-- dump date 20140620_032625 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_945357.1 39933081 2692819 679..2097 1 NC_005296.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 2097 dnaA 2692819 dnaA Rhodopseudomonas palustris CGA009 chromosome replication initiator DnaA NP_945357.1 679 D 258594 CDS NP_945358.1 39933082 2692805 2332..3450 1 NC_005296.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3450 dnaN 2692805 dnaN Rhodopseudomonas palustris CGA009 DNA polymerase III subunit beta NP_945358.1 2332 D 258594 CDS NP_945359.1 39933083 2692846 3667..4833 1 NC_005296.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4833 recF 2692846 recF Rhodopseudomonas palustris CGA009 recombination protein F NP_945359.1 3667 D 258594 CDS NP_945360.1 39933084 2689404 5050..7491 1 NC_005296.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 7491 gyrB 2689404 gyrB Rhodopseudomonas palustris CGA009 DNA gyrase subunit B NP_945360.1 5050 D 258594 CDS NP_945361.1 39933085 2692849 complement(7673..8791) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 4-hydroxyphenylpyruvate dioxygenase 8791 hpd 2692849 hpd Rhodopseudomonas palustris CGA009 4-hydroxyphenylpyruvate dioxygenase NP_945361.1 7673 R 258594 CDS NP_945362.1 39933086 2689407 8917..9396 1 NC_005296.1 AsnC family transcriptional regulator 9396 2689407 RPA0006 Rhodopseudomonas palustris CGA009 AsnC family transcriptional regulator NP_945362.1 8917 D 258594 CDS NP_945363.1 39933087 2689170 complement(9442..10893) 1 NC_005296.1 signal transduction histidine kinase 10893 2689170 RPA0007 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_945363.1 9442 R 258594 CDS NP_945364.1 39933088 2689455 complement(10890..11174) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; circadian clock protein 11174 kaiB 2689455 kaiB Rhodopseudomonas palustris CGA009 circadian clock protein NP_945364.1 10890 R 258594 CDS NP_945365.1 39933089 2692834 complement(11184..12875) 1 NC_005296.1 acts as a promotor non-specific transcription repressor; circadian clock protein KaiC 12875 kaiC 2692834 kaiC Rhodopseudomonas palustris CGA009 circadian clock protein KaiC NP_945365.1 11184 R 258594 CDS NP_945366.1 39933090 2693141 complement(13269..13778) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutamate uptake transcriptional regulator 13778 2693141 RPA0010 Rhodopseudomonas palustris CGA009 glutamate uptake transcriptional regulator NP_945366.1 13269 R 258594 CDS NP_945367.1 39933091 2689327 complement(14266..14514) 1 NC_005296.1 hypothetical protein 14514 2689327 RPA0011 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945367.1 14266 R 258594 CDS NP_945368.1 39933092 2689428 complement(14516..14701) 1 NC_005296.1 cytochrome oxidase maturation protein 14701 rdxS 2689428 rdxS Rhodopseudomonas palustris CGA009 cytochrome oxidase maturation protein NP_945368.1 14516 R 258594 CDS NP_945369.1 39933093 2689585 complement(14692..16890) 1 NC_005296.1 cation (heavy metal) transporting ATPase 16890 rdxI 2689585 rdxI Rhodopseudomonas palustris CGA009 cation (heavy metal) transporting ATPase NP_945369.1 14692 R 258594 CDS NP_945370.1 39933094 2691657 complement(16925..17428) 1 NC_005296.1 FixH family protein 17428 rdxH 2691657 rdxH Rhodopseudomonas palustris CGA009 FixH family protein NP_945370.1 16925 R 258594 CDS NP_945371.1 39933095 2689294 complement(17445..18902) 1 NC_005296.1 4Fe-4S ferredoxin 18902 fixG 2689294 fixG Rhodopseudomonas palustris CGA009 4Fe-4S ferredoxin NP_945371.1 17445 R 258594 CDS NP_945372.1 39933096 2688788 complement(19019..19900) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome c oxidase cbb3-type subunit III 19900 ccoP 2688788 ccoP Rhodopseudomonas palustris CGA009 cytochrome c oxidase cbb3-type subunit III NP_945372.1 19019 R 258594 CDS NP_945373.1 39933097 2689239 complement(19908..20072) 1 NC_005296.1 cbb3-type cytochrome oxidase subunit 20072 ccoQ 2689239 ccoQ Rhodopseudomonas palustris CGA009 cbb3-type cytochrome oxidase subunit NP_945373.1 19908 R 258594 CDS NP_945374.1 39933098 2689596 complement(20082..20816) 1 NC_005296.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 20816 ccoO 2689596 ccoO Rhodopseudomonas palustris CGA009 cbb3-type cytochrome c oxidase subunit II NP_945374.1 20082 R 258594 CDS NP_945375.1 39933099 2689417 complement(20829..22475) 1 NC_005296.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 22475 ccoN 2689417 ccoN Rhodopseudomonas palustris CGA009 cbb3-type cytochrome c oxidase subunit I NP_945375.1 20829 R 258594 CDS NP_945376.1 39933100 2692940 complement(22786..23706) 1 NC_005296.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 23706 panE1 2692940 panE1 Rhodopseudomonas palustris CGA009 2-dehydropantoate 2-reductase NP_945376.1 22786 R 258594 CDS NP_945377.1 39933101 2692906 complement(23779..24516) 1 NC_005296.1 short-chain dehydrogenase/reductase SDR 24516 2692906 RPA0021 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_945377.1 23779 R 258594 CDS NP_945378.1 39933102 2692758 complement(24637..25239) 1 NC_005296.1 DSBA oxidoreductase 25239 2692758 RPA0022 Rhodopseudomonas palustris CGA009 DSBA oxidoreductase NP_945378.1 24637 R 258594 CDS NP_945379.1 39933103 2692783 25362..26123 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutathione transferase 26123 gstA3 2692783 gstA3 Rhodopseudomonas palustris CGA009 glutathione transferase NP_945379.1 25362 D 258594 CDS NP_945380.1 39933104 2692664 complement(26235..27110) 1 NC_005296.1 short chain dehydrogenase 27110 2692664 RPA0024 Rhodopseudomonas palustris CGA009 short chain dehydrogenase NP_945380.1 26235 R 258594 CDS NP_945381.1 39933105 2692845 complement(27385..29118) 1 NC_005296.1 gamma-glutamyltransferase 29118 ggt1 2692845 ggt1 Rhodopseudomonas palustris CGA009 gamma-glutamyltransferase NP_945381.1 27385 R 258594 CDS NP_945382.1 39933106 2691512 29224..30621 1 NC_005296.1 major facilitator transporter 30621 2691512 RPA0026 Rhodopseudomonas palustris CGA009 major facilitator transporter NP_945382.1 29224 D 258594 CDS NP_945383.1 39933107 2689152 30837..31931 1 NC_005296.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 31931 aroG1 2689152 aroG1 Rhodopseudomonas palustris CGA009 phospho-2-dehydro-3-deoxyheptonate aldolase NP_945383.1 30837 D 258594 CDS NP_945384.1 39933108 2692630 complement(31989..33581) 1 NC_005296.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 33581 purH 2692630 purH Rhodopseudomonas palustris CGA009 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase NP_945384.1 31989 R 258594 CDS NP_945385.1 39933109 2692527 complement(33767..35653) 1 NC_005296.1 heparinase II/III-like 35653 2692527 RPA0029 Rhodopseudomonas palustris CGA009 heparinase II/III-like NP_945385.1 33767 R 258594 CDS NP_945386.1 39933110 2692350 complement(35820..37172) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Sun/ nucleolar Nop1/Nop2 37172 2692350 RPA0030 Rhodopseudomonas palustris CGA009 Sun/ nucleolar Nop1/Nop2 NP_945386.1 35820 R 258594 CDS NP_945387.1 39933111 2692486 37325..37543 1 NC_005296.1 hypothetical protein 37543 2692486 RPA0031 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945387.1 37325 D 258594 CDS NP_945388.1 39933112 2692354 37629..38204 1 NC_005296.1 nuclease-like protein 38204 2692354 RPA0032 Rhodopseudomonas palustris CGA009 nuclease-like protein NP_945388.1 37629 D 258594 CDS NP_945389.1 39933113 2692249 complement(38208..39092) 1 NC_005296.1 hypothetical protein 39092 2692249 RPA0033 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945389.1 38208 R 258594 CDS NP_945390.1 39933114 2692165 39440..40897 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; twin-arginine translocation pathway signal 40897 2692165 RPA0034 Rhodopseudomonas palustris CGA009 twin-arginine translocation pathway signal NP_945390.1 39440 D 258594 CDS NP_945391.1 39933115 2692122 complement(40904..43315) 1 NC_005296.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 43315 pheT 2692122 pheT Rhodopseudomonas palustris CGA009 phenylalanyl-tRNA synthetase subunit beta NP_945391.1 40904 R 258594 CDS NP_945392.1 39933116 2692069 complement(43460..43939) 1 NC_005296.1 hypothetical protein 43939 2692069 RPA0036 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945392.1 43460 R 258594 CDS NP_945393.1 39933117 2692030 complement(44200..45282) 1 NC_005296.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 45282 pheS 2692030 pheS Rhodopseudomonas palustris CGA009 phenylalanyl-tRNA synthetase subunit alpha NP_945393.1 44200 R 258594 CDS NP_945394.1 39933118 2691859 complement(45426..45785) 1 NC_005296.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 45785 rplT 2691859 rplT Rhodopseudomonas palustris CGA009 50S ribosomal protein L20 NP_945394.1 45426 R 258594 CDS NP_945395.1 39933119 2689066 complement(45869..46069) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 50S ribosomal protein L35 46069 rpmI 2689066 rpmI Rhodopseudomonas palustris CGA009 50S ribosomal protein L35 NP_945395.1 45869 R 258594 CDS NP_945396.1 39933120 2691263 complement(46403..46981) 1 NC_005296.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 46981 infC 2691263 infC Rhodopseudomonas palustris CGA009 translation initiation factor IF-3 NP_945396.1 46403 R 258594 CDS NP_945397.1 39933121 2691205 47263..48048 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 48048 2691205 RPA0041 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945397.1 47263 D 258594 CDS NP_945398.1 39933122 2691025 complement(48211..49323) 1 NC_005296.1 4Fe-4S ferredoxin 49323 2691025 RPA0042 Rhodopseudomonas palustris CGA009 4Fe-4S ferredoxin NP_945398.1 48211 R 258594 CDS NP_945399.1 39933123 2691036 complement(49368..50060) 1 NC_005296.1 glutathione S-transferase 50060 2691036 RPA0043 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_945399.1 49368 R 258594 CDS NP_945400.1 39933124 2690963 50260..51066 1 NC_005296.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 51066 uppP 2690963 uppP Rhodopseudomonas palustris CGA009 undecaprenyl pyrophosphate phosphatase NP_945400.1 50260 D 258594 CDS NP_945401.1 39933125 2691427 complement(51116..52081) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 52081 2691427 RPA0045 Rhodopseudomonas palustris CGA009 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex NP_945401.1 51116 R 258594 CDS NP_945402.1 39933126 2690538 52495..53109 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3'-5' exonuclease 53109 2690538 RPA0046 Rhodopseudomonas palustris CGA009 3'-5' exonuclease NP_945402.1 52495 D 258594 CDS NP_945403.1 39933127 2690422 53339..54079 1 NC_005296.1 hypothetical protein 54079 2690422 RPA0047 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945403.1 53339 D 258594 CDS NP_945404.1 39933128 2690273 54088..54753 1 NC_005296.1 OstA-like protein 54753 2690273 RPA0048 Rhodopseudomonas palustris CGA009 OstA-like protein NP_945404.1 54088 D 258594 CDS NP_945405.1 39933129 2691497 54870..55835 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter ATP-binding protein 55835 2691497 RPA0049 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_945405.1 54870 D 258594 CDS NP_945406.1 39933130 2691700 56042..57688 1 NC_005296.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 57688 rpoN 2691700 rpoN Rhodopseudomonas palustris CGA009 RNA polymerase factor sigma-54 NP_945406.1 56042 D 258594 CDS NP_945407.1 39933131 2690170 57746..58351 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sigma 54 modulation protein/ribosomal protein S30EA 58351 2690170 RPA0051 Rhodopseudomonas palustris CGA009 sigma 54 modulation protein/ribosomal protein S30EA NP_945407.1 57746 D 258594 CDS NP_945408.1 39933132 2689965 58627..59088 1 NC_005296.1 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 59088 ptsN1 2689965 ptsN1 Rhodopseudomonas palustris CGA009 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN NP_945408.1 58627 D 258594 CDS NP_945409.1 39933133 2689900 complement(59691..59957) 1 NC_005296.1 hypothetical protein 59957 2689900 RPA0053 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945409.1 59691 R 258594 CDS NP_945410.1 39933134 2689396 complement(60008..60433) 1 NC_005296.1 heat shock protein Hsp20 60433 2689396 RPA0054 Rhodopseudomonas palustris CGA009 heat shock protein Hsp20 NP_945410.1 60008 R 258594 CDS NP_945411.1 39933135 2691569 complement(60587..61678) 1 NC_005296.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 61678 ugpC 2691569 ugpC Rhodopseudomonas palustris CGA009 glycerol-3-phosphate transporter ATP-binding subunit NP_945411.1 60587 R 258594 CDS NP_945412.1 39933136 2690020 complement(61681..62529) 1 NC_005296.1 binding-protein-dependent transport system inner membrane protein 62529 ugpE 2690020 ugpE Rhodopseudomonas palustris CGA009 binding-protein-dependent transport system inner membrane protein NP_945412.1 61681 R 258594 CDS NP_945413.1 39933137 2693029 complement(62529..63410) 1 NC_005296.1 binding-protein-dependent transport systems inner membrane component 63410 ugpA 2693029 ugpA Rhodopseudomonas palustris CGA009 binding-protein-dependent transport systems inner membrane component NP_945413.1 62529 R 258594 CDS NP_945414.1 39933138 2691294 complement(63575..64903) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; family 1 extracellular solute-binding protein 64903 ugpB1 2691294 ugpB1 Rhodopseudomonas palustris CGA009 family 1 extracellular solute-binding protein NP_945414.1 63575 R 258594 CDS NP_945415.1 39933139 2691544 complement(65126..66331) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; L-carnitine dehydratase/bile acid-inducible protein F 66331 2691544 RPA0059 Rhodopseudomonas palustris CGA009 L-carnitine dehydratase/bile acid-inducible protein F NP_945415.1 65126 R 258594 CDS NP_945416.1 39933140 2691507 complement(66656..67057) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 67057 2691507 RPA0060 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945416.1 66656 R 258594 CDS NP_945417.1 39933141 2688802 67198..68535 1 NC_005296.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 68535 aroA 2688802 aroA Rhodopseudomonas palustris CGA009 3-phosphoshikimate 1-carboxyvinyltransferase NP_945417.1 67198 D 258594 CDS NP_945418.1 39933142 2693054 complement(68539..69213) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 69213 2693054 RPA0062 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945418.1 68539 R 258594 CDS NP_945419.1 39933143 2693070 69377..70015 1 NC_005296.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 70015 cmk 2693070 cmk Rhodopseudomonas palustris CGA009 cytidylate kinase NP_945419.1 69377 D 258594 CDS NP_945420.1 39933144 2688824 70316..72013 1 NC_005296.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 72013 rpsA 2688824 rpsA Rhodopseudomonas palustris CGA009 30S ribosomal protein S1 NP_945420.1 70316 D 258594 CDS NP_945421.1 39933145 2691270 72242..73222 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; signal peptide peptidase SppA 36K type 73222 sppA 2691270 sppA Rhodopseudomonas palustris CGA009 signal peptide peptidase SppA 36K type NP_945421.1 72242 D 258594 CDS NP_945422.1 39933146 2689117 73388..73702 1 NC_005296.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 73702 ihfB 2689117 ihfB Rhodopseudomonas palustris CGA009 integration host factor subunit beta NP_945422.1 73388 D 258594 CDS NP_945423.1 39933147 2689908 73740..74126 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 74126 2689908 RPA0067 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945423.1 73740 D 258594 CDS NP_945424.1 39933148 2689234 74185..74826 1 NC_005296.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 74826 trpF 2689234 trpF Rhodopseudomonas palustris CGA009 N-(5'-phosphoribosyl)anthranilate isomerase NP_945424.1 74185 D 258594 CDS NP_945425.1 39933149 2689187 74840..76054 1 NC_005296.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 76054 trpB 2689187 trpB Rhodopseudomonas palustris CGA009 tryptophan synthase subunit beta NP_945425.1 74840 D 258594 CDS NP_945426.1 39933150 2691358 76054..76890 1 NC_005296.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 76890 trpA 2691358 trpA Rhodopseudomonas palustris CGA009 tryptophan synthase subunit alpha NP_945426.1 76054 D 258594 CDS NP_945427.1 39933151 2689346 77000..77983 1 NC_005296.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 77983 accD 2689346 accD Rhodopseudomonas palustris CGA009 acetyl-CoA carboxylase subunit beta NP_945427.1 77000 D 258594 CDS NP_945428.1 39933152 2689629 77980..79308 1 NC_005296.1 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 79308 folC 2689629 folC Rhodopseudomonas palustris CGA009 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase NP_945428.1 77980 D 258594 CDS NP_945429.1 39933153 2689689 complement(79484..79804) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; thioredoxin 79804 trxA 2689689 trxA Rhodopseudomonas palustris CGA009 thioredoxin NP_945429.1 79484 R 258594 CDS NP_945430.1 39933154 2689579 complement(79901..83386) 1 NC_005296.1 UvrD/REP helicase 83386 2689579 RPA0074 Rhodopseudomonas palustris CGA009 UvrD/REP helicase NP_945430.1 79901 R 258594 CDS NP_945431.1 39933155 2688874 complement(83383..86532) 1 NC_005296.1 hypothetical protein 86532 2688874 RPA0075 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945431.1 83383 R 258594 CDS NP_945432.1 39933156 2691646 complement(86608..87330) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nucleotidyl transferase 87330 2691646 RPA0076 Rhodopseudomonas palustris CGA009 nucleotidyl transferase NP_945432.1 86608 R 258594 CDS NP_945433.1 39933157 2689299 complement(87488..87796) 1 NC_005296.1 hypothetical protein 87796 2689299 RPA0077 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945433.1 87488 R 258594 CDS NP_945434.1 39933158 2688776 complement(87900..89420) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 89420 2688776 RPA0078 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945434.1 87900 R 258594 CDS NP_945435.1 39933159 2689221 complement(89417..91963) 1 NC_005296.1 sensor histidine kinase 91963 2689221 RPA0079 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_945435.1 89417 R 258594 CDS NP_945436.1 39933160 2689183 complement(92150..92608) 1 NC_005296.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 92608 dut 2689183 dut Rhodopseudomonas palustris CGA009 deoxyuridine 5'-triphosphate nucleotidohydrolase NP_945436.1 92150 R 258594 CDS NP_945437.2 229220836 2689171 complement(92605..94050) 1 NC_005296.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; in the alphaproteobacteria, this protein contains an N-terminal SbtC-like domain; bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 94050 coaBC 2689171 coaBC Rhodopseudomonas palustris CGA009 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase NP_945437.2 92605 R 258594 CDS NP_945438.1 39933162 2689456 complement(94104..95681) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-polyprenylphenol 6-hydroxylase 95681 ubiB 2689456 ubiB Rhodopseudomonas palustris CGA009 2-polyprenylphenol 6-hydroxylase NP_945438.1 94104 R 258594 CDS NP_945439.1 39933163 2689442 complement(95678..96439) 1 NC_005296.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 96439 ubiE 2689442 ubiE Rhodopseudomonas palustris CGA009 ubiquinone/menaquinone biosynthesis methyltransferase NP_945439.1 95678 R 258594 CDS NP_945440.1 39933164 2689524 96685..97560 1 NC_005296.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 97560 mutM 2689524 mutM Rhodopseudomonas palustris CGA009 formamidopyrimidine-DNA glycosylase NP_945440.1 96685 D 258594 CDS NP_945441.1 39933165 2689517 complement(97588..98931) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidoglycan-binding domain 1 98931 2689517 RPA0085 Rhodopseudomonas palustris CGA009 peptidoglycan-binding domain 1 NP_945441.1 97588 R 258594 CDS NP_945442.1 39933166 2689673 99139..99939 1 NC_005296.1 molybdenum cofactor biosynthesis protein 99939 moeB 2689673 moeB Rhodopseudomonas palustris CGA009 molybdenum cofactor biosynthesis protein NP_945442.1 99139 D 258594 CDS NP_945443.1 39933167 2693100 100064..101752 1 NC_005296.1 major facilitator transporter 101752 2693100 RPA0087 Rhodopseudomonas palustris CGA009 major facilitator transporter NP_945443.1 100064 D 258594 CDS NP_945444.1 39933168 2689657 complement(101883..102101) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 102101 2689657 RPA0088 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945444.1 101883 R 258594 CDS NP_945445.1 39933169 2693095 complement(102225..102566) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 102566 2693095 RPA0089 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945445.1 102225 R 258594 CDS NP_945446.1 39933170 2689099 complement(102804..103208) 1 NC_005296.1 hypothetical protein 103208 2689099 RPA0090 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945446.1 102804 R 258594 CDS NP_945447.1 39933171 2691381 complement(103287..103628) 1 NC_005296.1 hypothetical protein 103628 2691381 RPA0091 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945447.1 103287 R 258594 CDS NP_945448.1 39933172 2689181 complement(104169..104444) 1 NC_005296.1 hypothetical protein 104444 2689181 RPA0092 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945448.1 104169 R 258594 CDS NP_945449.1 39933173 2689176 104575..105222 1 NC_005296.1 TetR family transcriptional regulator 105222 2689176 RPA0093 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_945449.1 104575 D 258594 CDS NP_945450.1 39933174 2689634 105219..106136 1 NC_005296.1 hypothetical protein 106136 2689634 RPA0094 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945450.1 105219 D 258594 CDS NP_945451.1 39933175 2689426 106266..107411 1 NC_005296.1 multidrug efflux membrane fusion protein 107411 2689426 RPA0095 Rhodopseudomonas palustris CGA009 multidrug efflux membrane fusion protein NP_945451.1 106266 D 258594 CDS NP_945452.1 39933176 2689465 107415..110564 1 NC_005296.1 multidrug-efflux transport protein 110564 2689465 RPA0096 Rhodopseudomonas palustris CGA009 multidrug-efflux transport protein NP_945452.1 107415 D 258594 CDS NP_945453.1 39933177 2689467 110707..111117 1 NC_005296.1 flagellar basal body rod protein FlgC 111117 2689467 RPA0097 Rhodopseudomonas palustris CGA009 flagellar basal body rod protein FlgC NP_945453.1 110707 D 258594 CDS NP_945454.1 39933178 2689466 complement(111260..112318) 1 NC_005296.1 oligopeptide ABC transporter ATP-binding protein 112318 oppF 2689466 oppF Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter ATP-binding protein NP_945454.1 111260 R 258594 CDS NP_945455.1 39933179 2692220 complement(112315..113313) 1 NC_005296.1 oligopeptide ABC transporter ATP-binding protein 113313 oppD 2692220 oppD Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter ATP-binding protein NP_945455.1 112315 R 258594 CDS NP_945456.1 39933180 2689175 complement(113316..114197) 1 NC_005296.1 ABC transporter permease 114197 oppC 2689175 oppC Rhodopseudomonas palustris CGA009 ABC transporter permease NP_945456.1 113316 R 258594 CDS NP_945457.1 39933181 2689468 complement(114221..115201) 1 NC_005296.1 dipeptide transport system permease 1 115201 oppB 2689468 oppB Rhodopseudomonas palustris CGA009 dipeptide transport system permease 1 NP_945457.1 114221 R 258594 CDS NP_945458.1 39933182 2689462 complement(115230..116831) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter oligopeptide-binding protein 116831 oppA 2689462 oppA Rhodopseudomonas palustris CGA009 ABC transporter oligopeptide-binding protein NP_945458.1 115230 R 258594 CDS NP_945459.1 39933183 2689200 complement(116921..117877) 1 NC_005296.1 cobalamin synthesis protein/P47K 117877 2689200 RPA0103 Rhodopseudomonas palustris CGA009 cobalamin synthesis protein/P47K NP_945459.1 116921 R 258594 CDS NP_945460.1 39933184 2689198 complement(117874..119517) 1 NC_005296.1 amidohydrolase 119517 2689198 RPA0104 Rhodopseudomonas palustris CGA009 amidohydrolase NP_945460.1 117874 R 258594 CDS NP_945461.1 39933185 2689179 119756..121297 1 NC_005296.1 transcriptional regulator 121297 2689179 RPA0105 Rhodopseudomonas palustris CGA009 transcriptional regulator NP_945461.1 119756 D 258594 CDS NP_945462.1 39933186 2689207 complement(121313..122521) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino-acid ABC transporter substrate-binding protein 122521 2689207 RPA0106 Rhodopseudomonas palustris CGA009 branched chain amino-acid ABC transporter substrate-binding protein NP_945462.1 121313 R 258594 CDS NP_945463.1 39933187 2689197 complement(122541..123581) 1 NC_005296.1 Zn-binding dehydrogenase 123581 2689197 RPA0107 Rhodopseudomonas palustris CGA009 Zn-binding dehydrogenase NP_945463.1 122541 R 258594 CDS NP_945464.1 39933188 2689235 complement(123611..125359) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; benzaldehyde lyase 125359 2689235 RPA0108 Rhodopseudomonas palustris CGA009 benzaldehyde lyase NP_945464.1 123611 R 258594 CDS NP_945465.1 39933189 2689210 complement(125400..126188) 1 NC_005296.1 3-oxoacyl-(acyl carrier protein) reductase 126188 2689210 RPA0109 Rhodopseudomonas palustris CGA009 3-oxoacyl-(acyl carrier protein) reductase NP_945465.1 125400 R 258594 CDS NP_945466.1 39933190 2689457 126389..127051 1 NC_005296.1 TetR family transcriptional regulator 127051 2689457 RPA0110 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_945466.1 126389 D 258594 CDS NP_945467.1 39933191 2689483 complement(127104..127892) 1 NC_005296.1 hypothetical protein 127892 2689483 RPA0111 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945467.1 127104 R 258594 CDS NP_945468.1 39933192 2689248 complement(127901..129412) 1 NC_005296.1 betaine aldehyde dehydrogenase 129412 betB 2689248 betB Rhodopseudomonas palustris CGA009 betaine aldehyde dehydrogenase NP_945468.1 127901 R 258594 CDS NP_945469.1 39933193 2689252 130028..131422 1 NC_005296.1 oxidoreductase 131422 2689252 RPA0113 Rhodopseudomonas palustris CGA009 oxidoreductase NP_945469.1 130028 D 258594 CDS NP_945470.1 39933194 2689266 complement(131546..131899) 1 NC_005296.1 hypothetical protein 131899 2689266 RPA0114 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945470.1 131546 R 258594 CDS NP_945471.1 39933195 2689267 133329..133886 1 NC_005296.1 dTDP-6-deoxy-D-glucose-3,5-epimerase 133886 rmlC 2689267 rmlC Rhodopseudomonas palustris CGA009 dTDP-6-deoxy-D-glucose-3,5-epimerase NP_945471.1 133329 D 258594 CDS NP_945472.1 39933196 2689619 133891..134784 1 NC_005296.1 dTDP-6-deoxy-L-mannose-dehydrogenase 134784 rmlD 2689619 rmlD Rhodopseudomonas palustris CGA009 dTDP-6-deoxy-L-mannose-dehydrogenase NP_945472.1 133891 D 258594 CDS NP_945473.1 39933197 2689674 134786..135661 1 NC_005296.1 glucose-1-phosphate thymidylyltransferase 135661 rmlA 2689674 rmlA Rhodopseudomonas palustris CGA009 glucose-1-phosphate thymidylyltransferase NP_945473.1 134786 D 258594 CDS NP_945474.1 39933198 2689287 136107..136643 1 NC_005296.1 hypothetical protein 136643 2689287 RPA0121 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945474.1 136107 D 258594 CDS NP_945475.1 39933199 2689300 136734..139013 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; bacteriophytochrome PhyB 139013 phyB3 2689300 phyB3 Rhodopseudomonas palustris CGA009 bacteriophytochrome PhyB NP_945475.1 136734 D 258594 CDS NP_945476.1 39933200 2688878 139006..140646 1 NC_005296.1 KTN NAD-binding domain-containing protein 140646 2688878 RPA0123 Rhodopseudomonas palustris CGA009 KTN NAD-binding domain-containing protein NP_945476.1 139006 D 258594 CDS NP_945477.1 39933201 2689514 complement(140653..141477) 1 NC_005296.1 3',5'-cyclic-nucleotide phosphodiesterase 141477 2689514 RPA0124 Rhodopseudomonas palustris CGA009 3',5'-cyclic-nucleotide phosphodiesterase NP_945477.1 140653 R 258594 CDS NP_945478.1 39933202 2693067 complement(141474..142298) 1 NC_005296.1 3',5'-cyclic-nucleotide phosphodiesterase 142298 2693067 RPA0125 Rhodopseudomonas palustris CGA009 3',5'-cyclic-nucleotide phosphodiesterase NP_945478.1 141474 R 258594 CDS NP_945479.1 39933203 2688814 complement(142363..143643) 1 NC_005296.1 sugar ABC transporter sugar binding protein 143643 2688814 RPA0126 Rhodopseudomonas palustris CGA009 sugar ABC transporter sugar binding protein NP_945479.1 142363 R 258594 CDS NP_945480.1 39933204 2689594 complement(143666..144502) 1 NC_005296.1 sugar ABC transporter permease 144502 2689594 RPA0127 Rhodopseudomonas palustris CGA009 sugar ABC transporter permease NP_945480.1 143666 R 258594 CDS NP_945481.1 39933205 2689439 complement(144499..145458) 1 NC_005296.1 sugar ABC transporter permease 145458 2689439 RPA0128 Rhodopseudomonas palustris CGA009 sugar ABC transporter permease NP_945481.1 144499 R 258594 CDS NP_945482.1 39933206 2689443 complement(145451..146605) 1 NC_005296.1 sugar ABC transporter substrate-binding protein 146605 2689443 RPA0129 Rhodopseudomonas palustris CGA009 sugar ABC transporter substrate-binding protein NP_945482.1 145451 R 258594 CDS NP_945483.1 39933207 2689445 146733..147611 1 NC_005296.1 LysR family transcriptional regulator 147611 2689445 RPA0130 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_945483.1 146733 D 258594 CDS NP_945484.1 39933208 2689142 complement(147617..148312) 1 NC_005296.1 sulfate ABC transporter ATP-binding protein 148312 2689142 RPA0131 Rhodopseudomonas palustris CGA009 sulfate ABC transporter ATP-binding protein NP_945484.1 147617 R 258594 CDS NP_945485.1 39933209 2689444 complement(148309..149082) 1 NC_005296.1 sulfonate ABC transporter permease 149082 2689444 RPA0132 Rhodopseudomonas palustris CGA009 sulfonate ABC transporter permease NP_945485.1 148309 R 258594 CDS NP_945486.1 39933210 2689052 complement(149072..150064) 1 NC_005296.1 sulfate ABC transporter periplasmic binding protein 150064 2689052 RPA0133 Rhodopseudomonas palustris CGA009 sulfate ABC transporter periplasmic binding protein NP_945486.1 149072 R 258594 CDS NP_945487.1 39933211 2689081 complement(150080..151939) 1 NC_005296.1 hydrogenase gamma-fused hydrogenase large and small subunit 151939 hydC 2689081 hydC Rhodopseudomonas palustris CGA009 hydrogenase gamma-fused hydrogenase large and small subunit NP_945487.1 150080 R 258594 CDS NP_945488.1 39933212 2689043 complement(151939..153960) 1 NC_005296.1 oxidoreductase 153960 2689043 RPA0135 Rhodopseudomonas palustris CGA009 oxidoreductase NP_945488.1 151939 R 258594 CDS NP_945489.1 39933213 2691347 complement(154100..155809) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 155809 2691347 RPA0136 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_945489.1 154100 R 258594 CDS NP_945490.1 39933214 2688818 complement(155814..156905) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis methylesterase CheB1 156905 cheB1 2688818 cheB1 Rhodopseudomonas palustris CGA009 chemotaxis methylesterase CheB1 NP_945490.1 155814 R 258594 CDS NP_945491.1 39933215 2688925 complement(156926..157768) 1 NC_005296.1 chemotaxis methyltransferase CheR1 157768 cheR1 2688925 cheR1 Rhodopseudomonas palustris CGA009 chemotaxis methyltransferase CheR1 NP_945491.1 156926 R 258594 CDS NP_945492.1 39933216 2691452 complement(157930..160131) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 160131 2691452 RPA0139 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_945492.1 157930 R 258594 CDS NP_945493.1 39933217 2689116 complement(160198..160686) 1 NC_005296.1 chemotaxis signal transduction/oligomerization protein CheW1-2 160686 cheW1-3 2689116 cheW1-3 Rhodopseudomonas palustris CGA009 chemotaxis signal transduction/oligomerization protein CheW1-2 NP_945493.1 160198 R 258594 CDS NP_945494.1 39933218 2689160 complement(160747..161217) 1 NC_005296.1 chemotaxis signal transduction/oligomerization protein CheW1-1 161217 cheW1-1 2689160 cheW1-1 Rhodopseudomonas palustris CGA009 chemotaxis signal transduction/oligomerization protein CheW1-1 NP_945494.1 160747 R 258594 CDS NP_945495.1 39933219 2691612 complement(161217..163283) 1 NC_005296.1 chemotaxis histidine kinase CheA 163283 cheA1 2691612 cheA1 Rhodopseudomonas palustris CGA009 chemotaxis histidine kinase CheA NP_945495.1 161217 R 258594 CDS NP_945496.1 39933220 2691487 complement(163280..163645) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; response regulator receiver CheY1 163645 cheY1 2691487 cheY1 Rhodopseudomonas palustris CGA009 response regulator receiver CheY1 NP_945496.1 163280 R 258594 CDS NP_945497.1 39933221 2691442 complement(163645..163968) 1 NC_005296.1 sulfate transporter 163968 2691442 RPA0144 Rhodopseudomonas palustris CGA009 sulfate transporter NP_945497.1 163645 R 258594 CDS NP_945498.1 39933222 2688797 164246..165412 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; metal dependent phosphohydrolase domain-containing protein 165412 2688797 RPA0145 Rhodopseudomonas palustris CGA009 metal dependent phosphohydrolase domain-containing protein NP_945498.1 164246 D 258594 CDS NP_945499.1 39933223 2688982 165452..165883 1 NC_005296.1 hypothetical protein 165883 2688982 RPA0146 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945499.1 165452 D 258594 CDS NP_945500.1 39933224 2688778 complement(165961..166752) 1 NC_005296.1 ModE family transcriptional regulator 166752 2688778 RPA0147 Rhodopseudomonas palustris CGA009 ModE family transcriptional regulator NP_945500.1 165961 R 258594 CDS NP_945501.1 39933225 2688787 complement(166873..167409) 1 NC_005296.1 hypothetical protein 167409 2688787 RPA0148 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945501.1 166873 R 258594 CDS NP_945502.1 39933226 2688784 complement(167433..168227) 1 NC_005296.1 iron ABC transporter ATP-binding protein 168227 2688784 RPA0149 Rhodopseudomonas palustris CGA009 iron ABC transporter ATP-binding protein NP_945502.1 167433 R 258594 CDS NP_945503.1 39933227 2688780 complement(168224..169246) 1 NC_005296.1 iron ABC transporter permease 169246 2688780 RPA0150 Rhodopseudomonas palustris CGA009 iron ABC transporter permease NP_945503.1 168224 R 258594 CDS NP_945504.1 39933228 2688772 complement(169248..170297) 1 NC_005296.1 iron ABC transporter periplasmic binding protein 170297 2688772 RPA0151 Rhodopseudomonas palustris CGA009 iron ABC transporter periplasmic binding protein NP_945504.1 169248 R 258594 CDS NP_945505.1 39933229 2688757 complement(170294..170797) 1 NC_005296.1 hypothetical protein 170797 2688757 RPA0152 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945505.1 170294 R 258594 CDS NP_945506.1 39933230 2688845 171435..173618 1 NC_005296.1 outer membrane receptor for Fe transport 173618 2688845 RPA0153 Rhodopseudomonas palustris CGA009 outer membrane receptor for Fe transport NP_945506.1 171435 D 258594 CDS NP_945507.1 39933231 2689878 173675..174313 1 NC_005296.1 MotA/TolQ/ExbB proton channel family protein 174313 2689878 RPA0154 Rhodopseudomonas palustris CGA009 MotA/TolQ/ExbB proton channel family protein NP_945507.1 173675 D 258594 CDS NP_945508.1 39933232 2689861 174326..174793 1 NC_005296.1 tolR/exbD protein 174793 2689861 RPA0155 Rhodopseudomonas palustris CGA009 tolR/exbD protein NP_945508.1 174326 D 258594 CDS NP_945509.1 39933233 2689863 174790..175608 1 NC_005296.1 tonB like protein 175608 2689863 RPA0156 Rhodopseudomonas palustris CGA009 tonB like protein NP_945509.1 174790 D 258594 CDS NP_945510.1 39933234 2689859 complement(175963..177126) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 177126 2689859 RPA0157 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945510.1 175963 R 258594 CDS NP_945511.1 39933235 2689338 177448..177828 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 50S ribosomal protein L21 177828 rplU 2689338 rplU Rhodopseudomonas palustris CGA009 50S ribosomal protein L21 NP_945511.1 177448 D 258594 CDS NP_945512.1 39933236 2689406 177918..178190 1 NC_005296.