967 4022464 RPD_1982 Rhodopseudomonas palustris BisB5 gene transfer agent (GTA) orfg8 YP_569118.1 2219557 D 316057 CDS YP_569119.1 91976460 4022465 2219981..2220388 1 NC_007958.1 gene transfer agent (GTA) orf 2220388 4022465 RPD_1983 Rhodopseudomonas palustris BisB5 gene transfer agent (GTA) orf YP_569119.1 2219981 D 316057 CDS YP_569120.1 91976461 4022466 2220396..2220713 1 NC_007958.1 gene transfer agent (GTA) orfg10 2220713 4022466 RPD_1984 Rhodopseudomonas palustris BisB5 gene transfer agent (GTA) orfg10 YP_569120.1 2220396 D 316057 CDS YP_569121.1 91976462 4022467 2220710..2220907 1 NC_007958.1 hypothetical protein 2220907 4022467 RPD_1985 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569121.1 2220710 D 316057 CDS YP_569122.1 91976463 4022468 2220910..2221476 1 NC_007958.1 gene transfer agent (GTA) orfg11 2221476 4022468 RPD_1986 Rhodopseudomonas palustris BisB5 gene transfer agent (GTA) orfg11 YP_569122.1 2220910 D 316057 CDS YP_569123.1 91976464 4022469 2221564..2222199 1 NC_007958.1 hypothetical protein 2222199 4022469 RPD_1987 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569123.1 2221564 D 316057 CDS YP_569124.1 91976465 4022470 2222512..2223873 1 NC_007958.1 Xaa-Pro aminopeptidase-like 2223873 4022470 RPD_1988 Rhodopseudomonas palustris BisB5 Xaa-Pro aminopeptidase-like YP_569124.1 2222512 D 316057 CDS YP_569125.1 91976466 4022471 2223929..2224609 1 NC_007958.1 hypothetical protein 2224609 4022471 RPD_1989 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569125.1 2223929 D 316057 CDS YP_569126.1 91976467 4022472 2224870..2225049 1 NC_007958.1 transposase and inactivated derivative 2225049 4022472 RPD_1990 Rhodopseudomonas palustris BisB5 transposase and inactivated derivative YP_569126.1 2224870 D 316057 CDS YP_569127.1 91976468 4022473 2225261..2226184 1 NC_007958.1 bacteriophage protein 2226184 4022473 RPD_1991 Rhodopseudomonas palustris BisB5 bacteriophage protein YP_569127.1 2225261 D 316057 CDS YP_569128.1 91976469 4022474 2226225..2226668 1 NC_007958.1 putative phage cell wall peptidase, NlpC/P60 2226668 4022474 RPD_1992 Rhodopseudomonas palustris BisB5 putative phage cell wall peptidase, NlpC/P60 YP_569128.1 2226225 D 316057 CDS YP_569129.1 91976470 4022475 2226929..2230780 1 NC_007958.1 gene transfer agent (GTA) orfg15 2230780 4022475 RPD_1993 Rhodopseudomonas palustris BisB5 gene transfer agent (GTA) orfg15 YP_569129.1 2226929 D 316057 CDS YP_569130.1 91976471 4022476 2230793..2232427 1 NC_007958.1 hypothetical protein 2232427 4022476 RPD_1994 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569130.1 2230793 D 316057 CDS YP_569131.1 91976472 4022477 2232549..2233286 1 NC_007958.1 putative glycohydrolase 2233286 4022477 RPD_1995 Rhodopseudomonas palustris BisB5 putative glycohydrolase YP_569131.1 2232549 D 316057 CDS YP_569132.1 91976473 4022478 2233289..2233861 1 NC_007958.1 hypothetical protein 2233861 4022478 RPD_1996 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569132.1 2233289 D 316057 CDS YP_569133.1 91976474 4022479 2233957..2234631 1 NC_007958.1 winged helix family two component transcriptional regulator 2234631 4022479 RPD_1997 Rhodopseudomonas palustris BisB5 winged helix family two component transcriptional regulator YP_569133.1 2233957 D 316057 CDS YP_569134.1 91976475 4022480 2234685..2236082 1 NC_007958.1 periplasmic sensor signal transduction histidine kinase 2236082 4022480 RPD_1998 Rhodopseudomonas palustris BisB5 periplasmic sensor signal transduction histidine kinase YP_569134.1 2234685 D 316057 CDS YP_569135.1 91976476 4022481 2236186..2236707 1 NC_007958.1 LipA a lipoprotein 2236707 4022481 RPD_1999 Rhodopseudomonas palustris BisB5 LipA a lipoprotein YP_569135.1 2236186 D 316057 CDS YP_569136.1 91976477 4022482 2236920..2238320 1 NC_007958.1 hypothetical protein 2238320 4022482 RPD_2000 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569136.1 2236920 D 316057 CDS YP_569137.1 91976478 4022483 2238428..2239585 1 NC_007958.1 cytochrome c-type biogenesis protein cycH 2239585 4022483 RPD_2001 Rhodopseudomonas palustris BisB5 cytochrome c-type biogenesis protein cycH YP_569137.1 2238428 D 316057 CDS YP_569138.1 91976479 4022484 2239710..2240204 1 NC_007958.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 2240204 4022484 RPD_2002 Rhodopseudomonas palustris BisB5 cytochrome c-type biogenesis protein CcmE YP_569138.1 2239710 D 316057 CDS YP_569139.1 91976480 4022485 2240201..2242183 1 NC_007958.1 cytochrome c-type biogenesis protein CcmF 2242183 4022485 RPD_2003 Rhodopseudomonas palustris BisB5 cytochrome c-type biogenesis protein CcmF YP_569139.1 2240201 D 316057 CDS YP_569140.1 91976481 4022486 2242198..2242695 1 NC_007958.1 cytochrome C biogenesis protein 2242695 4022486 RPD_2004 Rhodopseudomonas palustris BisB5 cytochrome C biogenesis protein YP_569140.1 2242198 D 316057 CDS YP_569141.1 91976482 4022487 complement(2242785..2243843) 1 NC_007958.1 hypothetical protein 2243843 4022487 RPD_2005 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569141.1 2242785 R 316057 CDS YP_569142.1 91976483 4022488 complement(2243897..2245933) 1 NC_007958.1 endothelin-converting protein 1 2245933 4022488 RPD_2006 Rhodopseudomonas palustris BisB5 endothelin-converting protein 1 YP_569142.1 2243897 R 316057 CDS YP_569143.1 91976484 4022489 complement(2246081..2246731) 1 NC_007958.1 hypothetical protein 2246731 4022489 RPD_2007 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569143.1 2246081 R 316057 CDS YP_569144.1 91976485 4022490 2247133..2247624 1 NC_007958.1 hypothetical protein 2247624 4022490 RPD_2008 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569144.1 2247133 D 316057 CDS YP_569145.1 91976486 4022491 complement(2247663..2248151) 1 NC_007958.1 hypothetical protein 2248151 4022491 RPD_2009 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569145.1 2247663 R 316057 CDS YP_569146.1 91976487 4022492 complement(2248220..2249125) 1 NC_007958.1 ferredoxin 2249125 4022492 RPD_2010 Rhodopseudomonas palustris BisB5 ferredoxin YP_569146.1 2248220 R 316057 CDS YP_569147.1 91976488 4022493 2249476..2251056 1 NC_007958.1 peptidase S1C, Do 2251056 4022493 RPD_2011 Rhodopseudomonas palustris BisB5 peptidase S1C, Do YP_569147.1 2249476 D 316057 CDS YP_569148.1 91976489 4022494 2251297..2252022 1 NC_007958.1 winged helix family two component transcriptional regulator 2252022 4022494 RPD_2012 Rhodopseudomonas palustris BisB5 winged helix family two component transcriptional regulator YP_569148.1 2251297 D 316057 CDS YP_569149.1 91976490 4022495 2252006..2253478 1 NC_007958.1 periplasmic sensor signal transduction histidine kinase 2253478 4022495 RPD_2013 Rhodopseudomonas palustris BisB5 periplasmic sensor signal transduction histidine kinase YP_569149.1 2252006 D 316057 CDS YP_569150.1 91976491 4022496 2253475..2256444 1 NC_007958.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 2256444 4022496 RPD_2014 Rhodopseudomonas palustris BisB5 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_569150.1 2253475 D 316057 CDS YP_569151.1 91976492 4022497 complement(2256448..2256738) 1 NC_007958.1 hypothetical protein 2256738 4022497 RPD_2015 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569151.1 2256448 R 316057 CDS YP_569152.1 91976493 4022498 complement(2256871..2257884) 1 NC_007958.1 helix-turn-helix, AraC type 2257884 4022498 RPD_2016 Rhodopseudomonas palustris BisB5 helix-turn-helix, AraC type YP_569152.1 2256871 R 316057 CDS YP_569153.1 91976494 4022499 2258299..2261769 1 NC_007958.1 outer membrane autotransporter barrel domain-containing protein 2261769 4022499 RPD_2017 Rhodopseudomonas palustris BisB5 outer membrane autotransporter barrel domain-containing protein YP_569153.1 2258299 D 316057 CDS YP_569154.1 91976495 4022500 complement(2261930..2264245) 1 NC_007958.1 ATPase-like ATP-binding protein 2264245 4022500 RPD_2018 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_569154.1 2261930 R 316057 CDS YP_569155.1 91976496 4022501 complement(2264449..2265828) 1 NC_007958.1 cation diffusion facilitator family transporter 2265828 4022501 RPD_2019 Rhodopseudomonas palustris BisB5 cation diffusion facilitator family transporter YP_569155.1 2264449 R 316057 CDS YP_569156.1 91976497 4022502 complement(2265961..2266929) 1 NC_007958.1 zinc-binding alcohol dehydrogenase 2266929 4022502 RPD_2020 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_569156.1 2265961 R 316057 CDS YP_569157.1 91976498 4022503 complement(2266957..2267952) 1 NC_007958.1 2-nitropropane dioxygenase 2267952 4022503 RPD_2021 Rhodopseudomonas palustris BisB5 2-nitropropane dioxygenase YP_569157.1 2266957 R 316057 CDS YP_569158.1 91976499 4022504 complement(2268201..2268986) 1 NC_007958.1 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2268986 4022504 RPD_2022 Rhodopseudomonas palustris BisB5 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_569158.1 2268201 R 316057 CDS YP_569159.1 91976500 4022505 complement(2269138..2270112) 1 NC_007958.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 2270112 4022505 RPD_2023 Rhodopseudomonas palustris BisB5 2-dehydropantoate 2-reductase YP_569159.1 2269138 R 316057 CDS YP_569160.1 91976501 4022506 complement(2270234..2271766) 1 NC_007958.1 hypothetical protein 2271766 4022506 RPD_2024 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569160.1 2270234 R 316057 CDS YP_569161.1 91976502 4022507 complement(2271794..2272291) 1 NC_007958.1 hypothetical protein 2272291 4022507 RPD_2025 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569161.1 2271794 R 316057 CDS YP_569162.1 91976503 4022508 complement(2272374..2273387) 1 NC_007958.1 hypothetical protein 2273387 4022508 RPD_2026 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569162.1 2272374 R 316057 CDS YP_569163.1 91976504 4022509 complement(2273593..2274870) 1 NC_007958.1 catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; formyl-coenzyme A transferase 2274870 4022509 RPD_2027 Rhodopseudomonas palustris BisB5 formyl-coenzyme A transferase YP_569163.1 2273593 R 316057 CDS YP_569164.1 91976505 4022510 complement(2275006..2275788) 1 NC_007958.1 GntR family transcriptional regulator 2275788 4022510 RPD_2028 Rhodopseudomonas palustris BisB5 GntR family transcriptional regulator YP_569164.1 2275006 R 316057 CDS YP_569165.1 91976506 4022511 complement(2275915..2276307) 1 NC_007958.1 hypothetical protein 2276307 4022511 RPD_2029 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569165.1 2275915 R 316057 CDS YP_569166.1 91976507 4022512 2276430..2277356 1 NC_007958.1 possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 2277356 4022512 RPD_2030 Rhodopseudomonas palustris BisB5 pyrroloquinoline quinone biosynthesis protein PqqB YP_569166.1 2276430 D 316057 CDS YP_569167.1 91976508 4022513 2277362..2278117 1 NC_007958.1 Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 2278117 4022513 RPD_2031 Rhodopseudomonas palustris BisB5 pyrroloquinoline quinone biosynthesis protein PqqC YP_569167.1 2277362 D 316057 CDS YP_569168.1 91976509 4022514 2278127..2278435 1 NC_007958.1 coenzyme PQQ synthesis D 2278435 4022514 RPD_2032 Rhodopseudomonas palustris BisB5 coenzyme PQQ synthesis D YP_569168.1 2278127 D 316057 CDS YP_569169.1 91976510 4022515 2278432..2279619 1 NC_007958.1 pyrroloquinoline quinone biosynthesis protein PqqE 2279619 4022515 RPD_2033 Rhodopseudomonas palustris BisB5 pyrroloquinoline quinone biosynthesis protein PqqE YP_569169.1 2278432 D 316057 CDS YP_569170.1 91976511 4022516 complement(2279945..2281054) 1 NC_007958.1 zinc-binding alcohol dehydrogenase 2281054 4022516 RPD_2034 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_569170.1 2279945 R 316057 CDS YP_569171.1 91976512 4022517 complement(2281270..2282790) 1 NC_007958.1 ATPase 2282790 4022517 RPD_2035 Rhodopseudomonas palustris BisB5 ATPase YP_569171.1 2281270 R 316057 CDS YP_569172.1 91976513 4022518 complement(2282962..2283582) 1 NC_007958.1 regulatory protein TetR 2283582 4022518 RPD_2036 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_569172.1 2282962 R 316057 CDS YP_569173.1 91976514 4022519 2283664..2284755 1 NC_007958.1 secretion protein HlyD 2284755 4022519 RPD_2037 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_569173.1 2283664 D 316057 CDS YP_569174.1 91976515 4022520 2284752..2285825 1 NC_007958.1 secretion protein HlyD 2285825 4022520 RPD_2038 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_569174.1 2284752 D 316057 CDS YP_569175.1 91976516 4022521 2285822..2288878 1 NC_007958.1 acriflavin resistance protein 2288878 4022521 RPD_2039 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_569175.1 2285822 D 316057 CDS YP_569176.1 91976517 4022522 2288875..2289159 1 NC_007958.1 hypothetical protein 2289159 4022522 RPD_2040 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569176.1 2288875 D 316057 CDS YP_569177.1 91976518 4022523 2289189..2290382 1 NC_007958.1 patatin 2290382 4022523 RPD_2041 Rhodopseudomonas palustris BisB5 patatin YP_569177.1 2289189 D 316057 CDS YP_569178.1 91976519 4022524 2290458..2291072 1 NC_007958.1 hypothetical protein 2291072 4022524 RPD_2042 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569178.1 2290458 D 316057 CDS YP_569179.1 91976520 4022525 2291255..2292208 1 NC_007958.1 tRNA-dihydrouridine synthase A 2292208 4022525 RPD_2043 Rhodopseudomonas palustris BisB5 tRNA-dihydrouridine synthase A YP_569179.1 2291255 D 316057 CDS YP_569180.1 91976521 4022526 complement(2292249..2292779) 1 NC_007958.1 hypothetical protein 2292779 4022526 RPD_2044 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569180.1 2292249 R 316057 CDS YP_569181.1 91976522 4022527 complement(2292790..2292996) 1 NC_007958.1 hypothetical protein 2292996 4022527 RPD_2045 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569181.1 2292790 R 316057 CDS YP_569182.1 91976523 4022528 complement(2293042..2294634) 1 NC_007958.1 periplasmic sensor signal transduction histidine kinase 2294634 4022528 RPD_2046 Rhodopseudomonas palustris BisB5 periplasmic sensor signal transduction histidine kinase YP_569182.1 2293042 R 316057 CDS YP_569183.1 91976524 4022529 complement(2294807..2296000) 1 NC_007958.1 3-hydroxyisobutyrate dehydrogenase 2296000 4022529 RPD_2047 Rhodopseudomonas palustris BisB5 3-hydroxyisobutyrate dehydrogenase YP_569183.1 2294807 R 316057 CDS YP_569184.1 91976525 4022530 2296000..2297118 1 NC_007958.1 MRP ATP/GTP-binding protein 2297118 4022530 RPD_2048 Rhodopseudomonas palustris BisB5 MRP ATP/GTP-binding protein YP_569184.1 2296000 D 316057 CDS YP_569185.1 91976526 4022531 2297338..2298426 1 NC_007958.1 twin-arginine translocation pathway signal 2298426 4022531 RPD_2049 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_569185.1 2297338 D 316057 CDS YP_569186.1 91976527 4022532 complement(2298539..2300380) 1 NC_007958.1 TRAP C4-dicarboxylate transport system permease DctM 2300380 4022532 RPD_2050 Rhodopseudomonas palustris BisB5 TRAP C4-dicarboxylate transport system permease DctM YP_569186.1 2298539 R 316057 CDS YP_569187.1 91976528 4022533 complement(2300418..2301011) 1 NC_007958.1 tripartite ATP-independent periplasmic transporter DctQ 2301011 4022533 RPD_2051 Rhodopseudomonas palustris BisB5 tripartite ATP-independent periplasmic transporter DctQ YP_569187.1 2300418 R 316057 CDS YP_569188.1 91976529 4022534 complement(2301181..2302215) 1 NC_007958.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2302215 moaA 4022534 moaA Rhodopseudomonas palustris BisB5 molybdenum cofactor biosynthesis protein A YP_569188.1 2301181 R 316057 CDS YP_569189.1 91976530 4022535 complement(2302322..2302783) 1 NC_007958.1 hypothetical protein 2302783 4022535 RPD_2053 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569189.1 2302322 R 316057 CDS YP_569190.1 91976531 4022536 complement(2302947..2303624) 1 NC_007958.1 phosphoglycolate phosphatase 2303624 4022536 RPD_2054 Rhodopseudomonas palustris BisB5 phosphoglycolate phosphatase YP_569190.1 2302947 R 316057 CDS YP_569191.1 91976532 4022537 2303770..2304468 1 NC_007958.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 2304468 4022537 RPD_2055 Rhodopseudomonas palustris BisB5 ribose-5-phosphate isomerase A YP_569191.1 2303770 D 316057 CDS YP_569192.1 91976533 4022538 2304493..2305002 1 NC_007958.1 hypothetical protein 2305002 4022538 RPD_2056 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569192.1 2304493 D 316057 CDS YP_569193.1 91976534 4022539 2305039..2306424 1 NC_007958.1 glutathione reductase 2306424 4022539 RPD_2057 Rhodopseudomonas palustris BisB5 glutathione reductase YP_569193.1 2305039 D 316057 CDS YP_569194.1 91976535 4022540 2306602..2307990 1 NC_007958.1 phospho-2-dehydro-3-deoxyheptonate aldolase 2307990 4022540 RPD_2058 Rhodopseudomonas palustris BisB5 phospho-2-dehydro-3-deoxyheptonate aldolase YP_569194.1 2306602 D 316057 CDS YP_569195.1 91976536 4022541 2308033..2308395 1 NC_007958.1 diacylglycerol kinase 2308395 4022541 RPD_2059 Rhodopseudomonas palustris BisB5 diacylglycerol kinase YP_569195.1 2308033 D 316057 CDS YP_569196.1 91976537 4022542 2308440..2310197 1 NC_007958.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2310197 nadE 4022542 nadE Rhodopseudomonas palustris BisB5 NAD synthetase YP_569196.1 2308440 D 316057 CDS YP_569197.1 91976538 4022543 complement(2310238..2310651) 1 NC_007958.1 PilT protein-like protein 2310651 4022543 RPD_2061 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_569197.1 2310238 R 316057 CDS YP_569198.1 91976539 4022544 complement(2310648..2310938) 1 NC_007958.1 SpoVT/AbrB-like protein 2310938 4022544 RPD_2062 Rhodopseudomonas palustris BisB5 SpoVT/AbrB-like protein YP_569198.1 2310648 R 316057 CDS YP_569199.1 91976540 4022545 complement(2311136..2312281) 1 NC_007958.1 hypothetical protein 2312281 4022545 RPD_2063 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569199.1 2311136 R 316057 CDS YP_569200.1 91976541 4022546 complement(2312467..2312775) 1 NC_007958.1 hypothetical protein 2312775 4022546 RPD_2064 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569200.1 2312467 R 316057 CDS YP_569201.1 91976542 4022547 2313085..2314476 1 NC_007958.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2314476 cysS 4022547 cysS Rhodopseudomonas palustris BisB5 cysteinyl-tRNA synthetase YP_569201.1 2313085 D 316057 CDS YP_569202.1 91976543 4022548 2314473..2314787 1 NC_007958.1 hypothetical protein 2314787 4022548 RPD_2066 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569202.1 2314473 D 316057 CDS YP_569203.1 91976544 4022549 2314784..2314915 1 NC_007958.1 hypothetical protein 2314915 4022549 RPD_2067 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569203.1 2314784 D 316057 CDS YP_569204.1 91976545 4022550 2314919..2315428 1 NC_007958.1 GCN5-like N-acetyltransferase 2315428 4022550 RPD_2068 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_569204.1 2314919 D 316057 CDS YP_569205.1 91976546 4022551 2315425..2317023 1 NC_007958.1 putative alpha-isopropylmalate/homocitrate synthase family transferase 2317023 4022551 RPD_2069 Rhodopseudomonas palustris BisB5 putative alpha-isopropylmalate/homocitrate synthase family transferase YP_569205.1 2315425 D 316057 CDS YP_569206.1 91976547 4022552 2317197..2318753 1 NC_007958.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 2318753 4022552 RPD_2070 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569206.1 2317197 D 316057 CDS YP_569207.1 91976548 4022553 2318764..2320173 1 NC_007958.1 FAD linked oxidase-like protein 2320173 4022553 RPD_2071 Rhodopseudomonas palustris BisB5 FAD linked oxidase-like protein YP_569207.1 2318764 D 316057 CDS YP_569208.1 91976549 4022554 complement(2320213..2322351) 1 NC_007958.1 cytochrome c, class I 2322351 4022554 RPD_2072 Rhodopseudomonas palustris BisB5 cytochrome c, class I YP_569208.1 2320213 R 316057 CDS YP_569209.1 91976550 4022555 complement(2322632..2323231) 1 NC_007958.1 hypothetical protein 2323231 4022555 RPD_2073 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569209.1 2322632 R 316057 CDS YP_569210.1 91976551 4022556 2323426..2325381 1 NC_007958.1 ABC transporter-like protein 2325381 4022556 RPD_2074 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569210.1 2323426 D 316057 CDS YP_569211.1 91976552 4022557 2325430..2326128 1 NC_007958.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 2326128 4022557 RPD_2075 Rhodopseudomonas palustris BisB5 phosphatidylserine decarboxylase YP_569211.1 2325430 D 316057 CDS YP_569212.1 91976553 4022558 2326204..2327073 1 NC_007958.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 2327073 4022558 RPD_2076 Rhodopseudomonas palustris BisB5 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_569212.1 2326204 D 316057 CDS YP_569213.1 91976554 4022559 2327227..2327946 1 NC_007958.1 hypothetical protein 2327946 4022559 RPD_2077 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569213.1 2327227 D 316057 CDS YP_569214.1 91976555 4022560 2328197..2328970 1 NC_007958.1 MotA/TolQ/ExbB proton channel 2328970 4022560 RPD_2078 Rhodopseudomonas palustris BisB5 MotA/TolQ/ExbB proton channel YP_569214.1 2328197 D 316057 CDS YP_569215.1 91976556 4022561 2329001..2329822 1 NC_007958.1 OmpA/MotB 2329822 4022561 RPD_2079 Rhodopseudomonas palustris BisB5 OmpA/MotB YP_569215.1 2329001 D 316057 CDS YP_569216.1 91976557 4022562 2330150..2330476 1 NC_007958.1 rhodanese-like protein 2330476 4022562 RPD_2080 Rhodopseudomonas palustris BisB5 rhodanese-like protein YP_569216.1 2330150 D 316057 CDS YP_569217.1 91976558 4022563 2330484..2331638 1 NC_007958.1 hypothetical protein 2331638 4022563 RPD_2081 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569217.1 2330484 D 316057 CDS YP_569218.1 91976559 4022564 2331650..2332762 1 NC_007958.1 extracellular solute-binding protein 2332762 4022564 RPD_2082 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_569218.1 2331650 D 316057 CDS YP_569219.1 91976560 4022565 complement(2332775..2334742) 1 NC_007958.1 radical SAM family protein 2334742 4022565 RPD_2083 Rhodopseudomonas palustris BisB5 radical SAM family protein YP_569219.1 2332775 R 316057 CDS YP_569220.1 91976561 4022566 2335255..2336088 1 NC_007958.1 hypothetical protein 2336088 4022566 RPD_2084 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569220.1 2335255 D 316057 CDS YP_569221.1 91976562 4022567 complement(2336188..2337120) 1 NC_007958.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2337120 4022567 RPD_2085 Rhodopseudomonas palustris BisB5 lipid A biosynthesis lauroyl acyltransferase YP_569221.1 2336188 R 316057 CDS YP_569222.1 91976563 4022568 complement(2337120..2338142) 1 NC_007958.1 zinc-binding alcohol dehydrogenase 2338142 4022568 RPD_2086 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_569222.1 2337120 R 316057 CDS YP_569223.1 91976564 4022569 complement(2338177..2339457) 1 NC_007958.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 2339457 4022569 RPD_2087 Rhodopseudomonas palustris BisB5 3-oxoacyl-(acyl carrier protein) synthase II YP_569223.1 2338177 R 316057 CDS YP_569224.1 91976565 4022570 complement(2339486..2340709) 1 NC_007958.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 2340709 4022570 RPD_2088 Rhodopseudomonas palustris BisB5 3-oxoacyl-(acyl carrier protein) synthase II YP_569224.1 2339486 R 316057 CDS YP_569225.1 91976566 4022571 complement(2340702..2341175) 1 NC_007958.1 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 2341175 4022571 RPD_2089 Rhodopseudomonas palustris BisB5 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_569225.1 2340702 R 316057 CDS YP_569226.2 162138289 4022572 complement(2341203..2341484) 1 NC_007958.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 2341484 4022572 RPD_2090 Rhodopseudomonas palustris BisB5 acyl carrier protein YP_569226.2 2341203 R 316057 CDS YP_569227.1 91976568 4022573 complement(2341653..2341982) 1 NC_007958.1 hypothetical protein 2341982 4022573 RPD_2091 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569227.1 2341653 R 316057 CDS YP_569228.1 91976569 4022574 complement(2342157..2342666) 1 NC_007958.1 MgtC/SapB transporter 2342666 4022574 RPD_2092 Rhodopseudomonas palustris BisB5 MgtC/SapB transporter YP_569228.1 2342157 R 316057 CDS YP_569229.1 91976570 4022575 complement(2342721..2343326) 1 NC_007958.1 hypothetical protein 2343326 4022575 RPD_2093 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569229.1 2342721 R 316057 CDS YP_569230.1 91976571 4022576 complement(2343389..2345137) 1 NC_007958.1 hypothetical protein 2345137 4022576 RPD_2094 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569230.1 2343389 R 316057 CDS YP_569231.1 91976572 4022577 2345578..2346123 1 NC_007958.1 hypothetical protein 2346123 4022577 RPD_2095 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569231.1 2345578 D 316057 CDS YP_569232.1 91976573 4022578 complement(2346191..2346871) 1 NC_007958.1 phosphoserine phosphatase SerB 2346871 4022578 RPD_2096 Rhodopseudomonas palustris BisB5 phosphoserine phosphatase SerB YP_569232.1 2346191 R 316057 CDS YP_569233.1 91976574 4022579 2347047..2348018 1 NC_007958.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2348018 miaA 4022579 miaA Rhodopseudomonas palustris BisB5 tRNA delta(2)-isopentenylpyrophosphate transferase YP_569233.1 2347047 D 316057 CDS YP_569234.1 91976575 4022580 2348381..2350159 1 NC_007958.1 acetolactate synthase 3 catalytic subunit 2350159 4022580 RPD_2098 Rhodopseudomonas palustris BisB5 acetolactate synthase 3 catalytic subunit YP_569234.1 2348381 D 316057 CDS YP_569235.1 91976576 4022581 2350200..2351186 1 NC_007958.1 hypothetical protein 2351186 4022581 RPD_2099 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569235.1 2350200 D 316057 CDS YP_569236.1 91976577 4022582 2351346..2351888 1 NC_007958.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2351888 ilvH 4022582 ilvH Rhodopseudomonas palustris BisB5 acetolactate synthase 3 regulatory subunit YP_569236.1 2351346 D 316057 CDS YP_569237.1 91976578 4022583 complement(2351898..2352296) 1 NC_007958.1 putative AtsE 2352296 4022583 RPD_2101 Rhodopseudomonas palustris BisB5 putative AtsE YP_569237.1 2351898 R 316057 CDS YP_569238.1 91976579 4022584 2352674..2353693 1 NC_007958.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2353693 4022584 RPD_2102 Rhodopseudomonas palustris BisB5 ketol-acid reductoisomerase YP_569238.1 2352674 D 316057 CDS YP_569239.1 91976580 4022585 2353817..2354752 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 2354752 4022585 RPD_2103 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_569239.1 2353817 D 316057 CDS YP_569240.1 91976581 4022586 complement(2354768..2356327) 1 NC_007958.1 glycine betaine ABC transporter substrate-binding protein 2356327 4022586 RPD_2104 Rhodopseudomonas palustris BisB5 glycine betaine ABC transporter substrate-binding protein YP_569240.1 2354768 R 316057 CDS YP_569241.1 91976582 4022587 complement(2356324..2357115) 1 NC_007958.1 ABC transporter-like protein 2357115 4022587 RPD_2105 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569241.1 2356324 R 316057 CDS YP_569242.1 91976583 4022588 2357218..2358036 1 NC_007958.1 ABC transporter-like protein 2358036 4022588 RPD_2106 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569242.1 2357218 D 316057 CDS YP_569243.1 91976584 4022589 2358221..2359018 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 2359018 4022589 RPD_2107 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_569243.1 2358221 D 316057 CDS YP_569244.1 91976585 4022590 2359074..2360099 1 NC_007958.1 extracellular solute-binding protein 2360099 4022590 RPD_2108 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_569244.1 2359074 D 316057 CDS YP_569245.1 91976586 4022591 2360111..2360827 1 NC_007958.1 hypothetical protein 2360827 4022591 RPD_2109 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569245.1 2360111 D 316057 CDS YP_569246.1 91976587 4022592 complement(2360828..2362045) 1 NC_007958.1 hypothetical protein 2362045 4022592 RPD_2110 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569246.1 2360828 R 316057 CDS YP_569247.1 91976588 4022593 complement(2362055..2363083) 1 NC_007958.1 biotin synthase 2363083 4022593 RPD_2111 Rhodopseudomonas palustris BisB5 biotin synthase YP_569247.1 2362055 R 316057 CDS YP_569248.1 91976589 4022594 2363594..2365168 1 NC_007958.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2365168 4022594 RPD_2112 Rhodopseudomonas palustris BisB5 2-isopropylmalate synthase YP_569248.1 2363594 D 316057 CDS YP_569249.1 91976590 4022595 2365345..2366349 1 NC_007958.1 TRAP dicarboxylate transporter subunit DctP 2366349 4022595 RPD_2113 Rhodopseudomonas palustris BisB5 TRAP dicarboxylate transporter subunit DctP YP_569249.1 2365345 D 316057 CDS YP_569250.1 91976591 4022596 2366477..2367061 1 NC_007958.1 tripartite ATP-independent periplasmic transporter DctQ 2367061 4022596 RPD_2114 Rhodopseudomonas palustris BisB5 tripartite ATP-independent periplasmic transporter DctQ YP_569250.1 2366477 D 316057 CDS YP_569251.1 91976592 4022597 2367058..2368383 1 NC_007958.1 TRAP C4-dicarboxylate transport system permease DctM 2368383 4022597 RPD_2115 Rhodopseudomonas palustris BisB5 TRAP C4-dicarboxylate transport system permease DctM YP_569251.1 2367058 D 316057 CDS YP_569252.1 91976593 4022598 2368504..2369136 1 NC_007958.1 hypothetical protein 2369136 4022598 RPD_2116 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569252.1 2368504 D 316057 CDS YP_569253.1 91976594 4022600 complement(2369476..2369751) 1 NC_007958.1 hypothetical protein 2369751 4022600 RPD_2117 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569253.1 2369476 R 316057 CDS YP_569254.1 91976595 4022601 complement(2370269..2370622) 1 NC_007958.1 hypothetical protein 2370622 4022601 RPD_2118 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569254.1 2370269 R 316057 CDS YP_569255.1 91976596 4022602 complement(2370619..2371167) 1 NC_007958.1 hypothetical protein 2371167 4022602 RPD_2119 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569255.1 2370619 R 316057 CDS YP_569256.1 91976597 4022603 complement(2371158..2371610) 1 NC_007958.1 hypothetical protein 2371610 4022603 RPD_2120 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569256.1 2371158 R 316057 CDS YP_569257.1 91976598 4022604 complement(2371743..2372051) 1 NC_007958.1 hypothetical protein 2372051 4022604 RPD_2121 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569257.1 2371743 R 316057 CDS YP_569258.1 91976599 4022605 complement(2372063..2374084) 1 NC_007958.1 ATPase 2374084 4022605 RPD_2122 Rhodopseudomonas palustris BisB5 ATPase YP_569258.1 2372063 R 316057 CDS YP_569259.1 91976600 4022606 2374167..2374604 1 NC_007958.1 hypothetical protein 2374604 4022606 RPD_2123 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569259.1 2374167 D 316057 CDS YP_569260.1 91976601 4022607 2375135..2375539 1 NC_007958.1 hypothetical protein 2375539 4022607 RPD_2124 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569260.1 2375135 D 316057 CDS YP_569261.1 91976602 4022608 2375937..2376530 1 NC_007958.1 hypothetical protein 2376530 4022608 RPD_2125 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569261.1 2375937 D 316057 CDS YP_569262.1 91976603 4022609 2376912..2381669 1 NC_007958.1 ATPase 2381669 4022609 RPD_2126 Rhodopseudomonas palustris BisB5 ATPase YP_569262.1 2376912 D 316057 CDS YP_569263.1 91976604 4022610 2381666..2383144 1 NC_007958.1 hypothetical protein 2383144 4022610 RPD_2127 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569263.1 2381666 D 316057 CDS YP_569264.1 91976605 4022611 2383472..2383939 1 NC_007958.1 transposase, mutator type 2383939 4022611 RPD_2128 Rhodopseudomonas palustris BisB5 transposase, mutator type YP_569264.1 2383472 D 316057 CDS YP_569265.1 91976606 4022612 2384554..2384961 1 NC_007958.1 ATPase-like ATP-binding protein 2384961 4022612 RPD_2129 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_569265.1 2384554 D 316057 CDS YP_569266.1 91976607 4022613 2385374..2385910 1 NC_007958.1 hypothetical protein 2385910 4022613 RPD_2130 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569266.1 2385374 D 316057 CDS YP_569267.1 91976608 4022614 2387604..2388521 1 NC_007958.1 cation diffusion facilitator family transporter 2388521 4022614 RPD_2131 Rhodopseudomonas palustris BisB5 cation diffusion facilitator family transporter YP_569267.1 2387604 D 316057 CDS YP_569268.1 91976609 4022615 2389809..2391413 1 NC_007958.1 hypothetical protein 2391413 4022615 RPD_2132 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569268.1 2389809 D 316057 CDS YP_569269.1 91976610 4022616 complement(2392106..2392357) 1 NC_007958.1 hypothetical protein 2392357 4022616 RPD_2133 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569269.1 2392106 R 316057 CDS YP_569270.1 91976611 4022617 complement(2392564..2393094) 1 NC_007958.1 regulatory protein MarR 2393094 4022617 RPD_2134 Rhodopseudomonas palustris BisB5 regulatory protein MarR YP_569270.1 2392564 R 316057 CDS YP_569271.1 91976612 4022618 complement(2393267..2393875) 1 NC_007958.1 DedA family protein 2393875 4022618 RPD_2135 Rhodopseudomonas palustris BisB5 DedA family protein YP_569271.1 2393267 R 316057 CDS YP_569272.1 91976613 4022619 complement(2393980..2394279) 1 NC_007958.1 hypothetical protein 2394279 4022619 RPD_2136 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569272.1 2393980 R 316057 CDS YP_569273.1 91976614 4022620 complement(2394358..2396919) 1 NC_007958.1 heavy metal translocating P-type ATPase 2396919 4022620 RPD_2137 Rhodopseudomonas palustris BisB5 heavy metal translocating P-type ATPase YP_569273.1 2394358 R 316057 CDS YP_569274.1 91976615 4022621 complement(2397084..2397818) 1 NC_007958.1 flagellar basal body rod protein 2397818 4022621 RPD_2138 Rhodopseudomonas palustris BisB5 flagellar basal body rod protein YP_569274.1 2397084 R 316057 CDS YP_569275.1 91976616 4022622 complement(2398141..2398722) 1 NC_007958.1 hypothetical protein 2398722 4022622 RPD_2139 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569275.1 2398141 R 316057 CDS YP_569276.1 91976617 4022623 2399456..2399977 1 NC_007958.1 regulatory protein MarR 2399977 4022623 RPD_2140 Rhodopseudomonas palustris BisB5 regulatory protein MarR YP_569276.1 2399456 D 316057 CDS YP_569277.1 91976618 4022624 2400117..2400503 1 NC_007958.1 hypothetical protein 2400503 4022624 RPD_2141 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569277.1 2400117 D 316057 CDS YP_569278.1 91976619 4022625 2400563..2401834 1 NC_007958.1 outer membrane efflux protein 2401834 4022625 RPD_2142 Rhodopseudomonas palustris BisB5 outer membrane efflux protein YP_569278.1 2400563 D 316057 CDS YP_569279.1 91976620 4022626 2401831..2402817 1 NC_007958.1 secretion protein HlyD 2402817 4022626 RPD_2143 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_569279.1 2401831 D 316057 CDS YP_569280.1 91976621 4022627 2402875..2406087 1 NC_007958.1 heavy metal efflux pump CzcA 2406087 4022627 RPD_2144 Rhodopseudomonas palustris BisB5 heavy metal efflux pump CzcA YP_569280.1 2402875 D 316057 CDS YP_569281.1 91976622 4022628 2406084..2406455 1 NC_007958.1 hypothetical protein 2406455 4022628 RPD_2145 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569281.1 2406084 D 316057 CDS YP_569282.1 91976623 4022629 2406527..2407660 1 NC_007958.1 putative OpgC protein 2407660 4022629 RPD_2146 Rhodopseudomonas palustris BisB5 putative OpgC protein YP_569282.1 2406527 D 316057 CDS YP_569283.1 91976624 4022630 2407689..2408432 1 NC_007958.1 hypothetical protein 2408432 4022630 RPD_2147 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569283.1 2407689 D 316057 CDS YP_569284.1 91976625 4022631 2408627..2409556 1 NC_007958.1 hypothetical protein 2409556 4022631 RPD_2148 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569284.1 2408627 D 316057 CDS YP_569285.1 91976626 4022632 complement(2409519..2409740) 1 NC_007958.1 hypothetical protein 2409740 4022632 RPD_2149 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569285.1 2409519 R 316057 CDS YP_569286.1 91976627 4022633 2409793..2410143 1 NC_007958.1 hypothetical protein 2410143 4022633 RPD_2150 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569286.1 2409793 D 316057 CDS YP_569287.1 91976628 4022634 complement(2410080..2410496) 1 NC_007958.1 hypothetical protein 2410496 4022634 RPD_2151 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569287.1 2410080 R 316057 CDS YP_569288.1 91976629 4022635 complement(2410756..2410995) 1 NC_007958.1 hypothetical protein 2410995 4022635 RPD_2152 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569288.1 2410756 R 316057 CDS YP_569289.1 91976630 4022636 complement(2411391..2412005) 1 NC_007958.1 hypothetical protein 2412005 4022636 RPD_2153 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569289.1 2411391 R 316057 CDS YP_569290.1 91976631 4022637 complement(2412005..2412292) 1 NC_007958.1 hypothetical protein 2412292 4022637 RPD_2154 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569290.1 2412005 R 316057 CDS YP_569291.1 91976632 4022638 2412704..2413210 1 NC_007958.1 hypothetical protein 2413210 4022638 RPD_2155 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569291.1 2412704 D 316057 CDS YP_569292.1 91976633 4022639 complement(2413182..2413499) 1 NC_007958.1 hypothetical protein 2413499 4022639 RPD_2156 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569292.1 2413182 R 316057 CDS YP_569293.1 91976634 4022640 2413644..2414492 1 NC_007958.1 metallophosphoesterase 2414492 4022640 RPD_2157 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_569293.1 2413644 D 316057 CDS YP_569294.1 91976635 4022641 2414492..2414974 1 NC_007958.1 hypothetical protein 2414974 4022641 RPD_2158 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569294.1 2414492 D 316057 CDS YP_569295.1 91976636 4022642 2414971..2415546 1 NC_007958.1 hypothetical protein 2415546 4022642 RPD_2159 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569295.1 2414971 D 316057 CDS YP_569296.1 91976637 4022643 2415543..2415887 1 NC_007958.1 hypothetical protein 2415887 4022643 RPD_2160 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569296.1 2415543 D 316057 CDS YP_569297.1 91976638 4022644 complement(2415919..2416860) 1 NC_007958.1 ATP dependent DNA ligase 2416860 4022644 RPD_2161 Rhodopseudomonas palustris BisB5 ATP dependent DNA ligase YP_569297.1 2415919 R 316057 CDS YP_569298.1 91976639 4022645 2416971..2417291 1 NC_007958.1 hypothetical protein 2417291 4022645 RPD_2162 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569298.1 2416971 D 316057 CDS YP_569299.1 91976640 4022646 2417350..2417493 1 NC_007958.1 hypothetical protein 2417493 4022646 RPD_2163 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569299.1 2417350 D 316057 CDS YP_569300.1 91976641 4022647 2417497..2418372 1 NC_007958.1 hypothetical protein 2418372 4022647 RPD_2164 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569300.1 2417497 D 316057 CDS YP_569301.1 91976642 4022648 2418369..2418911 1 NC_007958.1 hypothetical protein 2418911 4022648 RPD_2165 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569301.1 2418369 D 316057 CDS YP_569302.1 91976643 4022649 2419434..2419847 1 NC_007958.1 hypothetical protein 2419847 4022649 RPD_2166 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569302.1 2419434 D 316057 CDS YP_569303.1 91976644 4022650 2419918..2420547 1 NC_007958.1 hypothetical protein 2420547 4022650 RPD_2167 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569303.1 2419918 D 316057 CDS YP_569304.1 91976645 4022651 2420540..2420830 1 NC_007958.1 hypothetical protein 2420830 4022651 RPD_2168 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569304.1 2420540 D 316057 CDS YP_569305.1 91976646 4022652 complement(2420914..2421399) 1 NC_007958.1 hypothetical protein 2421399 4022652 RPD_2169 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569305.1 2420914 R 316057 CDS YP_569306.1 91976647 4022653 2421854..2422252 1 NC_007958.1 hypothetical protein 2422252 4022653 RPD_2170 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569306.1 2421854 D 316057 CDS YP_569307.1 91976648 4022654 2423335..2423634 1 NC_007958.1 hypothetical protein 2423634 4022654 RPD_2171 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569307.1 2423335 D 316057 CDS YP_569308.1 91976649 4022655 complement(2423786..2424076) 1 NC_007958.1 hypothetical protein 2424076 4022655 RPD_2172 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569308.1 2423786 R 316057 CDS YP_569309.1 91976650 4022656 complement(2425120..2426235) 1 NC_007958.1 hypothetical protein 2426235 4022656 RPD_2173 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569309.1 2425120 R 316057 CDS YP_569310.1 91976651 4022657 2426464..2427186 1 NC_007958.1 regulatory protein LuxR 2427186 4022657 RPD_2174 Rhodopseudomonas palustris BisB5 regulatory protein LuxR YP_569310.1 2426464 D 316057 CDS YP_569311.1 91976652 4022658 2427276..2427914 1 NC_007958.1 autoinducer synthesis protein 2427914 4022658 RPD_2175 Rhodopseudomonas palustris BisB5 autoinducer synthesis protein YP_569311.1 2427276 D 316057 CDS YP_569312.1 91976653 4022659 complement(2428334..2428972) 1 NC_007958.1 hypothetical protein 2428972 4022659 RPD_2176 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569312.1 2428334 R 316057 CDS YP_569313.1 91976654 4022660 complement(2429051..2429299) 1 NC_007958.1 ATPase 2429299 4022660 RPD_2177 Rhodopseudomonas palustris BisB5 ATPase YP_569313.1 2429051 R 316057 CDS YP_569314.1 91976655 4022661 complement(2431151..2432614) 1 NC_007958.1 hypothetical protein 2432614 4022661 RPD_2178 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569314.1 2431151 R 316057 CDS YP_569315.1 91976656 4022662 2432763..2434535 1 NC_007958.1 hypothetical protein 2434535 4022662 RPD_2179 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569315.1 2432763 D 316057 CDS YP_569316.1 91976657 4022663 2434570..2434947 1 NC_007958.1 hypothetical protein 2434947 4022663 RPD_2180 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569316.1 2434570 D 316057 CDS YP_569317.1 91976658 4022664 2435041..2435313 1 NC_007958.1 hypothetical protein 2435313 4022664 RPD_2181 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569317.1 2435041 D 316057 CDS YP_569318.1 91976659 4022665 complement(2435345..2436796) 1 NC_007958.1 hypothetical protein 2436796 4022665 RPD_2182 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569318.1 2435345 R 316057 CDS YP_569319.1 91976660 4022668 2437866..2438936 1 NC_007958.1 putative taurine transport system protein 2438936 4022668 RPD_2183 Rhodopseudomonas palustris BisB5 putative taurine transport system protein YP_569319.1 2437866 D 316057 CDS YP_569320.1 91976661 4022669 2438970..2439788 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 2439788 4022669 RPD_2184 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_569320.1 2438970 D 316057 CDS YP_569321.1 91976662 4022670 2439785..2440576 1 NC_007958.1 ABC transporter-like protein 2440576 4022670 RPD_2185 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569321.1 2439785 D 316057 CDS YP_569322.1 91976663 4022671 2440616..2441458 1 NC_007958.1 hypothetical protein 2441458 4022671 RPD_2186 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569322.1 2440616 D 316057 CDS YP_569323.1 91976664 4022672 2441461..2442096 1 NC_007958.1 hypothetical protein 2442096 4022672 RPD_2187 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569323.1 2441461 D 316057 CDS YP_569324.1 91976665 4022673 2442099..2445650 1 NC_007958.1 allophanate hydrolase subunit 2 2445650 4022673 RPD_2188 Rhodopseudomonas palustris BisB5 allophanate hydrolase subunit 2 YP_569324.1 2442099 D 316057 CDS YP_569325.1 91976666 4022674 complement(2445730..2448126) 1 NC_007958.1 RNA binding S1 2448126 4022674 RPD_2189 Rhodopseudomonas palustris BisB5 RNA binding S1 YP_569325.1 2445730 R 316057 CDS YP_569326.1 91976667 4022675 complement(2448254..2449378) 1 NC_007958.1 acyltransferase 3 2449378 4022675 RPD_2190 Rhodopseudomonas palustris BisB5 acyltransferase 3 YP_569326.1 2448254 R 316057 CDS YP_569327.1 91976668 4022676 2449675..2449845 1 NC_007958.1 Flp/Fap pilin component 2449845 4022676 RPD_2191 Rhodopseudomonas palustris BisB5 Flp/Fap pilin component YP_569327.1 2449675 D 316057 CDS YP_569328.1 91976669 4022677 2450084..2451202 1 NC_007958.1 hypothetical protein 2451202 4022677 RPD_2192 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569328.1 2450084 D 316057 CDS YP_569329.1 91976670 4022678 2451333..2452718 1 NC_007958.1 hypothetical protein 2452718 4022678 RPD_2193 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569329.1 2451333 D 316057 CDS YP_569330.1 91976671 4022679 2452732..2453553 1 NC_007958.1 hypothetical protein 2453553 4022679 RPD_2194 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569330.1 2452732 D 316057 CDS YP_569331.1 91976672 4022680 2453706..2454173 1 NC_007958.1 hypothetical protein 2454173 4022680 RPD_2195 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569331.1 2453706 D 316057 CDS YP_569332.1 91976673 4022681 complement(2454492..2456609) 1 NC_007958.1 periplasmic sensor hybrid histidine kinase 2456609 4022681 RPD_2196 Rhodopseudomonas palustris BisB5 periplasmic sensor hybrid histidine kinase YP_569332.1 2454492 R 316057 CDS YP_569333.1 91976674 4022682 2456796..2457110 1 NC_007958.1 cytochrome c, class I 2457110 4022682 RPD_2197 Rhodopseudomonas palustris BisB5 cytochrome c, class I YP_569333.1 2456796 D 316057 CDS YP_569334.1 91976675 4022683 2457220..2458359 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 2458359 4022683 RPD_2198 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_569334.1 2457220 D 316057 CDS YP_569335.1 91976676 4022684 2458495..2459649 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 2459649 4022684 RPD_2199 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_569335.1 2458495 D 316057 CDS YP_569336.1 91976677 4022685 2459778..2460428 1 NC_007958.1 glutathione S-transferase-like protein 2460428 4022685 RPD_2200 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_569336.1 2459778 D 316057 CDS YP_569337.1 91976678 4022686 2460591..2461418 1 NC_007958.1 AraC family transcriptional regulator 2461418 4022686 RPD_2201 Rhodopseudomonas palustris BisB5 AraC family transcriptional regulator YP_569337.1 2460591 D 316057 CDS YP_569338.1 91976679 4022687 2461548..2462414 1 NC_007958.1 hypothetical protein 2462414 4022687 RPD_2202 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569338.1 2461548 D 316057 CDS YP_569339.1 91976680 4022688 2462581..2464185 1 NC_007958.1 AMP-dependent synthetase and ligase 2464185 4022688 RPD_2203 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_569339.1 2462581 D 316057 CDS YP_569340.1 91976681 4022689 2464351..2465973 1 NC_007958.1 propionyl-CoA carboxylase 2465973 4022689 RPD_2204 Rhodopseudomonas palustris BisB5 propionyl-CoA carboxylase YP_569340.1 2464351 D 316057 CDS YP_569341.1 91976682 4022690 2465985..2467961 1 NC_007958.1 carbamoyl-phosphate synthase L chain, ATP-binding 2467961 4022690 RPD_2205 Rhodopseudomonas palustris BisB5 carbamoyl-phosphate synthase L chain, ATP-binding YP_569341.1 2465985 D 316057 CDS YP_569342.1 91976683 4022691 2467974..2468753 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2468753 4022691 RPD_2206 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_569342.1 2467974 D 316057 CDS YP_569343.1 91976684 4022692 2468939..2470477 1 NC_007958.1 AMP-dependent synthetase and ligase 2470477 4022692 RPD_2207 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_569343.1 2468939 D 316057 CDS YP_569344.1 91976685 4022693 2470573..2472027 1 NC_007958.1 hypothetical protein 2472027 4022693 RPD_2208 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569344.1 2470573 D 316057 CDS YP_569345.1 91976686 4022694 complement(2472057..2473319) 1 NC_007958.1 beta-lactamase 2473319 4022694 RPD_2209 Rhodopseudomonas palustris BisB5 beta-lactamase YP_569345.1 2472057 R 316057 CDS YP_569346.1 91976687 4022695 2473580..2474488 1 NC_007958.1 catechol 1,2-dioxygenase 2474488 4022695 RPD_2210 Rhodopseudomonas palustris BisB5 catechol 1,2-dioxygenase YP_569346.1 2473580 D 316057 CDS YP_569347.1 91976688 4022696 2474504..2475349 1 NC_007958.1 aldo/keto reductase 2475349 4022696 RPD_2211 Rhodopseudomonas palustris BisB5 aldo/keto reductase YP_569347.1 2474504 D 316057 CDS YP_569348.1 91976689 4022697 2475526..2476473 1 NC_007958.1 hypothetical protein 2476473 4022697 RPD_2212 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569348.1 2475526 D 316057 CDS YP_569349.1 91976690 4022698 complement(2476611..2477072) 1 NC_007958.1 regulatory protein AsnC/Lrp 2477072 4022698 RPD_2213 Rhodopseudomonas palustris BisB5 regulatory protein AsnC/Lrp YP_569349.1 2476611 R 316057 CDS YP_569350.1 91976691 4022699 2477204..2479600 1 NC_007958.1 transketolase, central region 2479600 4022699 RPD_2214 Rhodopseudomonas palustris BisB5 transketolase, central region YP_569350.1 2477204 D 316057 CDS YP_569351.1 91976692 4022700 2480027..2481457 1 NC_007958.1 aldehyde dehydrogenase 2481457 4022700 RPD_2215 Rhodopseudomonas palustris BisB5 aldehyde dehydrogenase YP_569351.1 2480027 D 316057 CDS YP_569352.1 91976693 4022701 2481623..2483332 1 NC_007958.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2483332 4022701 RPD_2216 Rhodopseudomonas palustris BisB5 dihydroxy-acid dehydratase YP_569352.1 2481623 D 316057 CDS YP_569353.1 91976694 4022702 complement(2483345..2483623) 1 NC_007958.1 hypothetical protein 2483623 4022702 RPD_2217 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569353.1 2483345 R 316057 CDS YP_569354.1 91976695 4022703 2483750..2484445 1 NC_007958.1 hypothetical protein 2484445 4022703 RPD_2218 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569354.1 2483750 D 316057 CDS YP_569355.1 91976696 4022704 2484863..2486032 1 NC_007958.1 hypothetical protein 2486032 4022704 RPD_2219 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569355.1 2484863 D 316057 CDS YP_569356.1 91976697 4022705 2486234..2486545 1 NC_007958.1 hypothetical protein 2486545 4022705 RPD_2220 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569356.1 2486234 D 316057 CDS YP_569357.1 91976698 4022706 complement(2486680..2486958) 1 NC_007958.1 hypothetical protein 2486958 4022706 RPD_2221 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569357.1 2486680 R 316057 CDS YP_569358.1 91976699 4022707 complement(2487997..2488749) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 2488749 4022707 RPD_2222 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_569358.1 2487997 R 316057 CDS YP_569359.1 91976700 4022708 2488858..2489172 1 NC_007958.1 regulatory protein ArsR 2489172 4022708 RPD_2223 Rhodopseudomonas palustris BisB5 regulatory protein ArsR YP_569359.1 2488858 D 316057 CDS YP_569360.1 91976701 4022709 complement(2489305..2490024) 1 NC_007958.1 YgfB and YecA 2490024 4022709 RPD_2224 Rhodopseudomonas palustris BisB5 YgfB and YecA YP_569360.1 2489305 R 316057 CDS YP_569361.1 91976702 4022710 2490303..2490653 1 NC_007958.1 hypothetical protein 2490653 4022710 RPD_2225 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569361.1 2490303 D 316057 CDS YP_569362.1 91976703 4022711 2490663..2491073 1 NC_007958.1 transcriptional regulator 2491073 4022711 RPD_2226 Rhodopseudomonas palustris BisB5 transcriptional regulator YP_569362.1 2490663 D 316057 CDS YP_569363.1 91976704 4022712 complement(2491839..2493482) 1 NC_007958.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is co-regulated with symbiotic nitrogen fixation genes; chaperonin GroEL 2493482 groEL 4022712 groEL Rhodopseudomonas palustris BisB5 chaperonin GroEL YP_569363.1 2491839 R 316057 CDS YP_569364.1 91976705 4022713 complement(2493642..2493959) 1 NC_007958.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2493959 groES 4022713 groES Rhodopseudomonas palustris BisB5 co-chaperonin GroES YP_569364.1 2493642 R 316057 CDS YP_569365.1 91976706 4022714 2494300..2494584 1 NC_007958.1 hypothetical protein 2494584 4022714 RPD_2229 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569365.1 2494300 D 316057 CDS YP_569366.1 91976707 4022715 2494661..2494924 1 NC_007958.1 hypothetical protein 2494924 4022715 RPD_2230 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569366.1 2494661 D 316057 CDS YP_569367.1 91976708 4022716 2494925..2495626 1 NC_007958.1 hypothetical protein 2495626 4022716 RPD_2231 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569367.1 2494925 D 316057 CDS YP_569368.1 91976709 4022717 complement(2495632..2496882) 1 NC_007958.1 Na+ dependent nucleoside transporter-like protein 2496882 4022717 RPD_2232 Rhodopseudomonas palustris BisB5 Na+ dependent nucleoside transporter-like protein YP_569368.1 2495632 R 316057 CDS YP_569369.1 91976710 4022718 2497073..2498176 1 NC_007958.1 RuBisCO-like protein 2498176 4022718 RPD_2233 Rhodopseudomonas palustris BisB5 RuBisCO-like protein YP_569369.1 2497073 D 316057 CDS YP_569370.1 91976711 4022719 2498166..2498645 1 NC_007958.1 cupin 2 barrel domain-containing protein 2498645 4022719 RPD_2234 Rhodopseudomonas palustris BisB5 cupin 2 barrel domain-containing protein YP_569370.1 2498166 D 316057 CDS YP_569371.1 91976712 4022720 complement(2498669..2499433) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 2499433 4022720 RPD_2235 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_569371.1 2498669 R 316057 CDS YP_569372.1 91976713 4022721 complement(2499511..2500053) 1 NC_007958.1 GCN5-like N-acetyltransferase 2500053 4022721 RPD_2236 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_569372.1 2499511 R 316057 CDS YP_569373.1 91976714 4022722 complement(2500149..2500895) 1 NC_007958.1 putative proteasome-type protease 2500895 4022722 RPD_2237 Rhodopseudomonas palustris BisB5 putative proteasome-type protease YP_569373.1 2500149 R 316057 CDS YP_569374.1 91976715 4022723 complement(2501148..2501972) 1 NC_007958.1 transglutaminase-like protein 2501972 4022723 RPD_2238 Rhodopseudomonas palustris BisB5 transglutaminase-like protein YP_569374.1 2501148 R 316057 CDS YP_569375.1 91976716 4022724 complement(2502125..2503069) 1 NC_007958.1 hypothetical protein 2503069 4022724 RPD_2239 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569375.1 2502125 R 316057 CDS YP_569376.1 91976717 4022725 complement(2503210..2504679) 1 NC_007958.1 hypothetical protein 2504679 4022725 RPD_2240 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569376.1 2503210 R 316057 CDS YP_569377.1 91976718 4022726 2504841..2505578 1 NC_007958.1 molybdopterin binding domain-containing protein 2505578 4022726 RPD_2241 Rhodopseudomonas palustris BisB5 molybdopterin binding domain-containing protein YP_569377.1 2504841 D 316057 CDS YP_569378.1 91976719 4022727 2505599..2506057 1 NC_007958.1 phenylacetic acid degradation-like protein 2506057 4022727 RPD_2242 Rhodopseudomonas palustris BisB5 phenylacetic acid degradation-like protein YP_569378.1 2505599 D 316057 CDS YP_569379.1 91976720 4022728 2506030..2506548 1 NC_007958.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 2506548 4022728 RPD_2243 Rhodopseudomonas palustris BisB5 xanthine-guanine phosphoribosyltransferase YP_569379.1 2506030 D 316057 CDS YP_569380.1 91976721 4022729 2506558..2507226 1 NC_007958.1 hypothetical protein 2507226 4022729 RPD_2244 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569380.1 2506558 D 316057 CDS YP_569381.1 91976722 4022730 complement(2507369..2508391) 1 NC_007958.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 2508391 4022730 RPD_2245 Rhodopseudomonas palustris BisB5 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_569381.1 2507369 R 316057 CDS YP_569382.1 91976723 4022731 2508529..2509242 1 NC_007958.1 glutathione S-transferase-like protein 2509242 4022731 RPD_2246 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_569382.1 2508529 D 316057 CDS YP_569383.1 91976724 4022732 2509409..2510041 1 NC_007958.1 DSBA oxidoreductase 2510041 4022732 RPD_2247 Rhodopseudomonas palustris BisB5 DSBA oxidoreductase YP_569383.1 2509409 D 316057 CDS YP_569384.1 91976725 4022733 2510041..2511015 1 NC_007958.1 zinc-binding alcohol dehydrogenase 2511015 4022733 RPD_2248 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_569384.1 2510041 D 316057 CDS YP_569385.1 91976726 4022734 2511096..2511560 1 NC_007958.1 MaoC-like dehydratase 2511560 4022734 RPD_2249 Rhodopseudomonas palustris BisB5 MaoC-like dehydratase YP_569385.1 2511096 D 316057 CDS YP_569386.1 91976727 4022735 2511580..2512497 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 2512497 4022735 RPD_2250 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_569386.1 2511580 D 316057 CDS YP_569387.1 91976728 4022736 2512726..2513970 1 NC_007958.1 hypothetical protein 2513970 4022736 RPD_2251 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569387.1 2512726 D 316057 CDS YP_569388.1 91976729 4022737 complement(2514033..2515115) 1 NC_007958.1 alanine racemase-like protein 2515115 4022737 RPD_2252 Rhodopseudomonas palustris BisB5 alanine racemase-like protein YP_569388.1 2514033 R 316057 CDS YP_569389.1 91976730 4022738 complement(2515138..2516961) 1 NC_007958.1 ABC transporter-like protein 2516961 4022738 RPD_2253 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569389.1 2515138 R 316057 CDS YP_569390.1 91976731 4022739 complement(2516972..2517466) 1 NC_007958.1 hypothetical protein 2517466 4022739 RPD_2254 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569390.1 2516972 R 316057 CDS YP_569391.1 91976732 4022740 2517577..2518377 1 NC_007958.1 hypothetical protein 2518377 4022740 RPD_2255 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569391.1 2517577 D 316057 CDS YP_569392.1 91976733 4022741 2518554..2519765 1 NC_007958.1 extracellular ligand-binding receptor 2519765 4022741 RPD_2256 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_569392.1 2518554 D 316057 CDS YP_569393.1 91976734 4022742 complement(2519972..2522347) 1 NC_007958.1 carbon-monoxide dehydrogenase 2522347 4022742 RPD_2257 Rhodopseudomonas palustris BisB5 carbon-monoxide dehydrogenase YP_569393.1 2519972 R 316057 CDS YP_569394.1 91976735 4022743 2522774..2523751 1 NC_007958.1 Ppx/GppA phosphatase 2523751 4022743 RPD_2258 Rhodopseudomonas palustris BisB5 Ppx/GppA phosphatase YP_569394.1 2522774 D 316057 CDS YP_569395.1 91976736 4022744 2523819..2524526 1 NC_007958.1 ribosomal RNA methyltransferase RrmJ/FtsJ 2524526 4022744 RPD_2259 Rhodopseudomonas palustris BisB5 ribosomal RNA methyltransferase RrmJ/FtsJ YP_569395.1 2523819 D 316057 CDS YP_569396.1 91976737 4022745 complement(2525043..2526557) 1 NC_007958.1 major facilitator transporter 2526557 4022745 RPD_2260 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_569396.1 2525043 R 316057 CDS YP_569397.1 91976738 4022746 2526669..2526917 1 NC_007958.1 hypothetical protein 2526917 4022746 RPD_2261 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569397.1 2526669 D 316057 CDS YP_569398.1 91976739 4022747 2526972..2527292 1 NC_007958.1 hypothetical protein 2527292 4022747 RPD_2262 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569398.1 2526972 D 316057 CDS YP_569399.1 91976740 4022748 2527276..2527941 1 NC_007958.1 hypothetical protein 2527941 4022748 RPD_2263 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569399.1 2527276 D 316057 CDS YP_569400.1 91976741 4022749 2528129..2529625 1 NC_007958.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 2529625 4022749 RPD_2264 Rhodopseudomonas palustris BisB5 inosine 5'-monophosphate dehydrogenase YP_569400.1 2528129 D 316057 CDS YP_569401.1 91976742 4022750 2529876..2530901 1 NC_007958.1 zinc-binding alcohol dehydrogenase 2530901 4022750 RPD_2265 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_569401.1 2529876 D 316057 CDS YP_569402.1 91976743 4022751 2530882..2531715 1 NC_007958.1 hypothetical protein 2531715 4022751 RPD_2266 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569402.1 2530882 D 316057 CDS YP_569403.1 91976744 4022752 2531747..2532169 1 NC_007958.1 hypothetical protein 2532169 4022752 RPD_2267 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569403.1 2531747 D 316057 CDS YP_569404.1 91976745 4022753 2532202..2533506 1 NC_007958.1 Fmu (Sun) 2533506 4022753 RPD_2268 Rhodopseudomonas palustris BisB5 Fmu (Sun) YP_569404.1 2532202 D 316057 CDS YP_569405.1 91976746 4022754 2533666..2535336 1 NC_007958.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2535336 guaA 4022754 guaA Rhodopseudomonas palustris BisB5 GMP synthase YP_569405.1 2533666 D 316057 CDS YP_569406.1 91976747 4022758 complement(2537864..2538502) 1 NC_007958.1 hypothetical protein 2538502 4022758 RPD_2273 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569406.1 2537864 R 316057 CDS YP_569407.1 91976748 4022759 complement(2538801..2539067) 1 NC_007958.1 conjugal transfer TraD 2539067 4022759 RPD_2274 Rhodopseudomonas palustris BisB5 conjugal transfer TraD YP_569407.1 2538801 R 316057 CDS YP_569408.1 91976749 4022760 complement(2539069..2539401) 1 NC_007958.1 hypothetical protein 2539401 4022760 RPD_2275 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569408.1 2539069 R 316057 CDS YP_569409.1 91976750 4022761 2539567..2542587 1 NC_007958.1 MobA/MobL family protein; conjugal transfer relaxase TraA 2542587 4022761 RPD_2276 Rhodopseudomonas palustris BisB5 conjugal transfer relaxase TraA YP_569409.1 2539567 D 316057 CDS YP_569410.1 91976751 4022762 2542706..2542921 1 NC_007958.1 prophage CP4-57 regulatory 2542921 4022762 RPD_2277 Rhodopseudomonas palustris BisB5 prophage CP4-57 regulatory YP_569410.1 2542706 D 316057 CDS YP_569411.1 91976752 4022763 2543178..2543468 1 NC_007958.1 transposase IS3/IS911 2543468 4022763 RPD_2278 Rhodopseudomonas palustris BisB5 transposase IS3/IS911 YP_569411.1 2543178 D 316057 CDS YP_569412.1 91976753 4022764 complement(2543646..2544050) 1 NC_007958.1 hypothetical protein 2544050 4022764 RPD_2279 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569412.1 2543646 R 316057 CDS YP_569413.1 91976754 4022765 complement(2544190..2545107) 1 NC_007958.1 transcriptional regulator-like 2545107 4022765 RPD_2280 Rhodopseudomonas palustris BisB5 transcriptional regulator-like YP_569413.1 2544190 R 316057 CDS YP_569414.1 91976755 4022766 complement(2545104..2545697) 1 NC_007958.1 hypothetical protein 2545697 4022766 RPD_2281 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569414.1 2545104 R 316057 CDS YP_569415.1 91976756 4022767 complement(2545778..2546719) 1 NC_007958.1 antirestriction protein ArdC 2546719 4022767 RPD_2282 Rhodopseudomonas palustris BisB5 antirestriction protein ArdC YP_569415.1 2545778 R 316057 CDS YP_569416.1 91976757 4022768 complement(2546920..2547426) 1 NC_007958.1 hypothetical protein 2547426 4022768 RPD_2283 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569416.1 2546920 R 316057 CDS YP_569417.1 91976758 4022769 2547486..2548076 1 NC_007958.1 hypothetical protein 2548076 4022769 RPD_2284 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569417.1 2547486 D 316057 CDS YP_569418.1 91976759 4022770 2548132..2549448 1 NC_007958.1 hypothetical protein 2549448 4022770 RPD_2285 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569418.1 2548132 D 316057 CDS YP_569419.1 91976760 4022771 2549448..2550506 1 NC_007958.1 hypothetical protein 2550506 4022771 RPD_2286 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569419.1 2549448 D 316057 CDS YP_569420.1 91976761 4022772 2550620..2550907 1 NC_007958.1 hypothetical protein 2550907 4022772 RPD_2287 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569420.1 2550620 D 316057 CDS YP_569421.1 91976762 4022773 2550900..2552528 1 NC_007958.1 hypothetical protein 2552528 4022773 RPD_2288 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569421.1 2550900 D 316057 CDS YP_569422.1 91976763 4022774 complement(2552543..2554171) 1 NC_007958.1 superfamily I DNA/RNA helicase-like protein 2554171 4022774 RPD_2289 Rhodopseudomonas palustris BisB5 superfamily I DNA/RNA helicase-like protein YP_569422.1 2552543 R 316057 CDS YP_569423.1 91976764 4022775 complement(2554273..2556282) 1 NC_007958.1 ATP-dependent OLD family endonuclease 2556282 4022775 RPD_2290 Rhodopseudomonas palustris BisB5 ATP-dependent OLD family endonuclease YP_569423.1 2554273 R 316057 CDS YP_569424.1 91976765 4022776 2556737..2557174 1 NC_007958.1 hypothetical protein 2557174 4022776 RPD_2291 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569424.1 2556737 D 316057 CDS YP_569425.1 91976766 4022777 complement(2557198..2558232) 1 NC_007958.1 patatin 2558232 4022777 RPD_2292 Rhodopseudomonas palustris BisB5 patatin YP_569425.1 2557198 R 316057 CDS YP_569426.1 91976767 4022778 complement(2558229..2558639) 1 NC_007958.1 hypothetical protein 2558639 4022778 RPD_2293 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569426.1 2558229 R 316057 CDS YP_569427.1 91976768 4022779 complement(2558681..2559928) 1 NC_007958.1 hypothetical protein 2559928 4022779 RPD_2294 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569427.1 2558681 R 316057 CDS YP_569428.1 91976769 4022780 2560110..2560430 1 NC_007958.1 transcriptional regulator 2560430 4022780 RPD_2295 Rhodopseudomonas palustris BisB5 transcriptional regulator YP_569428.1 2560110 D 316057 CDS YP_569429.1 91976770 4022781 2560427..2561350 1 NC_007958.1 hypothetical protein 2561350 4022781 RPD_2296 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569429.1 2560427 D 316057 CDS YP_569430.1 91976771 4022782 2561370..2562002 1 NC_007958.1 hypothetical protein 2562002 4022782 RPD_2297 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569430.1 2561370 D 316057 CDS YP_569431.1 91976772 4022783 2562005..2563999 1 NC_007958.1 hypothetical protein 2563999 4022783 RPD_2298 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569431.1 2562005 D 316057 CDS YP_569432.1 91976773 4022784 complement(2564406..2565329) 1 NC_007958.1 hypothetical protein 2565329 4022784 RPD_2299 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569432.1 2564406 R 316057 CDS YP_569433.1 91976774 4022787 complement(2566056..2567240) 1 NC_007958.1 acetylornithine and succinylornithine aminotransferases 2567240 4022787 RPD_2300 Rhodopseudomonas palustris BisB5 acetylornithine and succinylornithine aminotransferases YP_569433.1 2566056 R 316057 CDS YP_569434.1 91976775 4022788 complement(2567237..2568502) 1 NC_007958.