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 178190 rpmA 2689406 rpmA Rhodopseudomonas palustris CGA009 50S ribosomal protein L27 NP_945512.1 177918 D 258594 CDS NP_945513.1 39933237 2693144 178325..178924 1 NC_005296.1 N-acetyltransferase GCN5 178924 2693144 RPA0160 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_945513.1 178325 D 258594 CDS NP_945514.1 39933238 2693146 complement(179631..180536) 1 NC_005296.1 DMT family permease 180536 2693146 RPA0161 Rhodopseudomonas palustris CGA009 DMT family permease NP_945514.1 179631 R 258594 CDS NP_945515.1 39933239 2689349 180688..181749 1 NC_005296.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 181749 obgE 2689349 obgE Rhodopseudomonas palustris CGA009 GTPase ObgE NP_945515.1 180688 D 258594 CDS NP_945516.1 39933240 2693137 181888..183018 1 NC_005296.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 183018 proB 2693137 proB Rhodopseudomonas palustris CGA009 gamma-glutamyl kinase NP_945516.1 181888 D 258594 CDS NP_945517.1 39933241 2693140 183222..184514 1 NC_005296.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 184514 proA 2693140 proA Rhodopseudomonas palustris CGA009 gamma-glutamyl phosphate reductase NP_945517.1 183222 D 258594 CDS NP_945518.1 39933242 2689356 184539..185168 1 NC_005296.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 185168 nadD 2689356 nadD Rhodopseudomonas palustris CGA009 nicotinic acid mononucleotide adenylyltransferase NP_945518.1 184539 D 258594 CDS NP_945519.1 39933243 2689639 185539..185835 1 NC_005296.1 Iojap-like protein 185835 2689639 RPA0166 Rhodopseudomonas palustris CGA009 Iojap-like protein NP_945519.1 185539 D 258594 CDS NP_945520.1 39933244 2689339 185925..186407 1 NC_005296.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 186407 2689339 RPA0167 Rhodopseudomonas palustris CGA009 rRNA large subunit methyltransferase NP_945520.1 185925 D 258594 CDS NP_945521.1 39933245 2689642 186427..187818 1 NC_005296.1 peptidase M23B 187818 2689642 RPA0168 Rhodopseudomonas palustris CGA009 peptidase M23B NP_945521.1 186427 D 258594 CDS NP_945522.1 39933246 2689666 187815..189191 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carboxyl-terminal protease 189191 ctpA 2689666 ctpA Rhodopseudomonas palustris CGA009 carboxyl-terminal protease NP_945522.1 187815 D 258594 CDS NP_945523.1 39933247 2689698 189342..190580 1 NC_005296.1 hypothetical protein 190580 2689698 RPA0170 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945523.1 189342 D 258594 CDS NP_945524.1 39933248 2689297 190619..191125 1 NC_005296.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 191125 invA1 2689297 invA1 Rhodopseudomonas palustris CGA009 dinucleoside polyphosphate hydrolase NP_945524.1 190619 D 258594 CDS NP_945525.1 39933249 2689694 complement(191262..192332) 1 NC_005296.1 hypothetical protein 192332 2689694 RPA0172 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945525.1 191262 R 258594 CDS NP_945526.1 39933250 2689298 192604..193551 1 NC_005296.1 sugar nucleotide dehydratase 193551 2689298 RPA0173 Rhodopseudomonas palustris CGA009 sugar nucleotide dehydratase NP_945526.1 192604 D 258594 CDS NP_945527.1 39933251 2689633 193548..194069 1 NC_005296.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 194069 invA2 2689633 invA2 Rhodopseudomonas palustris CGA009 dinucleoside polyphosphate hydrolase NP_945527.1 193548 D 258594 CDS NP_945528.1 39933252 2688875 complement(194253..194660) 1 NC_005296.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit epsilon 194660 atpC 2688875 atpC Rhodopseudomonas palustris CGA009 ATP synthase F0F1 subunit epsilon NP_945528.1 194253 R 258594 CDS NP_945529.1 39933253 2689685 complement(194774..196204) 1 NC_005296.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 196204 atpD 2689685 atpD Rhodopseudomonas palustris CGA009 ATP synthase F0F1 subunit beta NP_945529.1 194774 R 258594 CDS NP_945530.1 39933254 2689295 complement(196276..197151) 1 NC_005296.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 197151 atpG 2689295 atpG Rhodopseudomonas palustris CGA009 ATP synthase F0F1 subunit gamma NP_945530.1 196276 R 258594 CDS NP_945531.1 39933255 2689421 complement(197295..198827) 1 NC_005296.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 198827 atpA 2689421 atpA Rhodopseudomonas palustris CGA009 ATP synthase F0F1 subunit alpha NP_945531.1 197295 R 258594 CDS NP_945532.1 39933256 2689332 complement(198827..199387) 1 NC_005296.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 199387 atpH 2689332 atpH Rhodopseudomonas palustris CGA009 ATP synthase F0F1 subunit delta NP_945532.1 198827 R 258594 CDS NP_945533.1 39933257 2691377 200091..200561 1 NC_005296.1 rare lipoprotein A 200561 rlpA1 2691377 rlpA1 Rhodopseudomonas palustris CGA009 rare lipoprotein A NP_945533.1 200091 D 258594 CDS NP_945534.1 39933258 2689627 complement(200717..202927) 1 NC_005296.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 202927 priA 2689627 priA Rhodopseudomonas palustris CGA009 primosome assembly protein PriA NP_945534.1 200717 R 258594 CDS NP_945535.1 39933259 2691383 202981..204096 1 NC_005296.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 204096 xerC 2691383 xerC Rhodopseudomonas palustris CGA009 site-specific tyrosine recombinase XerC NP_945535.1 202981 D 258594 CDS NP_945536.1 39933260 2689331 204237..204827 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 204827 2689331 RPA0183 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945536.1 204237 D 258594 CDS NP_945537.1 39933261 2689625 complement(204891..205433) 1 NC_005296.1 hypothetical protein 205433 2689625 RPA0184 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945537.1 204891 R 258594 CDS NP_945538.1 39933262 2691378 complement(205473..206876) 1 NC_005296.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 206876 dldH 2691378 dldH Rhodopseudomonas palustris CGA009 dihydrolipoamide dehydrogenase NP_945538.1 205473 R 258594 CDS NP_945539.1 39933263 2691360 complement(206908..207654) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 207654 2691360 RPA0186 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_945539.1 206908 R 258594 CDS NP_945540.1 39933264 2689825 complement(207662..208111) 1 NC_005296.1 hypothetical protein 208111 2689825 RPA0187 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945540.1 207662 R 258594 CDS NP_945541.1 39933265 2689502 complement(208123..209376) 1 NC_005296.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 209376 sucB 2689502 sucB Rhodopseudomonas palustris CGA009 dihydrolipoamide succinyltransferase NP_945541.1 208123 R 258594 CDS NP_945542.1 39933266 2691665 complement(209481..212438) 1 NC_005296.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 212438 sucA 2691665 sucA Rhodopseudomonas palustris CGA009 2-oxoglutarate dehydrogenase E1 component NP_945542.1 209481 R 258594 CDS NP_945543.1 39933267 2693104 complement(212566..213450) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; succinyl-CoA synthetase subunit alpha 213450 sucD 2693104 sucD Rhodopseudomonas palustris CGA009 succinyl-CoA synthetase subunit alpha NP_945543.1 212566 R 258594 CDS NP_945544.1 39933268 2691664 complement(213515..214711) 1 NC_005296.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 214711 sucC 2691664 sucC Rhodopseudomonas palustris CGA009 succinyl-CoA synthetase subunit beta NP_945544.1 213515 R 258594 CDS NP_945545.1 39933269 2691678 complement(214807..215775) 1 NC_005296.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 215775 mdh 2691678 mdh Rhodopseudomonas palustris CGA009 malate dehydrogenase NP_945545.1 214807 R 258594 CDS NP_945546.1 39933270 2689637 complement(215921..217105) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; AFG1-like ATPase 217105 2689637 RPA0193 Rhodopseudomonas palustris CGA009 AFG1-like ATPase NP_945546.1 215921 R 258594 CDS NP_945547.1 39933271 2689942 complement(217188..217727) 1 NC_005296.1 2'-5' RNA ligase 217727 2689942 RPA0194 Rhodopseudomonas palustris CGA009 2'-5' RNA ligase NP_945547.1 217188 R 258594 CDS NP_945548.1 39933272 2689499 complement(217933..218601) 1 NC_005296.1 acyl-CoA thioesterase 218601 tesA 2689499 tesA Rhodopseudomonas palustris CGA009 acyl-CoA thioesterase NP_945548.1 217933 R 258594 CDS NP_945549.1 39933273 2689508 218627..219370 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter ATP-binding protein 219370 2689508 RPA0196 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_945549.1 218627 D 258594 CDS NP_945550.1 39933274 2689819 219374..221944 1 NC_005296.1 hypothetical protein 221944 2689819 RPA0197 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945550.1 219374 D 258594 CDS NP_945551.1 39933275 2692868 222285..223076 1 NC_005296.1 acetate transporter 223076 2692868 RPA0198 Rhodopseudomonas palustris CGA009 acetate transporter NP_945551.1 222285 D 258594 CDS NP_945552.1 39933276 2689095 223231..223761 1 NC_005296.1 N-acetyltransferase GCN5 223761 2689095 RPA0199 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_945552.1 223231 D 258594 CDS NP_945553.1 39933277 2689662 complement(223821..224189) 1 NC_005296.1 hypothetical protein 224189 2689662 RPA0200 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945553.1 223821 R 258594 CDS NP_945554.1 39933278 2691662 complement(224593..225468) 1 NC_005296.1 hypothetical protein 225468 2691662 RPA0201 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945554.1 224593 R 258594 CDS NP_945555.1 39933279 2689661 complement(225515..228232) 1 NC_005296.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 228232 acnA 2689661 acnA Rhodopseudomonas palustris CGA009 aconitate hydratase NP_945555.1 225515 R 258594 CDS NP_945556.1 39933280 2693119 228448..229050 1 NC_005296.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 229050 cycV 2693119 cycV Rhodopseudomonas palustris CGA009 cytochrome c biogenesis protein CcmA NP_945556.1 228448 D 258594 CDS NP_945557.1 39933281 2689488 229047..229715 1 NC_005296.1 heme exporter protein CcmB 229715 cycW 2689488 cycW Rhodopseudomonas palustris CGA009 heme exporter protein CcmB NP_945557.1 229047 D 258594 CDS NP_945558.1 39933282 2689822 229808..230542 1 NC_005296.1 heme exporter protein CcmC 230542 cycZ 2689822 cycZ Rhodopseudomonas palustris CGA009 heme exporter protein CcmC NP_945558.1 229808 D 258594 CDS NP_945559.1 39933283 2689497 230732..231328 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; periplasmic protein thiol-disulfide oxidoreductase DsbE 231328 cycY 2689497 cycY Rhodopseudomonas palustris CGA009 periplasmic protein thiol-disulfide oxidoreductase DsbE NP_945559.1 230732 D 258594 CDS NP_945560.1 39933284 2689420 231468..231866 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 231866 2689420 RPA0207 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945560.1 231468 D 258594 CDS NP_945561.1 39933285 2689492 complement(231999..232616) 1 NC_005296.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 232616 ispZ 2689492 ispZ Rhodopseudomonas palustris CGA009 intracellular septation protein A NP_945561.1 231999 R 258594 CDS NP_945562.1 39933286 2689658 complement(232613..233560) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; signal recognition particle-docking protein FtsY 233560 ftsY 2689658 ftsY Rhodopseudomonas palustris CGA009 signal recognition particle-docking protein FtsY NP_945562.1 232613 R 258594 CDS NP_945563.1 39933287 2693107 233589..234563 1 NC_005296.1 pseudouridine synthase 234563 2693107 RPA0210 Rhodopseudomonas palustris CGA009 pseudouridine synthase NP_945563.1 233589 D 258594 CDS NP_945564.1 39933288 2693110 234927..236879 1 NC_005296.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 236879 2693110 RPA0211 Rhodopseudomonas palustris CGA009 acetyl-CoA synthetase NP_945564.1 234927 D 258594 CDS NP_945565.1 39933289 2691670 237262..237789 1 NC_005296.1 ErfK/YbiS/YcfS/YnhG protein 237789 2691670 RPA0212 Rhodopseudomonas palustris CGA009 ErfK/YbiS/YcfS/YnhG protein NP_945565.1 237262 D 258594 CDS NP_945566.1 39933290 2689818 complement(237864..239933) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; OmpA family protein 239933 2689818 RPA0213 Rhodopseudomonas palustris CGA009 OmpA family protein NP_945566.1 237864 R 258594 CDS NP_945567.1 39933291 2689659 complement(240179..240436) 1 NC_005296.1 hypothetical protein 240436 2689659 RPA0214 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945567.1 240179 R 258594 CDS NP_945568.1 39933292 2689101 complement(240436..240924) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; general stress protein 26 240924 2689101 RPA0215 Rhodopseudomonas palustris CGA009 general stress protein 26 NP_945568.1 240436 R 258594 CDS NP_945569.1 39933293 2689820 complement(241162..241944) 1 NC_005296.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 241944 sdhB 2689820 sdhB Rhodopseudomonas palustris CGA009 succinate dehydrogenase iron-sulfur subunit NP_945569.1 241162 R 258594 CDS NP_945570.1 39933294 2693111 complement(242052..243875) 1 NC_005296.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 243875 sdhA 2693111 sdhA Rhodopseudomonas palustris CGA009 succinate dehydrogenase flavoprotein subunit NP_945570.1 242052 R 258594 CDS NP_945571.1 39933295 2689102 complement(243879..244292) 1 NC_005296.1 succinate dehydrogenase cytochrome b subunit 244292 sdhD 2689102 sdhD Rhodopseudomonas palustris CGA009 succinate dehydrogenase cytochrome b subunit NP_945571.1 243879 R 258594 CDS NP_945572.1 39933296 2689491 complement(244289..244687) 1 NC_005296.1 succinate dehydrogenase cytochrome b subunit 244687 sdhC 2689491 sdhC Rhodopseudomonas palustris CGA009 succinate dehydrogenase cytochrome b subunit NP_945572.1 244289 R 258594 CDS NP_945573.1 39933297 2693101 245070..246014 1 NC_005296.1 cation diffusion facilitator family transporter 246014 czcD 2693101 czcD Rhodopseudomonas palustris CGA009 cation diffusion facilitator family transporter NP_945573.1 245070 D 258594 CDS NP_945574.1 39933298 2693106 complement(246248..247759) 1 NC_005296.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 247759 matB 2693106 matB Rhodopseudomonas palustris CGA009 malonyl-CoA synthase NP_945574.1 246248 R 258594 CDS NP_945575.1 39933299 2691668 248034..248609 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-Ig-H3/fasciclin domain-containing protein 248609 2691668 RPA0222 Rhodopseudomonas palustris CGA009 beta-Ig-H3/fasciclin domain-containing protein NP_945575.1 248034 D 258594 CDS NP_945576.1 39933300 2691666 248831..249469 1 NC_005296.1 hypothetical protein 249469 2691666 RPA0223 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945576.1 248831 D 258594 CDS NP_945577.1 39933301 2689804 249585..250364 1 NC_005296.1 twin-arginine translocation pathway signal 250364 2689804 RPA0224 Rhodopseudomonas palustris CGA009 twin-arginine translocation pathway signal NP_945577.1 249585 D 258594 CDS NP_945578.1 39933302 2689498 250637..251155 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; superoxide dismutase 251155 sodC 2689498 sodC Rhodopseudomonas palustris CGA009 superoxide dismutase NP_945578.1 250637 D 258594 CDS NP_945579.1 39933303 2689801 complement(251299..252486) 1 NC_005296.1 major facilitator transporter 252486 2689801 RPA0226 Rhodopseudomonas palustris CGA009 major facilitator transporter NP_945579.1 251299 R 258594 CDS NP_945580.1 39933304 2691669 252707..253819 1 NC_005296.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 253819 leuB 2691669 leuB Rhodopseudomonas palustris CGA009 3-isopropylmalate dehydrogenase NP_945580.1 252707 D 258594 CDS NP_945581.1 39933305 2689823 complement(253976..254377) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 254377 2689823 RPA0228 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945581.1 253976 R 258594 CDS NP_945582.1 39933306 2693103 complement(254521..255330) 1 NC_005296.1 hypothetical protein 255330 2693103 RPA0229 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945582.1 254521 R 258594 CDS NP_945583.1 39933307 2691371 255445..256479 1 NC_005296.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 256479 asdB 2691371 asdB Rhodopseudomonas palustris CGA009 aspartate-semialdehyde dehydrogenase NP_945583.1 255445 D 258594 CDS NP_945584.1 39933308 2689326 256615..257169 1 NC_005296.1 hypothetical protein 257169 2689326 RPA0231 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945584.1 256615 D 258594 CDS NP_945585.1 39933309 2689400 complement(257321..257965) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbonate dehydratase 257965 2689400 RPA0232 Rhodopseudomonas palustris CGA009 carbonate dehydratase NP_945585.1 257321 R 258594 CDS NP_945586.1 39933310 2689478 258147..259025 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Citryl-CoA lyase 259025 2689478 RPA0233 Rhodopseudomonas palustris CGA009 Citryl-CoA lyase NP_945586.1 258147 D 258594 CDS NP_945587.1 39933311 2689602 complement(259203..260894) 1 NC_005296.1 methyl-accepting chemotaxis receptor/sensory transducer 260894 2689602 RPA0234 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_945587.1 259203 R 258594 CDS NP_945588.1 39933312 2689587 complement(261643..262248) 1 NC_005296.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 262248 leuD 2689587 leuD Rhodopseudomonas palustris CGA009 isopropylmalate isomerase small subunit NP_945588.1 261643 R 258594 CDS NP_945589.1 39933313 2689476 complement(262334..262747) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 262747 2689476 RPA0236 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945589.1 262334 R 258594 CDS NP_945590.1 39933314 2689473 263432..263716 1 NC_005296.1 hypothetical protein 263716 2689473 RPA0237 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945590.1 263432 D 258594 CDS NP_945591.1 39933315 2689679 263816..264139 1 NC_005296.1 hypothetical protein 264139 2689679 RPA0238 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945591.1 263816 D 258594 CDS NP_945592.1 39933316 2693126 264260..264946 1 NC_005296.1 hypothetical protein 264946 2693126 RPA0239 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945592.1 264260 D 258594 CDS NP_945593.1 39933317 2691675 complement(265013..266422) 1 NC_005296.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 266422 leuC 2691675 leuC Rhodopseudomonas palustris CGA009 isopropylmalate isomerase large subunit NP_945593.1 265013 R 258594 CDS NP_945594.1 39933318 2689323 complement(266732..267121) 1 NC_005296.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 267121 rplS 2689323 rplS Rhodopseudomonas palustris CGA009 50S ribosomal protein L19 NP_945594.1 266732 R 258594 CDS NP_945595.1 39933319 2689318 complement(267235..267981) 1 NC_005296.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 267981 trmD 2689318 trmD Rhodopseudomonas palustris CGA009 tRNA (guanine-N(1)-)-methyltransferase NP_945595.1 267235 R 258594 CDS NP_945596.1 39933320 2689692 complement(268124..268654) 1 NC_005296.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 268654 rimM 2689692 rimM Rhodopseudomonas palustris CGA009 16S rRNA-processing protein RimM NP_945596.1 268124 R 258594 CDS NP_945597.1 39933321 2689313 complement(268667..268987) 1 NC_005296.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 268987 rpsP 2689313 rpsP Rhodopseudomonas palustris CGA009 30S ribosomal protein S16 NP_945597.1 268667 R 258594 CDS NP_945598.1 39933322 2689308 complement(269157..270707) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; signal recognition particle protein 270707 ffh/ftsY 2689308 ffh/ftsY Rhodopseudomonas palustris CGA009 signal recognition particle protein NP_945598.1 269157 R 258594 CDS NP_945599.1 39933323 2691379 271220..271591 1 NC_005296.1 twitching motility protein PilT 271591 2691379 RPA0246 Rhodopseudomonas palustris CGA009 twitching motility protein PilT NP_945599.1 271220 D 258594 CDS NP_945600.1 39933324 2691653 271596..272657 1 NC_005296.1 outer membrane protein 272657 romA 2691653 romA Rhodopseudomonas palustris CGA009 outer membrane protein NP_945600.1 271596 D 258594 CDS NP_945601.1 39933325 2691651 complement(272667..273365) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 273365 bp26 2691651 bp26 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945601.1 272667 R 258594 CDS NP_945602.1 39933326 2689306 complement(273362..274144) 1 NC_005296.1 transcription activator effector binding 274144 2689306 RPA0249 Rhodopseudomonas palustris CGA009 transcription activator effector binding NP_945602.1 273362 R 258594 CDS NP_945603.1 39933327 2689289 274381..275262 1 NC_005296.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 275262 dapF 2689289 dapF Rhodopseudomonas palustris CGA009 diaminopimelate epimerase NP_945603.1 274381 D 258594 CDS NP_945604.1 39933328 2689288 275262..276533 1 NC_005296.1 MiaB-like tRNA modifying enzyme 276533 2689288 RPA0251 Rhodopseudomonas palustris CGA009 MiaB-like tRNA modifying enzyme NP_945604.1 275262 D 258594 CDS NP_945605.1 39933329 2689283 complement(276543..277205) 1 NC_005296.1 hypothetical protein 277205 2689283 RPA0252 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945605.1 276543 R 258594 CDS NP_945606.1 39933330 2688775 complement(277390..277803) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 277803 2688775 RPA0253 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945606.1 277390 R 258594 CDS NP_945607.1 39933331 2689275 complement(277806..278795) 1 NC_005296.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 278795 gpsA 2689275 gpsA Rhodopseudomonas palustris CGA009 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase NP_945607.1 277806 R 258594 CDS NP_945608.1 39933332 2688781 complement(278831..280000) 1 NC_005296.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 280000 gcp 2688781 gcp Rhodopseudomonas palustris CGA009 DNA-binding/iron metalloprotein/AP endonuclease NP_945608.1 278831 R 258594 CDS NP_945609.1 39933333 2688846 280147..280893 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; uroporphyrinogen III synthase HEM4 280893 2688846 RPA0256 Rhodopseudomonas palustris CGA009 uroporphyrinogen III synthase HEM4 NP_945609.1 280147 D 258594 CDS NP_945610.1 39933334 2689103 280945..282354 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 282354 2689103 RPA0257 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945610.1 280945 D 258594 CDS NP_945611.1 39933335 2688777 282363..284060 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; HemY-like 284060 2688777 RPA0258 Rhodopseudomonas palustris CGA009 HemY-like NP_945611.1 282363 D 258594 CDS NP_945612.1 39933336 2689856 complement(284749..285531) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; transmembrane sensor protein 285531 2689856 RPA0259 Rhodopseudomonas palustris CGA009 transmembrane sensor protein NP_945612.1 284749 R 258594 CDS NP_945613.1 39933337 2688762 286170..287165 1 NC_005296.1 AppA/PpaA family photosynthesis gene regulator 287165 2688762 RPA0260 Rhodopseudomonas palustris CGA009 AppA/PpaA family photosynthesis gene regulator NP_945613.1 286170 D 258594 CDS NP_945614.1 39933338 2689244 287243..288424 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 288424 2689244 RPA0261 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945614.1 287243 D 258594 CDS NP_945615.1 39933339 2689874 complement(288452..289750) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ribulose bisphosphate carboxylase-like protein 289750 rlp2 2689874 rlp2 Rhodopseudomonas palustris CGA009 ribulose bisphosphate carboxylase-like protein NP_945615.1 288452 R 258594 CDS NP_945616.1 39933340 2689877 complement(289865..290287) 1 NC_005296.1 hypothetical protein 290287 2689877 RPA0263 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945616.1 289865 R 258594 CDS NP_945617.1 39933341 2689224 290514..292451 1 NC_005296.1 O-antigen acetylase 292451 2689224 RPA0264 Rhodopseudomonas palustris CGA009 O-antigen acetylase NP_945617.1 290514 D 258594 CDS NP_945618.1 39933342 2689872 complement(292504..293670) 1 NC_005296.1 alginate o-acetyltransferase AlgJ 293670 algJ 2689872 algJ Rhodopseudomonas palustris CGA009 alginate o-acetyltransferase AlgJ NP_945618.1 292504 R 258594 CDS NP_945619.1 39933343 2689217 complement(293673..295085) 1 NC_005296.1 alginate o-acetyltransferase AlgI 295085 2689217 RPA0266 Rhodopseudomonas palustris CGA009 alginate o-acetyltransferase AlgI NP_945619.1 293673 R 258594 CDS NP_945620.1 39933344 2689854 295679..296599 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; thioredoxin 296599 trx 2689854 trx Rhodopseudomonas palustris CGA009 thioredoxin NP_945620.1 295679 D 258594 CDS NP_945621.1 39933345 2689209 296626..297303 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Lon family ATP-dependent protease 297303 2689209 RPA0268 Rhodopseudomonas palustris CGA009 Lon family ATP-dependent protease NP_945621.1 296626 D 258594 CDS NP_945622.1 39933346 2689203 297393..297590 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 297590 2689203 RPA0269 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945622.1 297393 D 258594 CDS NP_945623.1 39933347 2689628 complement(297726..299087) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-octaprenyl-6-methoxyphenyl hydroxylase 299087 ubiH 2689628 ubiH Rhodopseudomonas palustris CGA009 2-octaprenyl-6-methoxyphenyl hydroxylase NP_945623.1 297726 R 258594 CDS NP_945624.1 39933348 2689416 299186..300061 1 NC_005296.1 Citation: Kuveret et al. (1995) J. Arch. Microbiol. 164:337-345; acyl-CoA thioesterase 300061 tesB 2689416 tesB Rhodopseudomonas palustris CGA009 acyl-CoA thioesterase NP_945624.1 299186 D 258594 CDS NP_945625.1 39933349 2689398 300253..300591 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; GlnK nitrogen regulatory protein P-II 300591 glnK1 2689398 glnK1 Rhodopseudomonas palustris CGA009 GlnK nitrogen regulatory protein P-II NP_945625.1 300253 D 258594 CDS NP_945626.1 39933350 2689410 300666..301997 1 NC_005296.1 ammonium transporter AmtB 301997 amtB1 2689410 amtB1 Rhodopseudomonas palustris CGA009 ammonium transporter AmtB NP_945626.1 300666 D 258594 CDS NP_945627.1 39933351 2689405 302307..302645 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; GlnK nitrogen regulatory protein P-II 302645 glnK2 2689405 glnK2 Rhodopseudomonas palustris CGA009 GlnK nitrogen regulatory protein P-II NP_945627.1 302307 D 258594 CDS NP_945628.1 39933352 2689199 302683..304125 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ammonium transporter 304125 amtB2 2689199 amtB2 Rhodopseudomonas palustris CGA009 ammonium transporter NP_945628.1 302683 D 258594 CDS NP_945629.1 39933353 2689192 304243..304590 1 NC_005296.1 PAP/25A core/DNA polymerase beta-like domain-containing protein 304590 2689192 RPA0276 Rhodopseudomonas palustris CGA009 PAP/25A core/DNA polymerase beta-like domain-containing protein NP_945629.1 304243 D 258594 CDS NP_945630.1 39933354 2689190 304743..304937 1 NC_005296.1 hypothetical protein 304937 2689190 RPA0277 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945630.1 304743 D 258594 CDS NP_945631.1 39933355 2689185 304991..306286 1 NC_005296.1 class I/II aminotransferase 306286 2689185 RPA0278 Rhodopseudomonas palustris CGA009 class I/II aminotransferase NP_945631.1 304991 D 258594 CDS NP_945632.1 39933356 2689334 306300..308768 1 NC_005296.1 DNA translocase FtsK 308768 2689334 RPA0279 Rhodopseudomonas palustris CGA009 DNA translocase FtsK NP_945632.1 306300 D 258594 CDS NP_945633.1 39933357 2689705 308786..309727 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane lipoprotein carrier protein LolA 309727 2689705 RPA0280 Rhodopseudomonas palustris CGA009 outer membrane lipoprotein carrier protein LolA NP_945633.1 308786 D 258594 CDS NP_945634.1 39933358 2693142 310015..310827 1 NC_005296.1 exodeoxyribonuclease III 310827 xthA1 2693142 xthA1 Rhodopseudomonas palustris CGA009 exodeoxyribonuclease III NP_945634.1 310015 D 258594 CDS NP_945635.1 39933359 2689471 complement(310879..311328) 1 NC_005296.1 cyclic nucleotide binding protein 311328 2689471 RPA0282 Rhodopseudomonas palustris CGA009 cyclic nucleotide binding protein NP_945635.1 310879 R 258594 CDS NP_945636.1 39933360 2689464 complement(311368..312054) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; two-component transcriptional regulator 312054 2689464 RPA0283 Rhodopseudomonas palustris CGA009 two-component transcriptional regulator NP_945636.1 311368 R 258594 CDS NP_945637.1 39933361 2689359 312219..312782 1 NC_005296.1 hypothetical protein 312782 2689359 RPA0284 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945637.1 312219 D 258594 CDS NP_945638.1 39933362 2689460 complement(312863..313522) 1 NC_005296.1 hypothetical protein 313522 2689460 RPA0285 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945638.1 312863 R 258594 CDS NP_945639.1 39933363 2689354 313693..315366 1 NC_005296.1 diguanylate cyclase 315366 2689354 RPA0286 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_945639.1 313693 D 258594 CDS NP_945640.1 39933364 2689342 315572..318202 1 NC_005296.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 318202 leuS 2689342 leuS Rhodopseudomonas palustris CGA009 leucyl-tRNA synthetase NP_945640.1 315572 D 258594 CDS NP_945641.1 39933365 2688877 318189..318752 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 318752 2688877 RPA0288 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945641.1 318189 D 258594 CDS NP_945642.1 39933366 2689449 318809..319840 1 NC_005296.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 319840 holA 2689449 holA Rhodopseudomonas palustris CGA009 DNA polymerase III subunit delta NP_945642.1 318809 D 258594 CDS NP_945643.1 39933367 2689648 complement(320082..320321) 1 NC_005296.1 hypothetical protein 320321 2689648 RPA0290 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945643.1 320082 R 258594 CDS NP_945644.1 39933368 2689436 complement(320345..321235) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; parB-like partition proteins 321235 parB1 2689436 parB1 Rhodopseudomonas palustris CGA009 parB-like partition proteins NP_945644.1 320345 R 258594 CDS NP_945645.1 39933369 2689529 complement(321408..322262) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cobyrinic acid a,c-diamide synthase 322262 parA 2689529 parA Rhodopseudomonas palustris CGA009 cobyrinic acid a,c-diamide synthase NP_945645.1 321408 R 258594 CDS NP_945646.1 39933370 2691376 complement(322290..322961) 1 NC_005296.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 322961 gidB 2691376 gidB Rhodopseudomonas palustris CGA009 16S rRNA methyltransferase GidB NP_945646.1 322290 R 258594 CDS NP_945647.1 39933371 2689621 complement(323133..325073) 1 NC_005296.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 325073 gidA 2689621 gidA Rhodopseudomonas palustris CGA009 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA NP_945647.1 323133 R 258594 CDS NP_945648.1 39933372 2689522 complement(325167..326492) 1 NC_005296.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 326492 trmE 2689522 trmE Rhodopseudomonas palustris CGA009 tRNA modification GTPase TrmE NP_945648.1 325167 R 258594 CDS NP_945649.1 39933373 2689518 complement(326580..327845) 1 NC_005296.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 327845 rho 2689518 rho Rhodopseudomonas palustris CGA009 transcription termination factor Rho NP_945649.1 326580 R 258594 CDS NP_945650.1 39933374 2689676 complement(328106..328558) 1 NC_005296.1 hypothetical protein 328558 2689676 RPA0297 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945650.1 328106 R 258594 CDS NP_945651.1 39933375 2689667 329001..329840 1 NC_005296.1 hypothetical protein 329840 2689667 RPA0298 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945651.1 329001 D 258594 CDS NP_945652.1 39933376 2689431 329837..330445 1 NC_005296.1 maf protein 330445 maf1 2689431 maf1 Rhodopseudomonas palustris CGA009 maf protein NP_945652.1 329837 D 258594 CDS NP_945653.1 39933377 2689609 330542..331141 1 NC_005296.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 331141 coaE 2689609 coaE Rhodopseudomonas palustris CGA009 dephospho-CoA kinase NP_945653.1 330542 D 258594 CDS NP_945654.1 39933378 2689605 331177..331875 1 NC_005296.1 DNA polymerase III subunit epsilon 331875 dnaQ 2689605 dnaQ Rhodopseudomonas palustris CGA009 DNA polymerase III subunit epsilon NP_945654.1 331177 D 258594 CDS NP_945655.1 39933379 2693105 complement(331954..332427) 1 NC_005296.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 332427 secB 2693105 secB Rhodopseudomonas palustris CGA009 preprotein translocase subunit SecB NP_945655.1 331954 R 258594 CDS NP_945656.1 39933380 2689810 332729..333598 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; import inner membrane translocase subunit Tim44 333598 2689810 RPA0303 Rhodopseudomonas palustris CGA009 import inner membrane translocase subunit Tim44 NP_945656.1 332729 D 258594 CDS NP_945657.1 39933381 2689100 333507..335069 1 NC_005296.1 membrane-bound lytic murein transglycosylase 335069 2689100 RPA0304 Rhodopseudomonas palustris CGA009 membrane-bound lytic murein transglycosylase NP_945657.1 333507 D 258594 CDS NP_945658.1 39933382 2688848 335075..335659 1 NC_005296.1 Smr protein/MutS2 335659 2688848 RPA0305 Rhodopseudomonas palustris CGA009 Smr protein/MutS2 NP_945658.1 335075 D 258594 CDS NP_945659.1 39933383 2689813 complement(335995..337296) 1 NC_005296.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 337296 hslU 2689813 hslU Rhodopseudomonas palustris CGA009 ATP-dependent protease ATP-binding subunit HslU NP_945659.1 335995 R 258594 CDS NP_945660.1 39933384 2689504 complement(337338..337949) 1 NC_005296.1 hypothetical protein 337949 2689504 RPA0307 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945660.1 337338 R 258594 CDS NP_945661.1 39933385 2689815 complement(337946..338515) 1 NC_005296.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 338515 hslV 2689815 hslV Rhodopseudomonas palustris CGA009 ATP-dependent protease peptidase subunit NP_945661.1 337946 R 258594 CDS NP_945662.1 39933386 2689501 338703..339296 1 NC_005296.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 339296 hisB 2689501 hisB Rhodopseudomonas palustris CGA009 imidazoleglycerol-phosphate dehydratase NP_945662.1 338703 D 258594 CDS NP_945663.1 39933387 2689802 339324..339845 1 NC_005296.1 hypothetical protein 339845 2689802 RPA0310 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945663.1 339324 D 258594 CDS NP_945664.1 39933388 2693112 339842..340492 1 NC_005296.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 340492 hisH 2693112 hisH Rhodopseudomonas palustris CGA009 imidazole glycerol phosphate synthase subunit HisH NP_945664.1 339842 D 258594 CDS NP_945665.1 39933389 2689809 340489..341226 1 NC_005296.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 341226 hisA 2689809 hisA Rhodopseudomonas palustris CGA009 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase NP_945665.1 340489 D 258594 CDS NP_945666.1 39933390 2693114 341237..342004 1 NC_005296.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 342004 hisF 2693114 hisF Rhodopseudomonas palustris CGA009 imidazole glycerol phosphate synthase subunit HisF NP_945666.1 341237 D 258594 CDS NP_945667.1 39933391 2693116 342058..342381 1 NC_005296.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 342381 hisE 2693116 hisE Rhodopseudomonas palustris CGA009 phosphoribosyl-ATP pyrophosphatase NP_945667.1 342058 D 258594 CDS NP_945668.1 39933392 2689507 342456..343412 1 NC_005296.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 343412 coaA 2689507 coaA Rhodopseudomonas palustris CGA009 pantothenate kinase NP_945668.1 342456 D 258594 CDS NP_945669.1 39933393 2689505 complement(343601..344551) 1 NC_005296.1 hypothetical protein 344551 2689505 RPA0316 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945669.1 343601 R 258594 CDS NP_945670.1 39933394 2689506 complement(344712..346622) 1 NC_005296.1 sensor histidine kinase 346622 2689506 RPA0317 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_945670.1 344712 R 258594 CDS NP_945671.1 39933395 2689511 complement(346749..348287) 1 NC_005296.1 Mg chelatase-like protein 348287 2689511 RPA0318 Rhodopseudomonas palustris CGA009 Mg chelatase-like protein NP_945671.1 346749 R 258594 CDS NP_945672.1 39933396 2689490 complement(348387..348611) 1 NC_005296.1 hypothetical protein 348611 2689490 RPA0319 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945672.1 348387 R 258594 CDS NP_945673.1 39933397 2691374 complement(348608..349264) 1 NC_005296.1 autoinducer (acylhomoserine lactone) synthase 349264 2691374 RPA0320 Rhodopseudomonas palustris CGA009 autoinducer (acylhomoserine lactone) synthase NP_945673.1 348608 R 258594 CDS NP_945674.1 39933398 2689487 complement(349350..350081) 1 NC_005296.1 LuxR family transcriptional regulator 350081 2689487 RPA0321 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_945674.1 349350 R 258594 CDS NP_945675.1 39933399 2689798 complement(350318..351259) 1 NC_005296.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 351259 gshB 2689798 gshB Rhodopseudomonas palustris CGA009 glutathione synthetase NP_945675.1 350318 R 258594 CDS NP_945676.1 39933400 2691671 complement(351332..351724) 1 NC_005296.1 hypothetical protein 351724 2691671 RPA0323 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945676.1 351332 R 258594 CDS NP_945677.1 39933401 2689512 complement(351711..352673) 1 NC_005296.1 hypothetical protein 352673 2689512 RPA0324 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945677.1 351711 R 258594 CDS NP_945678.1 39933402 2689325 352886..354085 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; extracellular ligand-binding receptor 354085 2689325 RPA0325 Rhodopseudomonas palustris CGA009 extracellular ligand-binding receptor NP_945678.1 352886 D 258594 CDS NP_945679.1 39933403 2689811 complement(354103..354465) 1 NC_005296.1 MarR family transcriptional regulator 354465 2689811 RPA0326 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_945679.1 354103 R 258594 CDS NP_945680.1 39933404 2689814 complement(354870..356027) 1 NC_005296.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 356027 hemN2 2689814 hemN2 Rhodopseudomonas palustris CGA009 coproporphyrinogen III oxidase NP_945680.1 354870 R 258594 CDS NP_945681.1 39933405 2689496 complement(356017..356649) 1 NC_005296.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 356649 2689496 RPA0328 Rhodopseudomonas palustris CGA009 deoxyribonucleotide triphosphate pyrophosphatase NP_945681.1 356017 R 258594 CDS NP_945682.1 39933406 2689824 complement(356701..357414) 1 NC_005296.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 357414 rph 2689824 rph Rhodopseudomonas palustris CGA009 ribonuclease PH NP_945682.1 356701 R 258594 CDS NP_945683.1 39933407 2693109 357569..358657 1 NC_005296.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 358657 hrcA 2693109 hrcA Rhodopseudomonas palustris CGA009 heat-inducible transcription repressor NP_945683.1 357569 D 258594 CDS NP_945684.1 39933408 2689494 358745..359371 1 NC_005296.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 359371 2689494 RPA0331 Rhodopseudomonas palustris CGA009 heat shock protein GrpE NP_945684.1 358745 D 258594 CDS NP_945685.1 39933409 2693118 complement(359478..360419) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 360419 2693118 RPA0332 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945685.1 359478 R 258594 CDS NP_945686.1 39933410 2689800 360754..362649 1 NC_005296.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 362649 dnaK 2689800 dnaK Rhodopseudomonas palustris CGA009 molecular chaperone DnaK NP_945686.1 360754 D 258594 CDS NP_945687.1 39933411 2691660 362864..364003 1 NC_005296.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 364003 dnaJ 2691660 dnaJ Rhodopseudomonas palustris CGA009 molecular chaperone DnaJ NP_945687.1 362864 D 258594 CDS NP_945688.1 39933412 2691667 364097..364702 1 NC_005296.1 phospholipid N-methyltransferase 364702 2691667 RPA0335 Rhodopseudomonas palustris CGA009 phospholipid N-methyltransferase NP_945688.1 364097 D 258594 CDS NP_945689.1 39933413 2689493 364804..365385 1 NC_005296.1 NADPH-dependent FMN reductase 365385 2689493 RPA0336 Rhodopseudomonas palustris CGA009 NADPH-dependent FMN reductase NP_945689.1 364804 D 258594 CDS NP_945690.1 39933414 2689700 365393..366106 1 NC_005296.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 366106 pyrF 2689700 pyrF Rhodopseudomonas palustris CGA009 orotidine 5'-phosphate decarboxylase NP_945690.1 365393 D 258594 CDS NP_945691.1 39933415 2689940 366132..366440 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 366440 2689940 RPA0338 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945691.1 366132 D 258594 CDS NP_945692.1 39933416 2689626 366537..367352 1 NC_005296.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 367352 dapB 2689626 dapB Rhodopseudomonas palustris CGA009 dihydrodipicolinate reductase NP_945692.1 366537 D 258594 CDS NP_945693.1 39933417 2688760 complement(367433..368947) 1 NC_005296.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 368947 pgm1 2688760 pgm1 Rhodopseudomonas palustris CGA009 phosphoglyceromutase NP_945693.1 367433 R 258594 CDS NP_945694.1 39933418 2689409 complement(369039..369971) 1 NC_005296.1 O6-methylguanine-DNA methyltransferase 369971 ogt 2689409 ogt Rhodopseudomonas palustris CGA009 O6-methylguanine-DNA methyltransferase NP_945694.1 369039 R 258594 CDS NP_945695.1 39933419 2689865 complement(369987..370502) 1 NC_005296.1 hypothetical protein 370502 2689865 RPA0342 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945695.1 369987 R 258594 CDS NP_945696.1 39933420 2693131 370525..371310 1 NC_005296.1 endonuclease III 371310 nth 2693131 nth Rhodopseudomonas palustris CGA009 endonuclease III NP_945696.1 370525 D 258594 CDS NP_945697.1 39933421 2689344 complement(371426..372997) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 372997 2689344 RPA0344 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945697.1 371426 R 258594 CDS NP_945698.1 39933422 2689340 complement(373120..374088) 1 NC_005296.1 protoporphyrin IX magnesium chelatase bchO 374088 2689340 RPA0345 Rhodopseudomonas palustris CGA009 protoporphyrin IX magnesium chelatase bchO NP_945698.1 373120 R 258594 CDS NP_945699.1 39933423 2689343 complement(374662..375405) 1 NC_005296.1 role in sulfur assimilation; CysZ-like protein 375405 2689343 RPA0346 Rhodopseudomonas palustris CGA009 CysZ-like protein NP_945699.1 374662 R 258594 CDS NP_945700.1 39933424 2689655 complement(375493..377325) 1 NC_005296.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 377325 aceK 2689655 aceK Rhodopseudomonas palustris CGA009 bifunctional isocitrate dehydrogenase kinase/phosphatase protein NP_945700.1 375493 R 258594 CDS NP_945701.1 39933425 2689317 complement(377649..378572) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydrolase 378572 2689317 RPA0348 Rhodopseudomonas palustris CGA009 hydrolase NP_945701.1 377649 R 258594 CDS NP_945702.1 39933426 2689315 378721..379893 1 NC_005296.1 site-specific DNA-methyltransferase 379893 dcm 2689315 dcm Rhodopseudomonas palustris CGA009 site-specific DNA-methyltransferase NP_945702.1 378721 D 258594 CDS NP_945703.1 39933427 2689647 379890..380306 1 NC_005296.1 patch repair protein 380306 vsr 2689647 vsr Rhodopseudomonas palustris CGA009 patch repair protein NP_945703.1 379890 D 258594 CDS NP_945704.1 39933428 2689645 380311..381132 1 NC_005296.1 hypothetical protein 381132 2689645 RPA0351 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945704.1 380311 D 258594 CDS NP_945705.1 39933429 2689311 complement(381139..382950) 1 NC_005296.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 382950 lepA 2689311 lepA Rhodopseudomonas palustris CGA009 GTP-binding protein LepA NP_945705.1 381139 R 258594 CDS NP_945706.1 39933430 2689310 383056..384633 1 NC_005296.1 hypothetical protein 384633 2689310 RPA0353 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945706.1 383056 D 258594 CDS NP_945707.1 39933431 2689307 complement(384654..384986) 1 NC_005296.1 PTS system phosphocarrier protein HPr nitrogen regulation 384986 2689307 RPA0354 Rhodopseudomonas palustris CGA009 PTS system phosphocarrier protein HPr nitrogen regulation NP_945707.1 384654 R 258594 CDS NP_945708.1 39933432 2691672 complement(384983..385384) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; PTS system fructose subfamily transporter subunit IIA 385384 2691672 RPA0355 Rhodopseudomonas palustris CGA009 PTS system fructose subfamily transporter subunit IIA NP_945708.1 384983 R 258594 CDS NP_945709.1 39933433 2689858 complement(385572..386039) 1 NC_005296.1 HPr kinase 386039 2689858 RPA0356 Rhodopseudomonas palustris CGA009 HPr kinase NP_945709.1 385572 R 258594 CDS NP_945710.1 39933434 2689281 complement(386036..387781) 1 NC_005296.1 sensor signal transduction histidine kinase 387781 exoS 2689281 exoS Rhodopseudomonas palustris CGA009 sensor signal transduction histidine kinase NP_945710.1 386036 R 258594 CDS NP_945711.1 39933435 2689272 complement(387944..388645) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; two-component transcriptional regulator ChvI 388645 chvI 2689272 chvI Rhodopseudomonas palustris CGA009 two-component transcriptional regulator ChvI NP_945711.1 387944 R 258594 CDS NP_945712.1 39933436 2688768 388879..389613 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 389613 2688768 RPA0359 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945712.1 388879 D 258594 CDS NP_945713.1 39933437 2689643 389802..391415 1 NC_005296.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 391415 pckA 2689643 pckA Rhodopseudomonas palustris CGA009 phosphoenolpyruvate carboxykinase NP_945713.1 389802 D 258594 CDS NP_945714.1 39933438 2689640 complement(391503..392378) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 392378 2689640 RPA0361 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945714.1 391503 R 258594 CDS NP_945715.1 39933439 2689274 392647..393522 1 NC_005296.1 class A beta-lactamase 393522 penP 2689274 penP Rhodopseudomonas palustris CGA009 class A beta-lactamase NP_945715.1 392647 D 258594 CDS NP_945716.1 39933440 2691363 complement(393537..394664) 1 NC_005296.1 hypothetical protein 394664 2691363 RPA0363 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945716.1 393537 R 258594 CDS NP_945717.1 39933441 2689638 complement(394743..395546) 1 NC_005296.1 permease 395546 2689638 RPA0364 Rhodopseudomonas palustris CGA009 permease NP_945717.1 394743 R 258594 CDS NP_945718.1 39933442 2691373 395640..396536 1 NC_005296.1 beta-lactamase-like protein 396536 2691373 RPA0365 Rhodopseudomonas palustris CGA009 beta-lactamase-like protein NP_945718.1 395640 D 258594 CDS NP_945719.1 39933443 2689255 396635..396997 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 396997 2689255 RPA0366 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945719.1 396635 D 258594 CDS NP_945720.1 39933444 2689104 complement(397207..398106) 1 NC_005296.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 398106 rpoH 2689104 rpoH Rhodopseudomonas palustris CGA009 RNA polymerase factor sigma-32 NP_945720.1 397207 R 258594 CDS NP_945721.1 39933445 2689669 complement(398328..399551) 1 NC_005296.1 pseudouridine synthase 399551 rluD 2689669 rluD Rhodopseudomonas palustris CGA009 pseudouridine synthase NP_945721.1 398328 R 258594 CDS NP_945722.1 39933446 2689212 complement(400116..402719) 1 NC_005296.1 aminoacyl-tRNA synthetase 402719 2689212 RPA0369 Rhodopseudomonas palustris CGA009 aminoacyl-tRNA synthetase NP_945722.1 400116 R 258594 CDS NP_945723.1 39933447 2689215 complement(403032..405548) 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 405548 2689215 RPA0370 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_945723.1 403032 R 258594 CDS NP_945724.1 39933448 2689523 complement(405749..406933) 1 NC_005296.1 cystathionine gamma-lyase 406933 metB 2689523 metB Rhodopseudomonas palustris CGA009 cystathionine gamma-lyase NP_945724.1 405749 R 258594 CDS NP_945725.1 39933449 2689520 407065..407526 1 NC_005296.1 CTG start codon; AsnC family transcriptional regulator 407526 2689520 RPA0372 Rhodopseudomonas palustris CGA009 AsnC family transcriptional regulator NP_945725.1 407065 D 258594 CDS NP_945726.1 39933450 2689521 complement(407527..407964) 1 NC_005296.1 thioredoxin 407964 trxC 2689521 trxC Rhodopseudomonas palustris CGA009 thioredoxin NP_945726.1 407527 R 258594 CDS NP_945727.1 39933451 2689484 complement(408104..409087) 1 NC_005296.1 Zn-containing alcohol dehydrogenase 409087 2689484 RPA0374 Rhodopseudomonas palustris CGA009 Zn-containing alcohol dehydrogenase NP_945727.1 408104 R 258594 CDS NP_945728.1 39933452 2689202 complement(409161..409382) 1 NC_005296.1 cation transport regulator 409382 chaB 2689202 chaB Rhodopseudomonas palustris CGA009 cation transport regulator NP_945728.1 409161 R 258594 CDS NP_945729.1 39933453 2689672 409612..410334 1 NC_005296.1 L-isoaspartyl protein carboxyl methyltransferase 410334 pimt1 2689672 pimt1 Rhodopseudomonas palustris CGA009 L-isoaspartyl protein carboxyl methyltransferase NP_945729.1 409612 D 258594 CDS NP_945730.1 39933454 2689665 410486..411310 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 411310 2689665 RPA0377 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945730.1 410486 D 258594 CDS NP_945731.1 39933455 2689189 complement(411507..412787) 1 NC_005296.1 alpha-D-galactoside galactohydrolase 412787 melA 2689189 melA Rhodopseudomonas palustris CGA009 alpha-D-galactoside galactohydrolase NP_945731.1 411507 R 258594 CDS NP_945732.1 39933456 2689184 413011..413949 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 6-phosphofructokinase 413949 pfkB 2689184 pfkB Rhodopseudomonas palustris CGA009 6-phosphofructokinase NP_945732.1 413011 D 258594 CDS NP_945733.1 39933457 2689180 414065..416377 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; oxidoreductase 416377 2689180 RPA0380 Rhodopseudomonas palustris CGA009 oxidoreductase NP_945733.1 414065 D 258594 CDS NP_945734.1 39933458 2689693 416649..417911 1 NC_005296.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 417911 glgC 2689693 glgC Rhodopseudomonas palustris CGA009 glucose-1-phosphate adenylyltransferase NP_945734.1 416649 D 258594 CDS NP_945735.1 39933459 2689178 417908..419359 1 NC_005296.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 419359 glgA1 2689178 glgA1 Rhodopseudomonas palustris CGA009 glycogen synthase NP_945735.1 417908 D 258594 CDS NP_945736.1 39933460 2689688 419505..420305 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 420305 2689688 RPA0383 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_945736.1 419505 D 258594 CDS NP_945737.1 39933461 2689686 420302..420874 1 NC_005296.1 hypothetical protein 420874 2689686 RPA0384 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945737.1 420302 D 258594 CDS NP_945738.1 39933462 2689172 complement(420890..421615) 1 NC_005296.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 421615 radC 2689172 radC Rhodopseudomonas palustris CGA009 DNA repair protein RadC NP_945738.1 420890 R 258594 CDS NP_945739.1 39933463 2689472 421950..423050 1 NC_005296.1 Ku domain-containing protein 423050 2689472 RPA0386 Rhodopseudomonas palustris CGA009 Ku domain-containing protein NP_945739.1 421950 D 258594 CDS NP_945740.1 39933464 2689469 complement(423309..424133) 1 NC_005296.1 methionine aminopeptidase type I 424133 map 2689469 map Rhodopseudomonas palustris CGA009 methionine aminopeptidase type I NP_945740.1 423309 R 258594 CDS NP_945741.1 39933465 2689624 424329..426122 1 NC_005296.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 426122 2689624 RPA0388 Rhodopseudomonas palustris CGA009 potassium/proton antiporter NP_945741.1 424329 D 258594 CDS NP_945742.1 39933466 2692869 complement(426147..427109) 1 NC_005296.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 427109 mepA 2692869 mepA Rhodopseudomonas palustris CGA009 penicillin-insensitive murein endopeptidase NP_945742.1 426147 R 258594 CDS NP_945743.1 39933467 2689454 427489..429726 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 429726 2689454 RPA0390 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_945743.1 427489 D 258594 CDS NP_945744.1 39933468 2689879 complement(429741..431498) 1 NC_005296.1 alkaline phosphatase 431498 2689879 RPA0391 Rhodopseudomonas palustris CGA009 alkaline phosphatase NP_945744.1 429741 R 258594 CDS NP_945745.1 39933469 2689453 complement(431740..433077) 1 NC_005296.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 433077 argG 2689453 argG Rhodopseudomonas palustris CGA009 argininosuccinate synthase NP_945745.1 431740 R 258594 CDS NP_945746.1 39933470 2689429 complement(433170..433949) 1 NC_005296.1 PA-phosphatase-like phosphoesterase 433949 2689429 RPA0393 Rhodopseudomonas palustris CGA009 PA-phosphatase-like phosphoesterase NP_945746.1 433170 R 258594 CDS NP_945747.1 39933471 2689427 complement(433946..434446) 1 NC_005296.1 hypothetical protein 434446 2689427 RPA0394 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945747.1 433946 R 258594 CDS NP_945748.1 39933472 2689617 complement(434446..435039) 1 NC_005296.1 metal dependent phosphohydrolase 435039 2689617 RPA0395 Rhodopseudomonas palustris CGA009 metal dependent phosphohydrolase NP_945748.1 434446 R 258594 CDS NP_945749.1 39933473 2689607 complement(435044..436318) 1 NC_005296.1 hypothetical protein 436318 2689607 RPA0396 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945749.1 435044 R 258594 CDS NP_945750.1 39933474 2689600 complement(436430..437005) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 437005 2689600 RPA0397 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945750.1 436430 R 258594 CDS NP_945751.1 39933475 2689598 complement(437159..437995) 1 NC_005296.1 2 4-dienoyl-CoA reductase 437995 2689598 RPA0398 Rhodopseudomonas palustris CGA009 2 4-dienoyl-CoA reductase NP_945751.1 437159 R 258594 CDS NP_945752.1 39933476 2689595 complement(438123..439292) 1 NC_005296.1 transposase 439292 2689595 RPA0399 Rhodopseudomonas palustris CGA009 transposase NP_945752.1 438123 R 258594 CDS NP_945753.1 39933477 2689333 439493..440467 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alcohol dehydrogenase 440467 2689333 RPA0400 Rhodopseudomonas palustris CGA009 alcohol dehydrogenase NP_945753.1 439493 D 258594 CDS NP_945754.1 39933478 2689330 complement(440595..442730) 1 NC_005296.1 amine oxidase 442730 2689330 RPA0401 Rhodopseudomonas palustris CGA009 amine oxidase NP_945754.1 440595 R 258594 CDS NP_945755.1 39933479 2689591 442869..443489 1 NC_005296.1 TetR family transcriptional regulator 443489 2689591 RPA0402 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_945755.1 442869 D 258594 CDS NP_945756.1 39933480 2689401 complement(443508..443882) 1 NC_005296.1 hypothetical protein 443882 2689401 RPA0403 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945756.1 443508 R 258594 CDS NP_945757.1 39933481 2689873 complement(443965..444267) 1 NC_005296.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 444267 phhB 2689873 phhB Rhodopseudomonas palustris CGA009 pterin-4-alpha-carbinolamine dehydratase NP_945757.1 443965 R 258594 CDS NP_945758.1 39933482 2689422 444410..445855 1 NC_005296.1 hypothetical protein 445855 2689422 RPA0405 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945758.1 444410 D 258594 CDS NP_945759.1 39933483 2689680 complement(445859..447304) 1 NC_005296.1 hypothetical protein 447304 2689680 RPA0406 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945759.1 445859 R 258594 CDS NP_945760.1 39933484 2689803 complement(447309..449585) 1 NC_005296.1 outer membrane siderophore receptor 449585 2689803 RPA0407 Rhodopseudomonas palustris CGA009 outer membrane siderophore receptor NP_945760.1 447309 R 258594 CDS NP_945761.1 39933485 2689805 450314..452137 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; GTP-binding protein TypA 452137 bipA 2689805 bipA Rhodopseudomonas palustris CGA009 GTP-binding protein TypA NP_945761.1 450314 D 258594 CDS NP_945762.1 39933486 2689812 452247..453515 1 NC_005296.1 amine oxidase 453515 2689812 RPA0409 Rhodopseudomonas palustris CGA009 amine oxidase NP_945762.1 452247 D 258594 CDS NP_945763.1 39933487 2689677 453691..454200 1 NC_005296.1 N-acetyltransferase GCN5 454200 2689677 RPA0410 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_945763.1 453691 D 258594 CDS NP_945764.1 39933488 2689589 454277..454813 1 NC_005296.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 454813 ppa 2689589 ppa Rhodopseudomonas palustris CGA009 inorganic pyrophosphatase NP_945764.1 454277 D 258594 CDS NP_945765.1 39933489 2689575 454849..456330 1 NC_005296.1 hypothetical protein 456330 CPS1 2689575 CPS1 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945765.1 454849 D 258594 CDS NP_945766.1 39933490 2689707 complement(456520..457407) 1 NC_005296.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 457407 2689707 RPA0413 Rhodopseudomonas palustris CGA009 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase NP_945766.1 456520 R 258594 CDS NP_945767.1 39933491 2689424 complement(457514..457852) 1 NC_005296.1 hypothetical protein 457852 2689424 RPA0414 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945767.1 457514 R 258594 CDS NP_945768.1 39933492 2693123 complement(457866..458363) 1 NC_005296.1 hypothetical protein 458363 2693123 RPA0415 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945768.1 457866 R 258594 CDS NP_945769.1 39933493 2689485 complement(458632..459444) 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 459444 2689485 RPA0416 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_945769.1 458632 R 258594 CDS NP_945770.1 39933494 2693098 complement(459526..460026) 1 NC_005296.1 hypothetical protein 460026 2693098 RPA0417 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945770.1 459526 R 258594 CDS NP_945771.1 39933495 2689509 complement(460130..460927) 1 NC_005296.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 460927 2689509 RPA0418 Rhodopseudomonas palustris CGA009 glutamine amidotransferase NP_945771.1 460130 R 258594 CDS NP_945772.1 39933496 2693099 complement(461048..461827) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short chain dehydrogenase/reductase family protein 461827 2693099 RPA0419 Rhodopseudomonas palustris CGA009 short chain dehydrogenase/reductase family protein NP_945772.1 461048 R 258594 CDS NP_945773.1 39933497 2689516 complement(462010..462630) 1 NC_005296.1 hypothetical protein 462630 2689516 RPA0420 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945773.1 462010 R 258594 CDS NP_945774.1 39933498 2688779 complement(462674..464059) 1 NC_005296.1 cytochrome P450 464059 2688779 RPA0421 Rhodopseudomonas palustris CGA009 cytochrome P450 NP_945774.1 462674 R 258594 CDS NP_945775.1 39933499 2689399 complement(464180..465181) 1 NC_005296.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 465181 2689399 RPA0422 Rhodopseudomonas palustris CGA009 2-hydroxyacid dehydrogenase NP_945775.1 464180 R 258594 CDS NP_945776.1 39933500 2689515 465416..465940 1 NC_005296.1 hypothetical protein 465940 2689515 RPA0423 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945776.1 465416 D 258594 CDS NP_945777.1 39933501 2689196 complement(466048..466539) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FUR family transcriptional regulator 466539 2689196 RPA0424 Rhodopseudomonas palustris CGA009 FUR family transcriptional regulator NP_945777.1 466048 R 258594 CDS NP_945778.1 39933502 2689675 466798..467325 1 NC_005296.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 467325 fabA 2689675 fabA Rhodopseudomonas palustris CGA009 3-hydroxydecanoyl-ACP dehydratase NP_945778.1 466798 D 258594 CDS NP_945779.1 39933503 2689211 467387..468613 1 NC_005296.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 468613 fabB 2689211 fabB Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP synthase NP_945779.1 467387 D 258594 CDS NP_945780.1 39933504 2689855 468789..469598 1 NC_005296.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 469598 2689855 RPA0427 Rhodopseudomonas palustris CGA009 enoyl-ACP reductase NP_945780.1 468789 D 258594 CDS NP_945781.1 39933505 2689191 complement(469771..470289) 1 NC_005296.1 hypothetical protein 470289 2689191 RPA0428 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945781.1 469771 R 258594 CDS NP_945782.1 39933506 2689186 complement(470517..472727) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; catalase/peroxidase HPI 472727 katG 2689186 katG Rhodopseudomonas palustris CGA009 catalase/peroxidase HPI NP_945782.1 470517 R 258594 CDS NP_945783.1 39933507 2689413 472997..473935 1 NC_005296.1 LysR family transcriptional regulator 473935 oxyR 2689413 oxyR Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_945783.1 472997 D 258594 CDS NP_945784.1 39933508 2689415 complement(473947..475629) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 475629 2689415 RPA0431 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_945784.1 473947 R 258594 CDS NP_945785.1 39933509 2689403 complement(475919..478087) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; polynucleotide phosphorylase 478087 pnp 2689403 pnp Rhodopseudomonas palustris CGA009 polynucleotide phosphorylase NP_945785.1 475919 R 258594 CDS NP_945786.1 39933510 2689477 complement(478426..478695) 1 NC_005296.