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 2568502 4022788 RPD_2301 Rhodopseudomonas palustris BisB5 5-aminolevulinate synthase YP_569434.1 2567237 R 316057 CDS YP_569435.1 91976776 4022789 complement(2568499..2569365) 1 NC_007958.1 pyridoxal kinase 2569365 4022789 RPD_2302 Rhodopseudomonas palustris BisB5 pyridoxal kinase YP_569435.1 2568499 R 316057 CDS YP_569436.1 91976777 4022790 complement(2569362..2570627) 1 NC_007958.1 benzoate transporter 2570627 4022790 RPD_2303 Rhodopseudomonas palustris BisB5 benzoate transporter YP_569436.1 2569362 R 316057 CDS YP_569437.1 91976778 4022791 2570747..2572174 1 NC_007958.1 regulatory protein GntR 2572174 4022791 RPD_2304 Rhodopseudomonas palustris BisB5 regulatory protein GntR YP_569437.1 2570747 D 316057 CDS YP_569438.1 91976779 4022792 2572328..2573632 1 NC_007958.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2573632 4022792 RPD_2305 Rhodopseudomonas palustris BisB5 serine hydroxymethyltransferase YP_569438.1 2572328 D 316057 CDS YP_569439.1 91976780 4022793 2573651..2574466 1 NC_007958.1 hypothetical protein 2574466 4022793 RPD_2306 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569439.1 2573651 D 316057 CDS YP_569440.1 91976781 4022794 complement(2574611..2575009) 1 NC_007958.1 Cu(I)-responsive transcriptional regulator 2575009 4022794 RPD_2307 Rhodopseudomonas palustris BisB5 Cu(I)-responsive transcriptional regulator YP_569440.1 2574611 R 316057 CDS YP_569441.1 91976782 4022795 complement(2575121..2577646) 1 NC_007958.1 heavy metal translocating P-type ATPase 2577646 4022795 RPD_2308 Rhodopseudomonas palustris BisB5 heavy metal translocating P-type ATPase YP_569441.1 2575121 R 316057 CDS YP_569442.1 91976783 4022796 2577884..2578087 1 NC_007958.1 heavy metal transport/detoxification protein 2578087 4022796 RPD_2309 Rhodopseudomonas palustris BisB5 heavy metal transport/detoxification protein YP_569442.1 2577884 D 316057 CDS YP_569443.1 91976784 4022797 complement(2578292..2581480) 1 NC_007958.1 hydrophobe/amphiphile efflux-1 HAE1 2581480 4022797 RPD_2310 Rhodopseudomonas palustris BisB5 hydrophobe/amphiphile efflux-1 HAE1 YP_569443.1 2578292 R 316057 CDS YP_569444.1 91976785 4022798 complement(2581477..2582718) 1 NC_007958.1 secretion protein HlyD 2582718 4022798 RPD_2311 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_569444.1 2581477 R 316057 CDS YP_569445.1 91976786 4022799 complement(2582974..2583729) 1 NC_007958.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 2583729 4022799 RPD_2312 Rhodopseudomonas palustris BisB5 uroporphyrin-III C-methyltransferase YP_569445.1 2582974 R 316057 CDS YP_569446.1 91976787 4022800 complement(2583729..2585090) 1 NC_007958.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 2585090 4022800 RPD_2313 Rhodopseudomonas palustris BisB5 cobyrinic acid a,c-diamide synthase YP_569446.1 2583729 R 316057 CDS YP_569447.1 91976788 4022801 complement(2585077..2585856) 1 NC_007958.1 precorrin-4 C11-methyltransferase 2585856 4022801 RPD_2314 Rhodopseudomonas palustris BisB5 precorrin-4 C11-methyltransferase YP_569447.1 2585077 R 316057 CDS YP_569448.1 91976789 4022802 complement(2585853..2586245) 1 NC_007958.1 cobalamin biosynthesis protein CbiG 2586245 4022802 RPD_2315 Rhodopseudomonas palustris BisB5 cobalamin biosynthesis protein CbiG YP_569448.1 2585853 R 316057 CDS YP_569449.1 91976790 4022803 complement(2586242..2587351) 1 NC_007958.1 precorrin-6y C5,15-methyltransferase subunit CbiE 2587351 4022803 RPD_2316 Rhodopseudomonas palustris BisB5 precorrin-6y C5,15-methyltransferase subunit CbiE YP_569449.1 2586242 R 316057 CDS YP_569450.1 91976791 4022804 2587497..2588246 1 NC_007958.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 2588246 4022804 RPD_2317 Rhodopseudomonas palustris BisB5 cobalt-precorrin-6x reductase YP_569450.1 2587497 D 316057 CDS YP_569451.1 91976792 4022805 complement(2588213..2588974) 1 NC_007958.1 precorrin-3B C17-methyltransferase 2588974 4022805 RPD_2318 Rhodopseudomonas palustris BisB5 precorrin-3B C17-methyltransferase YP_569451.1 2588213 R 316057 CDS YP_569452.1 91976793 4022806 complement(2588971..2589699) 1 NC_007958.1 precorrin-2 C20-methyltransferase 2589699 4022806 RPD_2319 Rhodopseudomonas palustris BisB5 precorrin-2 C20-methyltransferase YP_569452.1 2588971 R 316057 CDS YP_569453.1 91976794 4022807 complement(2589696..2590325) 1 NC_007958.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 2590325 cobH 4022807 cobH Rhodopseudomonas palustris BisB5 precorrin-8X methylmutase YP_569453.1 2589696 R 316057 CDS YP_569454.1 91976795 4022808 complement(2590322..2590909) 1 NC_007958.1 hypothetical protein 2590909 4022808 RPD_2321 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569454.1 2590322 R 316057 CDS YP_569455.1 91976796 4022810 complement(2591366..2592496) 1 NC_007958.1 citrate utilization protein B 2592496 4022810 RPD_2322 Rhodopseudomonas palustris BisB5 citrate utilization protein B YP_569455.1 2591366 R 316057 CDS YP_569456.1 91976797 4022811 complement(2592483..2593781) 1 NC_007958.1 catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase 2593781 4022811 RPD_2323 Rhodopseudomonas palustris BisB5 tricarballylate dehydrogenase YP_569456.1 2592483 R 316057 CDS YP_569457.1 91976798 4022813 2594293..2595405 1 NC_007958.1 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 2595405 4022813 RPD_2324 Rhodopseudomonas palustris BisB5 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_569457.1 2594293 D 316057 CDS YP_569458.1 91976799 4022814 2595402..2596178 1 NC_007958.1 cobalamin 5'-phosphate synthase 2596178 4022814 RPD_2325 Rhodopseudomonas palustris BisB5 cobalamin 5'-phosphate synthase YP_569458.1 2595402 D 316057 CDS YP_569459.1 91976800 4022815 2596247..2597008 1 NC_007958.1 catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 2597008 4022815 RPD_2326 Rhodopseudomonas palustris BisB5 precorrin 6A synthase YP_569459.1 2596247 D 316057 CDS YP_569460.1 91976801 4022816 complement(2597048..2598526) 1 NC_007958.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2598526 4022816 RPD_2327 Rhodopseudomonas palustris BisB5 pyruvate kinase YP_569460.1 2597048 R 316057 CDS YP_569461.1 91976802 4022817 2598754..2599101 1 NC_007958.1 hypothetical protein 2599101 4022817 RPD_2328 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569461.1 2598754 D 316057 CDS YP_569462.1 91976803 4022818 2599330..2600085 1 NC_007958.1 ABC transporter-like protein 2600085 4022818 RPD_2329 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569462.1 2599330 D 316057 CDS YP_569463.1 91976804 4022819 2600078..2600824 1 NC_007958.1 ABC transporter-like protein 2600824 4022819 RPD_2330 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569463.1 2600078 D 316057 CDS YP_569464.1 91976805 4022820 2600864..2601739 1 NC_007958.1 inner-membrane translocator 2601739 4022820 RPD_2331 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_569464.1 2600864 D 316057 CDS YP_569465.1 91976806 4022821 2601741..2602715 1 NC_007958.1 inner-membrane translocator 2602715 4022821 RPD_2332 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_569465.1 2601741 D 316057 CDS YP_569466.1 91976807 4022822 complement(2603101..2605623) 1 NC_007958.1 hypothetical protein 2605623 4022822 RPD_2333 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569466.1 2603101 R 316057 CDS YP_569467.1 91976808 4022823 2606211..2606855 1 NC_007958.1 hypothetical protein 2606855 4022823 RPD_2334 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569467.1 2606211 D 316057 CDS YP_569468.1 91976809 4022824 2606870..2607880 1 NC_007958.1 phosphate transporter 2607880 4022824 RPD_2335 Rhodopseudomonas palustris BisB5 phosphate transporter YP_569468.1 2606870 D 316057 CDS YP_569469.1 91976810 4022825 complement(2608101..2608415) 1 NC_007958.1 small multidrug resistance protein 2608415 4022825 RPD_2336 Rhodopseudomonas palustris BisB5 small multidrug resistance protein YP_569469.1 2608101 R 316057 CDS YP_569470.1 91976811 4022826 2608618..2610243 1 NC_007958.1 peptide chain release factor 3 2610243 4022826 RPD_2337 Rhodopseudomonas palustris BisB5 peptide chain release factor 3 YP_569470.1 2608618 D 316057 CDS YP_569471.1 91976812 4022827 2610357..2610695 1 NC_007958.1 hypothetical protein 2610695 4022827 RPD_2338 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569471.1 2610357 D 316057 CDS YP_569472.1 91976813 4022828 2610904..2612463 1 NC_007958.1 hypothetical protein 2612463 4022828 RPD_2339 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569472.1 2610904 D 316057 CDS YP_569473.1 91976814 4022829 complement(2612477..2612881) 1 NC_007958.1 integral membrane protein 2612881 4022829 RPD_2340 Rhodopseudomonas palustris BisB5 integral membrane protein YP_569473.1 2612477 R 316057 CDS YP_569474.1 91976815 4022830 complement(2612912..2613736) 1 NC_007958.1 NmrA-like 2613736 4022830 RPD_2341 Rhodopseudomonas palustris BisB5 NmrA-like YP_569474.1 2612912 R 316057 CDS YP_569475.1 91976816 4022831 2613835..2614485 1 NC_007958.1 regulatory protein TetR 2614485 4022831 RPD_2342 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_569475.1 2613835 D 316057 CDS YP_569476.1 91976817 4022832 2614703..2615428 1 NC_007958.1 hypothetical protein 2615428 4022832 RPD_2343 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569476.1 2614703 D 316057 CDS YP_569477.1 91976818 4022833 2615672..2617006 1 NC_007958.1 hypothetical protein 2617006 4022833 RPD_2344 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569477.1 2615672 D 316057 CDS YP_569478.1 91976819 4022834 2617018..2618763 1 NC_007958.1 hypothetical protein 2618763 4022834 RPD_2345 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569478.1 2617018 D 316057 CDS YP_569479.1 91976820 4022835 2619049..2621331 1 NC_007958.1 CHASE2 domain-containing protein 2621331 4022835 RPD_2346 Rhodopseudomonas palustris BisB5 CHASE2 domain-containing protein YP_569479.1 2619049 D 316057 CDS YP_569480.1 91976821 4022836 complement(2621445..2622860) 1 NC_007958.1 multi-sensor signal transduction histidine kinase 2622860 4022836 RPD_2347 Rhodopseudomonas palustris BisB5 multi-sensor signal transduction histidine kinase YP_569480.1 2621445 R 316057 CDS YP_569481.1 91976822 4022837 complement(2623195..2623980) 1 NC_007958.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 2623980 hmuV 4022837 hmuV Rhodopseudomonas palustris BisB5 hemin importer ATP-binding subunit YP_569481.1 2623195 R 316057 CDS YP_569482.1 91976823 4022838 complement(2623977..2625062) 1 NC_007958.1 transport system permease 2625062 4022838 RPD_2349 Rhodopseudomonas palustris BisB5 transport system permease YP_569482.1 2623977 R 316057 CDS YP_569483.1 91976824 4022839 complement(2625059..2626030) 1 NC_007958.1 periplasmic binding protein 2626030 4022839 RPD_2350 Rhodopseudomonas palustris BisB5 periplasmic binding protein YP_569483.1 2625059 R 316057 CDS YP_569484.1 91976825 4022840 complement(2626027..2626236) 1 NC_007958.1 hypothetical protein 2626236 4022840 RPD_2351 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569484.1 2626027 R 316057 CDS YP_569485.1 91976826 4022841 2626562..2628004 1 NC_007958.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2628004 4022841 RPD_2352 Rhodopseudomonas palustris BisB5 coproporphyrinogen III oxidase YP_569485.1 2626562 D 316057 CDS YP_569486.1 91976827 4022842 2628066..2628737 1 NC_007958.1 NmrA-like 2628737 4022842 RPD_2353 Rhodopseudomonas palustris BisB5 NmrA-like YP_569486.1 2628066 D 316057 CDS YP_569487.1 91976828 4022843 2628950..2631286 1 NC_007958.1 TonB-dependentheme/hemoglobin receptor 2631286 4022843 RPD_2354 Rhodopseudomonas palustris BisB5 TonB-dependentheme/hemoglobin receptor YP_569487.1 2628950 D 316057 CDS YP_569488.1 91976829 4022844 2631279..2631695 1 NC_007958.1 antibiotic biosynthesis monooxygenase 2631695 4022844 RPD_2355 Rhodopseudomonas palustris BisB5 antibiotic biosynthesis monooxygenase YP_569488.1 2631279 D 316057 CDS YP_569489.1 91976830 4022845 2631716..2632243 1 NC_007958.1 hypothetical protein 2632243 4022845 RPD_2356 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569489.1 2631716 D 316057 CDS YP_569490.1 91976831 4022846 2632236..2633033 1 NC_007958.1 MotA/TolQ/ExbB proton channel 2633033 4022846 RPD_2357 Rhodopseudomonas palustris BisB5 MotA/TolQ/ExbB proton channel YP_569490.1 2632236 D 316057 CDS YP_569491.1 91976832 4022847 2633043..2633480 1 NC_007958.1 biopolymer transport protein ExbD/TolR 2633480 4022847 RPD_2358 Rhodopseudomonas palustris BisB5 biopolymer transport protein ExbD/TolR YP_569491.1 2633043 D 316057 CDS YP_569492.1 91976833 4022848 2633477..2634313 1 NC_007958.1 TonB-like protein 2634313 4022848 RPD_2359 Rhodopseudomonas palustris BisB5 TonB-like protein YP_569492.1 2633477 D 316057 CDS YP_569493.1 91976834 4022849 complement(2634347..2635138) 1 NC_007958.1 regulatory protein IclR 2635138 4022849 RPD_2360 Rhodopseudomonas palustris BisB5 regulatory protein IclR YP_569493.1 2634347 R 316057 CDS YP_569494.1 91976835 4022850 2635313..2636464 1 NC_007958.1 extracellular ligand-binding receptor 2636464 4022850 RPD_2361 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_569494.1 2635313 D 316057 CDS YP_569495.1 91976836 4022851 2636529..2637404 1 NC_007958.1 inner-membrane translocator 2637404 4022851 RPD_2362 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_569495.1 2636529 D 316057 CDS YP_569496.1 91976837 4022852 2637409..2638386 1 NC_007958.1 inner-membrane translocator 2638386 4022852 RPD_2363 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_569496.1 2637409 D 316057 CDS YP_569497.1 91976838 4022853 2638383..2639120 1 NC_007958.1 ABC transporter-like protein 2639120 4022853 RPD_2364 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569497.1 2638383 D 316057 CDS YP_569498.1 91976839 4022854 2639107..2639814 1 NC_007958.1 ABC transporter-like protein 2639814 4022854 RPD_2365 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569498.1 2639107 D 316057 CDS YP_569499.1 91976840 4022855 2639835..2641151 1 NC_007958.1 class III aminotransferase 2641151 4022855 RPD_2366 Rhodopseudomonas palustris BisB5 class III aminotransferase YP_569499.1 2639835 D 316057 CDS YP_569500.1 91976841 4022856 2641306..2642898 1 NC_007958.1 5-oxoprolinase 2642898 4022856 RPD_2367 Rhodopseudomonas palustris BisB5 5-oxoprolinase YP_569500.1 2641306 D 316057 CDS YP_569501.1 91976842 4022857 2642910..2644952 1 NC_007958.1 5-oxoprolinase 2644952 4022857 RPD_2368 Rhodopseudomonas palustris BisB5 5-oxoprolinase YP_569501.1 2642910 D 316057 CDS YP_569502.1 91976843 4022858 complement(2645423..2645779) 1 NC_007958.1 hypothetical protein 2645779 4022858 RPD_2369 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569502.1 2645423 R 316057 CDS YP_569503.1 91976844 4022859 2645785..2647998 1 NC_007958.1 structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellin 2647998 4022859 RPD_2370 Rhodopseudomonas palustris BisB5 flagellin YP_569503.1 2645785 D 316057 CDS YP_569504.1 91976845 4022860 2648071..2648637 1 NC_007958.1 hypothetical protein 2648637 4022860 RPD_2371 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569504.1 2648071 D 316057 CDS YP_569505.1 91976846 4022861 2648768..2649514 1 NC_007958.1 regulatory protein LuxR 2649514 4022861 RPD_2372 Rhodopseudomonas palustris BisB5 regulatory protein LuxR YP_569505.1 2648768 D 316057 CDS YP_569506.1 91976847 4022862 2649869..2650477 1 NC_007958.1 regulatory protein LuxR 2650477 4022862 RPD_2373 Rhodopseudomonas palustris BisB5 regulatory protein LuxR YP_569506.1 2649869 D 316057 CDS YP_569507.1 91976848 4022863 complement(2650805..2651767) 1 NC_007958.1 beta-lactamase-like protein 2651767 4022863 RPD_2374 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_569507.1 2650805 R 316057 CDS YP_569508.1 91976849 4022864 2652083..2652514 1 NC_007958.1 thioredoxin-like protein 2652514 4022864 RPD_2375 Rhodopseudomonas palustris BisB5 thioredoxin-like protein YP_569508.1 2652083 D 316057 CDS YP_569509.1 91976850 4022865 2652637..2653218 1 NC_007958.1 cytochrome c family protein 2653218 4022865 RPD_2376 Rhodopseudomonas palustris BisB5 cytochrome c family protein YP_569509.1 2652637 D 316057 CDS YP_569510.1 91976851 4022866 2653481..2655760 1 NC_007958.1 ATPase-like ATP-binding protein 2655760 4022866 RPD_2377 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_569510.1 2653481 D 316057 CDS YP_569511.1 91976852 4022867 2655841..2657568 1 NC_007958.1 TrkA-N 2657568 4022867 RPD_2378 Rhodopseudomonas palustris BisB5 TrkA-N YP_569511.1 2655841 D 316057 CDS YP_569512.1 91976853 4022869 2658828..2660144 1 NC_007958.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2660144 4022869 RPD_2380 Rhodopseudomonas palustris BisB5 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_569512.1 2658828 D 316057 CDS YP_569513.1 91976854 4022870 2660157..2660531 1 NC_007958.1 hypothetical protein 2660531 4022870 RPD_2381 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569513.1 2660157 D 316057 CDS YP_569514.1 91976855 4022871 2660672..2661145 1 NC_007958.1 thioesterase superfamily protein 2661145 4022871 RPD_2382 Rhodopseudomonas palustris BisB5 thioesterase superfamily protein YP_569514.1 2660672 D 316057 CDS YP_569515.1 91976856 4022872 2662006..2662641 1 NC_007958.1 transcriptional regulator PadR-like 2662641 4022872 RPD_2383 Rhodopseudomonas palustris BisB5 transcriptional regulator PadR-like YP_569515.1 2662006 D 316057 CDS YP_569516.1 91976857 4022873 2662843..2663457 1 NC_007958.1 4-hydroxybenzoyl-CoA thioesterase 2663457 4022873 RPD_2384 Rhodopseudomonas palustris BisB5 4-hydroxybenzoyl-CoA thioesterase YP_569516.1 2662843 D 316057 CDS YP_569517.1 91976858 4022874 2663451..2663720 1 NC_007958.1 hypothetical protein 2663720 4022874 RPD_2385 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569517.1 2663451 D 316057 CDS YP_569518.1 91976859 4022875 2663804..2664289 1 NC_007958.1 hypothetical protein 2664289 4022875 RPD_2386 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569518.1 2663804 D 316057 CDS YP_569519.1 91976860 4022876 2664308..2664772 1 NC_007958.1 hypothetical protein 2664772 4022876 RPD_2387 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569519.1 2664308 D 316057 CDS YP_569520.1 91976861 4022877 complement(2664778..2665167) 1 NC_007958.1 hypothetical protein 2665167 4022877 RPD_2388 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569520.1 2664778 R 316057 CDS YP_569521.1 91976862 4022878 2665335..2667182 1 NC_007958.1 ABC transporter-like protein 2667182 4022878 RPD_2389 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569521.1 2665335 D 316057 CDS YP_569522.1 91976863 4022879 complement(2667247..2667507) 1 NC_007958.1 hypothetical protein 2667507 4022879 RPD_2390 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569522.1 2667247 R 316057 CDS YP_569523.1 91976864 4022880 2668063..2668218 1 NC_007958.1 antenna complex subunit alpha/beta 2668218 4022880 RPD_2391 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_569523.1 2668063 D 316057 CDS YP_569524.1 91976865 4022881 2668231..2668428 1 NC_007958.1 antenna complex subunit alpha/beta 2668428 4022881 RPD_2392 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_569524.1 2668231 D 316057 CDS YP_569525.1 91976866 4022882 2668723..2669241 1 NC_007958.1 response regulator receiver 2669241 4022882 RPD_2393 Rhodopseudomonas palustris BisB5 response regulator receiver YP_569525.1 2668723 D 316057 CDS YP_569526.1 91976867 4022884 complement(2669839..2670276) 1 NC_007958.1 hypothetical protein 2670276 4022884 RPD_2395 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569526.1 2669839 R 316057 CDS YP_569527.1 91976868 4022885 complement(2670336..2670626) 1 NC_007958.1 hypothetical protein 2670626 4022885 RPD_2396 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569527.1 2670336 R 316057 CDS YP_569528.1 91976869 4022886 complement(2670638..2671300) 1 NC_007958.1 hypothetical protein 2671300 4022886 RPD_2397 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569528.1 2670638 R 316057 CDS YP_569529.1 91976870 4022887 complement(2671319..2672746) 1 NC_007958.1 PUCC protein 2672746 4022887 RPD_2398 Rhodopseudomonas palustris BisB5 PUCC protein YP_569529.1 2671319 R 316057 CDS YP_569530.1 91976871 4022888 complement(2672936..2673115) 1 NC_007958.1 antenna complex subunit alpha/beta 2673115 4022888 RPD_2399 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_569530.1 2672936 R 316057 CDS YP_569531.1 91976872 4022889 complement(2673128..2673283) 1 NC_007958.1 antenna complex subunit alpha/beta 2673283 4022889 RPD_2400 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_569531.1 2673128 R 316057 CDS YP_569532.1 91976873 4022890 2673759..2674451 1 NC_007958.1 response regulator receiver 2674451 4022890 RPD_2401 Rhodopseudomonas palustris BisB5 response regulator receiver YP_569532.1 2673759 D 316057 CDS YP_569533.1 91976874 4022891 2674682..2676970 1 NC_007958.1 ATPase-like ATP-binding protein 2676970 4022891 RPD_2402 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_569533.1 2674682 D 316057 CDS YP_569534.1 91976875 4022892 2676970..2679300 1 NC_007958.1 ATPase-like ATP-binding protein 2679300 4022892 RPD_2403 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_569534.1 2676970 D 316057 CDS YP_569535.1 91976876 4022893 2679297..2679761 1 NC_007958.1 response regulator receiver 2679761 4022893 RPD_2404 Rhodopseudomonas palustris BisB5 response regulator receiver YP_569535.1 2679297 D 316057 CDS YP_569536.1 91976877 4022894 2679758..2680888 1 NC_007958.1 response regulator receiver sensor signal transduction histidine kinase 2680888 4022894 RPD_2405 Rhodopseudomonas palustris BisB5 response regulator receiver sensor signal transduction histidine kinase YP_569536.1 2679758 D 316057 CDS YP_569537.1 91976878 4022896 2681932..2682924 1 NC_007958.1 helix-turn-helix, AraC type 2682924 4022896 RPD_2406 Rhodopseudomonas palustris BisB5 helix-turn-helix, AraC type YP_569537.1 2681932 D 316057 CDS YP_569538.1 91976879 4022897 2683019..2683867 1 NC_007958.1 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 2683867 4022897 RPD_2407 Rhodopseudomonas palustris BisB5 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_569538.1 2683019 D 316057 CDS YP_569539.1 91976880 4022898 2683875..2684768 1 NC_007958.1 ADP-ribosyl-(dinitrogen reductase) hydrolase 2684768 4022898 RPD_2408 Rhodopseudomonas palustris BisB5 ADP-ribosyl-(dinitrogen reductase) hydrolase YP_569539.1 2683875 D 316057 CDS YP_569540.1 91976881 4022899 2685312..2685677 1 NC_007958.1 hypothetical protein 2685677 4022899 RPD_2409 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569540.1 2685312 D 316057 CDS YP_569541.1 91976882 4022900 complement(2685758..2686033) 1 NC_007958.1 type IV pilus assembly PilZ 2686033 4022900 RPD_2410 Rhodopseudomonas palustris BisB5 type IV pilus assembly PilZ YP_569541.1 2685758 R 316057 CDS YP_569542.1 91976883 4022901 complement(2686104..2686445) 1 NC_007958.1 hypothetical protein 2686445 4022901 RPD_2411 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569542.1 2686104 R 316057 CDS YP_569543.1 91976884 4022902 complement(2686829..2687251) 1 NC_007958.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 2687251 4022902 RPD_2412 Rhodopseudomonas palustris BisB5 nickel responsive regulator YP_569543.1 2686829 R 316057 CDS YP_569544.1 91976885 4022903 2687454..2689610 1 NC_007958.1 TonB-dependent receptor, plug 2689610 4022903 RPD_2413 Rhodopseudomonas palustris BisB5 TonB-dependent receptor, plug YP_569544.1 2687454 D 316057 CDS YP_569545.1 91976886 4022905 2690623..2692071 1 NC_007958.1 putative Omp2b porin 2692071 4022905 RPD_2414 Rhodopseudomonas palustris BisB5 putative Omp2b porin YP_569545.1 2690623 D 316057 CDS YP_569546.1 91976887 4022906 complement(2692364..2694604) 1 NC_007958.1 lytic transglycosylase 2694604 4022906 RPD_2415 Rhodopseudomonas palustris BisB5 lytic transglycosylase YP_569546.1 2692364 R 316057 CDS YP_569547.1 91976888 4022907 2694869..2695768 1 NC_007958.1 hypothetical protein 2695768 4022907 RPD_2416 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569547.1 2694869 D 316057 CDS YP_569548.1 91976889 4022908 complement(2695829..2696500) 1 NC_007958.1 hypothetical protein 2696500 4022908 RPD_2417 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569548.1 2695829 R 316057 CDS YP_569549.1 91976890 4022909 2696737..2697159 1 NC_007958.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 2697159 4022909 RPD_2418 Rhodopseudomonas palustris BisB5 NADH dehydrogenase YP_569549.1 2696737 D 316057 CDS YP_569550.1 91976891 4022910 complement(2697208..2698560) 1 NC_007958.1 agarase 2698560 4022910 RPD_2419 Rhodopseudomonas palustris BisB5 agarase YP_569550.1 2697208 R 316057 CDS YP_569551.1 91976892 4022911 complement(2698658..2699602) 1 NC_007958.1 alpha/beta hydrolase fold-3 protein 2699602 4022911 RPD_2420 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold-3 protein YP_569551.1 2698658 R 316057 CDS YP_569552.1 91976893 4022912 complement(2699654..2700433) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 2700433 4022912 RPD_2421 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_569552.1 2699654 R 316057 CDS YP_569553.1 91976894 4022913 2700668..2701618 1 NC_007958.1 hypothetical protein 2701618 4022913 RPD_2422 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569553.1 2700668 D 316057 CDS YP_569554.1 91976895 4022914 complement(2701740..2702906) 1 NC_007958.1 peptidase S1 and S6, chymotrypsin/Hap 2702906 4022914 RPD_2423 Rhodopseudomonas palustris BisB5 peptidase S1 and S6, chymotrypsin/Hap YP_569554.1 2701740 R 316057 CDS YP_569555.1 91976896 4022915 complement(2703067..2703387) 1 NC_007958.1 hypothetical protein 2703387 4022915 RPD_2424 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569555.1 2703067 R 316057 CDS YP_569556.1 91976897 4022916 complement(2703509..2704183) 1 NC_007958.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2704183 aat 4022916 aat Rhodopseudomonas palustris BisB5 leucyl/phenylalanyl-tRNA--protein transferase YP_569556.1 2703509 R 316057 CDS YP_569557.1 91976898 4022917 complement(2704263..2705483) 1 NC_007958.1 hypothetical protein 2705483 4022917 RPD_2426 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569557.1 2704263 R 316057 CDS YP_569558.1 91976899 4022918 complement(2705713..2706384) 1 NC_007958.1 hypothetical protein 2706384 4022918 RPD_2427 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569558.1 2705713 R 316057 CDS YP_569559.1 91976900 4022919 complement(2706397..2707479) 1 NC_007958.1 signal transduction histidine kinase 2707479 4022919 RPD_2428 Rhodopseudomonas palustris BisB5 signal transduction histidine kinase YP_569559.1 2706397 R 316057 CDS YP_569560.1 91976901 4022920 complement(2707476..2707919) 1 NC_007958.1 response regulator receiver 2707919 4022920 RPD_2429 Rhodopseudomonas palustris BisB5 response regulator receiver YP_569560.1 2707476 R 316057 CDS YP_569561.1 91976902 4022921 complement(2707916..2709448) 1 NC_007958.1 multi-sensor signal transduction histidine kinase 2709448 4022921 RPD_2430 Rhodopseudomonas palustris BisB5 multi-sensor signal transduction histidine kinase YP_569561.1 2707916 R 316057 CDS YP_569562.1 91976903 4022922 complement(2709561..2710916) 1 NC_007958.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 2710916 4022922 RPD_2431 Rhodopseudomonas palustris BisB5 acetyl-CoA carboxylase biotin carboxylase subunit YP_569562.1 2709561 R 316057 CDS YP_569563.1 91976904 4022923 complement(2711025..2711537) 1 NC_007958.1 acetyl-CoA carboxylase, biotin carboxyl carrier protein 2711537 4022923 RPD_2432 Rhodopseudomonas palustris BisB5 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_569563.1 2711025 R 316057 CDS YP_569564.1 91976905 4022924 complement(2711575..2712045) 1 NC_007958.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2712045 4022924 RPD_2433 Rhodopseudomonas palustris BisB5 3-dehydroquinate dehydratase YP_569564.1 2711575 R 316057 CDS YP_569565.1 91976906 4022925 complement(2712359..2713075) 1 NC_007958.1 hypothetical protein 2713075 4022925 RPD_2434 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569565.1 2712359 R 316057 CDS YP_569566.1 91976907 4022926 2713337..2713549 1 NC_007958.1 hypothetical protein 2713549 4022926 RPD_2435 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569566.1 2713337 D 316057 CDS YP_569567.1 91976908 4022927 complement(2713681..2714448) 1 NC_007958.1 DSBA oxidoreductase 2714448 4022927 RPD_2436 Rhodopseudomonas palustris BisB5 DSBA oxidoreductase YP_569567.1 2713681 R 316057 CDS YP_569568.1 91976909 4022928 complement(2714667..2715296) 1 NC_007958.1 peroxidase 2715296 4022928 RPD_2437 Rhodopseudomonas palustris BisB5 peroxidase YP_569568.1 2714667 R 316057 CDS YP_569569.1 91976910 4022929 complement(2715527..2715901) 1 NC_007958.1 hypothetical protein 2715901 4022929 RPD_2438 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569569.1 2715527 R 316057 CDS YP_569570.1 91976911 4022930 complement(2716058..2717485) 1 NC_007958.1 peptidase M48, Ste24p 2717485 4022930 RPD_2439 Rhodopseudomonas palustris BisB5 peptidase M48, Ste24p YP_569570.1 2716058 R 316057 CDS YP_569571.1 91976912 4022931 2717593..2718792 1 NC_007958.1 class I and II aminotransferase 2718792 4022931 RPD_2440 Rhodopseudomonas palustris BisB5 class I and II aminotransferase YP_569571.1 2717593 D 316057 CDS YP_569572.1 91976913 4022932 2719311..2720648 1 NC_007958.1 sodium:dicarboxylate symporter 2720648 4022932 RPD_2441 Rhodopseudomonas palustris BisB5 sodium:dicarboxylate symporter YP_569572.1 2719311 D 316057 CDS YP_569573.1 91976914 4022933 complement(2720723..2723854) 1 NC_007958.1 ribonuclease 2723854 4022933 RPD_2442 Rhodopseudomonas palustris BisB5 ribonuclease YP_569573.1 2720723 R 316057 CDS YP_569574.1 91976915 4022934 2724526..2725851 1 NC_007958.1 N-acetylmuramoyl-L-alanine amidase 2725851 4022934 RPD_2443 Rhodopseudomonas palustris BisB5 N-acetylmuramoyl-L-alanine amidase YP_569574.1 2724526 D 316057 CDS YP_569575.1 91976916 4022935 2726062..2728554 1 NC_007958.1 penicillin-binding protein 1A 2728554 4022935 RPD_2444 Rhodopseudomonas palustris BisB5 penicillin-binding protein 1A YP_569575.1 2726062 D 316057 CDS YP_569576.1 91976917 4022936 2728822..2729790 1 NC_007958.1 peptide chain release factor 2 2729790 4022936 RPD_2445 Rhodopseudomonas palustris BisB5 peptide chain release factor 2 YP_569576.1 2728822 D 316057 CDS YP_569577.1 91976918 4022937 complement(2729787..2730368) 1 NC_007958.1 hypothetical protein 2730368 4022937 RPD_2446 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569577.1 2729787 R 316057 CDS YP_569578.1 91976919 4022938 complement(2730459..2731838) 1 NC_007958.1 peptidase M23B 2731838 4022938 RPD_2447 Rhodopseudomonas palustris BisB5 peptidase M23B YP_569578.1 2730459 R 316057 CDS YP_569579.1 91976920 4022939 complement(2731927..2732589) 1 NC_007958.1 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2732589 4022939 RPD_2448 Rhodopseudomonas palustris BisB5 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_569579.1 2731927 R 316057 CDS YP_569580.1 91976921 4022940 2732778..2736509 1 NC_007958.1 hypothetical protein 2736509 4022940 RPD_2449 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569580.1 2732778 D 316057 CDS YP_569581.1 91976922 4022941 complement(2736533..2737099) 1 NC_007958.1 cytochrome B561 2737099 4022941 RPD_2450 Rhodopseudomonas palustris BisB5 cytochrome B561 YP_569581.1 2736533 R 316057 CDS YP_569582.1 91976923 4022942 complement(2737332..2738585) 1 NC_007958.1 major facilitator transporter 2738585 4022942 RPD_2451 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_569582.1 2737332 R 316057 CDS YP_569583.1 91976924 4022943 complement(2738631..2739887) 1 NC_007958.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2739887 4022943 RPD_2452 Rhodopseudomonas palustris BisB5 tyrosyl-tRNA synthetase YP_569583.1 2738631 R 316057 CDS YP_569584.1 91976925 4022944 2740041..2741144 1 NC_007958.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2741144 anmK 4022944 anmK Rhodopseudomonas palustris BisB5 anhydro-N-acetylmuramic acid kinase YP_569584.1 2740041 D 316057 CDS YP_569585.1 91976926 4022945 complement(2741245..2741892) 1 NC_007958.1 hypothetical protein 2741892 4022945 RPD_2454 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569585.1 2741245 R 316057 CDS YP_569586.1 91976927 4022946 2742131..2743303 1 NC_007958.1 class V aminotransferase 2743303 4022946 RPD_2455 Rhodopseudomonas palustris BisB5 class V aminotransferase YP_569586.1 2742131 D 316057 CDS YP_569587.1 91976928 4022947 2743386..2744867 1 NC_007958.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2744867 4022947 RPD_2456 Rhodopseudomonas palustris BisB5 cysteine desulfurase activator complex subunit SufB YP_569587.1 2743386 D 316057 CDS YP_569588.1 91976929 4022948 2745000..2745758 1 NC_007958.1 FeS assembly ATPase SufC 2745758 4022948 RPD_2457 Rhodopseudomonas palustris BisB5 FeS assembly ATPase SufC YP_569588.1 2745000 D 316057 CDS YP_569589.1 91976930 4022949 2745779..2747092 1 NC_007958.1 FeS assembly protein SufD 2747092 4022949 RPD_2458 Rhodopseudomonas palustris BisB5 FeS assembly protein SufD YP_569589.1 2745779 D 316057 CDS YP_569590.1 91976931 4022950 2747089..2748336 1 NC_007958.1 SufS subfamily cysteine desulfurase 2748336 4022950 RPD_2459 Rhodopseudomonas palustris BisB5 SufS subfamily cysteine desulfurase YP_569590.1 2747089 D 316057 CDS YP_569591.1 91976932 4022951 2748333..2748701 1 NC_007958.1 hypothetical protein 2748701 4022951 RPD_2460 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569591.1 2748333 D 316057 CDS YP_569592.1 91976933 4022952 2748802..2749206 1 NC_007958.1 FeS assembly scaffold SufA 2749206 4022952 RPD_2461 Rhodopseudomonas palustris BisB5 FeS assembly scaffold SufA YP_569592.1 2748802 D 316057 CDS YP_569593.1 91976934 4022953 complement(2749236..2750303) 1 NC_007958.1 GGDEF domain-containing protein 2750303 4022953 RPD_2462 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_569593.1 2749236 R 316057 CDS YP_569594.1 91976935 4022954 complement(2750409..2751911) 1 NC_007958.1 DEAD/DEAH box helicase-like protein 2751911 4022954 RPD_2463 Rhodopseudomonas palustris BisB5 DEAD/DEAH box helicase-like protein YP_569594.1 2750409 R 316057 CDS YP_569595.1 91976936 4022955 complement(2752273..2753262) 1 NC_007958.1 helix-turn-helix, AraC type 2753262 4022955 RPD_2464 Rhodopseudomonas palustris BisB5 helix-turn-helix, AraC type YP_569595.1 2752273 R 316057 CDS YP_569596.1 91976937 4022956 2753592..2755277 1 NC_007958.1 chemotaxis sensory transducer 2755277 4022956 RPD_2465 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_569596.1 2753592 D 316057 CDS YP_569597.1 91976938 4022957 2755528..2757021 1 NC_007958.1 peptidase C14, caspase catalytic subunit p20 2757021 4022957 RPD_2466 Rhodopseudomonas palustris BisB5 peptidase C14, caspase catalytic subunit p20 YP_569597.1 2755528 D 316057 CDS YP_569598.1 91976939 4022958 2757135..2757857 1 NC_007958.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 2757857 4022958 RPD_2467 Rhodopseudomonas palustris BisB5 aquaporin Z YP_569598.1 2757135 D 316057 CDS YP_569599.1 91976940 4022959 complement(2758068..2759957) 1 NC_007958.1 peptidase C14, caspase catalytic subunit p20 2759957 4022959 RPD_2468 Rhodopseudomonas palustris BisB5 peptidase C14, caspase catalytic subunit p20 YP_569599.1 2758068 R 316057 CDS YP_569600.1 91976941 4022960 2760124..2760588 1 NC_007958.1 hypothetical protein 2760588 4022960 RPD_2469 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569600.1 2760124 D 316057 CDS YP_569601.1 91976942 4022961 2760826..2761593 1 NC_007958.1 hypothetical protein 2761593 4022961 RPD_2470 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569601.1 2760826 D 316057 CDS YP_569602.1 91976943 4022962 2761870..2762778 1 NC_007958.1 dienelactone hydrolase 2762778 4022962 RPD_2471 Rhodopseudomonas palustris BisB5 dienelactone hydrolase YP_569602.1 2761870 D 316057 CDS YP_569603.1 91976944 4022963 complement(2762857..2763045) 1 NC_007958.1 hypothetical protein 2763045 4022963 RPD_2472 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569603.1 2762857 R 316057 CDS YP_569604.1 91976945 4022964 complement(2763150..2764187) 1 NC_007958.1 LysR, substrate-binding 2764187 4022964 RPD_2473 Rhodopseudomonas palustris BisB5 LysR, substrate-binding YP_569604.1 2763150 R 316057 CDS YP_569605.1 91976946 4022965 2764302..2765915 1 NC_007958.1 gamma-glutamyltransferase 2765915 4022965 RPD_2474 Rhodopseudomonas palustris BisB5 gamma-glutamyltransferase YP_569605.1 2764302 D 316057 CDS YP_569606.1 91976947 4022966 2765956..2767173 1 NC_007958.1 ABC-type branched-chain amino acid transport systems, periplasmic component 2767173 4022966 RPD_2475 Rhodopseudomonas palustris BisB5 ABC-type branched-chain amino acid transport systems, periplasmic component YP_569606.1 2765956 D 316057 CDS YP_569607.1 91976948 4022967 complement(2767349..2768140) 1 NC_007958.1 molybdate transport repressor 2768140 4022967 RPD_2476 Rhodopseudomonas palustris BisB5 molybdate transport repressor YP_569607.1 2767349 R 316057 CDS YP_569608.1 91976949 4022968 complement(2768338..2768961) 1 NC_007958.1 hypothetical protein 2768961 4022968 RPD_2477 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569608.1 2768338 R 316057 CDS YP_569609.1 91976950 4022969 complement(2768965..2769765) 1 NC_007958.1 ABC transporter-like protein 2769765 4022969 RPD_2478 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569609.1 2768965 R 316057 CDS YP_569610.1 91976951 4022970 complement(2769762..2770784) 1 NC_007958.1 transport system permease 2770784 4022970 RPD_2479 Rhodopseudomonas palustris BisB5 transport system permease YP_569610.1 2769762 R 316057 CDS YP_569611.1 91976952 4022971 complement(2770786..2771838) 1 NC_007958.1 periplasmic binding protein 2771838 4022971 RPD_2480 Rhodopseudomonas palustris BisB5 periplasmic binding protein YP_569611.1 2770786 R 316057 CDS YP_569612.1 91976953 4022972 complement(2771841..2772389) 1 NC_007958.1 hypothetical protein 2772389 4022972 RPD_2481 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569612.1 2771841 R 316057 CDS YP_569613.1 91976954 4022973 2772908..2775094 1 NC_007958.1 TonB-dependent receptor 2775094 4022973 RPD_2482 Rhodopseudomonas palustris BisB5 TonB-dependent receptor YP_569613.1 2772908 D 316057 CDS YP_569614.1 91976955 4022974 2775186..2775458 1 NC_007958.1 hypothetical protein 2775458 4022974 RPD_2483 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569614.1 2775186 D 316057 CDS YP_569615.1 91976956 4022975 complement(2775572..2777626) 1 NC_007958.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2777626 4022975 RPD_2484 Rhodopseudomonas palustris BisB5 DNA topoisomerase IV subunit B YP_569615.1 2775572 R 316057 CDS YP_569616.1 91976957 4022976 2778089..2778619 1 NC_007958.1 DedA family integral membrane protein 2778619 4022976 RPD_2485 Rhodopseudomonas palustris BisB5 DedA family integral membrane protein YP_569616.1 2778089 D 316057 CDS YP_569617.1 91976958 4022977 2778753..2779745 1 NC_007958.1 twin-arginine translocation pathway signal 2779745 4022977 RPD_2486 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_569617.1 2778753 D 316057 CDS YP_569618.1 91976959 4022978 2780077..2780745 1 NC_007958.1 negative transcriptional regulator 2780745 4022978 RPD_2487 Rhodopseudomonas palustris BisB5 negative transcriptional regulator YP_569618.1 2780077 D 316057 CDS YP_569619.1 91976960 4022979 2780757..2781752 1 NC_007958.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 2781752 4022979 RPD_2488 Rhodopseudomonas palustris BisB5 N-acetyl-gamma-glutamyl-phosphate reductase YP_569619.1 2780757 D 316057 CDS YP_569620.1 91976961 4022980 2781861..2782463 1 NC_007958.1 type 11 methyltransferase 2782463 4022980 RPD_2489 Rhodopseudomonas palustris BisB5 type 11 methyltransferase YP_569620.1 2781861 D 316057 CDS YP_569621.1 91976962 4022981 2782724..2784541 1 NC_007958.1 radical SAM family protein 2784541 4022981 RPD_2490 Rhodopseudomonas palustris BisB5 radical SAM family protein YP_569621.1 2782724 D 316057 CDS YP_569622.1 91976963 4022982 2784770..2785132 1 NC_007958.1 hypothetical protein 2785132 4022982 RPD_2491 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569622.1 2784770 D 316057 CDS YP_569623.1 91976964 4022983 complement(2785143..2787011) 1 NC_007958.1 Poly(R)-hydroxyalkanoic acid synthase, class I 2787011 4022983 RPD_2492 Rhodopseudomonas palustris BisB5 Poly(R)-hydroxyalkanoic acid synthase, class I YP_569623.1 2785143 R 316057 CDS YP_569624.1 91976965 4022984 2787252..2787602 1 NC_007958.1 hypothetical protein 2787602 4022984 RPD_2493 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569624.1 2787252 D 316057 CDS YP_569625.1 91976966 4022985 2787788..2789008 1 NC_007958.1 aminotransferase 2789008 4022985 RPD_2494 Rhodopseudomonas palustris BisB5 aminotransferase YP_569625.1 2787788 D 316057 CDS YP_569626.1 91976967 4022986 2789084..2790403 1 NC_007958.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2790403 4022986 RPD_2495 Rhodopseudomonas palustris BisB5 homoserine dehydrogenase YP_569626.1 2789084 D 316057 CDS YP_569627.1 91976968 4022987 2790468..2791472 1 NC_007958.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2791472 glpX 4022987 glpX Rhodopseudomonas palustris BisB5 fructose 1,6-bisphosphatase II YP_569627.1 2790468 D 316057 CDS YP_569628.1 91976969 4022988 2791584..2792027 1 NC_007958.1 GCN5-like N-acetyltransferase 2792027 4022988 RPD_2497 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_569628.1 2791584 D 316057 CDS YP_569629.1 91976970 4022989 2792159..2792887 1 NC_007958.1 haloacid dehalogenase, type II 2792887 4022989 RPD_2498 Rhodopseudomonas palustris BisB5 haloacid dehalogenase, type II YP_569629.1 2792159 D 316057 CDS YP_569630.1 91976971 4022990 2793058..2794959 1 NC_007958.1 single-stranded-DNA-specific exonuclease RecJ 2794959 4022990 RPD_2499 Rhodopseudomonas palustris BisB5 single-stranded-DNA-specific exonuclease RecJ YP_569630.1 2793058 D 316057 CDS YP_569631.1 91976972 4022991 complement(2795088..2795396) 1 NC_007958.1 hypothetical protein 2795396 4022991 RPD_2500 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569631.1 2795088 R 316057 CDS YP_569632.1 91976973 4022992 complement(2795473..2796588) 1 NC_007958.1 hypothetical protein 2796588 4022992 RPD_2501 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569632.1 2795473 R 316057 CDS YP_569633.1 91976974 4022993 complement(2796599..2797825) 1 NC_007958.1 lytic murein transglycosylase 2797825 4022993 RPD_2502 Rhodopseudomonas palustris BisB5 lytic murein transglycosylase YP_569633.1 2796599 R 316057 CDS YP_569634.1 91976975 4022994 complement(2797924..2799552) 1 NC_007958.1 peptidase M23B 2799552 4022994 RPD_2503 Rhodopseudomonas palustris BisB5 peptidase M23B YP_569634.1 2797924 R 316057 CDS YP_569635.1 91976976 4022995 complement(2799710..2800276) 1 NC_007958.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2800276 4022995 RPD_2504 Rhodopseudomonas palustris BisB5 elongation factor P YP_569635.1 2799710 R 316057 CDS YP_569636.1 91976977 4022996 2800417..2801472 1 NC_007958.1 lysine--tRNA ligase 2801472 4022996 RPD_2505 Rhodopseudomonas palustris BisB5 lysine--tRNA ligase YP_569636.1 2800417 D 316057 CDS YP_569637.1 91976978 4022997 2801469..2802560 1 NC_007958.1 hypothetical protein 2802560 4022997 RPD_2506 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569637.1 2801469 D 316057 CDS YP_569638.1 91976979 4022998 2802780..2803097 1 NC_007958.1 hypothetical protein 2803097 4022998 RPD_2507 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569638.1 2802780 D 316057 CDS YP_569639.1 91976980 4022999 complement(2803126..2803701) 1 NC_007958.1 hypothetical protein 2803701 4022999 RPD_2508 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569639.1 2803126 R 316057 CDS YP_569640.1 91976981 4023000 2804281..2804517 1 NC_007958.1 hypothetical protein 2804517 4023000 RPD_2509 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569640.1 2804281 D 316057 CDS YP_569641.1 91976982 4023001 2804747..2805121 1 NC_007958.1 response regulator receiver 2805121 4023001 RPD_2510 Rhodopseudomonas palustris BisB5 response regulator receiver YP_569641.1 2804747 D 316057 CDS YP_569642.1 91976983 4023002 2805336..2806154 1 NC_007958.1 methyltransferase FkbM 2806154 4023002 RPD_2511 Rhodopseudomonas palustris BisB5 methyltransferase FkbM YP_569642.1 2805336 D 316057 CDS YP_569643.1 91976984 4023003 complement(2806850..2809909) 1 NC_007958.1 outer membrane autotransporter barrel domain-containing protein 2809909 4023003 RPD_2512 Rhodopseudomonas palustris BisB5 outer membrane autotransporter barrel domain-containing protein YP_569643.1 2806850 R 316057 CDS YP_569644.1 91976985 4023004 2810300..2813137 1 NC_007958.1 ATPase-like ATP-binding protein 2813137 4023004 RPD_2513 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_569644.1 2810300 D 316057 CDS YP_569645.1 91976986 4023005 complement(2813110..2813808) 1 NC_007958.1 response regulator receiver 2813808 4023005 RPD_2514 Rhodopseudomonas palustris BisB5 response regulator receiver YP_569645.1 2813110 R 316057 CDS YP_569646.1 91976987 4023006 complement(2814355..2815050) 1 NC_007958.1 cyclic nucleotide-binding protein 2815050 4023006 RPD_2515 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_569646.1 2814355 R 316057 CDS YP_569647.1 91976988 4023007 2815177..2817564 1 NC_007958.1 sulfatase 2817564 4023007 RPD_2516 Rhodopseudomonas palustris BisB5 sulfatase YP_569647.1 2815177 D 316057 CDS YP_569648.1 91976989 4023008 2817595..2817957 1 NC_007958.1 hypothetical protein 2817957 4023008 RPD_2517 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569648.1 2817595 D 316057 CDS YP_569649.1 91976990 4023009 2818130..2819269 1 NC_007958.1 secretion protein HlyD 2819269 4023009 RPD_2518 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_569649.1 2818130 D 316057 CDS YP_569650.1 91976991 4023010 2819409..2819696 1 NC_007958.1 AraC family regulator 2819696 4023010 RPD_2519 Rhodopseudomonas palustris BisB5 AraC family regulator YP_569650.1 2819409 D 316057 CDS YP_569651.1 91976992 4023011 complement(2819709..2821154) 1 NC_007958.1 lytic transglycosylase 2821154 4023011 RPD_2520 Rhodopseudomonas palustris BisB5 lytic transglycosylase YP_569651.1 2819709 R 316057 CDS YP_569652.1 91976993 4023012 2821375..2821719 1 NC_007958.1 hypothetical protein 2821719 4023012 RPD_2521 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569652.1 2821375 D 316057 CDS YP_569653.1 91976994 4023013 2821921..2824290 1 NC_007958.1 sulfatase 2824290 4023013 RPD_2522 Rhodopseudomonas palustris BisB5 sulfatase YP_569653.1 2821921 D 316057 CDS YP_569654.1 91976995 4023014 2824386..2824841 1 NC_007958.1 hypothetical protein 2824841 4023014 RPD_2523 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569654.1 2824386 D 316057 CDS YP_569655.1 91976996 4023015 2824957..2825835 1 NC_007958.1 hypothetical protein 2825835 4023015 RPD_2524 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569655.1 2824957 D 316057 CDS YP_569656.1 91976997 4023016 2825855..2826472 1 NC_007958.1 invasion associated locus B 2826472 4023016 RPD_2525 Rhodopseudomonas palustris BisB5 invasion associated locus B YP_569656.1 2825855 D 316057 CDS YP_569657.1 91976998 4023017 2826482..2828836 1 NC_007958.1 hypothetical protein 2828836 4023017 RPD_2526 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569657.1 2826482 D 316057 CDS YP_569658.1 91976999 4023019 2829571..2829828 1 NC_007958.1 hypothetical protein 2829828 4023019 RPD_2527 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569658.1 2829571 D 316057 CDS YP_569659.1 91977000 4023020 complement(2830201..2830650) 1 NC_007958.1 glyoxalase/bleomycin resistance protein/dioxygenase 2830650 4023020 RPD_2528 Rhodopseudomonas palustris BisB5 glyoxalase/bleomycin resistance protein/dioxygenase YP_569659.1 2830201 R 316057 CDS YP_569660.1 91977001 4023021 2831192..2831953 1 NC_007958.1 silent information regulator protein Sir2 2831953 4023021 RPD_2529 Rhodopseudomonas palustris BisB5 silent information regulator protein Sir2 YP_569660.1 2831192 D 316057 CDS YP_569661.1 91977002 4023022 2832178..2832837 1 NC_007958.1 cold-shock DNA-binding domain-containing protein 2832837 4023022 RPD_2530 Rhodopseudomonas palustris BisB5 cold-shock DNA-binding domain-containing protein YP_569661.1 2832178 D 316057 CDS YP_569662.1 91977003 4023023 2833154..2833633 1 NC_007958.1 hypothetical protein 2833633 4023023 RPD_2531 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569662.1 2833154 D 316057 CDS YP_569663.1 91977004 4023025 complement(2833825..2835108) 1 NC_007958.1 putative OpgC protein 2835108 4023025 RPD_2532 Rhodopseudomonas palustris BisB5 putative OpgC protein YP_569663.1 2833825 R 316057 CDS YP_569664.1 91977005 4023026 2835374..2835679 1 NC_007958.1 ETC complex I subunit region 2835679 4023026 RPD_2533 Rhodopseudomonas palustris BisB5 ETC complex I subunit region YP_569664.1 2835374 D 316057 CDS YP_569665.1 91977006 4023027 2835924..2837528 1 NC_007958.1 propionyl-CoA carboxylase 2837528 4023027 RPD_2534 Rhodopseudomonas palustris BisB5 propionyl-CoA carboxylase YP_569665.1 2835924 D 316057 CDS YP_569666.1 91977007 4023028 2837528..2839543 1 NC_007958.1 carbamoyl-phosphate synthase L chain, ATP-binding 2839543 4023028 RPD_2535 Rhodopseudomonas palustris BisB5 carbamoyl-phosphate synthase L chain, ATP-binding YP_569666.1 2837528 D 316057 CDS YP_569667.1 91977008 4023029 2839551..2840471 1 NC_007958.1 pyruvate carboxyltransferase 2840471 4023029 RPD_2536 Rhodopseudomonas palustris BisB5 pyruvate carboxyltransferase YP_569667.1 2839551 D 316057 CDS YP_569668.1 91977009 4023030 complement(2840566..2840823) 1 NC_007958.1 hypothetical protein 2840823 4023030 RPD_2537 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569668.1 2840566 R 316057 CDS YP_569669.1 91977010 4023031 2840899..2841135 1 NC_007958.1 hypothetical protein 2841135 4023031 RPD_2538 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569669.1 2840899 D 316057 CDS YP_569670.1 91977011 4023032 complement(2841199..2841549) 1 NC_007958.1 hypothetical protein 2841549 4023032 RPD_2539 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569670.1 2841199 R 316057 CDS YP_569671.1 91977012 4023033 2841746..2842210 1 NC_007958.1 peptidylprolyl isomerase 2842210 4023033 RPD_2540 Rhodopseudomonas palustris BisB5 peptidylprolyl isomerase YP_569671.1 2841746 D 316057 CDS YP_569672.1 91977013 4023034 complement(2842268..2842600) 1 NC_007958.1 hypothetical protein 2842600 4023034 RPD_2541 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569672.1 2842268 R 316057 CDS YP_569673.1 91977014 4023035 2842827..2843630 1 NC_007958.1 hypothetical protein 2843630 4023035 RPD_2542 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569673.1 2842827 D 316057 CDS YP_569674.1 91977015 4023036 2843627..2844106 1 NC_007958.1 hypothetical protein 2844106 4023036 RPD_2543 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569674.1 2843627 D 316057 CDS YP_569675.1 91977016 4023037 2844148..2845263 1 NC_007958.1 group 1 glycosyl transferase 2845263 4023037 RPD_2544 Rhodopseudomonas palustris BisB5 group 1 glycosyl transferase YP_569675.1 2844148 D 316057 CDS YP_569676.1 91977017 4023038 2845322..2846050 1 NC_007958.1 methyltransferase FkbM 2846050 4023038 RPD_2545 Rhodopseudomonas palustris BisB5 methyltransferase FkbM YP_569676.1 2845322 D 316057 CDS YP_569677.1 91977018 4023039 2846103..2847056 1 NC_007958.1 hypothetical protein 2847056 4023039 RPD_2546 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569677.1 2846103 D 316057 CDS YP_569678.1 91977019 4023040 complement(2847213..2847461) 1 NC_007958.1 hypothetical protein 2847461 4023040 RPD_2547 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569678.1 2847213 R 316057 CDS YP_569679.1 91977020 4023041 complement(2847607..2848086) 1 NC_007958.1 hypothetical protein 2848086 4023041 RPD_2548 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569679.1 2847607 R 316057 CDS YP_569680.1 91977021 4023042 2848236..2848979 1 NC_007958.1 hypothetical protein 2848979 4023042 RPD_2549 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569680.1 2848236 D 316057 CDS YP_569681.1 91977022 4023043 2849174..2849623 1 NC_007958.1 hypothetical protein 2849623 4023043 RPD_2550 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569681.1 2849174 D 316057 CDS YP_569682.1 91977023 4023045 2850786..2855999 1 NC_007958.1 alpha-2-macroglobulin-like protein 2855999 4023045 RPD_2551 Rhodopseudomonas palustris BisB5 alpha-2-macroglobulin-like protein YP_569682.1 2850786 D 316057 CDS YP_569683.1 91977024 4023046 2855996..2858248 1 NC_007958.1 penicillin-binding protein 1C 2858248 4023046 RPD_2552 Rhodopseudomonas palustris BisB5 penicillin-binding protein 1C YP_569683.1 2855996 D 316057 CDS YP_569684.1 91977025 4023047 2858300..2860042 1 NC_007958.1 glycosyl transferase family protein 2860042 4023047 RPD_2553 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_569684.1 2858300 D 316057 CDS YP_569685.1 91977026 4023048 2860044..2860886 1 NC_007958.1 PA-phosphatase-like phosphoesterase 2860886 4023048 RPD_2554 Rhodopseudomonas palustris BisB5 PA-phosphatase-like phosphoesterase YP_569685.1 2860044 D 316057 CDS YP_569686.1 91977027 4023049 2860950..2861708 1 NC_007958.1 glycosyl transferase family protein 2861708 4023049 RPD_2555 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_569686.1 2860950 D 316057 CDS YP_569687.1 91977028 4023050 2861702..2862040 1 NC_007958.1 lipid A biosynthesis-like 2862040 4023050 RPD_2556 Rhodopseudomonas palustris BisB5 lipid A biosynthesis-like YP_569687.1 2861702 D 316057 CDS YP_569688.1 91977029 4023051 complement(2862171..2863370) 1 NC_007958.1 cystathionine beta-lyase 2863370 4023051 RPD_2557 Rhodopseudomonas palustris BisB5 cystathionine beta-lyase YP_569688.1 2862171 R 316057 CDS YP_569689.1 91977030 4023052 2863703..2864719 1 NC_007958.1 lysine-arginine-ornithine-binding periplasmic protein 2864719 4023052 RPD_2558 Rhodopseudomonas palustris BisB5 lysine-arginine-ornithine-binding periplasmic protein YP_569689.1 2863703 D 316057 CDS YP_569690.1 91977031 4023053 2864737..2865942 1 NC_007958.1 amino acid ABC transporter permease 2865942 4023053 RPD_2559 Rhodopseudomonas palustris BisB5 amino acid ABC transporter permease YP_569690.1 2864737 D 316057 CDS YP_569691.1 91977032 4023054 2865939..2867447 1 NC_007958.1 amino acid ABC transporter permease 2867447 4023054 RPD_2560 Rhodopseudomonas palustris BisB5 amino acid ABC transporter permease YP_569691.1 2865939 D 316057 CDS YP_569692.1 91977033 4023055 2867463..2868203 1 NC_007958.1 ABC transporter-like protein 2868203 4023055 RPD_2561 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569692.1 2867463 D 316057 CDS YP_569693.1 91977034 4023056 complement(2868234..2868512) 1 NC_007958.1 hypothetical protein 2868512 4023056 RPD_2562 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569693.1 2868234 R 316057 CDS YP_569694.1 91977035 4023057 2868621..2869121 1 NC_007958.1 hypothetical protein 2869121 4023057 RPD_2563 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569694.1 2868621 D 316057 CDS YP_569695.1 91977036 4023058 complement(2869566..2870603) 1 NC_007958.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 2870603 4023058 RPD_2564 Rhodopseudomonas palustris BisB5 cysteine synthase A YP_569695.1 2869566 R 316057 CDS YP_569696.1 91977037 4023059 complement(2870732..2871961) 1 NC_007958.1 cyclopropane-fatty-acyl-phospholipid synthase 2871961 4023059 RPD_2565 Rhodopseudomonas palustris BisB5 cyclopropane-fatty-acyl-phospholipid synthase YP_569696.1 2870732 R 316057 CDS YP_569697.1 91977038 4023060 complement(2872010..2872861) 1 NC_007958.1 hypothetical protein 2872861 4023060 RPD_2566 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569697.1 2872010 R 316057 CDS YP_569698.1 91977039 4023061 complement(2872864..2874177) 1 NC_007958.1 amine oxidase 2874177 4023061 RPD_2567 Rhodopseudomonas palustris BisB5 amine oxidase YP_569698.1 2872864 R 316057 CDS YP_569699.1 91977040 4023062 2874610..2876058 1 NC_007958.1 RND efflux system outer membrane lipoprotein NodT 2876058 4023062 RPD_2568 Rhodopseudomonas palustris BisB5 RND efflux system outer membrane lipoprotein NodT YP_569699.1 2874610 D 316057 CDS YP_569700.1 91977041 4023063 2876048..2877436 1 NC_007958.1 secretion protein HlyD 2877436 4023063 RPD_2569 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_569700.1 2876048 D 316057 CDS YP_569701.1 91977042 4023064 2877491..2880616 1 NC_007958.1 acriflavin resistance protein 2880616 4023064 RPD_2570 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_569701.1 2877491 D 316057 CDS YP_569702.1 91977043 4023065 2880616..2883729 1 NC_007958.1 acriflavin resistance protein 2883729 4023065 RPD_2571 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_569702.1 2880616 D 316057 CDS YP_569703.1 91977044 4023066 2883740..2884471 1 NC_007958.1 hypothetical protein 2884471 4023066 RPD_2572 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569703.1 2883740 D 316057 CDS YP_569704.1 91977045 4023068 complement(2884802..2884975) 1 NC_007958.1 hypothetical protein 2884975 4023068 RPD_2573 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569704.1 2884802 R 316057 CDS YP_569705.1 91977046 4023069 complement(2885218..2885628) 1 NC_007958.1 hypothetical protein 2885628 4023069 RPD_2574 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569705.1 2885218 R 316057 CDS YP_569706.1 91977047 4023070 2886044..2886361 1 NC_007958.1 hypothetical protein 2886361 4023070 RPD_2575 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569706.1 2886044 D 316057 CDS YP_569707.1 91977048 4023072 2886633..2887298 1 NC_007958.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase 2887298 4023072 RPD_2576 Rhodopseudomonas palustris BisB5 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_569707.1 2886633 D 316057 CDS YP_569708.1 91977049 4023073 2887328..2888896 1 NC_007958.1 Type I secretion outer membrane protein, TolC 2888896 4023073 RPD_2577 Rhodopseudomonas palustris BisB5 Type I secretion outer membrane protein, TolC YP_569708.1 2887328 D 316057 CDS YP_569709.1 91977050 4023074 2889215..2890018 1 NC_007958.1 hypothetical protein 2890018 4023074 RPD_2578 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569709.1 2889215 D 316057 CDS YP_569710.1 91977051 4023075 2890251..2893157 1 NC_007958.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2893157 valS 4023075 valS Rhodopseudomonas palustris BisB5 valyl-tRNA synthetase YP_569710.1 2890251 D 316057 CDS YP_569711.1 91977052 4023076 2893413..2893970 1 NC_007958.1 hypothetical protein 2893970 4023076 RPD_2580 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569711.1 2893413 D 316057 CDS YP_569712.1 91977053 4023078 2894824..2895591 1 NC_007958.1 hypothetical protein 2895591 4023078 RPD_2582 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569712.1 2894824 D 316057 CDS YP_569713.1 91977054 4023079 complement(2895647..2896255) 1 NC_007958.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 2896255 4023079 RPD_2583 Rhodopseudomonas palustris BisB5 3-methyladenine DNA glycosylase YP_569713.1 2895647 R 316057 CDS YP_569714.1 91977055 4023080 2896401..2897360 1 NC_007958.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2897360 4023080 RPD_2584 Rhodopseudomonas palustris BisB5 lipoyl synthase YP_569714.1 2896401 D 316057 CDS YP_569715.1 91977056 4023081 2897371..2897844 1 NC_007958.1 cyclase/dehydrase 2897844 4023081 RPD_2585 Rhodopseudomonas palustris BisB5 cyclase/dehydrase YP_569715.1 2897371 D 316057 CDS YP_569716.1 91977057 4023082 complement(2897952..2898578) 1 NC_007958.1 CinA-like protein 2898578 4023082 RPD_2586 Rhodopseudomonas palustris BisB5 CinA-like protein YP_569716.1 2897952 R 316057 CDS YP_569717.1 91977058 4023083 complement(2898580..2899776) 1 NC_007958.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2899776 4023083 RPD_2587 Rhodopseudomonas palustris BisB5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_569717.1 2898580 R 316057 CDS YP_569718.1 91977059 4023084 2899977..2901038 1 NC_007958.1 dihydrouridine synthase TIM-barrel protein NifR3 2901038 4023084 RPD_2588 Rhodopseudomonas palustris BisB5 dihydrouridine synthase TIM-barrel protein NifR3 YP_569718.1 2899977 D 316057 CDS YP_569719.1 91977060 4023085 2901035..2902207 1 NC_007958.1 signal transduction histidine kinase, nitrogen specific, NtrB 2902207 4023085 RPD_2589 Rhodopseudomonas palustris BisB5 signal transduction histidine kinase, nitrogen specific, NtrB YP_569719.1 2901035 D 316057 CDS YP_569720.1 91977061 4023086 2902217..2903659 1 NC_007958.1 nitrogen metabolism transcriptional regulator NtrC 2903659 4023086 RPD_2590 Rhodopseudomonas palustris BisB5 nitrogen metabolism transcriptional regulator NtrC YP_569720.1 2902217 D 316057 CDS YP_569721.1 91977062 4023087 2903815..2906103 1 NC_007958.1 multi-sensor signal transduction histidine kinase 2906103 4023087 RPD_2591 Rhodopseudomonas palustris BisB5 multi-sensor signal transduction histidine kinase YP_569721.1 2903815 D 316057 CDS YP_569722.1 91977063 4023088 2906122..2907489 1 NC_007958.1 two component, sigma54 specific, transcriptional regulator, Fis family 2907489 4023088 RPD_2592 Rhodopseudomonas palustris BisB5 two component, sigma54 specific, transcriptional regulator, Fis family YP_569722.1 2906122 D 316057 CDS YP_569723.1 91977064 4023089 2907526..2908383 1 NC_007958.1 catalyzes the transamination of D-amino acids and their alpha-keto acids; D-amino acid aminotransferase 2908383 4023089 RPD_2593 Rhodopseudomonas palustris BisB5 D-amino acid aminotransferase YP_569723.1 2907526 D 316057 CDS YP_569724.1 91977065 4023090 2908563..2908811 1 NC_007958.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 2908811 hfq 4023090 hfq Rhodopseudomonas palustris BisB5 RNA-binding protein Hfq YP_569724.1 2908563 D 316057 CDS YP_569725.1 91977066 4023091 2908892..2910196 1 NC_007958.1 HSR1-like GTP-binding protein 2910196 4023091 RPD_2595 Rhodopseudomonas palustris BisB5 HSR1-like GTP-binding protein YP_569725.1 2908892 D 316057 CDS YP_569726.1 91977067 4023092 2910377..2913130 1 NC_007958.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 2913130 4023092 RPD_2596 Rhodopseudomonas palustris BisB5 DNA gyrase subunit A YP_569726.1 2910377 D 316057 CDS YP_569727.1 91977068 4023093 complement(2913253..2913510) 1 NC_007958.1 hypothetical protein 2913510 4023093 RPD_2597 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569727.1 2913253 R 316057 CDS YP_569728.1 91977069 4023094 2913821..2914318 1 NC_007958.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2914318 coaD 4023094 coaD Rhodopseudomonas palustris BisB5 phosphopantetheine adenylyltransferase YP_569728.1 2913821 D 316057 CDS YP_569729.1 91977070 4023095 2914344..2914907 1 NC_007958.1 cyclophilin type peptidyl-prolyl cis-trans isomerase 2914907 4023095 RPD_2599 Rhodopseudomonas palustris BisB5 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_569729.1 2914344 D 316057 CDS YP_569730.1 91977071 4023096 2914917..2915360 1 NC_007958.1 hypothetical protein 2915360 4023096 RPD_2600 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569730.1 2914917 D 316057 CDS YP_569731.1 91977072 4023097 2915336..2915803 1 NC_007958.1 cyclophilin type peptidyl-prolyl cis-trans isomerase 2915803 4023097 RPD_2601 Rhodopseudomonas palustris BisB5 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_569731.1 2915336 D 316057 CDS YP_569732.1 91977073 4023098 2915950..2917032 1 NC_007958.