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 478695 rpsO 2689477 rpsO Rhodopseudomonas palustris CGA009 30S ribosomal protein S15 NP_945786.1 478426 R 258594 CDS NP_945787.1 39933511 2689402 complement(478698..479798) 1 NC_005296.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 479798 truB 2689402 truB Rhodopseudomonas palustris CGA009 tRNA pseudouridine synthase B NP_945787.1 478698 R 258594 CDS NP_945788.1 39933512 2691677 complement(479798..480211) 1 NC_005296.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 480211 rbfA 2691677 rbfA Rhodopseudomonas palustris CGA009 ribosome-binding factor A NP_945788.1 479798 R 258594 CDS NP_945789.1 39933513 2689173 complement(480385..483036) 1 NC_005296.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 483036 infB 2689173 infB Rhodopseudomonas palustris CGA009 translation initiation factor IF-2 NP_945789.1 480385 R 258594 CDS NP_945790.1 39933514 2689671 complement(483029..483808) 1 NC_005296.1 hypothetical protein 483808 2689671 RPA0437 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945790.1 483029 R 258594 CDS NP_945791.1 39933515 2689461 complement(483870..485483) 1 NC_005296.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 485483 nusA 2689461 nusA Rhodopseudomonas palustris CGA009 transcription elongation factor NusA NP_945791.1 483870 R 258594 CDS NP_945792.1 39933516 2689670 complement(485486..486265) 1 NC_005296.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 486265 2689670 RPA0439 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945792.1 485486 R 258594 CDS NP_945793.1 39933517 2689463 486599..487684 1 NC_005296.1 hypothetical protein 487684 2689463 RPA0440 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945793.1 486599 D 258594 CDS NP_945794.1 39933518 2693120 487808..488656 1 NC_005296.1 hypothetical protein 488656 2693120 RPA0441 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945794.1 487808 D 258594 CDS NP_945795.1 39933519 2689452 complement(488669..489466) 1 NC_005296.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 489466 trmB 2689452 trmB Rhodopseudomonas palustris CGA009 tRNA (guanine-N(7)-)-methyltransferase NP_945795.1 488669 R 258594 CDS NP_945796.1 39933520 2693150 complement(489541..489960) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; XRE family transcriptional regulator 489960 2693150 RPA0443 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_945796.1 489541 R 258594 CDS NP_945797.1 39933521 2693132 complement(490161..491771) 1 NC_005296.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 491771 lnt 2693132 lnt Rhodopseudomonas palustris CGA009 apolipoprotein N-acyltransferase NP_945797.1 490161 R 258594 CDS NP_945798.1 39933522 2693135 complement(491768..492913) 1 NC_005296.1 HlyC/CorC family transporter 492913 2693135 RPA0445 Rhodopseudomonas palustris CGA009 HlyC/CorC family transporter NP_945798.1 491768 R 258594 CDS NP_945799.1 39933523 2689451 complement(492915..493487) 1 NC_005296.1 hypothetical protein 493487 2689451 RPA0446 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945799.1 492915 R 258594 CDS NP_945800.1 39933524 2689474 complement(493487..494368) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phoH-like protein 494368 2689474 RPA0447 Rhodopseudomonas palustris CGA009 phoH-like protein NP_945800.1 493487 R 258594 CDS NP_945801.1 39933525 2689447 complement(494549..495940) 1 NC_005296.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 495940 miaB 2689447 miaB Rhodopseudomonas palustris CGA009 (dimethylallyl)adenosine tRNA methylthiotransferase NP_945801.1 494549 R 258594 CDS NP_945802.1 39933526 2689204 complement(496060..496719) 1 NC_005296.1 HAD-superfamily hydrolase 496719 2689204 RPA0449 Rhodopseudomonas palustris CGA009 HAD-superfamily hydrolase NP_945802.1 496060 R 258594 CDS NP_945803.1 39933527 2689441 complement(496807..497238) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FUR family transcriptional regulator 497238 2689441 RPA0450 Rhodopseudomonas palustris CGA009 FUR family transcriptional regulator NP_945803.1 496807 R 258594 CDS NP_945804.1 39933528 2689437 complement(497301..497786) 1 NC_005296.1 ribosomal-protein-alanine acetyltransferase 497786 rimI 2689437 rimI Rhodopseudomonas palustris CGA009 ribosomal-protein-alanine acetyltransferase NP_945804.1 497301 R 258594 CDS NP_945805.1 39933529 2689438 complement(497809..498504) 1 NC_005296.1 peptidase M22 glycoprotease 498504 2689438 RPA0452 Rhodopseudomonas palustris CGA009 peptidase M22 glycoprotease NP_945805.1 497809 R 258594 CDS NP_945806.1 39933530 2689808 complement(498641..499207) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NifU-like domain-containing protein 499207 2689808 RPA0453 Rhodopseudomonas palustris CGA009 NifU-like domain-containing protein NP_945806.1 498641 R 258594 CDS NP_945807.1 39933531 2689480 complement(499353..499901) 1 NC_005296.1 hypothetical protein 499901 2689480 RPA0454 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945807.1 499353 R 258594 CDS NP_945808.1 39933532 2689097 complement(500093..501145) 1 NC_005296.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 501145 trpS 2689097 trpS Rhodopseudomonas palustris CGA009 tryptophanyl-tRNA synthetase NP_945808.1 500093 R 258594 CDS NP_945809.1 39933533 2688849 complement(501201..502757) 1 NC_005296.1 MviN family virulence factors efflux protein 502757 2688849 RPA0456 Rhodopseudomonas palustris CGA009 MviN family virulence factors efflux protein NP_945809.1 501201 R 258594 CDS NP_945810.1 39933534 2689664 503032..504099 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; PfkB protein 504099 2689664 RPA0457 Rhodopseudomonas palustris CGA009 PfkB protein NP_945810.1 503032 D 258594 CDS NP_945811.1 39933535 2689348 complement(504322..505875) 1 NC_005296.1 activates fatty acids by binding to coenzyme A; AMP-binding protein 505875 2689348 RPA0458 Rhodopseudomonas palustris CGA009 AMP-binding protein NP_945811.1 504322 R 258594 CDS NP_945812.1 39933536 2689435 complement(505524..506015) 1 NC_005296.1 fatty acid--CoA ligase 506015 2689435 RPA0459 Rhodopseudomonas palustris CGA009 fatty acid--CoA ligase NP_945812.1 505524 R 258594 CDS NP_945813.1 39933537 2689345 complement(506145..507332) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-lactamase 507332 2689345 RPA0460 Rhodopseudomonas palustris CGA009 beta-lactamase NP_945813.1 506145 R 258594 CDS NP_945814.1 39933538 2689337 508060..509553 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; succinate-semialdehyde dehydrogenase 509553 gabD1 2689337 gabD1 Rhodopseudomonas palustris CGA009 succinate-semialdehyde dehydrogenase NP_945814.1 508060 D 258594 CDS NP_945815.1 39933539 2689433 complement(509765..510670) 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 510670 2689433 RPA0462 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_945815.1 509765 R 258594 CDS NP_945816.1 39933540 2689430 510757..511386 1 NC_005296.1 TetR family transcriptional regulator 511386 2689430 RPA0463 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_945816.1 510757 D 258594 CDS NP_945817.1 39933541 2689616 511411..513036 1 NC_005296.1 long-chain fatty acid CoA ligase (AMP-binding) 513036 2689616 RPA0464 Rhodopseudomonas palustris CGA009 long-chain fatty acid CoA ligase (AMP-binding) NP_945817.1 511411 D 258594 CDS NP_945818.1 39933542 2689654 complement(513127..514560) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; transmembrane protein 514560 2689654 RPA0465 Rhodopseudomonas palustris CGA009 transmembrane protein NP_945818.1 513127 R 258594 CDS NP_945819.1 39933543 2689612 complement(514700..515383) 1 NC_005296.1 hypothetical protein 515383 2689612 RPA0466 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945819.1 514700 R 258594 CDS NP_945820.1 39933544 2689701 complement(515386..516372) 1 NC_005296.1 Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 516372 2689701 RPA0467 Rhodopseudomonas palustris CGA009 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase NP_945820.1 515386 R 258594 CDS NP_945821.1 39933545 2689695 complement(516372..517196) 1 NC_005296.1 binding-protein-dependent transport system inner membrane protein 517196 2689695 RPA0468 Rhodopseudomonas palustris CGA009 binding-protein-dependent transport system inner membrane protein NP_945821.1 516372 R 258594 CDS NP_945822.1 39933546 2689641 complement(517193..518023) 1 NC_005296.1 sulfate ester transporter ATP-binding protein 518023 AtsC 2689641 AtsC Rhodopseudomonas palustris CGA009 sulfate ester transporter ATP-binding protein NP_945822.1 517193 R 258594 CDS NP_945823.1 39933547 2689691 complement(518032..519174) 1 NC_005296.1 ABC transporter periplasmic binding protein 519174 2689691 RPA0470 Rhodopseudomonas palustris CGA009 ABC transporter periplasmic binding protein NP_945823.1 518032 R 258594 CDS NP_945824.1 39933548 2689397 519304..520116 1 NC_005296.1 creatininase 520116 2689397 RPA0471 Rhodopseudomonas palustris CGA009 creatininase NP_945824.1 519304 D 258594 CDS NP_945825.1 39933549 2689593 520350..522560 1 NC_005296.1 OmpA-like transmembrane domain-containing protein 522560 2689593 RPA0472 Rhodopseudomonas palustris CGA009 OmpA-like transmembrane domain-containing protein NP_945825.1 520350 D 258594 CDS NP_945826.1 39933550 2689590 complement(522591..524222) 1 NC_005296.1 ferredoxin-dependent glutamate synthase 524222 PA3602 2689590 PA3602 Rhodopseudomonas palustris CGA009 ferredoxin-dependent glutamate synthase NP_945826.1 522591 R 258594 CDS NP_945827.1 39933551 2689586 524516..525466 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 525466 2689586 RPA0474 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945827.1 524516 D 258594 CDS NP_945828.1 39933552 2693115 525558..526559 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; oxidoreductase 526559 2693115 RPA0475 Rhodopseudomonas palustris CGA009 oxidoreductase NP_945828.1 525558 D 258594 CDS NP_945829.1 39933553 2693129 526913..528244 1 NC_005296.1 hypothetical protein 528244 2693129 RPA0476 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945829.1 526913 D 258594 CDS NP_945830.1 39933554 2693125 528378..528938 1 NC_005296.1 hypothetical protein 528938 2693125 RPA0477 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945830.1 528378 D 258594 CDS NP_945831.1 39933555 2689296 528996..529292 1 NC_005296.1 hypothetical protein 529292 2689296 RPA0478 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945831.1 528996 D 258594 CDS NP_945832.1 39933556 2689291 complement(529346..530128) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 530128 fabG1 2689291 fabG1 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_945832.1 529346 R 258594 CDS NP_945833.1 39933557 2689635 530389..531453 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 531453 2689635 RPA0480 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_945833.1 530389 D 258594 CDS NP_945834.1 39933558 2689630 531480..532640 1 NC_005296.1 acyl-CoA dehydrogenase 532640 2689630 RPA0481 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_945834.1 531480 D 258594 CDS NP_945835.1 39933559 2693124 532674..533480 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; enoyl-CoA hydratase 533480 2693124 RPA0482 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_945835.1 532674 D 258594 CDS NP_945836.1 39933560 2689335 complement(533625..534389) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 534389 2689335 RPA0483 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945836.1 533625 R 258594 CDS NP_945837.1 39933561 2689423 complement(534392..535180) 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 535180 paaG1 2689423 paaG1 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_945837.1 534392 R 258594 CDS NP_945838.1 39933562 2689329 complement(535357..536562) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; urea/short-chain amide ABC transporter 536562 2689329 RPA0485 Rhodopseudomonas palustris CGA009 urea/short-chain amide ABC transporter NP_945838.1 535357 R 258594 CDS NP_945839.1 39933563 2691656 536979..537704 1 NC_005296.1 nuclease 537704 2691656 RPA0486 Rhodopseudomonas palustris CGA009 nuclease NP_945839.1 536979 D 258594 CDS NP_945840.1 39933564 2691652 537716..539233 1 NC_005296.1 peptidase M48 Ste24p 539233 2691652 RPA0487 Rhodopseudomonas palustris CGA009 peptidase M48 Ste24p NP_945840.1 537716 D 258594 CDS NP_945841.1 39933565 2689328 complement(539338..540000) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; CarD-like transcriptional regulator 540000 2689328 RPA0488 Rhodopseudomonas palustris CGA009 CarD-like transcriptional regulator NP_945841.1 539338 R 258594 CDS NP_945842.1 39933566 2689528 complement(540697..541035) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ferredoxin II 541035 2689528 RPA0489 Rhodopseudomonas palustris CGA009 ferredoxin II NP_945842.1 540697 R 258594 CDS NP_945843.1 39933567 2691645 complement(541110..541337) 1 NC_005296.1 hypothetical protein 541337 2691645 RPA0490 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945843.1 541110 R 258594 CDS NP_945844.1 39933568 2688782 complement(541410..544691) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; MgpS ATP-dependent helicase 544691 2688782 RPA0491 Rhodopseudomonas palustris CGA009 MgpS ATP-dependent helicase NP_945844.1 541410 R 258594 CDS NP_945845.1 39933569 2691643 complement(544994..546031) 1 NC_005296.1 hypothetical protein 546031 2691643 RPA0492 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945845.1 544994 R 258594 CDS NP_945846.1 39933570 2688769 546167..546472 1 NC_005296.1 required for 70S ribosome assembly; 50S ribosomal protein L28 546472 rpmB 2688769 rpmB Rhodopseudomonas palustris CGA009 50S ribosomal protein L28 NP_945846.1 546167 D 258594 CDS NP_945847.1 39933571 2689821 546761..550042 1 NC_005296.1 sensor histidine kinase 550042 2689821 RPA0494 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_945847.1 546761 D 258594 CDS NP_945848.1 39933572 2688770 complement(550066..551214) 1 NC_005296.1 hypothetical protein 551214 2688770 RPA0495 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945848.1 550066 R 258594 CDS NP_945849.1 39933573 2688764 complement(551239..553143) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cobalt chelatase pCobT subunit 553143 cobT2 2688764 cobT2 Rhodopseudomonas palustris CGA009 cobalt chelatase pCobT subunit NP_945849.1 551239 R 258594 CDS NP_945850.1 39933574 2689319 complement(553140..553550) 1 NC_005296.1 N-acetyltransferase GCN5 553550 2689319 RPA0497 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_945850.1 553140 R 258594 CDS NP_945851.1 39933575 2688765 complement(553555..554550) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cobalt chelatase pCobS small subunit 554550 cobS2 2688765 cobS2 Rhodopseudomonas palustris CGA009 cobalt chelatase pCobS small subunit NP_945851.1 553555 R 258594 CDS NP_945852.1 39933576 2688761 554830..555447 1 NC_005296.1 DedA family protein 555447 2688761 RPA0499 Rhodopseudomonas palustris CGA009 DedA family protein NP_945852.1 554830 D 258594 CDS NP_945853.1 39933577 2688758 complement(555512..556156) 1 NC_005296.1 molecular chaperone DnaJ 556156 2688758 RPA0500 Rhodopseudomonas palustris CGA009 molecular chaperone DnaJ NP_945853.1 555512 R 258594 CDS NP_945854.1 39933578 2689312 556277..556546 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; BolA-like protein 556546 2689312 RPA0501 Rhodopseudomonas palustris CGA009 BolA-like protein NP_945854.1 556277 D 258594 CDS NP_945855.1 39933579 2689304 complement(556564..557925) 1 NC_005296.1 HlyC/CorC family transporter 557925 2689304 RPA0502 Rhodopseudomonas palustris CGA009 HlyC/CorC family transporter NP_945855.1 556564 R 258594 CDS NP_945856.1 39933580 2689305 complement(557973..559118) 1 NC_005296.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 559118 aroB 2689305 aroB Rhodopseudomonas palustris CGA009 3-dehydroquinate synthase NP_945856.1 557973 R 258594 CDS NP_945857.1 39933581 2689302 complement(559129..559740) 1 NC_005296.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 559740 aroK 2689302 aroK Rhodopseudomonas palustris CGA009 shikimate kinase NP_945857.1 559129 R 258594 CDS NP_945858.1 39933582 2689285 559870..560016 1 NC_005296.1 hypothetical protein 560016 2689285 RPA0505 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945858.1 559870 D 258594 CDS NP_945859.1 39933583 2689280 560033..561049 1 NC_005296.1 tyrosine recombinase XerD 561049 2689280 RPA0506 Rhodopseudomonas palustris CGA009 tyrosine recombinase XerD NP_945859.1 560033 D 258594 CDS NP_945860.1 39933584 2689278 complement(561056..561631) 1 NC_005296.1 cytochrome b561 561631 2689278 RPA0507 Rhodopseudomonas palustris CGA009 cytochrome b561 NP_945860.1 561056 R 258594 CDS NP_945861.1 39933585 2689260 561895..562857 1 NC_005296.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 562857 accA 2689260 accA Rhodopseudomonas palustris CGA009 acetyl-CoA carboxylase carboxyltransferase subunit alpha NP_945861.1 561895 D 258594 CDS NP_945862.1 39933586 2689258 563190..564665 1 NC_005296.1 hypothetical protein 564665 2689258 RPA0509 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945862.1 563190 D 258594 CDS NP_945863.1 39933587 2689245 complement(564875..567715) 1 NC_005296.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 567715 secA 2689245 secA Rhodopseudomonas palustris CGA009 preprotein translocase subunit SecA NP_945863.1 564875 R 258594 CDS NP_945864.1 39933588 2689249 568058..568993 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; PpiC-type peptidyl-prolyl cis-trans isomerase 568993 2689249 RPA0511 Rhodopseudomonas palustris CGA009 PpiC-type peptidyl-prolyl cis-trans isomerase NP_945864.1 568058 D 258594 CDS NP_945865.1 39933589 2689242 complement(569086..571809) 1 NC_005296.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 571809 mutS 2689242 mutS Rhodopseudomonas palustris CGA009 DNA mismatch repair protein MutS NP_945865.1 569086 R 258594 CDS NP_945866.1 39933590 2689230 571985..573193 1 NC_005296.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 573193 pcaF 2689230 pcaF Rhodopseudomonas palustris CGA009 beta-ketoadipyl CoA thiolase NP_945866.1 571985 D 258594 CDS NP_945867.1 39933591 2689241 complement(573372..574934) 1 NC_005296.1 efflux pump protein FarB 574934 FarB 2689241 FarB Rhodopseudomonas palustris CGA009 efflux pump protein FarB NP_945867.1 573372 R 258594 CDS NP_945868.1 39933592 2689219 complement(574938..576107) 1 NC_005296.1 efflux pump protein FarA 576107 2689219 RPA0515 Rhodopseudomonas palustris CGA009 efflux pump protein FarA NP_945868.1 574938 R 258594 CDS NP_945869.1 39933593 2693097 complement(576100..576585) 1 NC_005296.1 MarR family transcriptional regulator 576585 2693097 RPA0516 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_945869.1 576100 R 258594 CDS NP_945870.1 39933594 2693121 576775..577272 1 NC_005296.1 FUR family transcriptional regulator 577272 2693121 RPA0517 Rhodopseudomonas palustris CGA009 FUR family transcriptional regulator NP_945870.1 576775 D 258594 CDS NP_945871.1 39933595 2693108 577437..578360 1 NC_005296.1 DMT family permease 578360 2693108 RPA0518 Rhodopseudomonas palustris CGA009 DMT family permease NP_945871.1 577437 D 258594 CDS NP_945872.1 39933596 2689868 578344..579669 1 NC_005296.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 579669 ispG 2689868 ispG Rhodopseudomonas palustris CGA009 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase NP_945872.1 578344 D 258594 CDS NP_945873.1 39933597 2689806 complement(579912..581564) 1 NC_005296.1 Na+/H+ antiporter 581564 nha 2689806 nha Rhodopseudomonas palustris CGA009 Na+/H+ antiporter NP_945873.1 579912 R 258594 CDS NP_945874.1 39933598 2688771 581747..583456 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 583456 2688771 RPA0521 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_945874.1 581747 D 258594 CDS NP_945875.1 39933599 2688767 583474..583917 1 NC_005296.1 photopigment and puc activator 583917 2688767 RPA0522 Rhodopseudomonas palustris CGA009 photopigment and puc activator NP_945875.1 583474 D 258594 CDS NP_945876.1 39933600 2689271 complement(583928..584614) 1 NC_005296.1 hypothetical protein 584614 2689271 RPA0523 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945876.1 583928 R 258594 CDS NP_945877.1 39933601 2689270 complement(584622..585548) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; polyprenyl synthetase 585548 2689270 RPA0524 Rhodopseudomonas palustris CGA009 polyprenyl synthetase NP_945877.1 584622 R 258594 CDS NP_945878.1 39933602 2688763 585650..586360 1 NC_005296.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 586360 mtgA 2688763 mtgA Rhodopseudomonas palustris CGA009 monofunctional biosynthetic peptidoglycan transglycosylase NP_945878.1 585650 D 258594 CDS NP_945879.1 39933603 2691644 586522..586704 1 NC_005296.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 586704 rpmF 2691644 rpmF Rhodopseudomonas palustris CGA009 50S ribosomal protein L32 NP_945879.1 586522 D 258594 CDS NP_945880.1 39933604 2691641 586947..587579 1 NC_005296.1 hypothetical protein 587579 2691641 RPA0527 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945880.1 586947 D 258594 CDS NP_945881.1 39933605 2689264 complement(587596..588057) 1 NC_005296.1 hypothetical protein 588057 2689264 RPA0528 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945881.1 587596 R 258594 CDS NP_945882.1 39933606 2689262 588149..589891 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; diguanylate cyclase/phosphodiesterase 589891 2689262 RPA0529 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_945882.1 588149 D 258594 CDS NP_945883.1 39933607 2689817 complement(590022..590690) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; polyhydroxyalkanoate synthesis repressor PhaR 590690 2689817 RPA0530 Rhodopseudomonas palustris CGA009 polyhydroxyalkanoate synthesis repressor PhaR NP_945883.1 590022 R 258594 CDS NP_945884.1 39933608 2693149 590894..592072 1 NC_005296.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 592072 2693149 RPA0531 Rhodopseudomonas palustris CGA009 acetyl-CoA acetyltransferase NP_945884.1 590894 D 258594 CDS NP_945885.1 39933609 2689263 592255..592980 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acetoacetyl-CoA reductase 592980 2689263 RPA0532 Rhodopseudomonas palustris CGA009 acetoacetyl-CoA reductase NP_945885.1 592255 D 258594 CDS NP_945886.1 39933610 2689261 593057..593923 1 NC_005296.1 hypothetical protein 593923 2689261 RPA0533 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945886.1 593057 D 258594 CDS NP_945887.1 39933611 2693122 complement(593943..594464) 1 NC_005296.1 hypothetical protein 594464 2693122 RPA0534 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945887.1 593943 R 258594 CDS NP_945888.1 39933612 2689314 complement(594594..597071) 1 NC_005296.1 ATP-dependent helicase HrpB 597071 hrpB 2689314 hrpB Rhodopseudomonas palustris CGA009 ATP-dependent helicase HrpB NP_945888.1 594594 R 258594 CDS NP_945889.1 39933613 2691659 597245..598297 1 NC_005296.1 acyltransferase 598297 2691659 RPA0536 Rhodopseudomonas palustris CGA009 acyltransferase NP_945889.1 597245 D 258594 CDS NP_945890.1 39933614 2689613 complement(598415..599974) 1 NC_005296.1 acetyl-CoA hydrolase 599974 2689613 RPA0537 Rhodopseudomonas palustris CGA009 acetyl-CoA hydrolase NP_945890.1 598415 R 258594 CDS NP_945891.1 39933615 2689259 complement(600714..602168) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Omp2b porin 602168 2689259 RPA0538 Rhodopseudomonas palustris CGA009 Omp2b porin NP_945891.1 600714 R 258594 CDS NP_945892.1 39933616 2689251 602737..603270 1 NC_005296.1 MarR family transcriptional regulator 603270 2689251 RPA0539 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_945892.1 602737 D 258594 CDS NP_945893.1 39933617 2689256 complement(603265..604290) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 604290 2689256 RPA0540 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945893.1 603265 R 258594 CDS NP_945894.1 39933618 2688759 604854..605402 1 NC_005296.1 hypothetical protein 605402 2688759 RPA0541 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945894.1 604854 D 258594 CDS NP_945895.1 39933619 2689871 complement(605405..606457) 1 NC_005296.1 hypothetical protein 606457 2689871 RPA0542 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945895.1 605405 R 258594 CDS NP_945896.1 39933620 2689869 606652..607179 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 607179 2689869 RPA0543 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945896.1 606652 D 258594 CDS NP_945897.1 39933621 2689866 607333..607716 1 NC_005296.1 hypothetical protein 607716 2689866 RPA0544 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945897.1 607333 D 258594 CDS NP_945898.1 39933622 2689862 607713..608435 1 NC_005296.1 LrgB-like protein 608435 2689862 RPA0545 Rhodopseudomonas palustris CGA009 LrgB-like protein NP_945898.1 607713 D 258594 CDS NP_945899.1 39933623 2691658 608530..608994 1 NC_005296.1 hypothetical protein 608994 2691658 RPA0546 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945899.1 608530 D 258594 CDS NP_945900.1 39933624 2689246 complement(608998..610074) 1 NC_005296.1 hypothetical protein 610074 2689246 RPA0547 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945900.1 608998 R 258594 CDS NP_945901.1 39933625 2689247 610257..611417 1 NC_005296.1 hypothetical protein 611417 2689247 RPA0548 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945901.1 610257 D 258594 CDS NP_945902.1 39933626 2689232 complement(611414..612076) 1 NC_005296.1 sensor protein ChrR cytochrome cycA regulator 612076 ChrR 2689232 ChrR Rhodopseudomonas palustris CGA009 sensor protein ChrR cytochrome cycA regulator NP_945902.1 611414 R 258594 CDS NP_945903.1 39933627 2691382 complement(612073..612660) 1 NC_005296.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 612660 2691382 RPA0550 Rhodopseudomonas palustris CGA009 RNA polymerase sigma factor RpoE NP_945903.1 612073 R 258594 CDS NP_945904.1 39933628 2689238 complement(613289..614170) 1 NC_005296.1 LysR family transcriptional regulator 614170 2689238 RPA0551 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_945904.1 613289 R 258594 CDS NP_945905.1 39933629 2689358 614276..615583 1 NC_005296.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 615583 dctA1 2689358 dctA1 Rhodopseudomonas palustris CGA009 C4-dicarboxylate transporter DctA NP_945905.1 614276 D 258594 CDS NP_945906.1 39933630 2689228 615621..616460 1 NC_005296.1 hypothetical protein 616460 2689228 RPA0553 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945906.1 615621 D 258594 CDS NP_945907.1 39933631 2689353 616457..616969 1 NC_005296.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 616969 2689353 RPA0554 Rhodopseudomonas palustris CGA009 ureidoglycolate hydrolase NP_945907.1 616457 D 258594 CDS NP_945908.1 39933632 2689704 complement(617018..617614) 1 NC_005296.1 methyltransferase 617614 2689704 RPA0555 Rhodopseudomonas palustris CGA009 methyltransferase NP_945908.1 617018 R 258594 CDS NP_945909.1 39933633 2689352 complement(617758..618315) 1 NC_005296.1 HNH endonuclease 618315 2689352 RPA0556 Rhodopseudomonas palustris CGA009 HNH endonuclease NP_945909.1 617758 R 258594 CDS NP_945910.1 39933634 2689604 618596..619594 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cysteine synthase 619594 cysK 2689604 cysK Rhodopseudomonas palustris CGA009 cysteine synthase NP_945910.1 618596 D 258594 CDS NP_945911.1 39933635 2691372 complement(619666..620583) 1 NC_005296.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 620583 hemH 2691372 hemH Rhodopseudomonas palustris CGA009 phosphoribosylaminoimidazole-succinocarboxamide synthase NP_945911.1 619666 R 258594 CDS NP_945912.1 39933636 2689227 complement(620654..621571) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pirin 621571 2689227 RPA0559 Rhodopseudomonas palustris CGA009 pirin NP_945912.1 620654 R 258594 CDS NP_945913.1 39933637 2689225 complement(621701..623131) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; malonyl-CoA decarboxylase 623131 MLYCD 2689225 MLYCD Rhodopseudomonas palustris CGA009 malonyl-CoA decarboxylase NP_945913.1 621701 R 258594 CDS NP_945914.1 39933638 2689223 complement(623297..623902) 1 NC_005296.1 hypothetical protein 623902 2689223 RPA0561 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945914.1 623297 R 258594 CDS NP_945915.1 39933639 2689584 complement(623978..625342) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; MmgE/PrpD family protein 625342 2689584 RPA0562 Rhodopseudomonas palustris CGA009 MmgE/PrpD family protein NP_945915.1 623978 R 258594 CDS NP_945916.1 39933640 2689583 625468..626625 1 NC_005296.1 hypothetical protein 626625 2689583 RPA0563 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945916.1 625468 D 258594 CDS NP_945917.1 39933641 2689857 complement(626630..627091) 1 NC_005296.1 hypothetical protein 627091 2689857 RPA0564 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945917.1 626630 R 258594 CDS NP_945918.1 39933642 2693143 627895..629082 1 NC_005296.1 esterase 629082 2693143 RPA0565 Rhodopseudomonas palustris CGA009 esterase NP_945918.1 627895 D 258594 CDS NP_945919.1 39933643 2689603 629211..629630 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 629630 2689603 RPA0566 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945919.1 629211 D 258594 CDS NP_945920.1 39933644 2689599 complement(629707..630684) 1 NC_005296.1 AraC family transcriptional regulator 630684 2689599 RPA0567 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_945920.1 629707 R 258594 CDS NP_945921.1 39933645 2689875 complement(630945..631610) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydrolase 631610 2689875 RPA0568 Rhodopseudomonas palustris CGA009 hydrolase NP_945921.1 630945 R 258594 CDS NP_945922.1 39933646 2693139 complement(631700..632818) 1 NC_005296.1 hypothetical protein 632818 2693139 RPA0569 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945922.1 631700 R 258594 CDS NP_945923.1 39933647 2693133 632974..633453 1 NC_005296.1 hypothetical protein 633453 2693133 RPA0570 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945923.1 632974 D 258594 CDS NP_945924.1 39933648 2689218 complement(633579..634133) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Fis family transcriptional regulator 634133 regR 2689218 regR Rhodopseudomonas palustris CGA009 Fis family transcriptional regulator NP_945924.1 633579 R 258594 CDS NP_945925.1 39933649 2688785 complement(634225..635547) 1 NC_005296.1 sensor signal transduction histidine kinase 635547 regS 2688785 regS Rhodopseudomonas palustris CGA009 sensor signal transduction histidine kinase NP_945925.1 634225 R 258594 CDS NP_945926.1 39933650 2689214 635655..636452 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter ATP-binding protein 636452 2689214 RPA0573 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_945926.1 635655 D 258594 CDS NP_945927.1 39933651 2689653 636449..637279 1 NC_005296.1 hypothetical protein 637279 2689653 RPA0574 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945927.1 636449 D 258594 CDS NP_945928.1 39933652 2689213 637418..638746 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; polyhydroxyalkanoate depolymerase 638746 2689213 RPA0575 Rhodopseudomonas palustris CGA009 polyhydroxyalkanoate depolymerase NP_945928.1 637418 D 258594 CDS NP_945929.1 39933653 2689651 639003..639836 1 NC_005296.1 hypothetical protein 639836 2689651 RPA0576 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945929.1 639003 D 258594 CDS NP_945930.1 39933654 2689618 complement(640106..642052) 1 NC_005296.1 penicillin-binding protein 1A 642052 2689618 RPA0577 Rhodopseudomonas palustris CGA009 penicillin-binding protein 1A NP_945930.1 640106 R 258594 CDS NP_945931.1 39933655 2689852 642505..642759 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 642759 2689852 RPA0578 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945931.1 642505 D 258594 CDS NP_945932.1 39933656 2689418 complement(642855..643067) 1 NC_005296.1 hypothetical protein 643067 2689418 RPA0579 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945932.1 642855 R 258594 CDS NP_945933.1 39933657 2689208 complement(643359..644579) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter amino acid-binding protein 644579 2689208 RPA0580 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter amino acid-binding protein NP_945933.1 643359 R 258594 CDS NP_945934.1 39933658 2689581 complement(644730..645092) 1 NC_005296.1 hypothetical protein 645092 2689581 RPA0581 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945934.1 644730 R 258594 CDS NP_945935.1 39933659 2688783 645175..645603 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 645603 2688783 RPA0582 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945935.1 645175 D 258594 CDS NP_945936.1 39933660 2689206 645698..648439 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sensor histidine kinase 648439 2689206 RPA0583 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_945936.1 645698 D 258594 CDS NP_945937.1 39933661 2689412 648631..650967 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; RNA binding S1 650967 2689412 RPA0584 Rhodopseudomonas palustris CGA009 RNA binding S1 NP_945937.1 648631 D 258594 CDS NP_945938.1 39933662 2689414 complement(650990..652144) 1 NC_005296.1 chromate transporter 652144 2689414 RPA0585 Rhodopseudomonas palustris CGA009 chromate transporter NP_945938.1 650990 R 258594 CDS NP_945939.1 39933663 2689119 complement(652210..653103) 1 NC_005296.1 short-chain dehydrogenase/reductase SDR 653103 2689119 RPA0586 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_945939.1 652210 R 258594 CDS NP_945940.1 39933664 2693082 complement(653133..654614) 1 NC_005296.1 cationic amino acid transporter 654614 2693082 RPA0587 Rhodopseudomonas palustris CGA009 cationic amino acid transporter NP_945940.1 653133 R 258594 CDS NP_945941.1 39933665 2692898 complement(654655..655335) 1 NC_005296.1 TetR family transcriptional regulator 655335 2692898 RPA0588 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_945941.1 654655 R 258594 CDS NP_945942.1 39933666 2692922 655430..657097 1 NC_005296.1 acyl-CoA dehydrogenase 657097 2692922 RPA0589 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_945942.1 655430 D 258594 CDS NP_945943.1 39933667 2693013 complement(657260..658600) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carboxyl-terminal protease 658600 prc 2693013 prc Rhodopseudomonas palustris CGA009 carboxyl-terminal protease NP_945943.1 657260 R 258594 CDS NP_945944.1 39933668 2692917 complement(658764..661613) 1 NC_005296.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 661613 glnD 2692917 glnD Rhodopseudomonas palustris CGA009 PII uridylyl-transferase NP_945944.1 658764 R 258594 CDS NP_945945.1 39933669 2693017 661788..663029 1 NC_005296.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 663029 argJ 2693017 argJ Rhodopseudomonas palustris CGA009 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase NP_945945.1 661788 D 258594 CDS NP_945946.1 39933670 2692593 663026..663523 1 NC_005296.1 hypothetical protein 663523 2692593 RPA0593 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945946.1 663026 D 258594 CDS NP_945947.1 39933671 2689381 663531..663932 1 NC_005296.1 mutator protein mutT 663932 mutT 2689381 mutT Rhodopseudomonas palustris CGA009 mutator protein mutT NP_945947.1 663531 D 258594 CDS NP_945948.1 39933672 2692976 complement(664109..664933) 1 NC_005296.1 hypothetical protein 664933 2692976 RPA0595 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945948.1 664109 R 258594 CDS NP_945949.1 39933673 2689572 complement(664960..665259) 1 NC_005296.1 hypothetical protein 665259 2689572 RPA0596 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945949.1 664960 R 258594 CDS NP_945950.1 39933674 2692950 665365..666180 1 NC_005296.1 phosphoribosyltransferase 666180 2692950 RPA0597 Rhodopseudomonas palustris CGA009 phosphoribosyltransferase NP_945950.1 665365 D 258594 CDS NP_945951.1 39933675 2689935 666223..666498 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutaredoxin GrxC 666498 2689935 RPA0598 Rhodopseudomonas palustris CGA009 glutaredoxin GrxC NP_945951.1 666223 D 258594 CDS NP_945952.1 39933676 2692979 666495..667370 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 667370 2692979 RPA0599 Rhodopseudomonas palustris CGA009 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase NP_945952.1 666495 D 258594 CDS NP_945953.1 39933677 2692909 667367..667861 1 NC_005296.1 hypothetical protein 667861 2692909 RPA0600 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945953.1 667367 D 258594 CDS NP_945954.1 39933678 2692901 668083..668520 1 NC_005296.1 DMT family permease 668520 2692901 RPA0601 Rhodopseudomonas palustris CGA009 DMT family permease NP_945954.1 668083 D 258594 CDS NP_945955.1 39933679 2689533 complement(668521..669420) 1 NC_005296.1 DMT family permease 669420 2689533 RPA0602 Rhodopseudomonas palustris CGA009 DMT family permease NP_945955.1 668521 R 258594 CDS NP_945956.1 39933680 2692775 complement(669548..670330) 1 NC_005296.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 670330 ubiG 2692775 ubiG Rhodopseudomonas palustris CGA009 3-demethylubiquinone-9 3-methyltransferase NP_945956.1 669548 R 258594 CDS NP_945957.1 39933681 2692928 670503..671756 1 NC_005296.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 671756 lysC 2692928 lysC Rhodopseudomonas palustris CGA009 aspartate kinase NP_945957.1 670503 D 258594 CDS NP_945958.1 39933682 2692864 671957..674359 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 674359 ptsP 2692864 ptsP Rhodopseudomonas palustris CGA009 hypothetical protein NP_945958.1 671957 D 258594 CDS NP_945959.1 39933683 2689380 674416..675501 1 NC_005296.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 675501 prfA 2689380 prfA Rhodopseudomonas palustris CGA009 peptide chain release factor 1 NP_945959.1 674416 D 258594 CDS NP_945960.1 39933684 2689363 675498..676367 1 NC_005296.1 HemK family modification methylase 676367 hemK 2689363 hemK Rhodopseudomonas palustris CGA009 HemK family modification methylase NP_945960.1 675498 D 258594 CDS NP_945961.1 39933685 2689037 676819..677514 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 677514 2689037 RPA0608 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945961.1 676819 D 258594 CDS NP_945962.1 39933686 2692891 complement(677617..678396) 1 NC_005296.1 type 11 methyltransferase 678396 2692891 RPA0609 Rhodopseudomonas palustris CGA009 type 11 methyltransferase NP_945962.1 677617 R 258594 CDS NP_945963.1 39933687 2692749 678565..679332 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydroxyacylglutathione hydrolase 679332 2692749 RPA0610 Rhodopseudomonas palustris CGA009 hydroxyacylglutathione hydrolase NP_945963.1 678565 D 258594 CDS NP_945964.1 39933688 2689791 679329..679766 1 NC_005296.1 hypothetical protein 679766 2689791 RPA0611 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945964.1 679329 D 258594 CDS NP_945965.1 39933689 2692875 complement(679887..680825) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; PfkB protein 680825 2692875 RPA0612 Rhodopseudomonas palustris CGA009 PfkB protein NP_945965.1 679887 R 258594 CDS NP_945966.1 39933690 2689905 complement(680822..681754) 1 NC_005296.1 NUDIX hydrolase 681754 2689905 RPA0613 Rhodopseudomonas palustris CGA009 NUDIX hydrolase NP_945966.1 680822 R 258594 CDS NP_945967.1 39933691 2689384 complement(681759..682256) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; histidine triad (HIT) protein 682256 2689384 RPA0614 Rhodopseudomonas palustris CGA009 histidine triad (HIT) protein NP_945967.1 681759 R 258594 CDS NP_945968.1 39933692 2692691 682649..684520 1 NC_005296.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 684520 dnaX 2692691 dnaX Rhodopseudomonas palustris CGA009 DNA polymerase III subunits gamma and tau NP_945968.1 682649 D 258594 CDS NP_945969.1 39933693 2692740 684542..684862 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 684862 2692740 RPA0616 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945969.1 684542 D 258594 CDS NP_945970.1 39933694 2692736 684958..685560 1 NC_005296.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 685560 recR 2692736 recR Rhodopseudomonas palustris CGA009 recombination protein RecR NP_945970.1 684958 D 258594 CDS NP_945971.1 39933695 2692727 685580..686008 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 686008 2692727 RPA0618 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945971.1 685580 D 258594 CDS NP_945972.1 39933696 2692754 complement(686049..687347) 1 NC_005296.1 E. coli beta lactamase (AmpC) regulator; major facilitator transporter 687347 ampG 2692754 ampG Rhodopseudomonas palustris CGA009 major facilitator transporter NP_945972.1 686049 R 258594 CDS NP_945973.1 39933697 2692858 complement(687496..688728) 1 NC_005296.1 hypothetical protein 688728 2692858 RPA0620 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945973.1 687496 R 258594 CDS NP_945974.1 39933698 2692860 688848..689375 1 NC_005296.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 689375 def 2692860 def Rhodopseudomonas palustris CGA009 peptide deformylase NP_945974.1 688848 D 258594 CDS NP_945975.1 39933699 2692848 689454..690386 1 NC_005296.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 690386 fmt 2692848 fmt Rhodopseudomonas palustris CGA009 methionyl-tRNA formyltransferase NP_945975.1 689454 D 258594 CDS NP_945976.1 39933700 2692836 690564..691310 1 NC_005296.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 691310 truA 2692836 truA Rhodopseudomonas palustris CGA009 tRNA pseudouridine synthase A NP_945976.1 690564 D 258594 CDS NP_945977.1 39933701 2688853 complement(691642..692805) 1 NC_005296.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 692805 dapE 2688853 dapE Rhodopseudomonas palustris CGA009 succinyl-diaminopimelate desuccinylase NP_945977.1 691642 R 258594 CDS NP_945978.1 39933702 2692734 complement(692805..693278) 1 NC_005296.1 hypothetical protein 693278 2692734 RPA0625 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945978.1 692805 R 258594 CDS NP_945979.1 39933703 2692704 complement(693297..694142) 1 NC_005296.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 694142 dapD 2692704 dapD Rhodopseudomonas palustris CGA009 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase NP_945979.1 693297 R 258594 CDS NP_945980.1 39933704 2692715 complement(694327..695028) 1 NC_005296.1 haloacid dehalogenase 695028 2692715 RPA0627 Rhodopseudomonas palustris CGA009 haloacid dehalogenase NP_945980.1 694327 R 258594 CDS NP_945981.1 39933705 2692770 complement(695025..696146) 1 NC_005296.1 hypothetical protein 696146 2692770 RPA0628 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945981.1 695025 R 258594 CDS NP_945982.1 39933706 2692700 complement(696146..697042) 1 NC_005296.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 697042 argB 2692700 argB Rhodopseudomonas palustris CGA009 acetylglutamate kinase NP_945982.1 696146 R 258594 CDS NP_945983.1 39933707 2691468 complement(697167..697535) 1 NC_005296.1 hypothetical protein 697535 2691468 RPA0630 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945983.1 697167 R 258594 CDS NP_945984.1 39933708 2692765 complement(697535..698185) 1 NC_005296.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 698185 engB 2692765 engB Rhodopseudomonas palustris CGA009 ribosome biogenesis GTP-binding protein YsxC NP_945984.1 697535 R 258594 CDS NP_945985.1 39933709 2691451 complement(698337..700205) 1 NC_005296.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 700205 2691451 RPA0632 Rhodopseudomonas palustris CGA009 inner membrane protein translocase component YidC NP_945985.1 698337 R 258594 CDS NP_945986.1 39933710 2692722 complement(700222..700563) 1 NC_005296.1 ribonuclease P protein component 700563 rnpA 2692722 rnpA Rhodopseudomonas palustris CGA009 ribonuclease P protein component NP_945986.1 700222 R 258594 CDS NP_945987.1 39933711 2692665 complement(700587..700721) 1 NC_005296.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 700721 rpmH 2692665 rpmH Rhodopseudomonas palustris CGA009 50S ribosomal protein L34 NP_945987.1 700587 R 258594 CDS NP_945988.1 39933712 2692648 701052..702530 1 NC_005296.1 sensor histidine kinase 702530 2692648 RPA0635 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_945988.1 701052 D 258594 CDS NP_945989.1 39933713 2692459 complement(702970..703479) 1 NC_005296.1 hypothetical protein 703479 2692459 RPA0636 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945989.1 702970 R 258594 CDS NP_945990.1 39933714 2692556 complement(703506..704834) 1 NC_005296.1 hypothetical protein 704834 2692556 RPA0637 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945990.1 703506 R 258594 CDS NP_945991.1 39933715 2692677 complement(704911..707313) 1 NC_005296.1 hypothetical protein 707313 2692677 RPA0638 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945991.1 704911 R 258594 CDS NP_945992.1 39933716 2692666 707816..708514 1 NC_005296.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 708514 sigE 2692666 sigE Rhodopseudomonas palustris CGA009 RNA polymerase sigma factor NP_945992.1 707816 D 258594 CDS NP_945993.1 39933717 2691446 708657..709481 1 NC_005296.1 flagellin 709481 fliC 2691446 fliC Rhodopseudomonas palustris CGA009 flagellin NP_945993.1 708657 D 258594 CDS NP_945994.1 39933718 2692485 709543..711258 1 NC_005296.1 flagellar hook-associated protein 2 FliD 711258 fliD 2692485 fliD Rhodopseudomonas palustris CGA009 flagellar hook-associated protein 2 FliD NP_945994.1 709543 D 258594 CDS NP_945995.1 39933719 2692643 711258..711650 1 NC_005296.1 hypothetical protein 711650 2692643 RPA0642 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945995.1 711258 D 258594 CDS NP_945996.1 39933720 2692694 711650..712045 1 NC_005296.1 hypothetical protein 712045 2692694 RPA0643 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945996.1 711650 D 258594 CDS NP_945997.1 39933721 2692369 712294..713091 1 NC_005296.1 basal-body rod modification protein flgD 713091 flgD 2692369 flgD Rhodopseudomonas palustris CGA009 basal-body rod modification protein flgD NP_945997.1 712294 D 258594 CDS NP_945998.1 39933722 2692686 713111..714376 1 NC_005296.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 714376 flgE 2692686 flgE Rhodopseudomonas palustris CGA009 flagellar hook protein FlgE NP_945998.1 713111 D 258594 CDS NP_945999.1 39933723 2692649 714382..714639 1 NC_005296.1 hypothetical protein 714639 2692649 RPA0646 Rhodopseudomonas palustris CGA009 hypothetical protein NP_945999.1 714382 D 258594 CDS NP_946000.1 39933724 2692575 714655..715116 1 NC_005296.1 hypothetical protein 715116 2692575 RPA0647 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946000.1 714655 D 258594 CDS NP_946001.1 39933725 2692429 715138..716901 1 NC_005296.1 flagellar hook-associated protein 1 FlgK 716901 flgK1 2692429 flgK1 Rhodopseudomonas palustris CGA009 flagellar hook-associated protein 1 FlgK NP_946001.1 715138 D 258594 CDS NP_946002.1 39933726 2692597 716917..717828 1 NC_005296.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 717828 flgL 2692597 flgL Rhodopseudomonas palustris CGA009 flagellar hook-associated protein FlgL NP_946002.1 716917 D 258594 CDS NP_946003.1 39933727 2692580 complement(717848..718624) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cyclohex-1-ene-1-carboxyl-CoA hydratase 718624 badK 2692580 badK Rhodopseudomonas palustris CGA009 cyclohex-1-ene-1-carboxyl-CoA hydratase NP_946003.1 717848 R 258594 CDS NP_946004.1 39933728 2692160 complement(718652..720295) 1 NC_005296.1 AliA; in Rhodopseudomonas palustris, this enzyme was found to act on 3-chlorobenzoate and allows the organism to grow on this substrate; cyclohexanecarboxylate-CoA ligase 720295 aliA 2692160 aliA Rhodopseudomonas palustris CGA009 cyclohexanecarboxylate-CoA ligase NP_946004.1 718652 R 258594 CDS NP_946005.1 39933729 2689019 complement(720352..721503) 1 NC_005296.1 cyclohexanecarboxyl-CoA dehydrogenase 721503 aliB 2689019 aliB Rhodopseudomonas palustris CGA009 cyclohexanecarboxyl-CoA dehydrogenase NP_946005.1 720352 R 258594 CDS NP_946006.1 39933730 2692496 complement(721568..722350) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-ketocyclohexanecarboxyl-CoA hydrolase 722350 badI 2692496 badI Rhodopseudomonas palustris CGA009 2-ketocyclohexanecarboxyl-CoA hydrolase NP_946006.1 721568 R 258594 CDS NP_946007.1 39933731 2692564 complement(722381..723148) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase 723148 badH 2692564 badH Rhodopseudomonas palustris CGA009 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase NP_946007.1 722381 R 258594 CDS NP_946008.1 39933732 2692633 723271..723798 1 NC_005296.1 benzoate anaerobic degradation transcription regulator BadR 723798 badR 2692633 badR Rhodopseudomonas palustris CGA009 benzoate anaerobic degradation transcription regulator BadR NP_946008.1 723271 D 258594 CDS NP_946009.1 39933733 2692631 723872..724891 1 NC_005296.1 alcohol dehydrogenase 724891 badC 2692631 badC Rhodopseudomonas palustris CGA009 alcohol dehydrogenase NP_946009.1 723872 D 258594 CDS NP_946010.1 39933734 2689078 725062..726246 1 NC_005296.1 benzoyl-CoA reductase subunit 726246 badD 2689078 badD Rhodopseudomonas palustris CGA009 benzoyl-CoA reductase subunit NP_946010.1 725062 D 258594 CDS NP_946011.1 39933735 2692639 726243..727553 1 NC_005296.1 benzoyl-CoA reductase subunit 727553 badE 2692639 badE Rhodopseudomonas palustris CGA009 benzoyl-CoA reductase subunit NP_946011.1 726243 D 258594 CDS NP_946012.1 39933736 2692365 727565..728878 1 NC_005296.1 benzoyl-CoA reductase subunit 728878 badF 2692365 badF Rhodopseudomonas palustris CGA009 benzoyl-CoA reductase subunit NP_946012.1 727565 D 258594 CDS NP_946013.1 39933737 2692625 728971..729804 1 NC_005296.1 benzoyl-CoA reductase subunit 729804 badG 2692625 badG Rhodopseudomonas palustris CGA009 benzoyl-CoA reductase subunit NP_946013.1 728971 D 258594 CDS NP_946014.1 39933738 2692583 729921..731495 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; benzoate-CoA ligase 731495 badA 2692583 badA Rhodopseudomonas palustris CGA009 benzoate-CoA ligase NP_946014.1 729921 D 258594 CDS NP_946015.1 39933739 2692554 731512..731757 1 NC_005296.1 ferredoxin 731757 badB 2692554 badB Rhodopseudomonas palustris CGA009 ferredoxin NP_946015.1 731512 D 258594 CDS NP_946016.1 39933740 2692371 complement(731806..732276) 1 NC_005296.1 transcriptional regulator BadM 732276 badM 2692371 badM Rhodopseudomonas palustris CGA009 transcriptional regulator BadM NP_946016.1 731806 R 258594 CDS NP_946017.1 39933741 2692490 complement(732331..732810) 1 NC_005296.1 acetyltransferase 732810 badL 2692490 badL Rhodopseudomonas palustris CGA009 acetyltransferase NP_946017.1 732331 R 258594 CDS NP_946018.1 39933742 2692548 complement(732909..733631) 1 NC_005296.1 ABC transporter ATP-binding protein 733631 hbaH 2692548 hbaH Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946018.1 732909 R 258594 CDS NP_946019.1 39933743 2692449 complement(733628..735415) 1 NC_005296.1 ABC transporter ATP-binding protein 735415 hbaG 2692449 hbaG Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946019.1 733628 R 258594 CDS NP_946020.1 39933744 2692578 complement(735418..736278) 1 NC_005296.1 inner-membrane translocator 736278 hbaF 2692578 hbaF Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_946020.1 735418 R 258594 CDS NP_946021.1 39933745 2692506 complement(736364..737542) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter subunit substrate-binding component 737542 hbaE 2692506 hbaE Rhodopseudomonas palustris CGA009 ABC transporter subunit substrate-binding component NP_946021.1 736364 R 258594 CDS NP_946022.1 39933746 2691277 complement(737719..739338) 1 NC_005296.1 4-hydroxybenzoate-CoA ligase 739338 hbaA 2691277 hbaA Rhodopseudomonas palustris CGA009 4-hydroxybenzoate-CoA ligase NP_946022.1 737719 R 258594 CDS NP_946023.1 39933747 2692517 739505..739996 1 NC_005296.1 4-hydroxybenzoyl-CoA reductase subunit 739996 hbaB 2692517 hbaB Rhodopseudomonas palustris CGA009 4-hydroxybenzoyl-CoA reductase subunit NP_946023.1 739505 D 258594 CDS NP_946024.1 39933748 2688970 739993..742326 1 NC_005296.1 4-hydroxybenzoyl-CoA reductase subunit 742326 hbaC 2688970 hbaC Rhodopseudomonas palustris CGA009 4-hydroxybenzoyl-CoA reductase subunit NP_946024.1 739993 D 258594 CDS NP_946025.1 39933749 2692479 742323..743306 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 4-hydroxybenzoyl-CoA reductase subunit 743306 hbaD 2692479 hbaD Rhodopseudomonas palustris CGA009 4-hydroxybenzoyl-CoA reductase subunit NP_946025.1 742323 D 258594 CDS NP_946026.1 39933750 2692455 complement(743331..744056) 1 NC_005296.1 hydroxybenzoate anaerobic degradation regulatory protein HbaR 744056 hbaR 2692455 hbaR Rhodopseudomonas palustris CGA009 hydroxybenzoate anaerobic degradation regulatory protein HbaR NP_946026.1 743331 R 258594 CDS NP_946027.1 39933751 2692475 744248..745360 1 NC_005296.1 alcohol dehydrogenase 745360 2692475 RPA0674 Rhodopseudomonas palustris CGA009 alcohol dehydrogenase NP_946027.1 744248 D 258594 CDS NP_946028.1 39933752 2692498 745396..746217 1 NC_005296.1 alpha/beta hydrolase 746217 2692498 RPA0675 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase NP_946028.1 745396 D 258594 CDS NP_946029.1 39933753 2692493 746346..748040 1 NC_005296.1 cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA; benzoyl-CoA-dihydrodiol lyase 748040 2692493 RPA0676 Rhodopseudomonas palustris CGA009 benzoyl-CoA-dihydrodiol lyase NP_946029.1 746346 D 258594 CDS NP_946030.1 39933754 2692324 748211..749662 1 NC_005296.1 hypothetical protein 749662 2692324 RPA0677 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946030.1 748211 D 258594 CDS NP_946031.2 161610778 2692460 749989..752973 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein 752973 gltA 2692460 gltA Rhodopseudomonas palustris CGA009 trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein NP_946031.2 749989 D 258594 CDS NP_946032.1 39933756 2692422 complement(752997..755030) 1 NC_005296.1 hypothetical protein 755030 2692422 RPA0679 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946032.1 752997 R 258594 CDS NP_946033.1 39933757 2692461 complement(755097..755714) 1 NC_005296.1 TetR family transcriptional regulator 755714 2692461 RPA0680 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_946033.1 755097 R 258594 CDS NP_946034.1 39933758 2692134 755856..756890 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; permease 756890 2692134 RPA0681 Rhodopseudomonas palustris CGA009 permease NP_946034.1 755856 D 258594 CDS NP_946035.1 39933759 2688755 756887..759601 1 NC_005296.1 ABC transporter ATP-binding protein 759601 2688755 RPA0682 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946035.1 756887 D 258594 CDS NP_946036.1 39933760 2692189 759598..760731 1 NC_005296.1 ABC transporter permease 760731 2692189 RPA0683 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_946036.1 759598 D 258594 CDS NP_946037.1 39933761 2692222 complement(760739..760918) 1 NC_005296.1 hypothetical protein 760918 2692222 RPA0684 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946037.1 760739 R 258594 CDS NP_946038.1 39933762 2692259 761061..761936 1 NC_005296.1 IclR family transcriptional regulator 761936 2692259 RPA0685 Rhodopseudomonas palustris CGA009 IclR family transcriptional regulator NP_946038.1 761061 D 258594 CDS NP_946039.1 39933763 2692426 762097..763071 1 NC_005296.1 hypothetical protein 763071 2692426 RPA0686 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946039.1 762097 D 258594 CDS NP_946040.1 39933764 2692420 complement(763121..763768) 1 NC_005296.1 hypothetical protein 763768 2692420 RPA0687 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946040.1 763121 R 258594 CDS NP_946041.1 39933765 2692378 complement(763749..764333) 1 NC_005296.1 phosphonate metabolism 1,5-bisphosphokinase (PRPP-forming) PhnN 764333 phnN 2692378 phnN Rhodopseudomonas palustris CGA009 phosphonate metabolism 1,5-bisphosphokinase (PRPP-forming) PhnN NP_946041.1 763749 R 258594 CDS NP_946042.1 39933766 2692407 complement(764330..765466) 1 NC_005296.1 E. coli PhnM, HisM-like integral membrane protein; phosphonate utilization (C-P lyase) component 765466 phnM1 2692407 phnM1 Rhodopseudomonas palustris CGA009 phosphonate utilization (C-P lyase) component NP_946042.1 764330 R 258594 CDS NP_946043.1 39933767 2692397 complement(765505..766209) 1 NC_005296.1 phosphonate ABC transporter ATP-binding protein 766209 phnL 2692397 phnL Rhodopseudomonas palustris CGA009 phosphonate ABC transporter ATP-binding protein NP_946043.1 765505 R 258594 CDS NP_946044.1 39933768 2692400 complement(766215..767033) 1 NC_005296.1 phosphonate C-P lyase system protein PhnK 767033 phnK 2692400 phnK Rhodopseudomonas palustris CGA009 phosphonate C-P lyase system protein PhnK NP_946044.1 766215 R 258594 CDS NP_946045.1 39933769 2692351 complement(767026..767904) 1 NC_005296.1 phosphonate metabolism PhnJ 767904 phnJ 2692351 phnJ Rhodopseudomonas palustris CGA009 phosphonate metabolism PhnJ NP_946045.1 767026 R 258594 CDS NP_946046.1 39933770 2692344 complement(767901..768998) 1 NC_005296.1 phosphonate metabolism protein 768998 phnI 2692344 phnI Rhodopseudomonas palustris CGA009 phosphonate metabolism protein NP_946046.1 767901 R 258594 CDS NP_946047.1 39933771 2692352 complement(769002..769604) 1 NC_005296.1 carbon-phosphorus lyase complex subunit 769604 phnH 2692352 phnH Rhodopseudomonas palustris CGA009 carbon-phosphorus lyase complex subunit NP_946047.1 769002 R 258594 CDS NP_946048.1 39933772 2692343 complement(769607..770080) 1 NC_005296.1 phosphonate metabolism PhnG 770080 phnG 2692343 phnG Rhodopseudomonas palustris CGA009 phosphonate metabolism PhnG NP_946048.1 769607 R 258594 CDS NP_946049.1 39933773 2692303 770192..770920 1 NC_005296.1 GntR family transcriptional regulator 770920 2692303 RPA0696 Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_946049.1 770192 D 258594 CDS NP_946050.1 39933774 2692143 complement(771245..772111) 1 NC_005296.1 phosphonate ABC transporter permease 772111 phnE1 2692143 phnE1 Rhodopseudomonas palustris CGA009 phosphonate ABC transporter permease NP_946050.1 771245 R 258594 CDS NP_946051.1 39933775 2691425 complement(772108..772989) 1 NC_005296.1 phosphonate ABC transporter permease 772989 phnE2 2691425 phnE2 Rhodopseudomonas palustris CGA009 phosphonate ABC transporter permease NP_946051.1 772108 R 258594 CDS NP_946052.1 39933776 2692372 complement(773058..773966) 1 NC_005296.1 phosphonate ABC transporter periplasmic phosphonate-binding protein 773966 phnD 2692372 phnD Rhodopseudomonas palustris CGA009 phosphonate ABC transporter periplasmic phosphonate-binding protein NP_946052.1 773058 R 258594 CDS NP_946053.1 39933777 2692335 complement(774076..774888) 1 NC_005296.1 phosphonate ABC transporter ATP-binding protein 774888 phnC 2692335 phnC Rhodopseudomonas palustris CGA009 phosphonate ABC transporter ATP-binding protein NP_946053.1 774076 R 258594 CDS NP_946054.1 39933778 2692231 775029..775748 1 NC_005296.1 acetyltransferase 775748 2692231 RPA0701 Rhodopseudomonas palustris CGA009 acetyltransferase NP_946054.1 775029 D 258594 CDS NP_946055.1 39933779 2692314 775745..776938 1 NC_005296.1 E. coli PhnM, HisM-like integral membrane protein; phosphonate ABC transporter permease 776938 phnM2 2692314 phnM2 Rhodopseudomonas palustris CGA009 phosphonate ABC transporter permease NP_946055.1 775745 D 258594 CDS NP_946056.1 39933780 2692240 776961..777665 1 NC_005296.1 hypothetical protein 777665 2692240 RPA0703 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946056.1 776961 D 258594 CDS NP_946057.1 39933781 2692331 complement(777662..778642) 1 NC_005296.1 hypothetical protein 778642 2692331 RPA0704 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946057.1 777662 R 258594 CDS NP_946058.1 39933782 2692219 778886..779080 1 NC_005296.1 hypothetical protein 779080 2692219 RPA0705 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946058.1 778886 D 258594 CDS NP_946059.1 39933783 2691332 779578..780054 1 NC_005296.1 endonuclease III 780054 2691332 RPA0706 Rhodopseudomonas palustris CGA009 endonuclease III NP_946059.1 779578 D 258594 CDS NP_946060.1 39933784 2692317 complement(780032..780355) 1 NC_005296.1 periplasmic divalent cation resistance protein CutA 780355 cutA 2692317 cutA Rhodopseudomonas palustris CGA009 periplasmic divalent cation resistance protein CutA NP_946060.1 780032 R 258594 CDS NP_946061.1 39933785 2692326 780767..781288 1 NC_005296.1 hypothetical protein 781288 2692326 RPA0708 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946061.1 780767 D 258594 CDS NP_946062.1 39933786 2692256 781403..781948 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 781948 2692256 RPA0709 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946062.1 781403 D 258594 CDS NP_946063.1 39933787 2692195 781991..782251 1 NC_005296.1 hypothetical protein 782251 2692195 RPA0710 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946063.1 781991 D 258594 CDS NP_946064.1 39933788 2692252 complement(782498..783169) 1 NC_005296.1 nitroreductase family protein 783169 2692252 RPA0711 Rhodopseudomonas palustris CGA009 nitroreductase family protein NP_946064.1 782498 R 258594 CDS NP_946065.1 39933789 2692254 complement(783196..784251) 1 NC_005296.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 784251 cobT 2692254 cobT Rhodopseudomonas palustris CGA009 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase NP_946065.1 783196 R 258594 CDS NP_946066.1 39933790 2692036 784566..785087 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 785087 2692036 RPA0713 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946066.1 784566 D 258594 CDS NP_946067.1 39933791 2692274 785084..785614 1 NC_005296.1 bifunctional cobinamide kinase cobinamide phosphate guanylyltransferase protein 785614 cobU 2692274 cobU Rhodopseudomonas palustris CGA009 bifunctional cobinamide kinase cobinamide phosphate guanylyltransferase protein NP_946067.1 785084 D 258594 CDS NP_946068.1 39933792 2692237 785618..786622 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cobalamin synthesis protein cobW 786622 cobW 2692237 cobW Rhodopseudomonas palustris CGA009 cobalamin synthesis protein cobW NP_946068.1 785618 D 258594 CDS NP_946069.1 39933793 2692059 786757..790506 1 NC_005296.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 790506 cobN 2692059 cobN Rhodopseudomonas palustris CGA009 cobaltochelatase subunit CobN NP_946069.1 786757 D 258594 CDS NP_946070.1 39933794 2692258 790503..791129 1 NC_005296.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 791129 cobO 2692258 cobO Rhodopseudomonas palustris CGA009 cob(I)yrinic acid a,c-diamide adenosyltransferase NP_946070.1 790503 D 258594 CDS NP_946071.1 39933795 2692010 791277..792761 1 NC_005296.