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2917032 queA 4023098 queA Rhodopseudomonas palustris BisB5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_569732.1 2915950 D 316057 CDS YP_569733.1 91977074 4023099 2917029..2918171 1 NC_007958.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2918171 tgt 4023099 tgt Rhodopseudomonas palustris BisB5 queuine tRNA-ribosyltransferase YP_569733.1 2917029 D 316057 CDS YP_569734.1 91977075 4023100 complement(2918195..2918569) 1 NC_007958.1 hypothetical protein 2918569 4023100 RPD_2604 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569734.1 2918195 R 316057 CDS YP_569735.1 91977076 4023101 2918686..2918928 1 NC_007958.1 hypothetical protein 2918928 4023101 RPD_2605 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569735.1 2918686 D 316057 CDS YP_569736.1 91977077 4023102 complement(2918938..2919819) 1 NC_007958.1 hypothetical protein 2919819 4023102 RPD_2606 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569736.1 2918938 R 316057 CDS YP_569737.1 91977078 4023103 2919996..2920397 1 NC_007958.1 endoribonuclease L-PSP 2920397 4023103 RPD_2607 Rhodopseudomonas palustris BisB5 endoribonuclease L-PSP YP_569737.1 2919996 D 316057 CDS YP_569738.1 91977079 4023104 2920468..2920671 1 NC_007958.1 hypothetical protein 2920671 4023104 RPD_2608 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569738.1 2920468 D 316057 CDS YP_569739.1 91977080 4023105 complement(2921103..2921282) 1 NC_007958.1 antenna complex subunit alpha/beta 2921282 4023105 RPD_2609 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_569739.1 2921103 R 316057 CDS YP_569740.1 91977081 4023106 complement(2921295..2921438) 1 NC_007958.1 antenna complex subunit alpha/beta 2921438 4023106 RPD_2610 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_569740.1 2921295 R 316057 CDS YP_569741.1 91977082 4023107 complement(2921603..2922193) 1 NC_007958.1 formyl transferase-like 2922193 4023107 RPD_2611 Rhodopseudomonas palustris BisB5 formyl transferase-like YP_569741.1 2921603 R 316057 CDS YP_569742.1 91977083 4023109 complement(2922488..2925175) 1 NC_007958.1 glycosyl transferase family protein 2925175 4023109 RPD_2612 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_569742.1 2922488 R 316057 CDS YP_569743.1 91977084 4023110 complement(2925363..2925974) 1 NC_007958.1 hypothetical protein 2925974 4023110 RPD_2613 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569743.1 2925363 R 316057 CDS YP_569744.1 91977085 4023111 2926192..2927868 1 NC_007958.1 putative beta (1-6) glucans synthase 2927868 4023111 RPD_2614 Rhodopseudomonas palustris BisB5 putative beta (1-6) glucans synthase YP_569744.1 2926192 D 316057 CDS YP_569745.1 91977086 4023112 complement(2927828..2928208) 1 NC_007958.1 hypothetical protein 2928208 4023112 RPD_2615 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569745.1 2927828 R 316057 CDS YP_569746.1 91977087 4023113 complement(2928275..2929645) 1 NC_007958.1 hypothetical protein 2929645 4023113 RPD_2616 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569746.1 2928275 R 316057 CDS YP_569747.1 91977088 4023114 2929812..2931170 1 NC_007958.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 2931170 glmU 4023114 glmU Rhodopseudomonas palustris BisB5 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_569747.1 2929812 D 316057 CDS YP_569748.1 91977089 4023115 2931317..2933143 1 NC_007958.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 2933143 4023115 RPD_2618 Rhodopseudomonas palustris BisB5 glucosamine--fructose-6-phosphate aminotransferase YP_569748.1 2931317 D 316057 CDS YP_569749.1 91977090 4023116 2933363..2934148 1 NC_007958.1 hypothetical protein 2934148 4023116 RPD_2619 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569749.1 2933363 D 316057 CDS YP_569750.1 91977091 4023117 complement(2934249..2936432) 1 NC_007958.1 DEAD/DEAH box helicase-like protein 2936432 4023117 RPD_2620 Rhodopseudomonas palustris BisB5 DEAD/DEAH box helicase-like protein YP_569750.1 2934249 R 316057 CDS YP_569751.1 91977092 4023118 2936505..2936795 1 NC_007958.1 hypothetical protein 2936795 4023118 RPD_2621 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569751.1 2936505 D 316057 CDS YP_569752.1 91977093 4023119 2936792..2940310 1 NC_007958.1 transcription-repair coupling factor 2940310 4023119 RPD_2622 Rhodopseudomonas palustris BisB5 transcription-repair coupling factor YP_569752.1 2936792 D 316057 CDS YP_569753.1 91977094 4023120 complement(2940328..2941551) 1 NC_007958.1 hypothetical protein 2941551 4023120 RPD_2623 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569753.1 2940328 R 316057 CDS YP_569754.1 91977095 4023121 complement(2941616..2943139) 1 NC_007958.1 putative acid-CoA ligase 2943139 4023121 RPD_2624 Rhodopseudomonas palustris BisB5 putative acid-CoA ligase YP_569754.1 2941616 R 316057 CDS YP_569755.1 91977096 4023122 complement(2943144..2944976) 1 NC_007958.1 extracellular solute-binding protein 2944976 4023122 RPD_2625 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_569755.1 2943144 R 316057 CDS YP_569756.1 91977097 4023123 2945234..2946022 1 NC_007958.1 invasion associated locus B 2946022 4023123 RPD_2626 Rhodopseudomonas palustris BisB5 invasion associated locus B YP_569756.1 2945234 D 316057 CDS YP_569757.1 91977098 4023124 complement(2946146..2946478) 1 NC_007958.1 hemimethylated DNA-binding region 2946478 4023124 RPD_2627 Rhodopseudomonas palustris BisB5 hemimethylated DNA-binding region YP_569757.1 2946146 R 316057 CDS YP_569758.1 91977099 4023125 2946539..2947561 1 NC_007958.1 auxin efflux carrier 2947561 4023125 RPD_2628 Rhodopseudomonas palustris BisB5 auxin efflux carrier YP_569758.1 2946539 D 316057 CDS YP_569759.1 91977100 4023126 complement(2947665..2948861) 1 NC_007958.1 2-octaprenyl-6-methoxyphenyl hydroxylase 2948861 4023126 RPD_2629 Rhodopseudomonas palustris BisB5 2-octaprenyl-6-methoxyphenyl hydroxylase YP_569759.1 2947665 R 316057 CDS YP_569760.1 91977101 4023127 2949011..2949745 1 NC_007958.1 phosphatidylcholine synthase 2949745 4023127 RPD_2630 Rhodopseudomonas palustris BisB5 phosphatidylcholine synthase YP_569760.1 2949011 D 316057 CDS YP_569761.1 91977102 4023128 2949742..2950464 1 NC_007958.1 integral membrane protein TerC 2950464 4023128 RPD_2631 Rhodopseudomonas palustris BisB5 integral membrane protein TerC YP_569761.1 2949742 D 316057 CDS YP_569762.1 91977103 4023129 2950565..2951539 1 NC_007958.1 zinc-binding alcohol dehydrogenase 2951539 4023129 RPD_2632 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_569762.1 2950565 D 316057 CDS YP_569763.1 91977104 4023130 complement(2951737..2953062) 1 NC_007958.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 2953062 rimO 4023130 rimO Rhodopseudomonas palustris BisB5 ribosomal protein S12 methylthiotransferase YP_569763.1 2951737 R 316057 CDS YP_569764.1 91977105 4023131 complement(2953474..2954238) 1 NC_007958.1 LamB/YcsF family protein 2954238 4023131 RPD_2634 Rhodopseudomonas palustris BisB5 LamB/YcsF family protein YP_569764.1 2953474 R 316057 CDS YP_569765.1 91977106 4023132 complement(2954269..2955276) 1 NC_007958.1 allophanate hydrolase subunit 2 2955276 4023132 RPD_2635 Rhodopseudomonas palustris BisB5 allophanate hydrolase subunit 2 YP_569765.1 2954269 R 316057 CDS YP_569766.1 91977107 4023133 complement(2955273..2956001) 1 NC_007958.1 hypothetical protein 2956001 4023133 RPD_2636 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569766.1 2955273 R 316057 CDS YP_569767.1 91977108 4023134 2956225..2956938 1 NC_007958.1 hypothetical protein 2956938 4023134 RPD_2637 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569767.1 2956225 D 316057 CDS YP_569768.1 91977109 4023135 2956956..2957363 1 NC_007958.1 cupin 2 barrel domain-containing protein 2957363 4023135 RPD_2638 Rhodopseudomonas palustris BisB5 cupin 2 barrel domain-containing protein YP_569768.1 2956956 D 316057 CDS YP_569769.1 91977110 4023136 complement(2957452..2958303) 1 NC_007958.1 hypothetical protein 2958303 4023136 RPD_2639 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569769.1 2957452 R 316057 CDS YP_569770.1 91977111 4023137 2958573..2959463 1 NC_007958.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2959463 4023137 RPD_2640 Rhodopseudomonas palustris BisB5 dihydrodipicolinate synthase YP_569770.1 2958573 D 316057 CDS YP_569771.1 91977112 4023138 2959532..2959963 1 NC_007958.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2959963 mscL 4023138 mscL Rhodopseudomonas palustris BisB5 large-conductance mechanosensitive channel YP_569771.1 2959532 D 316057 CDS YP_569772.1 91977113 4023139 2960001..2960474 1 NC_007958.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2960474 smpB 4023139 smpB Rhodopseudomonas palustris BisB5 SsrA-binding protein YP_569772.1 2960001 D 316057 CDS YP_569773.1 91977114 4023140 2960588..2961163 1 NC_007958.1 BcpB protein 2961163 4023140 RPD_2643 Rhodopseudomonas palustris BisB5 BcpB protein YP_569773.1 2960588 D 316057 CDS YP_569774.1 91977115 4023141 complement(2961250..2961927) 1 NC_007958.1 uracil-DNA glycosylase superfamily protein 2961927 4023141 RPD_2644 Rhodopseudomonas palustris BisB5 uracil-DNA glycosylase superfamily protein YP_569774.1 2961250 R 316057 CDS YP_569775.1 91977116 4023142 complement(2961929..2962615) 1 NC_007958.1 hypothetical protein 2962615 4023142 RPD_2645 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569775.1 2961929 R 316057 CDS YP_569776.1 91977117 4023143 2962901..2963293 1 NC_007958.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2963293 4023143 RPD_2646 Rhodopseudomonas palustris BisB5 DNA-directed RNA polymerase subunit omega YP_569776.1 2962901 D 316057 CDS YP_569777.1 91977118 4023144 2963542..2965830 1 NC_007958.1 RelA/SpoT family protein 2965830 4023144 RPD_2647 Rhodopseudomonas palustris BisB5 RelA/SpoT family protein YP_569777.1 2963542 D 316057 CDS YP_569778.1 91977119 4023145 2965908..2966672 1 NC_007958.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2966672 4023145 RPD_2648 Rhodopseudomonas palustris BisB5 pyridoxine 5'-phosphate synthase YP_569778.1 2965908 D 316057 CDS YP_569779.1 91977120 4023146 2966669..2967088 1 NC_007958.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2967088 acpS 4023146 acpS Rhodopseudomonas palustris BisB5 4'-phosphopantetheinyl transferase YP_569779.1 2966669 D 316057 CDS YP_569780.1 91977121 4023147 2967350..2968108 1 NC_007958.1 peptidase S26A, signal peptidase I 2968108 4023147 RPD_2650 Rhodopseudomonas palustris BisB5 peptidase S26A, signal peptidase I YP_569780.1 2967350 D 316057 CDS YP_569781.1 91977122 4023148 2968105..2968920 1 NC_007958.1 ribonuclease III 2968920 4023148 RPD_2651 Rhodopseudomonas palustris BisB5 ribonuclease III YP_569781.1 2968105 D 316057 CDS YP_569782.1 91977123 4023149 2968913..2969836 1 NC_007958.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2969836 era 4023149 era Rhodopseudomonas palustris BisB5 GTP-binding protein Era YP_569782.1 2968913 D 316057 CDS YP_569783.1 91977124 4023150 2969847..2970227 1 NC_007958.1 hypothetical protein 2970227 4023150 RPD_2653 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569783.1 2969847 D 316057 CDS YP_569784.1 91977125 4023151 2970277..2971026 1 NC_007958.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 2971026 recO 4023151 recO Rhodopseudomonas palustris BisB5 DNA repair protein RecO YP_569784.1 2970277 D 316057 CDS YP_569785.1 91977126 4023152 2971131..2973392 1 NC_007958.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2973392 4023152 RPD_2655 Rhodopseudomonas palustris BisB5 DNA topoisomerase IV subunit A YP_569785.1 2971131 D 316057 CDS YP_569786.1 91977127 4023153 complement(2973448..2973732) 1 NC_007958.1 hypothetical protein 2973732 4023153 RPD_2656 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569786.1 2973448 R 316057 CDS YP_569787.1 91977128 4023154 2973889..2975271 1 NC_007958.1 manganese transport protein MntH 2975271 4023154 RPD_2657 Rhodopseudomonas palustris BisB5 manganese transport protein MntH YP_569787.1 2973889 D 316057 CDS YP_569788.1 91977129 4023155 complement(2975362..2976135) 1 NC_007958.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2976135 4023155 RPD_2658 Rhodopseudomonas palustris BisB5 arginyl-tRNA-protein transferase YP_569788.1 2975362 R 316057 CDS YP_569789.1 91977130 4023156 complement(2976206..2976763) 1 NC_007958.1 hypothetical protein 2976763 4023156 RPD_2659 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569789.1 2976206 R 316057 CDS YP_569790.1 91977131 4023157 complement(2976901..2977953) 1 NC_007958.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2977953 4023157 RPD_2660 Rhodopseudomonas palustris BisB5 delta-aminolevulinic acid dehydratase YP_569790.1 2976901 R 316057 CDS YP_569791.1 91977132 4023158 2978133..2978603 1 NC_007958.1 hypothetical protein 2978603 4023158 RPD_2661 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569791.1 2978133 D 316057 CDS YP_569792.1 91977133 4023159 2978691..2980256 1 NC_007958.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2980256 4023159 RPD_2662 Rhodopseudomonas palustris BisB5 acyl-CoA synthetase YP_569792.1 2978691 D 316057 CDS YP_569793.1 91977134 4023160 2980587..2981105 1 NC_007958.1 MarR family transcriptional regulator 2981105 4023160 RPD_2663 Rhodopseudomonas palustris BisB5 MarR family transcriptional regulator YP_569793.1 2980587 D 316057 CDS YP_569794.1 91977135 4023161 2981330..2981557 1 NC_007958.1 hypothetical protein 2981557 4023161 RPD_2664 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569794.1 2981330 D 316057 CDS YP_569795.1 91977136 4023162 2981574..2981789 1 NC_007958.1 hypothetical protein 2981789 4023162 RPD_2665 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569795.1 2981574 D 316057 CDS YP_569796.1 91977137 4023163 complement(2981817..2982155) 1 NC_007958.1 hypothetical protein 2982155 4023163 RPD_2666 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569796.1 2981817 R 316057 CDS YP_569797.1 91977138 4023164 2982574..2982780 1 NC_007958.1 hypothetical protein 2982780 4023164 RPD_2667 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569797.1 2982574 D 316057 CDS YP_569798.1 91977139 4023165 2982796..2983476 1 NC_007958.1 glutathione S-transferase-like protein 2983476 4023165 RPD_2668 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_569798.1 2982796 D 316057 CDS YP_569799.1 91977140 4023166 complement(2983595..2983993) 1 NC_007958.1 PilT protein-like protein 2983993 4023166 RPD_2669 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_569799.1 2983595 R 316057 CDS YP_569800.1 91977141 4023167 complement(2983993..2984226) 1 NC_007958.1 hypothetical protein 2984226 4023167 RPD_2670 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569800.1 2983993 R 316057 CDS YP_569801.2 162138288 4023168 2984488..2985789 1 NC_007958.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2985789 glyA 4023168 glyA Rhodopseudomonas palustris BisB5 serine hydroxymethyltransferase YP_569801.2 2984488 D 316057 CDS YP_569802.1 91977143 4023169 2985919..2986401 1 NC_007958.1 transcriptional regulator NrdR 2986401 nrdR 4023169 nrdR Rhodopseudomonas palustris BisB5 transcriptional regulator NrdR YP_569802.1 2985919 D 316057 CDS YP_569803.1 91977144 4023170 2986398..2987588 1 NC_007958.1 riboflavin biosynthesis protein RibD 2987588 4023170 RPD_2673 Rhodopseudomonas palustris BisB5 riboflavin biosynthesis protein RibD YP_569803.1 2986398 D 316057 CDS YP_569804.1 91977145 4023171 2987602..2988210 1 NC_007958.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2988210 4023171 RPD_2674 Rhodopseudomonas palustris BisB5 riboflavin synthase subunit alpha YP_569804.1 2987602 D 316057 CDS YP_569805.1 91977146 4023172 2988350..2988841 1 NC_007958.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2988841 ribH 4023172 ribH Rhodopseudomonas palustris BisB5 6,7-dimethyl-8-ribityllumazine synthase YP_569805.1 2988350 D 316057 CDS YP_569806.1 91977147 4023173 2988844..2989368 1 NC_007958.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 2989368 nusB 4023173 nusB Rhodopseudomonas palustris BisB5 transcription antitermination protein NusB YP_569806.1 2988844 D 316057 CDS YP_569807.1 91977148 4023174 2989514..2990485 1 NC_007958.1 thiamine-monophosphate kinase 2990485 4023174 RPD_2677 Rhodopseudomonas palustris BisB5 thiamine-monophosphate kinase YP_569807.1 2989514 D 316057 CDS YP_569808.1 91977149 4023175 2990710..2992830 1 NC_007958.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 2992830 hppA 4023175 hppA Rhodopseudomonas palustris BisB5 membrane-bound proton-translocating pyrophosphatase YP_569808.1 2990710 D 316057 CDS YP_569809.1 91977150 4023176 2992933..2993799 1 NC_007958.1 alpha/beta hydrolase fold protein 2993799 4023176 RPD_2679 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_569809.1 2992933 D 316057 CDS YP_569810.1 91977151 4023177 2994179..2995360 1 NC_007958.1 secretion protein HlyD 2995360 4023177 RPD_2680 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_569810.1 2994179 D 316057 CDS YP_569811.1 91977152 4023178 2995391..2998540 1 NC_007958.1 hydrophobe/amphiphile efflux-1 HAE1 2998540 4023178 RPD_2681 Rhodopseudomonas palustris BisB5 hydrophobe/amphiphile efflux-1 HAE1 YP_569811.1 2995391 D 316057 CDS YP_569812.1 91977153 4023179 complement(2998661..2999137) 1 NC_007958.1 SmpA/OmlA 2999137 4023179 RPD_2682 Rhodopseudomonas palustris BisB5 SmpA/OmlA YP_569812.1 2998661 R 316057 CDS YP_569813.1 91977154 4023180 2999236..2999775 1 NC_007958.1 ubiquinol-cytochrome C chaperone 2999775 4023180 RPD_2683 Rhodopseudomonas palustris BisB5 ubiquinol-cytochrome C chaperone YP_569813.1 2999236 D 316057 CDS YP_569814.1 91977155 4023181 2999793..3000356 1 NC_007958.1 hypothetical protein 3000356 4023181 RPD_2684 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569814.1 2999793 D 316057 CDS YP_569815.1 91977156 4023182 3000589..3001650 1 NC_007958.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 3001650 4023182 RPD_2685 Rhodopseudomonas palustris BisB5 putative glycerol-3-phosphate acyltransferase PlsX YP_569815.1 3000589 D 316057 CDS YP_569816.1 91977157 4023183 3001647..3002624 1 NC_007958.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 3002624 4023183 RPD_2686 Rhodopseudomonas palustris BisB5 3-oxoacyl-(acyl carrier protein) synthase III YP_569816.1 3001647 D 316057 CDS YP_569817.1 91977158 4023184 3002757..3003128 1 NC_007958.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 3003128 ihfA 4023184 ihfA Rhodopseudomonas palustris BisB5 integration host factor subunit alpha YP_569817.1 3002757 D 316057 CDS YP_569818.1 91977159 4023185 3003143..3003832 1 NC_007958.1 regulatory protein MerR 3003832 4023185 RPD_2688 Rhodopseudomonas palustris BisB5 regulatory protein MerR YP_569818.1 3003143 D 316057 CDS YP_569819.1 91977160 4023187 3004164..3004595 1 NC_007958.1 hypothetical protein 3004595 4023187 RPD_2689 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569819.1 3004164 D 316057 CDS YP_569820.1 91977161 4023188 complement(3004731..3005048) 1 NC_007958.1 hypothetical protein 3005048 4023188 RPD_2690 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569820.1 3004731 R 316057 CDS YP_569821.1 91977162 4023189 3005281..3006249 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 3006249 4023189 RPD_2691 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_569821.1 3005281 D 316057 CDS YP_569822.1 91977163 4023190 3006438..3008342 1 NC_007958.1 K+ potassium transporter 3008342 4023190 RPD_2692 Rhodopseudomonas palustris BisB5 K+ potassium transporter YP_569822.1 3006438 D 316057 CDS YP_569823.1 91977164 4023191 3008335..3009126 1 NC_007958.1 hypothetical protein 3009126 4023191 RPD_2693 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569823.1 3008335 D 316057 CDS YP_569824.1 91977165 4023192 complement(3009166..3010695) 1 NC_007958.1 sugar transferase 3010695 4023192 RPD_2694 Rhodopseudomonas palustris BisB5 sugar transferase YP_569824.1 3009166 R 316057 CDS YP_569825.1 91977166 4023193 complement(3010826..3011962) 1 NC_007958.1 group 1 glycosyl transferase 3011962 4023193 RPD_2695 Rhodopseudomonas palustris BisB5 group 1 glycosyl transferase YP_569825.1 3010826 R 316057 CDS YP_569826.1 91977167 4023194 complement(3011964..3012554) 1 NC_007958.1 polysaccharide export protein 3012554 4023194 RPD_2696 Rhodopseudomonas palustris BisB5 polysaccharide export protein YP_569826.1 3011964 R 316057 CDS YP_569827.1 91977168 4023195 3012737..3015046 1 NC_007958.1 lipopolysaccharide biosynthesis 3015046 4023195 RPD_2697 Rhodopseudomonas palustris BisB5 lipopolysaccharide biosynthesis YP_569827.1 3012737 D 316057 CDS YP_569828.1 91977169 4023196 complement(3015160..3016362) 1 NC_007958.1 hypothetical protein 3016362 4023196 RPD_2698 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569828.1 3015160 R 316057 CDS YP_569829.1 91977170 4023197 3016488..3017534 1 NC_007958.1 polysaccharide deacetylase 3017534 4023197 RPD_2699 Rhodopseudomonas palustris BisB5 polysaccharide deacetylase YP_569829.1 3016488 D 316057 CDS YP_569830.1 91977171 4023198 complement(3017528..3017737) 1 NC_007958.1 hypothetical protein 3017737 4023198 RPD_2700 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569830.1 3017528 R 316057 CDS YP_569831.1 91977172 4023199 3017834..3018922 1 NC_007958.1 cytochrome oxidase assembly 3018922 4023199 RPD_2701 Rhodopseudomonas palustris BisB5 cytochrome oxidase assembly YP_569831.1 3017834 D 316057 CDS YP_569832.1 91977173 4023200 complement(3018939..3019541) 1 NC_007958.1 hypothetical protein 3019541 4023200 RPD_2702 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569832.1 3018939 R 316057 CDS YP_569833.1 91977174 4023201 complement(3019567..3020847) 1 NC_007958.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 3020847 4023201 RPD_2703 Rhodopseudomonas palustris BisB5 O-acetylhomoserine aminocarboxypropyltransferase YP_569833.1 3019567 R 316057 CDS YP_569834.1 91977175 4023202 complement(3020960..3021544) 1 NC_007958.1 CoA-binding protein 3021544 4023202 RPD_2704 Rhodopseudomonas palustris BisB5 CoA-binding protein YP_569834.1 3020960 R 316057 CDS YP_569835.1 91977176 4023203 complement(3021610..3022437) 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3022437 4023203 RPD_2705 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_569835.1 3021610 R 316057 CDS YP_569836.1 91977177 4023204 3022527..3022955 1 NC_007958.1 phenylacetic acid degradation-like protein 3022955 4023204 RPD_2706 Rhodopseudomonas palustris BisB5 phenylacetic acid degradation-like protein YP_569836.1 3022527 D 316057 CDS YP_569837.1 91977178 4023205 3023110..3023574 1 NC_007958.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 3023574 rplM 4023205 rplM Rhodopseudomonas palustris BisB5 50S ribosomal protein L13 YP_569837.1 3023110 D 316057 CDS YP_569838.1 91977179 4023206 3023576..3024052 1 NC_007958.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 3024052 rpsI 4023206 rpsI Rhodopseudomonas palustris BisB5 30S ribosomal protein S9 YP_569838.1 3023576 D 316057 CDS YP_569839.1 91977180 4023207 3024284..3025519 1 NC_007958.1 GGDEF domain-containing protein 3025519 4023207 RPD_2709 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_569839.1 3024284 D 316057 CDS YP_569840.1 91977181 4023208 3025600..3025902 1 NC_007958.1 antibiotic biosynthesis monooxygenase 3025902 4023208 RPD_2710 Rhodopseudomonas palustris BisB5 antibiotic biosynthesis monooxygenase YP_569840.1 3025600 D 316057 CDS YP_569841.1 91977182 4023209 complement(3025886..3027073) 1 NC_007958.1 hypothetical protein 3027073 4023209 RPD_2711 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569841.1 3025886 R 316057 CDS YP_569842.1 91977183 4023210 3027298..3028242 1 NC_007958.1 rare lipoprotein A 3028242 4023210 RPD_2712 Rhodopseudomonas palustris BisB5 rare lipoprotein A YP_569842.1 3027298 D 316057 CDS YP_569843.1 91977184 4023211 complement(3028253..3029200) 1 NC_007958.1 alpha/beta hydrolase fold protein 3029200 4023211 RPD_2713 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_569843.1 3028253 R 316057 CDS YP_569844.1 91977185 4023212 3029324..3030622 1 NC_007958.1 Serine-type D-Ala-D-Ala carboxypeptidase 3030622 4023212 RPD_2714 Rhodopseudomonas palustris BisB5 Serine-type D-Ala-D-Ala carboxypeptidase YP_569844.1 3029324 D 316057 CDS YP_569845.1 91977186 4023213 3030625..3031383 1 NC_007958.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 3031383 4023213 RPD_2715 Rhodopseudomonas palustris BisB5 thymidylate kinase YP_569845.1 3030625 D 316057 CDS YP_569846.1 91977187 4023214 3031380..3032420 1 NC_007958.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 3032420 4023214 RPD_2716 Rhodopseudomonas palustris BisB5 DNA polymerase III subunit delta' YP_569846.1 3031380 D 316057 CDS YP_569847.1 91977188 4023215 3032500..3034044 1 NC_007958.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 3034044 4023215 RPD_2717 Rhodopseudomonas palustris BisB5 methionyl-tRNA synthetase YP_569847.1 3032500 D 316057 CDS YP_569848.1 91977189 4023216 3034049..3034840 1 NC_007958.1 TatD-related deoxyribonuclease 3034840 4023216 RPD_2718 Rhodopseudomonas palustris BisB5 TatD-related deoxyribonuclease YP_569848.1 3034049 D 316057 CDS YP_569849.1 91977190 4023217 3034865..3035665 1 NC_007958.1 putative hydrolase 3035665 4023217 RPD_2719 Rhodopseudomonas palustris BisB5 putative hydrolase YP_569849.1 3034865 D 316057 CDS YP_569850.1 91977191 4023218 complement(3035808..3037457) 1 NC_007958.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 3037457 4023218 RPD_2720 Rhodopseudomonas palustris BisB5 acyl-CoA synthetase YP_569850.1 3035808 R 316057 CDS YP_569851.1 91977192 4023219 complement(3037511..3039394) 1 NC_007958.1 TRAP C4-dicarboxylate transport system permease DctM 3039394 4023219 RPD_2721 Rhodopseudomonas palustris BisB5 TRAP C4-dicarboxylate transport system permease DctM YP_569851.1 3037511 R 316057 CDS YP_569852.1 91977193 4023220 complement(3039404..3040423) 1 NC_007958.1 TRAP dicarboxylate transporter subunit DctP 3040423 4023220 RPD_2722 Rhodopseudomonas palustris BisB5 TRAP dicarboxylate transporter subunit DctP YP_569852.1 3039404 R 316057 CDS YP_569853.1 91977194 4023221 3041015..3042118 1 NC_007958.1 UDP-N-acetylglucosamine 2-epimerase 3042118 4023221 RPD_2723 Rhodopseudomonas palustris BisB5 UDP-N-acetylglucosamine 2-epimerase YP_569853.1 3041015 D 316057 CDS YP_569854.1 91977195 4023222 3042136..3043629 1 NC_007958.1 bacteriophage N4 adsorption protein B 3043629 4023222 RPD_2724 Rhodopseudomonas palustris BisB5 bacteriophage N4 adsorption protein B YP_569854.1 3042136 D 316057 CDS YP_569855.1 91977196 4023223 3043643..3046213 1 NC_007958.1 TPR repeat-containing protein 3046213 4023223 RPD_2725 Rhodopseudomonas palustris BisB5 TPR repeat-containing protein YP_569855.1 3043643 D 316057 CDS YP_569856.1 91977197 4023224 complement(3046317..3046976) 1 NC_007958.1 hypothetical protein 3046976 4023224 RPD_2726 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569856.1 3046317 R 316057 CDS YP_569857.1 91977198 4023225 3047336..3048784 1 NC_007958.1 curlin associated protein 3048784 4023225 RPD_2727 Rhodopseudomonas palustris BisB5 curlin associated protein YP_569857.1 3047336 D 316057 CDS YP_569858.1 91977199 4023226 3048913..3050217 1 NC_007958.1 curlin associated protein 3050217 4023226 RPD_2728 Rhodopseudomonas palustris BisB5 curlin associated protein YP_569858.1 3048913 D 316057 CDS YP_569859.1 91977200 4023227 3050291..3050611 1 NC_007958.1 hypothetical protein 3050611 4023227 RPD_2729 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569859.1 3050291 D 316057 CDS YP_569860.1 91977201 4023228 3050608..3051117 1 NC_007958.1 putative minor curlin subunit (fimbrin sef17 minor subunit) 3051117 4023228 RPD_2730 Rhodopseudomonas palustris BisB5 putative minor curlin subunit (fimbrin sef17 minor subunit) YP_569860.1 3050608 D 316057 CDS YP_569861.1 91977202 4023229 3051114..3051524 1 NC_007958.1 hypothetical protein 3051524 4023229 RPD_2731 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569861.1 3051114 D 316057 CDS YP_569862.1 91977203 4023230 3051549..3052490 1 NC_007958.1 putative curli production assembly/transport component csgg 3052490 4023230 RPD_2732 Rhodopseudomonas palustris BisB5 putative curli production assembly/transport component csgg YP_569862.1 3051549 D 316057 CDS YP_569863.1 91977204 4023231 3052493..3053233 1 NC_007958.1 lytic transglycosylase 3053233 4023231 RPD_2733 Rhodopseudomonas palustris BisB5 lytic transglycosylase YP_569863.1 3052493 D 316057 CDS YP_569864.1 91977205 4023232 complement(3053234..3053548) 1 NC_007958.1 hypothetical protein 3053548 4023232 RPD_2734 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569864.1 3053234 R 316057 CDS YP_569865.1 91977206 4023233 3053573..3053860 1 NC_007958.1 hypothetical protein 3053860 4023233 RPD_2735 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569865.1 3053573 D 316057 CDS YP_569866.1 91977207 4023234 complement(3053888..3054910) 1 NC_007958.1 hypothetical protein 3054910 4023234 RPD_2736 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569866.1 3053888 R 316057 CDS YP_569867.1 91977208 4023235 complement(3055256..3055531) 1 NC_007958.1 hypothetical protein 3055531 4023235 RPD_2737 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569867.1 3055256 R 316057 CDS YP_569868.1 91977209 4023236 complement(3055950..3056369) 1 NC_007958.1 histone-like nucleoid-structuring protein H-NS 3056369 4023236 RPD_2738 Rhodopseudomonas palustris BisB5 histone-like nucleoid-structuring protein H-NS YP_569868.1 3055950 R 316057 CDS YP_569869.1 91977210 4023237 3058480..3058875 1 NC_007958.1 hypothetical protein 3058875 4023237 RPD_2739 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569869.1 3058480 D 316057 CDS YP_569870.1 91977211 4023238 3058959..3060347 1 NC_007958.1 secretion protein HlyD 3060347 4023238 RPD_2740 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_569870.1 3058959 D 316057 CDS YP_569871.1 91977212 4023239 3060344..3063475 1 NC_007958.1 heavy metal efflux pump CzcA 3063475 4023239 RPD_2741 Rhodopseudomonas palustris BisB5 heavy metal efflux pump CzcA YP_569871.1 3060344 D 316057 CDS YP_569872.1 91977213 4023240 complement(3063635..3064159) 1 NC_007958.1 triple helix repeat-containing collagen 3064159 4023240 RPD_2742 Rhodopseudomonas palustris BisB5 triple helix repeat-containing collagen YP_569872.1 3063635 R 316057 CDS YP_569873.1 91977214 4023241 3064417..3066483 1 NC_007958.1 UvrD/REP helicase 3066483 4023241 RPD_2743 Rhodopseudomonas palustris BisB5 UvrD/REP helicase YP_569873.1 3064417 D 316057 CDS YP_569874.1 91977215 4023242 complement(3066500..3066817) 1 NC_007958.1 hypothetical protein 3066817 4023242 RPD_2744 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569874.1 3066500 R 316057 CDS YP_569875.1 91977216 4023244 3067181..3067906 1 NC_007958.1 nitrile hydratase subunit alpha 3067906 4023244 RPD_2746 Rhodopseudomonas palustris BisB5 nitrile hydratase subunit alpha YP_569875.1 3067181 D 316057 CDS YP_569876.1 91977217 4023245 3067906..3068562 1 NC_007958.1 nitrile hydratase 3068562 4023245 RPD_2747 Rhodopseudomonas palustris BisB5 nitrile hydratase YP_569876.1 3067906 D 316057 CDS YP_569877.1 91977218 4023246 3068562..3068954 1 NC_007958.1 hypothetical protein 3068954 4023246 RPD_2748 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569877.1 3068562 D 316057 CDS YP_569878.1 91977219 4023247 3069162..3070304 1 NC_007958.1 hypothetical protein 3070304 4023247 RPD_2749 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569878.1 3069162 D 316057 CDS YP_569879.1 91977220 4023248 complement(3070277..3071590) 1 NC_007958.1 beta-lactamase 3071590 4023248 RPD_2750 Rhodopseudomonas palustris BisB5 beta-lactamase YP_569879.1 3070277 R 316057 CDS YP_569880.1 91977221 4023249 complement(3071592..3072308) 1 NC_007958.1 ExsB 3072308 4023249 RPD_2751 Rhodopseudomonas palustris BisB5 ExsB YP_569880.1 3071592 R 316057 CDS YP_569881.1 91977222 4023250 3072422..3073258 1 NC_007958.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 3073258 mazG 4023250 mazG Rhodopseudomonas palustris BisB5 nucleoside triphosphate pyrophosphohydrolase YP_569881.1 3072422 D 316057 CDS YP_569882.1 91977223 4023251 3073343..3074638 1 NC_007958.1 hypothetical protein 3074638 4023251 RPD_2753 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569882.1 3073343 D 316057 CDS YP_569883.1 91977224 4023252 3074635..3075003 1 NC_007958.1 hypothetical protein 3075003 4023252 RPD_2754 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569883.1 3074635 D 316057 CDS YP_569884.1 91977225 4023253 complement(3075074..3075583) 1 NC_007958.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 3075583 4023253 RPD_2755 Rhodopseudomonas palustris BisB5 single-stranded DNA-binding protein YP_569884.1 3075074 R 316057 CDS YP_569885.1 91977226 4023254 3076065..3076790 1 NC_007958.1 putative outer membrane protein 3076790 4023254 RPD_2756 Rhodopseudomonas palustris BisB5 putative outer membrane protein YP_569885.1 3076065 D 316057 CDS YP_569886.1 91977227 4023255 3076848..3077120 1 NC_007958.1 hypothetical protein 3077120 4023255 RPD_2757 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569886.1 3076848 D 316057 CDS YP_569887.1 91977228 4023256 3077117..3080143 1 NC_007958.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 3080143 uvrA 4023256 uvrA Rhodopseudomonas palustris BisB5 excinuclease ABC subunit A YP_569887.1 3077117 D 316057 CDS YP_569888.1 91977229 4023257 complement(3080353..3080706) 1 NC_007958.1 hypothetical protein 3080706 4023257 RPD_2759 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569888.1 3080353 R 316057 CDS YP_569889.1 91977230 4023258 3080809..3082146 1 NC_007958.1 hypothetical protein 3082146 4023258 RPD_2760 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569889.1 3080809 D 316057 CDS YP_569890.1 91977231 4023259 3082276..3082641 1 NC_007958.1 hypothetical protein 3082641 4023259 RPD_2761 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569890.1 3082276 D 316057 CDS YP_569891.1 91977232 4023260 3082825..3083601 1 NC_007958.1 Ion transport 2 3083601 4023260 RPD_2762 Rhodopseudomonas palustris BisB5 Ion transport 2 YP_569891.1 3082825 D 316057 CDS YP_569892.1 91977233 4023261 complement(3083710..3083838) 1 NC_007958.1 hypothetical protein 3083838 4023261 RPD_2763 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569892.1 3083710 R 316057 CDS YP_569893.1 91977234 4023262 3083971..3084492 1 NC_007958.1 hypothetical protein 3084492 4023262 RPD_2764 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569893.1 3083971 D 316057 CDS YP_569894.1 91977235 4023263 3084726..3085016 1 NC_007958.1 hypothetical protein 3085016 4023263 RPD_2765 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569894.1 3084726 D 316057 CDS YP_569895.1 91977236 4023264 3085099..3085506 1 NC_007958.1 thioesterase superfamily protein 3085506 4023264 RPD_2766 Rhodopseudomonas palustris BisB5 thioesterase superfamily protein YP_569895.1 3085099 D 316057 CDS YP_569896.1 91977237 4023265 complement(3085740..3086102) 1 NC_007958.1 hypothetical protein 3086102 4023265 RPD_2767 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569896.1 3085740 R 316057 CDS YP_569897.1 91977238 4023266 complement(3086102..3086878) 1 NC_007958.1 hypothetical protein 3086878 4023266 RPD_2768 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569897.1 3086102 R 316057 CDS YP_569898.1 91977239 4023267 complement(3086875..3087399) 1 NC_007958.1 regulatory protein MarR 3087399 4023267 RPD_2769 Rhodopseudomonas palustris BisB5 regulatory protein MarR YP_569898.1 3086875 R 316057 CDS YP_569899.1 91977240 4023268 complement(3087832..3088215) 1 NC_007958.1 hypothetical protein 3088215 4023268 RPD_2770 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569899.1 3087832 R 316057 CDS YP_569900.1 91977241 4023269 3088644..3089546 1 NC_007958.1 hypothetical protein 3089546 4023269 RPD_2771 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569900.1 3088644 D 316057 CDS YP_569901.1 91977242 4023270 3090031..3090183 1 NC_007958.1 hypothetical protein 3090183 4023270 RPD_2772 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569901.1 3090031 D 316057 CDS YP_569902.1 91977243 4023271 3090328..3091761 1 NC_007958.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 3091761 4023271 RPD_2773 Rhodopseudomonas palustris BisB5 tRNA (uracil-5-)-methyltransferase Gid YP_569902.1 3090328 D 316057 CDS YP_569903.1 91977244 4023272 complement(3091866..3092732) 1 NC_007958.1 phytoene synthase 3092732 4023272 RPD_2774 Rhodopseudomonas palustris BisB5 phytoene synthase YP_569903.1 3091866 R 316057 CDS YP_569904.1 91977245 4023273 complement(3092729..3093112) 1 NC_007958.1 hypothetical protein 3093112 4023273 RPD_2775 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569904.1 3092729 R 316057 CDS YP_569905.1 91977246 4023274 complement(3093116..3094225) 1 NC_007958.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3094225 secF 4023274 secF Rhodopseudomonas palustris BisB5 preprotein translocase subunit SecF YP_569905.1 3093116 R 316057 CDS YP_569906.1 91977247 4023275 complement(3094251..3095852) 1 NC_007958.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3095852 secD 4023275 secD Rhodopseudomonas palustris BisB5 preprotein translocase subunit SecD YP_569906.1 3094251 R 316057 CDS YP_569907.1 91977248 4023276 complement(3095893..3096333) 1 NC_007958.1 preprotein translocase subunit YajC 3096333 4023276 RPD_2778 Rhodopseudomonas palustris BisB5 preprotein translocase subunit YajC YP_569907.1 3095893 R 316057 CDS YP_569908.1 91977249 4023277 3096523..3097500 1 NC_007958.1 hypothetical protein 3097500 4023277 RPD_2779 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569908.1 3096523 D 316057 CDS YP_569909.1 91977250 4023278 3097589..3099301 1 NC_007958.1 hypothetical protein 3099301 4023278 RPD_2780 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569909.1 3097589 D 316057 CDS YP_569910.1 91977251 4023279 complement(3099495..3100931) 1 NC_007958.1 peptidase M23B 3100931 4023279 RPD_2781 Rhodopseudomonas palustris BisB5 peptidase M23B YP_569910.1 3099495 R 316057 CDS YP_569911.1 91977252 4023280 complement(3101031..3101684) 1 NC_007958.1 protein-L-isoaspartate O-methyltransferase 3101684 4023280 RPD_2782 Rhodopseudomonas palustris BisB5 protein-L-isoaspartate O-methyltransferase YP_569911.1 3101031 R 316057 CDS YP_569912.1 91977253 4023281 3101898..3102269 1 NC_007958.1 response regulator receiver 3102269 4023281 RPD_2783 Rhodopseudomonas palustris BisB5 response regulator receiver YP_569912.1 3101898 D 316057 CDS YP_569913.1 91977254 4023282 complement(3102411..3103178) 1 NC_007958.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 3103178 surE 4023282 surE Rhodopseudomonas palustris BisB5 stationary phase survival protein SurE YP_569913.1 3102411 R 316057 CDS YP_569914.1 91977255 4023283 3103399..3103677 1 NC_007958.1 hypothetical protein 3103677 4023283 RPD_2785 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569914.1 3103399 D 316057 CDS YP_569915.1 91977256 4023284 complement(3103739..3104323) 1 NC_007958.1 Allergen V5/Tpx-1-like protein 3104323 4023284 RPD_2786 Rhodopseudomonas palustris BisB5 Allergen V5/Tpx-1-like protein YP_569915.1 3103739 R 316057 CDS YP_569916.1 91977257 4023285 complement(3104320..3105624) 1 NC_007958.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 3105624 4023285 RPD_2787 Rhodopseudomonas palustris BisB5 seryl-tRNA synthetase YP_569916.1 3104320 R 316057 CDS YP_569917.1 91977258 4023286 complement(3105827..3106630) 1 NC_007958.1 Sec-independent protein translocase TatC 3106630 4023286 RPD_2788 Rhodopseudomonas palustris BisB5 Sec-independent protein translocase TatC YP_569917.1 3105827 R 316057 CDS YP_569918.1 91977259 4023287 complement(3106627..3107229) 1 NC_007958.1 twin-arginine translocation protein TatB 3107229 4023287 RPD_2789 Rhodopseudomonas palustris BisB5 twin-arginine translocation protein TatB YP_569918.1 3106627 R 316057 CDS YP_569919.1 91977260 4023288 complement(3107435..3107674) 1 NC_007958.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 3107674 tatA 4023288 tatA Rhodopseudomonas palustris BisB5 twin arginine translocase protein A YP_569919.1 3107435 R 316057 CDS YP_569920.1 91977261 4023289 complement(3107825..3108994) 1 NC_007958.1 chromosome segregation and condensation protein ScpB 3108994 4023289 RPD_2791 Rhodopseudomonas palustris BisB5 chromosome segregation and condensation protein ScpB YP_569920.1 3107825 R 316057 CDS YP_569921.1 91977262 4023290 complement(3109016..3109849) 1 NC_007958.1 chromosome segregation and condensation protein ScpA 3109849 4023290 RPD_2792 Rhodopseudomonas palustris BisB5 chromosome segregation and condensation protein ScpA YP_569921.1 3109016 R 316057 CDS YP_569922.1 91977263 4023291 complement(3109846..3110871) 1 NC_007958.1 Beta-N-acetylhexosaminidase 3110871 4023291 RPD_2793 Rhodopseudomonas palustris BisB5 Beta-N-acetylhexosaminidase YP_569922.1 3109846 R 316057 CDS YP_569923.1 91977264 4023292 complement(3110919..3112526) 1 NC_007958.1 hypothetical protein 3112526 4023292 RPD_2794 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569923.1 3110919 R 316057 CDS YP_569924.1 91977265 4023293 complement(3112629..3114422) 1 NC_007958.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 3114422 argS 4023293 argS Rhodopseudomonas palustris BisB5 arginyl-tRNA synthetase YP_569924.1 3112629 R 316057 CDS YP_569925.1 91977266 4023294 complement(3114471..3115685) 1 NC_007958.1 deoxyguanosinetriphosphate triphosphohydrolase 3115685 4023294 RPD_2796 Rhodopseudomonas palustris BisB5 deoxyguanosinetriphosphate triphosphohydrolase YP_569925.1 3114471 R 316057 CDS YP_569926.1 91977267 4023295 3115794..3116126 1 NC_007958.1 hypothetical protein 3116126 4023295 RPD_2797 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569926.1 3115794 D 316057 CDS YP_569927.1 91977268 4023296 3116405..3117424 1 NC_007958.1 hypothetical protein 3117424 4023296 RPD_2798 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569927.1 3116405 D 316057 CDS YP_569928.1 91977269 4023297 3117426..3118487 1 NC_007958.1 hypothetical protein 3118487 4023297 RPD_2799 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569928.1 3117426 D 316057 CDS YP_569929.1 91977270 4023298 complement(3118597..3119559) 1 NC_007958.1 hypothetical protein 3119559 4023298 RPD_2800 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569929.1 3118597 R 316057 CDS YP_569930.1 91977271 4023299 complement(3119744..3120103) 1 NC_007958.1 transcriptional regulators 3120103 4023299 RPD_2801 Rhodopseudomonas palustris BisB5 transcriptional regulators YP_569930.1 3119744 R 316057 CDS YP_569931.1 91977272 4023300 complement(3120348..3123476) 1 NC_007958.1 acriflavin resistance protein 3123476 4023300 RPD_2802 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_569931.1 3120348 R 316057 CDS YP_569932.1 91977273 4023301 complement(3123481..3124611) 1 NC_007958.1 secretion protein HlyD 3124611 4023301 RPD_2803 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_569932.1 3123481 R 316057 CDS YP_569933.1 91977274 4023302 3124760..3125551 1 NC_007958.1 exodeoxyribonuclease III 3125551 4023302 RPD_2804 Rhodopseudomonas palustris BisB5 exodeoxyribonuclease III YP_569933.1 3124760 D 316057 CDS YP_569934.1 91977275 4023303 complement(3125710..3126531) 1 NC_007958.1 hypothetical protein 3126531 4023303 RPD_2805 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569934.1 3125710 R 316057 CDS YP_569935.1 91977276 4023304 complement(3126518..3128242) 1 NC_007958.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 3128242 4023304 RPD_2806 Rhodopseudomonas palustris BisB5 dihydroxy-acid dehydratase YP_569935.1 3126518 R 316057 CDS YP_569936.1 91977277 4023305 complement(3128487..3129908) 1 NC_007958.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3129908 4023305 RPD_2807 Rhodopseudomonas palustris BisB5 dihydrolipoamide dehydrogenase YP_569936.1 3128487 R 316057 CDS YP_569937.1 91977278 4023306 complement(3129911..3130336) 1 NC_007958.1 hypothetical protein 3130336 4023306 RPD_2808 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569937.1 3129911 R 316057 CDS YP_569938.1 91977279 4023307 complement(3130398..3131819) 1 NC_007958.1 branched-chain alpha-keto acid dehydrogenase subunit E2 3131819 4023307 RPD_2809 Rhodopseudomonas palustris BisB5 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_569938.1 3130398 R 316057 CDS YP_569939.1 91977280 4023308 complement(3131831..3132127) 1 NC_007958.1 hypothetical protein 3132127 4023308 RPD_2810 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569939.1 3131831 R 316057 CDS YP_569940.1 91977281 4023309 complement(3132132..3133541) 1 NC_007958.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 3133541 4023309 RPD_2811 Rhodopseudomonas palustris BisB5 pyruvate dehydrogenase subunit beta YP_569940.1 3132132 R 316057 CDS YP_569941.1 91977282 4023310 complement(3133617..3134651) 1 NC_007958.1 pyruvate dehydrogenase (lipoamide) 3134651 4023310 RPD_2812 Rhodopseudomonas palustris BisB5 pyruvate dehydrogenase (lipoamide) YP_569941.1 3133617 R 316057 CDS YP_569942.1 91977283 4023311 complement(3134803..3135120) 1 NC_007958.1 septum formation initiator 3135120 4023311 RPD_2813 Rhodopseudomonas palustris BisB5 septum formation initiator YP_569942.1 3134803 R 316057 CDS YP_569943.1 91977284 4023312 3135347..3135961 1 NC_007958.1 lysine exporter protein LysE/YggA 3135961 4023312 RPD_2814 Rhodopseudomonas palustris BisB5 lysine exporter protein LysE/YggA YP_569943.1 3135347 D 316057 CDS YP_569944.1 91977285 4023313 complement(3135971..3137104) 1 NC_007958.1 alcohol dehydrogenase GroES-like protein 3137104 4023313 RPD_2815 Rhodopseudomonas palustris BisB5 alcohol dehydrogenase GroES-like protein YP_569944.1 3135971 R 316057 CDS YP_569945.1 91977286 4023314 complement(3137216..3138499) 1 NC_007958.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 3138499 eno 4023314 eno Rhodopseudomonas palustris BisB5 phosphopyruvate hydratase YP_569945.1 3137216 R 316057 CDS YP_569946.1 91977287 4023315 3138629..3139105 1 NC_007958.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3139105 4023315 RPD_2817 Rhodopseudomonas palustris BisB5 7-cyano-7-deazaguanine reductase YP_569946.1 3138629 D 316057 CDS YP_569947.1 91977288 4023316 complement(3139172..3140782) 1 NC_007958.1 hypothetical protein 3140782 4023316 RPD_2818 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569947.1 3139172 R 316057 CDS YP_569948.1 91977289 4023317 complement(3140940..3142166) 1 NC_007958.1 major facilitator transporter 3142166 4023317 RPD_2819 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_569948.1 3140940 R 316057 CDS YP_569949.1 91977290 4023318 complement(3142166..3143029) 1 NC_007958.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3143029 4023318 RPD_2820 Rhodopseudomonas palustris BisB5 2-dehydro-3-deoxyphosphooctonate aldolase YP_569949.1 3142166 R 316057 CDS YP_569950.1 91977291 4023319 complement(3143026..3143895) 1 NC_007958.1 hypothetical protein 3143895 4023319 RPD_2821 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569950.1 3143026 R 316057 CDS YP_569951.1 91977292 4023320 complement(3144166..3145023) 1 NC_007958.1 hypothetical protein 3145023 4023320 RPD_2822 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569951.1 3144166 R 316057 CDS YP_569952.1 91977293 4023321 3145227..3145568 1 NC_007958.1 hypothetical protein 3145568 4023321 RPD_2823 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569952.1 3145227 D 316057 CDS YP_569953.1 91977294 4023322 complement(3145575..3147206) 1 NC_007958.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3147206 pyrG 4023322 pyrG Rhodopseudomonas palustris BisB5 CTP synthetase YP_569953.1 3145575 R 316057 CDS YP_569954.1 91977295 4023323 complement(3147373..3147759) 1 NC_007958.1 preprotein translocase subunit SecG 3147759 secG 4023323 secG Rhodopseudomonas palustris BisB5 preprotein translocase subunit SecG YP_569954.1 3147373 R 316057 CDS YP_569955.1 91977296 4023324 complement(3147935..3148708) 1 NC_007958.1 triosephosphate isomerase 3148708 4023324 RPD_2826 Rhodopseudomonas palustris BisB5 triosephosphate isomerase YP_569955.1 3147935 R 316057 CDS YP_569956.1 91977297 4023325 3149001..3150902 1 NC_007958.1 PpiC-type peptidyl-prolyl cis-trans isomerase 3150902 4023325 RPD_2827 Rhodopseudomonas palustris BisB5 PpiC-type peptidyl-prolyl cis-trans isomerase YP_569956.1 3149001 D 316057 CDS YP_569957.1 91977298 4023326 3150942..3151958 1 NC_007958.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 3151958 trpD 4023326 trpD Rhodopseudomonas palustris BisB5 anthranilate phosphoribosyltransferase YP_569957.1 3150942 D 316057 CDS YP_569958.1 91977299 4023327 3151970..3152767 1 NC_007958.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 3152767 trpC 4023327 trpC Rhodopseudomonas palustris BisB5 indole-3-glycerol-phosphate synthase YP_569958.1 3151970 D 316057 CDS YP_569959.1 91977300 4023328 3152775..3153287 1 NC_007958.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 3153287 moaC 4023328 moaC Rhodopseudomonas palustris BisB5 molybdenum cofactor biosynthesis protein MoaC YP_569959.1 3152775 D 316057 CDS YP_569960.1 91977301 4023329 3153325..3155913 1 NC_007958.1 ATPase, E1-E2 type 3155913 4023329 RPD_2831 Rhodopseudomonas palustris BisB5 ATPase, E1-E2 type YP_569960.1 3153325 D 316057 CDS YP_569961.1 91977302 4023330 complement(3156076..3156549) 1 NC_007958.1 hypothetical protein 3156549 4023330 RPD_2832 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569961.1 3156076 R 316057 CDS YP_569962.1 91977303 4023331 3156919..3157167 1 NC_007958.1 type IV pilus assembly PilZ 3157167 4023331 RPD_2833 Rhodopseudomonas palustris BisB5 type IV pilus assembly PilZ YP_569962.1 3156919 D 316057 CDS YP_569963.1 91977304 4023332 complement(3157279..3158139) 1 NC_007958.1 OmpA/MotB 3158139 4023332 RPD_2834 Rhodopseudomonas palustris BisB5 OmpA/MotB YP_569963.1 3157279 R 316057 CDS YP_569964.1 91977305 4023333 3158315..3159010 1 NC_007958.1 HAD family hydrolase 3159010 4023333 RPD_2835 Rhodopseudomonas palustris BisB5 HAD family hydrolase YP_569964.1 3158315 D 316057 CDS YP_569965.1 91977306 4023334 3159043..3159537 1 NC_007958.1 hypothetical protein 3159537 4023334 RPD_2836 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569965.1 3159043 D 316057 CDS YP_569966.1 91977307 4023335 complement(3159552..3159899) 1 NC_007958.1 hypothetical protein 3159899 4023335 RPD_2837 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569966.1 3159552 R 316057 CDS YP_569967.1 91977308 4023336 3160137..3161348 1 NC_007958.1 MoeA-likedomain-containing protein 3161348 4023336 RPD_2838 Rhodopseudomonas palustris BisB5 MoeA-likedomain-containing protein YP_569967.1 3160137 D 316057 CDS YP_569968.1 91977309 4023337 3161524..3162231 1 NC_007958.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 3162231 4023337 RPD_2839 Rhodopseudomonas palustris BisB5 LexA repressor YP_569968.1 3161524 D 316057 CDS YP_569969.1 91977310 4023338 complement(3162265..3164559) 1 NC_007958.1 ComEC/Rec2-like protein 3164559 4023338 RPD_2840 Rhodopseudomonas palustris BisB5 ComEC/Rec2-like protein YP_569969.1 3162265 R 316057 CDS YP_569970.1 91977311 4023339 complement(3164635..3166320) 1 NC_007958.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 3166320 4023339 RPD_2841 Rhodopseudomonas palustris BisB5 glutaminyl-tRNA synthetase YP_569970.1 3164635 R 316057 CDS YP_569971.1 91977312 4023340 3166573..3167994 1 NC_007958.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3167994 gltX 4023340 gltX Rhodopseudomonas palustris BisB5 glutamyl-tRNA synthetase YP_569971.1 3166573 D 316057 CDS YP_569972.1 91977313 4023341 3168145..3169449 1 NC_007958.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 3169449 gltA 4023341 gltA Rhodopseudomonas palustris BisB5 type II citrate synthase YP_569972.1 3168145 D 316057 CDS YP_569973.1 91977314 4023342 complement(3169561..3170742) 1 NC_007958.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 3170742 lpxB 4023342 lpxB Rhodopseudomonas palustris BisB5 lipid-A-disaccharide synthase YP_569973.1 3169561 R 316057 CDS YP_569974.1 91977315 4023343 complement(3170739..3171596) 1 NC_007958.1 hypothetical protein 3171596 4023343 RPD_2845 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569974.1 3170739 R 316057 CDS YP_569975.1 91977316 4023344 complement(3171615..3172454) 1 NC_007958.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 3172454 4023344 RPD_2846 Rhodopseudomonas palustris BisB5 UDP-N-acetylglucosamine acyltransferase YP_569975.1 3171615 R 316057 CDS YP_569976.1 91977317 4023345 complement(3172465..3172920) 1 NC_007958.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3172920 fabZ 4023345 fabZ Rhodopseudomonas palustris BisB5 (3R)-hydroxymyristoyl-ACP dehydratase YP_569976.1 3172465 R 316057 CDS YP_569977.1 91977318 4023346 complement(3172920..3173999) 1 NC_007958.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3173999 lpxD 4023346 lpxD Rhodopseudomonas palustris BisB5 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_569977.1 3172920 R 316057 CDS YP_569978.1 91977319 4023347 complement(3174028..3176562) 1 NC_007958.1 surface antigen (D15) 3176562 4023347 RPD_2849 Rhodopseudomonas palustris BisB5 surface antigen (D15) YP_569978.1 3174028 R 316057 CDS YP_569979.1 91977320 4023348 complement(3176731..3177882) 1 NC_007958.1 peptidase M50 membrane-associated zinc metallopeptidase 3177882 4023348 RPD_2850 Rhodopseudomonas palustris BisB5 peptidase M50 membrane-associated zinc metallopeptidase YP_569979.1 3176731 R 316057 CDS YP_569980.1 91977321 4023349 complement(3177927..3179150) 1 NC_007958.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3179150 4023349 RPD_2851 Rhodopseudomonas palustris BisB5 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_569980.1 3177927 R 316057 CDS YP_569981.1 91977322 4023350 complement(3179155..3180003) 1 NC_007958.1 phosphatidate cytidylyltransferase 3180003 4023350 RPD_2852 Rhodopseudomonas palustris BisB5 phosphatidate cytidylyltransferase YP_569981.1 3179155 R 316057 CDS YP_569982.1 91977323 4023351 complement(3180009..3180767) 1 NC_007958.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 3180767 4023351 RPD_2853 Rhodopseudomonas palustris BisB5 undecaprenyl pyrophosphate synthase YP_569982.1 3180009 R 316057 CDS YP_569983.1 91977324 4023352 complement(3181025..3181588) 1 NC_007958.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 3181588 frr 4023352 frr Rhodopseudomonas palustris BisB5 ribosome recycling factor YP_569983.1 3181025 R 316057 CDS YP_569984.1 91977325 4023353 complement(3181641..3182357) 1 NC_007958.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 3182357 pyrH 4023353 pyrH Rhodopseudomonas palustris BisB5 uridylate kinase YP_569984.1 3181641 R 316057 CDS YP_569985.1 91977326 4023354 complement(3182430..3183356) 1 NC_007958.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 3183356 tsf 4023354 tsf Rhodopseudomonas palustris BisB5 elongation factor Ts YP_569985.1 3182430 R 316057 CDS YP_569986.1 91977327 4023355 complement(3183540..3184535) 1 NC_007958.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 3184535 rpsB 4023355 rpsB Rhodopseudomonas palustris BisB5 30S ribosomal protein S2 YP_569986.1 3183540 R 316057 CDS YP_569987.1 91977328 4023356 complement(3184743..3188198) 1 NC_007958.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 3188198 dnaE 4023356 dnaE Rhodopseudomonas palustris BisB5 DNA polymerase III subunit alpha YP_569987.1 3184743 R 316057 CDS YP_569988.1 91977329 4023357 complement(3188692..3189771) 1 NC_007958.1 hypothetical protein 3189771 4023357 RPD_2859 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569988.1 3188692 R 316057 CDS YP_569989.1 91977330 4023358 complement(3189846..3190499) 1 NC_007958.1 regulatory protein TetR 3190499 4023358 RPD_2860 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_569989.1 3189846 R 316057 CDS YP_569990.1 91977331 4023359 3190627..3190941 1 NC_007958.1 hypothetical protein 3190941 4023359 RPD_2861 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569990.1 3190627 D 316057 CDS YP_569991.1 91977332 4023360 3190938..3191216 1 NC_007958.1 hypothetical protein 3191216 4023360 RPD_2862 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569991.1 3190938 D 316057 CDS YP_569992.1 91977333 4023361 complement(3191271..3191969) 1 NC_007958.1 ABC transporter-like protein 3191969 4023361 RPD_2863 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_569992.1 3191271 R 316057 CDS YP_569993.1 91977334 4023362 complement(3191980..3193248) 1 NC_007958.1 LolC/E family lipoprotein releasing system, transmembrane protein 3193248 4023362 RPD_2864 Rhodopseudomonas palustris BisB5 LolC/E family lipoprotein releasing system, transmembrane protein YP_569993.1 3191980 R 316057 CDS YP_569994.1 91977335 4023363 complement(3193317..3194636) 1 NC_007958.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3194636 4023363 RPD_2865 Rhodopseudomonas palustris BisB5 prolyl-tRNA synthetase YP_569994.1 3193317 R 316057 CDS YP_569995.1 91977336 4023364 complement(3194912..3195433) 1 NC_007958.1 hypothetical protein 3195433 4023364 RPD_2866 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569995.1 3194912 R 316057 CDS YP_569996.1 91977337 4023365 complement(3195577..3195990) 1 NC_007958.1 hypothetical protein 3195990 4023365 RPD_2867 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569996.1 3195577 R 316057 CDS YP_569997.1 91977338 4023366 complement(3196504..3196788) 1 NC_007958.1 hypothetical protein 3196788 4023366 RPD_2868 Rhodopseudomonas palustris BisB5 hypothetical protein YP_569997.1 3196504 R 316057 CDS YP_569998.1 91977339 4023367 complement(3196789..3197193) 1 NC_007958.1 glyoxalase/bleomycin resistance protein/dioxygenase 3197193 4023367 RPD_2869 Rhodopseudomonas palustris BisB5 glyoxalase/bleomycin resistance protein/dioxygenase YP_569998.1 3196789 R 316057 CDS YP_569999.1 91977340 4023368 complement(3197330..3199000) 1 NC_007958.1 beta-lactamase-like protein 3199000 4023368 RPD_2870 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_569999.1 3197330 R 316057 CDS YP_570000.1 91977341 4023369 complement(3199000..3199809) 1 NC_007958.1 biotin--acetyl-CoA-carboxylase ligase 3199809 4023369 RPD_2871 Rhodopseudomonas palustris BisB5 biotin--acetyl-CoA-carboxylase ligase YP_570000.1 3199000 R 316057 CDS YP_570001.1 91977342 4023370 complement(3199810..3201246) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 3201246 4023370 RPD_2872 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit N YP_570001.1 3199810 R 316057 CDS YP_570002.1 91977343 4023371 complement(3201266..3202783) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 3202783 4023371 RPD_2873 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit M YP_570002.1 3201266 R 316057 CDS YP_570003.1 91977344 4023372 complement(3202783..3204876) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 3204876 4023372 RPD_2874 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit L YP_570003.1 3202783 R 316057 CDS YP_570004.1 91977345 4023373 complement(3204942..3205253) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 3205253 4023373 RPD_2875 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit K YP_570004.1 3204942 R 316057 CDS YP_570005.1 91977346 4023374 complement(3205250..3205888) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 3205888 4023374 RPD_2876 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit J YP_570005.1 3205250 R 316057 CDS YP_570006.1 91977347 4023375 complement(3205898..3206386) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 3206386 4023375 RPD_2877 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit I YP_570006.1 3205898 R 316057 CDS YP_570007.1 91977348 4023376 complement(3206394..3207419) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 3207419 4023376 RPD_2878 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit H YP_570007.1 3206394 R 316057 CDS YP_570008.1 91977349 4023377 complement(3207429..3209504) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 3209504 4023377 RPD_2879 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit G YP_570008.1 3207429 R 316057 CDS YP_570009.1 91977350 4023378 complement(3209510..3210835) 1 NC_007958.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 3210835 4023378 RPD_2880 Rhodopseudomonas palustris BisB5 NADH dehydrogenase I subunit F YP_570009.1 3209510 R 316057 CDS YP_570010.1 91977351 4023379 complement(3210854..3211018) 1 NC_007958.1 hypothetical protein 3211018 4023379 RPD_2881 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570010.1 3210854 R 316057 CDS YP_570011.1 91977352 4023380 complement(3211066..3211815) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 3211815 4023380 RPD_2882 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit E YP_570011.1 3211066 R 316057 CDS YP_570012.1 91977353 4023381 complement(3211818..3212789) 1 NC_007958.1 methyltransferase FkbM 3212789 4023381 RPD_2883 Rhodopseudomonas palustris BisB5 methyltransferase FkbM YP_570012.1 3211818 R 316057 CDS YP_570013.1 91977354 4023382 complement(3212786..3214036) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 3214036 4023382 RPD_2884 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit D YP_570013.1 3212786 R 316057 CDS YP_570014.1 91977355 4023383 complement(3214091..3214705) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 3214705 4023383 RPD_2885 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit C YP_570014.1 3214091 R 316057 CDS YP_570015.1 91977356 4023384 complement(3214719..3215318) 1 NC_007958.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3215318 4023384 RPD_2886 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit B YP_570015.1 3214719 R 316057 CDS YP_570016.1 91977357 4023385 complement(3215330..3215695) 1 NC_007958.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 3215695 4023385 RPD_2887 Rhodopseudomonas palustris BisB5 NADH dehydrogenase subunit A YP_570016.1 3215330 R 316057 CDS YP_570017.1 91977358 4023386 3216032..3216226 1 NC_007958.1 hypothetical protein 3216226 4023386 RPD_2888 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570017.1 3216032 D 316057 CDS YP_570018.1 91977359 4023388 3216892..3217203 1 NC_007958.1 histone-like DNA-binding protein 3217203 4023388 RPD_2889 Rhodopseudomonas palustris BisB5 histone-like DNA-binding protein YP_570018.1 3216892 D 316057 CDS YP_570019.1 91977360 4023389 3217294..3218586 1 NC_007958.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3218586 4023389 RPD_2890 Rhodopseudomonas palustris BisB5 peptidase T YP_570019.1 3217294 D 316057 CDS YP_570020.1 91977361 4023390 complement(3218803..3219087) 1 NC_007958.1 hypothetical protein 3219087 4023390 RPD_2891 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570020.1 3218803 R 316057 CDS YP_570021.1 91977362 4023392 complement(3219370..3221808) 1 NC_007958.1 ATP-dependent protease La 3221808 4023392 RPD_2892 Rhodopseudomonas palustris BisB5 ATP-dependent protease La YP_570021.1 3219370 R 316057 CDS YP_570022.1 91977363 4023393 complement(3222137..3223411) 1 NC_007958.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 3223411 clpX 4023393 clpX Rhodopseudomonas palustris BisB5 ATP-dependent protease ATP-binding subunit ClpX YP_570022.1 3222137 R 316057 CDS YP_570023.1 91977364 4023394 complement(3223798..3224442) 1 NC_007958.1 endopeptidase Clp 3224442 4023394 RPD_2894 Rhodopseudomonas palustris BisB5 endopeptidase Clp YP_570023.1 3223798 R 316057 CDS YP_570024.1 91977365 4023395 complement(3224764..3226125) 1 NC_007958.