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 792761 cobQ1 2692010 cobQ1 Rhodopseudomonas palustris CGA009 cobyric acid synthase NP_946071.1 791277 D 258594 CDS NP_946072.1 39933796 2692155 complement(792734..793705) 1 NC_005296.1 cobalamin biosynthesis protein CobD 793705 cobD 2692155 cobD Rhodopseudomonas palustris CGA009 cobalamin biosynthesis protein CobD NP_946072.1 792734 R 258594 CDS NP_946073.1 39933797 2692192 complement(793707..794519) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cobalamin/Fe3+-siderophores ABC transporter periplasmic protein 794519 2692192 RPA0720 Rhodopseudomonas palustris CGA009 cobalamin/Fe3+-siderophores ABC transporter periplasmic protein NP_946073.1 793707 R 258594 CDS NP_946074.1 39933798 2692209 794583..795572 1 NC_005296.1 cobalamin biosynthetic protein CobC 795572 cobC 2692209 cobC Rhodopseudomonas palustris CGA009 cobalamin biosynthetic protein CobC NP_946074.1 794583 D 258594 CDS NP_946075.1 39933799 2691997 complement(795584..796363) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; iron(III) dicitrate ABC transporter ATP-binding protein FecE 796363 fecE 2691997 fecE Rhodopseudomonas palustris CGA009 iron(III) dicitrate ABC transporter ATP-binding protein FecE NP_946075.1 795584 R 258594 CDS NP_946076.1 39933800 2692161 complement(796360..797385) 1 NC_005296.1 hemin ABC transporter permease 797385 2692161 RPA0723 Rhodopseudomonas palustris CGA009 hemin ABC transporter permease NP_946076.1 796360 R 258594 CDS NP_946077.1 39933801 2692228 complement(797393..798451) 1 NC_005296.1 high-affinity nickel-transport protein 798451 nxiA 2692228 nxiA Rhodopseudomonas palustris CGA009 high-affinity nickel-transport protein NP_946077.1 797393 R 258594 CDS NP_946078.1 39933802 2692092 complement(798784..799107) 1 NC_005296.1 E. coli sugE is a multicopy suppressor of groEL mutations. This gene cannot encode the long form of the protein (sugEL).; chaperone 799107 sugE 2692092 sugE Rhodopseudomonas palustris CGA009 chaperone NP_946078.1 798784 R 258594 CDS NP_946079.1 39933803 2692178 complement(799104..799841) 1 NC_005296.1 S-adenosylmethionine:diacylgycerolhomoserine-N- methyltransferase BtaB 799841 btaB 2692178 btaB Rhodopseudomonas palustris CGA009 S-adenosylmethionine:diacylgycerolhomoserine-N- methyltransferase BtaB NP_946079.1 799104 R 258594 CDS NP_946080.1 39933804 2692144 799994..801217 1 NC_005296.1 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyltransferase 801217 2692144 RPA0727 Rhodopseudomonas palustris CGA009 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyltransferase NP_946080.1 799994 D 258594 CDS NP_946081.1 39933805 2692058 801773..803179 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 803179 2692058 RPA0728 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946081.1 801773 D 258594 CDS NP_946082.1 39933806 2692099 803190..803768 1 NC_005296.1 hypothetical protein 803768 2692099 RPA0729 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946082.1 803190 D 258594 CDS NP_946083.1 39933807 2692090 803781..804470 1 NC_005296.1 hypothetical protein 804470 2692090 RPA0730 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946083.1 803781 D 258594 CDS NP_946084.1 39933808 2692116 805004..805897 1 NC_005296.1 LysR family transcriptional regulator 805897 2692116 RPA0731 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_946084.1 805004 D 258594 CDS NP_946085.1 39933809 2692088 806161..806631 1 NC_005296.1 catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma 806631 fdsG 2692088 fdsG Rhodopseudomonas palustris CGA009 formate dehydrogenase subunit gamma NP_946085.1 806161 D 258594 CDS NP_946086.1 39933810 2692080 806628..808184 1 NC_005296.1 NADH dehydrogenase (quinone) 808184 fdsB 2692080 fdsB Rhodopseudomonas palustris CGA009 NADH dehydrogenase (quinone) NP_946086.1 806628 D 258594 CDS NP_946087.1 39933811 2692108 808197..811043 1 NC_005296.1 formate dehydrogenase subunit alpha 811043 fdsA 2692108 fdsA Rhodopseudomonas palustris CGA009 formate dehydrogenase subunit alpha NP_946087.1 808197 D 258594 CDS NP_946088.1 39933812 2692135 811043..811873 1 NC_005296.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 811873 fdsC 2692135 fdsC Rhodopseudomonas palustris CGA009 formate dehydrogenase accessory protein NP_946088.1 811043 D 258594 CDS NP_946089.1 39933813 2692038 811863..812078 1 NC_005296.1 NAD-dependent formate dehydrogenase subunit delta 812078 fdsD 2692038 fdsD Rhodopseudomonas palustris CGA009 NAD-dependent formate dehydrogenase subunit delta NP_946089.1 811863 D 258594 CDS NP_946090.1 39933814 2692117 812088..813791 1 NC_005296.1 MFS superfamily oxalate/formate antiporter 813791 2692117 RPA0737 Rhodopseudomonas palustris CGA009 MFS superfamily oxalate/formate antiporter NP_946090.1 812088 D 258594 CDS NP_946091.1 39933815 2692009 813898..815307 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; L-sorbosone dehydrogenase 815307 2692009 RPA0738 Rhodopseudomonas palustris CGA009 L-sorbosone dehydrogenase NP_946091.1 813898 D 258594 CDS NP_946092.1 39933816 2692077 815452..816042 1 NC_005296.1 cytochrome c 816042 cyc 2692077 cyc Rhodopseudomonas palustris CGA009 cytochrome c NP_946092.1 815452 D 258594 CDS NP_946093.1 39933817 2692082 816117..817226 1 NC_005296.1 acyl-CoA dehydrogenase 817226 2692082 RPA0740 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_946093.1 816117 D 258594 CDS NP_946094.1 39933818 2688909 817223..818170 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 818170 2688909 RPA0741 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946094.1 817223 D 258594 CDS NP_946095.1 39933819 2692086 818170..819561 1 NC_005296.1 hypothetical protein 819561 2692086 RPA0742 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946095.1 818170 D 258594 CDS NP_946096.1 39933820 2692039 819739..821265 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acid-CoA ligase 821265 2692039 RPA0743 Rhodopseudomonas palustris CGA009 acid-CoA ligase NP_946096.1 819739 D 258594 CDS NP_946097.1 39933821 2692013 complement(821440..821724) 1 NC_005296.1 high potential iron sulfur protein 821724 2692013 RPA0744 Rhodopseudomonas palustris CGA009 high potential iron sulfur protein NP_946097.1 821440 R 258594 CDS NP_946098.1 39933822 2692056 complement(821865..824297) 1 NC_005296.1 outer membrane protein 824297 2692056 RPA0745 Rhodopseudomonas palustris CGA009 outer membrane protein NP_946098.1 821865 R 258594 CDS NP_946099.1 39933823 2691772 complement(824397..826001) 1 NC_005296.1 Shewanella putrefaciens homolog is involved in metal reduction. Homology is only in C-terminal 60% of predicted protein.; deca-heme c-type cytochrome 826001 2691772 RPA0746 Rhodopseudomonas palustris CGA009 deca-heme c-type cytochrome NP_946099.1 824397 R 258594 CDS NP_946100.1 39933824 2692045 complement(826776..827822) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sulfate transport system permease 1 827822 cysA 2692045 cysA Rhodopseudomonas palustris CGA009 sulfate transport system permease 1 NP_946100.1 826776 R 258594 CDS NP_946101.1 39933825 2692017 complement(827812..828726) 1 NC_005296.1 sulfate ABC transporter permease 828726 cysW 2692017 cysW Rhodopseudomonas palustris CGA009 sulfate ABC transporter permease NP_946101.1 827812 R 258594 CDS NP_946102.1 39933826 2691930 complement(828731..829567) 1 NC_005296.1 sulfate ABC transporter permease 829567 cysT 2691930 cysT Rhodopseudomonas palustris CGA009 sulfate ABC transporter permease NP_946102.1 828731 R 258594 CDS NP_946103.1 39933827 2692048 complement(829860..830849) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; thiosulfate-binding protein 830849 sbp 2692048 sbp Rhodopseudomonas palustris CGA009 thiosulfate-binding protein NP_946103.1 829860 R 258594 CDS NP_946104.1 39933828 2691907 complement(830974..831714) 1 NC_005296.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 831714 cysH 2691907 cysH Rhodopseudomonas palustris CGA009 phosphoadenosine phosphosulfate reductase NP_946104.1 830974 R 258594 CDS NP_946105.1 39933829 2688892 832014..832883 1 NC_005296.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 832883 cysD 2688892 cysD Rhodopseudomonas palustris CGA009 sulfate adenylyltransferase subunit 2 NP_946105.1 832014 D 258594 CDS NP_946106.1 39933830 2691835 832905..834815 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; bifunctional ATP-sulfurylase large subunit/adenylyl sulfate kinase CysN/CysC 834815 cysN 2691835 cysN Rhodopseudomonas palustris CGA009 bifunctional ATP-sulfurylase large subunit/adenylyl sulfate kinase CysN/CysC NP_946106.1 832905 D 258594 CDS NP_946107.1 39933831 2691970 complement(834822..836258) 1 NC_005296.1 signal transduction histidine kinase 836258 2691970 RPA0754 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_946107.1 834822 R 258594 CDS NP_946108.1 39933832 2691721 complement(836321..837298) 1 NC_005296.1 oligopeptide ABC transporter ATP-binding protein 837298 2691721 RPA0755 Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter ATP-binding protein NP_946108.1 836321 R 258594 CDS NP_946109.1 39933833 2691980 complement(837299..838711) 1 NC_005296.1 amidase 838711 2691980 RPA0756 Rhodopseudomonas palustris CGA009 amidase NP_946109.1 837299 R 258594 CDS NP_946110.1 39933834 2691934 complement(838708..838902) 1 NC_005296.1 hypothetical protein 838902 2691934 RPA0757 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946110.1 838708 R 258594 CDS NP_946111.1 39933835 2691933 complement(838916..839974) 1 NC_005296.1 oligopeptide ABC transporter ATP-binding protein 839974 2691933 RPA0758 Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter ATP-binding protein NP_946111.1 838916 R 258594 CDS NP_946112.1 39933836 2691957 complement(839979..840884) 1 NC_005296.1 oligopeptide ABC transporter permease 840884 2691957 RPA0759 Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter permease NP_946112.1 839979 R 258594 CDS NP_946113.1 39933837 2691984 complement(840889..841842) 1 NC_005296.1 oligopeptide ABC transporter permease 841842 2691984 RPA0760 Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter permease NP_946113.1 840889 R 258594 CDS NP_946114.1 39933838 2691826 complement(842040..843701) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; oligopeptide ABC transporter periplasmic binding protein component 843701 2691826 RPA0761 Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter periplasmic binding protein component NP_946114.1 842040 R 258594 CDS NP_946115.1 39933839 2691867 843889..845487 1 NC_005296.1 oligopeptide ABC transporter periplasmic binding protein component 845487 2691867 RPA0762 Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter periplasmic binding protein component NP_946115.1 843889 D 258594 CDS NP_946116.1 39933840 2691919 845640..846434 1 NC_005296.1 methyltransferase 846434 2691919 RPA0763 Rhodopseudomonas palustris CGA009 methyltransferase NP_946116.1 845640 D 258594 CDS NP_946117.1 39933841 2691953 complement(846490..846924) 1 NC_005296.1 hypothetical protein 846924 2691953 RPA0764 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946117.1 846490 R 258594 CDS NP_946118.1 39933842 2691858 complement(846945..849308) 1 NC_005296.1 outer membrane receptor for iron transport 849308 2691858 RPA0765 Rhodopseudomonas palustris CGA009 outer membrane receptor for iron transport NP_946118.1 846945 R 258594 CDS NP_946119.1 39933843 2691902 849702..850409 1 NC_005296.1 Crp/Fnr family transcriptional regulator 850409 2691902 RPA0766 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_946119.1 849702 D 258594 CDS NP_946120.1 39933844 2691894 850515..851456 1 NC_005296.1 diguanylate cyclase 851456 2691894 RPA0767 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_946120.1 850515 D 258594 CDS NP_946121.1 39933845 2689147 851947..852750 1 NC_005296.1 transposase 852750 2689147 RPA0768 Rhodopseudomonas palustris CGA009 transposase NP_946121.1 851947 D 258594 CDS NP_946122.1 39933846 2691873 853002..853823 1 NC_005296.1 hypothetical protein 853823 2691873 RPA0769 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946122.1 853002 D 258594 CDS NP_946123.1 39933847 2691256 complement(853839..854762) 1 NC_005296.1 integrase catalytic subunit 854762 2691256 RPA0770 Rhodopseudomonas palustris CGA009 integrase catalytic subunit NP_946123.1 853839 R 258594 CDS NP_946124.1 39933848 2691783 complement(854756..855022) 1 NC_005296.1 hypothetical protein 855022 2691783 RPA0771 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946124.1 854756 R 258594 CDS NP_946125.1 39933849 2691886 855099..856412 1 NC_005296.1 pentapeptide repeat-containing protein 856412 2691886 RPA0772 Rhodopseudomonas palustris CGA009 pentapeptide repeat-containing protein NP_946125.1 855099 D 258594 CDS NP_946126.1 39933850 2691865 complement(856721..857179) 1 NC_005296.1 hypothetical protein 857179 2691865 RPA0773 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946126.1 856721 R 258594 CDS NP_946127.1 39933851 2691829 857784..858209 1 NC_005296.1 hypothetical protein 858209 2691829 RPA0774 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946127.1 857784 D 258594 CDS NP_946128.1 39933852 2691819 858557..859069 1 NC_005296.1 hypothetical protein 859069 2691819 RPA0775 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946128.1 858557 D 258594 CDS NP_946129.1 39933853 2691817 complement(859102..860694) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; gamma-glutamyltranspeptidase 860694 2691817 RPA0776 Rhodopseudomonas palustris CGA009 gamma-glutamyltranspeptidase NP_946129.1 859102 R 258594 CDS NP_946130.1 39933854 2691838 complement(860813..863527) 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 863527 2691838 RPA0777 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_946130.1 860813 R 258594 CDS NP_946131.1 39933855 2691823 complement(863776..864177) 1 NC_005296.1 hypothetical protein 864177 2691823 RPA0778 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946131.1 863776 R 258594 CDS NP_946132.1 39933856 2691790 864609..864803 1 NC_005296.1 hypothetical protein 864803 2691790 RPA0779 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946132.1 864609 D 258594 CDS NP_946133.1 39933857 2691802 complement(864804..866069) 1 NC_005296.1 acyl-CoA dehydrogenase 866069 2691802 RPA0780 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_946133.1 864804 R 258594 CDS NP_946134.1 39933858 2691688 complement(866150..866500) 1 NC_005296.1 cytochrome c552 866500 2691688 RPA0781 Rhodopseudomonas palustris CGA009 cytochrome c552 NP_946134.1 866150 R 258594 CDS NP_946135.1 39933859 2691400 complement(866503..866937) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 866937 2691400 RPA0782 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946135.1 866503 R 258594 CDS NP_946136.1 39933860 2691794 complement(867126..868943) 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 868943 2691794 RPA0783 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_946136.1 867126 R 258594 CDS NP_946137.1 39933861 2691737 869122..869964 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 869964 2691737 RPA0784 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_946137.1 869122 D 258594 CDS NP_946138.1 39933862 2691769 complement(870091..871470) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome P450 871470 2691769 RPA0785 Rhodopseudomonas palustris CGA009 cytochrome P450 NP_946138.1 870091 R 258594 CDS NP_946139.1 39933863 2691761 complement(871591..872985) 1 NC_005296.1 adenylate/guanylate cyclase 872985 2691761 RPA0786 Rhodopseudomonas palustris CGA009 adenylate/guanylate cyclase NP_946139.1 871591 R 258594 CDS NP_946140.1 39933864 2691759 873042..874016 1 NC_005296.1 metalloprotease; heat shock protein HtpX 874016 2691759 RPA0787 Rhodopseudomonas palustris CGA009 heat shock protein HtpX NP_946140.1 873042 D 258594 CDS NP_946141.1 39933865 2691766 874269..875684 1 NC_005296.1 major facilitator superfamily drug efflux transporter 875684 2691766 RPA0788 Rhodopseudomonas palustris CGA009 major facilitator superfamily drug efflux transporter NP_946141.1 874269 D 258594 CDS NP_946142.1 39933866 2691720 complement(875681..876868) 1 NC_005296.1 serine-glyoxylate aminotransferase 876868 2691720 RPA0789 Rhodopseudomonas palustris CGA009 serine-glyoxylate aminotransferase NP_946142.1 875681 R 258594 CDS NP_946143.1 39933867 2691715 complement(876924..877778) 1 NC_005296.1 hypothetical protein 877778 2691715 RPA0790 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946143.1 876924 R 258594 CDS NP_946144.1 39933868 2691693 complement(877812..878633) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nuclease 878633 exoI1 2691693 exoI1 Rhodopseudomonas palustris CGA009 nuclease NP_946144.1 877812 R 258594 CDS NP_946145.1 39933869 2691742 complement(878657..880396) 1 NC_005296.1 hypothetical protein 880396 2691742 RPA0792 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946145.1 878657 R 258594 CDS NP_946146.1 39933870 2691244 880850..881716 1 NC_005296.1 peptidase C14 caspase catalytic subunit p20 881716 2691244 RPA0793 Rhodopseudomonas palustris CGA009 peptidase C14 caspase catalytic subunit p20 NP_946146.1 880850 D 258594 CDS NP_946147.1 39933871 2691746 complement(881807..882565) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbonate dehydratase 882565 acaP 2691746 acaP Rhodopseudomonas palustris CGA009 carbonate dehydratase NP_946147.1 881807 R 258594 CDS NP_946148.1 39933872 2691732 complement(882652..883284) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; S24 family peptidase 883284 2691732 RPA0795 Rhodopseudomonas palustris CGA009 S24 family peptidase NP_946148.1 882652 R 258594 CDS NP_946149.1 39933873 2691729 883368..883958 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 883958 2691729 RPA0796 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946149.1 883368 D 258594 CDS NP_946150.1 39933874 2691261 883955..885049 1 NC_005296.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 885049 uraI 2691261 uraI Rhodopseudomonas palustris CGA009 dihydroorotate dehydrogenase 2 NP_946150.1 883955 D 258594 CDS NP_946151.1 39933875 2691050 complement(885190..885924) 1 NC_005296.1 beta-lactamase-like protein 885924 2691050 RPA0798 Rhodopseudomonas palustris CGA009 beta-lactamase-like protein NP_946151.1 885190 R 258594 CDS NP_946152.1 39933876 2691705 complement(886068..886733) 1 NC_005296.1 carbonic anhydrase 886733 2691705 RPA0799 Rhodopseudomonas palustris CGA009 carbonic anhydrase NP_946152.1 886068 R 258594 CDS NP_946153.1 39933877 2691237 complement(886913..888235) 1 NC_005296.1 MATE efflux family protein 888235 matE1 2691237 matE1 Rhodopseudomonas palustris CGA009 MATE efflux family protein NP_946153.1 886913 R 258594 CDS NP_946154.1 39933878 2691008 complement(888254..888589) 1 NC_005296.1 hypothetical protein 888589 2691008 RPA0801 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946154.1 888254 R 258594 CDS NP_946155.1 39933879 2691257 complement(888628..890493) 1 NC_005296.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 890493 2691257 RPA0802 Rhodopseudomonas palustris CGA009 ATP-dependent DNA ligase NP_946155.1 888628 R 258594 CDS NP_946156.1 39933880 2691212 complement(890490..891536) 1 NC_005296.1 mRNA 3-end processing factor 891536 2691212 RPA0803 Rhodopseudomonas palustris CGA009 mRNA 3-end processing factor NP_946156.1 890490 R 258594 CDS NP_946157.1 39933881 2691246 891595..892530 1 NC_005296.1 hypothetical protein 892530 2691246 RPA0804 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946157.1 891595 D 258594 CDS NP_946158.1 39933882 2691328 complement(892683..894032) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane protein 894032 2691328 RPA0805 Rhodopseudomonas palustris CGA009 outer membrane protein NP_946158.1 892683 R 258594 CDS NP_946159.1 39933883 2691186 894376..895596 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; high-affinity branched-chain amino acid transport system substrate-binding protein 895596 2691186 RPA0806 Rhodopseudomonas palustris CGA009 high-affinity branched-chain amino acid transport system substrate-binding protein NP_946159.1 894376 D 258594 CDS NP_946160.1 39933884 2690662 895772..898489 1 NC_005296.1 ATP dependent DNA helicase 898489 2690662 RPA0807 Rhodopseudomonas palustris CGA009 ATP dependent DNA helicase NP_946160.1 895772 D 258594 CDS NP_946161.1 39933885 2691082 898734..899276 1 NC_005296.1 hypothetical protein 899276 2691082 RPA0808 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946161.1 898734 D 258594 CDS NP_946162.1 39933886 2691194 complement(899416..900279) 1 NC_005296.1 LysR family transcriptional regulator 900279 2691194 RPA0809 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_946162.1 899416 R 258594 CDS NP_946163.1 39933887 2691226 900378..901298 1 NC_005296.1 DMT family permease 901298 2691226 RPA0810 Rhodopseudomonas palustris CGA009 DMT family permease NP_946163.1 900378 D 258594 CDS NP_946164.1 39933888 2691110 901384..902730 1 NC_005296.1 manganese transp 902730 2691110 RPA0811 Rhodopseudomonas palustris CGA009 manganese transp NP_946164.1 901384 D 258594 CDS NP_946165.1 39933889 2691228 complement(902897..903697) 1 NC_005296.1 hypothetical protein 903697 2691228 RPA0812 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946165.1 902897 R 258594 CDS NP_946166.1 39933890 2691216 complement(903694..904656) 1 NC_005296.1 hypothetical protein 904656 2691216 RPA0813 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946166.1 903694 R 258594 CDS NP_946167.1 39933891 2691175 complement(904892..908287) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 908287 2691175 RPA0814 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946167.1 904892 R 258594 CDS NP_946168.1 39933892 2691103 909116..909763 1 NC_005296.1 hypothetical protein 909763 2691103 RPA0815 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946168.1 909116 D 258594 CDS NP_946169.1 39933893 2691157 909857..911647 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 911647 2691157 RPA0816 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_946169.1 909857 D 258594 CDS NP_946170.1 39933894 2691089 911818..913026 1 NC_005296.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 913026 2691089 RPA0817 Rhodopseudomonas palustris CGA009 acetyl-CoA acetyltransferase NP_946170.1 911818 D 258594 CDS NP_946171.1 39933895 2691160 913151..915367 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-hydroxyacyl-CoA dehydrogenase 915367 2691160 RPA0818 Rhodopseudomonas palustris CGA009 3-hydroxyacyl-CoA dehydrogenase NP_946171.1 913151 D 258594 CDS NP_946172.1 39933896 2691197 915791..917596 1 NC_005296.1 hypothetical protein 917596 2691197 RPA0819 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946172.1 915791 D 258594 CDS NP_946173.1 39933897 2691096 complement(917708..918319) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutathionine S-transferase 918319 gst2 2691096 gst2 Rhodopseudomonas palustris CGA009 glutathionine S-transferase NP_946173.1 917708 R 258594 CDS NP_946174.1 39933898 2691128 918366..918932 1 NC_005296.1 MarR family transcriptional regulator 918932 2691128 RPA0821 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_946174.1 918366 D 258594 CDS NP_946175.1 39933899 2691350 918960..920396 1 NC_005296.1 glutamate--cysteine ligase 920396 gshA 2691350 gshA Rhodopseudomonas palustris CGA009 glutamate--cysteine ligase NP_946175.1 918960 D 258594 CDS NP_946176.1 39933900 2691168 920542..921093 1 NC_005296.1 hypothetical protein 921093 2691168 RPA0823 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946176.1 920542 D 258594 CDS NP_946177.1 39933901 2691091 complement(921127..921897) 1 NC_005296.1 signal peptidase I 921897 lepB1 2691091 lepB1 Rhodopseudomonas palustris CGA009 signal peptidase I NP_946177.1 921127 R 258594 CDS NP_946178.1 39933902 2691085 complement(921894..923321) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase U62 923321 2691085 RPA0825 Rhodopseudomonas palustris CGA009 peptidase U62 NP_946178.1 921894 R 258594 CDS NP_946179.1 39933903 2690977 923443..923664 1 NC_005296.1 hypothetical protein 923664 2690977 RPA0826 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946179.1 923443 D 258594 CDS NP_946180.1 39933904 2691148 923664..923993 1 NC_005296.1 hypothetical protein 923993 2691148 RPA0827 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946180.1 923664 D 258594 CDS NP_946181.1 39933905 2690765 924075..924545 1 NC_005296.1 MarR family transcriptional regulator 924545 2690765 RPA0828 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_946181.1 924075 D 258594 CDS NP_946182.1 39933906 2691142 924660..925085 1 NC_005296.1 organic hydroperoxide resistance protein 925085 ohr 2691142 ohr Rhodopseudomonas palustris CGA009 organic hydroperoxide resistance protein NP_946182.1 924660 D 258594 CDS NP_946183.1 39933907 2691013 complement(925367..926035) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 926035 2691013 RPA0830 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946183.1 925367 R 258594 CDS NP_946184.1 39933908 2691059 926324..927181 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome-c oxidase 927181 coxB 2691059 coxB Rhodopseudomonas palustris CGA009 cytochrome-c oxidase NP_946184.1 926324 D 258594 CDS NP_946185.1 39933909 2691067 927249..928874 1 NC_005296.1 cytochrome-c oxidase 928874 coxA 2691067 coxA Rhodopseudomonas palustris CGA009 cytochrome-c oxidase NP_946185.1 927249 D 258594 CDS NP_946186.1 39933910 2690887 928920..929885 1 NC_005296.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 929885 coxE 2690887 coxE Rhodopseudomonas palustris CGA009 protoheme IX farnesyltransferase NP_946186.1 928920 D 258594 CDS NP_946187.1 39933911 2691104 929885..930064 1 NC_005296.1 CoxF protein 930064 CoxF 2691104 CoxF Rhodopseudomonas palustris CGA009 CoxF protein NP_946187.1 929885 D 258594 CDS NP_946188.1 39933912 2691032 930061..930705 1 NC_005296.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 930705 coxG 2691032 coxG Rhodopseudomonas palustris CGA009 cytochrome C oxidase assembly protein NP_946188.1 930061 D 258594 CDS NP_946189.1 39933913 2691019 930777..931631 1 NC_005296.1 cytochrome c oxidase subunit III 931631 coxC 2691019 coxC Rhodopseudomonas palustris CGA009 cytochrome c oxidase subunit III NP_946189.1 930777 D 258594 CDS NP_946190.1 39933914 2690994 931794..932189 1 NC_005296.1 hypothetical protein 932189 2690994 RPA0837 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946190.1 931794 D 258594 CDS NP_946191.1 39933915 2690807 932186..932989 1 NC_005296.1 surfeit 1 932989 2690807 RPA0838 Rhodopseudomonas palustris CGA009 surfeit 1 NP_946191.1 932186 D 258594 CDS NP_946192.2 161610777 2690972 933124..934554 1 NC_005296.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 934554 thrC 2690972 thrC Rhodopseudomonas palustris CGA009 threonine synthase NP_946192.2 933124 D 258594 CDS NP_946193.1 39933917 2691043 934551..935840 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; protease 935840 mpp 2691043 mpp Rhodopseudomonas palustris CGA009 protease NP_946193.1 934551 D 258594 CDS NP_946194.1 39933918 2691046 935893..936489 1 NC_005296.1 N-acetyltransferase GCN5 936489 2691046 RPA0841 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_946194.1 935893 D 258594 CDS NP_946195.1 39933919 2690975 936587..937240 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 937240 2690975 RPA0842 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946195.1 936587 D 258594 CDS NP_946196.1 39933920 2690885 complement(937373..937864) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; H+-transporting two-sector ATPase subunit B/B' 937864 atpF1 2690885 atpF1 Rhodopseudomonas palustris CGA009 H+-transporting two-sector ATPase subunit B/B' NP_946196.1 937373 R 258594 CDS NP_946197.1 39933921 2690935 complement(937870..938427) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; H+-transporting two-sector ATPase subunit B/B' 938427 atpF2 2690935 atpF2 Rhodopseudomonas palustris CGA009 H+-transporting two-sector ATPase subunit B/B' NP_946197.1 937870 R 258594 CDS NP_946198.1 39933922 2691006 complement(938485..938712) 1 NC_005296.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 938712 atpE 2691006 atpE Rhodopseudomonas palustris CGA009 ATP synthase F0F1 subunit C NP_946198.1 938485 R 258594 CDS NP_946199.1 39933923 2691011 complement(938761..939507) 1 NC_005296.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 939507 atpB 2691011 atpB Rhodopseudomonas palustris CGA009 ATP synthase F0F1 subunit A NP_946199.1 938761 R 258594 CDS NP_946200.1 39933924 2690936 complement(939577..939963) 1 NC_005296.1 FoF1 ATP synthase subunit I 939963 atpI 2690936 atpI Rhodopseudomonas palustris CGA009 FoF1 ATP synthase subunit I NP_946200.1 939577 R 258594 CDS NP_946201.1 39933925 2690929 940266..940889 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DSBA oxidoreductase 940889 2690929 RPA0848 Rhodopseudomonas palustris CGA009 DSBA oxidoreductase NP_946201.1 940266 D 258594 CDS NP_946202.1 39933926 2690961 940935..941519 1 NC_005296.1 hypothetical protein 941519 2690961 RPA0849 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946202.1 940935 D 258594 CDS NP_946203.1 39933927 2690877 941543..942016 1 NC_005296.1 hypothetical protein 942016 2690877 RPA0850 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946203.1 941543 D 258594 CDS NP_946204.1 39933928 2690968 complement(942213..943877) 1 NC_005296.1 general substrate transporter 943877 2690968 RPA0851 Rhodopseudomonas palustris CGA009 general substrate transporter NP_946204.1 942213 R 258594 CDS NP_946205.1 39933929 2690839 944214..944891 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; LuxR family transcriptional regulator 944891 2690839 RPA0852 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_946205.1 944214 D 258594 CDS NP_946206.1 39933930 2690898 complement(945053..948562) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; periplasmic sensor hybrid histidine kinase 948562 2690898 RPA0853 Rhodopseudomonas palustris CGA009 periplasmic sensor hybrid histidine kinase NP_946206.1 945053 R 258594 CDS NP_946207.1 39933931 2690927 complement(948749..949978) 1 NC_005296.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 949978 hemO 2690927 hemO Rhodopseudomonas palustris CGA009 5-aminolevulinate synthase NP_946207.1 948749 R 258594 CDS NP_946208.1 39933932 2690911 complement(950199..951263) 1 NC_005296.1 beta-lactamase-like protein 951263 2690911 RPA0855 Rhodopseudomonas palustris CGA009 beta-lactamase-like protein NP_946208.1 950199 R 258594 CDS NP_946209.1 39933933 2689367 complement(951429..953567) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 953567 2689367 RPA0856 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_946209.1 951429 R 258594 CDS NP_946210.1 39933934 2690829 complement(953782..954516) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane protein 954516 2690829 RPA0857 Rhodopseudomonas palustris CGA009 outer membrane protein NP_946210.1 953782 R 258594 CDS NP_946211.1 39933935 2690924 955056..955805 1 NC_005296.1 ABC transporter ATP-binding protein 955805 2690924 RPA0858 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946211.1 955056 D 258594 CDS NP_946212.1 39933936 2690562 955810..956682 1 NC_005296.1 hypothetical protein 956682 2690562 RPA0859 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946212.1 955810 D 258594 CDS NP_946213.1 39933937 2691598 956688..957605 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter periplasmic binding protein 957605 2691598 RPA0860 Rhodopseudomonas palustris CGA009 ABC transporter periplasmic binding protein NP_946213.1 956688 D 258594 CDS NP_946214.1 39933938 2690901 957713..958801 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cobalamin synthesis protein P47K 958801 2690901 RPA0861 Rhodopseudomonas palustris CGA009 cobalamin synthesis protein P47K NP_946214.1 957713 D 258594 CDS NP_946215.1 39933939 2690910 958798..959817 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 959817 2690910 RPA0862 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946215.1 958798 D 258594 CDS NP_946216.1 39933940 2690859 959852..960574 1 NC_005296.1 Mg2+ transporter 960574 2690859 RPA0863 Rhodopseudomonas palustris CGA009 Mg2+ transporter NP_946216.1 959852 D 258594 CDS NP_946217.1 39933941 2691303 960635..961033 1 NC_005296.1 hypothetical protein 961033 2691303 RPA0864 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946217.1 960635 D 258594 CDS NP_946218.1 39933942 2690764 complement(961340..962770) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; homospermidine synthase 962770 2690764 RPA0865 Rhodopseudomonas palustris CGA009 homospermidine synthase NP_946218.1 961340 R 258594 CDS NP_946219.1 39933943 2688872 complement(962880..963284) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nucleoside diphosphate kinase regulator 963284 rnk 2688872 rnk Rhodopseudomonas palustris CGA009 nucleoside diphosphate kinase regulator NP_946219.1 962880 R 258594 CDS NP_946220.1 39933944 2690833 complement(963579..963965) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; endoribonuclease L-PSP 963965 2690833 RPA0867 Rhodopseudomonas palustris CGA009 endoribonuclease L-PSP NP_946220.1 963579 R 258594 CDS NP_946221.1 39933945 2688859 complement(964063..964221) 1 NC_005296.1 hypothetical protein 964221 2688859 RPA0868 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946221.1 964063 R 258594 CDS NP_946222.1 39933946 2690866 complement(964232..964819) 1 NC_005296.1 GCN5-like N-acetyltransferase 964819 2690866 RPA0869 Rhodopseudomonas palustris CGA009 GCN5-like N-acetyltransferase NP_946222.1 964232 R 258594 CDS NP_946223.1 39933947 2690650 complement(964962..966104) 1 NC_005296.1 ornithine decarboxylase 966104 2690650 RPA0870 Rhodopseudomonas palustris CGA009 ornithine decarboxylase NP_946223.1 964962 R 258594 CDS NP_946224.1 39933948 2690772 complement(966769..967029) 1 NC_005296.1 hypothetical protein 967029 2690772 RPA0871 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946224.1 966769 R 258594 CDS NP_946225.1 39933949 2689930 967238..969328 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidyl-dipeptidase Dcp 969328 2689930 RPA0872 Rhodopseudomonas palustris CGA009 peptidyl-dipeptidase Dcp NP_946225.1 967238 D 258594 CDS NP_946226.1 39933950 2689727 969333..969986 1 NC_005296.1 68% identity to Bradyrhizobium japonicum bll7755; hypothetical protein 969986 2689727 RPA0873 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946226.1 969333 D 258594 CDS NP_946227.1 39933951 2690717 969983..971296 1 NC_005296.1 high-affinity nickel-transporter 971296 2690717 RPA0874 Rhodopseudomonas palustris CGA009 high-affinity nickel-transporter NP_946227.1 969983 D 258594 CDS NP_946228.1 39933952 2690759 971472..972509 1 NC_005296.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 972509 hemH 2690759 hemH Rhodopseudomonas palustris CGA009 ferrochelatase NP_946228.1 971472 D 258594 CDS NP_946229.1 39933953 2690818 972666..973661 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 973661 2690818 RPA0876 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946229.1 972666 D 258594 CDS NP_946230.1 39933954 2690812 973678..974127 1 NC_005296.1 hypothetical protein 974127 2690812 RPA0877 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946230.1 973678 D 258594 CDS NP_946231.1 39933955 2690710 complement(974231..975136) 1 NC_005296.1 AraC family transcriptional regulator 975136 2690710 RPA0878 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_946231.1 974231 R 258594 CDS NP_946232.1 39933956 2690792 complement(975442..976455) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sugar isomerase 976455 kpsF 2690792 kpsF Rhodopseudomonas palustris CGA009 sugar isomerase NP_946232.1 975442 R 258594 CDS NP_946233.1 39933957 2690735 976660..978375 1 NC_005296.1 hypothetical protein 978375 2690735 RPA0880 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946233.1 976660 D 258594 CDS NP_946234.1 39933958 2690794 978487..979503 1 NC_005296.1 hypothetical protein 979503 2690794 RPA0881 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946234.1 978487 D 258594 CDS NP_946235.1 39933959 2690804 complement(979493..980344) 1 NC_005296.1 ABC transporter permease 980344 2690804 RPA0882 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_946235.1 979493 R 258594 CDS NP_946236.1 39933960 2689760 complement(980454..981248) 1 NC_005296.1 ABC transporter ATP-binding protein 981248 2689760 RPA0883 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946236.1 980454 R 258594 CDS NP_946237.1 39933961 2690776 complement(981450..982448) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter substrate-binding protein 982448 2690776 RPA0884 Rhodopseudomonas palustris CGA009 ABC transporter substrate-binding protein NP_946237.1 981450 R 258594 CDS NP_946238.1 39933962 2690584 complement(982576..982848) 1 NC_005296.1 hypothetical protein 982848 2690584 RPA0885 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946238.1 982576 R 258594 CDS NP_946239.1 39933963 2690724 983016..984524 1 NC_005296.1 diguanylate cyclase 984524 2690724 RPA0886 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_946239.1 983016 D 258594 CDS NP_946240.1 39933964 2690736 complement(984555..985430) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; UTP-glucose-1-phosphate uridylyltransferase 985430 exoN 2690736 exoN Rhodopseudomonas palustris CGA009 UTP-glucose-1-phosphate uridylyltransferase NP_946240.1 984555 R 258594 CDS NP_946241.1 39933965 2690766 complement(985554..986600) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alpha/beta hydrolase 986600 2690766 RPA0888 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase NP_946241.1 985554 R 258594 CDS NP_946242.1 39933966 2690700 986719..987195 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; heat shock protein Hsp20 987195 hspD 2690700 hspD Rhodopseudomonas palustris CGA009 heat shock protein Hsp20 NP_946242.1 986719 D 258594 CDS NP_946243.1 39933967 2690537 complement(987337..988113) 1 NC_005296.1 hypothetical protein 988113 2690537 RPA0890 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946243.1 987337 R 258594 CDS NP_946244.1 39933968 2690673 988573..993300 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutamate synthase ferredoxin subunit 993300 gltB 2690673 gltB Rhodopseudomonas palustris CGA009 glutamate synthase ferredoxin subunit NP_946244.1 988573 D 258594 CDS NP_946245.1 39933969 2690692 993473..994927 1 NC_005296.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 994927 gltD 2690692 gltD Rhodopseudomonas palustris CGA009 glutamate synthase subunit beta NP_946245.1 993473 D 258594 CDS NP_946246.1 39933970 2690544 995274..995675 1 NC_005296.1 hypothetical protein 995675 2690544 RPA0893 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946246.1 995274 D 258594 CDS NP_946247.1 39933971 2690548 complement(995769..996728) 1 NC_005296.1 transposase 996728 2690548 RPA0894 Rhodopseudomonas palustris CGA009 transposase NP_946247.1 995769 R 258594 CDS NP_946248.1 39933972 2690725 complement(997027..997803) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-oxoacyl-[ACP] reductase 997803 2690725 RPA0895 Rhodopseudomonas palustris CGA009 3-oxoacyl-[ACP] reductase NP_946248.1 997027 R 258594 CDS NP_946249.1 39933973 2690677 997944..998678 1 NC_005296.1 3-oxoacyl-ACP reductase 998678 2690677 RPA0896 Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP reductase NP_946249.1 997944 D 258594 CDS NP_946250.1 39933974 2688897 complement(998750..1000444) 1 NC_005296.1 hypothetical protein 1000444 2688897 RPA0897 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946250.1 998750 R 258594 CDS NP_946251.1 39933975 2690651 complement(1000591..1001508) 1 NC_005296.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1001508 dapA 2690651 dapA Rhodopseudomonas palustris CGA009 dihydrodipicolinate synthase NP_946251.1 1000591 R 258594 CDS NP_946252.1 39933976 2690447 complement(1002043..1003440) 1 NC_005296.1 lytic murein transglycosylase 1003440 2690447 RPA0899 Rhodopseudomonas palustris CGA009 lytic murein transglycosylase NP_946252.1 1002043 R 258594 CDS NP_946253.1 39933977 2690656 1003627..1004259 1 NC_005296.1 Rht family amino acid efflux protein 1004259 2690656 RPA0900 Rhodopseudomonas palustris CGA009 Rht family amino acid efflux protein NP_946253.1 1003627 D 258594 CDS NP_946254.1 39933978 2690657 complement(1004276..1005043) 1 NC_005296.1 hypothetical protein 1005043 2690657 RPA0901 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946254.1 1004276 R 258594 CDS NP_946255.1 39933979 2690674 complement(1005076..1005507) 1 NC_005296.1 glyoxalase/bleomycin resistance protein/dioxygenase 1005507 2690674 RPA0902 Rhodopseudomonas palustris CGA009 glyoxalase/bleomycin resistance protein/dioxygenase NP_946255.1 1005076 R 258594 CDS NP_946256.1 39933980 2690602 1005555..1006154 1 NC_005296.1 TetR family transcriptional regulator 1006154 2690602 RPA0903 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_946256.1 1005555 D 258594 CDS NP_946257.1 39933981 2690558 complement(1006170..1007090) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; histidinol-phosphate phosphatase 1007090 2690558 RPA0904 Rhodopseudomonas palustris CGA009 histidinol-phosphate phosphatase NP_946257.1 1006170 R 258594 CDS NP_946258.1 39933982 2689039 complement(1007654..1007827) 1 NC_005296.1 Flp/Fap pilin protein 1007827 2689039 RPA0905 Rhodopseudomonas palustris CGA009 Flp/Fap pilin protein NP_946258.1 1007654 R 258594 CDS NP_946259.1 39933983 2690616 complement(1007978..1008865) 1 NC_005296.1 N-formylglutamate amidohydrolase 1008865 2690616 RPA0906 Rhodopseudomonas palustris CGA009 N-formylglutamate amidohydrolase NP_946259.1 1007978 R 258594 CDS NP_946260.1 39933984 2688917 1009176..1009535 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis protein CheY 1009535 2688917 RPA0907 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_946260.1 1009176 D 258594 CDS NP_946261.1 39933985 2690613 1009925..1010050 1 NC_005296.1 hypothetical protein 1010050 2690613 RPA0908 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946261.1 1009925 D 258594 CDS NP_946262.1 39933986 2690618 complement(1010498..1011097) 1 NC_005296.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 1011097 wrbA 2690618 wrbA Rhodopseudomonas palustris CGA009 TrpR binding protein WrbA NP_946262.1 1010498 R 258594 CDS NP_946263.1 39933987 2690407 complement(1011260..1011958) 1 NC_005296.1 hypothetical protein 1011958 2690407 RPA0910 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946263.1 1011260 R 258594 CDS NP_946264.1 39933988 2690559 1012091..1013014 1 NC_005296.1 LysR family transcriptional regulator 1013014 2690559 RPA0911 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_946264.1 1012091 D 258594 CDS NP_946265.1 39933989 2690510 complement(1013029..1013862) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1013862 2690510 RPA0912 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946265.1 1013029 R 258594 CDS NP_946266.1 39933990 2690581 1013997..1014650 1 NC_005296.1 hypothetical protein 1014650 2690581 RPA0913 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946266.1 1013997 D 258594 CDS NP_946267.1 39933991 2690576 complement(1014871..1017750) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; diguanylate cyclase/phosphodiesterase 1017750 2690576 RPA0914 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_946267.1 1014871 R 258594 CDS NP_946268.1 39933992 2690610 complement(1017873..1018871) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NADPH quinone oxidoreductase 1018871 2690610 RPA0915 Rhodopseudomonas palustris CGA009 NADPH quinone oxidoreductase NP_946268.1 1017873 R 258594 CDS NP_946269.1 39933993 2690324 1018985..1019176 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1019176 2690324 RPA0916 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946269.1 1018985 D 258594 CDS NP_946270.1 39933994 2690519 1019597..1020106 1 NC_005296.1 AraC family transcriptional regulator 1020106 2690519 RPA0917 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_946270.1 1019597 D 258594 CDS NP_946271.1 39933995 2690374 complement(1020328..1020555) 1 NC_005296.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1020555 rpmE 2690374 rpmE Rhodopseudomonas palustris CGA009 50S ribosomal protein L31 NP_946271.1 1020328 R 258594 CDS NP_946272.1 39933996 2690511 1020753..1022657 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter permease/ATP-binding protein 1022657 2690511 RPA0919 Rhodopseudomonas palustris CGA009 ABC transporter permease/ATP-binding protein NP_946272.1 1020753 D 258594 CDS NP_946273.1 39933997 2690557 complement(1022801..1023247) 1 NC_005296.1 N-acetyltransferase GCN5 1023247 2690557 RPA0920 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_946273.1 1022801 R 258594 CDS NP_946274.1 39933998 2690486 complement(1023394..1024419) 1 NC_005296.1 hypothetical protein 1024419 2690486 RPA0921 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946274.1 1023394 R 258594 CDS NP_946275.1 39933999 2690463 complement(1024419..1025438) 1 NC_005296.1 hypothetical protein 1025438 2690463 RPA0922 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946275.1 1024419 R 258594 CDS NP_946276.1 39934000 2690505 1025618..1026445 1 NC_005296.1 hypothetical protein 1026445 2690505 RPA0923 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946276.1 1025618 D 258594 CDS NP_946277.1 39934001 2690522 1026442..1027467 1 NC_005296.1 cyclopropane-fatty-acyl-phospholipid synthase 1027467 2690522 RPA0924 Rhodopseudomonas palustris CGA009 cyclopropane-fatty-acyl-phospholipid synthase NP_946277.1 1026442 D 258594 CDS NP_946278.1 39934002 2690376 1027750..1027944 1 NC_005296.1 hypothetical protein 1027944 2690376 RPA0925 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946278.1 1027750 D 258594 CDS NP_946279.1 39934003 2690487 1028028..1028222 1 NC_005296.1 hypothetical protein 1028222 2690487 RPA0926 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946279.1 1028028 D 258594 CDS NP_946280.1 39934004 2690464 complement(1028320..1028529) 1 NC_005296.1 XRE family transcriptional regulator 1028529 2690464 RPA0927 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_946280.1 1028320 R 258594 CDS NP_946281.1 39934005 2690201 complement(1028533..1029108) 1 NC_005296.1 hypothetical protein 1029108 2690201 RPA0928 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946281.1 1028533 R 258594 CDS NP_946282.1 39934006 2690331 1029178..1029765 1 NC_005296.1 hypothetical protein 1029765 2690331 RPA0929 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946282.1 1029178 D 258594 CDS NP_946283.1 39934007 2690304 complement(1029992..1030594) 1 NC_005296.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1030594 2690304 RPA0930 Rhodopseudomonas palustris CGA009 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NP_946283.1 1029992 R 258594 CDS NP_946284.1 39934008 2690299 complement(1030591..1032129) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carboxylyase-like protein 1032129 ubiD 2690299 ubiD Rhodopseudomonas palustris CGA009 carboxylyase-like protein NP_946284.1 1030591 R 258594 CDS NP_946285.1 39934009 2690375 1032245..1032790 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1032790 2690375 RPA0932 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946285.1 1032245 D 258594 CDS NP_946286.1 39934010 2690131 1032794..1033771 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase U32 1033771 2690131 RPA0933 Rhodopseudomonas palustris CGA009 peptidase U32 NP_946286.1 1032794 D 258594 CDS NP_946287.1 39934011 2690461 1033840..1034760 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase U32 1034760 2690461 RPA0934 Rhodopseudomonas palustris CGA009 peptidase U32 NP_946287.1 1033840 D 258594 CDS NP_946288.1 39934012 2690451 complement(1035248..1036549) 1 NC_005296.1 hypothetical protein 1036549 2690451 RPA0935 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946288.1 1035248 R 258594 CDS NP_946289.1 39934013 2690333 1036631..1037203 1 NC_005296.1 TetR family transcriptional regulator 1037203 2690333 RPA0936 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_946289.1 1036631 D 258594 CDS NP_946290.1 39934014 2690449 complement(1037232..1038020) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; extragenic suppressor protein SuhB 1038020 2690449 RPA0937 Rhodopseudomonas palustris CGA009 extragenic suppressor protein SuhB NP_946290.1 1037232 R 258594 CDS NP_946291.1 39934015 2690262 complement(1038125..1039216) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1039216 2690262 RPA0938 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946291.1 1038125 R 258594 CDS NP_946292.1 39934016 2690427 complement(1039233..1039892) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; thiamine monophosphate synthase 1039892 2690427 RPA0939 Rhodopseudomonas palustris CGA009 thiamine monophosphate synthase NP_946292.1 1039233 R 258594 CDS NP_946293.1 39934017 2690378 complement(1039898..1040932) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; fructose-bisphosphate aldolase 1040932 2690378 RPA0940 Rhodopseudomonas palustris CGA009 fructose-bisphosphate aldolase NP_946293.1 1039898 R 258594 CDS NP_946294.1 39934018 2690352 complement(1040987..1041310) 1 NC_005296.1 hypothetical protein 1041310 2690352 RPA0941 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946294.1 1040987 R 258594 CDS NP_946295.1 39934019 2691530 complement(1041307..1041591) 1 NC_005296.1 hypothetical protein 1041591 2691530 RPA0942 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946295.1 1041307 R 258594 CDS NP_946296.1 39934020 2690381 complement(1041690..1042886) 1 NC_005296.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 1042886 pgk 2690381 pgk Rhodopseudomonas palustris CGA009 phosphoglycerate kinase NP_946296.1 1041690 R 258594 CDS NP_946297.1 39934021 2690269 complement(1043108..1044115) 1 NC_005296.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 1044115 cbbG 2690269 cbbG Rhodopseudomonas palustris CGA009 glyceraldehyde-3-phosphate dehydrogenase NP_946297.1 1043108 R 258594 CDS NP_946298.1 39934022 2689159 complement(1044331..1046316) 1 NC_005296.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1046316 cbbT2 2689159 cbbT2 Rhodopseudomonas palustris CGA009 transketolase NP_946298.1 1044331 R 258594 CDS NP_946299.1 39934023 2690373 1046611..1046988 1 NC_005296.1 hypothetical protein 1046988 2690373 RPA0946 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946299.1 1046611 D 258594 CDS NP_946300.1 39934024 2690279 1046985..1047395 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1047395 2690279 RPA0947 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946300.1 1046985 D 258594 CDS NP_946301.1 39934025 2689140 complement(1047902..1049140) 1 NC_005296.1 RNA methyltransferase 1049140 2689140 RPA0948 Rhodopseudomonas palustris CGA009 RNA methyltransferase NP_946301.1 1047902 R 258594 CDS NP_946302.1 39934026 2689139 complement(1049187..1050611) 1 NC_005296.1 MATE efflux family protein 1050611 matE2 2689139 matE2 Rhodopseudomonas palustris CGA009 MATE efflux family protein NP_946302.1 1049187 R 258594 CDS NP_946303.1 39934027 2690315 complement(1050674..1051414) 1 NC_005296.1 hemolysin A 1051414 tly 2690315 tly Rhodopseudomonas palustris CGA009 hemolysin A NP_946303.1 1050674 R 258594 CDS NP_946304.1 39934028 2688971 complement(1051417..1051980) 1 NC_005296.1 nucleoside 2-deoxyribosyltransferase 1051980 2688971 RPA0951 Rhodopseudomonas palustris CGA009 nucleoside 2-deoxyribosyltransferase NP_946304.1 1051417 R 258594 CDS NP_946305.1 39934029 2690243 complement(1052203..1054128) 1 NC_005296.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1054128 dxs 2690243 dxs Rhodopseudomonas palustris CGA009 1-deoxy-D-xylulose-5-phosphate synthase NP_946305.1 1052203 R 258594 CDS NP_946306.1 39934030 2690189 complement(1054542..1054793) 1 NC_005296.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1054793 xseB 2690189 xseB Rhodopseudomonas palustris CGA009 exodeoxyribonuclease VII small subunit NP_946306.1 1054542 R 258594 CDS NP_946307.1 39934031 2690317 complement(1054877..1055806) 1 NC_005296.1 histone deacetylase superfamily protein 1055806 2690317 RPA0954 Rhodopseudomonas palustris CGA009 histone deacetylase superfamily protein NP_946307.1 1054877 R 258594 CDS NP_946308.1 39934032 2690254 complement(1055912..1057630) 1 NC_005296.1 5`-nucleotidase family protein 1057630 2690254 RPA0955 Rhodopseudomonas palustris CGA009 5`-nucleotidase family protein NP_946308.1 1055912 R 258594 CDS NP_946309.1 39934033 2690281 1057814..1058290 1 NC_005296.1 hypothetical protein 1058290 2690281 RPA0956 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946309.1 1057814 D 258594 CDS NP_946310.1 39934034 2690151 complement(1058329..1059123) 1 NC_005296.1 enoyl-CoA hydratase 1059123 2690151 RPA0957 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_946310.1 1058329 R 258594 CDS NP_946311.1 39934035 2690292 complement(1059297..1061078) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 1061078 2690292 RPA0958 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_946311.1 1059297 R 258594 CDS NP_946312.1 39934036 2690258 1061498..1062499 1 NC_005296.1 uracil phosphoribosyltransferase 1062499 hupU 2690258 hupU Rhodopseudomonas palustris CGA009 uracil phosphoribosyltransferase NP_946312.1 1061498 D 258594 CDS NP_946313.1 39934037 2690234 1064173..1065285 1 NC_005296.1 hydrogenase small chain 1065285 hupS 2690234 hupS Rhodopseudomonas palustris CGA009 hydrogenase small chain NP_946313.1 1064173 D 258594 CDS NP_946314.1 39934038 2690202 1065304..1067097 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydrogenase large chain 1067097 hupL 2690202 hupL Rhodopseudomonas palustris CGA009 hydrogenase large chain NP_946314.1 1065304 D 258594 CDS NP_946315.1 39934039 2690244 1067114..1067842 1 NC_005296.1 Ni/Fe-hydrogenase 1 B-type cytochrome subunit 1067842 hupC 2690244 hupC Rhodopseudomonas palustris CGA009 Ni/Fe-hydrogenase 1 B-type cytochrome subunit NP_946315.1 1067114 D 258594 CDS NP_946316.1 39934040 2690251 1067904..1068557 1 NC_005296.1 hydrogenase maturation protein HupD 1068557 hupD 2690251 hupD Rhodopseudomonas palustris CGA009 hydrogenase maturation protein HupD NP_946316.1 1067904 D 258594 CDS NP_946317.1 39934041 2690054 1068571..1069164 1 NC_005296.1 membrane-bound hydrogenase component hupE 1069164 hupE 2690054 hupE Rhodopseudomonas palustris CGA009 membrane-bound hydrogenase component hupE NP_946317.1 1068571 D 258594 CDS NP_946318.1 39934042 2689828 1069185..1069487 1 NC_005296.1 hydrogenase expression/formation protein HupF 1069487 hupF 2689828 hupF Rhodopseudomonas palustris CGA009 hydrogenase expression/formation protein HupF NP_946318.1 1069185 D 258594 CDS NP_946319.1 39934043 2690158 1069708..1070109 1 NC_005296.1 hydrogenase expression/formation protein HupG 1070109 hupG 2690158 hupG Rhodopseudomonas palustris CGA009 hydrogenase expression/formation protein HupG NP_946319.1 1069708 D 258594 CDS NP_946320.1 39934044 2690135 1070106..1070972 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydrogenase expression/formation protein HupH 1070972 hupH 2690135 hupH Rhodopseudomonas palustris CGA009 hydrogenase expression/formation protein HupH NP_946320.1 1070106 D 258594 CDS NP_946321.1 39934045 2690198 1070969..1071181 1 NC_005296.1 rubredoxin hupI 1071181 hupI 2690198 hupI Rhodopseudomonas palustris CGA009 rubredoxin hupI NP_946321.1 1070969 D 258594 CDS NP_946322.1 39934046 2690130 1071171..1071695 1 NC_005296.1 hydrogenase expression/formation protein HupJ 1071695 hupJ 2690130 hupJ Rhodopseudomonas palustris CGA009 hydrogenase expression/formation protein HupJ NP_946322.1 1071171 D 258594 CDS NP_946323.1 39934047 2690129 1071692..1072801 1 NC_005296.1 hydrogenase expression/formation protein HupK 1072801 hupK 2690129 hupK Rhodopseudomonas palustris CGA009 hydrogenase expression/formation protein HupK NP_946323.1 1071692 D 258594 CDS NP_946324.1 39934048 2689839 1072794..1073135 1 NC_005296.1 hydrogenase formation/expression protein HypA 1073135 hypA 2689839 hypA Rhodopseudomonas palustris CGA009 hydrogenase formation/expression protein HypA NP_946324.1 1072794 D 258594 CDS NP_946325.1 39934049 2690124 1073135..1074091 1 NC_005296.1 hydrogenase expression/formation protein HypB 1074091 hypB 2690124 hypB Rhodopseudomonas palustris CGA009 hydrogenase expression/formation protein HypB NP_946325.1 1073135 D 258594 CDS NP_946326.1 39934050 2689719 1074096..1076369 1 NC_005296.1 hydrogenase maturation protein HypF 1076369 hypF 2689719 hypF Rhodopseudomonas palustris CGA009 hydrogenase maturation protein HypF NP_946326.1 1074096 D 258594 CDS NP_946327.1 39934051 2689916 1076369..1076602 1 NC_005296.1 hypC 1076602 hypC 2689916 hypC Rhodopseudomonas palustris CGA009 hypC NP_946327.1 1076369 D 258594 CDS NP_946328.1 39934052 2690071 1076599..1077741 1 NC_005296.1 hydrogenase expression/formation protein HypD 1077741 hypD 2690071 hypD Rhodopseudomonas palustris CGA009 hydrogenase expression/formation protein HypD NP_946328.1 1076599 D 258594 CDS NP_946329.1 39934053 2689556 1077738..1078784 1 NC_005296.1 hydrogenase expression/formation protein HypE 1078784 hypE 2689556 hypE Rhodopseudomonas palustris CGA009 hydrogenase expression/formation protein HypE NP_946329.1 1077738 D 258594 CDS NP_946330.1 39934054 2690120 1078825..1080273 1 NC_005296.1 Fis family transcriptional regulator 1080273 hoxA 2690120 hoxA Rhodopseudomonas palustris CGA009 Fis family transcriptional regulator NP_946330.1 1078825 D 258594 CDS NP_946331.1 39934055 2690142 1080263..1081615 1 NC_005296.1 sensor histidine kinase 1081615 2690142 RPA0980 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_946331.1 1080263 D 258594 CDS NP_946332.1 39934056 2690138 1081721..1084108 1 NC_005296.1 sensor histidine kinase 1084108 2690138 RPA0981 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_946332.1 1081721 D 258594 CDS NP_946333.1 39934057 2689836 complement(1084132..1084923) 1 NC_005296.1 transcriptional regulator PcaR 1084923 pcaR 2689836 pcaR Rhodopseudomonas palustris CGA009 transcriptional regulator PcaR NP_946333.1 1084132 R 258594 CDS NP_946334.1 39934058 2690141 1085284..1086642 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phthalate 4,5-dioxygenase 1086642 2690141 RPA0983 Rhodopseudomonas palustris CGA009 phthalate 4,5-dioxygenase NP_946334.1 1085284 D 258594 CDS NP_946335.1 39934059 2689056 1086639..1088099 1 NC_005296.1 glutamine synthetase 1088099 glnA4 2689056 glnA4 Rhodopseudomonas palustris CGA009 glutamine synthetase NP_946335.1 1086639 D 258594 CDS NP_946336.1 39934060 2690109 1088146..1089318 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system substrate-binding protein 1089318 2690109 RPA0985 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system substrate-binding protein NP_946336.1 1088146 D 258594 CDS NP_946337.1 39934061 2688815 1089530..1090396 1 NC_005296.1 urea/short-chain amide transport system permease 1090396 2688815 RPA0986 Rhodopseudomonas palustris CGA009 urea/short-chain amide transport system permease NP_946337.1 1089530 D 258594 CDS NP_946338.1 39934062 2688919 1090399..1091397 1 NC_005296.1 branched chain amino acid ABC transporter permease 1091397 2688919 RPA0987 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter permease NP_946338.1 1090399 D 258594 CDS NP_946339.1 39934063 2690007 1091394..1092158 1 NC_005296.1 branched-chain amino acid ABC transporter ATP-binding protein 1092158 2690007 RPA0988 Rhodopseudomonas palustris CGA009 branched-chain amino acid ABC transporter ATP-binding protein NP_946339.1 1091394 D 258594 CDS NP_946340.1 39934064 2690008 1092139..1092852 1 NC_005296.1 ABC transporter ATP-binding protein 1092852 2690008 RPA0989 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946340.1 1092139 D 258594 CDS NP_946341.1 39934065 2688807 complement(1092866..1095403) 1 NC_005296.1 bacteriophytochrome PhyB 1095403 phyB5 2688807 phyB5 Rhodopseudomonas palustris CGA009 bacteriophytochrome PhyB NP_946341.1 1092866 R 258594 CDS NP_946342.1 39934066 2691618 1095619..1096404 1 NC_005296.1 Crp/Fnr family transcriptional regulator 1096404 2691618 RPA0991 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_946342.1 1095619 D 258594 CDS NP_946343.1 39934067 2690006 complement(1096426..1097157) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Crp/Fnr family transcriptional regulator 1097157 2690006 RPA0992 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_946343.1 1096426 R 258594 CDS NP_946344.1 39934068 2690053 1097324..1097899 1 NC_005296.1 alpha-ribazole-5'-phosphate phosphatase 1097899 2690053 RPA0993 Rhodopseudomonas palustris CGA009 alpha-ribazole-5'-phosphate phosphatase NP_946344.1 1097324 D 258594 CDS NP_946345.1 39934069 2690035 1098342..1098677 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1098677 2690035 RPA0994 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946345.1 1098342 D 258594 CDS NP_946346.1 39934070 2690107 complement(1098742..1099887) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 1099887 2690107 RPA0995 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_946346.1 1098742 R 258594 CDS NP_946347.1 39934071 2690078 complement(1100262..1101284) 1 NC_005296.1 alpha/beta hydrolase 1101284 2690078 RPA0996 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase NP_946347.1 1100262 R 258594 CDS NP_946348.1 39934072 2689787 1101329..1101757 1 NC_005296.1 ArsR family transcriptional regulator 1101757 2689787 RPA0997 Rhodopseudomonas palustris CGA009 ArsR family transcriptional regulator NP_946348.1 1101329 D 258594 CDS NP_946349.1 39934073 2690088 complement(1101771..1102151) 1 NC_005296.1 rhodanese-like protein 1102151 2690088 RPA0998 Rhodopseudomonas palustris CGA009 rhodanese-like protein NP_946349.1 1101771 R 258594 CDS NP_946350.1 39934074 2689789 1102360..1102974 1 NC_005296.1 hypothetical protein 1102974 PA5115 2689789 PA5115 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946350.1 1102360 D 258594 CDS NP_946351.1 39934075 2690080 complement(1102982..1103377) 1 NC_005296.1 nitrogenase-associated protein 1103377 2690080 RPA1000 Rhodopseudomonas palustris CGA009 nitrogenase-associated protein NP_946351.1 1102982 R 258594 CDS NP_946352.1 39934076 2689842 complement(1103391..1103981) 1 NC_005296.1 hypothetical protein 1103981 2689842 RPA1001 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946352.1 1103391 R 258594 CDS NP_946353.1 39934077 2690031 1104195..1105070 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pyrophosphorylase ModD 1105070 modD 2690031 modD Rhodopseudomonas palustris CGA009 pyrophosphorylase ModD NP_946353.1 1104195 D 258594 CDS NP_946354.1 39934078 2690022 complement(1105201..1106835) 1 NC_005296.1 acyl-CoA synthase 1106835 2690022 RPA1003 Rhodopseudomonas palustris CGA009 acyl-CoA synthase NP_946354.1 1105201 R 258594 CDS NP_946355.1 39934079 2689762 1107079..1107285 1 NC_005296.1 hypothetical protein 1107285 2689762 RPA1004 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946355.1 1107079 D 258594 CDS NP_946356.1 39934080 2689364 1107364..1108014 1 NC_005296.1 NUDIX hydrolase 1108014 2689364 RPA1005 Rhodopseudomonas palustris CGA009 NUDIX hydrolase NP_946356.1 1107364 D 258594 CDS NP_946357.1 39934081 2689555 1108128..1108529 1 NC_005296.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit alpha 1108529 2689555 RPA1006 Rhodopseudomonas palustris CGA009 protocatechuate 4,5-dioxygenase subunit alpha NP_946357.1 1108128 D 258594 CDS NP_946358.1 39934082 2690048 1108545..1109402 1 NC_005296.