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 3226125 tig 4023395 tig Rhodopseudomonas palustris BisB5 trigger factor YP_570024.1 3224764 R 316057 CDS YP_570025.1 91977366 4023397 3226510..3227838 1 NC_007958.1 multicopper oxidase, type 2 3227838 4023397 RPD_2896 Rhodopseudomonas palustris BisB5 multicopper oxidase, type 2 YP_570025.1 3226510 D 316057 CDS YP_570026.1 91977367 4023398 3227885..3229945 1 NC_007958.1 para-aminobenzoate synthase, component I 3229945 4023398 RPD_2897 Rhodopseudomonas palustris BisB5 para-aminobenzoate synthase, component I YP_570026.1 3227885 D 316057 CDS YP_570027.1 91977368 4023399 3229957..3230769 1 NC_007958.1 class IV aminotransferase 3230769 4023399 RPD_2898 Rhodopseudomonas palustris BisB5 class IV aminotransferase YP_570027.1 3229957 D 316057 CDS YP_570028.1 91977369 4023400 complement(3230831..3232330) 1 NC_007958.1 hypothetical protein 3232330 4023400 RPD_2899 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570028.1 3230831 R 316057 CDS YP_570029.1 91977370 4023401 3232735..3233073 1 NC_007958.1 nitrogen regulatory protein P-II 3233073 4023401 RPD_2900 Rhodopseudomonas palustris BisB5 nitrogen regulatory protein P-II YP_570029.1 3232735 D 316057 CDS YP_570030.1 91977371 4023402 3233165..3234574 1 NC_007958.1 glutamine synthetase, type I 3234574 4023402 RPD_2901 Rhodopseudomonas palustris BisB5 glutamine synthetase, type I YP_570030.1 3233165 D 316057 CDS YP_570031.1 91977372 4023403 3234753..3235514 1 NC_007958.1 regulatory protein TetR 3235514 4023403 RPD_2902 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_570031.1 3234753 D 316057 CDS YP_570032.1 91977373 4023404 3235532..3236140 1 NC_007958.1 hypothetical protein 3236140 4023404 RPD_2903 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570032.1 3235532 D 316057 CDS YP_570033.1 91977374 4023405 complement(3236268..3236897) 1 NC_007958.1 hypothetical protein 3236897 4023405 RPD_2904 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570033.1 3236268 R 316057 CDS YP_570034.1 91977375 4023406 complement(3237004..3238428) 1 NC_007958.1 amidase 3238428 4023406 RPD_2905 Rhodopseudomonas palustris BisB5 amidase YP_570034.1 3237004 R 316057 CDS YP_570035.1 91977376 4023407 complement(3238481..3239470) 1 NC_007958.1 D-isomer specific 2-hydroxyacid dehydrogenase 3239470 4023407 RPD_2906 Rhodopseudomonas palustris BisB5 D-isomer specific 2-hydroxyacid dehydrogenase YP_570035.1 3238481 R 316057 CDS YP_570036.1 91977377 4023408 complement(3239506..3240606) 1 NC_007958.1 ABC transporter-like protein 3240606 4023408 RPD_2907 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570036.1 3239506 R 316057 CDS YP_570037.1 91977378 4023409 complement(3240611..3241522) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 3241522 4023409 RPD_2908 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_570037.1 3240611 R 316057 CDS YP_570038.1 91977379 4023410 complement(3241522..3242568) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 3242568 4023410 RPD_2909 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_570038.1 3241522 R 316057 CDS YP_570039.1 91977380 4023411 complement(3242593..3244065) 1 NC_007958.1 twin-arginine translocation pathway signal 3244065 4023411 RPD_2910 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_570039.1 3242593 R 316057 CDS YP_570040.1 91977381 4023412 complement(3244413..3245312) 1 NC_007958.1 hypothetical protein 3245312 4023412 RPD_2911 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570040.1 3244413 R 316057 CDS YP_570041.1 91977382 4023413 3245979..3249749 1 NC_007958.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3249749 4023413 RPD_2912 Rhodopseudomonas palustris BisB5 ribonucleotide-diphosphate reductase subunit alpha YP_570041.1 3245979 D 316057 CDS YP_570042.1 91977383 4023414 3249847..3250011 1 NC_007958.1 hypothetical protein 3250011 4023414 RPD_2913 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570042.1 3249847 D 316057 CDS YP_570043.1 91977384 4023415 3250131..3251081 1 NC_007958.1 hypothetical protein 3251081 4023415 RPD_2914 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570043.1 3250131 D 316057 CDS YP_570044.1 91977385 4023416 3251085..3251675 1 NC_007958.1 hypothetical protein 3251675 4023416 RPD_2915 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570044.1 3251085 D 316057 CDS YP_570045.1 91977386 4023417 3251940..3252188 1 NC_007958.1 hypothetical protein 3252188 4023417 RPD_2916 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570045.1 3251940 D 316057 CDS YP_570046.1 91977387 4023418 3252577..3253263 1 NC_007958.1 Male sterility-like 3253263 4023418 RPD_2917 Rhodopseudomonas palustris BisB5 Male sterility-like YP_570046.1 3252577 D 316057 CDS YP_570047.1 91977388 4023419 complement(3253318..3254895) 1 NC_007958.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 3254895 4023419 RPD_2918 Rhodopseudomonas palustris BisB5 cobyric acid synthase YP_570047.1 3253318 R 316057 CDS YP_570048.1 91977389 4023420 complement(3254892..3255593) 1 NC_007958.1 hypothetical protein 3255593 4023420 RPD_2919 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570048.1 3254892 R 316057 CDS YP_570049.1 91977390 4023423 3256772..3257134 1 NC_007958.1 hypothetical protein 3257134 4023423 RPD_2921 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570049.1 3256772 D 316057 CDS YP_570050.1 91977391 4023424 complement(3257169..3258056) 1 NC_007958.1 periplasmic binding protein 3258056 4023424 RPD_2922 Rhodopseudomonas palustris BisB5 periplasmic binding protein YP_570050.1 3257169 R 316057 CDS YP_570051.1 91977392 4023425 complement(3258053..3258835) 1 NC_007958.1 ABC transporter-like protein 3258835 4023425 RPD_2923 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570051.1 3258053 R 316057 CDS YP_570052.1 91977393 4023426 complement(3258832..3259842) 1 NC_007958.1 transport system permease 3259842 4023426 RPD_2924 Rhodopseudomonas palustris BisB5 transport system permease YP_570052.1 3258832 R 316057 CDS YP_570053.1 91977394 4023428 3260895..3262040 1 NC_007958.1 GGDEF domain-containing protein 3262040 4023428 RPD_2925 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_570053.1 3260895 D 316057 CDS YP_570054.1 91977395 4023429 3262220..3263098 1 NC_007958.1 YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; putative glutathione S-transferase YghU 3263098 4023429 RPD_2926 Rhodopseudomonas palustris BisB5 putative glutathione S-transferase YghU YP_570054.1 3262220 D 316057 CDS YP_570055.1 91977396 4023430 complement(3263164..3263661) 1 NC_007958.1 hypothetical protein 3263661 4023430 RPD_2927 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570055.1 3263164 R 316057 CDS YP_570056.1 91977397 4023431 complement(3263722..3264132) 1 NC_007958.1 hypothetical protein 3264132 4023431 RPD_2928 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570056.1 3263722 R 316057 CDS YP_570057.1 91977398 4023432 3264377..3264601 1 NC_007958.1 hypothetical protein 3264601 4023432 RPD_2929 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570057.1 3264377 D 316057 CDS YP_570058.1 91977399 4023433 3264650..3265324 1 NC_007958.1 abortive infection protein 3265324 4023433 RPD_2930 Rhodopseudomonas palustris BisB5 abortive infection protein YP_570058.1 3264650 D 316057 CDS YP_570059.1 91977400 4023434 complement(3265350..3265625) 1 NC_007958.1 hypothetical protein 3265625 4023434 RPD_2931 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570059.1 3265350 R 316057 CDS YP_570060.1 91977401 4023435 complement(3265987..3267849) 1 NC_007958.1 K+ potassium transporter 3267849 4023435 RPD_2932 Rhodopseudomonas palustris BisB5 K+ potassium transporter YP_570060.1 3265987 R 316057 CDS YP_570061.1 91977402 4023436 complement(3268231..3269094) 1 NC_007958.1 hypothetical protein 3269094 4023436 RPD_2933 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570061.1 3268231 R 316057 CDS YP_570062.1 91977403 4023437 3269853..3270026 1 NC_007958.1 hypothetical protein 3270026 4023437 RPD_2934 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570062.1 3269853 D 316057 CDS YP_570063.1 91977404 4023438 3270217..3270513 1 NC_007958.1 hypothetical protein 3270513 4023438 RPD_2935 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570063.1 3270217 D 316057 CDS YP_570064.1 91977405 4023439 complement(3270645..3271265) 1 NC_007958.1 GCN5-like N-acetyltransferase 3271265 4023439 RPD_2936 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_570064.1 3270645 R 316057 CDS YP_570065.1 91977406 4023440 complement(3271538..3271936) 1 NC_007958.1 phenylacetic acid degradation-like protein 3271936 4023440 RPD_2937 Rhodopseudomonas palustris BisB5 phenylacetic acid degradation-like protein YP_570065.1 3271538 R 316057 CDS YP_570066.1 91977407 4023441 complement(3272181..3273461) 1 NC_007958.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 3273461 4023441 RPD_2938 Rhodopseudomonas palustris BisB5 acetylornithine deacetylase YP_570066.1 3272181 R 316057 CDS YP_570067.1 91977408 4023442 3273591..3273854 1 NC_007958.1 hypothetical protein 3273854 4023442 RPD_2939 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570067.1 3273591 D 316057 CDS YP_570068.1 91977409 4023443 complement(3273902..3274225) 1 NC_007958.1 hypothetical protein 3274225 4023443 RPD_2940 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570068.1 3273902 R 316057 CDS YP_570069.1 91977410 4023444 complement(3275449..3275997) 1 NC_007958.1 CreA 3275997 4023444 RPD_2941 Rhodopseudomonas palustris BisB5 CreA YP_570069.1 3275449 R 316057 CDS YP_570070.1 91977411 4023445 3276217..3277944 1 NC_007958.1 hypothetical protein 3277944 4023445 RPD_2942 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570070.1 3276217 D 316057 CDS YP_570071.1 91977412 4023446 3278169..3279110 1 NC_007958.1 polysaccharide deacetylase 3279110 4023446 RPD_2943 Rhodopseudomonas palustris BisB5 polysaccharide deacetylase YP_570071.1 3278169 D 316057 CDS YP_570072.1 91977413 4023447 3279150..3279713 1 NC_007958.1 hypothetical protein 3279713 4023447 RPD_2944 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570072.1 3279150 D 316057 CDS YP_570073.1 91977414 4023448 complement(3279717..3280169) 1 NC_007958.1 DoxX 3280169 4023448 RPD_2945 Rhodopseudomonas palustris BisB5 DoxX YP_570073.1 3279717 R 316057 CDS YP_570074.1 91977415 4023449 complement(3280313..3282622) 1 NC_007958.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3282622 4023449 RPD_2946 Rhodopseudomonas palustris BisB5 malic enzyme YP_570074.1 3280313 R 316057 CDS YP_570075.1 91977416 4023450 complement(3282675..3284447) 1 NC_007958.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 3284447 aspS 4023450 aspS Rhodopseudomonas palustris BisB5 aspartyl-tRNA synthetase YP_570075.1 3282675 R 316057 CDS YP_570076.1 91977417 4023451 3284718..3286196 1 NC_007958.1 hypothetical protein 3286196 4023451 RPD_2948 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570076.1 3284718 D 316057 CDS YP_570077.1 91977418 4023452 3286310..3287488 1 NC_007958.1 ribonuclease D 3287488 4023452 RPD_2949 Rhodopseudomonas palustris BisB5 ribonuclease D YP_570077.1 3286310 D 316057 CDS YP_570078.1 91977419 4023453 3287485..3288408 1 NC_007958.1 hypothetical protein 3288408 4023453 RPD_2950 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570078.1 3287485 D 316057 CDS YP_570079.1 91977420 4023454 complement(3288425..3289930) 1 NC_007958.1 Ppx/GppA phosphatase 3289930 4023454 RPD_2951 Rhodopseudomonas palustris BisB5 Ppx/GppA phosphatase YP_570079.1 3288425 R 316057 CDS YP_570080.1 91977421 4023455 complement(3289943..3292222) 1 NC_007958.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3292222 4023455 RPD_2952 Rhodopseudomonas palustris BisB5 polyphosphate kinase YP_570080.1 3289943 R 316057 CDS YP_570081.1 91977422 4023456 complement(3292286..3292963) 1 NC_007958.1 hypothetical protein 3292963 4023456 RPD_2953 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570081.1 3292286 R 316057 CDS YP_570082.1 91977423 4023457 complement(3293010..3293639) 1 NC_007958.1 CDP-alcohol phosphatidyltransferase 3293639 4023457 RPD_2954 Rhodopseudomonas palustris BisB5 CDP-alcohol phosphatidyltransferase YP_570082.1 3293010 R 316057 CDS YP_570083.1 91977424 4023458 3293822..3294895 1 NC_007958.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3294895 4023458 RPD_2955 Rhodopseudomonas palustris BisB5 phosphoribosylaminoimidazole synthetase YP_570083.1 3293822 D 316057 CDS YP_570084.1 91977425 4023459 3294901..3295548 1 NC_007958.1 phosphoribosylglycinamide formyltransferase 3295548 4023459 RPD_2956 Rhodopseudomonas palustris BisB5 phosphoribosylglycinamide formyltransferase YP_570084.1 3294901 D 316057 CDS YP_570085.1 91977426 4023460 complement(3295614..3295817) 1 NC_007958.1 cold-shock DNA-binding domain-containing protein 3295817 4023460 RPD_2957 Rhodopseudomonas palustris BisB5 cold-shock DNA-binding domain-containing protein YP_570085.1 3295614 R 316057 CDS YP_570086.1 91977427 4023461 3296352..3297098 1 NC_007958.1 cyclic nucleotide-binding protein 3297098 4023461 RPD_2958 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_570086.1 3296352 D 316057 CDS YP_570087.1 91977428 4023463 complement(3297342..3297752) 1 NC_007958.1 hypothetical protein 3297752 4023463 RPD_2960 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570087.1 3297342 R 316057 CDS YP_570088.1 91977429 4023464 complement(3298043..3298465) 1 NC_007958.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 3298465 ndk 4023464 ndk Rhodopseudomonas palustris BisB5 nucleoside diphosphate kinase YP_570088.1 3298043 R 316057 CDS YP_570089.1 91977430 4023465 3298641..3300500 1 NC_007958.1 ABC transporter-like protein 3300500 4023465 RPD_2962 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570089.1 3298641 D 316057 CDS YP_570090.1 91977431 4023466 complement(3300541..3301086) 1 NC_007958.1 hypothetical protein 3301086 4023466 RPD_2963 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570090.1 3300541 R 316057 CDS YP_570091.1 91977432 4023467 complement(3301206..3301658) 1 NC_007958.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 3301658 4023467 RPD_2964 Rhodopseudomonas palustris BisB5 DNA polymerase III subunit chi YP_570091.1 3301206 R 316057 CDS YP_570092.1 91977433 4023468 complement(3301674..3303176) 1 NC_007958.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 3303176 4023468 RPD_2965 Rhodopseudomonas palustris BisB5 leucyl aminopeptidase YP_570092.1 3301674 R 316057 CDS YP_570093.1 91977434 4023469 3303598..3304764 1 NC_007958.1 permease YjgP/YjgQ 3304764 4023469 RPD_2966 Rhodopseudomonas palustris BisB5 permease YjgP/YjgQ YP_570093.1 3303598 D 316057 CDS YP_570094.1 91977435 4023470 3304778..3305863 1 NC_007958.1 permease YjgP/YjgQ 3305863 4023470 RPD_2967 Rhodopseudomonas palustris BisB5 permease YjgP/YjgQ YP_570094.1 3304778 D 316057 CDS YP_570095.1 91977436 4023471 3305869..3308370 1 NC_007958.1 organic solvent tolerance protein 3308370 4023471 RPD_2968 Rhodopseudomonas palustris BisB5 organic solvent tolerance protein YP_570095.1 3305869 D 316057 CDS YP_570096.1 91977437 4023472 3308439..3309368 1 NC_007958.1 hypothetical protein 3309368 4023472 RPD_2969 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570096.1 3308439 D 316057 CDS YP_570097.1 91977438 4023473 3309468..3310472 1 NC_007958.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 3310472 pdxA 4023473 pdxA Rhodopseudomonas palustris BisB5 4-hydroxythreonine-4-phosphate dehydrogenase YP_570097.1 3309468 D 316057 CDS YP_570098.1 91977439 4023474 3310469..3311332 1 NC_007958.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 3311332 ksgA 4023474 ksgA Rhodopseudomonas palustris BisB5 dimethyladenosine transferase YP_570098.1 3310469 D 316057 CDS YP_570099.1 91977440 4023475 3311348..3312406 1 NC_007958.1 alcohol dehydrogenase GroES-like protein 3312406 4023475 RPD_2972 Rhodopseudomonas palustris BisB5 alcohol dehydrogenase GroES-like protein YP_570099.1 3311348 D 316057 CDS YP_570100.1 91977441 4023476 3312588..3313613 1 NC_007958.1 hypothetical protein 3313613 4023476 RPD_2973 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570100.1 3312588 D 316057 CDS YP_570101.1 91977442 4023477 complement(3313669..3314328) 1 NC_007958.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3314328 gmk 4023477 gmk Rhodopseudomonas palustris BisB5 guanylate kinase YP_570101.1 3313669 R 316057 CDS YP_570102.1 91977443 4023478 complement(3314331..3315218) 1 NC_007958.1 hypothetical protein 3315218 4023478 RPD_2975 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570102.1 3314331 R 316057 CDS YP_570103.1 91977444 4023479 complement(3315413..3316690) 1 NC_007958.1 aminodeoxychorismate lyase 3316690 4023479 RPD_2976 Rhodopseudomonas palustris BisB5 aminodeoxychorismate lyase YP_570103.1 3315413 R 316057 CDS YP_570104.1 91977445 4023480 complement(3316893..3318158) 1 NC_007958.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 3318158 4023480 RPD_2977 Rhodopseudomonas palustris BisB5 3-oxoacyl-(acyl carrier protein) synthase II YP_570104.1 3316893 R 316057 CDS YP_570105.1 91977446 4023481 complement(3318255..3318494) 1 NC_007958.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 3318494 acpP 4023481 acpP Rhodopseudomonas palustris BisB5 acyl carrier protein YP_570105.1 3318255 R 316057 CDS YP_570106.1 91977447 4023482 complement(3318794..3319531) 1 NC_007958.1 3-oxoacyl-(acyl-carrier-protein) reductase 3319531 4023482 RPD_2979 Rhodopseudomonas palustris BisB5 3-oxoacyl-(acyl-carrier-protein) reductase YP_570106.1 3318794 R 316057 CDS YP_570107.1 91977448 4023483 3319712..3321124 1 NC_007958.1 ethanolamine permease 3321124 4023483 RPD_2980 Rhodopseudomonas palustris BisB5 ethanolamine permease YP_570107.1 3319712 D 316057 CDS YP_570108.1 91977449 4023484 3321148..3322542 1 NC_007958.1 ethanolamine ammonia lyase large subunit 3322542 4023484 RPD_2981 Rhodopseudomonas palustris BisB5 ethanolamine ammonia lyase large subunit YP_570108.1 3321148 D 316057 CDS YP_570109.1 91977450 4023485 3322539..3323354 1 NC_007958.1 catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 3323354 4023485 RPD_2982 Rhodopseudomonas palustris BisB5 ethanolamine ammonia-lyase small subunit YP_570109.1 3322539 D 316057 CDS YP_570110.1 91977451 4023486 complement(3323479..3324432) 1 NC_007958.1 malonyl CoA-acyl carrier protein transacylase 3324432 4023486 RPD_2983 Rhodopseudomonas palustris BisB5 malonyl CoA-acyl carrier protein transacylase YP_570110.1 3323479 R 316057 CDS YP_570111.1 91977452 4023487 3324546..3325997 1 NC_007958.1 GGDEF domain-containing protein 3325997 4023487 RPD_2984 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_570111.1 3324546 D 316057 CDS YP_570112.1 91977453 4023488 3326284..3326766 1 NC_007958.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 3326766 rpsF 4023488 rpsF Rhodopseudomonas palustris BisB5 30S ribosomal protein S6 YP_570112.1 3326284 D 316057 CDS YP_570113.1 91977454 4023489 3326772..3327011 1 NC_007958.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 3327011 rpsR 4023489 rpsR Rhodopseudomonas palustris BisB5 30S ribosomal protein S18 YP_570113.1 3326772 D 316057 CDS YP_570114.1 91977455 4023490 3327142..3328089 1 NC_007958.1 hypothetical protein 3328089 4023490 RPD_2987 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570114.1 3327142 D 316057 CDS YP_570115.1 91977456 4023491 3328125..3328709 1 NC_007958.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 3328709 rplI 4023491 rplI Rhodopseudomonas palustris BisB5 50S ribosomal protein L9 YP_570115.1 3328125 D 316057 CDS YP_570116.1 91977457 4023492 complement(3328784..3329905) 1 NC_007958.1 hypothetical protein 3329905 4023492 RPD_2989 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570116.1 3328784 R 316057 CDS YP_570117.1 91977458 4023493 complement(3330275..3330475) 1 NC_007958.1 hypothetical protein 3330475 4023493 RPD_2990 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570117.1 3330275 R 316057 CDS YP_570118.1 91977459 4023494 3330985..3332481 1 NC_007958.1 unwinds double stranded DNA; replicative DNA helicase 3332481 4023494 RPD_2991 Rhodopseudomonas palustris BisB5 replicative DNA helicase YP_570118.1 3330985 D 316057 CDS YP_570119.1 91977460 4023495 3332532..3333761 1 NC_007958.1 alanine racemase 3333761 4023495 RPD_2992 Rhodopseudomonas palustris BisB5 alanine racemase YP_570119.1 3332532 D 316057 CDS YP_570120.1 91977461 4023496 complement(3333793..3334047) 1 NC_007958.1 hypothetical protein 3334047 4023496 RPD_2993 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570120.1 3333793 R 316057 CDS YP_570121.1 91977462 4023497 complement(3334063..3335274) 1 NC_007958.1 hypothetical protein 3335274 4023497 RPD_2994 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570121.1 3334063 R 316057 CDS YP_570122.1 91977463 4023498 3335356..3336843 1 NC_007958.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 3336843 4023498 RPD_2995 Rhodopseudomonas palustris BisB5 DNA repair protein RadA YP_570122.1 3335356 D 316057 CDS YP_570123.1 91977464 4023499 3337057..3337689 1 NC_007958.1 colicin V production protein 3337689 4023499 RPD_2996 Rhodopseudomonas palustris BisB5 colicin V production protein YP_570123.1 3337057 D 316057 CDS YP_570124.1 91977465 4023500 3337713..3339257 1 NC_007958.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 3339257 4023500 RPD_2997 Rhodopseudomonas palustris BisB5 amidophosphoribosyltransferase YP_570124.1 3337713 D 316057 CDS YP_570125.1 91977466 4023501 3339430..3340173 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 3340173 4023501 RPD_2998 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570125.1 3339430 D 316057 CDS YP_570126.1 91977467 4023502 3340256..3341482 1 NC_007958.1 putative urea/short-chain binding protein of ABC transporter 3341482 4023502 RPD_2999 Rhodopseudomonas palustris BisB5 putative urea/short-chain binding protein of ABC transporter YP_570126.1 3340256 D 316057 CDS YP_570127.1 91977468 4023503 complement(3341569..3341913) 1 NC_007958.1 GCN5-like N-acetyltransferase 3341913 4023503 RPD_3000 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_570127.1 3341569 R 316057 CDS YP_570128.1 91977469 4023504 3342311..3342589 1 NC_007958.1 hypothetical protein 3342589 4023504 RPD_3001 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570128.1 3342311 D 316057 CDS YP_570129.1 91977470 4023505 complement(3342670..3343302) 1 NC_007958.1 phage tail Collar 3343302 4023505 RPD_3002 Rhodopseudomonas palustris BisB5 phage tail Collar YP_570129.1 3342670 R 316057 CDS YP_570130.1 91977471 4023506 3343763..3348850 1 NC_007958.1 outer membrane autotransporter barrel domain-containing protein 3348850 4023506 RPD_3003 Rhodopseudomonas palustris BisB5 outer membrane autotransporter barrel domain-containing protein YP_570130.1 3343763 D 316057 CDS YP_570131.1 91977472 4023507 complement(3348891..3350156) 1 NC_007958.1 major facilitator transporter 3350156 4023507 RPD_3004 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_570131.1 3348891 R 316057 CDS YP_570132.1 91977473 4023508 complement(3350153..3351535) 1 NC_007958.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3351535 engA 4023508 engA Rhodopseudomonas palustris BisB5 GTP-binding protein EngA YP_570132.1 3350153 R 316057 CDS YP_570133.1 91977474 4023509 complement(3351609..3352148) 1 NC_007958.1 hypothetical protein 3352148 4023509 RPD_3006 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570133.1 3351609 R 316057 CDS YP_570134.1 91977475 4023510 complement(3352203..3352856) 1 NC_007958.1 hypothetical protein 3352856 4023510 RPD_3007 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570134.1 3352203 R 316057 CDS YP_570135.1 91977476 4023511 complement(3353018..3353842) 1 NC_007958.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3353842 panB 4023511 panB Rhodopseudomonas palustris BisB5 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_570135.1 3353018 R 316057 CDS YP_570136.1 91977477 4023512 complement(3353846..3354430) 1 NC_007958.1 NnrU 3354430 4023512 RPD_3009 Rhodopseudomonas palustris BisB5 NnrU YP_570136.1 3353846 R 316057 CDS YP_570137.1 91977478 4023513 3354571..3355575 1 NC_007958.1 twin-arginine translocation pathway signal 3355575 4023513 RPD_3010 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_570137.1 3354571 D 316057 CDS YP_570138.1 91977479 4023514 complement(3355642..3356088) 1 NC_007958.1 hypothetical protein 3356088 4023514 RPD_3011 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570138.1 3355642 R 316057 CDS YP_570139.1 91977480 4023515 complement(3356225..3356503) 1 NC_007958.1 hypothetical protein 3356503 4023515 RPD_3012 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570139.1 3356225 R 316057 CDS YP_570140.1 91977481 4023516 complement(3357197..3357373) 1 NC_007958.1 hypothetical protein 3357373 4023516 RPD_3013 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570140.1 3357197 R 316057 CDS YP_570141.1 91977482 4023517 complement(3357832..3359316) 1 NC_007958.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 3359316 gatB 4023517 gatB Rhodopseudomonas palustris BisB5 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_570141.1 3357832 R 316057 CDS YP_570142.1 91977483 4023518 complement(3359446..3360546) 1 NC_007958.1 histidine kinase, dimerisation/phosphoacceptor 3360546 4023518 RPD_3015 Rhodopseudomonas palustris BisB5 histidine kinase, dimerisation/phosphoacceptor YP_570142.1 3359446 R 316057 CDS YP_570143.1 91977484 4023519 complement(3360632..3362110) 1 NC_007958.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 3362110 gatA 4023519 gatA Rhodopseudomonas palustris BisB5 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_570143.1 3360632 R 316057 CDS YP_570144.1 91977485 4023520 complement(3362250..3362456) 1 NC_007958.1 hypothetical protein 3362456 4023520 RPD_3017 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570144.1 3362250 R 316057 CDS YP_570145.1 91977486 4023521 complement(3362534..3362821) 1 NC_007958.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 3362821 gatC 4023521 gatC Rhodopseudomonas palustris BisB5 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_570145.1 3362534 R 316057 CDS YP_570146.1 91977487 4023522 complement(3362909..3363985) 1 NC_007958.1 2-nitropropane dioxygenase 3363985 4023522 RPD_3019 Rhodopseudomonas palustris BisB5 2-nitropropane dioxygenase YP_570146.1 3362909 R 316057 CDS YP_570147.1 91977488 4023523 3364326..3365261 1 NC_007958.1 putative cyclase 3365261 4023523 RPD_3020 Rhodopseudomonas palustris BisB5 putative cyclase YP_570147.1 3364326 D 316057 CDS YP_570148.1 91977489 4023524 complement(3365300..3365917) 1 NC_007958.1 regulatory protein TetR 3365917 4023524 RPD_3021 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_570148.1 3365300 R 316057 CDS YP_570149.1 91977490 4023525 complement(3365987..3367972) 1 NC_007958.1 in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 3367972 4023525 RPD_3022 Rhodopseudomonas palustris BisB5 myosin-cross-reactive antigen YP_570149.1 3365987 R 316057 CDS YP_570150.1 91977491 4023526 3368197..3368679 1 NC_007958.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3368679 4023526 RPD_3023 Rhodopseudomonas palustris BisB5 Holliday junction resolvase-like protein YP_570150.1 3368197 D 316057 CDS YP_570151.1 91977492 4023527 3368726..3369112 1 NC_007958.1 SEC-C protein 3369112 4023527 RPD_3024 Rhodopseudomonas palustris BisB5 SEC-C protein YP_570151.1 3368726 D 316057 CDS YP_570152.1 91977493 4023528 complement(3369205..3370860) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 3370860 4023528 RPD_3025 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570152.1 3369205 R 316057 CDS YP_570153.1 91977494 4023529 complement(3370980..3371696) 1 NC_007958.1 peptidase M15D, vanX D-ala-D-ala dipeptidase 3371696 4023529 RPD_3026 Rhodopseudomonas palustris BisB5 peptidase M15D, vanX D-ala-D-ala dipeptidase YP_570153.1 3370980 R 316057 CDS YP_570154.1 91977495 4023530 complement(3371750..3373381) 1 NC_007958.1 thiamine pyrophosphate enzyme-like protein 3373381 4023530 RPD_3027 Rhodopseudomonas palustris BisB5 thiamine pyrophosphate enzyme-like protein YP_570154.1 3371750 R 316057 CDS YP_570155.1 91977496 4023531 3373564..3374517 1 NC_007958.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 3374517 pyrB 4023531 pyrB Rhodopseudomonas palustris BisB5 aspartate carbamoyltransferase catalytic subunit YP_570155.1 3373564 D 316057 CDS YP_570156.1 91977497 4023532 3374537..3375838 1 NC_007958.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 3375838 4023532 RPD_3029 Rhodopseudomonas palustris BisB5 dihydroorotase YP_570156.1 3374537 D 316057 CDS YP_570157.1 91977498 4023533 3375858..3376448 1 NC_007958.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 3376448 4023533 RPD_3030 Rhodopseudomonas palustris BisB5 putative glycerol-3-phosphate acyltransferase PlsY YP_570157.1 3375858 D 316057 CDS YP_570158.1 91977499 4023534 3376534..3377802 1 NC_007958.1 DNA processing protein DprA 3377802 4023534 RPD_3031 Rhodopseudomonas palustris BisB5 DNA processing protein DprA YP_570158.1 3376534 D 316057 CDS YP_570159.1 91977500 4023535 complement(3378375..3378584) 1 NC_007958.1 hypothetical protein 3378584 4023535 RPD_3032 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570159.1 3378375 R 316057 CDS YP_570160.1 91977501 4023536 3378832..3381576 1 NC_007958.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 3381576 4023536 RPD_3033 Rhodopseudomonas palustris BisB5 DNA topoisomerase I YP_570160.1 3378832 D 316057 CDS YP_570161.1 91977502 4023537 3381579..3383924 1 NC_007958.1 ribonuclease R 3383924 4023537 RPD_3034 Rhodopseudomonas palustris BisB5 ribonuclease R YP_570161.1 3381579 D 316057 CDS YP_570162.1 91977503 4023538 3383921..3384352 1 NC_007958.1 hypothetical protein 3384352 4023538 RPD_3035 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570162.1 3383921 D 316057 CDS YP_570163.1 91977504 4023539 3384458..3385213 1 NC_007958.1 NUDIX hydrolase 3385213 4023539 RPD_3036 Rhodopseudomonas palustris BisB5 NUDIX hydrolase YP_570163.1 3384458 D 316057 CDS YP_570164.1 91977505 4023540 3385444..3385611 1 NC_007958.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3385611 rpmG 4023540 rpmG Rhodopseudomonas palustris BisB5 50S ribosomal protein L33 YP_570164.1 3385444 D 316057 CDS YP_570165.1 91977506 4023541 complement(3385864..3387237) 1 NC_007958.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; response regulator PleD 3387237 pleD 4023541 pleD Rhodopseudomonas palustris BisB5 response regulator PleD YP_570165.1 3385864 R 316057 CDS YP_570166.1 91977507 4023542 complement(3387247..3387612) 1 NC_007958.1 response regulator receiver 3387612 4023542 RPD_3039 Rhodopseudomonas palustris BisB5 response regulator receiver YP_570166.1 3387247 R 316057 CDS YP_570167.1 91977508 4023543 3387755..3388054 1 NC_007958.1 hypothetical protein 3388054 4023543 RPD_3040 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570167.1 3387755 D 316057 CDS YP_570168.1 91977509 4023544 3388051..3389340 1 NC_007958.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 3389340 4023544 RPD_3041 Rhodopseudomonas palustris BisB5 DNA polymerase IV YP_570168.1 3388051 D 316057 CDS YP_570169.1 91977510 4023545 complement(3389501..3390322) 1 NC_007958.1 hypothetical protein 3390322 4023545 RPD_3042 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570169.1 3389501 R 316057 CDS YP_570170.1 91977511 4023546 3390659..3391126 1 NC_007958.1 endoribonuclease L-PSP 3391126 4023546 RPD_3043 Rhodopseudomonas palustris BisB5 endoribonuclease L-PSP YP_570170.1 3390659 D 316057 CDS YP_570171.1 91977512 4023547 3391142..3391894 1 NC_007958.1 glycerophosphoryl diester phosphodiesterase 3391894 4023547 RPD_3044 Rhodopseudomonas palustris BisB5 glycerophosphoryl diester phosphodiesterase YP_570171.1 3391142 D 316057 CDS YP_570172.1 91977513 4023548 3391988..3393223 1 NC_007958.1 hypothetical protein 3393223 4023548 RPD_3045 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570172.1 3391988 D 316057 CDS YP_570173.1 91977514 4023549 3393272..3393700 1 NC_007958.1 histidine triad (HIT) protein 3393700 4023549 RPD_3046 Rhodopseudomonas palustris BisB5 histidine triad (HIT) protein YP_570173.1 3393272 D 316057 CDS YP_570174.1 91977515 4023550 complement(3393710..3394171) 1 NC_007958.1 hypothetical protein 3394171 4023550 RPD_3047 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570174.1 3393710 R 316057 CDS YP_570175.1 91977516 4023551 complement(3394251..3394595) 1 NC_007958.1 hypothetical protein 3394595 4023551 RPD_3048 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570175.1 3394251 R 316057 CDS YP_570176.1 91977517 4023552 complement(3394592..3395332) 1 NC_007958.1 AzlC-like protein 3395332 4023552 RPD_3049 Rhodopseudomonas palustris BisB5 AzlC-like protein YP_570176.1 3394592 R 316057 CDS YP_570177.1 91977518 4023553 3395483..3395842 1 NC_007958.1 type IV pilus assembly PilZ 3395842 4023553 RPD_3050 Rhodopseudomonas palustris BisB5 type IV pilus assembly PilZ YP_570177.1 3395483 D 316057 CDS YP_570178.1 91977519 4023554 complement(3395860..3396903) 1 NC_007958.1 lytic transglycosylase 3396903 4023554 RPD_3051 Rhodopseudomonas palustris BisB5 lytic transglycosylase YP_570178.1 3395860 R 316057 CDS YP_570179.1 91977520 4023555 3396994..3397926 1 NC_007958.1 hypothetical protein 3397926 4023555 RPD_3052 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570179.1 3396994 D 316057 CDS YP_570180.1 91977521 4023556 3398035..3398379 1 NC_007958.1 type IV pilus assembly PilZ 3398379 4023556 RPD_3053 Rhodopseudomonas palustris BisB5 type IV pilus assembly PilZ YP_570180.1 3398035 D 316057 CDS YP_570181.1 91977522 4023557 3398496..3400430 1 NC_007958.1 glycosyltransferase 3400430 4023557 RPD_3054 Rhodopseudomonas palustris BisB5 glycosyltransferase YP_570181.1 3398496 D 316057 CDS YP_570182.1 91977523 4023558 complement(3400601..3403006) 1 NC_007958.1 ATPase 3403006 4023558 RPD_3055 Rhodopseudomonas palustris BisB5 ATPase YP_570182.1 3400601 R 316057 CDS YP_570183.1 91977524 4023559 complement(3403204..3403533) 1 NC_007958.1 ATP-dependent Clp protease adaptor protein ClpS 3403533 4023559 RPD_3056 Rhodopseudomonas palustris BisB5 ATP-dependent Clp protease adaptor protein ClpS YP_570183.1 3403204 R 316057 CDS YP_570184.1 91977525 4023560 3403994..3405388 1 NC_007958.1 hypothetical protein 3405388 4023560 RPD_3057 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570184.1 3403994 D 316057 CDS YP_570185.1 91977526 4023561 3405827..3407563 1 NC_007958.1 Serine-type D-Ala-D-Ala carboxypeptidase 3407563 4023561 RPD_3058 Rhodopseudomonas palustris BisB5 Serine-type D-Ala-D-Ala carboxypeptidase YP_570185.1 3405827 D 316057 CDS YP_570186.1 91977527 4023562 complement(3407808..3408536) 1 NC_007958.1 heat shock protein DnaJ-like 3408536 4023562 RPD_3059 Rhodopseudomonas palustris BisB5 heat shock protein DnaJ-like YP_570186.1 3407808 R 316057 CDS YP_570187.1 91977528 4023563 complement(3408680..3409420) 1 NC_007958.1 hypothetical protein 3409420 4023563 RPD_3060 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570187.1 3408680 R 316057 CDS YP_570188.1 91977529 4023564 complement(3409513..3410340) 1 NC_007958.1 hypothetical protein 3410340 4023564 RPD_3061 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570188.1 3409513 R 316057 CDS YP_570189.1 91977530 4023565 complement(3410610..3411533) 1 NC_007958.1 putative chromosome partitioning protein ParA 3411533 4023565 RPD_3062 Rhodopseudomonas palustris BisB5 putative chromosome partitioning protein ParA YP_570189.1 3410610 R 316057 CDS YP_570190.1 91977531 4023566 3411762..3412613 1 NC_007958.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 3412613 panC 4023566 panC Rhodopseudomonas palustris BisB5 pantoate--beta-alanine ligase YP_570190.1 3411762 D 316057 CDS YP_570191.1 91977532 4023567 complement(3412663..3413097) 1 NC_007958.1 hypothetical protein 3413097 4023567 RPD_3064 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570191.1 3412663 R 316057 CDS YP_570192.1 91977533 4023568 complement(3413122..3415482) 1 NC_007958.1 TonB-dependent receptor 3415482 4023568 RPD_3065 Rhodopseudomonas palustris BisB5 TonB-dependent receptor YP_570192.1 3413122 R 316057 CDS YP_570193.1 91977534 4023569 3415841..3416563 1 NC_007958.1 cyclic nucleotide-binding protein 3416563 4023569 RPD_3066 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_570193.1 3415841 D 316057 CDS YP_570194.1 91977535 4023570 complement(3416692..3417129) 1 NC_007958.1 hypothetical protein 3417129 4023570 RPD_3067 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570194.1 3416692 R 316057 CDS YP_570195.1 91977536 4023571 complement(3417166..3418209) 1 NC_007958.1 hypothetical protein 3418209 4023571 RPD_3068 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570195.1 3417166 R 316057 CDS YP_570196.1 91977537 4023572 complement(3418375..3418599) 1 NC_007958.1 hypothetical protein 3418599 4023572 RPD_3069 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570196.1 3418375 R 316057 CDS YP_570197.1 91977538 4023573 complement(3418775..3419431) 1 NC_007958.1 glutathione S-transferase-like protein 3419431 4023573 RPD_3070 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_570197.1 3418775 R 316057 CDS YP_570198.1 91977539 4023574 3419646..3419921 1 NC_007958.1 hypothetical protein 3419921 4023574 RPD_3071 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570198.1 3419646 D 316057 CDS YP_570199.1 91977540 4023575 complement(3419990..3420784) 1 NC_007958.1 hypothetical protein 3420784 4023575 RPD_3072 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570199.1 3419990 R 316057 CDS YP_570200.1 91977541 4023576 complement(3420861..3421679) 1 NC_007958.1 2,5-didehydrogluconate reductase 3421679 4023576 RPD_3073 Rhodopseudomonas palustris BisB5 2,5-didehydrogluconate reductase YP_570200.1 3420861 R 316057 CDS YP_570201.1 91977542 4023577 complement(3421760..3422155) 1 NC_007958.1 helix-turn-helix type 3 3422155 4023577 RPD_3074 Rhodopseudomonas palustris BisB5 helix-turn-helix type 3 YP_570201.1 3421760 R 316057 CDS YP_570202.1 91977543 4023578 complement(3422137..3423558) 1 NC_007958.1 magnesium transporter 3423558 4023578 RPD_3075 Rhodopseudomonas palustris BisB5 magnesium transporter YP_570202.1 3422137 R 316057 CDS YP_570203.1 91977544 4023579 3423721..3424518 1 NC_007958.1 polysaccharide deacetylase 3424518 4023579 RPD_3076 Rhodopseudomonas palustris BisB5 polysaccharide deacetylase YP_570203.1 3423721 D 316057 CDS YP_570204.1 91977545 4023580 3424636..3425958 1 NC_007958.1 polysaccharide deacetylase 3425958 4023580 RPD_3077 Rhodopseudomonas palustris BisB5 polysaccharide deacetylase YP_570204.1 3424636 D 316057 CDS YP_570205.1 91977546 4023581 3426110..3426352 1 NC_007958.1 prevent-host-death protein 3426352 4023581 RPD_3078 Rhodopseudomonas palustris BisB5 prevent-host-death protein YP_570205.1 3426110 D 316057 CDS YP_570206.1 91977547 4023582 3426357..3426797 1 NC_007958.1 PilT protein-like protein 3426797 4023582 RPD_3079 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_570206.1 3426357 D 316057 CDS YP_570207.1 91977548 4023583 3426884..3427300 1 NC_007958.1 hypothetical protein 3427300 4023583 RPD_3080 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570207.1 3426884 D 316057 CDS YP_570208.1 91977549 4023584 3427458..3427868 1 NC_007958.1 hypothetical protein 3427868 4023584 RPD_3081 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570208.1 3427458 D 316057 CDS YP_570209.1 91977550 4023586 complement(3428129..3428371) 1 NC_007958.1 hypothetical protein 3428371 4023586 RPD_3082 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570209.1 3428129 R 316057 CDS YP_570210.1 91977551 4023587 3428436..3429203 1 NC_007958.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 3429203 lipB 4023587 lipB Rhodopseudomonas palustris BisB5 lipoate-protein ligase B YP_570210.1 3428436 D 316057 CDS YP_570211.1 91977552 4023588 3429200..3429523 1 NC_007958.1 hypothetical protein 3429523 4023588 RPD_3084 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570211.1 3429200 D 316057 CDS YP_570212.1 91977553 4023589 3429775..3430446 1 NC_007958.1 regulatory protein TetR 3430446 4023589 RPD_3085 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_570212.1 3429775 D 316057 CDS YP_570213.1 91977554 4023590 3430443..3431369 1 NC_007958.1 cation diffusion facilitator family transporter 3431369 4023590 RPD_3086 Rhodopseudomonas palustris BisB5 cation diffusion facilitator family transporter YP_570213.1 3430443 D 316057 CDS YP_570214.1 91977555 4023591 complement(3431386..3433929) 1 NC_007958.1 ATPase-like ATP-binding protein 3433929 4023591 RPD_3087 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_570214.1 3431386 R 316057 CDS YP_570215.1 91977556 4023592 complement(3434257..3434799) 1 NC_007958.1 cytochrome B561 3434799 4023592 RPD_3088 Rhodopseudomonas palustris BisB5 cytochrome B561 YP_570215.1 3434257 R 316057 CDS YP_570216.1 91977557 4023593 complement(3434869..3435315) 1 NC_007958.1 hypothetical protein 3435315 4023593 RPD_3089 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570216.1 3434869 R 316057 CDS YP_570217.1 91977558 4023594 complement(3435312..3435854) 1 NC_007958.1 MarR family transcriptional regulator 3435854 4023594 RPD_3090 Rhodopseudomonas palustris BisB5 MarR family transcriptional regulator YP_570217.1 3435312 R 316057 CDS YP_570218.1 91977559 4023595 complement(3436090..3436389) 1 NC_007958.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 3436389 4023595 RPD_3091 Rhodopseudomonas palustris BisB5 acylphosphatase YP_570218.1 3436090 R 316057 CDS YP_570219.1 91977560 4023596 complement(3436386..3437255) 1 NC_007958.1 hypothetical protein 3437255 4023596 RPD_3092 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570219.1 3436386 R 316057 CDS YP_570220.1 91977561 4023597 complement(3437262..3439337) 1 NC_007958.1 carbamoyl-phosphate synthase L chain, ATP-binding 3439337 4023597 RPD_3093 Rhodopseudomonas palustris BisB5 carbamoyl-phosphate synthase L chain, ATP-binding YP_570220.1 3437262 R 316057 CDS YP_570221.1 91977562 4023598 3439526..3439705 1 NC_007958.1 hypothetical protein 3439705 4023598 RPD_3094 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570221.1 3439526 D 316057 CDS YP_570222.1 91977563 4023599 3439876..3440298 1 NC_007958.1 hypothetical protein 3440298 4023599 RPD_3095 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570222.1 3439876 D 316057 CDS YP_570223.1 91977564 4023600 complement(3440361..3440972) 1 NC_007958.1 hypothetical protein 3440972 4023600 RPD_3096 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570223.1 3440361 R 316057 CDS YP_570224.1 91977565 4023601 complement(3441283..3441681) 1 NC_007958.1 hypothetical protein 3441681 4023601 RPD_3097 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570224.1 3441283 R 316057 CDS YP_570225.1 91977566 4023602 3441798..3443261 1 NC_007958.1 deoxyribodipyrimidine photolyase 3443261 4023602 RPD_3098 Rhodopseudomonas palustris BisB5 deoxyribodipyrimidine photolyase YP_570225.1 3441798 D 316057 CDS YP_570226.1 91977567 4023603 3443353..3443751 1 NC_007958.1 hypothetical protein 3443751 4023603 RPD_3099 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570226.1 3443353 D 316057 CDS YP_570227.1 91977568 4023604 complement(3444830..3445705) 1 NC_007958.1 hypothetical protein 3445705 4023604 RPD_3100 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570227.1 3444830 R 316057 CDS YP_570228.1 91977569 4023605 complement(3445792..3446238) 1 NC_007958.1 hypothetical protein 3446238 4023605 RPD_3101 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570228.1 3445792 R 316057 CDS YP_570229.1 91977570 4023607 complement(3446710..3447702) 1 NC_007958.1 helix-turn-helix, AraC type 3447702 4023607 RPD_3102 Rhodopseudomonas palustris BisB5 helix-turn-helix, AraC type YP_570229.1 3446710 R 316057 CDS YP_570230.1 91977571 4023608 3447856..3449544 1 NC_007958.1 AMP-dependent synthetase and ligase 3449544 4023608 RPD_3103 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_570230.1 3447856 D 316057 CDS YP_570231.1 91977572 4023609 3449580..3450344 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 3450344 4023609 RPD_3104 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570231.1 3449580 D 316057 CDS YP_570232.1 91977573 4023610 3450390..3451577 1 NC_007958.1 acetyl-CoA C-acetyltransferase 3451577 4023610 RPD_3105 Rhodopseudomonas palustris BisB5 acetyl-CoA C-acetyltransferase YP_570232.1 3450390 D 316057 CDS YP_570233.1 91977574 4023611 3451593..3452720 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 3452720 4023611 RPD_3106 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570233.1 3451593 D 316057 CDS YP_570234.1 91977575 4023612 3453404..3455428 1 NC_007958.1 chemotaxis sensory transducer 3455428 4023612 RPD_3107 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_570234.1 3453404 D 316057 CDS YP_570235.1 91977576 4023613 3455611..3455961 1 NC_007958.1 hypothetical protein 3455961 4023613 RPD_3108 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570235.1 3455611 D 316057 CDS YP_570236.1 91977577 4023614 complement(3455982..3458687) 1 NC_007958.1 multi-sensor signal transduction histidine kinase 3458687 4023614 RPD_3109 Rhodopseudomonas palustris BisB5 multi-sensor signal transduction histidine kinase YP_570236.1 3455982 R 316057 CDS YP_570237.1 91977578 4023615 complement(3458902..3461082) 1 NC_007958.1 Pyrrolo-quinoline quinone 3461082 4023615 RPD_3110 Rhodopseudomonas palustris BisB5 Pyrrolo-quinoline quinone YP_570237.1 3458902 R 316057 CDS YP_570238.1 91977579 4023616 complement(3461238..3462032) 1 NC_007958.1 NUDIX hydrolase 3462032 4023616 RPD_3111 Rhodopseudomonas palustris BisB5 NUDIX hydrolase YP_570238.1 3461238 R 316057 CDS YP_570239.1 91977580 4023617 complement(3462037..3462990) 1 NC_007958.1 dihydrodipicolinate synthetase 3462990 4023617 RPD_3112 Rhodopseudomonas palustris BisB5 dihydrodipicolinate synthetase YP_570239.1 3462037 R 316057 CDS YP_570240.1 91977581 4023618 complement(3463159..3464019) 1 NC_007958.1 MaoC-like dehydratase 3464019 4023618 RPD_3113 Rhodopseudomonas palustris BisB5 MaoC-like dehydratase YP_570240.1 3463159 R 316057 CDS YP_570241.1 91977582 4023619 complement(3464204..3464596) 1 NC_007958.1 hypothetical protein 3464596 4023619 RPD_3114 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570241.1 3464204 R 316057 CDS YP_570242.1 91977583 4023620 complement(3464596..3465744) 1 NC_007958.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3465744 4023620 RPD_3115 Rhodopseudomonas palustris BisB5 acetyl-CoA acetyltransferase YP_570242.1 3464596 R 316057 CDS YP_570243.2 162138287 4023621 complement(3465948..3469433) 1 NC_007958.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3469433 4023621 RPD_3116 Rhodopseudomonas palustris BisB5 indolepyruvate ferredoxin oxidoreductase YP_570243.2 3465948 R 316057 CDS YP_570244.1 91977585 4023622 3469758..3470189 1 NC_007958.1 hypothetical protein 3470189 4023622 RPD_3117 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570244.1 3469758 D 316057 CDS YP_570245.1 91977586 4023623 3470425..3470703 1 NC_007958.1 hypothetical protein 3470703 4023623 RPD_3118 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570245.1 3470425 D 316057 CDS YP_570246.1 91977587 4023624 complement(3470791..3471600) 1 NC_007958.1 hypothetical protein 3471600 4023624 RPD_3119 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570246.1 3470791 R 316057 CDS YP_570247.1 91977588 4023625 complement(3471767..3472309) 1 NC_007958.1 hypothetical protein 3472309 4023625 RPD_3120 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570247.1 3471767 R 316057 CDS YP_570248.1 91977589 4023626 complement(3472459..3473514) 1 NC_007958.1 hypothetical protein 3473514 4023626 RPD_3121 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570248.1 3472459 R 316057 CDS YP_570249.1 91977590 4023627 complement(3473803..3475335) 1 NC_007958.1 carboxyl transferase 3475335 4023627 RPD_3122 Rhodopseudomonas palustris BisB5 carboxyl transferase YP_570249.1 3473803 R 316057 CDS YP_570250.1 91977591 4023628 3475580..3476056 1 NC_007958.1 hypothetical protein 3476056 4023628 RPD_3123 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570250.1 3475580 D 316057 CDS YP_570251.1 91977592 4023629 complement(3476063..3476878) 1 NC_007958.1 Beta-lactamase 3476878 4023629 RPD_3124 Rhodopseudomonas palustris BisB5 Beta-lactamase YP_570251.1 3476063 R 316057 CDS YP_570252.1 91977593 4023630 complement(3476945..3477211) 1 NC_007958.1 type III secretion proteins, related to flagellar biosynthesis protein FlhB 3477211 4023630 RPD_3125 Rhodopseudomonas palustris BisB5 type III secretion proteins, related to flagellar biosynthesis protein FlhB YP_570252.1 3476945 R 316057 CDS YP_570253.1 91977594 4023631 complement(3477208..3478989) 1 NC_007958.1 hypothetical protein 3478989 4023631 RPD_3126 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570253.1 3477208 R 316057 CDS YP_570254.1 91977595 4023632 complement(3479049..3479834) 1 NC_007958.1 ATP12 ATPase 3479834 4023632 RPD_3127 Rhodopseudomonas palustris BisB5 ATP12 ATPase YP_570254.1 3479049 R 316057 CDS YP_570255.1 91977596 4023633 complement(3479907..3480281) 1 NC_007958.1 hypothetical protein 3480281 4023633 RPD_3128 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570255.1 3479907 R 316057 CDS YP_570256.1 91977597 4023634 complement(3480278..3481612) 1 NC_007958.1 pseudouridine synthase RluD 3481612 4023634 RPD_3129 Rhodopseudomonas palustris BisB5 pseudouridine synthase RluD YP_570256.1 3480278 R 316057 CDS YP_570257.1 91977598 4023635 complement(3482974..3483510) 1 NC_007958.1 transposase and inactivated derivatives 3483510 4023635 RPD_3130 Rhodopseudomonas palustris BisB5 transposase and inactivated derivatives YP_570257.1 3482974 R 316057 CDS YP_570258.1 91977599 4023636 complement(3483691..3484443) 1 NC_007958.1 ABC transporter-like protein 3484443 4023636 RPD_3131 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570258.1 3483691 R 316057 CDS YP_570259.1 91977600 4023637 complement(3484440..3485210) 1 NC_007958.1 ABC transporter-like protein 3485210 4023637 RPD_3132 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570259.1 3484440 R 316057 CDS YP_570260.1 91977601 4023638 complement(3485207..3486442) 1 NC_007958.1 inner-membrane translocator 3486442 4023638 RPD_3133 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_570260.1 3485207 R 316057 CDS YP_570261.1 91977602 4023639 complement(3486447..3487454) 1 NC_007958.1 inner-membrane translocator 3487454 4023639 RPD_3134 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_570261.1 3486447 R 316057 CDS YP_570262.1 91977603 4023640 complement(3487683..3489035) 1 NC_007958.1 twin-arginine translocation pathway signal 3489035 4023640 RPD_3135 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_570262.1 3487683 R 316057 CDS YP_570263.1 91977604 4023641 complement(3489408..3489845) 1 NC_007958.1 histidine triad (HIT) protein 3489845 4023641 RPD_3136 Rhodopseudomonas palustris BisB5 histidine triad (HIT) protein YP_570263.1 3489408 R 316057 CDS YP_570264.1 91977605 4023642 3490783..3491037 1 NC_007958.1 plasmid stabilization protein 3491037 4023642 RPD_3137 Rhodopseudomonas palustris BisB5 plasmid stabilization protein YP_570264.1 3490783 D 316057 CDS YP_570265.1 91977606 4023643 3491051..3491473 1 NC_007958.1 PilT protein-like protein 3491473 4023643 RPD_3138 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_570265.1 3491051 D 316057 CDS YP_570266.1 91977607 4023644 complement(3491916..3494954) 1 NC_007958.1 acriflavin resistance protein 3494954 4023644 RPD_3139 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_570266.1 3491916 R 316057 CDS YP_570267.1 91977608 4023645 complement(3494954..3496036) 1 NC_007958.1 secretion protein HlyD 3496036 4023645 RPD_3140 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_570267.1 3494954 R 316057 CDS YP_570268.1 91977609 4023646 3496142..3496621 1 NC_007958.1 redox-sensitive transcriptional activator SoxR 3496621 4023646 RPD_3141 Rhodopseudomonas palustris BisB5 redox-sensitive transcriptional activator SoxR YP_570268.1 3496142 D 316057 CDS YP_570269.1 91977610 4023647 complement(3496702..3497049) 1 NC_007958.1 helix-turn-helix, HxlR type 3497049 4023647 RPD_3142 Rhodopseudomonas palustris BisB5 helix-turn-helix, HxlR type YP_570269.1 3496702 R 316057 CDS YP_570270.1 91977611 4023648 3497123..3497503 1 NC_007958.1 hypothetical protein 3497503 4023648 RPD_3143 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570270.1 3497123 D 316057 CDS YP_570271.1 91977612 4023649 complement(3497619..3498038) 1 NC_007958.1 hypothetical protein 3498038 4023649 RPD_3144 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570271.1 3497619 R 316057 CDS YP_570272.1 91977613 4023650 3498132..3498380 1 NC_007958.1 hypothetical protein 3498380 4023650 RPD_3145 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570272.1 3498132 D 316057 CDS YP_570273.1 91977614 4023651 3498606..3499169 1 NC_007958.1 cupin 2 barrel domain-containing protein 3499169 4023651 RPD_3146 Rhodopseudomonas palustris BisB5 cupin 2 barrel domain-containing protein YP_570273.1 3498606 D 316057 CDS YP_570274.1 91977615 4023652 complement(3499206..3500078) 1 NC_007958.1 LysR, substrate-binding 3500078 4023652 RPD_3147 Rhodopseudomonas palustris BisB5 LysR, substrate-binding YP_570274.1 3499206 R 316057 CDS YP_570275.1 91977616 4023653 3500237..3501391 1 NC_007958.1 ABC transporter-like protein 3501391 4023653 RPD_3148 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570275.1 3500237 D 316057 CDS YP_570276.1 91977617 4023654 3501384..3502331 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 3502331 4023654 RPD_3149 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_570276.1 3501384 D 316057 CDS YP_570277.1 91977618 4023655 3502328..3503164 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 3503164 4023655 RPD_3150 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_570277.1 3502328 D 316057 CDS YP_570278.1 91977619 4023656 3503196..3504476 1 NC_007958.1 extracellular solute-binding protein 3504476 4023656 RPD_3151 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_570278.1 3503196 D 316057 CDS YP_570279.1 91977620 4023657 3504630..3505454 1 NC_007958.1 metallophosphoesterase 3505454 4023657 RPD_3152 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_570279.1 3504630 D 316057 CDS YP_570280.1 91977621 4023658 complement(3505489..3506244) 1 NC_007958.1 hypothetical protein 3506244 4023658 RPD_3153 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570280.1 3505489 R 316057 CDS YP_570281.1 91977622 4023659 3506429..3507106 1 NC_007958.1 nitroreductase 3507106 4023659 RPD_3154 Rhodopseudomonas palustris BisB5 nitroreductase YP_570281.1 3506429 D 316057 CDS YP_570282.1 91977623 4023660 complement(3507320..3508651) 1 NC_007958.1 recombination factor protein RarA 3508651 4023660 RPD_3155 Rhodopseudomonas palustris BisB5 recombination factor protein RarA YP_570282.1 3507320 R 316057 CDS YP_570283.1 91977624 4023661 complement(3508837..3510231) 1 NC_007958.1 peptidase S1C, Do 3510231 4023661 RPD_3156 Rhodopseudomonas palustris BisB5 peptidase S1C, Do YP_570283.1 3508837 R 316057 CDS YP_570284.1 91977625 4023662 complement(3510336..3510728) 1 NC_007958.1 helix-turn-helix, HxlR type 3510728 4023662 RPD_3157 Rhodopseudomonas palustris BisB5 helix-turn-helix, HxlR type YP_570284.1 3510336 R 316057 CDS YP_570285.1 91977626 4023663 3510848..3511864 1 NC_007958.1 alcohol dehydrogenase GroES-like protein 3511864 4023663 RPD_3158 Rhodopseudomonas palustris BisB5 alcohol dehydrogenase GroES-like protein YP_570285.1 3510848 D 316057 CDS YP_570286.1 91977627 4023664 complement(3512148..3512558) 1 NC_007958.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 3512558 rplQ 4023664 rplQ Rhodopseudomonas palustris BisB5 50S ribosomal protein L17 YP_570286.1 3512148 R 316057 CDS YP_570287.1 91977628 4023665 complement(3512678..3513697) 1 NC_007958.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 3513697 4023665 RPD_3160 Rhodopseudomonas palustris BisB5 DNA-directed RNA polymerase subunit alpha YP_570287.1 3512678 R 316057 CDS YP_570288.1 91977629 4023666 complement(3513833..3514222) 1 NC_007958.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 3514222 4023666 RPD_3161 Rhodopseudomonas palustris BisB5 30S ribosomal protein S11 YP_570288.1 3513833 R 316057 CDS YP_570289.1 91977630 4023667 complement(3514345..3514713) 1 NC_007958.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 3514713 rpsM 4023667 rpsM Rhodopseudomonas palustris BisB5 30S ribosomal protein S13 YP_570289.1 3514345 R 316057 CDS YP_570290.1 91977631 4023668 complement(3514902..3515984) 1 NC_007958.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 3515984 adk 4023668 adk Rhodopseudomonas palustris BisB5 adenylate kinase YP_570290.1 3514902 R 316057 CDS YP_570291.1 91977632 4023669 complement(3515981..3517312) 1 NC_007958.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 3517312 secY 4023669 secY Rhodopseudomonas palustris BisB5 preprotein translocase subunit SecY YP_570291.1 3515981 R 316057 CDS YP_570292.1 91977633 4023670 complement(3517462..3517947) 1 NC_007958.1 late assembly protein; 50S ribosomal protein L15 3517947 rplO 4023670 rplO Rhodopseudomonas palustris BisB5 50S ribosomal protein L15 YP_570292.1 3517462 R 316057 CDS YP_570293.1 91977634 4023671 complement(3517960..3518154) 1 NC_007958.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 3518154 rpmD 4023671 rpmD Rhodopseudomonas palustris BisB5 50S ribosomal protein L30 YP_570293.1 3517960 R 316057 CDS YP_570294.1 91977635 4023672 complement(3518211..3518786) 1 NC_007958.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 3518786 rpsE 4023672 rpsE Rhodopseudomonas palustris BisB5 30S ribosomal protein S5 YP_570294.1 3518211 R 316057 CDS YP_570295.1 91977636 4023673 complement(3518849..3519211) 1 NC_007958.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 3519211 rplR 4023673 rplR Rhodopseudomonas palustris BisB5 50S ribosomal protein L18 YP_570295.1 3518849 R 316057 CDS YP_570296.1 91977637 4023674 complement(3519223..3519756) 1 NC_007958.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 3519756 rplF 4023674 rplF Rhodopseudomonas palustris BisB5 50S ribosomal protein L6 YP_570296.1 3519223 R 316057 CDS YP_570297.1 91977638 4023675 complement(3519870..3520268) 1 NC_007958.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 3520268 rpsH 4023675 rpsH Rhodopseudomonas palustris BisB5 30S ribosomal protein S8 YP_570297.1 3519870 R 316057 CDS YP_570298.1 91977639 4023676 complement(3520281..3520586) 1 NC_007958.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 3520586 rpsN 4023676 rpsN Rhodopseudomonas palustris BisB5 30S ribosomal protein S14 YP_570298.1 3520281 R 316057 CDS YP_570299.1 91977640 4023677 complement(3520630..3521187) 1 NC_007958.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 3521187 rplE 4023677 rplE Rhodopseudomonas palustris BisB5 50S ribosomal protein L5 YP_570299.1 3520630 R 316057 CDS YP_570300.1 91977641 4023678 complement(3521180..3521494) 1 NC_007958.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 3521494 rplX 4023678 rplX Rhodopseudomonas palustris BisB5 50S ribosomal protein L24 YP_570300.1 3521180 R 316057 CDS YP_570301.1 91977642 4023679 complement(3521494..3521862) 1 NC_007958.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 3521862 rplN 4023679 rplN Rhodopseudomonas palustris BisB5 50S ribosomal protein L14 YP_570301.1 3521494 R 316057 CDS YP_570302.1 91977643 4023680 complement(3521923..3522171) 1 NC_007958.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 3522171 rpsQ 4023680 rpsQ Rhodopseudomonas palustris BisB5 30S ribosomal protein S17 YP_570302.1 3521923 R 316057 CDS YP_570303.1 91977644 4023681 complement(3522183..3522392) 1 NC_007958.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 3522392 4023681 RPD_3176 Rhodopseudomonas palustris BisB5 50S ribosomal protein L29 YP_570303.1 3522183 R 316057 CDS YP_570304.1 91977645 4023682 complement(3522403..3522816) 1 NC_007958.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 3522816 rplP 4023682 rplP Rhodopseudomonas palustris BisB5 50S ribosomal protein L16 YP_570304.1 3522403 R 316057 CDS YP_570305.1 91977646 4023683 complement(3522850..3523548) 1 NC_007958.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 3523548 rpsC 4023683 rpsC Rhodopseudomonas palustris BisB5 30S ribosomal protein S3 YP_570305.1 3522850 R 316057 CDS YP_570306.1 91977647 4023684 complement(3523572..3523958) 1 NC_007958.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 3523958 rplV 4023684 rplV Rhodopseudomonas palustris BisB5 50S ribosomal protein L22 YP_570306.1 3523572 R 316057 CDS YP_570307.1 91977648 4023685 complement(3523969..3524247) 1 NC_007958.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 3524247 rpsS 4023685 rpsS Rhodopseudomonas palustris BisB5 30S ribosomal protein S19 YP_570307.1 3523969 R 316057 CDS YP_570308.1 91977649 4023686 complement(3524259..3525095) 1 NC_007958.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 3525095 rplB 4023686 rplB Rhodopseudomonas palustris BisB5 50S ribosomal protein L2 YP_570308.1 3524259 R 316057 CDS YP_570309.1 91977650 4023687 complement(3525109..3525408) 1 NC_007958.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 3525408 rplW 4023687 rplW Rhodopseudomonas palustris BisB5 50S ribosomal protein L23 YP_570309.1 3525109 R 316057 CDS YP_570310.1 91977651 4023688 complement(3525405..3526025) 1 NC_007958.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 3526025 rplD 4023688 rplD Rhodopseudomonas palustris BisB5 50S ribosomal protein L4 YP_570310.1 3525405 R 316057 CDS YP_570311.1 91977652 4023689 complement(3526027..3526752) 1 NC_007958.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 3526752 rplC 4023689 rplC Rhodopseudomonas palustris BisB5 50S ribosomal protein L3 YP_570311.1 3526027 R 316057 CDS YP_570312.1 91977653 4023690 complement(3526802..3527110) 1 NC_007958.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 3527110 rpsJ 4023690 rpsJ Rhodopseudomonas palustris BisB5 30S ribosomal protein S10 YP_570312.1 3526802 R 316057 CDS YP_570313.1 91977654 4023691 complement(3527195..3528385) 1 NC_007958.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 3528385 4023691 RPD_3186 Rhodopseudomonas palustris BisB5 elongation factor Tu YP_570313.1 3527195 R 316057 CDS YP_570314.1 91977655 4023692 complement(3528425..3530497) 1 NC_007958.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3530497 4023692 RPD_3187 Rhodopseudomonas palustris BisB5 elongation factor G YP_570314.1 3528425 R 316057 CDS YP_570315.1 91977656 4023693 complement(3530528..3530998) 1 NC_007958.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 3530998 4023693 RPD_3188 Rhodopseudomonas palustris BisB5 30S ribosomal protein S7 YP_570315.1 3530528 R 316057 CDS YP_570316.1 91977657 4023694 complement(3531014..3531385) 1 NC_007958.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 3531385 rpsL 4023694 rpsL Rhodopseudomonas palustris BisB5 30S ribosomal protein S12 YP_570316.1 3531014 R 316057 CDS YP_570317.1 91977658 4023695 3532458..3533399 1 NC_007958.1 hypothetical protein 3533399 4023695 RPD_3190 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570317.1 3532458 D 316057 CDS YP_570318.1 91977659 4023696 complement(3533535..3534749) 1 NC_007958.1 hypothetical protein 3534749 4023696 RPD_3191 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570318.1 3533535 R 316057 CDS YP_570319.1 91977660 4023697 complement(3534911..3537016) 1 NC_007958.1 ABC transporter-like protein 3537016 4023697 RPD_3192 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570319.1 3534911 R 316057 CDS YP_570320.1 91977661 4023698 complement(3537228..3539297) 1 NC_007958.1 type 11 methyltransferase 3539297 4023698 RPD_3193 Rhodopseudomonas palustris BisB5 type 11 methyltransferase YP_570320.1 3537228 R 316057 CDS YP_570321.1 91977662 4023699 complement(3539592..3543794) 1 NC_007958.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 3543794 4023699 RPD_3194 Rhodopseudomonas palustris BisB5 DNA-directed RNA polymerase subunit beta' YP_570321.1 3539592 R 316057 CDS YP_570322.1 91977663 4023700 complement(3543944..3548068) 1 NC_007958.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 3548068 rpoB 4023700 rpoB Rhodopseudomonas palustris BisB5 DNA-directed RNA polymerase subunit beta YP_570322.1 3543944 R 316057 CDS YP_570323.1 91977664 4023701 complement(3548543..3548914) 1 NC_007958.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 3548914 rplL 4023701 rplL Rhodopseudomonas palustris BisB5 50S ribosomal protein L7/L12 YP_570323.1 3548543 R 316057 CDS YP_570324.1 91977665 4023702 complement(3548970..3549488) 1 NC_007958.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 3549488 rplJ 4023702 rplJ Rhodopseudomonas palustris BisB5 50S ribosomal protein L10 YP_570324.1 3548970 R 316057 CDS YP_570325.1 91977666 4023704 complement(3550208..3551158) 1 NC_007958.1 D-isomer specific 2-hydroxyacid dehydrogenase 3551158 4023704 RPD_3199 Rhodopseudomonas palustris BisB5 D-isomer specific 2-hydroxyacid dehydrogenase YP_570325.1 3550208 R 316057 CDS YP_570326.1 91977667 4023705 complement(3551271..3551960) 1 NC_007958.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 3551960 rplA 4023705 rplA Rhodopseudomonas palustris BisB5 50S ribosomal protein L1 YP_570326.1 3551271 R 316057 CDS YP_570327.1 91977668 4023706 complement(3551966..3552394) 1 NC_007958.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 3552394 rplK 4023706 rplK Rhodopseudomonas palustris BisB5 50S ribosomal protein L11 YP_570327.1 3551966 R 316057 CDS YP_570328.1 91977669 4023707 complement(3552687..3553217) 1 NC_007958.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 3553217 nusG 4023707 nusG Rhodopseudomonas palustris BisB5 transcription antitermination protein NusG YP_570328.1 3552687 R 316057 CDS YP_570329.1 91977670 4023708 complement(3553234..3553422) 1 NC_007958.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 3553422 secE 4023708 secE Rhodopseudomonas palustris BisB5 preprotein translocase subunit SecE YP_570329.1 3553234 R 316057 CDS YP_570330.1 91977671 4023710 complement(3554206..3555396) 1 NC_007958.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 3555396 4023710 RPD_3204 Rhodopseudomonas palustris BisB5 elongation factor Tu YP_570330.1 3554206 R 316057 CDS YP_570331.1 91977672 4023711 3555571..3556794 1 NC_007958.1 beta-lactamase 3556794 4023711 RPD_3205 Rhodopseudomonas palustris BisB5 beta-lactamase YP_570331.1 3555571 D 316057 CDS YP_570332.1 91977673 4023712 complement(3556950..3557717) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 3557717 4023712 RPD_3206 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570332.1 3556950 R 316057 CDS YP_570333.1 91977674 4023713 complement(3557839..3558594) 1 NC_007958.1 phosphoglycerate mutase 3558594 4023713 RPD_3207 Rhodopseudomonas palustris BisB5 phosphoglycerate mutase YP_570333.1 3557839 R 316057 CDS YP_570334.1 91977675 4023714 3558748..3559533 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 3559533 4023714 RPD_3208 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570334.1 3558748 D 316057 CDS YP_570335.1 91977676 4023715 complement(3560227..3561402) 1 NC_007958.1 aminoglycoside phosphotransferase 3561402 4023715 RPD_3209 Rhodopseudomonas palustris BisB5 aminoglycoside phosphotransferase YP_570335.1 3560227 R 316057 CDS YP_570336.1 91977677 4023716 complement(3561472..3562710) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 3562710 4023716 RPD_3210 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570336.1 3561472 R 316057 CDS YP_570337.1 91977678 4023717 3562954..3563619 1 NC_007958.1 regulatory protein TetR 3563619 4023717 RPD_3211 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_570337.1 3562954 D 316057 CDS YP_570338.1 91977679 4023719 3564061..3564621 1 NC_007958.1 hypothetical protein 3564621 4023719 RPD_3212 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570338.1 3564061 D 316057 CDS YP_570339.1 91977680 4023720 3564858..3567044 1 NC_007958.1 glycogen debranching protein GlgX 3567044 4023720 RPD_3213 Rhodopseudomonas palustris BisB5 glycogen debranching protein GlgX YP_570339.1 3564858 D 316057 CDS YP_570340.1 91977681 4023721 3567168..3568019 1 NC_007958.1 transglutaminase-like protein 3568019 4023721 RPD_3214 Rhodopseudomonas palustris BisB5 transglutaminase-like protein YP_570340.1 3567168 D 316057 CDS YP_570341.1 91977682 4023722 complement(3568155..3568367) 1 NC_007958.1 hypothetical protein 3568367 4023722 RPD_3215 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570341.1 3568155 R 316057 CDS YP_570342.1 91977683 4023723 3568519..3568926 1 NC_007958.1 hypothetical protein 3568926 4023723 RPD_3216 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570342.1 3568519 D 316057 CDS YP_570343.1 91977684 4023724 complement(3569305..3570468) 1 NC_007958.1 peptidase S1 and S6, chymotrypsin/Hap 3570468 4023724 RPD_3217 Rhodopseudomonas palustris BisB5 peptidase S1 and S6, chymotrypsin/Hap YP_570343.1 3569305 R 316057 CDS YP_570344.1 91977685 4023725 complement(3570643..3572718) 1 NC_007958.1 DEAD/DEAH box helicase-like protein 3572718 4023725 RPD_3218 Rhodopseudomonas palustris BisB5 DEAD/DEAH box helicase-like protein YP_570344.1 3570643 R 316057 CDS YP_570345.1 91977686 4023726 3573047..3573718 1 NC_007958.1 peptidase M50 3573718 4023726 RPD_3219 Rhodopseudomonas palustris BisB5 peptidase M50 YP_570345.1 3573047 D 316057 CDS YP_570346.1 91977687 4023727 3574794..3574985 1 NC_007958.1 hypothetical protein 3574985 4023727 RPD_3220 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570346.1 3574794 D 316057 CDS YP_570347.1 91977688 4023728 3575248..3576030 1 NC_007958.1 NLPA lipoprotein 3576030 4023728 RPD_3221 Rhodopseudomonas palustris BisB5 NLPA lipoprotein YP_570347.1 3575248 D 316057 CDS YP_570348.1 91977689 4023729 3576118..3577455 1 NC_007958.1 phenylacetate--CoA ligase 3577455 4023729 RPD_3222 Rhodopseudomonas palustris BisB5 phenylacetate--CoA ligase YP_570348.1 3576118 D 316057 CDS YP_570349.1 91977690 4023730 complement(3577735..3578508) 1 NC_007958.1 lipoprotein YaeC 3578508 4023730 RPD_3223 Rhodopseudomonas palustris BisB5 lipoprotein YaeC YP_570349.1 3577735 R 316057 CDS YP_570350.1 91977691 4023731 complement(3578541..3579206) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 3579206 4023731 RPD_3224 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_570350.1 3578541 R 316057 CDS YP_570351.1 91977692 4023732 complement(3579196..3580344) 1 NC_007958.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 3580344 metN 4023732 metN Rhodopseudomonas palustris BisB5 DL-methionine transporter ATP-binding subunit YP_570351.1 3579196 R 316057 CDS YP_570352.1 91977693 4023733 complement(3580493..3581443) 1 NC_007958.1 Serine O-acetyltransferase 3581443 4023733 RPD_3226 Rhodopseudomonas palustris BisB5 Serine O-acetyltransferase YP_570352.1 3580493 R 316057 CDS YP_570353.1 91977694 4023734 complement(3581450..3583438) 1 NC_007958.1 SufS subfamily cysteine desulfurase 3583438 4023734 RPD_3227 Rhodopseudomonas palustris BisB5 SufS subfamily cysteine desulfurase YP_570353.1 3581450 R 316057 CDS YP_570354.1 91977695 4023735 complement(3583425..3584369) 1 NC_007958.1 hypothetical protein 3584369 4023735 RPD_3228 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570354.1 3583425 R 316057 CDS YP_570355.1 91977696 4023736 3585090..3585683 1 NC_007958.1 hypothetical protein 3585683 4023736 RPD_3229 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570355.1 3585090 D 316057 CDS YP_570356.1 91977697 4023738 3586165..3586986 1 NC_007958.1 RNA methyltransferase TrmH, group 3 3586986 4023738 RPD_3230 Rhodopseudomonas palustris BisB5 RNA methyltransferase TrmH, group 3 YP_570356.1 3586165 D 316057 CDS YP_570357.1 91977698 4023739 complement(3587182..3587724) 1 NC_007958.1 hypothetical protein 3587724 4023739 RPD_3231 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570357.1 3587182 R 316057 CDS YP_570358.1 91977699 4023740 complement(3587796..3588275) 1 NC_007958.1 hypothetical protein 3588275 4023740 RPD_3232 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570358.1 3587796 R 316057 CDS YP_570359.1 91977700 4023742 complement(3589204..3589311) 1 NC_007958.1 hypothetical protein 3589311 4023742 RPD_3233 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570359.1 3589204 R 316057 CDS YP_570360.1 91977701 4023743 complement(3589470..3590183) 1 NC_007958.1 putative outer membrane protein 3590183 4023743 RPD_3234 Rhodopseudomonas palustris BisB5 putative outer membrane protein YP_570360.1 3589470 R 316057 CDS YP_570361.1 91977702 4023744 complement(3590358..3590795) 1 NC_007958.1 hypothetical protein 3590795 4023744 RPD_3235 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570361.1 3590358 R 316057 CDS YP_570362.1 91977703 4023745 3591103..3591639 1 NC_007958.1 TPR repeat-containing protein 3591639 4023745 RPD_3236 Rhodopseudomonas palustris BisB5 TPR repeat-containing protein YP_570362.1 3591103 D 316057 CDS YP_570363.1 91977704 4023746 3591765..3592544 1 NC_007958.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 3592544 ppnK 4023746 ppnK Rhodopseudomonas palustris BisB5 inorganic polyphosphate/ATP-NAD kinase YP_570363.1 3591765 D 316057 CDS YP_570364.1 91977705 4023747 3592974..3596528 1 NC_007958.1 hypothetical protein 3596528 4023747 RPD_3238 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570364.1 3592974 D 316057 CDS YP_570365.1 91977706 4023748 complement(3596748..3597020) 1 NC_007958.1 hypothetical protein 3597020 4023748 RPD_3239 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570365.1 3596748 R 316057 CDS YP_570366.1 91977707 4023749 complement(3597131..3597313) 1 NC_007958.1 hypothetical protein 3597313 4023749 RPD_3240 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570366.1 3597131 R 316057 CDS YP_570367.1 91977708 4023750 3597644..3598189 1 NC_007958.1 response regulator receiver 3598189 4023750 RPD_3241 Rhodopseudomonas palustris BisB5 response regulator receiver YP_570367.1 3597644 D 316057 CDS YP_570368.1 91977709 4023751 3598194..3598772 1 NC_007958.1 hypothetical protein 3598772 4023751 RPD_3242 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570368.1 3598194 D 316057 CDS YP_570369.1 91977710 4023752 complement(3598860..3600041) 1 NC_007958.1 hypothetical protein 3600041 4023752 RPD_3243 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570369.1 3598860 R 316057 CDS YP_570370.1 91977711 4023753 complement(3600400..3601494) 1 NC_007958.1 hypothetical protein 3601494 4023753 RPD_3244 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570370.1 3600400 R 316057 CDS YP_570371.1 91977712 4023754 3601783..3602331 1 NC_007958.1 hypothetical protein 3602331 4023754 RPD_3245 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570371.1 3601783 D 316057 CDS YP_570372.1 91977713 4023756 complement(3602497..3602940) 1 NC_007958.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 3602940 hisI 4023756 hisI Rhodopseudomonas palustris BisB5 phosphoribosyl-AMP cyclohydrolase YP_570372.1 3602497 R 316057 CDS YP_570373.1 91977714 4023757 complement(3603066..3603755) 1 NC_007958.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 3603755 folE 4023757 folE Rhodopseudomonas palustris BisB5 GTP cyclohydrolase I YP_570373.1 3603066 R 316057 CDS YP_570374.1 91977715 4023758 3603946..3604467 1 NC_007958.1 NifU-like protein 3604467 4023758 RPD_3249 Rhodopseudomonas palustris BisB5 NifU-like protein YP_570374.1 3603946 D 316057 CDS YP_570375.1 91977716 4023759 complement(3604499..3605398) 1 NC_007958.1 hypothetical protein 3605398 4023759 RPD_3250 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570375.1 3604499 R 316057 CDS YP_570376.1 91977717 4023760 3605698..3606108 1 NC_007958.1 hypothetical protein 3606108 4023760 RPD_3251 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570376.1 3605698 D 316057 CDS YP_570377.1 91977718 4023761 3606237..3607583 1 NC_007958.1 hypothetical protein 3607583 4023761 RPD_3252 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570377.1 3606237 D 316057 CDS YP_570378.1 91977719 4023762 complement(3607684..3608535) 1 NC_007958.1 hypothetical protein 3608535 4023762 RPD_3253 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570378.1 3607684 R 316057 CDS YP_570379.1 91977720 4023763 complement(3608614..3610077) 1 NC_007958.1 sulfatase 3610077 4023763 RPD_3254 Rhodopseudomonas palustris BisB5 sulfatase YP_570379.1 3608614 R 316057 CDS YP_570380.1 91977721 4023764 complement(3610283..3611497) 1 NC_007958.1 hypothetical protein 3611497 4023764 RPD_3255 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570380.1 3610283 R 316057 CDS YP_570381.1 91977722 4023765 complement(3611625..3612695) 1 NC_007958.1 catalase 3612695 4023765 RPD_3256 Rhodopseudomonas palustris BisB5 catalase YP_570381.1 3611625 R 316057 CDS YP_570382.1 91977723 4023766 3613275..3613484 1 NC_007958.1 cold-shock protein, DNA-binding 3613484 4023766 RPD_3257 Rhodopseudomonas palustris BisB5 cold-shock protein, DNA-binding YP_570382.1 3613275 D 316057 CDS YP_570383.1 91977724 4023767 3613587..3613832 1 NC_007958.1 hypothetical protein 3613832 4023767 RPD_3258 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570383.1 3613587 D 316057 CDS YP_570384.1 91977725 4023768 3613997..3614197 1 NC_007958.1 hypothetical protein 3614197 4023768 RPD_3259 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570384.1 3613997 D 316057 CDS YP_570385.1 91977726 4023769 complement(3614244..3615362) 1 NC_007958.1 major facilitator transporter 3615362 4023769 RPD_3260 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_570385.1 3614244 R 316057 CDS YP_570386.1 91977727 4023770 3615577..3617640 1 NC_007958.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 3617640 thrS 4023770 thrS Rhodopseudomonas palustris BisB5 threonyl-tRNA synthetase YP_570386.1 3615577 D 316057 CDS YP_570387.1 91977728 4023771 3617651..3618226 1 NC_007958.1 nitroreductase 3618226 4023771 RPD_3262 Rhodopseudomonas palustris BisB5 nitroreductase YP_570387.1 3617651 D 316057 CDS YP_570388.1 91977729 4023772 complement(3618230..3620701) 1 NC_007958.1 GGDEF domain-containing protein 3620701 4023772 RPD_3263 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_570388.1 3618230 R 316057 CDS YP_570389.1 91977730 4023773 3620963..3621748 1 NC_007958.1 HWE histidine kinase 3621748 4023773 RPD_3264 Rhodopseudomonas palustris BisB5 HWE histidine kinase YP_570389.1 3620963 D 316057 CDS YP_570390.1 91977731 4023774 complement(3621898..3622083) 1 NC_007958.1 hypothetical protein 3622083 4023774 RPD_3265 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570390.1 3621898 R 316057 CDS YP_570391.1 91977732 4023775 complement(3622301..3622963) 1 NC_007958.1 cyclic nucleotide-binding protein 3622963 4023775 RPD_3266 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_570391.1 3622301 R 316057 CDS YP_570392.1 91977733 4023776 complement(3622947..3623273) 1 NC_007958.1 hypothetical protein 3623273 4023776 RPD_3267 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570392.1 3622947 R 316057 CDS YP_570393.1 91977734 4023777 complement(3623555..3623812) 1 NC_007958.1 hypothetical protein 3623812 4023777 RPD_3268 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570393.1 3623555 R 316057 CDS YP_570394.1 91977735 4023778 complement(3623882..3624937) 1 NC_007958.1 hypothetical protein 3624937 4023778 RPD_3269 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570394.1 3623882 R 316057 CDS YP_570395.1 91977736 4023779 3625039..3626211 1 NC_007958.1 patatin 3626211 4023779 RPD_3270 Rhodopseudomonas palustris BisB5 patatin YP_570395.1 3625039 D 316057 CDS YP_570396.1 91977737 4023780 complement(3626386..3626817) 1 NC_007958.1 putative signal-transduction protein with CBS domains 3626817 4023780 RPD_3271 Rhodopseudomonas palustris BisB5 putative signal-transduction protein with CBS domains YP_570396.1 3626386 R 316057 CDS YP_570397.1 91977738 4023781 complement(3627009..3628136) 1 NC_007958.1 rhomboid-like protein 3628136 4023781 RPD_3272 Rhodopseudomonas palustris BisB5 rhomboid-like protein YP_570397.1 3627009 R 316057 CDS YP_570398.1 91977739 4023782 3628301..3628861 1 NC_007958.1 hypothetical protein 3628861 4023782 RPD_3273 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570398.1 3628301 D 316057 CDS YP_570399.1 91977740 4023783 complement(3628843..3629613) 1 NC_007958.1 cyclic nucleotide-binding protein 3629613 4023783 RPD_3274 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_570399.1 3628843 R 316057 CDS YP_570400.1 91977741 4023784 complement(3629771..3630010) 1 NC_007958.1 hypothetical protein 3630010 4023784 RPD_3275 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570400.1 3629771 R 316057 CDS YP_570401.1 91977742 4023785 3630017..3630493 1 NC_007958.1 hypothetical protein 3630493 4023785 RPD_3276 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570401.1 3630017 D 316057 CDS YP_570402.1 91977743 4023786 3630616..3633054 1 NC_007958.1 ATPase-like ATP-binding protein 3633054 4023786 RPD_3277 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_570402.1 3630616 D 316057 CDS YP_570403.1 91977744 4023787 3633134..3633745 1 NC_007958.1 type IV pilus assembly PilZ 3633745 4023787 RPD_3278 Rhodopseudomonas palustris BisB5 type IV pilus assembly PilZ YP_570403.1 3633134 D 316057 CDS YP_570404.1 91977745 4023788 3634077..3634700 1 NC_007958.1 transglutaminase-like cysteine peptidase, BTLCP 3634700 4023788 RPD_3279 Rhodopseudomonas palustris BisB5 transglutaminase-like cysteine peptidase, BTLCP YP_570404.1 3634077 D 316057 CDS YP_570405.1 91977746 4023789 complement(3634894..3635427) 1 NC_007958.1 MarR family transcriptional regulator 3635427 4023789 RPD_3280 Rhodopseudomonas palustris BisB5 MarR family transcriptional regulator YP_570405.1 3634894 R 316057 CDS YP_570406.1 91977747 4023790 3635962..3637458 1 NC_007958.1 hypothetical protein 3637458 4023790 RPD_3281 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570406.1 3635962 D 316057 CDS YP_570407.1 91977748 4023791 3637875..3638072 1 NC_007958.1 hypothetical protein 3638072 4023791 RPD_3282 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570407.1 3637875 D 316057 CDS YP_570408.1 91977749 4023792 3638085..3638246 1 NC_007958.1 hypothetical protein 3638246 4023792 RPD_3283 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570408.1 3638085 D 316057 CDS YP_570409.1 91977750 4023793 complement(3638269..3638799) 1 NC_007958.1 hexapaptide repeat-containing transferase 3638799 4023793 RPD_3284 Rhodopseudomonas palustris BisB5 hexapaptide repeat-containing transferase YP_570409.1 3638269 R 316057 CDS YP_570410.1 91977751 4023794 complement(3638858..3639187) 1 NC_007958.1 hypothetical protein 3639187 4023794 RPD_3285 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570410.1 3638858 R 316057 CDS YP_570411.1 91977752 4023795 3639374..3640084 1 NC_007958.1 hypothetical protein 3640084 4023795 RPD_3286 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570411.1 3639374 D 316057 CDS YP_570412.1 91977753 4023796 complement(3640180..3640398) 1 NC_007958.1 hypothetical protein 3640398 4023796 RPD_3287 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570412.1 3640180 R 316057 CDS YP_570413.1 91977754 4023797 complement(3640585..3641445) 1 NC_007958.1 serine O-acetyltransferase 3641445 4023797 RPD_3288 Rhodopseudomonas palustris BisB5 serine O-acetyltransferase YP_570413.1 3640585 R 316057 CDS YP_570414.1 91977755 4023798 complement(3641643..3642395) 1 NC_007958.1 alpha/beta hydrolase fold protein 3642395 4023798 RPD_3289 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_570414.1 3641643 R 316057 CDS YP_570415.1 91977756 4023799 complement(3642490..3643650) 1 NC_007958.1 hypothetical protein 3643650 4023799 RPD_3290 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570415.1 3642490 R 316057 CDS YP_570416.1 91977757 4023800 3643858..3644103 1 NC_007958.1 hypothetical protein 3644103 4023800 RPD_3291 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570416.1 3643858 D 316057 CDS YP_570417.1 91977758 4023801 3644111..3645325 1 NC_007958.1 salicylate 1-monooxygenase 3645325 4023801 RPD_3292 Rhodopseudomonas palustris BisB5 salicylate 1-monooxygenase YP_570417.1 3644111 D 316057 CDS YP_570418.1 91977759 4023802 complement(3645370..3645816) 1 NC_007958.1 hypothetical protein 3645816 4023802 RPD_3293 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570418.1 3645370 R 316057 CDS YP_570419.1 91977760 4023803 3646023..3647297 1 NC_007958.1 cellulose biosynthesis protein CelD 3647297 4023803 RPD_3294 Rhodopseudomonas palustris BisB5 cellulose biosynthesis protein CelD YP_570419.1 3646023 D 316057 CDS YP_570420.1 91977761 4023805 3647834..3649009 1 NC_007958.1 peptidase M20D, amidohydrolase 3649009 4023805 RPD_3295 Rhodopseudomonas palustris BisB5 peptidase M20D, amidohydrolase YP_570420.1 3647834 D 316057 CDS YP_570421.1 91977762 4023806 3649002..3650417 1 NC_007958.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3650417 4023806 RPD_3296 Rhodopseudomonas palustris BisB5 amidase YP_570421.1 3649002 D 316057 CDS YP_570422.1 91977763 4023807 3650608..3651498 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3651498 4023807 RPD_3297 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_570422.1 3650608 D 316057 CDS YP_570423.1 91977764 4023808 complement(3651673..3653394) 1 NC_007958.1 AMP-dependent synthetase and ligase 3653394 4023808 RPD_3298 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_570423.1 3651673 R 316057 CDS YP_570424.1 91977765 4023809 complement(3653594..3654481) 1 NC_007958.1 3-hydroxyisobutyrate dehydrogenase 3654481 4023809 RPD_3299 Rhodopseudomonas palustris BisB5 3-hydroxyisobutyrate dehydrogenase YP_570424.1 3653594 R 316057 CDS YP_570425.1 91977766 4023810 complement(3654519..3655592) 1 NC_007958.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 3655592 4023810 RPD_3300 Rhodopseudomonas palustris BisB5 3-hydroxyisobutyryl-CoA hydrolase YP_570425.1 3654519 R 316057 CDS YP_570426.1 91977767 4023811 complement(3655589..3656734) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 3656734 4023811 RPD_3301 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570426.1 3655589 R 316057 CDS YP_570427.1 91977768 4023812 complement(3656747..3658360) 1 NC_007958.1 methylmalonate-semialdehyde dehydrogenase 3658360 4023812 RPD_3302 Rhodopseudomonas palustris BisB5 methylmalonate-semialdehyde dehydrogenase YP_570427.1 3656747 R 316057 CDS YP_570428.1 91977769 4023813 complement(3658415..3659080) 1 NC_007958.1 TetR family transcriptional regulator 3659080 4023813 RPD_3303 Rhodopseudomonas palustris BisB5 TetR family transcriptional regulator YP_570428.1 3658415 R 316057 CDS YP_570429.1 91977770 4023814 3659229..3659999 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3659999 4023814 RPD_3304 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_570429.1 3659229 D 316057 CDS YP_570430.1 91977771 4023815 complement(3660027..3660656) 1 NC_007958.1 phenylacetic acid degradation-like protein 3660656 4023815 RPD_3305 Rhodopseudomonas palustris BisB5 phenylacetic acid degradation-like protein YP_570430.1 3660027 R 316057 CDS YP_570431.1 91977772 4023816 3660855..3662042 1 NC_007958.1 acetyl-CoA C-acetyltransferase 3662042 4023816 RPD_3306 Rhodopseudomonas palustris BisB5 acetyl-CoA C-acetyltransferase YP_570431.1 3660855 D 316057 CDS YP_570432.1 91977773 4023817 3662103..3663386 1 NC_007958.1 major facilitator transporter 3663386 4023817 RPD_3307 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_570432.1 3662103 D 316057 CDS YP_570433.1 91977774 4023818 complement(3663544..3664491) 1 NC_007958.1 regulatory protein IclR 3664491 4023818 RPD_3308 Rhodopseudomonas palustris BisB5 regulatory protein IclR YP_570433.1 3663544 R 316057 CDS YP_570434.1 91977775 4023819 3664628..3664891 1 NC_007958.1 hypothetical protein 3664891 4023819 RPD_3309 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570434.1 3664628 D 316057 CDS YP_570435.1 91977776 4023820 3665141..3666301 1 NC_007958.1 TRAP transporter solute receptor TAXI family protein 3666301 4023820 RPD_3310 Rhodopseudomonas palustris BisB5 TRAP transporter solute receptor TAXI family protein YP_570435.1 3665141 D 316057 CDS YP_570436.1 91977777 4023821 3666332..3668410 1 NC_007958.1 TRAP transporter, 4TM/12TM fusion protein 3668410 4023821 RPD_3311 Rhodopseudomonas palustris BisB5 TRAP transporter, 4TM/12TM fusion protein YP_570436.1 3666332 D 316057 CDS YP_570437.1 91977778 4023822 complement(3668432..3670525) 1 NC_007958.1 CoA-binding protein 3670525 4023822 RPD_3312 Rhodopseudomonas palustris BisB5 CoA-binding protein YP_570437.1 3668432 R 316057 CDS YP_570438.1 91977779 4023823 complement(3670522..3670887) 1 NC_007958.1 hypothetical protein 3670887 4023823 RPD_3313 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570438.1 3670522 R 316057 CDS YP_570439.1 91977780 4023824 complement(3670884..3672098) 1 NC_007958.1 thiolase 3672098 4023824 RPD_3314 Rhodopseudomonas palustris BisB5 thiolase YP_570439.1 3670884 R 316057 CDS YP_570440.1 91977781 4023825 complement(3672201..3673412) 1 NC_007958.1 L-carnitine dehydratase/bile acid-inducible protein F 3673412 4023825 RPD_3315 Rhodopseudomonas palustris BisB5 L-carnitine dehydratase/bile acid-inducible protein F YP_570440.1 3672201 R 316057 CDS YP_570441.1 91977782 4023826 3673654..3674547 1 NC_007958.1 hypothetical protein 3674547 4023826 RPD_3316 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570441.1 3673654 D 316057 CDS YP_570442.1 91977783 4023827 complement(3674799..3676325) 1 NC_007958.1 AMP-dependent synthetase and ligase 3676325 4023827 RPD_3317 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_570442.1 3674799 R 316057 CDS YP_570443.1 91977784 4023828 complement(3676349..3677518) 1 NC_007958.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3677518 4023828 RPD_3318 Rhodopseudomonas palustris BisB5 acetyl-CoA acetyltransferase YP_570443.1 3676349 R 316057 CDS YP_570444.1 91977785 4023829 complement(3677660..3678646) 1 NC_007958.1 NAD-dependent epimerase/dehydratase 3678646 4023829 RPD_3319 Rhodopseudomonas palustris BisB5 NAD-dependent epimerase/dehydratase YP_570444.1 3677660 R 316057 CDS YP_570445.1 91977786 4023830 complement(3678818..3679738) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 3679738 4023830 RPD_3320 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_570445.1 3678818 R 316057 CDS YP_570446.1 91977787 4023831 complement(3679731..3680684) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 3680684 4023831 RPD_3321 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_570446.1 3679731 R 316057 CDS YP_570447.1 91977788 4023832 complement(3680943..3682268) 1 NC_007958.1 twin-arginine translocation pathway signal 3682268 4023832 RPD_3322 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_570447.1 3680943 R 316057 CDS YP_570448.1 91977789 4023833 complement(3682356..3683420) 1 NC_007958.1 ABC transporter-like protein 3683420 4023833 RPD_3323 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570448.1 3682356 R 316057 CDS YP_570449.1 91977790 4023834 3683658..3685466 1 NC_007958.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 3685466 4023834 RPD_3324 Rhodopseudomonas palustris BisB5 dihydroxy-acid dehydratase YP_570449.1 3683658 D 316057 CDS YP_570450.1 91977791 4023835 3685699..3686433 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 3686433 4023835 RPD_3325 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570450.1 3685699 D 316057 CDS YP_570451.1 91977792 4023836 3686447..3687196 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 3687196 4023836 RPD_3326 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570451.1 3686447 D 316057 CDS YP_570452.1 91977793 4023837 3687315..3687605 1 NC_007958.1 hypothetical protein 3687605 4023837 RPD_3327 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570452.1 3687315 D 316057 CDS YP_570453.1 91977794 4023838 3687608..3688171 1 NC_007958.1 regulatory protein TetR 3688171 4023838 RPD_3328 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_570453.1 3687608 D 316057 CDS YP_570454.1 91977795 4023839 3688254..3689414 1 NC_007958.1 secretion protein HlyD 3689414 4023839 RPD_3329 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_570454.1 3688254 D 316057 CDS YP_570455.1 91977796 4023840 3689464..3692592 1 NC_007958.1 hydrophobe/amphiphile efflux-1 HAE1 3692592 4023840 RPD_3330 Rhodopseudomonas palustris BisB5 hydrophobe/amphiphile efflux-1 HAE1 YP_570455.1 3689464 D 316057 CDS YP_570456.1 91977797 4023841 complement(3692751..3693545) 1 NC_007958.1 TonB-like protein 3693545 4023841 RPD_3331 Rhodopseudomonas palustris BisB5 TonB-like protein YP_570456.1 3692751 R 316057 CDS YP_570457.1 91977798 4023842 complement(3693642..3694094) 1 NC_007958.1 biopolymer transport protein ExbD/TolR 3694094 4023842 RPD_3332 Rhodopseudomonas palustris BisB5 biopolymer transport protein ExbD/TolR YP_570457.1 3693642 R 316057 CDS YP_570458.1 91977799 4023843 complement(3694098..3694982) 1 NC_007958.1 MotA/TolQ/ExbB proton channel 3694982 4023843 RPD_3333 Rhodopseudomonas palustris BisB5 MotA/TolQ/ExbB proton channel YP_570458.1 3694098 R 316057 CDS YP_570459.1 91977800 4023844 complement(3694979..3695668) 1 NC_007958.1 putative hydroxylase 3695668 4023844 RPD_3334 Rhodopseudomonas palustris BisB5 putative hydroxylase YP_570459.1 3694979 R 316057 CDS YP_570460.1 91977801 4023845 complement(3695693..3698077) 1 NC_007958.1 TonB-dependent receptor, plug 3698077 4023845 RPD_3335 Rhodopseudomonas palustris BisB5 TonB-dependent receptor, plug YP_570460.1 3695693 R 316057 CDS YP_570461.1 91977802 4023846 complement(3698314..3698559) 1 NC_007958.1 hypothetical protein 3698559 4023846 RPD_3336 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570461.1 3698314 R 316057 CDS YP_570462.1 91977803 4023847 3698808..3700937 1 NC_007958.1 sensory box histidine kinase/response regulator 3700937 4023847 RPD_3337 Rhodopseudomonas palustris BisB5 sensory box histidine kinase/response regulator YP_570462.1 3698808 D 316057 CDS YP_570463.1 91977804 4023848 3700934..3701314 1 NC_007958.1 hypothetical protein 3701314 4023848 RPD_3338 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570463.1 3700934 D 316057 CDS YP_570464.1 91977805 4023850 complement(3702215..3703342) 1 NC_007958.1 putative OpgC protein 3703342 4023850 RPD_3339 Rhodopseudomonas palustris BisB5 putative OpgC protein YP_570464.1 3702215 R 316057 CDS YP_570465.1 91977806 4023851 complement(3703394..3703762) 1 NC_007958.1 hypothetical protein 3703762 4023851 RPD_3340 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570465.1 3703394 R 316057 CDS YP_570466.1 91977807 4023852 complement(3703762..3706974) 1 NC_007958.1 heavy metal efflux pump CzcA 3706974 4023852 RPD_3341 Rhodopseudomonas palustris BisB5 heavy metal efflux pump CzcA YP_570466.1 3703762 R 316057 CDS YP_570467.1 91977808 4023853 complement(3707053..3708048) 1 NC_007958.1 secretion protein HlyD 3708048 4023853 RPD_3342 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_570467.1 3707053 R 316057 CDS YP_570468.1 91977809 4023854 complement(3708045..3709316) 1 NC_007958.1 outer membrane efflux protein 3709316 4023854 RPD_3343 Rhodopseudomonas palustris BisB5 outer membrane efflux protein YP_570468.1 3708045 R 316057 CDS YP_570469.1 91977810 4023855 complement(3709370..3709795) 1 NC_007958.1 hypothetical protein 3709795 4023855 RPD_3344 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570469.1 3709370 R 316057 CDS YP_570470.1 91977811 4023856 complement(3710115..3710465) 1 NC_007958.1 S-adenosylmethionine decarboxylase-like 3710465 4023856 RPD_3345 Rhodopseudomonas palustris BisB5 S-adenosylmethionine decarboxylase-like YP_570470.1 3710115 R 316057 CDS YP_570471.1 91977812 4023857 3710570..3711724 1 NC_007958.1 hypothetical protein 3711724 4023857 RPD_3346 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570471.1 3710570 D 316057 CDS YP_570472.1 91977813 4023858 3711803..3712270 1 NC_007958.1 GCN5-like N-acetyltransferase 3712270 4023858 RPD_3347 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_570472.1 3711803 D 316057 CDS YP_570473.1 91977814 4023859 complement(3712360..3713022) 1 NC_007958.1 hypothetical protein 3713022 4023859 RPD_3348 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570473.1 3712360 R 316057 CDS YP_570474.1 91977815 4023860 complement(3713026..3714525) 1 NC_007958.1 peptidase S1C, Do 3714525 4023860 RPD_3349 Rhodopseudomonas palustris BisB5 peptidase S1C, Do YP_570474.1 3713026 R 316057 CDS YP_570475.1 91977816 4023861 complement(3714723..3714923) 1 NC_007958.1 hypothetical protein 3714923 4023861 RPD_3350 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570475.1 3714723 R 316057 CDS YP_570476.1 91977817 4023862 complement(3715081..3716016) 1 NC_007958.1 HflC protein 3716016 4023862 RPD_3351 Rhodopseudomonas palustris BisB5 HflC protein YP_570476.1 3715081 R 316057 CDS YP_570477.1 91977818 4023863 complement(3716013..3717182) 1 NC_007958.1 HflK protein 3717182 4023863 RPD_3352 Rhodopseudomonas palustris BisB5 HflK protein YP_570477.1 3716013 R 316057 CDS YP_570478.1 91977819 4023864 complement(3717336..3717875) 1 NC_007958.1 dihydrofolate reductase 3717875 4023864 RPD_3353 Rhodopseudomonas palustris BisB5 dihydrofolate reductase YP_570478.1 3717336 R 316057 CDS YP_570479.1 91977820 4023865 complement(3717872..3718666) 1 NC_007958.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 3718666 thyA 4023865 thyA Rhodopseudomonas palustris BisB5 thymidylate synthase YP_570479.1 3717872 R 316057 CDS YP_570480.1 91977821 4023866 complement(3718823..3719836) 1 NC_007958.1 hypothetical protein 3719836 4023866 RPD_3355 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570480.1 3718823 R 316057 CDS YP_570481.1 91977822 4023867 complement(3720206..3721192) 1 NC_007958.1 hypothetical protein 3721192 4023867 RPD_3356 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570481.1 3720206 R 316057 CDS YP_570482.1 91977823 4023868 complement(3721295..3722809) 1 NC_007958.1 hypothetical protein 3722809 4023868 RPD_3357 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570482.1 3721295 R 316057 CDS YP_570483.1 91977824 4023869 complement(3722819..3723319) 1 NC_007958.1 hypothetical protein 3723319 4023869 RPD_3358 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570483.1 3722819 R 316057 CDS YP_570484.1 91977825 4023871 3724150..3724734 1 NC_007958.1 hypothetical protein 3724734 4023871 RPD_3359 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570484.1 3724150 D 316057 CDS YP_570485.1 91977826 4023872 3724921..3726339 1 NC_007958.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 3726339 fumC 4023872 fumC Rhodopseudomonas palustris BisB5 fumarate hydratase YP_570485.1 3724921 D 316057 CDS YP_570486.1 91977827 4023873 3726606..3726794 1 NC_007958.1 hypothetical protein 3726794 4023873 RPD_3361 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570486.1 3726606 D 316057 CDS YP_570487.1 91977828 4023874 3726791..3727066 1 NC_007958.1 hypothetical protein 3727066 4023874 RPD_3362 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570487.1 3726791 D 316057 CDS YP_570488.1 91977829 4023875 complement(3727093..3731019) 1 NC_007958.1 AsmA 3731019 4023875 RPD_3363 Rhodopseudomonas palustris BisB5 AsmA YP_570488.1 3727093 R 316057 CDS YP_570489.1 91977830 4023876 complement(3731155..3732582) 1 NC_007958.1 FAD linked oxidase-like protein 3732582 4023876 RPD_3364 Rhodopseudomonas palustris BisB5 FAD linked oxidase-like protein YP_570489.1 3731155 R 316057 CDS YP_570490.1 91977831 4023877 3732652..3733191 1 NC_007958.1 thioesterase-like protein 3733191 4023877 RPD_3365 Rhodopseudomonas palustris BisB5 thioesterase-like protein YP_570490.1 3732652 D 316057 CDS YP_570491.1 91977832 4023878 complement(3733201..3733374) 1 NC_007958.1 hypothetical protein 3733374 4023878 RPD_3366 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570491.1 3733201 R 316057 CDS YP_570492.1 91977833 4023879 3733693..3736236 1 NC_007958.1 UvrD/REP helicase 3736236 4023879 RPD_3367 Rhodopseudomonas palustris BisB5 UvrD/REP helicase YP_570492.1 3733693 D 316057 CDS YP_570493.1 91977834 4023880 complement(3736240..3738741) 1 NC_007958.1 ATPase-like ATP-binding protein 3738741 4023880 RPD_3368 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_570493.1 3736240 R 316057 CDS YP_570494.1 91977835 4023881 3739023..3739490 1 NC_007958.1 hypothetical protein 3739490 4023881 RPD_3369 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570494.1 3739023 D 316057 CDS YP_570495.1 91977836 4023882 3739649..3740569 1 NC_007958.1 ABC transporter-like protein 3740569 4023882 RPD_3370 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570495.1 3739649 D 316057 CDS YP_570496.1 91977837 4023883 3740572..3741333 1 NC_007958.1 hypothetical protein 3741333 4023883 RPD_3371 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570496.1 3740572 D 316057 CDS YP_570497.1 91977838 4023884 complement(3741422..3741763) 1 NC_007958.1 hypothetical protein 3741763 4023884 RPD_3372 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570497.1 3741422 R 316057 CDS YP_570498.1 91977839 4023885 3741993..3742805 1 NC_007958.1 hypothetical protein 3742805 4023885 RPD_3373 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570498.1 3741993 D 316057 CDS YP_570499.1 91977840 4023886 complement(3742868..3745147) 1 NC_007958.1 hypothetical protein 3745147 4023886 RPD_3374 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570499.1 3742868 R 316057 CDS YP_570500.1 91977841 4023887 3745433..3747043 1 NC_007958.1 FAD dependent oxidoreductase 3747043 4023887 RPD_3375 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_570500.1 3745433 D 316057 CDS YP_570501.1 91977842 4023888 complement(3747219..3747614) 1 NC_007958.1 hypothetical protein 3747614 4023888 RPD_3376 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570501.1 3747219 R 316057 CDS YP_570502.1 91977843 4023889 3747866..3748753 1 NC_007958.1 ribosomal L11 methyltransferase 3748753 4023889 RPD_3377 Rhodopseudomonas palustris BisB5 ribosomal L11 methyltransferase YP_570502.1 3747866 D 316057 CDS YP_570503.1 91977844 4023890 complement(3748757..3748954) 1 NC_007958.1 hypothetical protein 3748954 4023890 RPD_3378 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570503.1 3748757 R 316057 CDS YP_570504.1 91977845 4023891 3749123..3750952 1 NC_007958.1 peptidase M24 3750952 4023891 RPD_3379 Rhodopseudomonas palustris BisB5 peptidase M24 YP_570504.1 3749123 D 316057 CDS YP_570505.1 91977846 4023892 3751209..3752543 1 NC_007958.1 Bcr/CflA subfamily drug resistance transporter 3752543 4023892 RPD_3380 Rhodopseudomonas palustris BisB5 Bcr/CflA subfamily drug resistance transporter YP_570505.1 3751209 D 316057 CDS YP_570506.1 91977847 4023893 complement(3753592..3755736) 1 NC_007958.1 DNA ligase, NAD-dependent 3755736 4023893 RPD_3381 Rhodopseudomonas palustris BisB5 DNA ligase, NAD-dependent YP_570506.1 3753592 R 316057 CDS YP_570507.1 91977848 4023894 3755806..3756168 1 NC_007958.1 excinuclease ABC subunit C 3756168 4023894 RPD_3382 Rhodopseudomonas palustris BisB5 excinuclease ABC subunit C YP_570507.1 3755806 D 316057 CDS YP_570508.1 91977849 4023895 complement(3756340..3758025) 1 NC_007958.1 DNA repair protein RecN 3758025 4023895 RPD_3383 Rhodopseudomonas palustris BisB5 DNA repair protein RecN YP_570508.1 3756340 R 316057 CDS YP_570509.1 91977850 4023896 complement(3758038..3758943) 1 NC_007958.1 putative lipoprotein 3758943 4023896 RPD_3384 Rhodopseudomonas palustris BisB5 putative lipoprotein YP_570509.1 3758038 R 316057 CDS YP_570510.1 91977851 4023897 complement(3759189..3760151) 1 NC_007958.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3760151 lpxC 4023897 lpxC Rhodopseudomonas palustris BisB5 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_570510.1 3759189 R 316057 CDS YP_570511.1 91977852 4023898 complement(3760498..3762285) 1 NC_007958.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 3762285 4023898 RPD_3386 Rhodopseudomonas palustris BisB5 cell division protein FtsZ YP_570511.1 3760498 R 316057 CDS YP_570512.1 91977853 4023899 complement(3762379..3763662) 1 NC_007958.1 cell division protein FtsA 3763662 4023899 RPD_3387 Rhodopseudomonas palustris BisB5 cell division protein FtsA YP_570512.1 3762379 R 316057 CDS YP_570513.1 91977854 4023900 complement(3763701..3764693) 1 NC_007958.1 cell division protein FtsQ 3764693 4023900 RPD_3388 Rhodopseudomonas palustris BisB5 cell division protein FtsQ YP_570513.1 3763701 R 316057 CDS YP_570514.1 91977855 4023901 complement(3764973..3765962) 1 NC_007958.1 D-alanine--D-alanine ligase 3765962 4023901 RPD_3389 Rhodopseudomonas palustris BisB5 D-alanine--D-alanine ligase YP_570514.1 3764973 R 316057 CDS YP_570515.1 91977856 4023902 complement(3766132..3767451) 1 NC_007958.1 hypothetical protein 3767451 4023902 RPD_3390 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570515.1 3766132 R 316057 CDS YP_570516.1 91977857 4023903 3767745..3768581 1 NC_007958.1 hypothetical protein 3768581 4023903 RPD_3391 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570516.1 3767745 D 316057 CDS YP_570517.1 91977858 4023904 complement(3768639..3769571) 1 NC_007958.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 3769571 murB 4023904 murB Rhodopseudomonas palustris BisB5 UDP-N-acetylenolpyruvoylglucosamine reductase YP_570517.1 3768639 R 316057 CDS YP_570518.1 91977859 4023905 complement(3769609..3771012) 1 NC_007958.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3771012 murC 4023905 murC Rhodopseudomonas palustris BisB5 UDP-N-acetylmuramate--L-alanine ligase YP_570518.1 3769609 R 316057 CDS YP_570519.1 91977860 4023906 complement(3771145..3772245) 1 NC_007958.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 3772245 murG 4023906 murG Rhodopseudomonas palustris BisB5 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_570519.1 3771145 R 316057 CDS YP_570520.1 91977861 4023907 complement(3772250..3773395) 1 NC_007958.1 cell cycle protein 3773395 4023907 RPD_3395 Rhodopseudomonas palustris BisB5 cell cycle protein YP_570520.1 3772250 R 316057 CDS YP_570521.1 91977862 4023908 complement(3773615..3775027) 1 NC_007958.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 3775027 murD 4023908 murD Rhodopseudomonas palustris BisB5 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_570521.1 3773615 R 316057 CDS YP_570522.1 91977863 4023909 complement(3775185..3776270) 1 NC_007958.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 3776270 mraY 4023909 mraY Rhodopseudomonas palustris BisB5 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_570522.1 3775185 R 316057 CDS YP_570523.1 91977864 4023910 complement(3776281..3777720) 1 NC_007958.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase 3777720 4023910 RPD_3398 Rhodopseudomonas palustris BisB5 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase YP_570523.1 3776281 R 316057 CDS YP_570524.1 91977865 4023911 complement(3777717..3779189) 1 NC_007958.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 3779189 murE 4023911 murE Rhodopseudomonas palustris BisB5 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_570524.1 3777717 R 316057 CDS YP_570525.1 91977866 4023912 complement(3779307..3781061) 1 NC_007958.1 peptidoglycan glycosyltransferase 3781061 4023912 RPD_3400 Rhodopseudomonas palustris BisB5 peptidoglycan glycosyltransferase YP_570525.1 3779307 R 316057 CDS YP_570526.1 91977867 4023913 complement(3781058..3781441) 1 NC_007958.1 hypothetical protein 3781441 4023913 RPD_3401 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570526.1 3781058 R 316057 CDS YP_570527.1 91977868 4023914 complement(3781438..3782634) 1 NC_007958.1 S-adenosyl-methyltransferase MraW 3782634 mraW 4023914 mraW Rhodopseudomonas palustris BisB5 S-adenosyl-methyltransferase MraW YP_570527.1 3781438 R 316057 CDS YP_570528.1 91977869 4023915 3782937..3783803 1 NC_007958.1 N-acetylmuramoyl-L-alanine amidase 3783803 4023915 RPD_3403 Rhodopseudomonas palustris BisB5 N-acetylmuramoyl-L-alanine amidase YP_570528.1 3782937 D 316057 CDS YP_570529.1 91977870 4023917 complement(3784424..3786226) 1 NC_007958.1 ABC transporter-like protein 3786226 4023917 RPD_3404 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570529.1 3784424 R 316057 CDS YP_570530.1 91977871 4023918 complement(3786558..3788144) 1 NC_007958.1 EmrB/QacA family drug resistance transporter 3788144 4023918 RPD_3405 Rhodopseudomonas palustris BisB5 EmrB/QacA family drug resistance transporter YP_570530.1 3786558 R 316057 CDS YP_570531.1 91977872 4023919 complement(3788171..3789430) 1 NC_007958.1 secretion protein HlyD 3789430 4023919 RPD_3406 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_570531.1 3788171 R 316057 CDS YP_570532.1 91977873 4023920 3789603..3790259 1 NC_007958.1 TetR family transcriptional regulator 3790259 4023920 RPD_3407 Rhodopseudomonas palustris BisB5 TetR family transcriptional regulator YP_570532.1 3789603 D 316057 CDS YP_570533.1 91977874 4023921 complement(3790299..3791546) 1 NC_007958.1 extensin-like protein 3791546 4023921 RPD_3408 Rhodopseudomonas palustris BisB5 extensin-like protein YP_570533.1 3790299 R 316057 CDS YP_570534.1 91977875 4023922 complement(3791641..3793596) 1 NC_007958.1 chemotaxis sensory transducer 3793596 4023922 RPD_3409 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_570534.1 3791641 R 316057 CDS YP_570535.1 91977876 4023923 3793807..3794043 1 NC_007958.1 hypothetical protein 3794043 4023923 RPD_3410 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570535.1 3793807 D 316057 CDS YP_570536.1 91977877 4023924 complement(3794069..3797461) 1 NC_007958.1 outer membrane autotransporter barrel domain-containing protein 3797461 4023924 RPD_3411 Rhodopseudomonas palustris BisB5 outer membrane autotransporter barrel domain-containing protein YP_570536.1 3794069 R 316057 CDS YP_570537.1 91977878 4023925 3797810..3798763 1 NC_007958.1 regulatory protein LysR 3798763 4023925 RPD_3412 Rhodopseudomonas palustris BisB5 regulatory protein LysR YP_570537.1 3797810 D 316057 CDS YP_570538.1 91977879 4023926 3798800..3799432 1 NC_007958.1 epoxide hydrolase-like phosphatase 3799432 4023926 RPD_3413 Rhodopseudomonas palustris BisB5 epoxide hydrolase-like phosphatase YP_570538.1 3798800 D 316057 CDS YP_570539.1 91977880 4023927 3799558..3799893 1 NC_007958.1 ArsR family transcriptional regulator 3799893 4023927 RPD_3414 Rhodopseudomonas palustris BisB5 ArsR family transcriptional regulator YP_570539.1 3799558 D 316057 CDS YP_570540.1 91977881 4023928 3799890..3800945 1 NC_007958.1 permease 3800945 4023928 RPD_3415 Rhodopseudomonas palustris BisB5 permease YP_570540.1 3799890 D 316057 CDS YP_570541.1 91977882 4023929 3801021..3801257 1 NC_007958.1 thiol-disulfide isomerase and thioredoxins 3801257 4023929 RPD_3416 Rhodopseudomonas palustris BisB5 thiol-disulfide isomerase and thioredoxins YP_570541.1 3801021 D 316057 CDS YP_570542.1 91977883 4023930 complement(3801254..3802297) 1 NC_007958.1 bile acid:sodium symporter 3802297 4023930 RPD_3417 Rhodopseudomonas palustris BisB5 bile acid:sodium symporter YP_570542.1 3801254 R 316057 CDS YP_570543.1 91977884 4023931 complement(3802499..3802924) 1 NC_007958.1 arsenate reductase 3802924 4023931 RPD_3418 Rhodopseudomonas palustris BisB5 arsenate reductase YP_570543.1 3802499 R 316057 CDS YP_570544.1 91977885 4023932 complement(3802924..3803451) 1 NC_007958.1 low molecular weight phosphotyrosine protein phosphatase 3803451 4023932 RPD_3419 Rhodopseudomonas palustris BisB5 low molecular weight phosphotyrosine protein phosphatase YP_570544.1 3802924 R 316057 CDS YP_570545.1 91977886 4023933 complement(3803444..3803839) 1 NC_007958.1 regulatory protein ArsR 3803839 4023933 RPD_3420 Rhodopseudomonas palustris BisB5 regulatory protein ArsR YP_570545.1 3803444 R 316057 CDS YP_570546.1 91977887 4023934 3803914..3804231 1 NC_007958.1 regulatory protein ArsR 3804231 4023934 RPD_3421 Rhodopseudomonas palustris BisB5 regulatory protein ArsR YP_570546.1 3803914 D 316057 CDS YP_570547.1 91977888 4023935 3804328..3805143 1 NC_007958.1 in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine; arsenite S-adenosylmethyltransferase 3805143 arsM 4023935 arsM Rhodopseudomonas palustris BisB5 arsenite S-adenosylmethyltransferase YP_570547.1 3804328 D 316057 CDS YP_570548.1 91977889 4023936 complement(3805216..3806664) 1 NC_007958.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase 3806664 tnaA 4023936 tnaA Rhodopseudomonas palustris BisB5 tryptophanase YP_570548.1 3805216 R 316057 CDS YP_570549.1 91977890 4023937 3806935..3807633 1 NC_007958.1 hypothetical protein 3807633 4023937 RPD_3424 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570549.1 3806935 D 316057 CDS YP_570550.1 91977891 4023938 3807844..3809379 1 NC_007958.1 hypothetical protein 3809379 4023938 RPD_3425 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570550.1 3807844 D 316057 CDS YP_570551.1 91977892 4023939 complement(3809515..3810051) 1 NC_007958.1 hypothetical protein 3810051 4023939 RPD_3426 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570551.1 3809515 R 316057 CDS YP_570552.1 91977893 4023940 complement(3810410..3811897) 1 NC_007958.1 hypothetical protein 3811897 4023940 RPD_3427 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570552.1 3810410 R 316057 CDS YP_570553.1 91977894 4023942 3812239..3813348 1 NC_007958.1 glycine oxidase ThiO 3813348 4023942 RPD_3428 Rhodopseudomonas palustris BisB5 glycine oxidase ThiO YP_570553.1 3812239 D 316057 CDS YP_570554.1 91977895 4023943 3813345..3813536 1 NC_007958.1 thiamine biosynthesis protein ThiS 3813536 4023943 RPD_3429 Rhodopseudomonas palustris BisB5 thiamine biosynthesis protein ThiS YP_570554.1 3813345 D 316057 CDS YP_570555.1 91977896 4023944 3813831..3814613 1 NC_007958.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 3814613 thiG 4023944 thiG Rhodopseudomonas palustris BisB5 thiazole synthase YP_570555.1 3813831 D 316057 CDS YP_570556.1 91977897 4023945 3814600..3815208 1 NC_007958.1 thiamine-phosphate pyrophosphorylase 3815208 4023945 RPD_3431 Rhodopseudomonas palustris BisB5 thiamine-phosphate pyrophosphorylase YP_570556.1 3814600 D 316057 CDS YP_570557.1 91977898 4023946 3815473..3817398 1 NC_007958.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 3817398 4023946 RPD_3432 Rhodopseudomonas palustris BisB5 thiamine biosynthesis protein ThiC YP_570557.1 3815473 D 316057 CDS YP_570558.1 91977899 4023947 complement(3817559..3818338) 1 NC_007958.1 hypothetical protein 3818338 4023947 RPD_3433 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570558.1 3817559 R 316057 CDS YP_570559.1 91977900 4023948 complement(3818910..3819143) 1 NC_007958.1 hypothetical protein 3819143 4023948 RPD_3434 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570559.1 3818910 R 316057 CDS YP_570560.1 91977901 4023950 3819600..3819983 1 NC_007958.1 hypothetical protein 3819983 4023950 RPD_3436 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570560.1 3819600 D 316057 CDS YP_570561.1 91977902 4023951 complement(3821432..3821857) 1 NC_007958.1 hypothetical protein 3821857 4023951 RPD_3437 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570561.1 3821432 R 316057 CDS YP_570562.1 91977903 4023952 3822059..3822625 1 NC_007958.1 endoribonuclease L-PSP 3822625 4023952 RPD_3438 Rhodopseudomonas palustris BisB5 endoribonuclease L-PSP YP_570562.1 3822059 D 316057 CDS YP_570563.1 91977904 4023953 3822817..3823830 1 NC_007958.1 hypothetical protein 3823830 4023953 RPD_3439 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570563.1 3822817 D 316057 CDS YP_570564.1 91977905 4023954 3824062..3825243 1 NC_007958.1 putative cytochrome P450 3825243 4023954 RPD_3440 Rhodopseudomonas palustris BisB5 putative cytochrome P450 YP_570564.1 3824062 D 316057 CDS YP_570565.1 91977906 4023955 3825464..3826090 1 NC_007958.1 SOUL heme-binding protein 3826090 4023955 RPD_3441 Rhodopseudomonas palustris BisB5 SOUL heme-binding protein YP_570565.1 3825464 D 316057 CDS YP_570566.1 91977907 4023956 3826158..3826403 1 NC_007958.1 hypothetical protein 3826403 4023956 RPD_3442 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570566.1 3826158 D 316057 CDS YP_570567.1 91977908 4023957 3826529..3827005 1 NC_007958.1 hypothetical protein 3827005 4023957 RPD_3443 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570567.1 3826529 D 316057 CDS YP_570568.1 91977909 4023958 3827119..3827670 1 NC_007958.1 hypothetical protein 3827670 4023958 RPD_3444 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570568.1 3827119 D 316057 CDS YP_570569.1 91977910 4023959 complement(3827713..3828195) 1 NC_007958.1 bacterioferritin 3828195 4023959 RPD_3445 Rhodopseudomonas palustris BisB5 bacterioferritin YP_570569.1 3827713 R 316057 CDS YP_570570.1 91977911 4023960 3828345..3828587 1 NC_007958.1 hypothetical protein 3828587 4023960 RPD_3446 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570570.1 3828345 D 316057 CDS YP_570571.1 91977912 4023961 3828994..3829302 1 NC_007958.1 hypothetical protein 3829302 4023961 RPD_3447 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570571.1 3828994 D 316057 CDS YP_570572.1 91977913 4023962 3829522..3829806 1 NC_007958.1 hypothetical protein 3829806 4023962 RPD_3448 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570572.1 3829522 D 316057 CDS YP_570573.1 91977914 4023963 complement(3829927..3831255) 1 NC_007958.1 lytic murein transglycosylase 3831255 4023963 RPD_3449 Rhodopseudomonas palustris BisB5 lytic murein transglycosylase YP_570573.1 3829927 R 316057 CDS YP_570574.1 91977915 4023964 complement(3831236..3831829) 1 NC_007958.1 hypothetical protein 3831829 4023964 RPD_3450 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570574.1 3831236 R 316057 CDS YP_570575.1 91977916 4023965 complement(3831949..3832719) 1 NC_007958.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 3832719 4023965 RPD_3451 Rhodopseudomonas palustris BisB5 trans-aconitate 2-methyltransferase YP_570575.1 3831949 R 316057 CDS YP_570576.1 91977917 4023966 complement(3833015..3834664) 1 NC_007958.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 3834664 4023966 RPD_3452 Rhodopseudomonas palustris BisB5 putative ABC transporter ATP-binding protein YP_570576.1 3833015 R 316057 CDS YP_570577.1 91977918 4023967 3834898..3835104 1 NC_007958.1 hypothetical protein 3835104 4023967 RPD_3453 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570577.1 3834898 D 316057 CDS YP_570578.1 91977919 4023968 complement(3835200..3836432) 1 NC_007958.1 hypothetical protein 3836432 4023968 RPD_3454 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570578.1 3835200 R 316057 CDS YP_570579.1 91977920 4023969 complement(3836627..3836872) 1 NC_007958.1 hypothetical protein 3836872 4023969 RPD_3455 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570579.1 3836627 R 316057 CDS YP_570580.1 91977921 4023970 3837155..3837859 1 NC_007958.1 hypothetical protein 3837859 4023970 RPD_3456 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570580.1 3837155 D 316057 CDS YP_570581.1 91977922 4023971 complement(3837917..3838774) 1 NC_007958.1 3-mercaptopyruvate sulfurtransferase 3838774 4023971 RPD_3457 Rhodopseudomonas palustris BisB5 3-mercaptopyruvate sulfurtransferase YP_570581.1 3837917 R 316057 CDS YP_570582.1 91977923 4023972 complement(3838888..3839310) 1 NC_007958.1 rhodanese-like protein 3839310 4023972 RPD_3458 Rhodopseudomonas palustris BisB5 rhodanese-like protein YP_570582.1 3838888 R 316057 CDS YP_570583.1 91977924 4023973 complement(3839357..3840592) 1 NC_007958.1 hypothetical protein 3840592 4023973 RPD_3459 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570583.1 3839357 R 316057 CDS YP_570584.1 91977925 4023974 3840700..3842634 1 NC_007958.1 GGDEF domain-containing protein 3842634 4023974 RPD_3460 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_570584.1 3840700 D 316057 CDS YP_570585.1 91977926 4023975 3842737..3842991 1 NC_007958.1 transglycosylase-associated protein 3842991 4023975 RPD_3461 Rhodopseudomonas palustris BisB5 transglycosylase-associated protein YP_570585.1 3842737 D 316057 CDS YP_570586.1 91977927 4023976 3843096..3843938 1 NC_007958.1 ATPase 3843938 4023976 RPD_3462 Rhodopseudomonas palustris BisB5 ATPase YP_570586.1 3843096 D 316057 CDS YP_570587.1 91977928 4023977 complement(3844038..3844322) 1 NC_007958.1 hypothetical protein 3844322 4023977 RPD_3463 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570587.1 3844038 R 316057 CDS YP_570588.1 91977929 4023978 complement(3844438..3845052) 1 NC_007958.1 GCN5-like N-acetyltransferase 3845052 4023978 RPD_3464 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_570588.1 3844438 R 316057 CDS YP_570589.1 91977930 4023979 complement(3845220..3846149) 1 NC_007958.1 senescence marker protein-30 (SMP-30) 3846149 4023979 RPD_3465 Rhodopseudomonas palustris BisB5 senescence marker protein-30 (SMP-30) YP_570589.1 3845220 R 316057 CDS YP_570590.1 91977931 4023980 complement(3846302..3846652) 1 NC_007958.1 hypothetical protein 3846652 4023980 RPD_3466 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570590.1 3846302 R 316057 CDS YP_570591.1 91977932 4023981 3846766..3847050 1 NC_007958.1 excinuclease ABC subunit C 3847050 4023981 RPD_3467 Rhodopseudomonas palustris BisB5 excinuclease ABC subunit C YP_570591.1 3846766 D 316057 CDS YP_570592.1 91977933 4023982 complement(3847622..3849400) 1 NC_007958.1 radical SAM family protein 3849400 4023982 RPD_3468 Rhodopseudomonas palustris BisB5 radical SAM family protein YP_570592.1 3847622 R 316057 CDS YP_570593.1 91977934 4023983 complement(3849673..3849942) 1 NC_007958.1 hypothetical protein 3849942 4023983 RPD_3469 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570593.1 3849673 R 316057 CDS YP_570594.1 91977935 4023984 complement(3849939..3850415) 1 NC_007958.1 glutathione peroxidase 3850415 4023984 RPD_3470 Rhodopseudomonas palustris BisB5 glutathione peroxidase YP_570594.1 3849939 R 316057 CDS YP_570595.1 91977936 4023985 complement(3850432..3851829) 1 NC_007958.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3851829 4023985 RPD_3471 Rhodopseudomonas palustris BisB5 amidase YP_570595.1 3850432 R 316057 CDS YP_570596.1 91977937 4023986 complement(3851897..3852154) 1 NC_007958.1 hypothetical protein 3852154 4023986 RPD_3472 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570596.1 3851897 R 316057 CDS YP_570597.1 91977938 4023987 3852277..3853266 1 NC_007958.1 proline iminopeptidase 3853266 4023987 RPD_3473 Rhodopseudomonas palustris BisB5 proline iminopeptidase YP_570597.1 3852277 D 316057 CDS YP_570598.1 91977939 4023988 3853655..3856507 1 NC_007958.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate; bifunctional transaldolase/phosoglucose isomerase 3856507 4023988 RPD_3474 Rhodopseudomonas palustris BisB5 bifunctional transaldolase/phosoglucose isomerase YP_570598.1 3853655 D 316057 CDS YP_570599.1 91977940 4023989 3856565..3857605 1 NC_007958.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase-like protein 3857605 4023989 RPD_3475 Rhodopseudomonas palustris BisB5 6-phosphogluconate dehydrogenase-like protein YP_570599.1 3856565 D 316057 CDS YP_570600.1 91977941 4023990 3857602..3859113 1 NC_007958.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3859113 4023990 RPD_3476 Rhodopseudomonas palustris BisB5 glucose-6-phosphate 1-dehydrogenase YP_570600.1 3857602 D 316057 CDS YP_570601.1 91977942 4023991 3859114..3859860 1 NC_007958.1 6-phosphogluconolactonase 3859860 4023991 RPD_3477 Rhodopseudomonas palustris BisB5 6-phosphogluconolactonase YP_570601.1 3859114 D 316057 CDS YP_570602.1 91977943 4023992 3859886..3860389 1 NC_007958.1 carbohydrate kinase, thermoresistant glucokinase 3860389 4023992 RPD_3478 Rhodopseudomonas palustris BisB5 carbohydrate kinase, thermoresistant glucokinase YP_570602.1 3859886 D 316057 CDS YP_570603.1 91977944 4023993 3860389..3861201 1 NC_007958.1 Cof protein 3861201 4023993 RPD_3479 Rhodopseudomonas palustris BisB5 Cof protein YP_570603.1 3860389 D 316057 CDS YP_570604.1 91977945 4023994 complement(3861320..3863125) 1 NC_007958.1 glycoside hydrolase 15-like protein 3863125 4023994 RPD_3480 Rhodopseudomonas palustris BisB5 glycoside hydrolase 15-like protein YP_570604.1 3861320 R 316057 CDS YP_570605.1 91977946 4023995 complement(3863115..3865088) 1 NC_007958.1 4-alpha-glucanotransferase 3865088 4023995 RPD_3481 Rhodopseudomonas palustris BisB5 4-alpha-glucanotransferase YP_570605.1 3863115 R 316057 CDS YP_570606.1 91977947 4023996 3865277..3867232 1 NC_007958.1 alpha amylase catalytic subunit 3867232 4023996 RPD_3482 Rhodopseudomonas palustris BisB5 alpha amylase catalytic subunit YP_570606.1 3865277 D 316057 CDS YP_570607.1 91977948 4023997 3867244..3870546 1 NC_007958.1 trehalose synthase-like protein 3870546 4023997 RPD_3483 Rhodopseudomonas palustris BisB5 trehalose synthase-like protein YP_570607.1 3867244 D 316057 CDS YP_570608.1 91977949 4023998 3870543..3872693 1 NC_007958.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 3872693 4023998 RPD_3484 Rhodopseudomonas palustris BisB5 glycogen branching enzyme YP_570608.1 3870543 D 316057 CDS YP_570609.1 91977950 4023999 3872696..3874774 1 NC_007958.1 glycogen debranching protein GlgX 3874774 4023999 RPD_3485 Rhodopseudomonas palustris BisB5 glycogen debranching protein GlgX YP_570609.1 3872696 D 316057 CDS YP_570610.1 91977951 4024000 3874771..3876534 1 NC_007958.1 malto-oligosyltrehalose trehalohydrolase 3876534 4024000 RPD_3486 Rhodopseudomonas palustris BisB5 malto-oligosyltrehalose trehalohydrolase YP_570610.1 3874771 D 316057 CDS YP_570611.1 91977952 4024001 3876534..3879323 1 NC_007958.1 malto-oligosyltrehalose synthase 3879323 4024001 RPD_3487 Rhodopseudomonas palustris BisB5 malto-oligosyltrehalose synthase YP_570611.1 3876534 D 316057 CDS YP_570612.1 91977953 4024002 complement(3879533..3879841) 1 NC_007958.1 hypothetical protein 3879841 4024002 RPD_3488 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570612.1 3879533 R 316057 CDS YP_570613.1 91977954 4024003 3880018..3880182 1 NC_007958.1 hypothetical protein 3880182 4024003 RPD_3489 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570613.1 3880018 D 316057 CDS YP_570614.1 91977955 4024004 complement(3880200..3882992) 1 NC_007958.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 3882992 ligD 4024004 ligD Rhodopseudomonas palustris BisB5 ATP-dependent DNA ligase YP_570614.1 3880200 R 316057 CDS YP_570615.1 91977956 4024005 3883133..3884017 1 NC_007958.1 hypothetical protein 3884017 4024005 RPD_3491 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570615.1 3883133 D 316057 CDS YP_570616.1 91977957 4024006 complement(3884259..3884624) 1 NC_007958.1 hypothetical protein 3884624 4024006 RPD_3492 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570616.1 3884259 R 316057 CDS YP_570617.1 91977958 4024007 complement(3884688..3884972) 1 NC_007958.1 SirA-like 3884972 4024007 RPD_3493 Rhodopseudomonas palustris BisB5 SirA-like YP_570617.1 3884688 R 316057 CDS YP_570618.1 91977959 4024008 3885050..3885682 1 NC_007958.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 3885682 mobA 4024008 mobA Rhodopseudomonas palustris BisB5 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_570618.1 3885050 D 316057 CDS YP_570619.1 91977960 4024009 complement(3885683..3886735) 1 NC_007958.1 alcohol dehydrogenase GroES-like protein 3886735 4024009 RPD_3495 Rhodopseudomonas palustris BisB5 alcohol dehydrogenase GroES-like protein YP_570619.1 3885683 R 316057 CDS YP_570620.1 91977961 4024010 complement(3886814..3887779) 1 NC_007958.1 2-nitropropane dioxygenase 3887779 4024010 RPD_3496 Rhodopseudomonas palustris BisB5 2-nitropropane dioxygenase YP_570620.1 3886814 R 316057 CDS YP_570621.1 91977962 4024011 complement(3887980..3888846) 1 NC_007958.1 urease accessory protein UreF 3888846 4024011 RPD_3497 Rhodopseudomonas palustris BisB5 urease accessory protein UreF YP_570621.1 3887980 R 316057 CDS YP_570622.1 91977963 4024012 complement(3889472..3889771) 1 NC_007958.1 antibiotic biosynthesis monooxygenase 3889771 4024012 RPD_3498 Rhodopseudomonas palustris BisB5 antibiotic biosynthesis monooxygenase YP_570622.1 3889472 R 316057 CDS YP_570623.1 91977964 4024013 complement(3889799..3890098) 1 NC_007958.1 antibiotic biosynthesis monooxygenase 3890098 4024013 RPD_3499 Rhodopseudomonas palustris BisB5 antibiotic biosynthesis monooxygenase YP_570623.1 3889799 R 316057 CDS YP_570624.1 91977965 4024014 complement(3890446..3892158) 1 NC_007958.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3892158 ureC 4024014 ureC Rhodopseudomonas palustris BisB5 urease subunit alpha YP_570624.1 3890446 R 316057 CDS YP_570625.1 91977966 4024015 complement(3892172..3892564) 1 NC_007958.1 PilT protein-like protein 3892564 4024015 RPD_3501 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_570625.1 3892172 R 316057 CDS YP_570626.1 91977967 4024016 complement(3892561..3892845) 1 NC_007958.1 transcriptional regulator AbrB 3892845 4024016 RPD_3502 Rhodopseudomonas palustris BisB5 transcriptional regulator AbrB YP_570626.1 3892561 R 316057 CDS YP_570627.1 91977968 4024017 complement(3892891..3893205) 1 NC_007958.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 3893205 ureB 4024017 ureB Rhodopseudomonas palustris BisB5 urease subunit beta YP_570627.1 3892891 R 316057 CDS YP_570628.1 91977969 4024018 complement(3893215..3893517) 1 NC_007958.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3893517 ureA 4024018 ureA Rhodopseudomonas palustris BisB5 urease subunit gamma YP_570628.1 3893215 R 316057 CDS YP_570629.1 91977970 4024019 complement(3893583..3894434) 1 NC_007958.1 urease accessory protein UreD 3894434 4024019 RPD_3505 Rhodopseudomonas palustris BisB5 urease accessory protein UreD YP_570629.1 3893583 R 316057 CDS YP_570630.1 91977971 4024020 complement(3894471..3895166) 1 NC_007958.1 ABC transporter-like protein 3895166 4024020 RPD_3506 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570630.1 3894471 R 316057 CDS YP_570631.1 91977972 4024021 complement(3895360..3896124) 1 NC_007958.1 ABC transporter-like protein 3896124 4024021 RPD_3507 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570631.1 3895360 R 316057 CDS YP_570632.1 91977973 4024022 complement(3896121..3897314) 1 NC_007958.1 inner-membrane translocator 3897314 4024022 RPD_3508 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_570632.1 3896121 R 316057 CDS YP_570633.1 91977974 4024023 complement(3897676..3899304) 1 NC_007958.1 inner-membrane translocator 3899304 4024023 RPD_3509 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_570633.1 3897676 R 316057 CDS YP_570634.1 91977975 4024024 complement(3899447..3900769) 1 NC_007958.1 twin-arginine translocation pathway signal 3900769 4024024 RPD_3510 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_570634.1 3899447 R 316057 CDS YP_570635.1 91977976 4024025 3901271..3902719 1 NC_007958.1 DEAD/DEAH box helicase-like protein 3902719 4024025 RPD_3511 Rhodopseudomonas palustris BisB5 DEAD/DEAH box helicase-like protein YP_570635.1 3901271 D 316057 CDS YP_570636.1 91977977 4024026 3902743..3903027 1 NC_007958.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 3903027 infA 4024026 infA Rhodopseudomonas palustris BisB5 translation initiation factor IF-1 YP_570636.1 3902743 D 316057 CDS YP_570637.1 91977978 4024027 3903311..3903523 1 NC_007958.1 cold-shock DNA-binding domain-containing protein 3903523 4024027 RPD_3513 Rhodopseudomonas palustris BisB5 cold-shock DNA-binding domain-containing protein YP_570637.1 3903311 D 316057 CDS YP_570638.1 91977979 4024028 complement(3903663..3904289) 1 NC_007958.1 TadE-like 3904289 4024028 RPD_3514 Rhodopseudomonas palustris BisB5 TadE-like YP_570638.1 3903663 R 316057 CDS YP_570639.1 91977980 4024029 complement(3904298..3904843) 1 NC_007958.1 TadE-like 3904843 4024029 RPD_3515 Rhodopseudomonas palustris BisB5 TadE-like YP_570639.1 3904298 R 316057 CDS YP_570640.1 91977981 4024030 complement(3905035..3905520) 1 NC_007958.1 hypothetical protein 3905520 4024030 RPD_3516 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570640.1 3905035 R 316057 CDS YP_570641.1 91977982 4024031 3905825..3906061 1 NC_007958.1 Flp/Fap pilin component 3906061 4024031 RPD_3517 Rhodopseudomonas palustris BisB5 Flp/Fap pilin component YP_570641.1 3905825 D 316057 CDS YP_570642.1 91977983 4024032 3906390..3906914 1 NC_007958.1 peptidase A24A, prepilin type IV 3906914 4024032 RPD_3518 Rhodopseudomonas palustris BisB5 peptidase A24A, prepilin type IV YP_570642.1 3906390 D 316057 CDS YP_570643.1 91977984 4024033 3907039..3907839 1 NC_007958.1 Flp pilus assembly CpaB 3907839 4024033 RPD_3519 Rhodopseudomonas palustris BisB5 Flp pilus assembly CpaB YP_570643.1 3907039 D 316057 CDS YP_570644.1 91977985 4024034 3907853..3909295 1 NC_007958.1 type II and III secretion system protein 3909295 4024034 RPD_3520 Rhodopseudomonas palustris BisB5 type II and III secretion system protein YP_570644.1 3907853 D 316057 CDS YP_570645.1 91977986 4024035 3909315..3910046 1 NC_007958.1 Type IV pili component-like 3910046 4024035 RPD_3521 Rhodopseudomonas palustris BisB5 Type IV pili component-like YP_570645.1 3909315 D 316057 CDS YP_570646.1 91977987 4024036 3910043..3911320 1 NC_007958.1 putative pilus assembly protein cpaE 3911320 4024036 RPD_3522 Rhodopseudomonas palustris BisB5 putative pilus assembly protein cpaE YP_570646.1 3910043 D 316057 CDS YP_570647.1 91977988 4024037 3911342..3912790 1 NC_007958.1 type II secretion system protein E 3912790 4024037 RPD_3523 Rhodopseudomonas palustris BisB5 type II secretion system protein E YP_570647.1 3911342 D 316057 CDS YP_570648.1 91977989 4024038 3912805..3913779 1 NC_007958.1 type II secretion system protein 3913779 4024038 RPD_3524 Rhodopseudomonas palustris BisB5 type II secretion system protein YP_570648.1 3912805 D 316057 CDS YP_570649.1 91977990 4024039 3913791..3914765 1 NC_007958.1 type II secretion system protein 3914765 4024039 RPD_3525 Rhodopseudomonas palustris BisB5 type II secretion system protein YP_570649.1 3913791 D 316057 CDS YP_570650.1 91977991 4024040 complement(3914862..3915707) 1 NC_007958.1 hypothetical protein 3915707 4024040 RPD_3526 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570650.1 3914862 R 316057 CDS YP_570651.1 91977992 4024041 3915781..3917160 1 NC_007958.1 leucyl aminopeptidase 3917160 4024041 RPD_3527 Rhodopseudomonas palustris BisB5 leucyl aminopeptidase YP_570651.1 3915781 D 316057 CDS YP_570652.1 91977993 4024042 3917153..3918004 1 NC_007958.1 NLP/P60 3918004 4024042 RPD_3528 Rhodopseudomonas palustris BisB5 NLP/P60 YP_570652.1 3917153 D 316057 CDS YP_570653.1 91977994 4024043 complement(3917988..3918626) 1 NC_007958.1 nucleoside diphosphate pyrophosphatase 3918626 4024043 RPD_3529 Rhodopseudomonas palustris BisB5 nucleoside diphosphate pyrophosphatase YP_570653.1 3917988 R 316057 CDS YP_570654.1 91977995 4024044 complement(3918634..3920271) 1 NC_007958.1 ABC transporter-like protein 3920271 4024044 RPD_3530 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570654.1 3918634 R 316057 CDS YP_570655.1 91977996 4024045 complement(3920271..3920759) 1 NC_007958.1 PilT protein-like protein 3920759 4024045 RPD_3531 Rhodopseudomonas palustris BisB5 PilT protein-like protein YP_570655.1 3920271 R 316057 CDS YP_570656.1 91977997 4024046 complement(3921007..3922185) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 3922185 4024046 RPD_3532 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_570656.1 3921007 R 316057 CDS YP_570657.1 91977998 4024047 complement(3922185..3923294) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 3923294 4024047 RPD_3533 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_570657.1 3922185 R 316057 CDS YP_570658.1 91977999 4024048 complement(3923295..3925175) 1 NC_007958.1 extracellular solute-binding protein 3925175 4024048 RPD_3534 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_570658.1 3923295 R 316057 CDS YP_570659.1 91978000 4024049 complement(3925190..3927085) 1 NC_007958.1 twin-arginine translocation pathway signal 3927085 4024049 RPD_3535 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_570659.1 3925190 R 316057 CDS YP_570660.1 91978001 4024050 complement(3927299..3927850) 1 NC_007958.1 cytochrome c, class I 3927850 4024050 RPD_3536 Rhodopseudomonas palustris BisB5 cytochrome c, class I YP_570660.1 3927299 R 316057 CDS YP_570661.1 91978002 4024051 3928064..3928801 1 NC_007958.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 3928801 4024051 RPD_3537 Rhodopseudomonas palustris BisB5 3-deoxy-manno-octulosonate cytidylyltransferase YP_570661.1 3928064 D 316057 CDS YP_570662.1 91978003 4024052 3928871..3929725 1 NC_007958.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 3929725 4024052 RPD_3538 Rhodopseudomonas palustris BisB5 prephenate dehydratase YP_570662.1 3928871 D 316057 CDS YP_570663.1 91978004 4024053 complement(3929938..3930954) 1 NC_007958.1 luciferase-like protein 3930954 4024053 RPD_3539 Rhodopseudomonas palustris BisB5 luciferase-like protein YP_570663.1 3929938 R 316057 CDS YP_570664.1 91978005 4024054 3931375..3932262 1 NC_007958.1 5,10-methylenetetrahydrofolate reductase 3932262 4024054 RPD_3540 Rhodopseudomonas palustris BisB5 5,10-methylenetetrahydrofolate reductase YP_570664.1 3931375 D 316057 CDS YP_570665.1 91978006 4024055 3932267..3936148 1 NC_007958.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 3936148 metH 4024055 metH Rhodopseudomonas palustris BisB5 B12-dependent methionine synthase YP_570665.1 3932267 D 316057 CDS YP_570666.1 91978007 4024056 3936319..3936708 1 NC_007958.1 hypothetical protein 3936708 4024056 RPD_3542 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570666.1 3936319 D 316057 CDS YP_570667.1 91978008 4024057 complement(3937190..3937783) 1 NC_007958.1 GCN5-like N-acetyltransferase 3937783 4024057 RPD_3543 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_570667.1 3937190 R 316057 CDS YP_570668.1 91978009 4024058 complement(3937805..3939307) 1 NC_007958.1 glycerol kinase 3939307 4024058 RPD_3544 Rhodopseudomonas palustris BisB5 glycerol kinase YP_570668.1 3937805 R 316057 CDS YP_570669.1 91978010 4024059 complement(3939652..3940362) 1 NC_007958.1 regulatory protein LuxR 3940362 4024059 RPD_3545 Rhodopseudomonas palustris BisB5 regulatory protein LuxR YP_570669.1 3939652 R 316057 CDS YP_570670.1 91978011 4024060 complement(3940531..3941583) 1 NC_007958.1 hypothetical protein 3941583 4024060 RPD_3546 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570670.1 3940531 R 316057 CDS YP_570671.1 91978012 4024061 3942075..3943775 1 NC_007958.1 chemotaxis sensory transducer 3943775 4024061 RPD_3547 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_570671.1 3942075 D 316057 CDS YP_570672.1 91978013 4024062 complement(3943975..3944748) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 3944748 4024062 RPD_3548 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570672.1 3943975 R 316057 CDS YP_570673.1 91978014 4024063 complement(3944928..3946070) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 3946070 4024063 RPD_3549 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570673.1 3944928 R 316057 CDS YP_570674.1 91978015 4024064 complement(3946263..3947453) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 3947453 4024064 RPD_3550 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570674.1 3946263 R 316057 CDS YP_570675.1 91978016 4024065 complement(3947606..3948793) 1 NC_007958.1 acetyl-CoA C-acyltransferase 3948793 4024065 RPD_3551 Rhodopseudomonas palustris BisB5 acetyl-CoA C-acyltransferase YP_570675.1 3947606 R 316057 CDS YP_570676.1 91978017 4024066 complement(3948818..3950470) 1 NC_007958.1 AMP-dependent synthetase and ligase 3950470 4024066 RPD_3552 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_570676.1 3948818 R 316057 CDS YP_570677.1 91978018 4024067 complement(3950655..3952754) 1 NC_007958.1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase 3952754 4024067 RPD_3553 Rhodopseudomonas palustris BisB5 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_570677.1 3950655 R 316057 CDS YP_570678.1 91978019 4024068 3952896..3953774 1 NC_007958.1 IclR family transcriptional regulator 3953774 4024068 RPD_3554 Rhodopseudomonas palustris BisB5 IclR family transcriptional regulator YP_570678.1 3952896 D 316057 CDS YP_570679.1 91978020 4024069 3953838..3954635 1 NC_007958.1 ABC transporter-like protein 3954635 4024069 RPD_3555 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570679.1 3953838 D 316057 CDS YP_570680.1 91978021 4024070 3954632..3955345 1 NC_007958.1 ABC transporter-like protein 3955345 4024070 RPD_3556 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570680.1 3954632 D 316057 CDS YP_570681.1 91978022 4024071 3955357..3956235 1 NC_007958.1 inner-membrane translocator 3956235 4024071 RPD_3557 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_570681.1 3955357 D 316057 CDS YP_570682.1 91978023 4024072 3956238..3957248 1 NC_007958.1 inner-membrane translocator 3957248 4024072 RPD_3558 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_570682.1 3956238 D 316057 CDS YP_570683.1 91978024 4024073 3957460..3958716 1 NC_007958.1 extracellular ligand-binding receptor 3958716 4024073 RPD_3559 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_570683.1 3957460 D 316057 CDS YP_570684.1 91978025 4024074 3958898..3960133 1 NC_007958.1 extracellular ligand-binding receptor 3960133 4024074 RPD_3560 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_570684.1 3958898 D 316057 CDS YP_570685.1 91978026 4024075 3960396..3961625 1 NC_007958.1 extracellular ligand-binding receptor 3961625 4024075 RPD_3561 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_570685.1 3960396 D 316057 CDS YP_570686.1 91978027 4024076 3961790..3963019 1 NC_007958.1 putative leucine/isoleucine/valine-binding protein 3963019 4024076 RPD_3562 Rhodopseudomonas palustris BisB5 putative leucine/isoleucine/valine-binding protein YP_570686.1 3961790 D 316057 CDS YP_570687.1 91978028 4024077 complement(3963140..3963640) 1 NC_007958.1 hypothetical protein 3963640 4024077 RPD_3563 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570687.1 3963140 R 316057 CDS YP_570688.1 91978029 4024078 3963828..3966002 1 NC_007958.1 carbohydrate-selective porin OprB 3966002 4024078 RPD_3564 Rhodopseudomonas palustris BisB5 carbohydrate-selective porin OprB YP_570688.1 3963828 D 316057 CDS YP_570689.1 91978030 4024079 complement(3966081..3967253) 1 NC_007958.1 peptidase M20D, amidohydrolase 3967253 4024079 RPD_3565 Rhodopseudomonas palustris BisB5 peptidase M20D, amidohydrolase YP_570689.1 3966081 R 316057 CDS YP_570690.1 91978031 4024080 3967408..3969027 1 NC_007958.1 glucose-methanol-choline oxidoreductase 3969027 4024080 RPD_3566 Rhodopseudomonas palustris BisB5 glucose-methanol-choline oxidoreductase YP_570690.1 3967408 D 316057 CDS YP_570691.1 91978032 4024081 complement(3969220..3970074) 1 NC_007958.1 hypothetical protein 3970074 4024081 RPD_3567 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570691.1 3969220 R 316057 CDS YP_570692.1 91978033 4024082 complement(3970217..3971608) 1 NC_007958.1 class III aminotransferase 3971608 4024082 RPD_3568 Rhodopseudomonas palustris BisB5 class III aminotransferase YP_570692.1 3970217 R 316057 CDS YP_570693.1 91978034 4024083 complement(3972036..3974642) 1 NC_007958.1 hypothetical protein 3974642 4024083 RPD_3569 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570693.1 3972036 R 316057 CDS YP_570694.1 91978035 4024084 3974943..3975887 1 NC_007958.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3975887 ispH 4024084 ispH Rhodopseudomonas palustris BisB5 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_570694.1 3974943 D 316057 CDS YP_570695.1 91978036 4024085 3975928..3977088 1 NC_007958.1 radical SAM family protein 3977088 4024085 RPD_3571 Rhodopseudomonas palustris BisB5 radical SAM family protein YP_570695.1 3975928 D 316057 CDS YP_570696.1 91978037 4024086 complement(3977017..3977757) 1 NC_007958.1 hypothetical protein 3977757 4024086 RPD_3572 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570696.1 3977017 R 316057 CDS YP_570697.1 91978038 4024087 complement(3977754..3979718) 1 NC_007958.1 squalene cyclase 3979718 4024087 RPD_3573 Rhodopseudomonas palustris BisB5 squalene cyclase YP_570697.1 3977754 R 316057 CDS YP_570698.1 91978039 4024088 complement(3979758..3981014) 1 NC_007958.1 amine oxidase 3981014 4024088 RPD_3574 Rhodopseudomonas palustris BisB5 amine oxidase YP_570698.1 3979758 R 316057 CDS YP_570699.1 91978040 4024089 complement(3981014..3981853) 1 NC_007958.1 squalene/phytoene synthase 3981853 4024089 RPD_3575 Rhodopseudomonas palustris BisB5 squalene/phytoene synthase YP_570699.1 3981014 R 316057 CDS YP_570700.1 91978041 4024090 complement(3981850..3982728) 1 NC_007958.1 squalene/phytoene synthase 3982728 4024090 RPD_3576 Rhodopseudomonas palustris BisB5 squalene/phytoene synthase YP_570700.1 3981850 R 316057 CDS YP_570701.1 91978042 4024091 complement(3982981..3983223) 1 NC_007958.1 hypothetical protein 3983223 4024091 RPD_3577 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570701.1 3982981 R 316057 CDS YP_570702.1 91978043 4024092 3983641..3984138 1 NC_007958.1 hypothetical protein 3984138 4024092 RPD_3578 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570702.1 3983641 D 316057 CDS YP_570703.1 91978044 4024093 complement(3984365..3986731) 1 NC_007958.1 RND superfamily transporter 3986731 4024093 RPD_3579 Rhodopseudomonas palustris BisB5 RND superfamily transporter YP_570703.1 3984365 R 316057 CDS YP_570704.1 91978045 4024094 complement(3987142..3988725) 1 NC_007958.1 radical SAM family protein 3988725 4024094 RPD_3580 Rhodopseudomonas palustris BisB5 radical SAM family protein YP_570704.1 3987142 R 316057 CDS YP_570705.1 91978046 4024095 complement(3989044..3990747) 1 NC_007958.1 methyl-accepting chemotaxis sensory transducer 3990747 4024095 RPD_3581 Rhodopseudomonas palustris BisB5 methyl-accepting chemotaxis sensory transducer YP_570705.1 3989044 R 316057 CDS YP_570706.1 91978047 4024096 complement(3990812..3991267) 1 NC_007958.1 hypothetical protein 3991267 4024096 RPD_3582 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570706.1 3990812 R 316057 CDS YP_570707.1 91978048 4024097 complement(3991491..3992369) 1 NC_007958.1 transglutaminase-like protein 3992369 4024097 RPD_3583 Rhodopseudomonas palustris BisB5 transglutaminase-like protein YP_570707.1 3991491 R 316057 CDS YP_570708.1 91978049 4024098 complement(3992366..3994867) 1 NC_007958.1 hypothetical protein 3994867 4024098 RPD_3584 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570708.1 3992366 R 316057 CDS YP_570709.1 91978050 4024099 complement(3994892..3998278) 1 NC_007958.1 transglutaminase-like protein 3998278 4024099 RPD_3585 Rhodopseudomonas palustris BisB5 transglutaminase-like protein YP_570709.1 3994892 R 316057 CDS YP_570710.1 91978051 4024100 complement(3998440..3999270) 1 NC_007958.1 HpcH/HpaI aldolase 3999270 4024100 RPD_3586 Rhodopseudomonas palustris BisB5 HpcH/HpaI aldolase YP_570710.1 3998440 R 316057 CDS YP_570711.1 91978052 4024101 complement(3999364..4000464) 1 NC_007958.1 malate/L-lactate dehydrogenase 4000464 4024101 RPD_3587 Rhodopseudomonas palustris BisB5 malate/L-lactate dehydrogenase YP_570711.1 3999364 R 316057 CDS YP_570712.1 91978053 4024102 complement(4000578..4001072) 1 NC_007958.1 homoprotocatechuate degradation transcriptional regulator HpaR 4001072 4024102 RPD_3588 Rhodopseudomonas palustris BisB5 homoprotocatechuate degradation transcriptional regulator HpaR YP_570712.1 4000578 R 316057 CDS YP_570713.1 91978054 4024103 4001289..4002095 1 NC_007958.1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 4002095 4024103 RPD_3589 Rhodopseudomonas palustris BisB5 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_570713.1 4001289 D 316057 CDS YP_570714.1 91978055 4024104 4002115..4002513 1 NC_007958.1 5-carboxymethyl-2-hydroxymuconate isomerase 4002513 4024104 RPD_3590 Rhodopseudomonas palustris BisB5 5-carboxymethyl-2-hydroxymuconate isomerase YP_570714.1 4002115 D 316057 CDS YP_570715.1 91978056 4024105 4002506..4004062 1 NC_007958.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4004062 4024105 RPD_3591 Rhodopseudomonas palustris BisB5 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_570715.1 4002506 D 316057 CDS YP_570716.1 91978057 4024106 4004229..4005206 1 NC_007958.1 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD 4005206 4024106 RPD_3592 Rhodopseudomonas palustris BisB5 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD YP_570716.1 4004229 D 316057 CDS YP_570717.1 91978058 4024107 4005364..4006239 1 NC_007958.1 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 4006239 4024107 RPD_3593 Rhodopseudomonas palustris BisB5 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_570717.1 4005364 D 316057 CDS YP_570718.1 91978059 4024108 4006270..4007895 1 NC_007958.1 hypothetical protein 4007895 4024108 RPD_3594 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570718.1 4006270 D 316057 CDS YP_570719.1 91978060 4024109 complement(4007919..4008572) 1 NC_007958.1 2OG-Fe(II) oxygenase 4008572 4024109 RPD_3595 Rhodopseudomonas palustris BisB5 2OG-Fe(II) oxygenase YP_570719.1 4007919 R 316057 CDS YP_570720.1 91978061 4024110 4008926..4009252 1 NC_007958.1 hypothetical protein 4009252 4024110 RPD_3596 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570720.1 4008926 D 316057 CDS YP_570721.1 91978062 4024111 complement(4009266..4009676) 1 NC_007958.1 hypothetical protein 4009676 4024111 RPD_3597 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570721.1 4009266 R 316057 CDS YP_570722.1 91978063 4024112 4009907..4010293 1 NC_007958.1 hypothetical protein 4010293 4024112 RPD_3598 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570722.1 4009907 D 316057 CDS YP_570723.1 91978064 4024113 complement(4010376..4010780) 1 NC_007958.1 hypothetical protein 4010780 4024113 RPD_3599 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570723.1 4010376 R 316057 CDS YP_570724.1 91978065 4024114 complement(4011106..4011972) 1 NC_007958.1 hypothetical protein 4011972 4024114 RPD_3600 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570724.1 4011106 R 316057 CDS YP_570725.1 91978066 4024115 complement(4012014..4012688) 1 NC_007958.1 cyclic nucleotide-binding protein 4012688 4024115 RPD_3601 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_570725.1 4012014 R 316057 CDS YP_570726.1 91978067 4024116 4013020..4013802 1 NC_007958.1 enoyl-CoA hydratase/isomerase 4013802 4024116 RPD_3602 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_570726.1 4013020 D 316057 CDS YP_570727.1 91978068 4024117 complement(4013828..4014526) 1 NC_007958.1 nitroreductase 4014526 4024117 RPD_3603 Rhodopseudomonas palustris BisB5 nitroreductase YP_570727.1 4013828 R 316057 CDS YP_570728.1 91978069 4024118 complement(4014693..4015937) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4015937 4024118 RPD_3604 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570728.1 4014693 R 316057 CDS YP_570729.1 91978070 4024119 complement(4016118..4017365) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4017365 4024119 RPD_3605 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570729.1 4016118 R 316057 CDS YP_570730.1 91978071 4024120 complement(4017376..4018503) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4018503 4024120 RPD_3606 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570730.1 4017376 R 316057 CDS YP_570731.1 91978072 4024121 complement(4018649..4020523) 1 NC_007958.1 acyl-CoA synthetase 4020523 4024121 RPD_3607 Rhodopseudomonas palustris BisB5 acyl-CoA synthetase YP_570731.1 4018649 R 316057 CDS YP_570732.1 91978073 4024122 complement(4020582..4021388) 1 NC_007958.1 enoyl-CoA hydratase/isomerase 4021388 4024122 RPD_3608 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_570732.1 4020582 R 316057 CDS YP_570733.1 91978074 4024123 complement(4021580..4022338) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 4022338 4024123 RPD_3609 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570733.1 4021580 R 316057 CDS YP_570734.1 91978075 4024124 complement(4022820..4023509) 1 NC_007958.1 TetR family transcriptional regulator 4023509 4024124 RPD_3610 Rhodopseudomonas palustris BisB5 TetR family transcriptional regulator YP_570734.1 4022820 R 316057 CDS YP_570735.1 91978076 4024125 4023640..4024815 1 NC_007958.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 4024815 4024125 RPD_3611 Rhodopseudomonas palustris BisB5 acetyl-CoA acetyltransferase YP_570735.1 4023640 D 316057 CDS YP_570736.1 91978077 4024126 4024975..4026519 1 NC_007958.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 4026519 4024126 RPD_3612 Rhodopseudomonas palustris BisB5 long-chain-fatty-acid--CoA ligase YP_570736.1 4024975 D 316057 CDS YP_570737.1 91978078 4024127 4026680..4027594 1 NC_007958.1 hypothetical protein 4027594 4024127 RPD_3613 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570737.1 4026680 D 316057 CDS YP_570738.1 91978079 4024128 complement(4027823..4028530) 1 NC_007958.1 putative outer membrane protein 4028530 4024128 RPD_3614 Rhodopseudomonas palustris BisB5 putative outer membrane protein YP_570738.1 4027823 R 316057 CDS YP_570739.1 91978080 4024129 complement(4028661..4030319) 1 NC_007958.1 hypothetical protein 4030319 4024129 RPD_3615 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570739.1 4028661 R 316057 CDS YP_570740.1 91978081 4024130 complement(4030424..4030711) 1 NC_007958.1 twin-arginine translocation pathway signal 4030711 4024130 RPD_3616 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_570740.1 4030424 R 316057 CDS YP_570741.1 91978082 4024131 complement(4031300..4033315) 1 NC_007958.1 autotransporter beta-domain-containing protein 4033315 4024131 RPD_3617 Rhodopseudomonas palustris BisB5 autotransporter beta-domain-containing protein YP_570741.1 4031300 R 316057 CDS YP_570742.1 91978083 4024132 complement(4033900..4035756) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4035756 4024132 RPD_3618 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570742.1 4033900 R 316057 CDS YP_570743.1 91978084 4024133 4035844..4036332 1 NC_007958.1 CinA-like protein 4036332 4024133 RPD_3619 Rhodopseudomonas palustris BisB5 CinA-like protein YP_570743.1 4035844 D 316057 CDS YP_570744.1 91978085 4024134 complement(4036339..4036713) 1 NC_007958.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 4036713 4024134 RPD_3620 Rhodopseudomonas palustris BisB5 camphor resistance protein CrcB YP_570744.1 4036339 R 316057 CDS YP_570745.1 91978086 4024135 complement(4036876..4037472) 1 NC_007958.1 superoxide dismutase 4037472 4024135 RPD_3621 Rhodopseudomonas palustris BisB5 superoxide dismutase YP_570745.1 4036876 R 316057 CDS YP_570746.1 91978087 4024136 complement(4037649..4038884) 1 NC_007958.1 major facilitator transporter 4038884 4024136 RPD_3622 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_570746.1 4037649 R 316057 CDS YP_570747.1 91978088 4024137 4039143..4040516 1 NC_007958.1 MATE efflux family protein 4040516 4024137 RPD_3623 Rhodopseudomonas palustris BisB5 MATE efflux family protein YP_570747.1 4039143 D 316057 CDS YP_570748.1 91978089 4024138 4040638..4041081 1 NC_007958.1 hypothetical protein 4041081 4024138 RPD_3624 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570748.1 4040638 D 316057 CDS YP_570749.1 91978090 4024139 complement(4041207..4042358) 1 NC_007958.1 hypothetical protein 4042358 4024139 RPD_3625 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570749.1 4041207 R 316057 CDS YP_570750.1 91978091 4024140 complement(4042436..4042579) 1 NC_007958.1 hypothetical protein 4042579 4024140 RPD_3626 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570750.1 4042436 R 316057 CDS YP_570751.1 91978092 4024141 4042795..4044018 1 NC_007958.1 metallophosphoesterase 4044018 4024141 RPD_3627 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_570751.1 4042795 D 316057 CDS YP_570752.1 91978093 4024142 4044015..4047470 1 NC_007958.1 hypothetical protein 4047470 4024142 RPD_3628 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570752.1 4044015 D 316057 CDS YP_570753.1 91978094 4024143 4048610..4049380 1 NC_007958.1 hypothetical protein 4049380 4024143 RPD_3629 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570753.1 4048610 D 316057 CDS YP_570754.1 91978095 4024144 4049364..4052885 1 NC_007958.1 DEAD/DEAH box helicase-like protein 4052885 4024144 RPD_3630 Rhodopseudomonas palustris BisB5 DEAD/DEAH box helicase-like protein YP_570754.1 4049364 D 316057 CDS YP_570755.1 91978096 4024145 complement(4052958..4054481) 1 NC_007958.1 hypothetical protein 4054481 4024145 RPD_3631 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570755.1 4052958 R 316057 CDS YP_570756.1 91978097 4024146 complement(4054478..4055923) 1 NC_007958.1 hypothetical protein 4055923 4024146 RPD_3632 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570756.1 4054478 R 316057 CDS YP_570757.1 91978098 4024147 4056261..4056668 1 NC_007958.1 hypothetical protein 4056668 4024147 RPD_3633 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570757.1 4056261 D 316057 CDS YP_570758.1 91978099 4024148 4056712..4057161 1 NC_007958.1 hypothetical protein 4057161 4024148 RPD_3634 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570758.1 4056712 D 316057 CDS YP_570759.1 91978100 4024149 4057164..4057889 1 NC_007958.1 hypothetical protein 4057889 4024149 RPD_3635 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570759.1 4057164 D 316057 CDS YP_570760.1 91978101 4024150 4058037..4059227 1 NC_007958.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 4059227 4024150 RPD_3636 Rhodopseudomonas palustris BisB5 DNA polymerase IV YP_570760.1 4058037 D 316057 CDS YP_570761.1 91978102 4024151 complement(4059446..4061440) 1 NC_007958.1 iron permease FTR1 4061440 4024151 RPD_3637 Rhodopseudomonas palustris BisB5 iron permease FTR1 YP_570761.1 4059446 R 316057 CDS YP_570762.1 91978103 4024152 complement(4061600..4062580) 1 NC_007958.1 bile acid:sodium symporter 4062580 4024152 RPD_3638 Rhodopseudomonas palustris BisB5 bile acid:sodium symporter YP_570762.1 4061600 R 316057 CDS YP_570763.1 91978104 4024153 4062666..4063058 1 NC_007958.1 regulatory protein ArsR 4063058 4024153 RPD_3639 Rhodopseudomonas palustris BisB5 regulatory protein ArsR YP_570763.1 4062666 D 316057 CDS YP_570764.1 91978105 4024154 complement(4063165..4063413) 1 NC_007958.1 putative silver efflux pump-like 4063413 4024154 RPD_3640 Rhodopseudomonas palustris BisB5 putative silver efflux pump-like YP_570764.1 4063165 R 316057 CDS YP_570765.1 91978106 4024155 complement(4063410..4063724) 1 NC_007958.1 putative silver efflux pump-like 4063724 4024155 RPD_3641 Rhodopseudomonas palustris BisB5 putative silver efflux pump-like YP_570765.1 4063410 R 316057 CDS YP_570766.1 91978107 4024156 complement(4063699..4064598) 1 NC_007958.1 cation diffusion facilitator family transporter 4064598 4024156 RPD_3642 Rhodopseudomonas palustris BisB5 cation diffusion facilitator family transporter YP_570766.1 4063699 R 316057 CDS YP_570767.1 91978108 4024157 complement(4064637..4066817) 1 NC_007958.1 heavy metal translocating P-type ATPase 4066817 4024157 RPD_3643 Rhodopseudomonas palustris BisB5 heavy metal translocating P-type ATPase YP_570767.1 4064637 R 316057 CDS YP_570768.1 91978109 4024158 complement(4066954..4068093) 1 NC_007958.1 hypothetical protein 4068093 4024158 RPD_3644 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570768.1 4066954 R 316057 CDS YP_570769.1 91978110 4024159 complement(4068142..4068510) 1 NC_007958.1 hypothetical protein 4068510 4024159 RPD_3645 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570769.1 4068142 R 316057 CDS YP_570770.1 91978111 4024160 complement(4068553..4071723) 1 NC_007958.1 heavy metal efflux pump CzcA 4071723 4024160 RPD_3646 Rhodopseudomonas palustris BisB5 heavy metal efflux pump CzcA YP_570770.1 4068553 R 316057 CDS YP_570771.1 91978112 4024161 complement(4071826..4072782) 1 NC_007958.1 secretion protein HlyD 4072782 4024161 RPD_3647 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_570771.1 4071826 R 316057 CDS YP_570772.1 91978113 4024162 complement(4072779..4074053) 1 NC_007958.1 outer membrane efflux protein 4074053 4024162 RPD_3648 Rhodopseudomonas palustris BisB5 outer membrane efflux protein YP_570772.1 4072779 R 316057 CDS YP_570773.1 91978114 4024163 complement(4074112..4074507) 1 NC_007958.1 hypothetical protein 4074507 4024163 RPD_3649 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570773.1 4074112 R 316057 CDS YP_570774.1 91978115 4024164 complement(4074626..4075597) 1 NC_007958.1 hypothetical protein 4075597 4024164 RPD_3650 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570774.1 4074626 R 316057 CDS YP_570775.1 91978116 4024165 complement(4076753..4076944) 1 NC_007958.1 hypothetical protein 4076944 4024165 RPD_3651 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570775.1 4076753 R 316057 CDS YP_570776.1 91978117 4024166 4077202..4077807 1 NC_007958.1 hypothetical protein 4077807 4024166 RPD_3652 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570776.1 4077202 D 316057 CDS YP_570777.1 91978118 4024167 4077817..4078356 1 NC_007958.1 hypothetical protein 4078356 4024167 RPD_3653 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570777.1 4077817 D 316057 CDS YP_570778.1 91978119 4024168 4078362..4079159 1 NC_007958.1 metallophosphoesterase 4079159 4024168 RPD_3654 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_570778.1 4078362 D 316057 CDS YP_570779.1 91978120 4024169 4079247..4079837 1 NC_007958.1 hypothetical protein 4079837 4024169 RPD_3655 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570779.1 4079247 D 316057 CDS YP_570780.1 91978121 4024170 4079834..4081918 1 NC_007958.1 AAA ATPase, central region 4081918 4024170 RPD_3656 Rhodopseudomonas palustris BisB5 AAA ATPase, central region YP_570780.1 4079834 D 316057 CDS YP_570781.1 91978122 4024171 4081934..4082200 1 NC_007958.1 hypothetical protein 4082200 4024171 RPD_3657 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570781.1 4081934 D 316057 CDS YP_570782.1 91978123 4024172 4082312..4083148 1 NC_007958.1 hypothetical protein 4083148 4024172 RPD_3658 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570782.1 4082312 D 316057 CDS YP_570783.1 91978124 4024173 4083145..4085502 1 NC_007958.1 integrase catalytic subunit 4085502 4024173 RPD_3659 Rhodopseudomonas palustris BisB5 integrase catalytic subunit YP_570783.1 4083145 D 316057 CDS YP_570784.1 91978125 4024174 4085511..4086500 1 NC_007958.1 hypothetical protein 4086500 4024174 RPD_3660 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570784.1 4085511 D 316057 CDS YP_570785.1 91978126 4024175 4086497..4088977 1 NC_007958.1 hypothetical protein 4088977 4024175 RPD_3661 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570785.1 4086497 D 316057 CDS YP_570786.1 91978127 4024176 complement(4088978..4089703) 1 NC_007958.1 hypothetical protein 4089703 4024176 RPD_3662 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570786.1 4088978 R 316057 CDS YP_570787.1 91978128 4024177 complement(4089859..4090125) 1 NC_007958.1 hypothetical protein 4090125 4024177 RPD_3663 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570787.1 4089859 R 316057 CDS YP_570788.1 91978129 4024178 4090348..4091076 1 NC_007958.1 hypothetical protein 4091076 4024178 RPD_3664 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570788.1 4090348 D 316057 CDS YP_570789.1 91978130 4024180 complement(4091510..4092757) 1 NC_007958.1 major facilitator transporter 4092757 4024180 RPD_3665 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_570789.1 4091510 R 316057 CDS YP_570790.1 91978131 4024181 4092920..4095154 1 NC_007958.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 4095154 flhA 4024181 flhA Rhodopseudomonas palustris BisB5 flagellar biosynthesis protein FlhA YP_570790.1 4092920 D 316057 CDS YP_570791.1 91978132 4024182 4095480..4095680 1 NC_007958.1 hypothetical protein 4095680 4024182 RPD_3667 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570791.1 4095480 D 316057 CDS YP_570792.1 91978133 4024183 complement(4095925..4096824) 1 NC_007958.1 hypothetical protein 4096824 4024183 RPD_3668 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570792.1 4095925 R 316057 CDS YP_570793.1 91978134 4024184 complement(4096824..4097372) 1 NC_007958.1 sigma-70 region 2 4097372 4024184 RPD_3669 Rhodopseudomonas palustris BisB5 sigma-70 region 2 YP_570793.1 4096824 R 316057 CDS YP_570794.1 91978135 4024185 complement(4097557..4097976) 1 NC_007958.1 flagellar export FliJ 4097976 4024185 RPD_3670 Rhodopseudomonas palustris BisB5 flagellar export FliJ YP_570794.1 4097557 R 316057 CDS YP_570795.1 91978136 4024186 complement(4098085..4099410) 1 NC_007958.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 4099410 fliI 4024186 fliI Rhodopseudomonas palustris BisB5 flagellum-specific ATP synthase YP_570795.1 4098085 R 316057 CDS YP_570796.1 91978137 4024187 4099780..4100481 1 NC_007958.1 winged helix family two component transcriptional regulator 4100481 4024187 RPD_3672 Rhodopseudomonas palustris BisB5 winged helix family two component transcriptional regulator YP_570796.1 4099780 D 316057 CDS YP_570797.1 91978138 4024189 complement(4100862..4101740) 1 NC_007958.1 protein-glutamate O-methyltransferase 4101740 4024189 RPD_3674 Rhodopseudomonas palustris BisB5 protein-glutamate O-methyltransferase YP_570797.1 4100862 R 316057 CDS YP_570798.1 91978139 4024190 complement(4101737..4102894) 1 NC_007958.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 4102894 4024190 RPD_3675 Rhodopseudomonas palustris BisB5 chemotaxis-specific methylesterase YP_570798.1 4101737 R 316057 CDS YP_570799.1 91978140 4024191 complement(4102967..4103332) 1 NC_007958.1 response regulator receiver 4103332 4024191 RPD_3676 Rhodopseudomonas palustris BisB5 response regulator receiver YP_570799.1 4102967 R 316057 CDS YP_570800.1 91978141 4024192 complement(4103388..4103858) 1 NC_007958.1 CheW-like protein 4103858 4024192 RPD_3677 Rhodopseudomonas palustris BisB5 CheW-like protein YP_570800.1 4103388 R 316057 CDS YP_570801.1 91978142 4024193 complement(4103882..4106659) 1 NC_007958.1 ATPase-like ATP-binding protein 4106659 4024193 RPD_3678 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_570801.1 4103882 R 316057 CDS YP_570802.1 91978143 4024194 complement(4106846..4107499) 1 NC_007958.1 hypothetical protein 4107499 4024194 RPD_3679 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570802.1 4106846 R 316057 CDS YP_570803.1 91978144 4024195 4107631..4108467 1 NC_007958.1 inositol monophosphatase 4108467 4024195 RPD_3680 Rhodopseudomonas palustris BisB5 inositol monophosphatase YP_570803.1 4107631 D 316057 CDS YP_570804.1 91978145 4024196 complement(4108469..4108975) 1 NC_007958.1 hypothetical protein 4108975 4024196 RPD_3681 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570804.1 4108469 R 316057 CDS YP_570805.1 91978146 4024197 4109088..4109684 1 NC_007958.1 hypothetical protein 4109684 4024197 RPD_3682 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570805.1 4109088 D 316057 CDS YP_570806.1 91978147 4024198 4109944..4111239 1 NC_007958.1 hypothetical protein 4111239 4024198 RPD_3683 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570806.1 4109944 D 316057 CDS YP_570807.1 91978148 4024200 complement(4111844..4113310) 1 NC_007958.1 hypothetical protein 4113310 4024200 RPD_3684 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570807.1 4111844 R 316057 CDS YP_570808.1 91978149 4024202 4113940..4114296 1 NC_007958.1 hypothetical protein 4114296 4024202 RPD_3686 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570808.1 4113940 D 316057 CDS YP_570809.1 91978150 4024203 complement(4114409..4114843) 1 NC_007958.1 hypothetical protein 4114843 4024203 RPD_3687 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570809.1 4114409 R 316057 CDS YP_570810.1 91978151 4024204 complement(4114949..4116496) 1 NC_007958.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 4116496 4024204 RPD_3688 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570810.1 4114949 R 316057 CDS YP_570811.1 91978152 4024205 4116676..4117257 1 NC_007958.1 hypothetical protein 4117257 4024205 RPD_3689 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570811.1 4116676 D 316057 CDS YP_570812.1 91978153 4024206 4117345..4118160 1 NC_007958.1 hypothetical protein 4118160 4024206 RPD_3690 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570812.1 4117345 D 316057 CDS YP_570813.1 91978154 4024207 complement(4118230..4119309) 1 NC_007958.1 peptidase M48, Ste24p 4119309 4024207 RPD_3691 Rhodopseudomonas palustris BisB5 peptidase M48, Ste24p YP_570813.1 4118230 R 316057 CDS YP_570814.1 91978155 4024208 complement(4119331..4120488) 1 NC_007958.1 hypothetical protein 4120488 4024208 RPD_3692 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570814.1 4119331 R 316057 CDS YP_570815.1 91978156 4024209 complement(4120788..4121960) 1 NC_007958.1 isovaleryl-CoA dehydrogenase 4121960 4024209 RPD_3693 Rhodopseudomonas palustris BisB5 isovaleryl-CoA dehydrogenase YP_570815.1 4120788 R 316057 CDS YP_570816.1 91978157 4024210 4122320..4123585 1 NC_007958.1 cytochrome P450 4123585 4024210 RPD_3694 Rhodopseudomonas palustris BisB5 cytochrome P450 YP_570816.1 4122320 D 316057 CDS YP_570817.1 91978158 4024211 4123617..4124792 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4124792 4024211 RPD_3695 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570817.1 4123617 D 316057 CDS YP_570818.1 91978159 4024212 4124964..4126058 1 NC_007958.1 L-carnitine dehydratase/bile acid-inducible protein F 4126058 4024212 RPD_3696 Rhodopseudomonas palustris BisB5 L-carnitine dehydratase/bile acid-inducible protein F YP_570818.1 4124964 D 316057 CDS YP_570819.1 91978160 4024213 4126073..4126948 1 NC_007958.1 hypothetical protein 4126948 4024213 RPD_3697 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570819.1 4126073 D 316057 CDS YP_570820.1 91978161 4024214 4126942..4127325 1 NC_007958.1 hypothetical protein 4127325 4024214 RPD_3698 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570820.1 4126942 D 316057 CDS YP_570821.1 91978162 4024215 4127365..4128987 1 NC_007958.1 catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase 4128987 4024215 RPD_3699 Rhodopseudomonas palustris BisB5 benzoylformate decarboxylase YP_570821.1 4127365 D 316057 CDS YP_570822.1 91978163 4024216 complement(4129174..4129977) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 4129977 4024216 RPD_3700 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570822.1 4129174 R 316057 CDS YP_570823.1 91978164 4024217 complement(4130098..4130796) 1 NC_007958.1 Hly-III-like proteins 4130796 4024217 RPD_3701 Rhodopseudomonas palustris BisB5 Hly-III-like proteins YP_570823.1 4130098 R 316057 CDS YP_570824.1 91978165 4024218 4131022..4132491 1 NC_007958.1 hypothetical protein 4132491 4024218 RPD_3702 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570824.1 4131022 D 316057 CDS YP_570825.1 91978166 4024219 4132488..4133582 1 NC_007958.1 hypothetical protein 4133582 4024219 RPD_3703 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570825.1 4132488 D 316057 CDS YP_570826.1 91978167 4024220 4133783..4135561 1 NC_007958.1 ferredoxin 4135561 4024220 RPD_3704 Rhodopseudomonas palustris BisB5 ferredoxin YP_570826.1 4133783 D 316057 CDS YP_570827.1 91978168 4024221 4135730..4135972 1 NC_007958.1 hypothetical protein 4135972 4024221 RPD_3705 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570827.1 4135730 D 316057 CDS YP_570828.1 91978169 4024222 complement(4136051..4136701) 1 NC_007958.1 hypothetical protein 4136701 4024222 RPD_3706 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570828.1 4136051 R 316057 CDS YP_570829.1 91978170 4024223 4136854..4139862 1 NC_007958.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 4139862 4024223 RPD_3707 Rhodopseudomonas palustris BisB5 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_570829.1 4136854 D 316057 CDS YP_570830.1 91978171 4024224 4139967..4141232 1 NC_007958.1 L-carnitine dehydratase/bile acid-inducible protein F 4141232 4024224 RPD_3708 Rhodopseudomonas palustris BisB5 L-carnitine dehydratase/bile acid-inducible protein F YP_570830.1 4139967 D 316057 CDS YP_570831.1 91978172 4024225 complement(4141278..4142780) 1 NC_007958.1 hypothetical protein 4142780 4024225 RPD_3709 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570831.1 4141278 R 316057 CDS YP_570832.1 91978173 4024226 complement(4142895..4143866) 1 NC_007958.1 hypothetical protein 4143866 4024226 RPD_3710 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570832.1 4142895 R 316057 CDS YP_570833.1 91978174 4024227 4144067..4144678 1 NC_007958.1 glutathione S-transferase-like protein 4144678 4024227 RPD_3711 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_570833.1 4144067 D 316057 CDS YP_570834.1 91978175 4024228 complement(4144800..4145297) 1 NC_007958.1 hypothetical protein 4145297 4024228 RPD_3712 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570834.1 4144800 R 316057 CDS YP_570835.1 91978176 4024229 complement(4145311..4146216) 1 NC_007958.1 hypothetical protein 4146216 4024229 RPD_3713 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570835.1 4145311 R 316057 CDS YP_570836.1 91978177 4024230 complement(4146241..4146855) 1 NC_007958.1 hypothetical protein 4146855 4024230 RPD_3714 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570836.1 4146241 R 316057 CDS YP_570837.1 91978178 4024231 complement(4146931..4149261) 1 NC_007958.1 carbon-monoxide dehydrogenase 4149261 4024231 RPD_3715 Rhodopseudomonas palustris BisB5 carbon-monoxide dehydrogenase YP_570837.1 4146931 R 316057 CDS YP_570838.1 91978179 4024232 complement(4149450..4150325) 1 NC_007958.1 dihydrodipicolinate synthetase 4150325 4024232 RPD_3716 Rhodopseudomonas palustris BisB5 dihydrodipicolinate synthetase YP_570838.1 4149450 R 316057 CDS YP_570839.1 91978180 4024233 4150436..4152577 1 NC_007958.1 oligopeptidase B 4152577 4024233 RPD_3717 Rhodopseudomonas palustris BisB5 oligopeptidase B YP_570839.1 4150436 D 316057 CDS YP_570840.1 91978181 4024234 4152701..4153996 1 NC_007958.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 4153996 4024234 RPD_3718 Rhodopseudomonas palustris BisB5 O-acetylhomoserine aminocarboxypropyltransferase YP_570840.1 4152701 D 316057 CDS YP_570841.1 91978182 4024235 4154000..4154782 1 NC_007958.1 alpha/beta hydrolase fold protein 4154782 4024235 RPD_3719 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_570841.1 4154000 D 316057 CDS YP_570842.1 91978183 4024236 complement(4154939..4155862) 1 NC_007958.1 AAA ATPase, central region 4155862 4024236 RPD_3720 Rhodopseudomonas palustris BisB5 AAA ATPase, central region YP_570842.1 4154939 R 316057 CDS YP_570843.1 91978184 4024237 complement(4155865..4156290) 1 NC_007958.1 ribulose-bisphosphate carboxylase 4156290 4024237 RPD_3721 Rhodopseudomonas palustris BisB5 ribulose-bisphosphate carboxylase YP_570843.1 4155865 R 316057 CDS YP_570844.1 91978185 4024238 complement(4156303..4157760) 1 NC_007958.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 4157760 rbcL 4024238 rbcL Rhodopseudomonas palustris BisB5 ribulose bisophosphate carboxylase YP_570844.1 4156303 R 316057 CDS YP_570845.1 91978186 4024239 4157932..4158900 1 NC_007958.1 LysR family transcriptional regulator 4158900 4024239 RPD_3723 Rhodopseudomonas palustris BisB5 LysR family transcriptional regulator YP_570845.1 4157932 D 316057 CDS YP_570846.1 91978187 4024240 complement(4159005..4160216) 1 NC_007958.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 4160216 4024240 RPD_3724 Rhodopseudomonas palustris BisB5 5-aminolevulinate synthase YP_570846.1 4159005 R 316057 CDS YP_570847.1 91978188 4024241 complement(4160213..4161298) 1 NC_007958.1 hypothetical protein 4161298 4024241 RPD_3725 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570847.1 4160213 R 316057 CDS YP_570848.1 91978189 4024242 complement(4161312..4162415) 1 NC_007958.1 oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase 4162415 4024242 RPD_3726 Rhodopseudomonas palustris BisB5 magnesium-protoporphyrin IX monomethyl ester cyclase YP_570848.1 4161312 R 316057 CDS YP_570849.1 91978190 4024243 complement(4162412..4162717) 1 NC_007958.1 hypothetical protein 4162717 4024243 RPD_3727 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570849.1 4162412 R 316057 CDS YP_570850.1 91978191 4024244 complement(4162714..4163205) 1 NC_007958.1 putative photosynthetic complex assembly protein 4163205 4024244 RPD_3728 Rhodopseudomonas palustris BisB5 putative photosynthetic complex assembly protein YP_570850.1 4162714 R 316057 CDS YP_570851.1 91978192 4024245 complement(4163219..4163881) 1 NC_007958.1 putative photosynthetic complex assembly protein 4163881 4024245 RPD_3729 Rhodopseudomonas palustris BisB5 putative photosynthetic complex assembly protein YP_570851.1 4163219 R 316057 CDS YP_570852.1 91978193 4024246 complement(4163878..4164642) 1 NC_007958.1 photosynthetic reaction center subunit H 4164642 4024246 RPD_3730 Rhodopseudomonas palustris BisB5 photosynthetic reaction center subunit H YP_570852.1 4163878 R 316057 CDS YP_570853.1 91978194 4024247 complement(4164665..4166098) 1 NC_007958.1 PUCC protein 4166098 4024247 RPD_3731 Rhodopseudomonas palustris BisB5 PUCC protein YP_570853.1 4164665 R 316057 CDS YP_570854.1 91978195 4024248 complement(4166095..4166796) 1 NC_007958.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase 4166796 4024248 RPD_3732 Rhodopseudomonas palustris BisB5 Mg-protoporphyrin IX methyl transferase YP_570854.1 4166095 R 316057 CDS YP_570855.1 91978196 4024249 complement(4166796..4167734) 1 NC_007958.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein 4167734 chlL 4024249 chlL Rhodopseudomonas palustris BisB5 protochlorophyllide reductase iron-sulfur ATP-binding protein YP_570855.1 4166796 R 316057 CDS YP_570856.1 91978197 4024250 complement(4167731..4171477) 1 NC_007958.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit H 4171477 bchH 4024250 bchH Rhodopseudomonas palustris BisB5 magnesium chelatase subunit H YP_570856.1 4167731 R 316057 CDS YP_570857.1 91978198 4024251 complement(4171452..4173059) 1 NC_007958.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B 4173059 4024251 RPD_3735 Rhodopseudomonas palustris BisB5 light-independent protochlorophyllide reductase subunit B YP_570857.1 4171452 R 316057 CDS YP_570858.1 91978199 4024252 complement(4173062..4174348) 1 NC_007958.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N 4174348 4024252 RPD_3736 Rhodopseudomonas palustris BisB5 light-independent protochlorophyllide reductase subunit N YP_570858.1 4173062 R 316057 CDS YP_570859.1 91978200 4024253 complement(4174345..4175034) 1 NC_007958.1 2-vinyl bacteriochlorophyllide hydratase 4175034 4024253 RPD_3737 Rhodopseudomonas palustris BisB5 2-vinyl bacteriochlorophyllide hydratase YP_570859.1 4174345 R 316057 CDS YP_570860.1 91978201 4024254 4175168..4176055 1 NC_007958.1 cobalamin B12-binding 4176055 4024254 RPD_3738 Rhodopseudomonas palustris BisB5 cobalamin B12-binding YP_570860.1 4175168 D 316057 CDS YP_570861.1 91978202 4024255 4176124..4176807 1 NC_007958.1 Heme oxygenase 4176807 4024255 RPD_3739 Rhodopseudomonas palustris BisB5 Heme oxygenase YP_570861.1 4176124 D 316057 CDS YP_570862.1 91978203 4024256 complement(4176909..4179107) 1 NC_007958.1 phytochrome 4179107 4024256 RPD_3740 Rhodopseudomonas palustris BisB5 phytochrome YP_570862.1 4176909 R 316057 CDS YP_570863.1 91978204 4024257 complement(4179109..4180431) 1 NC_007958.1 transcriptional regulator PpsR 4180431 4024257 RPD_3741 Rhodopseudomonas palustris BisB5 transcriptional regulator PpsR YP_570863.1 4179109 R 316057 CDS YP_570864.1 91978205 4024258 4180792..4181211 1 NC_007958.1 cytochrome c, class I 4181211 4024258 RPD_3742 Rhodopseudomonas palustris BisB5 cytochrome c, class I YP_570864.1 4180792 D 316057 CDS YP_570865.1 91978206 4024259 complement(4181337..4181612) 1 NC_007958.1 hypothetical protein 4181612 4024259 RPD_3743 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570865.1 4181337 R 316057 CDS YP_570866.1 91978207 4024260 complement(4181654..4182121) 1 NC_007958.1 TspO/MBR family protein 4182121 4024260 RPD_3744 Rhodopseudomonas palustris BisB5 TspO/MBR family protein YP_570866.1 4181654 R 316057 CDS YP_570867.1 91978208 4024261 complement(4182138..4183340) 1 NC_007958.1 geranylgeranyl reductase 4183340 4024261 RPD_3745 Rhodopseudomonas palustris BisB5 geranylgeranyl reductase YP_570867.1 4182138 R 316057 CDS YP_570868.1 91978209 4024262 complement(4183342..4184685) 1 NC_007958.1 PUCC protein 4184685 4024262 RPD_3746 Rhodopseudomonas palustris BisB5 PUCC protein YP_570868.1 4183342 R 316057 CDS YP_570869.1 91978210 4024263 complement(4184688..4185581) 1 NC_007958.1 bacteriochlorophyll/chlorophyll a synthase 4185581 4024263 RPD_3747 Rhodopseudomonas palustris BisB5 bacteriochlorophyll/chlorophyll a synthase YP_570869.1 4184688 R 316057 CDS YP_570870.1 91978211 4024264 complement(4185574..4187007) 1 NC_007958.1 transcriptional regulator PpsR 4187007 4024264 RPD_3748 Rhodopseudomonas palustris BisB5 transcriptional regulator PpsR YP_570870.1 4185574 R 316057 CDS YP_570871.1 91978212 4024265 complement(4187331..4188254) 1 NC_007958.1 photosynthetic reaction center subunit M 4188254 4024265 RPD_3749 Rhodopseudomonas palustris BisB5 photosynthetic reaction center subunit M YP_570871.1 4187331 R 316057 CDS YP_570872.1 91978213 4024266 complement(4188282..4189115) 1 NC_007958.1 photosynthetic reaction center subunit L 4189115 4024266 RPD_3750 Rhodopseudomonas palustris BisB5 photosynthetic reaction center subunit L YP_570872.1 4188282 R 316057 CDS YP_570873.1 91978214 4024267 complement(4189248..4189427) 1 NC_007958.1 antenna complex subunit alpha/beta 4189427 4024267 RPD_3751 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_570873.1 4189248 R 316057 CDS YP_570874.1 91978215 4024268 complement(4189440..4189652) 1 NC_007958.1 antenna complex subunit alpha/beta 4189652 4024268 RPD_3752 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_570874.1 4189440 R 316057 CDS YP_570875.1 91978216 4024269 complement(4189796..4190020) 1 NC_007958.1 hypothetical protein 4190020 4024269 RPD_3753 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570875.1 4189796 R 316057 CDS YP_570876.1 91978217 4024270 complement(4190097..4191548) 1 NC_007958.1 chlorophyllide reductase subunit Z 4191548 4024270 RPD_3754 Rhodopseudomonas palustris BisB5 chlorophyllide reductase subunit Z YP_570876.1 4190097 R 316057 CDS YP_570877.1 91978218 4024271 complement(4191548..4193170) 1 NC_007958.1 chlorophyllide reductase subunit Y 4193170 4024271 RPD_3755 Rhodopseudomonas palustris BisB5 chlorophyllide reductase subunit Y YP_570877.1 4191548 R 316057 CDS YP_570878.1 91978219 4024272 complement(4193196..4194194) 1 NC_007958.1 chlorophyllide reductase iron protein subunit X 4194194 4024272 RPD_3756 Rhodopseudomonas palustris BisB5 chlorophyllide reductase iron protein subunit X YP_570878.1 4193196 R 316057 CDS YP_570879.1 91978220 4024273 complement(4194194..4195132) 1 NC_007958.1 chlorophyll synthesis pathway protein BchC 4195132 4024273 RPD_3757 Rhodopseudomonas palustris BisB5 chlorophyll synthesis pathway protein BchC YP_570879.1 4194194 R 316057 CDS YP_570880.1 91978221 4024274 complement(4195201..4196343) 1 NC_007958.1 O-methyltransferase family protein 4196343 4024274 RPD_3758 Rhodopseudomonas palustris BisB5 O-methyltransferase family protein YP_570880.1 4195201 R 316057 CDS YP_570881.1 91978222 4024275 complement(4196484..4197350) 1 NC_007958.1 polyprenyl synthetase 4197350 4024275 RPD_3759 Rhodopseudomonas palustris BisB5 polyprenyl synthetase YP_570881.1 4196484 R 316057 CDS YP_570882.1 91978223 4024276 4197472..4199046 1 NC_007958.1 FAD dependent oxidoreductase 4199046 4024276 RPD_3760 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_570882.1 4197472 D 316057 CDS YP_570883.1 91978224 4024277 4199053..4200006 1 NC_007958.1 hydroxyneurosporene synthase 4200006 4024277 RPD_3761 Rhodopseudomonas palustris BisB5 hydroxyneurosporene synthase YP_570883.1 4199053 D 316057 CDS YP_570884.1 91978225 4024278 complement(4200062..4200214) 1 NC_007958.1 hypothetical protein 4200214 4024278 RPD_3762 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570884.1 4200062 R 316057 CDS YP_570885.1 91978226 4024279 complement(4200211..4200345) 1 NC_007958.1 hypothetical protein 4200345 4024279 RPD_3763 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570885.1 4200211 R 316057 CDS YP_570886.1 91978227 4024280 complement(4200367..4201299) 1 NC_007958.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 4201299 4024280 RPD_3764 Rhodopseudomonas palustris BisB5 coproporphyrinogen III oxidase YP_570886.1 4200367 R 316057 CDS YP_570887.1 91978228 4024281 complement(4201498..4202547) 1 NC_007958.1 squalene/phytoene synthase 4202547 4024281 RPD_3765 Rhodopseudomonas palustris BisB5 squalene/phytoene synthase YP_570887.1 4201498 R 316057 CDS YP_570888.1 91978229 4024282 complement(4202544..4204079) 1 NC_007958.1 amine oxidase 4204079 4024282 RPD_3766 Rhodopseudomonas palustris BisB5 amine oxidase YP_570888.1 4202544 R 316057 CDS YP_570889.1 91978230 4024283 complement(4204157..4205047) 1 NC_007958.1 alpha/beta hydrolase fold protein 4205047 4024283 RPD_3767 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_570889.1 4204157 R 316057 CDS YP_570890.1 91978231 4024284 complement(4205058..4206011) 1 NC_007958.1 alpha/beta hydrolase fold protein 4206011 4024284 RPD_3768 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_570890.1 4205058 R 316057 CDS YP_570891.1 91978232 4024285 4206123..4207169 1 NC_007958.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 4207169 hemE 4024285 hemE Rhodopseudomonas palustris BisB5 uroporphyrinogen decarboxylase YP_570891.1 4206123 D 316057 CDS YP_570892.1 91978233 4024286 complement(4207334..4209100) 1 NC_007958.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit D 4209100 bchD 4024286 bchD Rhodopseudomonas palustris BisB5 magnesium chelatase subunit D YP_570892.1 4207334 R 316057 CDS YP_570893.1 91978234 4024287 complement(4209097..4210119) 1 NC_007958.1 magnesium chelatase ATPase subunit I 4210119 4024287 RPD_3771 Rhodopseudomonas palustris BisB5 magnesium chelatase ATPase subunit I YP_570893.1 4209097 R 316057 CDS YP_570894.1 91978235 4024288 complement(4210128..4211120) 1 NC_007958.1 porphobilinogen deaminase 4211120 4024288 RPD_3772 Rhodopseudomonas palustris BisB5 porphobilinogen deaminase YP_570894.1 4210128 R 316057 CDS YP_570895.1 91978236 4024289 4211369..4212682 1 NC_007958.1 hypothetical protein 4212682 4024289 RPD_3773 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570895.1 4211369 D 316057 CDS YP_570896.1 91978237 4024290 4212682..4214283 1 NC_007958.1 hypothetical protein 4214283 4024290 RPD_3774 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570896.1 4212682 D 316057 CDS YP_570897.1 91978238 4024291 4214283..4214771 1 NC_007958.1 hypothetical protein 4214771 4024291 RPD_3775 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570897.1 4214283 D 316057 CDS YP_570898.1 91978239 4024292 4214835..4215332 1 NC_007958.1 hypothetical protein 4215332 4024292 RPD_3776 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570898.1 4214835 D 316057 CDS YP_570899.1 91978240 4024293 4215326..4216558 1 NC_007958.1 coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein 4216558 4024293 RPD_3777 Rhodopseudomonas palustris BisB5 coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein YP_570899.1 4215326 D 316057 CDS YP_570900.1 91978241 4024294 4216665..4217129 1 NC_007958.1 hypothetical protein 4217129 4024294 RPD_3778 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570900.1 4216665 D 316057 CDS YP_570901.1 91978242 4024295 complement(4217206..4217643) 1 NC_007958.1 hypothetical protein 4217643 4024295 RPD_3779 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570901.1 4217206 R 316057 CDS YP_570902.1 91978243 4024296 complement(4217749..4220913) 1 NC_007958.1 hydrophobe/amphiphile efflux-1 HAE1 4220913 4024296 RPD_3780 Rhodopseudomonas palustris BisB5 hydrophobe/amphiphile efflux-1 HAE1 YP_570902.1 4217749 R 316057 CDS YP_570903.1 91978244 4024297 complement(4220922..4222118) 1 NC_007958.1 secretion protein HlyD 4222118 4024297 RPD_3781 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_570903.1 4220922 R 316057 CDS YP_570904.1 91978245 4024298 complement(4222451..4223995) 1 NC_007958.1 putative monooxygenase 4223995 4024298 RPD_3782 Rhodopseudomonas palustris BisB5 putative monooxygenase YP_570904.1 4222451 R 316057 CDS YP_570905.1 91978246 4024299 complement(4224233..4224523) 1 NC_007958.1 hypothetical protein 4224523 4024299 RPD_3783 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570905.1 4224233 R 316057 CDS YP_570906.1 91978247 4024300 complement(4224535..4225197) 1 NC_007958.1 hypothetical protein 4225197 4024300 RPD_3784 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570906.1 4224535 R 316057 CDS YP_570907.1 91978248 4024301 complement(4225216..4226643) 1 NC_007958.1 PUCC protein 4226643 4024301 RPD_3785 Rhodopseudomonas palustris BisB5 PUCC protein YP_570907.1 4225216 R 316057 CDS YP_570908.1 91978249 4024302 complement(4226832..4227011) 1 NC_007958.1 antenna complex subunit alpha/beta 4227011 4024302 RPD_3786 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_570908.1 4226832 R 316057 CDS YP_570909.1 91978250 4024303 complement(4227024..4227179) 1 NC_007958.1 antenna complex subunit alpha/beta 4227179 4024303 RPD_3787 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_570909.1 4227024 R 316057 CDS YP_570910.1 91978251 4024304 4227536..4229854 1 NC_007958.1 phytochrome 4229854 4024304 RPD_3788 Rhodopseudomonas palustris BisB5 phytochrome YP_570910.1 4227536 D 316057 CDS YP_570911.1 91978252 4024305 4229858..4230544 1 NC_007958.1 response regulator receiver 4230544 4024305 RPD_3789 Rhodopseudomonas palustris BisB5 response regulator receiver YP_570911.1 4229858 D 316057 CDS YP_570912.1 91978253 4024306 complement(4230685..4230933) 1 NC_007958.1 hypothetical protein 4230933 4024306 RPD_3790 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570912.1 4230685 R 316057 CDS YP_570913.1 91978254 4024307 complement(4230972..4232201) 1 NC_007958.1 NnrS 4232201 4024307 RPD_3791 Rhodopseudomonas palustris BisB5 NnrS YP_570913.1 4230972 R 316057 CDS YP_570914.1 91978255 4024308 complement(4232329..4233021) 1 NC_007958.1 NnrU 4233021 4024308 RPD_3792 Rhodopseudomonas palustris BisB5 NnrU YP_570914.1 4232329 R 316057 CDS YP_570915.1 91978256 4024309 complement(4233210..4234862) 1 NC_007958.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 4234862 4024309 RPD_3793 Rhodopseudomonas palustris BisB5 phosphoglucomutase YP_570915.1 4233210 R 316057 CDS YP_570916.1 91978257 4024310 4235125..4236360 1 NC_007958.1 FAD dependent oxidoreductase 4236360 4024310 RPD_3794 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_570916.1 4235125 D 316057 CDS YP_570917.1 91978258 4024311 complement(4236368..4237201) 1 NC_007958.1 hypothetical protein 4237201 4024311 RPD_3795 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570917.1 4236368 R 316057 CDS YP_570918.1 91978259 4024312 complement(4237352..4237726) 1 NC_007958.1 response regulator receiver 4237726 4024312 RPD_3796 Rhodopseudomonas palustris BisB5 response regulator receiver YP_570918.1 4237352 R 316057 CDS YP_570919.1 91978260 4024313 complement(4237857..4238693) 1 NC_007958.1 metallophosphoesterase 4238693 4024313 RPD_3797 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_570919.1 4237857 R 316057 CDS YP_570920.1 91978261 4024314 complement(4238714..4238971) 1 NC_007958.1 putative transport system ATP-binding protein 4238971 4024314 RPD_3798 Rhodopseudomonas palustris BisB5 putative transport system ATP-binding protein YP_570920.1 4238714 R 316057 CDS YP_570921.1 91978262 4024315 4239355..4239624 1 NC_007958.1 hypothetical protein 4239624 4024315 RPD_3799 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570921.1 4239355 D 316057 CDS YP_570922.1 91978263 4024316 4239893..4240360 1 NC_007958.1 hypothetical protein 4240360 4024316 RPD_3800 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570922.1 4239893 D 316057 CDS YP_570923.1 91978264 4024317 4240707..4241420 1 NC_007958.1 GntR-like protein 4241420 4024317 RPD_3801 Rhodopseudomonas palustris BisB5 GntR-like protein YP_570923.1 4240707 D 316057 CDS YP_570924.1 91978265 4024318 4241433..4243232 1 NC_007958.1 catalyzes the hydrolysis of allophanate; allophanate hydrolase 4243232 4024318 RPD_3802 Rhodopseudomonas palustris BisB5 allophanate hydrolase YP_570924.1 4241433 D 316057 CDS YP_570925.1 91978266 4024319 4243434..4244237 1 NC_007958.1 peptidase C26 4244237 4024319 RPD_3803 Rhodopseudomonas palustris BisB5 peptidase C26 YP_570925.1 4243434 D 316057 CDS YP_570926.1 91978267 4024320 complement(4244391..4246250) 1 NC_007958.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 4246250 4024320 RPD_3804 Rhodopseudomonas palustris BisB5 dihydroxy-acid dehydratase YP_570926.1 4244391 R 316057 CDS YP_570927.1 91978268 4024321 complement(4246588..4247379) 1 NC_007958.1 cyclic nucleotide-binding protein 4247379 4024321 RPD_3805 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_570927.1 4246588 R 316057 CDS YP_570928.1 91978269 4024322 4247418..4247723 1 NC_007958.1 hypothetical protein 4247723 4024322 RPD_3806 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570928.1 4247418 D 316057 CDS YP_570929.1 91978270 4024323 complement(4247765..4248229) 1 NC_007958.1 hypothetical protein 4248229 4024323 RPD_3807 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570929.1 4247765 R 316057 CDS YP_570930.1 91978271 4024324 4248464..4249990 1 NC_007958.1 AMP-dependent synthetase and ligase 4249990 4024324 RPD_3808 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_570930.1 4248464 D 316057 CDS YP_570931.1 91978272 4024325 complement(4250100..4250876) 1 NC_007958.1 enoyl-CoA hydratase/isomerase 4250876 4024325 RPD_3809 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_570931.1 4250100 R 316057 CDS YP_570932.1 91978273 4024326 complement(4250921..4252066) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4252066 4024326 RPD_3810 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_570932.1 4250921 R 316057 CDS YP_570933.1 91978274 4024327 complement(4252077..4252904) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 4252904 4024327 RPD_3811 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_570933.1 4252077 R 316057 CDS YP_570934.1 91978275 4024328 complement(4252932..4253354) 1 NC_007958.1 MaoC-like dehydratase 4253354 4024328 RPD_3812 Rhodopseudomonas palustris BisB5 MaoC-like dehydratase YP_570934.1 4252932 R 316057 CDS YP_570935.1 91978276 4024329 complement(4253351..4253797) 1 NC_007958.1 hypothetical protein 4253797 4024329 RPD_3813 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570935.1 4253351 R 316057 CDS YP_570936.1 91978277 4024330 complement(4253808..4254992) 1 NC_007958.1 lipid-transfer protein 4254992 4024330 RPD_3814 Rhodopseudomonas palustris BisB5 lipid-transfer protein YP_570936.1 4253808 R 316057 CDS YP_570937.1 91978278 4024331 4255032..4255790 1 NC_007958.1 regulatory protein TetR 4255790 4024331 RPD_3815 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_570937.1 4255032 D 316057 CDS YP_570938.1 91978279 4024332 4255787..4257343 1 NC_007958.1 AMP-dependent synthetase and ligase 4257343 4024332 RPD_3816 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_570938.1 4255787 D 316057 CDS YP_570939.1 91978280 4024333 complement(4257364..4258068) 1 NC_007958.1 hypothetical protein 4258068 4024333 RPD_3817 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570939.1 4257364 R 316057 CDS YP_570940.1 91978281 4024334 complement(4258090..4259283) 1 NC_007958.1 phosphonate metabolism PhnM 4259283 4024334 RPD_3818 Rhodopseudomonas palustris BisB5 phosphonate metabolism PhnM YP_570940.1 4258090 R 316057 CDS YP_570941.1 91978282 4024335 complement(4259280..4260056) 1 NC_007958.1 putative acetyltransferase 4260056 4024335 RPD_3819 Rhodopseudomonas palustris BisB5 putative acetyltransferase YP_570941.1 4259280 R 316057 CDS YP_570942.1 91978283 4024336 4260113..4260925 1 NC_007958.1 phosphonate ABC transporter ATP-binding protein 4260925 4024336 RPD_3820 Rhodopseudomonas palustris BisB5 phosphonate ABC transporter ATP-binding protein YP_570942.1 4260113 D 316057 CDS YP_570943.1 91978284 4024337 4261010..4261951 1 NC_007958.1 phosphonate-binding periplasmic protein 4261951 4024337 RPD_3821 Rhodopseudomonas palustris BisB5 phosphonate-binding periplasmic protein YP_570943.1 4261010 D 316057 CDS YP_570944.1 91978285 4024338 4262001..4262903 1 NC_007958.1 phosphonate ABC transporter permease 4262903 4024338 RPD_3822 Rhodopseudomonas palustris BisB5 phosphonate ABC transporter permease YP_570944.1 4262001 D 316057 CDS YP_570945.1 91978286 4024339 4262900..4263748 1 NC_007958.1 phosphonate ABC transporter permease 4263748 4024339 RPD_3823 Rhodopseudomonas palustris BisB5 phosphonate ABC transporter permease YP_570945.1 4262900 D 316057 CDS YP_570946.1 91978287 4024340 complement(4263760..4264488) 1 NC_007958.1 GntR family transcriptional regulator 4264488 4024340 RPD_3824 Rhodopseudomonas palustris BisB5 GntR family transcriptional regulator YP_570946.1 4263760 R 316057 CDS YP_570947.1 91978288 4024341 4264565..4265068 1 NC_007958.1 phosphonate metabolism PhnG 4265068 4024341 RPD_3825 Rhodopseudomonas palustris BisB5 phosphonate metabolism PhnG YP_570947.1 4264565 D 316057 CDS YP_570948.1 91978289 4024342 4265071..4265679 1 NC_007958.1 carbon-phosphorus lyase complex subunit 4265679 phnH 4024342 phnH Rhodopseudomonas palustris BisB5 carbon-phosphorus lyase complex subunit YP_570948.1 4265071 D 316057 CDS YP_570949.1 91978290 4024343 4265679..4266785 1 NC_007958.1 phosphonate metabolism 4266785 4024343 RPD_3827 Rhodopseudomonas palustris BisB5 phosphonate metabolism YP_570949.1 4265679 D 316057 CDS YP_570950.1 91978291 4024344 4266782..4267663 1 NC_007958.1 phosphonate metabolism PhnJ 4267663 4024344 RPD_3828 Rhodopseudomonas palustris BisB5 phosphonate metabolism PhnJ YP_570950.1 4266782 D 316057 CDS YP_570951.1 91978292 4024345 4267656..4268456 1 NC_007958.1 phosphonate C-P lyase system protein PhnK 4268456 phnK 4024345 phnK Rhodopseudomonas palustris BisB5 phosphonate C-P lyase system protein PhnK YP_570951.1 4267656 D 316057 CDS YP_570952.1 91978293 4024346 4268453..4269163 1 NC_007958.1 phosphonate C-P lyase system, PhnL 4269163 4024346 RPD_3830 Rhodopseudomonas palustris BisB5 phosphonate C-P lyase system, PhnL YP_570952.1 4268453 D 316057 CDS YP_570953.1 91978294 4024347 4269179..4270333 1 NC_007958.1 phosphonate metabolism PhnM 4270333 4024347 RPD_3831 Rhodopseudomonas palustris BisB5 phosphonate metabolism PhnM YP_570953.1 4269179 D 316057 CDS YP_570954.1 91978295 4024348 4270330..4270923 1 NC_007958.1 phosphonate metabolism, 1,5-bisphosphokinase PhnN 4270923 4024348 RPD_3832 Rhodopseudomonas palustris BisB5 phosphonate metabolism, 1,5-bisphosphokinase PhnN YP_570954.1 4270330 D 316057 CDS YP_570955.1 91978296 4024349 4270932..4271549 1 NC_007958.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4271549 4024349 RPD_3833 Rhodopseudomonas palustris BisB5 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_570955.1 4270932 D 316057 CDS YP_570956.1 91978297 4024350 complement(4271613..4272140) 1 NC_007958.1 Ferritin and Dps 4272140 4024350 RPD_3834 Rhodopseudomonas palustris BisB5 Ferritin and Dps YP_570956.1 4271613 R 316057 CDS YP_570957.1 91978298 4024351 4272420..4273115 1 NC_007958.1 type 12 methyltransferase 4273115 4024351 RPD_3835 Rhodopseudomonas palustris BisB5 type 12 methyltransferase YP_570957.1 4272420 D 316057 CDS YP_570958.1 91978299 4024352 4273282..4275267 1 NC_007958.1 hypothetical protein 4275267 4024352 RPD_3836 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570958.1 4273282 D 316057 CDS YP_570959.1 91978300 4024353 complement(4275356..4276549) 1 NC_007958.1 putative deoxyribonuclease 4276549 4024353 RPD_3837 Rhodopseudomonas palustris BisB5 putative deoxyribonuclease YP_570959.1 4275356 R 316057 CDS YP_570960.1 91978301 4024354 complement(4276641..4277468) 1 NC_007958.1 transglutaminase-like protein 4277468 4024354 RPD_3838 Rhodopseudomonas palustris BisB5 transglutaminase-like protein YP_570960.1 4276641 R 316057 CDS YP_570961.1 91978302 4024355 4277761..4278030 1 NC_007958.1 hypothetical protein 4278030 4024355 RPD_3839 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570961.1 4277761 D 316057 CDS YP_570962.1 91978303 4024356 4278070..4278345 1 NC_007958.1 hypothetical protein 4278345 4024356 RPD_3840 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570962.1 4278070 D 316057 CDS YP_570963.1 91978304 4024357 4278483..4278638 1 NC_007958.1 hypothetical protein 4278638 4024357 RPD_3841 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570963.1 4278483 D 316057 CDS YP_570964.1 91978305 4024358 complement(4278720..4280099) 1 NC_007958.1 two component, sigma54 specific, transcriptional regulator, Fis family 4280099 4024358 RPD_3842 Rhodopseudomonas palustris BisB5 two component, sigma54 specific, transcriptional regulator, Fis family YP_570964.1 4278720 R 316057 CDS YP_570965.1 91978306 4024359 complement(4280149..4280499) 1 NC_007958.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 4280499 4024359 RPD_3843 Rhodopseudomonas palustris BisB5 flagellar motor switch protein YP_570965.1 4280149 R 316057 CDS YP_570966.1 91978307 4024360 complement(4280518..4281135) 1 NC_007958.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 4281135 fliH 4024360 fliH Rhodopseudomonas palustris BisB5 flagellar assembly protein H YP_570966.1 4280518 R 316057 CDS YP_570967.1 91978308 4024361 complement(4281135..4282223) 1 NC_007958.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 4282223 fliG 4024361 fliG Rhodopseudomonas palustris BisB5 flagellar motor switch protein G YP_570967.1 4281135 R 316057 CDS YP_570968.1 91978309 4024362 complement(4282230..4283828) 1 NC_007958.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 4283828 fliF 4024362 fliF Rhodopseudomonas palustris BisB5 flagellar MS-ring protein YP_570968.1 4282230 R 316057 CDS YP_570969.1 91978310 4024363 complement(4284003..4284278) 1 NC_007958.1 hypothetical protein 4284278 4024363 RPD_3847 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570969.1 4284003 R 316057 CDS YP_570970.1 91978311 4024364 complement(4284555..4286153) 1 NC_007958.1 FAD linked oxidase-like protein 4286153 4024364 RPD_3848 Rhodopseudomonas palustris BisB5 FAD linked oxidase-like protein YP_570970.1 4284555 R 316057 CDS YP_570971.1 91978312 4024365 complement(4286381..4288435) 1 NC_007958.1 outer membrane autotransporter barrel domain-containing protein 4288435 4024365 RPD_3849 Rhodopseudomonas palustris BisB5 outer membrane autotransporter barrel domain-containing protein YP_570971.1 4286381 R 316057 CDS YP_570972.1 91978313 4024366 complement(4288582..4289115) 1 NC_007958.1 NADH ubiquinone oxidoreductase, 20 kDa subunit 4289115 4024366 RPD_3850 Rhodopseudomonas palustris BisB5 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_570972.1 4288582 R 316057 CDS YP_570973.1 91978314 4024367 complement(4289118..4290629) 1 NC_007958.1 NADH-ubiquinone oxidoreductase subunit 49kDa 4290629 4024367 RPD_3851 Rhodopseudomonas palustris BisB5 NADH-ubiquinone oxidoreductase subunit 49kDa YP_570973.1 4289118 R 316057 CDS YP_570974.1 91978315 4024368 complement(4290646..4292097) 1 NC_007958.1 hydrogenase 4 subunit F 4292097 4024368 RPD_3852 Rhodopseudomonas palustris BisB5 hydrogenase 4 subunit F YP_570974.1 4290646 R 316057 CDS YP_570975.1 91978316 4024369 complement(4292094..4292756) 1 NC_007958.1 hypothetical protein 4292756 4024369 RPD_3853 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570975.1 4292094 R 316057 CDS YP_570976.1 91978317 4024370 complement(4292759..4293709) 1 NC_007958.1 respiratory-chain NADH dehydrogenase subunit 1 4293709 4024370 RPD_3854 Rhodopseudomonas palustris BisB5 respiratory-chain NADH dehydrogenase subunit 1 YP_570976.1 4292759 R 316057 CDS YP_570977.1 91978318 4024371 complement(4293706..4295724) 1 NC_007958.1 hydrogenase 4 subunit B 4295724 4024371 RPD_3855 Rhodopseudomonas palustris BisB5 hydrogenase 4 subunit B YP_570977.1 4293706 R 316057 CDS YP_570978.1 91978319 4024372 4295752..4296096 1 NC_007958.1 hypothetical protein 4296096 4024372 RPD_3856 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570978.1 4295752 D 316057 CDS YP_570979.1 91978320 4024373 4296167..4297009 1 NC_007958.1 cobalamin 5'-phosphate synthase 4297009 4024373 RPD_3857 Rhodopseudomonas palustris BisB5 cobalamin 5'-phosphate synthase YP_570979.1 4296167 D 316057 CDS YP_570980.1 91978321 4024374 complement(4297019..4297363) 1 NC_007958.1 putative formamidase regulatory protein FmdB 4297363 4024374 RPD_3858 Rhodopseudomonas palustris BisB5 putative formamidase regulatory protein FmdB YP_570980.1 4297019 R 316057 CDS YP_570981.1 91978322 4024375 complement(4297463..4298692) 1 NC_007958.1 formamidase 4298692 4024375 RPD_3859 Rhodopseudomonas palustris BisB5 formamidase YP_570981.1 4297463 R 316057 CDS YP_570982.1 91978323 4024376 complement(4298738..4299427) 1 NC_007958.1 ABC transporter-like protein 4299427 4024376 RPD_3860 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570982.1 4298738 R 316057 CDS YP_570983.1 91978324 4024377 complement(4299439..4300194) 1 NC_007958.1 ABC transporter-like protein 4300194 4024377 RPD_3861 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_570983.1 4299439 R 316057 CDS YP_570984.1 91978325 4024378 complement(4300205..4301356) 1 NC_007958.1 inner-membrane translocator 4301356 4024378 RPD_3862 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_570984.1 4300205 R 316057 CDS YP_570985.1 91978326 4024379 complement(4301371..4302297) 1 NC_007958.1 inner-membrane translocator 4302297 4024379 RPD_3863 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_570985.1 4301371 R 316057 CDS YP_570986.1 91978327 4024380 complement(4302470..4303732) 1 NC_007958.1 amide-urea binding protein 4303732 4024380 RPD_3864 Rhodopseudomonas palustris BisB5 amide-urea binding protein YP_570986.1 4302470 R 316057 CDS YP_570987.1 91978328 4024381 4303889..4307257 1 NC_007958.1 ATPase-like ATP-binding protein 4307257 4024381 RPD_3865 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_570987.1 4303889 D 316057 CDS YP_570988.1 91978329 4024382 4307247..4308176 1 NC_007958.1 response regulator receiver 4308176 4024382 RPD_3866 Rhodopseudomonas palustris BisB5 response regulator receiver YP_570988.1 4307247 D 316057 CDS YP_570989.1 91978330 4024383 complement(4308280..4308438) 1 NC_007958.1 hypothetical protein 4308438 4024383 RPD_3867 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570989.1 4308280 R 316057 CDS YP_570990.1 91978331 4024384 complement(4308443..4309141) 1 NC_007958.1 hypothetical protein 4309141 4024384 RPD_3868 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570990.1 4308443 R 316057 CDS YP_570991.1 91978332 4024385 complement(4309168..4309560) 1 NC_007958.1 hypothetical protein 4309560 4024385 RPD_3869 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570991.1 4309168 R 316057 CDS YP_570992.1 91978333 4024386 complement(4309565..4310146) 1 NC_007958.1 hypothetical protein 4310146 4024386 RPD_3870 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570992.1 4309565 R 316057 CDS YP_570993.1 91978334 4024387 complement(4310167..4311390) 1 NC_007958.1 late embryogenesis abundant protein 4311390 4024387 RPD_3871 Rhodopseudomonas palustris BisB5 late embryogenesis abundant protein YP_570993.1 4310167 R 316057 CDS YP_570994.1 91978335 4024388 4311744..4313252 1 NC_007958.1 AMP-dependent synthetase and ligase 4313252 4024388 RPD_3872 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_570994.1 4311744 D 316057 CDS YP_570995.1 91978336 4024389 complement(4313354..4313632) 1 NC_007958.1 hypothetical protein 4313632 4024389 RPD_3873 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570995.1 4313354 R 316057 CDS YP_570996.1 91978337 4024390 4313819..4314553 1 NC_007958.1 dienelactone hydrolase 4314553 4024390 RPD_3874 Rhodopseudomonas palustris BisB5 dienelactone hydrolase YP_570996.1 4313819 D 316057 CDS YP_570997.1 91978338 4024391 4314572..4315438 1 NC_007958.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 4315438 4024391 RPD_3875 Rhodopseudomonas palustris BisB5 prolipoprotein diacylglyceryl transferase YP_570997.1 4314572 D 316057 CDS YP_570998.1 91978339 4024392 4315435..4316565 1 NC_007958.1 hypothetical protein 4316565 4024392 RPD_3876 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570998.1 4315435 D 316057 CDS YP_570999.1 91978340 4024393 4316562..4317329 1 NC_007958.1 hypothetical protein 4317329 4024393 RPD_3877 Rhodopseudomonas palustris BisB5 hypothetical protein YP_570999.1 4316562 D 316057 CDS YP_571000.1 91978341 4024394 4317574..4318200 1 NC_007958.1 hypothetical protein 4318200 4024394 RPD_3878 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571000.1 4317574 D 316057 CDS YP_571001.1 91978342 4024395 4318357..4319310 1 NC_007958.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 4319310 4024395 RPD_3879 Rhodopseudomonas palustris BisB5 ribose-phosphate pyrophosphokinase YP_571001.1 4318357 D 316057 CDS YP_571002.1 91978343 4024396 complement(4319553..4320086) 1 NC_007958.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; riboflavin synthase subunit beta 4320086 4024396 RPD_3880 Rhodopseudomonas palustris BisB5 riboflavin synthase subunit beta YP_571002.1 4319553 R 316057 CDS YP_571003.1 91978344 4024397 4320402..4320941 1 NC_007958.1 hypothetical protein 4320941 4024397 RPD_3881 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571003.1 4320402 D 316057 CDS YP_571004.1 91978345 4024398 4321059..4321904 1 NC_007958.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 4321904 4024398 RPD_3882 Rhodopseudomonas palustris BisB5 pyrroline-5-carboxylate reductase YP_571004.1 4321059 D 316057 CDS YP_571005.1 91978346 4024399 complement(4321953..4323341) 1 NC_007958.1 periplasmic sensor signal transduction histidine kinase 4323341 4024399 RPD_3883 Rhodopseudomonas palustris BisB5 periplasmic sensor signal transduction histidine kinase YP_571005.1 4321953 R 316057 CDS YP_571006.1 91978347 4024400 complement(4323347..4324072) 1 NC_007958.1 winged helix family two component transcriptional regulator 4324072 4024400 RPD_3884 Rhodopseudomonas palustris BisB5 winged helix family two component transcriptional regulator YP_571006.1 4323347 R 316057 CDS YP_571007.1 91978348 4024401 complement(4324069..4324626) 1 NC_007958.1 MarR family transcriptional regulator 4324626 4024401 RPD_3885 Rhodopseudomonas palustris BisB5 MarR family transcriptional regulator YP_571007.1 4324069 R 316057 CDS YP_571008.1 91978349 4024402 4324877..4325989 1 NC_007958.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4325989 4024402 RPD_3886 Rhodopseudomonas palustris BisB5 branched-chain amino acid aminotransferase YP_571008.1 4324877 D 316057 CDS YP_571009.1 91978350 4024403 complement(4326049..4326273) 1 NC_007958.1 hypothetical protein 4326273 4024403 RPD_3887 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571009.1 4326049 R 316057 CDS YP_571010.1 91978351 4024404 4326375..4326719 1 NC_007958.1 hypothetical protein 4326719 4024404 RPD_3888 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571010.1 4326375 D 316057 CDS YP_571011.1 91978352 4024405 complement(4326756..4327640) 1 NC_007958.1 hypothetical protein 4327640 4024405 RPD_3889 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571011.1 4326756 R 316057 CDS YP_571012.1 91978353 4024406 4327905..4328060 1 NC_007958.1 antenna complex subunit alpha/beta 4328060 4024406 RPD_3890 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_571012.1 4327905 D 316057 CDS YP_571013.1 91978354 4024407 4328073..4328276 1 NC_007958.1 antenna complex subunit alpha/beta 4328276 4024407 RPD_3891 Rhodopseudomonas palustris BisB5 antenna complex subunit alpha/beta YP_571013.1 4328073 D 316057 CDS YP_571014.1 91978355 4024408 4328844..4329062 1 NC_007958.1 hypothetical protein 4329062 4024408 RPD_3892 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571014.1 4328844 D 316057 CDS YP_571015.1 91978356 4024409 complement(4329311..4330936) 1 NC_007958.1 hypothetical protein 4330936 4024409 RPD_3893 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571015.1 4329311 R 316057 CDS YP_571016.1 91978357 4024410 complement(4330974..4332266) 1 NC_007958.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 4332266 4024410 RPD_3894 Rhodopseudomonas palustris BisB5 adenylosuccinate synthetase YP_571016.1 4330974 R 316057 CDS YP_571017.1 91978358 4024411 4332590..4333414 1 NC_007958.1 aldo/keto reductase 4333414 4024411 RPD_3895 Rhodopseudomonas palustris BisB5 aldo/keto reductase YP_571017.1 4332590 D 316057 CDS YP_571018.1 91978359 4024412 complement(4333439..4334065) 1 NC_007958.1 type 11 methyltransferase 4334065 4024412 RPD_3896 Rhodopseudomonas palustris BisB5 type 11 methyltransferase YP_571018.1 4333439 R 316057 CDS YP_571019.1 91978360 4024413 4334718..4335755 1 NC_007958.1 hypothetical protein 4335755 4024413 RPD_3897 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571019.1 4334718 D 316057 CDS YP_571020.1 91978361 4024414 complement(4335788..4336222) 1 NC_007958.1 hypothetical protein 4336222 4024414 RPD_3898 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571020.1 4335788 R 316057 CDS YP_571021.1 91978362 4024415 4336482..4337327 1 NC_007958.1 hypothetical protein 4337327 4024415 RPD_3899 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571021.1 4336482 D 316057 CDS YP_571022.1 91978363 4024416 4337380..4338405 1 NC_007958.1 hypothetical protein 4338405 4024416 RPD_3900 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571022.1 4337380 D 316057 CDS YP_571023.1 91978364 4024417 4338509..4339486 1 NC_007958.1 hypothetical protein 4339486 4024417 RPD_3901 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571023.1 4338509 D 316057 CDS YP_571024.1 91978365 4024418 complement(4339557..4340528) 1 NC_007958.1 rubrerythrin 4340528 4024418 RPD_3902 Rhodopseudomonas palustris BisB5 rubrerythrin YP_571024.1 4339557 R 316057 CDS YP_571025.1 91978366 4024419 4340710..4342065 1 NC_007958.1 hypothetical protein 4342065 4024419 RPD_3903 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571025.1 4340710 D 316057 CDS YP_571026.1 91978367 4024420 complement(4342248..4343948) 1 NC_007958.1 chemotaxis sensory transducer 4343948 4024420 RPD_3904 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_571026.1 4342248 R 316057 CDS YP_571027.1 91978368 4024421 complement(4344160..4345749) 1 NC_007958.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 4345749 4024421 RPD_3905 Rhodopseudomonas palustris BisB5 D-3-phosphoglycerate dehydrogenase YP_571027.1 4344160 R 316057 CDS YP_571028.1 91978369 4024422 complement(4345918..4347087) 1 NC_007958.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 4347087 4024422 RPD_3906 Rhodopseudomonas palustris BisB5 phosphoserine aminotransferase YP_571028.1 4345918 R 316057 CDS YP_571029.1 91978370 4024423 complement(4347306..4348580) 1 NC_007958.1 chemotaxis sensory transducer 4348580 4024423 RPD_3907 Rhodopseudomonas palustris BisB5 chemotaxis sensory transducer YP_571029.1 4347306 R 316057 CDS YP_571030.1 91978371 4024424 complement(4348585..4349109) 1 NC_007958.1 methyl-accepting chemotaxis sensory transducer 4349109 4024424 RPD_3908 Rhodopseudomonas palustris BisB5 methyl-accepting chemotaxis sensory transducer YP_571030.1 4348585 R 316057 CDS YP_571031.1 91978372 4024425 complement(4349272..4349742) 1 NC_007958.1 GCN5-like N-acetyltransferase 4349742 4024425 RPD_3909 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_571031.1 4349272 R 316057 CDS YP_571032.1 91978373 4024426 complement(4349739..4350344) 1 NC_007958.1 glutathione S-transferase-like protein 4350344 4024426 RPD_3910 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_571032.1 4349739 R 316057 CDS YP_571033.1 91978374 4024427 complement(4350415..4351209) 1 NC_007958.1 hypothetical protein 4351209 4024427 RPD_3911 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571033.1 4350415 R 316057 CDS YP_571034.1 91978375 4024428 complement(4351364..4352206) 1 NC_007958.1 hypothetical protein 4352206 4024428 RPD_3912 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571034.1 4351364 R 316057 CDS YP_571035.1 91978376 4024429 complement(4352553..4353818) 1 NC_007958.1 major facilitator transporter 4353818 4024429 RPD_3913 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_571035.1 4352553 R 316057 CDS YP_571036.1 91978377 4024430 complement(4353999..4355351) 1 NC_007958.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 4355351 glmM 4024430 glmM Rhodopseudomonas palustris BisB5 phosphoglucosamine mutase YP_571036.1 4353999 R 316057 CDS YP_571037.1 91978378 4024431 complement(4355563..4355736) 1 NC_007958.1 hypothetical protein 4355736 4024431 RPD_3915 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571037.1 4355563 R 316057 CDS YP_571038.1 91978379 4024432 4355903..4357042 1 NC_007958.1 L-lactate dehydrogenase (cytochrome) 4357042 4024432 RPD_3916 Rhodopseudomonas palustris BisB5 L-lactate dehydrogenase (cytochrome) YP_571038.1 4355903 D 316057 CDS YP_571039.1 91978380 4024433 4357187..4358002 1 NC_007958.1 enoyl-CoA hydratase/isomerase 4358002 4024433 RPD_3917 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_571039.1 4357187 D 316057 CDS YP_571040.1 91978381 4024434 4358100..4358729 1 NC_007958.1 hypothetical protein 4358729 4024434 RPD_3918 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571040.1 4358100 D 316057 CDS YP_571041.1 91978382 4024435 complement(4358856..4359707) 1 NC_007958.1 shikimate 5-dehydrogenase 4359707 4024435 RPD_3919 Rhodopseudomonas palustris BisB5 shikimate 5-dehydrogenase YP_571041.1 4358856 R 316057 CDS YP_571042.1 91978383 4024436 complement(4359704..4359982) 1 NC_007958.1 XRE family transcriptional regulator 4359982 4024436 RPD_3920 Rhodopseudomonas palustris BisB5 XRE family transcriptional regulator YP_571042.1 4359704 R 316057 CDS YP_571043.1 91978384 4024437 complement(4360091..4362142) 1 NC_007958.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4362142 4024437 RPD_3921 Rhodopseudomonas palustris BisB5 elongation factor G YP_571043.1 4360091 R 316057 CDS YP_571044.1 91978385 4024438 4362173..4362913 1 NC_007958.1 hypothetical protein 4362913 4024438 RPD_3922 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571044.1 4362173 D 316057 CDS YP_571045.1 91978386 4024439 complement(4363017..4363487) 1 NC_007958.1 hypothetical protein 4363487 4024439 RPD_3923 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571045.1 4363017 R 316057 CDS YP_571046.1 91978387 4024440 complement(4363732..4364259) 1 NC_007958.1 hypothetical protein 4364259 4024440 RPD_3924 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571046.1 4363732 R 316057 CDS YP_571047.1 91978388 4024441 complement(4364397..4365599) 1 NC_007958.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 4365599 4024441 RPD_3925 Rhodopseudomonas palustris BisB5 aspartate aminotransferase YP_571047.1 4364397 R 316057 CDS YP_571048.1 91978389 4024442 complement(4365672..4365920) 1 NC_007958.1 hypothetical protein 4365920 4024442 RPD_3926 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571048.1 4365672 R 316057 CDS YP_571049.1 91978390 4024443 4366045..4366731 1 NC_007958.1 glutathione S-transferase-like protein 4366731 4024443 RPD_3927 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_571049.1 4366045 D 316057 CDS YP_571050.1 91978391 4024444 4367125..4368288 1 NC_007958.1 glucose sorbosone dehydrogenase 4368288 4024444 RPD_3928 Rhodopseudomonas palustris BisB5 glucose sorbosone dehydrogenase YP_571050.1 4367125 D 316057 CDS YP_571051.1 91978392 4024445 complement(4368401..4368760) 1 NC_007958.1 hypothetical protein 4368760 4024445 RPD_3929 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571051.1 4368401 R 316057 CDS YP_571052.1 91978393 4024446 4369058..4369909 1 NC_007958.1 phospholipid/glycerol acyltransferase 4369909 4024446 RPD_3930 Rhodopseudomonas palustris BisB5 phospholipid/glycerol acyltransferase YP_571052.1 4369058 D 316057 CDS YP_571053.1 91978394 4024447 4370000..4370941 1 NC_007958.1 aldo/keto reductase 4370941 4024447 RPD_3931 Rhodopseudomonas palustris BisB5 aldo/keto reductase YP_571053.1 4370000 D 316057 CDS YP_571054.1 91978395 4024448 4371125..4372018 1 NC_007958.1 hypothetical protein 4372018 4024448 RPD_3932 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571054.1 4371125 D 316057 CDS YP_571055.1 91978396 4024449 4372235..4373050 1 NC_007958.1 HAD family hydrolase 4373050 4024449 RPD_3933 Rhodopseudomonas palustris BisB5 HAD family hydrolase YP_571055.1 4372235 D 316057 CDS YP_571056.1 91978397 4024450 4373401..4374600 1 NC_007958.1 transposase, IS204/IS1001/IS1096/IS1165 4374600 4024450 RPD_3934 Rhodopseudomonas palustris BisB5 transposase, IS204/IS1001/IS1096/IS1165 YP_571056.1 4373401 D 316057 CDS YP_571057.1 91978398 4024451 4374600..4374956 1 NC_007958.1 putative transposase 4374956 4024451 RPD_3935 Rhodopseudomonas palustris BisB5 putative transposase YP_571057.1 4374600 D 316057 CDS YP_571058.1 91978399 4024452 4375060..4376091 1 NC_007958.1 transposase IS116/IS110/IS902 4376091 4024452 RPD_3936 Rhodopseudomonas palustris BisB5 transposase IS116/IS110/IS902 YP_571058.1 4375060 D 316057 CDS YP_571059.1 91978400 4024453 4376289..4376663 1 NC_007958.1 hypothetical protein 4376663 4024453 RPD_3937 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571059.1 4376289 D 316057 CDS YP_571060.1 91978401 4024454 complement(4377190..4378344) 1 NC_007958.1 hypothetical protein 4378344 4024454 RPD_3938 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571060.1 4377190 R 316057 CDS YP_571061.1 91978402 4024455 complement(4378341..4379585) 1 NC_007958.1 MobA/MobL protein 4379585 4024455 RPD_3939 Rhodopseudomonas palustris BisB5 MobA/MobL protein YP_571061.1 4378341 R 316057 CDS YP_571062.1 91978403 4024456 4379671..4380315 1 NC_007958.1 Type IV secretory pathway VirD4 components-like 4380315 4024456 RPD_3940 Rhodopseudomonas palustris BisB5 Type IV secretory pathway VirD4 components-like YP_571062.1 4379671 D 316057 CDS YP_571063.1 91978404 4024457 4380650..4382389 1 NC_007958.1 hypothetical protein 4382389 4024457 RPD_3941 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571063.1 4380650 D 316057 CDS YP_571064.1 91978405 4024458 4382628..4387577 1 NC_007958.1 hypothetical protein 4387577 4024458 RPD_3942 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571064.1 4382628 D 316057 CDS YP_571065.1 91978406 4024459 4387641..4388867 1 NC_007958.1 hypothetical protein 4388867 4024459 RPD_3943 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571065.1 4387641 D 316057 CDS YP_571066.1 91978407 4024460 4388864..4389859 1 NC_007958.1 hypothetical protein 4389859 4024460 RPD_3944 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571066.1 4388864 D 316057 CDS YP_571067.1 91978408 4024461 complement(4389999..4391720) 1 NC_007958.1 hypothetical protein 4391720 4024461 RPD_3945 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571067.1 4389999 R 316057 CDS YP_571068.1 91978409 4024464 complement(4392966..4393235) 1 NC_007958.1 conjugal transfer TraD 4393235 4024464 RPD_3948 Rhodopseudomonas palustris BisB5 conjugal transfer TraD YP_571068.1 4392966 R 316057 CDS YP_571069.1 91978410 4024465 complement(4393237..4393629) 1 NC_007958.1 hypothetical protein 4393629 4024465 RPD_3949 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571069.1 4393237 R 316057 CDS YP_571070.1 91978411 4024466 4393639..4396758 1 NC_007958.1 MobA/MobL family protein; conjugal transfer relaxase TraA 4396758 4024466 RPD_3950 Rhodopseudomonas palustris BisB5 conjugal transfer relaxase TraA YP_571070.1 4393639 D 316057 CDS YP_571071.1 91978412 4024467 complement(4397755..4398546) 1 NC_007958.1 hypothetical protein 4398546 4024467 RPD_3951 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571071.1 4397755 R 316057 CDS YP_571072.1 91978413 4024468 complement(4398770..4400899) 1 NC_007958.1 hypothetical protein 4400899 4024468 RPD_3952 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571072.1 4398770 R 316057 CDS YP_571073.1 91978414 4024469 complement(4400896..4402170) 1 NC_007958.1 metallophosphoesterase 4402170 4024469 RPD_3953 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_571073.1 4400896 R 316057 CDS YP_571074.1 91978415 4024470 4402532..4402771 1 NC_007958.1 hypothetical protein 4402771 4024470 RPD_3954 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571074.1 4402532 D 316057 CDS YP_571075.1 91978416 4024471 4402877..4404100 1 NC_007958.1 endodeoxyribonuclease RusA 4404100 4024471 RPD_3955 Rhodopseudomonas palustris BisB5 endodeoxyribonuclease RusA YP_571075.1 4402877 D 316057 CDS YP_571076.1 91978417 4024472 complement(4404206..4405396) 1 NC_007958.1 hypothetical protein 4405396 4024472 RPD_3956 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571076.1 4404206 R 316057 CDS YP_571077.1 91978418 4024473 complement(4405407..4405649) 1 NC_007958.1 hypothetical protein 4405649 4024473 RPD_3957 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571077.1 4405407 R 316057 CDS YP_571078.1 91978419 4024474 4405733..4406221 1 NC_007958.1 hypothetical protein 4406221 4024474 RPD_3958 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571078.1 4405733 D 316057 CDS YP_571079.1 91978420 4024475 4406360..4407988 1 NC_007958.1 recombinase 4407988 4024475 RPD_3959 Rhodopseudomonas palustris BisB5 recombinase YP_571079.1 4406360 D 316057 CDS YP_571080.1 91978421 4024477 complement(4408125..4408466) 1 NC_007958.1 hypothetical protein 4408466 4024477 RPD_3960 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571080.1 4408125 R 316057 CDS YP_571081.1 91978422 4024478 complement(4408508..4409146) 1 NC_007958.1 phosphatidylethanolamine N-methyltransferase 4409146 4024478 RPD_3961 Rhodopseudomonas palustris BisB5 phosphatidylethanolamine N-methyltransferase YP_571081.1 4408508 R 316057 CDS YP_571082.1 91978423 4024479 complement(4409165..4410373) 1 NC_007958.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 4410373 mnmA 4024479 mnmA Rhodopseudomonas palustris BisB5 tRNA-specific 2-thiouridylase MnmA YP_571082.1 4409165 R 316057 CDS YP_571083.1 91978424 4024480 4410684..4412264 1 NC_007958.1 flagellar hook-length control protein 4412264 4024480 RPD_3963 Rhodopseudomonas palustris BisB5 flagellar hook-length control protein YP_571083.1 4410684 D 316057 CDS YP_571084.1 91978425 4024481 4412277..4413005 1 NC_007958.1 flagellar hook capping protein 4413005 4024481 RPD_3964 Rhodopseudomonas palustris BisB5 flagellar hook capping protein YP_571084.1 4412277 D 316057 CDS YP_571085.1 91978426 4024482 complement(4413018..4413836) 1 NC_007958.1 lytic murein transglycosylase 4413836 4024482 RPD_3965 Rhodopseudomonas palustris BisB5 lytic murein transglycosylase YP_571085.1 4413018 R 316057 CDS YP_571086.1 91978427 4024483 4414075..4414434 1 NC_007958.1 hypothetical protein 4414434 4024483 RPD_3966 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571086.1 4414075 D 316057 CDS YP_571087.1 91978428 4024484 complement(4414558..4415121) 1 NC_007958.1 peptidase C56, PfpI 4415121 4024484 RPD_3967 Rhodopseudomonas palustris BisB5 peptidase C56, PfpI YP_571087.1 4414558 R 316057 CDS YP_571088.1 91978429 4024485 complement(4415876..4416202) 1 NC_007958.1 cupin 2 barrel domain-containing protein 4416202 4024485 RPD_3968 Rhodopseudomonas palustris BisB5 cupin 2 barrel domain-containing protein YP_571088.1 4415876 R 316057 CDS YP_571089.1 91978430 4024486 4416453..4417580 1 NC_007958.1 catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 4417580 4024486 RPD_3969 Rhodopseudomonas palustris BisB5 3-oxoacyl-(acyl carrier protein) synthase III YP_571089.1 4416453 D 316057 CDS YP_571090.1 91978431 4024487 4417706..4417924 1 NC_007958.1 transcriptional regulator 4417924 4024487 RPD_3970 Rhodopseudomonas palustris BisB5 transcriptional regulator YP_571090.1 4417706 D 316057 CDS YP_571091.1 91978432 4024488 4418005..4418997 1 NC_007958.1 filamentation induced by cAMP protein Fic 4418997 4024488 RPD_3971 Rhodopseudomonas palustris BisB5 filamentation induced by cAMP protein Fic YP_571091.1 4418005 D 316057 CDS YP_571092.1 91978433 4024489 complement(4419952..4422087) 1 NC_007958.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 4422087 4024489 RPD_3972 Rhodopseudomonas palustris BisB5 RNA polymerase sigma factor RpoD YP_571092.1 4419952 R 316057 CDS YP_571093.1 91978434 4024490 complement(4422346..4424403) 1 NC_007958.1 synthesizes RNA primers at the replication forks; DNA primase 4424403 dnaG 4024490 dnaG Rhodopseudomonas palustris BisB5 DNA primase YP_571093.1 4422346 R 316057 CDS YP_571094.1 91978435 4024491 4424598..4424945 1 NC_007958.1 hypothetical protein 4424945 4024491 RPD_3974 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571094.1 4424598 D 316057 CDS YP_571095.1 91978436 4024492 4424965..4425204 1 NC_007958.1 hypothetical protein 4425204 4024492 RPD_3975 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571095.1 4424965 D 316057 CDS YP_571096.1 91978437 4024493 4425502..4425744 1 NC_007958.1 hypothetical protein 4425744 4024493 RPD_3976 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571096.1 4425502 D 316057 CDS YP_571097.1 91978438 4024494 complement(4425827..4426234) 1 NC_007958.1 hypothetical protein 4426234 4024494 RPD_3977 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571097.1 4425827 R 316057 CDS YP_571098.1 91978439 4024495 complement(4426251..4427165) 1 NC_007958.1 transglutaminase-like protein 4427165 4024495 RPD_3978 Rhodopseudomonas palustris BisB5 transglutaminase-like protein YP_571098.1 4426251 R 316057 CDS YP_571099.1 91978440 4024496 4427175..4428047 1 NC_007958.1 N-formylglutamate amidohydrolase 4428047 4024496 RPD_3979 Rhodopseudomonas palustris BisB5 N-formylglutamate amidohydrolase YP_571099.1 4427175 D 316057 CDS YP_571100.1 91978441 4024497 complement(4428184..4428801) 1 NC_007958.1 lysine exporter protein LysE/YggA 4428801 4024497 RPD_3980 Rhodopseudomonas palustris BisB5 lysine exporter protein LysE/YggA YP_571100.1 4428184 R 316057 CDS YP_571101.1 91978442 4024498 4428912..4429235 1 NC_007958.1 helix-turn-helix, type 11 4429235 4024498 RPD_3981 Rhodopseudomonas palustris BisB5 helix-turn-helix, type 11 YP_571101.1 4428912 D 316057 CDS YP_571102.1 91978443 4024499 4429228..4429689 1 NC_007958.1 hypothetical protein 4429689 4024499 RPD_3982 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571102.1 4429228 D 316057 CDS YP_571103.1 91978444 4024500 complement(4429729..4430577) 1 NC_007958.1 hypothetical protein 4430577 4024500 RPD_3983 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571103.1 4429729 R 316057 CDS YP_571104.1 91978445 4024501 complement(4430991..4432598) 1 NC_007958.1 AMP-dependent synthetase and ligase 4432598 4024501 RPD_3984 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_571104.1 4430991 R 316057 CDS YP_571105.1 91978446 4024502 complement(4432685..4433140) 1 NC_007958.1 hypothetical protein 4433140 4024502 RPD_3985 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571105.1 4432685 R 316057 CDS YP_571106.1 91978447 4024503 4433598..4434791 1 NC_007958.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 4434791 4024503 RPD_3986 Rhodopseudomonas palustris BisB5 carbamoyl phosphate synthase small subunit YP_571106.1 4433598 D 316057 CDS YP_571107.1 91978448 4024504 4435092..4438235 1 NC_007958.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 4438235 4024504 RPD_3987 Rhodopseudomonas palustris BisB5 excinuclease ABC subunit B YP_571107.1 4435092 D 316057 CDS YP_571108.1 91978449 4024505 4438431..4438586 1 NC_007958.1 hypothetical protein 4438586 4024505 RPD_3988 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571108.1 4438431 D 316057 CDS YP_571109.1 91978450 4024506 4438589..4438876 1 NC_007958.1 hypothetical protein 4438876 4024506 RPD_3989 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571109.1 4438589 D 316057 CDS YP_571110.1 91978451 4024507 complement(4438928..4439293) 1 NC_007958.1 hypothetical protein 4439293 4024507 RPD_3990 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571110.1 4438928 R 316057 CDS YP_571111.1 91978452 4024508 complement(4439652..4440905) 1 NC_007958.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 4440905 4024508 RPD_3991 Rhodopseudomonas palustris BisB5 acetyl-CoA acetyltransferase YP_571111.1 4439652 R 316057 CDS YP_571112.1 91978453 4024509 4441074..4441448 1 NC_007958.1 hypothetical protein 4441448 4024509 RPD_3992 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571112.1 4441074 D 316057 CDS YP_571113.1 91978454 4024510 4441924..4442355 1 NC_007958.1 hypothetical protein 4442355 4024510 RPD_3993 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571113.1 4441924 D 316057 CDS YP_571114.1 91978455 4024511 4442537..4442986 1 NC_007958.1 hypothetical protein 4442986 4024511 RPD_3994 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571114.1 4442537 D 316057 CDS YP_571115.1 91978456 4024512 complement(4443254..4443406) 1 NC_007958.1 hypothetical protein 4443406 4024512 RPD_3995 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571115.1 4443254 R 316057 CDS YP_571116.1 91978457 4024513 complement(4443552..4444034) 1 NC_007958.1 MaoC-like dehydratase 4444034 4024513 RPD_3996 Rhodopseudomonas palustris BisB5 MaoC-like dehydratase YP_571116.1 4443552 R 316057 CDS YP_571117.1 91978458 4024514 complement(4444157..4444624) 1 NC_007958.1 MaoC-like dehydratase 4444624 4024514 RPD_3997 Rhodopseudomonas palustris BisB5 MaoC-like dehydratase YP_571117.1 4444157 R 316057 CDS YP_571118.1 91978459 4024515 4444707..4445000 1 NC_007958.1 hypothetical protein 4445000 4024515 RPD_3998 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571118.1 4444707 D 316057 CDS YP_571119.1 91978460 4024516 complement(4445197..4446294) 1 NC_007958.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 4446294 4024516 RPD_3999 Rhodopseudomonas palustris BisB5 GTP-dependent nucleic acid-binding protein EngD YP_571119.1 4445197 R 316057 CDS YP_571120.1 91978461 4024517 complement(4446424..4447047) 1 NC_007958.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 4447047 4024517 RPD_4000 Rhodopseudomonas palustris BisB5 peptidyl-tRNA hydrolase YP_571120.1 4446424 R 316057 CDS YP_571121.1 91978462 4024518 complement(4447066..4447770) 1 NC_007958.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 4447770 4024518 RPD_4001 Rhodopseudomonas palustris BisB5 50S ribosomal protein L25/general stress protein Ctc YP_571121.1 4447066 R 316057 CDS YP_571122.1 91978463 4024519 complement(4447948..4448826) 1 NC_007958.1 TonB-like protein 4448826 4024519 RPD_4002 Rhodopseudomonas palustris BisB5 TonB-like protein YP_571122.1 4447948 R 316057 CDS YP_571123.1 91978464 4024520 complement(4448823..4449260) 1 NC_007958.1 biopolymer transport protein ExbD/TolR 4449260 4024520 RPD_4003 Rhodopseudomonas palustris BisB5 biopolymer transport protein ExbD/TolR YP_571123.1 4448823 R 316057 CDS YP_571124.1 91978465 4024521 complement(4449264..4450067) 1 NC_007958.1 MotA/TolQ/ExbB proton channel 4450067 4024521 RPD_4004 Rhodopseudomonas palustris BisB5 MotA/TolQ/ExbB proton channel YP_571124.1 4449264 R 316057 CDS YP_571125.1 91978466 4024522 4450438..4451286 1 NC_007958.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4451286 4024522 RPD_4005 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase YP_571125.1 4450438 D 316057 CDS YP_571126.1 91978467 4024523 4451290..4452432 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4452432 4024523 RPD_4006 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_571126.1 4451290 D 316057 CDS YP_571127.1 91978468 4024524 4452448..4453644 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4453644 4024524 RPD_4007 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_571127.1 4452448 D 316057 CDS YP_571128.1 91978469 4024525 complement(4453844..4455178) 1 NC_007958.1 phenylacetate--CoA ligase 4455178 4024525 RPD_4008 Rhodopseudomonas palustris BisB5 phenylacetate--CoA ligase YP_571128.1 4453844 R 316057 CDS YP_571129.1 91978470 4024526 complement(4455199..4455756) 1 NC_007958.1 pyruvate ferredoxin/flavodoxin oxidoreductase 4455756 4024526 RPD_4009 Rhodopseudomonas palustris BisB5 pyruvate ferredoxin/flavodoxin oxidoreductase YP_571129.1 4455199 R 316057 CDS YP_571130.1 91978471 4024527 complement(4455771..4456601) 1 NC_007958.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 4456601 4024527 RPD_4010 Rhodopseudomonas palustris BisB5 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_571130.1 4455771 R 316057 CDS YP_571131.1 91978472 4024528 complement(4456601..4457761) 1 NC_007958.1 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 4457761 4024528 RPD_4011 Rhodopseudomonas palustris BisB5 2-oxoglutarate ferredoxin oxidoreductase subunit alpha YP_571131.1 4456601 R 316057 CDS YP_571132.1 91978473 4024529 complement(4457758..4458705) 1 NC_007958.1 pyruvate ferredoxin/flavodoxin oxidoreductase 4458705 4024529 RPD_4012 Rhodopseudomonas palustris BisB5 pyruvate ferredoxin/flavodoxin oxidoreductase YP_571132.1 4457758 R 316057 CDS YP_571133.1 91978474 4024530 complement(4458702..4460525) 1 NC_007958.1 thiamine pyrophosphate enzyme-like protein 4460525 4024530 RPD_4013 Rhodopseudomonas palustris BisB5 thiamine pyrophosphate enzyme-like protein YP_571133.1 4458702 R 316057 CDS YP_571134.1 91978475 4024531 4460789..4461055 1 NC_007958.1 hypothetical protein 4461055 4024531 RPD_4014 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571134.1 4460789 D 316057 CDS YP_571135.1 91978476 4024532 4461171..4462154 1 NC_007958.1 hypothetical protein 4462154 4024532 RPD_4015 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571135.1 4461171 D 316057 CDS YP_571136.1 91978477 4024533 4462147..4462971 1 NC_007958.1 hypothetical protein 4462971 4024533 RPD_4016 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571136.1 4462147 D 316057 CDS YP_571137.1 91978478 4024534 complement(4462993..4465098) 1 NC_007958.1 adenylyl cyclase class-3/4/guanylyl cyclase 4465098 4024534 RPD_4017 Rhodopseudomonas palustris BisB5 adenylyl cyclase class-3/4/guanylyl cyclase YP_571137.1 4462993 R 316057 CDS YP_571138.1 91978479 4024535 complement(4465177..4465842) 1 NC_007958.1 hypothetical protein 4465842 4024535 RPD_4018 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571138.1 4465177 R 316057 CDS YP_571139.1 91978480 4024536 complement(4466095..4467114) 1 NC_007958.1 hypothetical protein 4467114 4024536 RPD_4019 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571139.1 4466095 R 316057 CDS YP_571140.1 91978481 4024537 complement(4467156..4468259) 1 NC_007958.1 cyclic nucleotide-binding protein 4468259 4024537 RPD_4020 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_571140.1 4467156 R 316057 CDS YP_571141.1 91978482 4024538 4468632..4469255 1 NC_007958.1 hypothetical protein 4469255 4024538 RPD_4021 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571141.1 4468632 D 316057 CDS YP_571142.1 91978483 4024539 complement(4469508..4471118) 1 NC_007958.1 extracellular solute-binding protein 4471118 4024539 RPD_4022 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_571142.1 4469508 R 316057 CDS YP_571143.1 91978484 4024540 4471424..4472554 1 NC_007958.1 catalyzes the release of C-terminal glutamate residues from N-acylating moieties; carboxypeptidase 4472554 4024540 RPD_4023 Rhodopseudomonas palustris BisB5 carboxypeptidase YP_571143.1 4471424 D 316057 CDS YP_571144.1 91978485 4024541 4472731..4473672 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 4473672 4024541 RPD_4024 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_571144.1 4472731 D 316057 CDS YP_571145.1 91978486 4024542 4473684..4474574 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 4474574 4024542 RPD_4025 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_571145.1 4473684 D 316057 CDS YP_571146.1 91978487 4024543 4474571..4476244 1 NC_007958.1 ABC transporter-like protein 4476244 4024543 RPD_4026 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571146.1 4474571 D 316057 CDS YP_571147.1 91978488 4024544 4476346..4476837 1 NC_007958.1 peroxiredoxin-like protein 4476837 4024544 RPD_4027 Rhodopseudomonas palustris BisB5 peroxiredoxin-like protein YP_571147.1 4476346 D 316057 CDS YP_571148.1 91978489 4024545 complement(4476977..4477429) 1 NC_007958.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 4477429 rnhA 4024545 rnhA Rhodopseudomonas palustris BisB5 ribonuclease H YP_571148.1 4476977 R 316057 CDS YP_571149.1 91978490 4024546 complement(4477435..4478415) 1 NC_007958.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 4478415 4024546 RPD_4029 Rhodopseudomonas palustris BisB5 homoserine kinase YP_571149.1 4477435 R 316057 CDS YP_571150.1 91978491 4024547 complement(4478502..4479467) 1 NC_007958.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4479467 ispH 4024547 ispH Rhodopseudomonas palustris BisB5 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_571150.1 4478502 R 316057 CDS YP_571151.1 91978492 4024548 4479726..4480433 1 NC_007958.1 hypothetical protein 4480433 4024548 RPD_4031 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571151.1 4479726 D 316057 CDS YP_571152.1 91978493 4024549 complement(4480602..4482395) 1 NC_007958.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 4482395 mutL 4024549 mutL Rhodopseudomonas palustris BisB5 DNA mismatch repair protein YP_571152.1 4480602 R 316057 CDS YP_571153.1 91978494 4024550 complement(4482676..4483095) 1 NC_007958.1 peptidyl-tRNA hydrolase domain-containing protein 4483095 4024550 RPD_4033 Rhodopseudomonas palustris BisB5 peptidyl-tRNA hydrolase domain-containing protein YP_571153.1 4482676 R 316057 CDS YP_571154.1 91978495 4024551 complement(4483233..4484621) 1 NC_007958.1 peptidase M16-like 4484621 4024551 RPD_4034 Rhodopseudomonas palustris BisB5 peptidase M16-like YP_571154.1 4483233 R 316057 CDS YP_571155.1 91978496 4024552 complement(4484618..4486003) 1 NC_007958.1 peptidase M16-like 4486003 4024552 RPD_4035 Rhodopseudomonas palustris BisB5 peptidase M16-like YP_571155.1 4484618 R 316057 CDS YP_571156.1 91978497 4024553 complement(4486158..4486883) 1 NC_007958.1 hypothetical protein 4486883 4024553 RPD_4036 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571156.1 4486158 R 316057 CDS YP_571157.1 91978498 4024554 complement(4486973..4487470) 1 NC_007958.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 4487470 4024554 RPD_4037 Rhodopseudomonas palustris BisB5 lipoprotein signal peptidase YP_571157.1 4486973 R 316057 CDS YP_571158.1 91978499 4024555 complement(4487627..4490632) 1 NC_007958.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 4490632 ileS 4024555 ileS Rhodopseudomonas palustris BisB5 isoleucyl-tRNA synthetase YP_571158.1 4487627 R 316057 CDS YP_571159.1 91978500 4024556 complement(4490811..4491386) 1 NC_007958.1 maltose O-acetyltransferase 4491386 4024556 RPD_4039 Rhodopseudomonas palustris BisB5 maltose O-acetyltransferase YP_571159.1 4490811 R 316057 CDS YP_571160.1 91978501 4024557 complement(4491383..4492351) 1 NC_007958.1 riboflavin biosynthesis protein RibF 4492351 4024557 RPD_4040 Rhodopseudomonas palustris BisB5 riboflavin biosynthesis protein RibF YP_571160.1 4491383 R 316057 CDS YP_571161.1 91978502 4024558 complement(4492499..4493191) 1 NC_007958.1 ribonuclease T2 4493191 4024558 RPD_4041 Rhodopseudomonas palustris BisB5 ribonuclease T2 YP_571161.1 4492499 R 316057 CDS YP_571162.1 91978503 4024559 complement(4493302..4493763) 1 NC_007958.1 hypothetical protein 4493763 4024559 RPD_4042 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571162.1 4493302 R 316057 CDS YP_571163.1 91978504 4024560 4493928..4494218 1 NC_007958.1 hypothetical protein 4494218 4024560 RPD_4043 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571163.1 4493928 D 316057 CDS YP_571164.1 91978505 4024561 4494232..4494768 1 NC_007958.1 hypothetical protein 4494768 4024561 RPD_4044 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571164.1 4494232 D 316057 CDS YP_571165.1 91978506 4024562 4494931..4495305 1 NC_007958.1 hypothetical protein 4495305 4024562 RPD_4045 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571165.1 4494931 D 316057 CDS YP_571166.1 91978507 4024563 4495439..4497808 1 NC_007958.1 TonB-dependent receptor 4497808 4024563 RPD_4046 Rhodopseudomonas palustris BisB5 TonB-dependent receptor YP_571166.1 4495439 D 316057 CDS YP_571167.1 91978508 4024564 complement(4497968..4498486) 1 NC_007958.1 GCN5-like N-acetyltransferase 4498486 4024564 RPD_4047 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_571167.1 4497968 R 316057 CDS YP_571168.1 91978509 4024565 complement(4498564..4500273) 1 NC_007958.1 mechanosensitive ion channel MscS 4500273 4024565 RPD_4048 Rhodopseudomonas palustris BisB5 mechanosensitive ion channel MscS YP_571168.1 4498564 R 316057 CDS YP_571169.1 91978510 4024566 complement(4500421..4500930) 1 NC_007958.1 NUDIX hydrolase 4500930 4024566 RPD_4049 Rhodopseudomonas palustris BisB5 NUDIX hydrolase YP_571169.1 4500421 R 316057 CDS YP_571170.1 91978511 4024567 4501147..4502025 1 NC_007958.1 metallophosphoesterase 4502025 4024567 RPD_4050 Rhodopseudomonas palustris BisB5 metallophosphoesterase YP_571170.1 4501147 D 316057 CDS YP_571171.1 91978512 4024568 complement(4502035..4502595) 1 NC_007958.1 hypothetical protein 4502595 4024568 RPD_4051 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571171.1 4502035 R 316057 CDS YP_571172.1 91978513 4024569 complement(4502823..4503032) 1 NC_007958.1 hypothetical protein 4503032 4024569 RPD_4052 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571172.1 4502823 R 316057 CDS YP_571173.1 91978514 4024570 complement(4503056..4504693) 1 NC_007958.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 4504693 4024570 RPD_4053 Rhodopseudomonas palustris BisB5 isocitrate lyase YP_571173.1 4503056 R 316057 CDS YP_571174.1 91978515 4024571 4504908..4506350 1 NC_007958.1 hypothetical protein 4506350 4024571 RPD_4054 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571174.1 4504908 D 316057 CDS YP_571175.1 91978516 4024572 4506597..4507985 1 NC_007958.1 lytic murein transglycosylase 4507985 4024572 RPD_4055 Rhodopseudomonas palustris BisB5 lytic murein transglycosylase YP_571175.1 4506597 D 316057 CDS YP_571176.1 91978517 4024573 4508065..4509249 1 NC_007958.1 extracellular ligand-binding receptor 4509249 4024573 RPD_4056 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_571176.1 4508065 D 316057 CDS YP_571177.1 91978518 4024574 4509393..4510157 1 NC_007958.1 ABC transporter-like protein 4510157 4024574 RPD_4057 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571177.1 4509393 D 316057 CDS YP_571178.1 91978519 4024575 4510303..4511025 1 NC_007958.1 ABC transporter-like protein 4511025 4024575 RPD_4058 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571178.1 4510303 D 316057 CDS YP_571179.1 91978520 4024576 4511022..4512032 1 NC_007958.1 inner-membrane translocator 4512032 4024576 RPD_4059 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_571179.1 4511022 D 316057 CDS YP_571180.1 91978521 4024577 4512058..4513125 1 NC_007958.1 inner-membrane translocator 4513125 4024577 RPD_4060 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_571180.1 4512058 D 316057 CDS YP_571181.1 91978522 4024578 4513336..4513641 1 NC_007958.1 hypothetical protein 4513641 4024578 RPD_4061 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571181.1 4513336 D 316057 CDS YP_571182.1 91978523 4024579 4513704..4515092 1 NC_007958.1 NADH:flavin oxidoreductase/NADH oxidase 4515092 4024579 RPD_4062 Rhodopseudomonas palustris BisB5 NADH:flavin oxidoreductase/NADH oxidase YP_571182.1 4513704 D 316057 CDS YP_571183.1 91978524 4024580 complement(4515295..4517094) 1 NC_007958.1 extracellular solute-binding protein 4517094 4024580 RPD_4063 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_571183.1 4515295 R 316057 CDS YP_571184.1 91978525 4024581 complement(4517164..4517550) 1 NC_007958.1 hypothetical protein 4517550 4024581 RPD_4064 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571184.1 4517164 R 316057 CDS YP_571185.1 91978526 4024582 complement(4517558..4518364) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 4518364 4024582 RPD_4065 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_571185.1 4517558 R 316057 CDS YP_571186.1 91978527 4024583 complement(4518364..4519266) 1 NC_007958.1 binding-protein-dependent transport systems inner membrane component 4519266 4024583 RPD_4066 Rhodopseudomonas palustris BisB5 binding-protein-dependent transport systems inner membrane component YP_571186.1 4518364 R 316057 CDS YP_571187.1 91978528 4024584 complement(4519266..4520369) 1 NC_007958.1 ABC transporter-like protein 4520369 4024584 RPD_4067 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571187.1 4519266 R 316057 CDS YP_571188.1 91978529 4024585 complement(4520382..4521461) 1 NC_007958.1 ABC transporter-like protein 4521461 4024585 RPD_4068 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571188.1 4520382 R 316057 CDS YP_571189.1 91978530 4024586 complement(4521458..4522999) 1 NC_007958.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 4522999 glpD 4024586 glpD Rhodopseudomonas palustris BisB5 glycerol-3-phosphate dehydrogenase YP_571189.1 4521458 R 316057 CDS YP_571190.1 91978531 4024587 complement(4523269..4524069) 1 NC_007958.1 DeoR family transcriptional regulator 4524069 4024587 RPD_4070 Rhodopseudomonas palustris BisB5 DeoR family transcriptional regulator YP_571190.1 4523269 R 316057 CDS YP_571191.1 91978532 4024588 complement(4524169..4524786) 1 NC_007958.1 hypothetical protein 4524786 4024588 RPD_4071 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571191.1 4524169 R 316057 CDS YP_571192.1 91978533 4024589 complement(4524803..4525417) 1 NC_007958.1 TetR family transcriptional regulator 4525417 4024589 RPD_4072 Rhodopseudomonas palustris BisB5 TetR family transcriptional regulator YP_571192.1 4524803 R 316057 CDS YP_571193.1 91978534 4024590 complement(4525436..4528576) 1 NC_007958.1 acriflavin resistance protein 4528576 4024590 RPD_4073 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_571193.1 4525436 R 316057 CDS YP_571194.1 91978535 4024591 complement(4528593..4529699) 1 NC_007958.1 secretion protein HlyD 4529699 4024591 RPD_4074 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_571194.1 4528593 R 316057 CDS YP_571195.1 91978536 4024592 complement(4529865..4530089) 1 NC_007958.1 3-demethylubiquinone-9 3-methyltransferase 4530089 4024592 RPD_4075 Rhodopseudomonas palustris BisB5 3-demethylubiquinone-9 3-methyltransferase YP_571195.1 4529865 R 316057 CDS YP_571196.1 91978537 4024593 complement(4530132..4532762) 1 NC_007958.1 multi-sensor hybrid histidine kinase 4532762 4024593 RPD_4076 Rhodopseudomonas palustris BisB5 multi-sensor hybrid histidine kinase YP_571196.1 4530132 R 316057 CDS YP_571197.1 91978538 4024594 4533259..4533474 1 NC_007958.1 CsbD-like protein 4533474 4024594 RPD_4077 Rhodopseudomonas palustris BisB5 CsbD-like protein YP_571197.1 4533259 D 316057 CDS YP_571198.1 91978539 4024595 complement(4533568..4534551) 1 NC_007958.1 D-isomer specific 2-hydroxyacid dehydrogenase 4534551 4024595 RPD_4078 Rhodopseudomonas palustris BisB5 D-isomer specific 2-hydroxyacid dehydrogenase YP_571198.1 4533568 R 316057 CDS YP_571199.1 91978540 4024596 complement(4534672..4536258) 1 NC_007958.1 gamma-glutamyltransferase 4536258 4024596 RPD_4079 Rhodopseudomonas palustris BisB5 gamma-glutamyltransferase YP_571199.1 4534672 R 316057 CDS YP_571200.1 91978541 4024597 4536471..4536686 1 NC_007958.1 SlyX 4536686 4024597 RPD_4080 Rhodopseudomonas palustris BisB5 SlyX YP_571200.1 4536471 D 316057 CDS YP_571201.1 91978542 4024598 complement(4536848..4538386) 1 NC_007958.1 AMP-dependent synthetase and ligase 4538386 4024598 RPD_4081 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_571201.1 4536848 R 316057 CDS YP_571202.1 91978543 4024599 complement(4538705..4539367) 1 NC_007958.1 cyclic nucleotide-binding protein 4539367 4024599 RPD_4082 Rhodopseudomonas palustris BisB5 cyclic nucleotide-binding protein YP_571202.1 4538705 R 316057 CDS YP_571203.1 91978544 4024600 complement(4539607..4540020) 1 NC_007958.1 hypothetical protein 4540020 4024600 RPD_4083 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571203.1 4539607 R 316057 CDS YP_571204.1 91978545 4024601 4540152..4541000 1 NC_007958.1 beta-lactamase-like protein 4541000 4024601 RPD_4084 Rhodopseudomonas palustris BisB5 beta-lactamase-like protein YP_571204.1 4540152 D 316057 CDS YP_571205.1 91978546 4024602 4541110..4541952 1 NC_007958.1 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4541952 4024602 RPD_4085 Rhodopseudomonas palustris BisB5 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_571205.1 4541110 D 316057 CDS YP_571206.1 91978547 4024603 4542034..4542651 1 NC_007958.1 glutathione S-transferase-like protein 4542651 4024603 RPD_4086 Rhodopseudomonas palustris BisB5 glutathione S-transferase-like protein YP_571206.1 4542034 D 316057 CDS YP_571207.1 91978548 4024604 complement(4542716..4543258) 1 NC_007958.1 methylated-DNA--protein-cysteine methyltransferase 4543258 4024604 RPD_4087 Rhodopseudomonas palustris BisB5 methylated-DNA--protein-cysteine methyltransferase YP_571207.1 4542716 R 316057 CDS YP_571208.1 91978549 4024605 complement(4543323..4544432) 1 NC_007958.1 group 1 glycosyl transferase 4544432 4024605 RPD_4088 Rhodopseudomonas palustris BisB5 group 1 glycosyl transferase YP_571208.1 4543323 R 316057 CDS YP_571209.1 91978550 4024606 4544791..4546098 1 NC_007958.1 dihydrodipicolinate reductase 4546098 4024606 RPD_4089 Rhodopseudomonas palustris BisB5 dihydrodipicolinate reductase YP_571209.1 4544791 D 316057 CDS YP_571210.1 91978551 4024607 complement(4546187..4546768) 1 NC_007958.1 hypothetical protein 4546768 4024607 RPD_4090 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571210.1 4546187 R 316057 CDS YP_571211.1 91978552 4024613 4552807..4553331 1 NC_007958.1 hypothetical protein 4553331 4024613 RPD_4091 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571211.1 4552807 D 316057 CDS YP_571212.1 91978553 4024614 4553328..4555373 1 NC_007958.1 peptidase M23B 4555373 4024614 RPD_4092 Rhodopseudomonas palustris BisB5 peptidase M23B YP_571212.1 4553328 D 316057 CDS YP_571213.1 91978554 4024615 complement(4555635..4556498) 1 NC_007958.1 hypothetical protein 4556498 4024615 RPD_4093 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571213.1 4555635 R 316057 CDS YP_571214.1 91978555 4024616 4556743..4556994 1 NC_007958.1 hypothetical protein 4556994 4024616 RPD_4094 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571214.1 4556743 D 316057 CDS YP_571215.1 91978556 4024617 complement(4557064..4559703) 1 NC_007958.1 ATPase 4559703 4024617 RPD_4095 Rhodopseudomonas palustris BisB5 ATPase YP_571215.1 4557064 R 316057 CDS YP_571216.1 91978557 4024618 4559843..4560712 1 NC_007958.1 hypothetical protein 4560712 4024618 RPD_4096 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571216.1 4559843 D 316057 CDS YP_571217.1 91978558 4024619 complement(4560878..4561672) 1 NC_007958.1 hypothetical protein 4561672 4024619 RPD_4097 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571217.1 4560878 R 316057 CDS YP_571218.1 91978559 4024620 complement(4561887..4562579) 1 NC_007958.1 methionine biosynthesis MetW 4562579 4024620 RPD_4098 Rhodopseudomonas palustris BisB5 methionine biosynthesis MetW YP_571218.1 4561887 R 316057 CDS YP_571219.1 91978560 4024621 complement(4562581..4563780) 1 NC_007958.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 4563780 metX 4024621 metX Rhodopseudomonas palustris BisB5 homoserine O-acetyltransferase YP_571219.1 4562581 R 316057 CDS YP_571220.1 91978561 4024622 4564272..4565120 1 NC_007958.1 hypothetical protein 4565120 4024622 RPD_4100 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571220.1 4564272 D 316057 CDS YP_571221.1 91978562 4024623 4565160..4566257 1 NC_007958.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 4566257 4024623 RPD_4101 Rhodopseudomonas palustris BisB5 histidinol-phosphate aminotransferase YP_571221.1 4565160 D 316057 CDS YP_571222.1 91978563 4024624 4566254..4567198 1 NC_007958.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 4567198 4024624 RPD_4102 Rhodopseudomonas palustris BisB5 cyclohexadienyl dehydrogenase YP_571222.1 4566254 D 316057 CDS YP_571223.1 91978564 4024625 complement(4567326..4568231) 1 NC_007958.1 alpha/beta hydrolase fold protein 4568231 4024625 RPD_4103 Rhodopseudomonas palustris BisB5 alpha/beta hydrolase fold protein YP_571223.1 4567326 R 316057 CDS YP_571224.1 91978565 4024626 complement(4568470..4569753) 1 NC_007958.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 4569753 4024626 RPD_4104 Rhodopseudomonas palustris BisB5 phosphoribosylamine--glycine ligase YP_571224.1 4568470 R 316057 CDS YP_571225.1 91978566 4024627 4569989..4571599 1 NC_007958.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 4571599 xseA 4024627 xseA Rhodopseudomonas palustris BisB5 exodeoxyribonuclease VII large subunit YP_571225.1 4569989 D 316057 CDS YP_571226.1 91978567 4024628 complement(4571677..4572504) 1 NC_007958.1 dienelactone hydrolase 4572504 4024628 RPD_4106 Rhodopseudomonas palustris BisB5 dienelactone hydrolase YP_571226.1 4571677 R 316057 CDS YP_571227.1 91978568 4024629 4572696..4572923 1 NC_007958.1 hypothetical protein 4572923 4024629 RPD_4107 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571227.1 4572696 D 316057 CDS YP_571228.1 91978569 4024630 complement(4572968..4573984) 1 NC_007958.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 4573984 lpxK 4024630 lpxK Rhodopseudomonas palustris BisB5 tetraacyldisaccharide 4'-kinase YP_571228.1 4572968 R 316057 CDS YP_571229.1 91978570 4024631 complement(4573977..4575323) 1 NC_007958.1 three-deoxy-D-manno-octulosonic-acid transferase-like protein 4575323 4024631 RPD_4109 Rhodopseudomonas palustris BisB5 three-deoxy-D-manno-octulosonic-acid transferase-like protein YP_571229.1 4573977 R 316057 CDS YP_571230.1 91978571 4024632 complement(4575340..4575585) 1 NC_007958.1 hypothetical protein 4575585 4024632 RPD_4110 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571230.1 4575340 R 316057 CDS YP_571231.1 91978572 4024633 complement(4575621..4576436) 1 NC_007958.1 inositol-1(or 4)-monophosphatase 4576436 4024633 RPD_4111 Rhodopseudomonas palustris BisB5 inositol-1(or 4)-monophosphatase YP_571231.1 4575621 R 316057 CDS YP_571232.1 91978573 4024634 complement(4576423..4577820) 1 NC_007958.1 peptidase U62, modulator of DNA gyrase 4577820 4024634 RPD_4112 Rhodopseudomonas palustris BisB5 peptidase U62, modulator of DNA gyrase YP_571232.1 4576423 R 316057 CDS YP_571233.1 91978574 4024635 4577886..4578641 1 NC_007958.1 hypothetical protein 4578641 4024635 RPD_4113 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571233.1 4577886 D 316057 CDS YP_571234.1 91978575 4024636 complement(4578953..4579903) 1 NC_007958.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 4579903 ubiA 4024636 ubiA Rhodopseudomonas palustris BisB5 4-hydroxybenzoate polyprenyltransferase YP_571234.1 4578953 R 316057 CDS YP_571235.1 91978576 4024637 complement(4579900..4580634) 1 NC_007958.1 hypothetical protein 4580634 4024637 RPD_4115 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571235.1 4579900 R 316057 CDS YP_571236.1 91978577 4024638 4580822..4581577 1 NC_007958.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 4581577 4024638 RPD_4116 Rhodopseudomonas palustris BisB5 16S ribosomal RNA methyltransferase RsmE YP_571236.1 4580822 D 316057 CDS YP_571237.1 91978578 4024639 4581817..4582974 1 NC_007958.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 4582974 hisZ 4024639 hisZ Rhodopseudomonas palustris BisB5 ATP phosphoribosyltransferase regulatory subunit YP_571237.1 4581817 D 316057 CDS YP_571238.1 91978579 4024640 4582971..4583948 1 NC_007958.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 4583948 hisG 4024640 hisG Rhodopseudomonas palustris BisB5 ATP phosphoribosyltransferase YP_571238.1 4582971 D 316057 CDS YP_571239.1 91978580 4024641 4584044..4585087 1 NC_007958.1 glycosyl transferase family protein 4585087 4024641 RPD_4119 Rhodopseudomonas palustris BisB5 glycosyl transferase family protein YP_571239.1 4584044 D 316057 CDS YP_571240.1 91978581 4024642 4585084..4585989 1 NC_007958.1 YdjC-like protein 4585989 4024642 RPD_4120 Rhodopseudomonas palustris BisB5 YdjC-like protein YP_571240.1 4585084 D 316057 CDS YP_571241.1 91978582 4024643 4586088..4586963 1 NC_007958.1 putative periplasmic ligand-binding sensor protein 4586963 4024643 RPD_4121 Rhodopseudomonas palustris BisB5 putative periplasmic ligand-binding sensor protein YP_571241.1 4586088 D 316057 CDS YP_571242.1 91978583 4024644 complement(4587054..4587845) 1 NC_007958.1 hypothetical protein 4587845 4024644 RPD_4122 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571242.1 4587054 R 316057 CDS YP_571243.1 91978584 4024645 4588139..4588912 1 NC_007958.1 hypothetical protein 4588912 4024645 RPD_4123 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571243.1 4588139 D 316057 CDS YP_571244.1 91978585 4024646 complement(4589038..4590246) 1 NC_007958.1 major facilitator transporter 4590246 4024646 RPD_4124 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_571244.1 4589038 R 316057 CDS YP_571245.1 91978586 4024647 complement(4590334..4590873) 1 NC_007958.1 hypothetical protein 4590873 4024647 RPD_4125 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571245.1 4590334 R 316057 CDS YP_571246.1 91978587 4024648 4591148..4591444 1 NC_007958.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 4591444 groES 4024648 groES Rhodopseudomonas palustris BisB5 co-chaperonin GroES YP_571246.1 4591148 D 316057 CDS YP_571247.1 91978588 4024649 4591484..4593136 1 NC_007958.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is not associated with a groES gene; chaperonin GroEL 4593136 groEL 4024649 groEL Rhodopseudomonas palustris BisB5 chaperonin GroEL YP_571247.1 4591484 D 316057 CDS YP_571248.1 91978589 4024650 4593295..4594485 1 NC_007958.1 hypothetical protein 4594485 4024650 RPD_4128 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571248.1 4593295 D 316057 CDS YP_571249.1 91978590 4024651 4594602..4596116 1 NC_007958.1 FAD dependent oxidoreductase 4596116 4024651 RPD_4129 Rhodopseudomonas palustris BisB5 FAD dependent oxidoreductase YP_571249.1 4594602 D 316057 CDS YP_571250.1 91978591 4024652 complement(4596267..4596680) 1 NC_007958.1 hypothetical protein 4596680 4024652 RPD_4130 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571250.1 4596267 R 316057 CDS YP_571251.1 91978592 4024653 complement(4596873..4598537) 1 NC_007958.1 L-lactate transport 4598537 4024653 RPD_4131 Rhodopseudomonas palustris BisB5 L-lactate transport YP_571251.1 4596873 R 316057 CDS YP_571252.1 91978593 4024654 4598660..4600552 1 NC_007958.1 ABC transporter-like protein 4600552 4024654 RPD_4132 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571252.1 4598660 D 316057 CDS YP_571253.1 91978594 4024655 complement(4600815..4601813) 1 NC_007958.1 hypothetical protein 4601813 4024655 RPD_4133 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571253.1 4600815 R 316057 CDS YP_571254.1 91978595 4024656 complement(4602271..4603275) 1 NC_007958.1 hypothetical protein 4603275 4024656 RPD_4134 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571254.1 4602271 R 316057 CDS YP_571255.1 91978596 4024657 complement(4603347..4604660) 1 NC_007958.1 hypothetical protein 4604660 4024657 RPD_4135 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571255.1 4603347 R 316057 CDS YP_571256.1 91978597 4024658 complement(4604657..4605898) 1 NC_007958.1 FAD linked oxidase-like protein 4605898 4024658 RPD_4136 Rhodopseudomonas palustris BisB5 FAD linked oxidase-like protein YP_571256.1 4604657 R 316057 CDS YP_571257.1 91978598 4024659 complement(4605919..4607412) 1 NC_007958.1 D-lactate dehydrogenase (cytochrome) 4607412 4024659 RPD_4137 Rhodopseudomonas palustris BisB5 D-lactate dehydrogenase (cytochrome) YP_571257.1 4605919 R 316057 CDS YP_571258.1 91978599 4024660 complement(4607454..4608128) 1 NC_007958.1 TetR family transcriptional regulator 4608128 4024660 RPD_4138 Rhodopseudomonas palustris BisB5 TetR family transcriptional regulator YP_571258.1 4607454 R 316057 CDS YP_571259.1 91978600 4024661 complement(4608423..4608740) 1 NC_007958.1 branched-chain amino acid transport 4608740 4024661 RPD_4139 Rhodopseudomonas palustris BisB5 branched-chain amino acid transport YP_571259.1 4608423 R 316057 CDS YP_571260.1 91978601 4024662 complement(4608737..4609474) 1 NC_007958.1 AzlC-like protein 4609474 4024662 RPD_4140 Rhodopseudomonas palustris BisB5 AzlC-like protein YP_571260.1 4608737 R 316057 CDS YP_571261.1 91978602 4024663 complement(4609730..4611646) 1 NC_007958.1 ATP-dependent metalloprotease FtsH 4611646 4024663 RPD_4141 Rhodopseudomonas palustris BisB5 ATP-dependent metalloprotease FtsH YP_571261.1 4609730 R 316057 CDS YP_571262.1 91978603 4024664 complement(4611860..4612903) 1 NC_007958.1 tRNA(Ile)-lysidine synthetase-like protein 4612903 4024664 RPD_4142 Rhodopseudomonas palustris BisB5 tRNA(Ile)-lysidine synthetase-like protein YP_571262.1 4611860 R 316057 CDS YP_571263.1 91978604 4024665 complement(4613007..4614044) 1 NC_007958.1 hypothetical protein 4614044 4024665 RPD_4143 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571263.1 4613007 R 316057 CDS YP_571264.1 91978605 4024666 complement(4614305..4614802) 1 NC_007958.1 OmpA/MotB 4614802 4024666 RPD_4144 Rhodopseudomonas palustris BisB5 OmpA/MotB YP_571264.1 4614305 R 316057 CDS YP_571265.1 91978606 4024667 complement(4615145..4615903) 1 NC_007958.1 hypothetical protein 4615903 4024667 RPD_4145 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571265.1 4615145 R 316057 CDS YP_571266.1 91978607 4024668 complement(4616064..4618397) 1 NC_007958.1 GGDEF domain-containing protein 4618397 4024668 RPD_4146 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_571266.1 4616064 R 316057 CDS YP_571267.1 91978608 4024669 complement(4618605..4619954) 1 NC_007958.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 4619954 tolB 4024669 tolB Rhodopseudomonas palustris BisB5 translocation protein TolB YP_571267.1 4618605 R 316057 CDS YP_571268.1 91978609 4024670 complement(4620012..4620989) 1 NC_007958.1 putative TolA 4620989 4024670 RPD_4148 Rhodopseudomonas palustris BisB5 putative TolA YP_571268.1 4620012 R 316057 CDS YP_571269.1 91978610 4024671 complement(4621046..4621516) 1 NC_007958.1 biopolymer transport protein ExbD/TolR 4621516 4024671 RPD_4149 Rhodopseudomonas palustris BisB5 biopolymer transport protein ExbD/TolR YP_571269.1 4621046 R 316057 CDS YP_571270.1 91978611 4024672 complement(4621554..4622237) 1 NC_007958.1 MotA/TolQ/ExbB proton channel 4622237 4024672 RPD_4150 Rhodopseudomonas palustris BisB5 MotA/TolQ/ExbB proton channel YP_571270.1 4621554 R 316057 CDS YP_571271.1 91978612 4024673 complement(4622568..4622894) 1 NC_007958.1 RNA polymerase ECF-type sigma factor 4622894 4024673 RPD_4151 Rhodopseudomonas palustris BisB5 RNA polymerase ECF-type sigma factor YP_571271.1 4622568 R 316057 CDS YP_571272.1 91978613 4024674 complement(4622900..4623172) 1 NC_007958.1 alkylhydroperoxidase AhpD core 4623172 4024674 RPD_4152 Rhodopseudomonas palustris BisB5 alkylhydroperoxidase AhpD core YP_571272.1 4622900 R 316057 CDS YP_571273.1 91978614 4024675 complement(4623330..4623800) 1 NC_007958.1 hypothetical protein 4623800 4024675 RPD_4153 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571273.1 4623330 R 316057 CDS YP_571274.1 91978615 4024676 complement(4623945..4624649) 1 NC_007958.1 TetR family transcriptional regulator 4624649 4024676 RPD_4154 Rhodopseudomonas palustris BisB5 TetR family transcriptional regulator YP_571274.1 4623945 R 316057 CDS YP_571275.1 91978616 4024677 complement(4624884..4625303) 1 NC_007958.1 hypothetical protein 4625303 4024677 RPD_4155 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571275.1 4624884 R 316057 CDS YP_571276.1 91978617 4024678 4625728..4625883 1 NC_007958.1 hypothetical protein 4625883 4024678 RPD_4156 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571276.1 4625728 D 316057 CDS YP_571277.1 91978618 4024679 complement(4626029..4626205) 1 NC_007958.1 hypothetical protein 4626205 4024679 RPD_4157 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571277.1 4626029 R 316057 CDS YP_571278.1 91978619 4024680 4626489..4627277 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 4627277 4024680 RPD_4158 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_571278.1 4626489 D 316057 CDS YP_571279.1 91978620 4024681 complement(4627492..4627902) 1 NC_007958.1 glyoxalase/bleomycin resistance protein/dioxygenase 4627902 4024681 RPD_4159 Rhodopseudomonas palustris BisB5 glyoxalase/bleomycin resistance protein/dioxygenase YP_571279.1 4627492 R 316057 CDS YP_571280.1 91978621 4024682 complement(4627937..4629196) 1 NC_007958.1 sigma-70 region 2 4629196 4024682 RPD_4160 Rhodopseudomonas palustris BisB5 sigma-70 region 2 YP_571280.1 4627937 R 316057 CDS YP_571281.1 91978622 4024683 complement(4629193..4629564) 1 NC_007958.1 hypothetical protein 4629564 4024683 RPD_4161 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571281.1 4629193 R 316057 CDS YP_571282.1 91978623 4024684 complement(4629718..4630143) 1 NC_007958.1 glyoxalase/bleomycin resistance protein/dioxygenase 4630143 4024684 RPD_4162 Rhodopseudomonas palustris BisB5 glyoxalase/bleomycin resistance protein/dioxygenase YP_571282.1 4629718 R 316057 CDS YP_571283.1 91978624 4024685 complement(4630460..4631716) 1 NC_007958.1 putative OpgC protein, require for succinylation of osmoregulated periplasmic glucans 4631716 4024685 RPD_4163 Rhodopseudomonas palustris BisB5 putative OpgC protein, require for succinylation of osmoregulated periplasmic glucans YP_571283.1 4630460 R 316057 CDS YP_571284.1 91978625 4024686 complement(4632011..4633324) 1 NC_007958.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4633324 4024686 RPD_4164 Rhodopseudomonas palustris BisB5 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_571284.1 4632011 R 316057 CDS YP_571285.1 91978626 4024687 complement(4633413..4633874) 1 NC_007958.1 4-hydroxybenzoyl-CoA thioesterase 4633874 4024687 RPD_4165 Rhodopseudomonas palustris BisB5 4-hydroxybenzoyl-CoA thioesterase YP_571285.1 4633413 R 316057 CDS YP_571286.1 91978627 4024688 complement(4634049..4634339) 1 NC_007958.1 plasmid stabilization system protein 4634339 4024688 RPD_4166 Rhodopseudomonas palustris BisB5 plasmid stabilization system protein YP_571286.1 4634049 R 316057 CDS YP_571287.1 91978628 4024689 complement(4634688..4635770) 1 NC_007958.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 4635770 ruvB 4024689 ruvB Rhodopseudomonas palustris BisB5 Holliday junction DNA helicase RuvB YP_571287.1 4634688 R 316057 CDS YP_571288.1 91978629 4024690 complement(4636008..4636436) 1 NC_007958.1 hypothetical protein 4636436 4024690 RPD_4168 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571288.1 4636008 R 316057 CDS YP_571289.1 91978630 4024691 complement(4636433..4637050) 1 NC_007958.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 4637050 ruvA 4024691 ruvA Rhodopseudomonas palustris BisB5 Holliday junction DNA helicase RuvA YP_571289.1 4636433 R 316057 CDS YP_571290.1 91978631 4024692 complement(4637208..4637906) 1 NC_007958.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 4637906 ruvC 4024692 ruvC Rhodopseudomonas palustris BisB5 Holliday junction resolvase YP_571290.1 4637208 R 316057 CDS YP_571291.1 91978632 4024693 complement(4637966..4638712) 1 NC_007958.1 hypothetical protein 4638712 4024693 RPD_4171 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571291.1 4637966 R 316057 CDS YP_571292.1 91978633 4024694 4638903..4640657 1 NC_007958.1 methyl-accepting chemotaxis sensory transducer 4640657 4024694 RPD_4172 Rhodopseudomonas palustris BisB5 methyl-accepting chemotaxis sensory transducer YP_571292.1 4638903 D 316057 CDS YP_571293.1 91978634 4024696 4643064..4644683 1 NC_007958.1 hypothetical protein 4644683 4024696 RPD_4175 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571293.1 4643064 D 316057 CDS YP_571294.1 91978635 4024697 4644673..4645920 1 NC_007958.1 hypothetical protein 4645920 4024697 RPD_4176 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571294.1 4644673 D 316057 CDS YP_571295.1 91978636 4024698 4645926..4647380 1 NC_007958.1 pyridoxal-dependent decarboxylase 4647380 4024698 RPD_4177 Rhodopseudomonas palustris BisB5 pyridoxal-dependent decarboxylase YP_571295.1 4645926 D 316057 CDS YP_571296.1 91978637 4024699 4647488..4648462 1 NC_007958.1 hypothetical protein 4648462 4024699 RPD_4178 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571296.1 4647488 D 316057 CDS YP_571297.1 91978638 4024700 complement(4648581..4649405) 1 NC_007958.1 hypothetical protein 4649405 4024700 RPD_4179 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571297.1 4648581 R 316057 CDS YP_571298.1 91978639 4024701 complement(4649408..4649995) 1 NC_007958.1 5-formyltetrahydrofolate cyclo-ligase 4649995 4024701 RPD_4180 Rhodopseudomonas palustris BisB5 5-formyltetrahydrofolate cyclo-ligase YP_571298.1 4649408 R 316057 CDS YP_571299.1 91978640 4024702 4650416..4650874 1 NC_007958.1 hypothetical protein 4650874 4024702 RPD_4181 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571299.1 4650416 D 316057 CDS YP_571300.1 91978641 4024703 complement(4650983..4651318) 1 NC_007958.1 transcriptional regulator 4651318 4024703 RPD_4182 Rhodopseudomonas palustris BisB5 transcriptional regulator YP_571300.1 4650983 R 316057 CDS YP_571301.1 91978642 4024704 complement(4651296..4651682) 1 NC_007958.1 hypothetical protein 4651682 4024704 RPD_4183 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571301.1 4651296 R 316057 CDS YP_571302.1 91978643 4024705 4652069..4652623 1 NC_007958.1 hypothetical protein 4652623 4024705 RPD_4184 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571302.1 4652069 D 316057 CDS YP_571303.1 91978644 4024706 complement(4652783..4653175) 1 NC_007958.1 rhodanese-like protein 4653175 4024706 RPD_4185 Rhodopseudomonas palustris BisB5 rhodanese-like protein YP_571303.1 4652783 R 316057 CDS YP_571304.1 91978645 4024707 complement(4653199..4653675) 1 NC_007958.1 isoprenylcysteine carboxyl methyltransferase 4653675 4024707 RPD_4186 Rhodopseudomonas palustris BisB5 isoprenylcysteine carboxyl methyltransferase YP_571304.1 4653199 R 316057 CDS YP_571305.1 91978646 4024708 complement(4653769..4654074) 1 NC_007958.1 hypothetical protein 4654074 4024708 RPD_4187 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571305.1 4653769 R 316057 CDS YP_571306.1 91978647 4024709 complement(4654071..4657151) 1 NC_007958.1 heavy metal efflux pump CzcA 4657151 4024709 RPD_4188 Rhodopseudomonas palustris BisB5 heavy metal efflux pump CzcA YP_571306.1 4654071 R 316057 CDS YP_571307.1 91978648 4024710 complement(4657152..4658450) 1 NC_007958.1 secretion protein HlyD 4658450 4024710 RPD_4189 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_571307.1 4657152 R 316057 CDS YP_571308.1 91978649 4024711 4658463..4658729 1 NC_007958.1 hypothetical protein 4658729 4024711 RPD_4190 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571308.1 4658463 D 316057 CDS YP_571309.1 91978650 4024712 complement(4658870..4659217) 1 NC_007958.1 cytochrome b5 4659217 4024712 RPD_4191 Rhodopseudomonas palustris BisB5 cytochrome b5 YP_571309.1 4658870 R 316057 CDS YP_571310.1 91978651 4024713 complement(4659232..4660497) 1 NC_007958.1 ferric reductase transmembrane component-like protein 4660497 4024713 RPD_4192 Rhodopseudomonas palustris BisB5 ferric reductase transmembrane component-like protein YP_571310.1 4659232 R 316057 CDS YP_571311.1 91978652 4024714 complement(4660502..4660831) 1 NC_007958.1 hypothetical protein 4660831 4024714 RPD_4193 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571311.1 4660502 R 316057 CDS YP_571312.1 91978653 4024715 complement(4661081..4662103) 1 NC_007958.1 cysteine synthase 4662103 4024715 RPD_4194 Rhodopseudomonas palustris BisB5 cysteine synthase YP_571312.1 4661081 R 316057 CDS YP_571313.1 91978654 4024716 complement(4662113..4663099) 1 NC_007958.1 hypothetical protein 4663099 4024716 RPD_4195 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571313.1 4662113 R 316057 CDS YP_571314.1 91978655 4024717 complement(4663103..4663984) 1 NC_007958.1 hypothetical protein 4663984 4024717 RPD_4196 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571314.1 4663103 R 316057 CDS YP_571315.1 91978656 4024718 4664090..4665049 1 NC_007958.1 LysR, substrate-binding 4665049 4024718 RPD_4197 Rhodopseudomonas palustris BisB5 LysR, substrate-binding YP_571315.1 4664090 D 316057 CDS YP_571316.1 91978657 4024719 complement(4665093..4665803) 1 NC_007958.1 DSBA oxidoreductase 4665803 4024719 RPD_4198 Rhodopseudomonas palustris BisB5 DSBA oxidoreductase YP_571316.1 4665093 R 316057 CDS YP_571317.1 91978658 4024720 complement(4665800..4669027) 1 NC_007958.1 acriflavin resistance protein 4669027 4024720 RPD_4199 Rhodopseudomonas palustris BisB5 acriflavin resistance protein YP_571317.1 4665800 R 316057 CDS YP_571318.1 91978659 4024721 complement(4669024..4670025) 1 NC_007958.1 secretion protein HlyD 4670025 4024721 RPD_4200 Rhodopseudomonas palustris BisB5 secretion protein HlyD YP_571318.1 4669024 R 316057 CDS YP_571319.1 91978660 4024722 complement(4670027..4670347) 1 NC_007958.1 regulatory protein ArsR 4670347 4024722 RPD_4201 Rhodopseudomonas palustris BisB5 regulatory protein ArsR YP_571319.1 4670027 R 316057 CDS YP_571320.1 91978661 4024723 4670456..4670659 1 NC_007958.1 hypothetical protein 4670659 4024723 RPD_4202 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571320.1 4670456 D 316057 CDS YP_571321.1 91978662 4024724 complement(4670854..4671294) 1 NC_007958.1 nitrogen fixation-like protein 4671294 4024724 RPD_4203 Rhodopseudomonas palustris BisB5 nitrogen fixation-like protein YP_571321.1 4670854 R 316057 CDS YP_571322.1 91978663 4024725 complement(4671412..4671945) 1 NC_007958.1 ubiquinol-cytochrome c reductase, iron-sulfur subunit 4671945 4024725 RPD_4204 Rhodopseudomonas palustris BisB5 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_571322.1 4671412 R 316057 CDS YP_571323.1 91978664 4024726 complement(4672028..4672621) 1 NC_007958.1 transcriptional regulator PadR-like 4672621 4024726 RPD_4205 Rhodopseudomonas palustris BisB5 transcriptional regulator PadR-like YP_571323.1 4672028 R 316057 CDS YP_571324.1 91978665 4024727 4673023..4673223 1 NC_007958.1 hypothetical protein 4673223 4024727 RPD_4206 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571324.1 4673023 D 316057 CDS YP_571325.1 91978666 4024728 complement(4673310..4674077) 1 NC_007958.1 hypothetical protein 4674077 4024728 RPD_4207 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571325.1 4673310 R 316057 CDS YP_571326.1 91978667 4024729 4674385..4674936 1 NC_007958.1 hypothetical protein 4674936 4024729 RPD_4208 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571326.1 4674385 D 316057 CDS YP_571327.1 91978668 4024730 4675090..4676283 1 NC_007958.1 peptidase M48, Ste24p 4676283 4024730 RPD_4209 Rhodopseudomonas palustris BisB5 peptidase M48, Ste24p YP_571327.1 4675090 D 316057 CDS YP_571328.1 91978669 4024731 4676457..4677230 1 NC_007958.1 hypothetical protein 4677230 4024731 RPD_4210 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571328.1 4676457 D 316057 CDS YP_571329.1 91978670 4024732 4677384..4678097 1 NC_007958.1 hypothetical protein 4678097 4024732 RPD_4211 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571329.1 4677384 D 316057 CDS YP_571330.1 91978671 4024733 complement(4678267..4678812) 1 NC_007958.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 4678812 4024733 RPD_4212 Rhodopseudomonas palustris BisB5 adenine phosphoribosyltransferase YP_571330.1 4678267 R 316057 CDS YP_571331.1 91978672 4024734 complement(4678953..4681115) 1 NC_007958.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; anthranilate synthase 4681115 4024734 RPD_4213 Rhodopseudomonas palustris BisB5 anthranilate synthase YP_571331.1 4678953 R 316057 CDS YP_571332.1 91978673 4024735 4681439..4681645 1 NC_007958.1 hypothetical protein 4681645 4024735 RPD_4214 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571332.1 4681439 D 316057 CDS YP_571333.1 91978674 4024736 complement(4681667..4682293) 1 NC_007958.1 type 12 methyltransferase 4682293 4024736 RPD_4215 Rhodopseudomonas palustris BisB5 type 12 methyltransferase YP_571333.1 4681667 R 316057 CDS YP_571334.1 91978675 4024737 complement(4682317..4683726) 1 NC_007958.1 hypothetical protein 4683726 4024737 RPD_4216 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571334.1 4682317 R 316057 CDS YP_571335.1 91978676 4024738 4684132..4684308 1 NC_007958.1 hypothetical protein 4684308 4024738 RPD_4217 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571335.1 4684132 D 316057 CDS YP_571336.1 91978677 4024739 complement(4684438..4684656) 1 NC_007958.1 PhnA protein 4684656 4024739 RPD_4218 Rhodopseudomonas palustris BisB5 PhnA protein YP_571336.1 4684438 R 316057 CDS YP_571337.1 91978678 4024740 complement(4684794..4685483) 1 NC_007958.1 OmpW 4685483 4024740 RPD_4219 Rhodopseudomonas palustris BisB5 OmpW YP_571337.1 4684794 R 316057 CDS YP_571338.1 91978679 4024741 complement(4685704..4685964) 1 NC_007958.1 hypothetical protein 4685964 4024741 RPD_4220 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571338.1 4685704 R 316057 CDS YP_571339.1 91978680 4024742 complement(4686158..4688068) 1 NC_007958.1 AMP-dependent synthetase and ligase 4688068 4024742 RPD_4221 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_571339.1 4686158 R 316057 CDS YP_571340.1 91978681 4024743 complement(4688242..4689006) 1 NC_007958.1 hypothetical protein 4689006 4024743 RPD_4222 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571340.1 4688242 R 316057 CDS YP_571341.1 91978682 4024744 complement(4689160..4689963) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 4689963 4024744 RPD_4223 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_571341.1 4689160 R 316057 CDS YP_571342.1 91978683 4024745 complement(4690277..4690651) 1 NC_007958.1 hypothetical protein 4690651 4024745 RPD_4224 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571342.1 4690277 R 316057 CDS YP_571343.1 91978684 4024746 complement(4690648..4692768) 1 NC_007958.1 TRAP transporter, 4TM/12TM fusion protein 4692768 4024746 RPD_4225 Rhodopseudomonas palustris BisB5 TRAP transporter, 4TM/12TM fusion protein YP_571343.1 4690648 R 316057 CDS YP_571344.1 91978685 4024747 complement(4692917..4693870) 1 NC_007958.1 TRAP transporter solute receptor TAXI family protein 4693870 4024747 RPD_4226 Rhodopseudomonas palustris BisB5 TRAP transporter solute receptor TAXI family protein YP_571344.1 4692917 R 316057 CDS YP_571345.1 91978686 4024748 4694026..4695303 1 NC_007958.1 major facilitator transporter 4695303 4024748 RPD_4227 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_571345.1 4694026 D 316057 CDS YP_571346.1 91978687 4024749 4695402..4697009 1 NC_007958.1 twin-arginine translocation pathway signal 4697009 4024749 RPD_4228 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_571346.1 4695402 D 316057 CDS YP_571347.1 91978688 4024750 4697380..4698387 1 NC_007958.1 twin-arginine translocation pathway signal 4698387 4024750 RPD_4229 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_571347.1 4697380 D 316057 CDS YP_571348.1 91978689 4024751 4698651..4699868 1 NC_007958.1 putative cylclic diguanylate phosphodiesterase 4699868 4024751 RPD_4230 Rhodopseudomonas palustris BisB5 putative cylclic diguanylate phosphodiesterase YP_571348.1 4698651 D 316057 CDS YP_571349.1 91978690 4024752 complement(4700003..4700704) 1 NC_007958.1 hypothetical protein 4700704 4024752 RPD_4231 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571349.1 4700003 R 316057 CDS YP_571350.1 91978691 4024753 4700832..4701137 1 NC_007958.1 hypothetical protein 4701137 4024753 RPD_4232 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571350.1 4700832 D 316057 CDS YP_571351.1 91978692 4024754 complement(4701164..4702384) 1 NC_007958.1 hypothetical protein 4702384 4024754 RPD_4233 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571351.1 4701164 R 316057 CDS YP_571352.1 91978693 4024755 complement(4702474..4703100) 1 NC_007958.1 NUDIX hydrolase 4703100 4024755 RPD_4234 Rhodopseudomonas palustris BisB5 NUDIX hydrolase YP_571352.1 4702474 R 316057 CDS YP_571353.1 91978694 4024756 4703176..4703595 1 NC_007958.1 thioesterase superfamily protein 4703595 4024756 RPD_4235 Rhodopseudomonas palustris BisB5 thioesterase superfamily protein YP_571353.1 4703176 D 316057 CDS YP_571354.1 91978695 4024757 complement(4703609..4704874) 1 NC_007958.1 hypothetical protein 4704874 4024757 RPD_4236 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571354.1 4703609 R 316057 CDS YP_571355.1 91978696 4024758 complement(4704959..4705705) 1 NC_007958.1 HAD family hydrolase 4705705 4024758 RPD_4237 Rhodopseudomonas palustris BisB5 HAD family hydrolase YP_571355.1 4704959 R 316057 CDS YP_571356.1 91978697 4024759 complement(4706117..4707376) 1 NC_007958.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase 4707376 4024759 RPD_4238 Rhodopseudomonas palustris BisB5 adenosylmethionine--8-amino-7-oxononanoate transaminase YP_571356.1 4706117 R 316057 CDS YP_571357.1 91978698 4024760 complement(4707376..4708014) 1 NC_007958.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 4708014 bioD 4024760 bioD Rhodopseudomonas palustris BisB5 dithiobiotin synthetase YP_571357.1 4707376 R 316057 CDS YP_571358.1 91978699 4024761 complement(4708011..4709237) 1 NC_007958.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 4709237 4024761 RPD_4240 Rhodopseudomonas palustris BisB5 8-amino-7-oxononanoate synthase YP_571358.1 4708011 R 316057 CDS YP_571359.1 91978700 4024762 4709400..4709933 1 NC_007958.1 hypothetical protein 4709933 4024762 RPD_4241 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571359.1 4709400 D 316057 CDS YP_571360.1 91978701 4024763 complement(4709984..4711375) 1 NC_007958.1 ATPase-like ATP-binding protein 4711375 4024763 RPD_4242 Rhodopseudomonas palustris BisB5 ATPase-like ATP-binding protein YP_571360.1 4709984 R 316057 CDS YP_571361.1 91978702 4024764 complement(4711372..4712031) 1 NC_007958.1 response regulator receiver 4712031 4024764 RPD_4243 Rhodopseudomonas palustris BisB5 response regulator receiver YP_571361.1 4711372 R 316057 CDS YP_571362.1 91978703 4024765 4712135..4713937 1 NC_007958.1 protein-disulfide reductase 4713937 4024765 RPD_4244 Rhodopseudomonas palustris BisB5 protein-disulfide reductase YP_571362.1 4712135 D 316057 CDS YP_571363.1 91978704 4024766 4713964..4714596 1 NC_007958.1 DSBA oxidoreductase 4714596 4024766 RPD_4245 Rhodopseudomonas palustris BisB5 DSBA oxidoreductase YP_571363.1 4713964 D 316057 CDS YP_571364.1 91978705 4024767 4714602..4715276 1 NC_007958.1 hypothetical protein 4715276 4024767 RPD_4246 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571364.1 4714602 D 316057 CDS YP_571365.1 91978706 4024768 complement(4715292..4716650) 1 NC_007958.1 twin-arginine translocation pathway signal 4716650 4024768 RPD_4247 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_571365.1 4715292 R 316057 CDS YP_571366.1 91978707 4024769 complement(4716619..4717881) 1 NC_007958.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4717881 4024769 RPD_4248 Rhodopseudomonas palustris BisB5 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_571366.1 4716619 R 316057 CDS YP_571367.1 91978708 4024770 complement(4717878..4718324) 1 NC_007958.1 putative cytochrome subunit of sulfide dehydrogenase 4718324 4024770 RPD_4249 Rhodopseudomonas palustris BisB5 putative cytochrome subunit of sulfide dehydrogenase YP_571367.1 4717878 R 316057 CDS YP_571368.1 91978709 4024771 complement(4718369..4719460) 1 NC_007958.1 hypothetical protein 4719460 4024771 RPD_4250 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571368.1 4718369 R 316057 CDS YP_571369.1 91978710 4024772 complement(4719644..4720372) 1 NC_007958.1 putative cytochrome 4720372 4024772 RPD_4251 Rhodopseudomonas palustris BisB5 putative cytochrome YP_571369.1 4719644 R 316057 CDS YP_571370.1 91978711 4024773 complement(4720356..4721633) 1 NC_007958.1 twin-arginine translocation pathway signal 4721633 4024773 RPD_4252 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_571370.1 4720356 R 316057 CDS YP_571371.1 91978712 4024774 complement(4721690..4723387) 1 NC_007958.1 twin-arginine translocation pathway signal 4723387 4024774 RPD_4253 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_571371.1 4721690 R 316057 CDS YP_571372.1 91978713 4024775 complement(4723533..4723862) 1 NC_007958.1 putative sulfur oxidation protein SoxZ 4723862 4024775 RPD_4254 Rhodopseudomonas palustris BisB5 putative sulfur oxidation protein SoxZ YP_571372.1 4723533 R 316057 CDS YP_571373.1 91978714 4024776 complement(4723904..4724368) 1 NC_007958.1 with SoxZ catalyzes the oxidation of sulfur compounds; sulfur oxidation protein SoxY 4724368 4024776 RPD_4255 Rhodopseudomonas palustris BisB5 sulfur oxidation protein SoxY YP_571373.1 4723904 R 316057 CDS YP_571374.1 91978715 4024777 4724545..4725363 1 NC_007958.1 hypothetical protein 4725363 4024777 RPD_4256 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571374.1 4724545 D 316057 CDS YP_571375.1 91978716 4024778 4725377..4726147 1 NC_007958.1 hypothetical protein 4726147 4024778 RPD_4257 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571375.1 4725377 D 316057 CDS YP_571376.1 91978717 4024779 4726175..4726681 1 NC_007958.1 hypothetical protein 4726681 4024779 RPD_4258 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571376.1 4726175 D 316057 CDS YP_571377.1 91978718 4024780 complement(4726820..4727410) 1 NC_007958.1 hypothetical protein 4727410 4024780 RPD_4259 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571377.1 4726820 R 316057 CDS YP_571378.1 91978719 4024781 complement(4727434..4728177) 1 NC_007958.1 cytochrome c biogenesis protein, transmembrane region 4728177 4024781 RPD_4260 Rhodopseudomonas palustris BisB5 cytochrome c biogenesis protein, transmembrane region YP_571378.1 4727434 R 316057 CDS YP_571379.1 91978720 4024782 4728218..4728649 1 NC_007958.1 hypothetical protein 4728649 4024782 RPD_4261 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571379.1 4728218 D 316057 CDS YP_571380.1 91978721 4024783 4728655..4729032 1 NC_007958.1 ArsR family transcriptional regulator 4729032 4024783 RPD_4262 Rhodopseudomonas palustris BisB5 ArsR family transcriptional regulator YP_571380.1 4728655 D 316057 CDS YP_571381.1 91978722 4024784 4729102..4730304 1 NC_007958.1 hypothetical protein 4730304 4024784 RPD_4263 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571381.1 4729102 D 316057 CDS YP_571382.1 91978723 4024785 complement(4730219..4730671) 1 NC_007958.1 hypothetical protein 4730671 4024785 RPD_4264 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571382.1 4730219 R 316057 CDS YP_571383.1 91978724 4024786 4731063..4731563 1 NC_007958.1 hypothetical protein 4731563 4024786 RPD_4265 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571383.1 4731063 D 316057 CDS YP_571384.1 91978725 4024787 4731628..4731921 1 NC_007958.1 hypothetical protein 4731921 4024787 RPD_4266 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571384.1 4731628 D 316057 CDS YP_571385.1 91978726 4024788 4731930..4733396 1 NC_007958.1 copper tolerance protein 4733396 4024788 RPD_4267 Rhodopseudomonas palustris BisB5 copper tolerance protein YP_571385.1 4731930 D 316057 CDS YP_571386.1 91978727 4024789 4733410..4734789 1 NC_007958.1 twin-arginine translocation pathway signal 4734789 4024789 RPD_4268 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_571386.1 4733410 D 316057 CDS YP_571387.1 91978728 4024790 4734840..4735325 1 NC_007958.1 blue (type1) copper domain-containing protein 4735325 4024790 RPD_4269 Rhodopseudomonas palustris BisB5 blue (type1) copper domain-containing protein YP_571387.1 4734840 D 316057 CDS YP_571388.1 91978729 4024791 4735348..4735647 1 NC_007958.1 hypothetical protein 4735647 4024791 RPD_4270 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571388.1 4735348 D 316057 CDS YP_571389.1 91978730 4024792 4735773..4736141 1 NC_007958.1 copper resistance protein CopC 4736141 4024792 RPD_4271 Rhodopseudomonas palustris BisB5 copper resistance protein CopC YP_571389.1 4735773 D 316057 CDS YP_571390.1 91978731 4024793 4736141..4737073 1 NC_007958.1 copper resistance D 4737073 4024793 RPD_4272 Rhodopseudomonas palustris BisB5 copper resistance D YP_571390.1 4736141 D 316057 CDS YP_571391.1 91978732 4024794 complement(4737121..4737363) 1 NC_007958.1 hypothetical protein 4737363 4024794 RPD_4273 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571391.1 4737121 R 316057 CDS YP_571392.1 91978733 4024795 complement(4737622..4738254) 1 NC_007958.1 hypothetical protein 4738254 4024795 RPD_4274 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571392.1 4737622 R 316057 CDS YP_571393.1 91978734 4024796 complement(4738251..4738802) 1 NC_007958.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 4738802 4024796 RPD_4275 Rhodopseudomonas palustris BisB5 RNA polymerase sigma factor YP_571393.1 4738251 R 316057 CDS YP_571394.1 91978735 4024798 complement(4739792..4740415) 1 NC_007958.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 4740415 4024798 RPD_4276 Rhodopseudomonas palustris BisB5 Maf-like protein YP_571394.1 4739792 R 316057 CDS YP_571395.1 91978736 4024799 complement(4740774..4741223) 1 NC_007958.1 protein tyrosine phosphatase 4741223 4024799 RPD_4277 Rhodopseudomonas palustris BisB5 protein tyrosine phosphatase YP_571395.1 4740774 R 316057 CDS YP_571396.1 91978737 4024800 complement(4741352..4741843) 1 NC_007958.1 hypothetical protein 4741843 4024800 RPD_4278 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571396.1 4741352 R 316057 CDS YP_571397.1 91978738 4024801 complement(4741840..4743165) 1 NC_007958.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 4743165 hisD 4024801 hisD Rhodopseudomonas palustris BisB5 histidinol dehydrogenase YP_571397.1 4741840 R 316057 CDS YP_571398.1 91978739 4024802 complement(4743273..4743719) 1 NC_007958.1 hypothetical protein 4743719 4024802 RPD_4280 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571398.1 4743273 R 316057 CDS YP_571399.1 91978740 4024803 complement(4743740..4745029) 1 NC_007958.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4745029 4024803 RPD_4281 Rhodopseudomonas palustris BisB5 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_571399.1 4743740 R 316057 CDS YP_571400.1 91978741 4024804 complement(4745198..4745488) 1 NC_007958.1 hypothetical protein 4745488 4024804 RPD_4282 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571400.1 4745198 R 316057 CDS YP_571401.1 91978742 4024805 4745740..4746033 1 NC_007958.1 hypothetical protein 4746033 4024805 RPD_4283 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571401.1 4745740 D 316057 CDS YP_571402.1 91978743 4024806 complement(4746265..4746525) 1 NC_007958.1 hypothetical protein 4746525 4024806 RPD_4284 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571402.1 4746265 R 316057 CDS YP_571403.1 91978744 4024807 4746543..4746989 1 NC_007958.1 hypothetical protein 4746989 4024807 RPD_4285 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571403.1 4746543 D 316057 CDS YP_571404.1 91978745 4024809 complement(4747345..4748745) 1 NC_007958.1 amidase 4748745 4024809 RPD_4286 Rhodopseudomonas palustris BisB5 amidase YP_571404.1 4747345 R 316057 CDS YP_571405.1 91978746 4024810 complement(4748831..4749592) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 4749592 4024810 RPD_4287 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_571405.1 4748831 R 316057 CDS YP_571406.1 91978747 4024811 complement(4749678..4750403) 1 NC_007958.1 ABC transporter-like protein 4750403 4024811 RPD_4288 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571406.1 4749678 R 316057 CDS YP_571407.1 91978748 4024812 complement(4750393..4751112) 1 NC_007958.1 ABC transporter-like protein 4751112 4024812 RPD_4289 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571407.1 4750393 R 316057 CDS YP_571408.1 91978749 4024813 complement(4751116..4752189) 1 NC_007958.1 inner-membrane translocator 4752189 4024813 RPD_4290 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_571408.1 4751116 R 316057 CDS YP_571409.1 91978750 4024814 complement(4752202..4753068) 1 NC_007958.1 inner-membrane translocator 4753068 4024814 RPD_4291 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_571409.1 4752202 R 316057 CDS YP_571410.1 91978751 4024815 complement(4753184..4754422) 1 NC_007958.1 putative urea/short-chain amide transport system substrate-binding protein 4754422 4024815 RPD_4292 Rhodopseudomonas palustris BisB5 putative urea/short-chain amide transport system substrate-binding protein YP_571410.1 4753184 R 316057 CDS YP_571411.1 91978752 4024816 complement(4754452..4755450) 1 NC_007958.1 acetamidase/formamidase 4755450 4024816 RPD_4293 Rhodopseudomonas palustris BisB5 acetamidase/formamidase YP_571411.1 4754452 R 316057 CDS YP_571412.1 91978753 4024817 complement(4755467..4756867) 1 NC_007958.1 amidase 4756867 4024817 RPD_4294 Rhodopseudomonas palustris BisB5 amidase YP_571412.1 4755467 R 316057 CDS YP_571413.1 91978754 4024818 4757280..4758446 1 NC_007958.1 putative aliphatic amidase expression-regulating protein, AmiC 4758446 4024818 RPD_4295 Rhodopseudomonas palustris BisB5 putative aliphatic amidase expression-regulating protein, AmiC YP_571413.1 4757280 D 316057 CDS YP_571414.1 91978755 4024819 4758443..4759027 1 NC_007958.1 hypothetical protein 4759027 4024819 RPD_4296 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571414.1 4758443 D 316057 CDS YP_571415.1 91978756 4024820 complement(4759052..4760206) 1 NC_007958.1 ribonuclease BN 4760206 4024820 RPD_4297 Rhodopseudomonas palustris BisB5 ribonuclease BN YP_571415.1 4759052 R 316057 CDS YP_571416.1 91978757 4024822 4760743..4762524 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4762524 4024822 RPD_4298 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_571416.1 4760743 D 316057 CDS YP_571417.1 91978758 4024823 4762720..4763481 1 NC_007958.1 enoyl-CoA hydratase/isomerase 4763481 4024823 RPD_4299 Rhodopseudomonas palustris BisB5 enoyl-CoA hydratase/isomerase YP_571417.1 4762720 D 316057 CDS YP_571418.1 91978759 4024824 complement(4763521..4766484) 1 NC_007958.1 outer membrane autotransporter barrel domain-containing protein 4766484 4024824 RPD_4300 Rhodopseudomonas palustris BisB5 outer membrane autotransporter barrel domain-containing protein YP_571418.1 4763521 R 316057 CDS YP_571419.1 91978760 4024825 complement(4766704..4767276) 1 NC_007958.1 hypothetical protein 4767276 4024825 RPD_4301 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571419.1 4766704 R 316057 CDS YP_571420.1 91978761 4024826 4767472..4769295 1 NC_007958.1 5'-nucleotidase-like protein 4769295 4024826 RPD_4302 Rhodopseudomonas palustris BisB5 5'-nucleotidase-like protein YP_571420.1 4767472 D 316057 CDS YP_571421.1 91978762 4024827 4769506..4770435 1 NC_007958.1 histone deacetylase superfamily protein 4770435 4024827 RPD_4303 Rhodopseudomonas palustris BisB5 histone deacetylase superfamily protein YP_571421.1 4769506 D 316057 CDS YP_571422.1 91978763 4024828 4770504..4770755 1 NC_007958.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 4770755 4024828 RPD_4304 Rhodopseudomonas palustris BisB5 exodeoxyribonuclease VII small subunit YP_571422.1 4770504 D 316057 CDS YP_571423.1 91978764 4024829 4771250..4773166 1 NC_007958.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 4773166 4024829 RPD_4305 Rhodopseudomonas palustris BisB5 1-deoxy-D-xylulose-5-phosphate synthase YP_571423.1 4771250 D 316057 CDS YP_571424.1 91978765 4024830 4773346..4773915 1 NC_007958.1 nucleoside 2-deoxyribosyltransferase 4773915 4024830 RPD_4306 Rhodopseudomonas palustris BisB5 nucleoside 2-deoxyribosyltransferase YP_571424.1 4773346 D 316057 CDS YP_571425.1 91978766 4024831 4773918..4774658 1 NC_007958.1 hemolysin A 4774658 4024831 RPD_4307 Rhodopseudomonas palustris BisB5 hemolysin A YP_571425.1 4773918 D 316057 CDS YP_571426.1 91978767 4024832 4774824..4776236 1 NC_007958.1 MATE efflux family protein 4776236 4024832 RPD_4308 Rhodopseudomonas palustris BisB5 MATE efflux family protein YP_571426.1 4774824 D 316057 CDS YP_571427.1 91978768 4024833 4776343..4777581 1 NC_007958.1 RNA methyltransferase 4777581 4024833 RPD_4309 Rhodopseudomonas palustris BisB5 RNA methyltransferase YP_571427.1 4776343 D 316057 CDS YP_571428.1 91978769 4024834 complement(4777733..4778143) 1 NC_007958.1 hypothetical protein 4778143 4024834 RPD_4310 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571428.1 4777733 R 316057 CDS YP_571429.1 91978770 4024835 complement(4778140..4778472) 1 NC_007958.1 hypothetical protein 4778472 4024835 RPD_4311 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571429.1 4778140 R 316057 CDS YP_571430.1 91978771 4024836 4778772..4780760 1 NC_007958.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 4780760 4024836 RPD_4312 Rhodopseudomonas palustris BisB5 transketolase YP_571430.1 4778772 D 316057 CDS YP_571431.1 91978772 4024837 4780884..4781891 1 NC_007958.1 glyceraldehyde-3-phosphate dehydrogenase, type I 4781891 4024837 RPD_4313 Rhodopseudomonas palustris BisB5 glyceraldehyde-3-phosphate dehydrogenase, type I YP_571431.1 4780884 D 316057 CDS YP_571432.1 91978773 4024838 4782051..4783247 1 NC_007958.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 4783247 pgk 4024838 pgk Rhodopseudomonas palustris BisB5 phosphoglycerate kinase YP_571432.1 4782051 D 316057 CDS YP_571433.1 91978774 4024839 4783332..4783613 1 NC_007958.1 hypothetical protein 4783613 4024839 RPD_4315 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571433.1 4783332 D 316057 CDS YP_571434.1 91978775 4024840 4783610..4783933 1 NC_007958.1 PemK-like protein 4783933 4024840 RPD_4316 Rhodopseudomonas palustris BisB5 PemK-like protein YP_571434.1 4783610 D 316057 CDS YP_571435.1 91978776 4024841 4784004..4785032 1 NC_007958.1 fructose-bisphosphate aldolase 4785032 4024841 RPD_4317 Rhodopseudomonas palustris BisB5 fructose-bisphosphate aldolase YP_571435.1 4784004 D 316057 CDS YP_571436.1 91978777 4024842 4785038..4785709 1 NC_007958.1 thiamine monophosphate synthase 4785709 4024842 RPD_4318 Rhodopseudomonas palustris BisB5 thiamine monophosphate synthase YP_571436.1 4785038 D 316057 CDS YP_571437.1 91978778 4024843 4785713..4786816 1 NC_007958.1 hypothetical protein 4786816 4024843 RPD_4319 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571437.1 4785713 D 316057 CDS YP_571438.1 91978779 4024844 4787043..4787831 1 NC_007958.1 inositol-1(or 4)-monophosphatase 4787831 4024844 RPD_4320 Rhodopseudomonas palustris BisB5 inositol-1(or 4)-monophosphatase YP_571438.1 4787043 D 316057 CDS YP_571439.1 91978780 4024845 4788206..4788529 1 NC_007958.1 hypothetical protein 4788529 4024845 RPD_4321 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571439.1 4788206 D 316057 CDS YP_571440.1 91978781 4024846 4788835..4789914 1 NC_007958.1 radical SAM family protein 4789914 4024846 RPD_4322 Rhodopseudomonas palustris BisB5 radical SAM family protein YP_571440.1 4788835 D 316057 CDS YP_571441.1 91978782 4024847 4790137..4791258 1 NC_007958.1 radical SAM family protein 4791258 4024847 RPD_4323 Rhodopseudomonas palustris BisB5 radical SAM family protein YP_571441.1 4790137 D 316057 CDS YP_571442.1 91978783 4024848 4791280..4791837 1 NC_007958.1 hypothetical protein 4791837 4024848 RPD_4324 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571442.1 4791280 D 316057 CDS YP_571443.1 91978784 4024849 complement(4792013..4792933) 1 NC_007958.1 peptidase U32 4792933 4024849 RPD_4325 Rhodopseudomonas palustris BisB5 peptidase U32 YP_571443.1 4792013 R 316057 CDS YP_571444.1 91978785 4024850 complement(4793083..4794060) 1 NC_007958.1 peptidase U32 4794060 4024850 RPD_4326 Rhodopseudomonas palustris BisB5 peptidase U32 YP_571444.1 4793083 R 316057 CDS YP_571445.1 91978786 4024851 complement(4794051..4794608) 1 NC_007958.1 hypothetical protein 4794608 4024851 RPD_4327 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571445.1 4794051 R 316057 CDS YP_571446.1 91978787 4024852 4794723..4796261 1 NC_007958.1 carboxylyase-like protein 4796261 4024852 RPD_4328 Rhodopseudomonas palustris BisB5 carboxylyase-like protein YP_571446.1 4794723 D 316057 CDS YP_571447.1 91978788 4024853 4796258..4796860 1 NC_007958.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 4796860 4024853 RPD_4329 Rhodopseudomonas palustris BisB5 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_571447.1 4796258 D 316057 CDS YP_571448.1 91978789 4024854 complement(4796894..4797487) 1 NC_007958.1 hypothetical protein 4797487 4024854 RPD_4330 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571448.1 4796894 R 316057 CDS YP_571449.1 91978790 4024855 4797584..4798138 1 NC_007958.1 hypothetical protein 4798138 4024855 RPD_4331 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571449.1 4797584 D 316057 CDS YP_571450.1 91978791 4024856 4798142..4798375 1 NC_007958.1 helix-turn-helix type 3 4798375 4024856 RPD_4332 Rhodopseudomonas palustris BisB5 helix-turn-helix type 3 YP_571450.1 4798142 D 316057 CDS YP_571451.1 91978792 4024857 complement(4798489..4798677) 1 NC_007958.1 hypothetical protein 4798677 4024857 RPD_4333 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571451.1 4798489 R 316057 CDS YP_571452.1 91978793 4024858 complement(4798754..4799011) 1 NC_007958.1 hypothetical protein 4799011 4024858 RPD_4334 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571452.1 4798754 R 316057 CDS YP_571453.1 91978794 4024859 complement(4799218..4800243) 1 NC_007958.1 cyclopropane-fatty-acyl-phospholipid synthase 4800243 4024859 RPD_4335 Rhodopseudomonas palustris BisB5 cyclopropane-fatty-acyl-phospholipid synthase YP_571453.1 4799218 R 316057 CDS YP_571454.1 91978795 4024860 complement(4800240..4801064) 1 NC_007958.1 hypothetical protein 4801064 4024860 RPD_4336 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571454.1 4800240 R 316057 CDS YP_571455.1 91978796 4024861 4801260..4802261 1 NC_007958.1 hypothetical protein 4802261 4024861 RPD_4337 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571455.1 4801260 D 316057 CDS YP_571456.1 91978797 4024862 4802327..4803352 1 NC_007958.1 hypothetical protein 4803352 4024862 RPD_4338 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571456.1 4802327 D 316057 CDS YP_571457.1 91978798 4024863 4803552..4803995 1 NC_007958.1 GCN5-like N-acetyltransferase 4803995 4024863 RPD_4339 Rhodopseudomonas palustris BisB5 GCN5-like N-acetyltransferase YP_571457.1 4803552 D 316057 CDS YP_571458.1 91978799 4024864 4804033..4804260 1 NC_007958.1 hypothetical protein 4804260 4024864 RPD_4340 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571458.1 4804033 D 316057 CDS YP_571459.1 91978800 4024865 4804257..4804550 1 NC_007958.1 plasmid stabilization system protein 4804550 4024865 RPD_4341 Rhodopseudomonas palustris BisB5 plasmid stabilization system protein YP_571459.1 4804257 D 316057 CDS YP_571460.1 91978801 4024866 complement(4804559..4806478) 1 NC_007958.1 ABC transporter ATP-binding/permease 4806478 4024866 RPD_4342 Rhodopseudomonas palustris BisB5 ABC transporter ATP-binding/permease YP_571460.1 4804559 R 316057 CDS YP_571461.1 91978802 4024867 4806721..4806948 1 NC_007958.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 4806948 rpmE 4024867 rpmE Rhodopseudomonas palustris BisB5 50S ribosomal protein L31 YP_571461.1 4806721 D 316057 CDS YP_571462.1 91978803 4024868 complement(4807152..4807667) 1 NC_007958.1 hypothetical protein 4807667 4024868 RPD_4344 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571462.1 4807152 R 316057 CDS YP_571463.1 91978804 4024869 complement(4808124..4808315) 1 NC_007958.1 hypothetical protein 4808315 4024869 RPD_4345 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571463.1 4808124 R 316057 CDS YP_571464.1 91978805 4024870 4808414..4809412 1 NC_007958.1 zinc-binding alcohol dehydrogenase 4809412 4024870 RPD_4346 Rhodopseudomonas palustris BisB5 zinc-binding alcohol dehydrogenase YP_571464.1 4808414 D 316057 CDS YP_571465.1 91978806 4024871 4809546..4812422 1 NC_007958.1 GGDEF domain-containing protein 4812422 4024871 RPD_4347 Rhodopseudomonas palustris BisB5 GGDEF domain-containing protein YP_571465.1 4809546 D 316057 CDS YP_571466.1 91978807 4024872 complement(4812597..4813310) 1 NC_007958.1 hypothetical protein 4813310 4024872 RPD_4348 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571466.1 4812597 R 316057 CDS YP_571467.1 91978808 4024873 4813444..4814277 1 NC_007958.1 hypothetical protein 4814277 4024873 RPD_4349 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571467.1 4813444 D 316057 CDS YP_571468.1 91978809 4024874 complement(4814358..4815293) 1 NC_007958.1 LysR family transcriptional regulator 4815293 4024874 RPD_4350 Rhodopseudomonas palustris BisB5 LysR family transcriptional regulator YP_571468.1 4814358 R 316057 CDS YP_571469.1 91978810 4024875 4815409..4816107 1 NC_007958.1 Pirin-like protein 4816107 4024875 RPD_4351 Rhodopseudomonas palustris BisB5 Pirin-like protein YP_571469.1 4815409 D 316057 CDS YP_571470.1 91978811 4024876 4816276..4816875 1 NC_007958.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 4816875 4024876 RPD_4352 Rhodopseudomonas palustris BisB5 TrpR binding protein WrbA YP_571470.1 4816276 D 316057 CDS YP_571471.1 91978812 4024877 complement(4817225..4818751) 1 NC_007958.1 hypothetical protein 4818751 4024877 RPD_4353 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571471.1 4817225 R 316057 CDS YP_571472.1 91978813 4024878 complement(4818748..4819497) 1 NC_007958.1 ABC transporter-like protein 4819497 4024878 RPD_4354 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571472.1 4818748 R 316057 CDS YP_571473.1 91978814 4024879 complement(4819660..4819935) 1 NC_007958.1 hypothetical protein 4819935 4024879 RPD_4355 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571473.1 4819660 R 316057 CDS YP_571474.1 91978815 4024881 complement(4820292..4820651) 1 NC_007958.1 response regulator receiver 4820651 4024881 RPD_4356 Rhodopseudomonas palustris BisB5 response regulator receiver YP_571474.1 4820292 R 316057 CDS YP_571475.1 91978816 4024882 4820943..4821830 1 NC_007958.1 N-formylglutamate amidohydrolase 4821830 4024882 RPD_4357 Rhodopseudomonas palustris BisB5 N-formylglutamate amidohydrolase YP_571475.1 4820943 D 316057 CDS YP_571476.1 91978817 4024883 4822372..4823154 1 NC_007958.1 histidinol-phosphate phosphatase , inositol monophosphatase 4823154 4024883 RPD_4358 Rhodopseudomonas palustris BisB5 histidinol-phosphate phosphatase , inositol monophosphatase YP_571476.1 4822372 D 316057 CDS YP_571477.1 91978818 4024884 complement(4823173..4823763) 1 NC_007958.1 regulatory protein TetR 4823763 4024884 RPD_4359 Rhodopseudomonas palustris BisB5 regulatory protein TetR YP_571477.1 4823173 R 316057 CDS YP_571478.1 91978819 4024885 4823829..4824260 1 NC_007958.1 glyoxalase/bleomycin resistance protein/dioxygenase 4824260 4024885 RPD_4360 Rhodopseudomonas palustris BisB5 glyoxalase/bleomycin resistance protein/dioxygenase YP_571478.1 4823829 D 316057 CDS YP_571479.1 91978820 4024886 4824275..4825060 1 NC_007958.1 hypothetical protein 4825060 4024886 RPD_4361 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571479.1 4824275 D 316057 CDS YP_571480.1 91978821 4024887 complement(4825067..4825702) 1 NC_007958.1 lysine exporter protein LysE/YggA 4825702 4024887 RPD_4362 Rhodopseudomonas palustris BisB5 lysine exporter protein LysE/YggA YP_571480.1 4825067 R 316057 CDS YP_571481.1 91978822 4024888 4825899..4827308 1 NC_007958.1 lytic murein transglycosylase 4827308 4024888 RPD_4363 Rhodopseudomonas palustris BisB5 lytic murein transglycosylase YP_571481.1 4825899 D 316057 CDS YP_571482.1 91978823 4024889 4827599..4829242 1 NC_007958.1 hypothetical protein 4829242 4024889 RPD_4364 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571482.1 4827599 D 316057 CDS YP_571483.1 91978824 4024890 complement(4829302..4830108) 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 4830108 4024890 RPD_4365 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_571483.1 4829302 R 316057 CDS YP_571484.1 91978825 4024891 4830183..4830962 1 NC_007958.1 short-chain dehydrogenase/reductase SDR 4830962 4024891 RPD_4366 Rhodopseudomonas palustris BisB5 short-chain dehydrogenase/reductase SDR YP_571484.1 4830183 D 316057 CDS YP_571485.1 91978826 4024892 complement(4831034..4831744) 1 NC_007958.1 ABC transporter-like protein 4831744 4024892 RPD_4367 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571485.1 4831034 R 316057 CDS YP_571486.1 91978827 4024893 complement(4831741..4832499) 1 NC_007958.1 ABC transporter-like protein 4832499 4024893 RPD_4368 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571486.1 4831741 R 316057 CDS YP_571487.1 91978828 4024894 complement(4832492..4833532) 1 NC_007958.1 inner-membrane translocator 4833532 4024894 RPD_4369 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_571487.1 4832492 R 316057 CDS YP_571488.1 91978829 4024895 complement(4833532..4834404) 1 NC_007958.1 inner-membrane translocator 4834404 4024895 RPD_4370 Rhodopseudomonas palustris BisB5 inner-membrane translocator YP_571488.1 4833532 R 316057 CDS YP_571489.1 91978830 4024896 complement(4834587..4835795) 1 NC_007958.1 twin-arginine translocation pathway signal 4835795 4024896 RPD_4371 Rhodopseudomonas palustris BisB5 twin-arginine translocation pathway signal YP_571489.1 4834587 R 316057 CDS YP_571490.1 91978831 4024897 complement(4836220..4836471) 1 NC_007958.1 type IV pilus assembly PilZ 4836471 4024897 RPD_4372 Rhodopseudomonas palustris BisB5 type IV pilus assembly PilZ YP_571490.1 4836220 R 316057 CDS YP_571491.1 91978832 4024898 complement(4836584..4837897) 1 NC_007958.1 extracellular solute-binding protein 4837897 4024898 RPD_4373 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_571491.1 4836584 R 316057 CDS YP_571492.1 91978833 4024899 4838166..4840238 1 NC_007958.1 periplasmic sensor signal transduction histidine kinase 4840238 4024899 RPD_4374 Rhodopseudomonas palustris BisB5 periplasmic sensor signal transduction histidine kinase YP_571492.1 4838166 D 316057 CDS YP_571493.1 91978834 4024900 4840295..4841947 1 NC_007958.1 response regulator receiver sensor signal transduction histidine kinase 4841947 4024900 RPD_4375 Rhodopseudomonas palustris BisB5 response regulator receiver sensor signal transduction histidine kinase YP_571493.1 4840295 D 316057 CDS YP_571494.1 91978835 4024901 4841944..4842687 1 NC_007958.1 winged helix family two component transcriptional regulator 4842687 4024901 RPD_4376 Rhodopseudomonas palustris BisB5 winged helix family two component transcriptional regulator YP_571494.1 4841944 D 316057 CDS YP_571495.1 91978836 4024902 4842988..4843599 1 NC_007958.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 4843599 4024902 RPD_4377 Rhodopseudomonas palustris BisB5 RNA polymerase sigma factor YP_571495.1 4842988 D 316057 CDS YP_571496.1 91978837 4024903 4844098..4845504 1 NC_007958.1 cytochrome bd ubiquinol oxidase subunit I 4845504 4024903 RPD_4378 Rhodopseudomonas palustris BisB5 cytochrome bd ubiquinol oxidase subunit I YP_571496.1 4844098 D 316057 CDS YP_571497.1 91978838 4024904 4845507..4846511 1 NC_007958.1 cytochrome d ubiquinol oxidase subunit II 4846511 4024904 RPD_4379 Rhodopseudomonas palustris BisB5 cytochrome d ubiquinol oxidase subunit II YP_571497.1 4845507 D 316057 CDS YP_571498.1 91978839 4024905 4846508..4846639 1 NC_007958.1 hypothetical protein 4846639 4024905 RPD_4380 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571498.1 4846508 D 316057 CDS YP_571499.1 91978840 4024906 4846682..4847275 1 NC_007958.1 hypothetical protein 4847275 4024906 RPD_4381 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571499.1 4846682 D 316057 CDS YP_571500.1 91978841 4024907 4847347..4848372 1 NC_007958.1 extracellular solute-binding protein 4848372 4024907 RPD_4382 Rhodopseudomonas palustris BisB5 extracellular solute-binding protein YP_571500.1 4847347 D 316057 CDS YP_571501.1 91978842 4024908 complement(4848723..4849862) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4849862 4024908 RPD_4383 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_571501.1 4848723 R 316057 CDS YP_571502.1 91978843 4024909 complement(4850027..4851223) 1 NC_007958.1 acyl-CoA dehydrogenase-like protein 4851223 4024909 RPD_4384 Rhodopseudomonas palustris BisB5 acyl-CoA dehydrogenase-like protein YP_571502.1 4850027 R 316057 CDS YP_571503.1 91978844 4024910 4851400..4851945 1 NC_007958.1 hypothetical protein 4851945 4024910 RPD_4385 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571503.1 4851400 D 316057 CDS YP_571504.1 91978845 4024911 complement(4852104..4853321) 1 NC_007958.1 major facilitator transporter 4853321 4024911 RPD_4386 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_571504.1 4852104 R 316057 CDS YP_571505.1 91978846 4024912 complement(4853425..4854645) 1 NC_007958.1 major facilitator transporter 4854645 4024912 RPD_4387 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_571505.1 4853425 R 316057 CDS YP_571506.1 91978847 4024913 complement(4854763..4855446) 1 NC_007958.1 hypothetical protein 4855446 4024913 RPD_4388 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571506.1 4854763 R 316057 CDS YP_571507.1 91978848 4024915 4855893..4858007 1 NC_007958.1 TonB-dependent receptor 4858007 4024915 RPD_4390 Rhodopseudomonas palustris BisB5 TonB-dependent receptor YP_571507.1 4855893 D 316057 CDS YP_571508.1 91978849 4024916 4858077..4858427 1 NC_007958.1 hypothetical protein 4858427 4024916 RPD_4391 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571508.1 4858077 D 316057 CDS YP_571509.1 91978850 4024917 4858546..4858767 1 NC_007958.1 hypothetical protein 4858767 4024917 RPD_4392 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571509.1 4858546 D 316057 CDS YP_571510.1 91978851 4024918 4858951..4860162 1 NC_007958.1 major facilitator transporter 4860162 4024918 RPD_4393 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_571510.1 4858951 D 316057 CDS YP_571511.1 91978852 4024919 4860342..4861562 1 NC_007958.1 extracellular ligand-binding receptor 4861562 4024919 RPD_4394 Rhodopseudomonas palustris BisB5 extracellular ligand-binding receptor YP_571511.1 4860342 D 316057 CDS YP_571512.1 91978853 4024920 complement(4861877..4863181) 1 NC_007958.1 major facilitator transporter 4863181 4024920 RPD_4395 Rhodopseudomonas palustris BisB5 major facilitator transporter YP_571512.1 4861877 R 316057 CDS YP_571513.1 91978854 4024921 4863385..4864152 1 NC_007958.1 ABC transporter-like protein 4864152 4024921 RPD_4396 Rhodopseudomonas palustris BisB5 ABC transporter-like protein YP_571513.1 4863385 D 316057 CDS YP_571514.1 91978855 4024922 4864149..4866614 1 NC_007958.1 hypothetical protein 4866614 4024922 RPD_4397 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571514.1 4864149 D 316057 CDS YP_571515.1 91978856 4024923 4866604..4867692 1 NC_007958.1 hypothetical protein 4867692 4024923 RPD_4398 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571515.1 4866604 D 316057 CDS YP_571516.1 91978857 4024924 4867760..4868152 1 NC_007958.1 membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) 4868152 4024924 RPD_4399 Rhodopseudomonas palustris BisB5 membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) YP_571516.1 4867760 D 316057 CDS YP_571517.1 91978858 4024925 complement(4868378..4869571) 1 NC_007958.1 putative branched chain amino acid periplasmic binding protein of ABC transporter 4869571 4024925 RPD_4400 Rhodopseudomonas palustris BisB5 putative branched chain amino acid periplasmic binding protein of ABC transporter YP_571517.1 4868378 R 316057 CDS YP_571518.1 91978859 4024926 complement(4869694..4871373) 1 NC_007958.1 OmpA-like transmembrane region 4871373 4024926 RPD_4401 Rhodopseudomonas palustris BisB5 OmpA-like transmembrane region YP_571518.1 4869694 R 316057 CDS YP_571519.1 91978860 4024927 complement(4871463..4873349) 1 NC_007958.1 molecular chaperone; heat shock protein 90 4873349 4024927 RPD_4402 Rhodopseudomonas palustris BisB5 heat shock protein 90 YP_571519.1 4871463 R 316057 CDS YP_571520.1 91978861 4024928 complement(4873648..4875012) 1 NC_007958.1 periplasmic sensor signal transduction histidine kinase 4875012 4024928 RPD_4403 Rhodopseudomonas palustris BisB5 periplasmic sensor signal transduction histidine kinase YP_571520.1 4873648 R 316057 CDS YP_571521.1 91978862 4024929 complement(4875009..4875674) 1 NC_007958.1 winged helix family two component transcriptional regulator 4875674 4024929 RPD_4404 Rhodopseudomonas palustris BisB5 winged helix family two component transcriptional regulator YP_571521.1 4875009 R 316057 CDS YP_571522.1 91978863 4024930 complement(4875674..4876057) 1 NC_007958.1 peptidase 4876057 4024930 RPD_4405 Rhodopseudomonas palustris BisB5 peptidase YP_571522.1 4875674 R 316057 CDS YP_571523.1 91978864 4024931 complement(4876252..4876563) 1 NC_007958.1 hypothetical protein 4876563 4024931 RPD_4406 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571523.1 4876252 R 316057 CDS YP_571524.1 91978865 4024932 complement(4876724..4877848) 1 NC_007958.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 4877848 mtnA 4024932 mtnA Rhodopseudomonas palustris BisB5 methylthioribose-1-phosphate isomerase YP_571524.1 4876724 R 316057 CDS YP_571525.1 91978866 4024933 complement(4877903..4878778) 1 NC_007958.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 4878778 4024933 RPD_4408 Rhodopseudomonas palustris BisB5 5'-methylthioadenosine phosphorylase YP_571525.1 4877903 R 316057 CDS YP_571526.1 91978867 4024934 4878895..4880148 1 NC_007958.1 iron-containing alcohol dehydrogenase 4880148 4024934 RPD_4409 Rhodopseudomonas palustris BisB5 iron-containing alcohol dehydrogenase YP_571526.1 4878895 D 316057 CDS YP_571527.1 91978868 4024935 4880173..4881723 1 NC_007958.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 4881723 4024935 RPD_4410 Rhodopseudomonas palustris BisB5 acyl-CoA synthetase YP_571527.1 4880173 D 316057 CDS YP_571528.1 91978869 4024936 complement(4881901..4882863) 1 NC_007958.1 transposase, IS4 4882863 4024936 RPD_4411 Rhodopseudomonas palustris BisB5 transposase, IS4 YP_571528.1 4881901 R 316057 CDS YP_571529.1 91978870 4024937 4883159..4885018 1 NC_007958.1 ATP-dependent DNA helicase RecQ 4885018 4024937 RPD_4412 Rhodopseudomonas palustris BisB5 ATP-dependent DNA helicase RecQ YP_571529.1 4883159 D 316057 CDS YP_571530.1 91978871 4024938 4885081..4885308 1 NC_007958.1 hypothetical protein 4885308 4024938 RPD_4413 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571530.1 4885081 D 316057 CDS YP_571531.1 91978872 4024939 complement(4885334..4885615) 1 NC_007958.1 hypothetical protein 4885615 4024939 RPD_4414 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571531.1 4885334 R 316057 CDS YP_571532.1 91978873 4024940 4885955..4887538 1 NC_007958.1 AMP-dependent synthetase and ligase 4887538 4024940 RPD_4415 Rhodopseudomonas palustris BisB5 AMP-dependent synthetase and ligase YP_571532.1 4885955 D 316057 CDS YP_571533.1 91978874 4024941 complement(4887560..4888666) 1 NC_007958.1 metal-dependent phosphohydrolase 4888666 4024941 RPD_4416 Rhodopseudomonas palustris BisB5 metal-dependent phosphohydrolase YP_571533.1 4887560 R 316057 CDS YP_571534.1 91978875 4024942 4888858..4889259 1 NC_007958.1 hypothetical protein 4889259 4024942 RPD_4417 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571534.1 4888858 D 316057 CDS YP_571535.1 91978876 4024943 complement(4889453..4890115) 1 NC_007958.1 polysaccharide export protein 4890115 4024943 RPD_4418 Rhodopseudomonas palustris BisB5 polysaccharide export protein YP_571535.1 4889453 R 316057 CDS YP_571536.1 91978877 4024944 complement(4890259..4890906) 1 NC_007958.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 4890906 4024944 RPD_4419 Rhodopseudomonas palustris BisB5 methionine sulfoxide reductase A YP_571536.1 4890259 R 316057 CDS YP_571537.1 91978878 4024945 complement(4891078..4891395) 1 NC_007958.1 hypothetical protein 4891395 4024945 RPD_4420 Rhodopseudomonas palustris BisB5 hypothetical protein YP_571537.1 4891078 R 316057 CDS YP_571538.1 91978879 4024946 4891771..4892037 1 NC_007958.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 4892037 rpsT 4024946 rpsT Rhodopseudomonas palustris BisB5 30S ribosomal protein S20 YP_571538.1 4891771 D 316057 CDS