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit beta 1109402 mhpB 2690048 mhpB Rhodopseudomonas palustris CGA009 protocatechuate 4,5-dioxygenase subunit beta NP_946358.1 1108545 D 258594 CDS NP_946359.1 39934083 2689956 complement(1109469..1110359) 1 NC_005296.1 AraC family transcriptional regulator 1110359 2689956 RPA1008 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_946359.1 1109469 R 258594 CDS NP_946360.1 39934084 2690042 1110510..1111697 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome P450 1111697 2690042 RPA1009 Rhodopseudomonas palustris CGA009 cytochrome P450 NP_946360.1 1110510 D 258594 CDS NP_946361.1 39934085 2689895 complement(1111734..1113680) 1 NC_005296.1 beta-lactamase-like protein 1113680 2689895 RPA1010 Rhodopseudomonas palustris CGA009 beta-lactamase-like protein NP_946361.1 1111734 R 258594 CDS NP_946362.1 39934086 2690025 1113940..1114593 1 NC_005296.1 DSBA oxidoreductase 1114593 2690025 RPA1011 Rhodopseudomonas palustris CGA009 DSBA oxidoreductase NP_946362.1 1113940 D 258594 CDS NP_946363.1 39934087 2689996 1114724..1115488 1 NC_005296.1 integral membrane protein 1115488 2689996 RPA1012 Rhodopseudomonas palustris CGA009 integral membrane protein NP_946363.1 1114724 D 258594 CDS NP_946364.1 39934088 2690014 complement(1115514..1116956) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitrogen fixation protein FixG 1116956 fixG 2690014 fixG Rhodopseudomonas palustris CGA009 nitrogen fixation protein FixG NP_946364.1 1115514 R 258594 CDS NP_946365.1 39934089 2689763 complement(1117075..1117368) 1 NC_005296.1 hypothetical protein 1117368 2689763 RPA1014 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946365.1 1117075 R 258594 CDS NP_946366.1 39934090 2689929 1117580..1118170 1 NC_005296.1 PadR family transcriptional regulator 1118170 2689929 RPA1015 Rhodopseudomonas palustris CGA009 PadR family transcriptional regulator NP_946366.1 1117580 D 258594 CDS NP_946367.1 39934091 2689843 1118259..1118792 1 NC_005296.1 ubiquinol-cytochrome-c reductase Rieske iron-sulfur protein 1118792 petA 2689843 petA Rhodopseudomonas palustris CGA009 ubiquinol-cytochrome-c reductase Rieske iron-sulfur protein NP_946367.1 1118259 D 258594 CDS NP_946368.1 39934092 2692980 1119042..1119434 1 NC_005296.1 nitrogen fixation-like protein 1119434 2692980 RPA1017 Rhodopseudomonas palustris CGA009 nitrogen fixation-like protein NP_946368.1 1119042 D 258594 CDS NP_946369.1 39934093 2691573 complement(1119616..1119816) 1 NC_005296.1 hypothetical protein 1119816 2691573 RPA1018 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946369.1 1119616 R 258594 CDS NP_946370.1 39934094 2691519 1119897..1120238 1 NC_005296.1 NolR/HlyU transcriptional regulator 1120238 2691519 RPA1019 Rhodopseudomonas palustris CGA009 NolR/HlyU transcriptional regulator NP_946370.1 1119897 D 258594 CDS NP_946371.1 39934095 2691527 1120240..1121235 1 NC_005296.1 secretion protein HlyD 1121235 2691527 RPA1020 Rhodopseudomonas palustris CGA009 secretion protein HlyD NP_946371.1 1120240 D 258594 CDS NP_946372.1 39934096 2691579 1121232..1124456 1 NC_005296.1 AcrB/AcrD/AcrF family transporter 1124456 2691579 RPA1021 Rhodopseudomonas palustris CGA009 AcrB/AcrD/AcrF family transporter NP_946372.1 1121232 D 258594 CDS NP_946373.1 39934097 2688907 1124518..1125171 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane protein 1125171 2688907 RPA1022 Rhodopseudomonas palustris CGA009 outer membrane protein NP_946373.1 1124518 D 258594 CDS NP_946374.1 39934098 2688860 1125380..1125691 1 NC_005296.1 hypothetical protein 1125691 2688860 RPA1023 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946374.1 1125380 D 258594 CDS NP_946375.1 39934099 2688842 1125696..1126958 1 NC_005296.1 oxidoreductase 1126958 2688842 RPA1024 Rhodopseudomonas palustris CGA009 oxidoreductase NP_946375.1 1125696 D 258594 CDS NP_946376.1 39934100 2691279 1126955..1127320 1 NC_005296.1 cytochrome b5 1127320 2691279 RPA1025 Rhodopseudomonas palustris CGA009 cytochrome b5 NP_946376.1 1126955 D 258594 CDS NP_946377.1 39934101 2688991 complement(1127420..1128550) 1 NC_005296.1 DNA methylase N-4/N-6 1128550 2688991 RPA1026 Rhodopseudomonas palustris CGA009 DNA methylase N-4/N-6 NP_946377.1 1127420 R 258594 CDS NP_946378.1 39934102 2691325 1128929..1129846 1 NC_005296.1 hypothetical protein 1129846 2691325 RPA1027 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946378.1 1128929 D 258594 CDS NP_946379.1 39934103 2688946 1129985..1130533 1 NC_005296.1 molybdopterin biosynthesis protein B 1130533 moaB 2688946 moaB Rhodopseudomonas palustris CGA009 molybdopterin biosynthesis protein B NP_946379.1 1129985 D 258594 CDS NP_946380.1 39934104 2691345 1130697..1131464 1 NC_005296.1 CoA transferase subunit A 1131464 2691345 RPA1029 Rhodopseudomonas palustris CGA009 CoA transferase subunit A NP_946380.1 1130697 D 258594 CDS NP_946381.1 39934105 2691620 1131461..1132213 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; CoA transferase subunit B 1132213 2691620 RPA1030 Rhodopseudomonas palustris CGA009 CoA transferase subunit B NP_946381.1 1131461 D 258594 CDS NP_946382.1 39934106 2688942 complement(1132371..1133378) 1 NC_005296.1 MarR family transcriptional regulator 1133378 2688942 RPA1031 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_946382.1 1132371 R 258594 CDS NP_946383.1 39934107 2688926 complement(1133477..1134043) 1 NC_005296.1 glycosyl transferase family protein 1134043 2688926 RPA1032 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_946383.1 1133477 R 258594 CDS NP_946384.1 39934108 2688935 1134224..1135384 1 NC_005296.1 radical SAM family protein 1135384 2688935 RPA1033 Rhodopseudomonas palustris CGA009 radical SAM family protein NP_946384.1 1134224 D 258594 CDS NP_946385.1 39934109 2691586 1135479..1136393 1 NC_005296.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1136393 rnhB 2691586 rnhB Rhodopseudomonas palustris CGA009 ribonuclease HII NP_946385.1 1135479 D 258594 CDS NP_946386.1 39934110 2688998 1136390..1137973 1 NC_005296.1 hypothetical protein 1137973 2688998 RPA1035 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946386.1 1136390 D 258594 CDS NP_946387.1 39934111 2688789 complement(1138032..1138862) 1 NC_005296.1 phage SPO1 DNA polymerase-like protein 1138862 polN 2688789 polN Rhodopseudomonas palustris CGA009 phage SPO1 DNA polymerase-like protein NP_946387.1 1138032 R 258594 CDS NP_946388.1 39934112 2691310 1139064..1140722 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; electron-transferring-flavoprotein dehydrogenase 1140722 2691310 RPA1037 Rhodopseudomonas palustris CGA009 electron-transferring-flavoprotein dehydrogenase NP_946388.1 1139064 D 258594 CDS NP_946389.1 39934113 2688931 1140980..1142764 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TPR repeat-containing protein 1142764 2688931 RPA1038 Rhodopseudomonas palustris CGA009 TPR repeat-containing protein NP_946389.1 1140980 D 258594 CDS NP_946390.1 39934114 2691398 1142869..1143768 1 NC_005296.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1143768 ispE 2691398 ispE Rhodopseudomonas palustris CGA009 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase NP_946390.1 1142869 D 258594 CDS NP_946391.1 39934115 2688912 complement(1143914..1144924) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; farnesyltranstransferase 1144924 2688912 RPA1040 Rhodopseudomonas palustris CGA009 farnesyltranstransferase NP_946391.1 1143914 R 258594 CDS NP_946392.1 39934116 2691438 1145132..1145359 1 NC_005296.1 hypothetical protein 1145359 2691438 RPA1041 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946392.1 1145132 D 258594 CDS NP_946393.1 39934117 2688981 1145352..1146131 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyltransferase small 1146131 2688981 RPA1042 Rhodopseudomonas palustris CGA009 methyltransferase small NP_946393.1 1145352 D 258594 CDS NP_946394.1 39934118 2691508 1146377..1147279 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase S49 1147279 2691508 RPA1043 Rhodopseudomonas palustris CGA009 peptidase S49 NP_946394.1 1146377 D 258594 CDS NP_946395.1 39934119 2691291 complement(1147380..1147691) 1 NC_005296.1 hypothetical protein 1147691 2691291 RPA1044 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946395.1 1147380 R 258594 CDS NP_946396.1 39934120 2691584 1147992..1148942 1 NC_005296.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1148942 glyQ 2691584 glyQ Rhodopseudomonas palustris CGA009 glycyl-tRNA synthetase subunit alpha NP_946396.1 1147992 D 258594 CDS NP_946397.1 39934121 2691529 1149072..1149506 1 NC_005296.1 hypothetical protein 1149506 2691529 RPA1046 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946397.1 1149072 D 258594 CDS NP_946398.1 39934122 2691523 1149506..1151836 1 NC_005296.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1151836 glyS 2691523 glyS Rhodopseudomonas palustris CGA009 glycyl-tRNA synthetase subunit beta NP_946398.1 1149506 D 258594 CDS NP_946399.1 39934123 2688898 1152596..1153699 1 NC_005296.1 hypothetical protein 1153699 2688898 RPA1048 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946399.1 1152596 D 258594 CDS NP_946400.1 39934124 2688855 complement(1153713..1155209) 1 NC_005296.1 hypothetical protein 1155209 2688855 RPA1049 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946400.1 1153713 R 258594 CDS NP_946401.1 39934125 2688894 1155473..1155628 1 NC_005296.1 hypothetical protein 1155628 2688894 RPA1050 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946401.1 1155473 D 258594 CDS NP_946402.1 39934126 2691542 1156005..1158746 1 NC_005296.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1158746 2691542 RPA1051 Rhodopseudomonas palustris CGA009 pyruvate phosphate dikinase NP_946402.1 1156005 D 258594 CDS NP_946403.1 39934127 2691525 1159062..1160492 1 NC_005296.1 cell wall hydrolase SleB 1160492 2691525 RPA1052 Rhodopseudomonas palustris CGA009 cell wall hydrolase SleB NP_946403.1 1159062 D 258594 CDS NP_946404.1 39934128 2691417 complement(1161049..1161924) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nicotinate-nucleotide pyrophosphorylase 1161924 nadC 2691417 nadC Rhodopseudomonas palustris CGA009 nicotinate-nucleotide pyrophosphorylase NP_946404.1 1161049 R 258594 CDS NP_946405.1 39934129 2689136 complement(1161941..1163557) 1 NC_005296.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 1163557 nadB 2689136 nadB Rhodopseudomonas palustris CGA009 L-aspartate oxidase NP_946405.1 1161941 R 258594 CDS NP_946406.1 39934130 2688941 complement(1163651..1164763) 1 NC_005296.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1164763 nadA 2688941 nadA Rhodopseudomonas palustris CGA009 quinolinate synthetase NP_946406.1 1163651 R 258594 CDS NP_946407.1 39934131 2691635 1165116..1166102 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; zinc-binding alcohol dehydrogenase 1166102 2691635 RPA1056 Rhodopseudomonas palustris CGA009 zinc-binding alcohol dehydrogenase NP_946407.1 1165116 D 258594 CDS NP_946408.1 39934132 2688806 1166217..1166786 1 NC_005296.1 hypothetical protein 1166786 2688806 RPA1057 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946408.1 1166217 D 258594 CDS NP_946409.1 39934133 2689167 1167398..1168333 1 NC_005296.1 AraC family transcriptional regulator 1168333 2689167 RPA1058 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_946409.1 1167398 D 258594 CDS NP_946410.1 39934134 2688809 1168419..1170635 1 NC_005296.1 outer membrane protein TonB-dependent receptor 1170635 2688809 RPA1059 Rhodopseudomonas palustris CGA009 outer membrane protein TonB-dependent receptor NP_946410.1 1168419 D 258594 CDS NP_946411.1 39934135 2688813 1170643..1171086 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1171086 2688813 RPA1060 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946411.1 1170643 D 258594 CDS NP_946412.1 39934136 2689069 1171079..1171933 1 NC_005296.1 polyketide synthase 1171933 tcmP 2689069 tcmP Rhodopseudomonas palustris CGA009 polyketide synthase NP_946412.1 1171079 D 258594 CDS NP_946413.1 39934137 2689068 complement(1171930..1174602) 1 NC_005296.1 hypothetical protein 1174602 2689068 RPA1062 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946413.1 1171930 R 258594 CDS NP_946414.1 39934138 2689072 complement(1174654..1175649) 1 NC_005296.1 hypothetical protein 1175649 2689072 RPA1063 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946414.1 1174654 R 258594 CDS NP_946415.1 39934139 2689108 complement(1175646..1176152) 1 NC_005296.1 hypothetical protein 1176152 2689108 RPA1064 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946415.1 1175646 R 258594 CDS NP_946416.1 39934140 2689055 complement(1176219..1176836) 1 NC_005296.1 metal dependent phosphohydrolase 1176836 2689055 RPA1065 Rhodopseudomonas palustris CGA009 metal dependent phosphohydrolase NP_946416.1 1176219 R 258594 CDS NP_946417.1 39934141 2689062 1176912..1177184 1 NC_005296.1 hypothetical protein 1177184 2689062 RPA1066 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946417.1 1176912 D 258594 CDS NP_946418.1 39934142 2689028 complement(1177191..1177847) 1 NC_005296.1 DNA-3-methyladenine glycosylase I 1177847 tag 2689028 tag Rhodopseudomonas palustris CGA009 DNA-3-methyladenine glycosylase I NP_946418.1 1177191 R 258594 CDS NP_946419.1 39934143 2689011 complement(1177844..1178725) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glycine cleavage T protein (aminomethyl transferase) 1178725 2689011 RPA1068 Rhodopseudomonas palustris CGA009 glycine cleavage T protein (aminomethyl transferase) NP_946419.1 1177844 R 258594 CDS NP_946420.1 39934144 2691367 1178873..1180207 1 NC_005296.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1180207 pyrC 2691367 pyrC Rhodopseudomonas palustris CGA009 dihydroorotase NP_946420.1 1178873 D 258594 CDS NP_946421.1 39934145 2691369 1180716..1180871 1 NC_005296.1 hypothetical protein 1180871 2691369 RPA1070 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946421.1 1180716 D 258594 CDS NP_946422.1 39934146 2689000 complement(1180892..1181155) 1 NC_005296.1 hypothetical protein 1181155 2689000 RPA1071 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946422.1 1180892 R 258594 CDS NP_946423.1 39934147 2689040 complement(1181286..1181726) 1 NC_005296.1 hypothetical protein 1181726 2689040 RPA1072 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946423.1 1181286 R 258594 CDS NP_946424.1 39934148 2691265 complement(1181726..1182160) 1 NC_005296.1 NUDIX hydrolase 1182160 2691265 RPA1073 Rhodopseudomonas palustris CGA009 NUDIX hydrolase NP_946424.1 1181726 R 258594 CDS NP_946425.1 39934149 2689023 complement(1182166..1182522) 1 NC_005296.1 hypothetical protein 1182522 2689023 RPA1074 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946425.1 1182166 R 258594 CDS NP_946426.1 39934150 2691368 1182725..1183498 1 NC_005296.1 hypothetical protein 1183498 2691368 RPA1075 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946426.1 1182725 D 258594 CDS NP_946427.1 39934151 2689076 complement(1183607..1185034) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FAD linked oxidase-like protein 1185034 2689076 RPA1076 Rhodopseudomonas palustris CGA009 FAD linked oxidase-like protein NP_946427.1 1183607 R 258594 CDS NP_946428.1 39934152 2689105 complement(1185153..1186199) 1 NC_005296.1 SUA5/yciO/yrdC domain-containing protein 1186199 2689105 RPA1077 Rhodopseudomonas palustris CGA009 SUA5/yciO/yrdC domain-containing protein NP_946428.1 1185153 R 258594 CDS NP_946429.1 39934153 2689065 1186379..1187281 1 NC_005296.1 AraC family transcriptional regulator 1187281 2689065 RPA1078 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_946429.1 1186379 D 258594 CDS NP_946430.1 39934154 2689083 1187407..1188693 1 NC_005296.1 4-methylmuconolactone transporter 1188693 2689083 RPA1079 Rhodopseudomonas palustris CGA009 4-methylmuconolactone transporter NP_946430.1 1187407 D 258594 CDS NP_946431.1 39934155 2689085 1188686..1189588 1 NC_005296.1 2-pyrone-4,6-dicarboxylate hydrolase 1189588 2689085 RPA1080 Rhodopseudomonas palustris CGA009 2-pyrone-4,6-dicarboxylate hydrolase NP_946431.1 1188686 D 258594 CDS NP_946432.1 39934156 2688902 complement(1189896..1190549) 1 NC_005296.1 hypothetical protein 1190549 2688902 RPA1081 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946432.1 1189896 R 258594 CDS NP_946433.1 39934157 2688905 1190900..1192234 1 NC_005296.1 hypothetical protein 1192234 2688905 RPA1082 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946433.1 1190900 D 258594 CDS NP_946434.1 39934158 2688928 1192349..1192669 1 NC_005296.1 hypothetical protein 1192669 2688928 RPA1083 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946434.1 1192349 D 258594 CDS NP_946435.1 39934159 2689125 1192666..1193157 1 NC_005296.1 minor curlin subunit 1193157 csgB 2689125 csgB Rhodopseudomonas palustris CGA009 minor curlin subunit NP_946435.1 1192666 D 258594 CDS NP_946436.1 39934160 2689155 1193154..1193570 1 NC_005296.1 hypothetical protein 1193570 2689155 RPA1085 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946436.1 1193154 D 258594 CDS NP_946437.1 39934161 2689135 1193607..1194563 1 NC_005296.1 curli production assembly/transport component csgg 1194563 csgG 2689135 csgG Rhodopseudomonas palustris CGA009 curli production assembly/transport component csgg NP_946437.1 1193607 D 258594 CDS NP_946438.1 39934162 2688913 1194566..1195360 1 NC_005296.1 transglycosylase SLT domain-containing protein 1195360 2688913 RPA1087 Rhodopseudomonas palustris CGA009 transglycosylase SLT domain-containing protein NP_946438.1 1194566 D 258594 CDS NP_946439.1 39934163 2688976 complement(1195392..1195730) 1 NC_005296.1 hypothetical protein 1195730 2688976 RPA1088 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946439.1 1195392 R 258594 CDS NP_946440.1 39934164 2688943 1195939..1196199 1 NC_005296.1 hypothetical protein 1196199 2688943 RPA1089 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946440.1 1195939 D 258594 CDS NP_946441.1 39934165 2688954 1196347..1197024 1 NC_005296.1 Crp/Fnr family transcriptional regulator 1197024 2688954 RPA1090 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_946441.1 1196347 D 258594 CDS NP_946442.1 39934166 2691304 1197140..1197328 1 NC_005296.1 hypothetical protein 1197328 2691304 RPA1091 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946442.1 1197140 D 258594 CDS NP_946443.1 39934167 2691276 1197405..1197776 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carboxymuconolactone decarboxylase 1197776 2691276 RPA1092 Rhodopseudomonas palustris CGA009 carboxymuconolactone decarboxylase NP_946443.1 1197405 D 258594 CDS NP_946444.1 39934168 2688934 1197881..1198990 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1198990 ribB 2688934 ribB Rhodopseudomonas palustris CGA009 3,4-dihydroxy-2-butanone 4-phosphate synthase NP_946444.1 1197881 D 258594 CDS NP_946445.1 39934169 2688979 1199051..1200265 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutaryl-CoA dehydrogenase 1200265 2688979 RPA1094 Rhodopseudomonas palustris CGA009 glutaryl-CoA dehydrogenase NP_946445.1 1199051 D 258594 CDS NP_946446.1 39934170 2688900 1200414..1201391 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-lactamase-like protein 1201391 2688900 RPA1095 Rhodopseudomonas palustris CGA009 beta-lactamase-like protein NP_946446.1 1200414 D 258594 CDS NP_946447.1 39934171 2691322 complement(1201404..1203155) 1 NC_005296.1 methyl-accepting chemotaxis sensory transducer 1203155 2691322 RPA1096 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_946447.1 1201404 R 258594 CDS NP_946448.1 39934172 2688916 1203352..1204098 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1204098 2688916 RPA1097 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946448.1 1203352 D 258594 CDS NP_946449.1 39934173 2688879 complement(1204145..1204450) 1 NC_005296.1 hypothetical protein 1204450 2688879 RPA1098 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946449.1 1204145 R 258594 CDS NP_946450.1 39934174 2688899 1204649..1205173 1 NC_005296.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1205173 ruvC 2688899 ruvC Rhodopseudomonas palustris CGA009 Holliday junction resolvase NP_946450.1 1204649 D 258594 CDS NP_946451.1 39934175 2688945 1205358..1205975 1 NC_005296.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1205975 ruvA 2688945 ruvA Rhodopseudomonas palustris CGA009 Holliday junction DNA helicase RuvA NP_946451.1 1205358 D 258594 CDS NP_946452.1 39934176 2691298 1205972..1206397 1 NC_005296.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; hypothetical protein 1206397 2691298 RPA1101 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946452.1 1205972 D 258594 CDS NP_946453.1 39934177 2691634 1206575..1207624 1 NC_005296.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1207624 ruvB 2691634 ruvB Rhodopseudomonas palustris CGA009 Holliday junction DNA helicase RuvB NP_946453.1 1206575 D 258594 CDS NP_946454.1 39934178 2688918 1207632..1208096 1 NC_005296.1 4-hydroxybenzoyl-CoA thioesterase 1208096 2688918 RPA1103 Rhodopseudomonas palustris CGA009 4-hydroxybenzoyl-CoA thioesterase NP_946454.1 1207632 D 258594 CDS NP_946455.1 39934179 2691392 1208196..1209506 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1209506 ndh 2691392 ndh Rhodopseudomonas palustris CGA009 FAD-dependent pyridine nucleotide-disulfide oxidoreductase NP_946455.1 1208196 D 258594 CDS NP_946456.1 39934180 2691431 1209652..1210866 1 NC_005296.1 OpgC protein 1210866 2691431 RPA1105 Rhodopseudomonas palustris CGA009 OpgC protein NP_946456.1 1209652 D 258594 CDS NP_946457.1 39934181 2691416 1210924..1211391 1 NC_005296.1 hypothetical protein 1211391 2691416 RPA1106 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946457.1 1210924 D 258594 CDS NP_946458.1 39934182 2688953 1211408..1211956 1 NC_005296.1 TetR family transcriptional regulator 1211956 2688953 RPA1107 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_946458.1 1211408 D 258594 CDS NP_946459.1 39934183 2691637 1212076..1212480 1 NC_005296.1 DGPF domain-containing protein 1212480 2691637 RPA1108 Rhodopseudomonas palustris CGA009 DGPF domain-containing protein NP_946459.1 1212076 D 258594 CDS NP_946460.1 39934184 2691537 1212477..1213745 1 NC_005296.1 RNA polymerase ECF-type sigma factor 1213745 2691537 RPA1109 Rhodopseudomonas palustris CGA009 RNA polymerase ECF-type sigma factor NP_946460.1 1212477 D 258594 CDS NP_946461.1 39934185 2691532 complement(1213766..1214554) 1 NC_005296.1 3-oxoacyl-ACP reductase 1214554 2691532 RPA1110 Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP reductase NP_946461.1 1213766 R 258594 CDS NP_946462.1 39934186 2691533 complement(1215047..1215313) 1 NC_005296.1 hypothetical protein 1215313 2691533 RPA1111 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946462.1 1215047 R 258594 CDS NP_946463.1 39934187 2691531 1215473..1215892 1 NC_005296.1 DGPF domain-containing protein 1215892 2691531 RPA1112 Rhodopseudomonas palustris CGA009 DGPF domain-containing protein NP_946463.1 1215473 D 258594 CDS NP_946464.1 39934188 2691538 1216030..1216734 1 NC_005296.1 TetR family transcriptional regulator 1216734 2691538 RPA1113 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_946464.1 1216030 D 258594 CDS NP_946465.1 39934189 2691461 1216877..1217344 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1217344 2691461 RPA1114 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946465.1 1216877 D 258594 CDS NP_946466.1 39934190 2689087 1217494..1217961 1 NC_005296.1 hypothetical protein 1217961 2689087 RPA1115 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946466.1 1217494 D 258594 CDS NP_946467.1 39934191 2691456 1217945..1218850 1 NC_005296.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 1218850 2691456 RPA1116 Rhodopseudomonas palustris CGA009 RNA polymerase sigma factor SigJ NP_946467.1 1217945 D 258594 CDS NP_946468.1 39934192 2688731 1219157..1219867 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; MotA/TolQ/ExbB proton channel 1219867 TolQ 2688731 TolQ Rhodopseudomonas palustris CGA009 MotA/TolQ/ExbB proton channel NP_946468.1 1219157 D 258594 CDS NP_946469.1 39934193 2689082 1219902..1220372 1 NC_005296.1 tolR protein 1220372 TolR 2689082 TolR Rhodopseudomonas palustris CGA009 tolR protein NP_946469.1 1219902 D 258594 CDS NP_946470.1 39934194 2689008 1220421..1221404 1 NC_005296.1 TolA 1221404 TolA 2689008 TolA Rhodopseudomonas palustris CGA009 TolA NP_946470.1 1220421 D 258594 CDS NP_946471.1 39934195 2689088 1221477..1222811 1 NC_005296.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1222811 tolB 2689088 tolB Rhodopseudomonas palustris CGA009 translocation protein TolB NP_946471.1 1221477 D 258594 CDS NP_946472.1 39934196 2689026 1222982..1225312 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 1225312 2689026 RPA1121 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_946472.1 1222982 D 258594 CDS NP_946473.1 39934197 2689077 1225507..1226256 1 NC_005296.1 hypothetical protein 1226256 2689077 RPA1122 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946473.1 1225507 D 258594 CDS NP_946474.1 39934198 2689084 1226585..1227082 1 NC_005296.1 Brucella abortus, contains similarity to peptidoglycan-associated lipoprotein precursor; observed by proteomics; OmpA/MotB 1227082 2689084 RPA1123 Rhodopseudomonas palustris CGA009 OmpA/MotB NP_946474.1 1226585 D 258594 CDS NP_946475.1 39934199 2691496 1227238..1228275 1 NC_005296.1 hypothetical protein 1228275 2691496 RPA1124 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946475.1 1227238 D 258594 CDS NP_946476.1 39934200 2691499 1228330..1229370 1 NC_005296.1 tRNA(Ile)-lysidine synthetase-like protein 1229370 2691499 RPA1125 Rhodopseudomonas palustris CGA009 tRNA(Ile)-lysidine synthetase-like protein NP_946476.1 1228330 D 258594 CDS NP_946477.1 39934201 2688947 1229602..1231518 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ATP-dependent metalloprotease FtsH 1231518 ftsH 2688947 ftsH Rhodopseudomonas palustris CGA009 ATP-dependent metalloprotease FtsH NP_946477.1 1229602 D 258594 CDS NP_946478.1 39934202 2691480 1231651..1232400 1 NC_005296.1 AzlC-like protein 1232400 2691480 RPA1127 Rhodopseudomonas palustris CGA009 AzlC-like protein NP_946478.1 1231651 D 258594 CDS NP_946479.1 39934203 2689118 1232397..1232714 1 NC_005296.1 branched chain amino acid ABC transporter 1232714 2689118 RPA1128 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter NP_946479.1 1232397 D 258594 CDS NP_946480.1 39934204 2691481 1232997..1233575 1 NC_005296.1 TetR family transcriptional regulator 1233575 2691481 RPA1129 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_946480.1 1232997 D 258594 CDS NP_946481.1 39934205 2691484 1233699..1235192 1 NC_005296.1 glycolate oxidase subunit GlcD 1235192 glcD 2691484 glcD Rhodopseudomonas palustris CGA009 glycolate oxidase subunit GlcD NP_946481.1 1233699 D 258594 CDS NP_946482.1 39934206 2688803 1235355..1236596 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FAD linked oxidase-like protein 1236596 2688803 RPA1131 Rhodopseudomonas palustris CGA009 FAD linked oxidase-like protein NP_946482.1 1235355 D 258594 CDS NP_946483.1 39934207 2691488 1236593..1237906 1 NC_005296.1 glycolate oxidase subunit (Fe-S)protein GlcF 1237906 glcF 2691488 glcF Rhodopseudomonas palustris CGA009 glycolate oxidase subunit (Fe-S)protein GlcF NP_946483.1 1236593 D 258594 CDS NP_946484.1 39934208 2691548 1237981..1238919 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1238919 2691548 RPA1133 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946484.1 1237981 D 258594 CDS NP_946485.1 39934209 2691547 1239338..1240309 1 NC_005296.1 hypothetical protein 1240309 2691547 RPA1134 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946485.1 1239338 D 258594 CDS NP_946486.1 39934210 2691615 complement(1240568..1242328) 1 NC_005296.1 ABC transporter permease/ATP-binding protein 1242328 2691615 RPA1135 Rhodopseudomonas palustris CGA009 ABC transporter permease/ATP-binding protein NP_946486.1 1240568 R 258594 CDS NP_946487.1 39934211 2691614 1242599..1244263 1 NC_005296.1 L-lactate permease 1244263 ictP 2691614 ictP Rhodopseudomonas palustris CGA009 L-lactate permease NP_946487.1 1242599 D 258594 CDS NP_946488.1 39934212 2691613 1244408..1244824 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1244824 2691613 RPA1137 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946488.1 1244408 D 258594 CDS NP_946489.1 39934213 2688867 complement(1244827..1246332) 1 NC_005296.1 FAD dependent oxidoreductase 1246332 2688867 RPA1138 Rhodopseudomonas palustris CGA009 FAD dependent oxidoreductase NP_946489.1 1244827 R 258594 CDS NP_946490.1 39934214 2688748 complement(1246445..1247638) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1247638 2688748 RPA1139 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946490.1 1246445 R 258594 CDS NP_946491.1 39934215 2688736 complement(1247853..1249496) 1 NC_005296.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is not associated with a groES gene; molecular chaperone GroEL 1249496 groEL 2688736 groEL Rhodopseudomonas palustris CGA009 molecular chaperone GroEL NP_946491.1 1247853 R 258594 CDS NP_946492.1 39934216 2691610 complement(1249536..1249832) 1 NC_005296.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1249832 groES 2691610 groES Rhodopseudomonas palustris CGA009 co-chaperonin GroES NP_946492.1 1249536 R 258594 CDS NP_946493.1 39934217 2691603 1250132..1250647 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1250647 2691603 RPA1142 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946493.1 1250132 D 258594 CDS NP_946494.1 39934218 2691606 1250691..1251899 1 NC_005296.1 major facilitator transporter 1251899 2691606 RPA1143 Rhodopseudomonas palustris CGA009 major facilitator transporter NP_946494.1 1250691 D 258594 CDS NP_946495.1 39934219 2691436 complement(1251915..1252706) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1252706 2691436 RPA1144 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946495.1 1251915 R 258594 CDS NP_946496.1 39934220 2691597 1252992..1253795 1 NC_005296.1 ErfK/YbiS/YcfS/YnhG protein 1253795 2691597 RPA1145 Rhodopseudomonas palustris CGA009 ErfK/YbiS/YcfS/YnhG protein NP_946496.1 1252992 D 258594 CDS NP_946497.1 39934221 2691600 complement(1253883..1254737) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; periplasmic ligand-binding sensor protein 1254737 2691600 RPA1146 Rhodopseudomonas palustris CGA009 periplasmic ligand-binding sensor protein NP_946497.1 1253883 R 258594 CDS NP_946498.1 39934222 2691560 complement(1254853..1255746) 1 NC_005296.1 hypothetical protein 1255746 2691560 RPA1147 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946498.1 1254853 R 258594 CDS NP_946499.1 39934223 2688741 complement(1255743..1256786) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; family 2 glycosyl transferase 1256786 2688741 RPA1148 Rhodopseudomonas palustris CGA009 family 2 glycosyl transferase NP_946499.1 1255743 R 258594 CDS NP_946500.1 39934224 2688836 complement(1256880..1257857) 1 NC_005296.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 1257857 hisG 2688836 hisG Rhodopseudomonas palustris CGA009 ATP phosphoribosyltransferase NP_946500.1 1256880 R 258594 CDS NP_946501.1 39934225 2688951 complement(1257854..1259002) 1 NC_005296.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 1259002 hisZ 2688951 hisZ Rhodopseudomonas palustris CGA009 ATP phosphoribosyltransferase NP_946501.1 1257854 R 258594 CDS NP_946502.1 39934226 2688870 complement(1259147..1259902) 1 NC_005296.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1259902 2688870 RPA1151 Rhodopseudomonas palustris CGA009 16S ribosomal RNA methyltransferase RsmE NP_946502.1 1259147 R 258594 CDS NP_946503.1 39934227 2689141 1260277..1260810 1 NC_005296.1 hypothetical protein 1260810 2689141 RPA1152 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946503.1 1260277 D 258594 CDS NP_946504.1 39934228 2688937 1260807..1261757 1 NC_005296.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 1261757 ubiA 2688937 ubiA Rhodopseudomonas palustris CGA009 4-hydroxybenzoate polyprenyltransferase NP_946504.1 1260807 D 258594 CDS NP_946505.1 39934229 2688833 complement(1261793..1262317) 1 NC_005296.1 hypothetical protein 1262317 2688833 RPA1154 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946505.1 1261793 R 258594 CDS NP_946506.1 39934230 2689124 1262616..1264013 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase U62 1264013 2689124 RPA1155 Rhodopseudomonas palustris CGA009 peptidase U62 NP_946506.1 1262616 D 258594 CDS NP_946507.1 39934231 2691550 1264072..1264815 1 NC_005296.1 myo-inositol monophosphatase 2 family protein 1264815 2691550 RPA1156 Rhodopseudomonas palustris CGA009 myo-inositol monophosphatase 2 family protein NP_946507.1 1264072 D 258594 CDS NP_946508.1 39934232 2688801 1264853..1265101 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1265101 2688801 RPA1157 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946508.1 1264853 D 258594 CDS NP_946509.1 39934233 2691540 1265171..1266475 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-deoxy-D-manno-octulosonic-acid transferase 1266475 2691540 RPA1158 Rhodopseudomonas palustris CGA009 3-deoxy-D-manno-octulosonic-acid transferase NP_946509.1 1265171 D 258594 CDS NP_946510.1 39934234 2691625 1266468..1267490 1 NC_005296.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 1267490 lpxK 2691625 lpxK Rhodopseudomonas palustris CGA009 tetraacyldisaccharide 4'-kinase NP_946510.1 1266468 D 258594 CDS NP_946511.1 39934235 2689114 complement(1267500..1267835) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1267835 2689114 RPA1160 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946511.1 1267500 R 258594 CDS NP_946512.1 39934236 2689115 complement(1267876..1269489) 1 NC_005296.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1269489 xseA 2689115 xseA Rhodopseudomonas palustris CGA009 exodeoxyribonuclease VII large subunit NP_946512.1 1267876 R 258594 CDS NP_946513.1 39934237 2688999 1269727..1271010 1 NC_005296.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1271010 garS 2688999 garS Rhodopseudomonas palustris CGA009 phosphoribosylamine--glycine ligase NP_946513.1 1269727 D 258594 CDS NP_946514.1 39934238 2688738 1271174..1272082 1 NC_005296.1 epoxide hydrolase 1272082 2688738 RPA1163 Rhodopseudomonas palustris CGA009 epoxide hydrolase NP_946514.1 1271174 D 258594 CDS NP_946515.1 39934239 2689113 complement(1272066..1272512) 1 NC_005296.1 zinc-binding CMP/dCMP deaminase 1272512 2689113 RPA1164 Rhodopseudomonas palustris CGA009 zinc-binding CMP/dCMP deaminase NP_946515.1 1272066 R 258594 CDS NP_946516.1 39934240 2689106 1272678..1274873 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pseudouridine synthase 1274873 2689106 RPA1165 Rhodopseudomonas palustris CGA009 pseudouridine synthase NP_946516.1 1272678 D 258594 CDS NP_946517.1 39934241 2689148 1275097..1275678 1 NC_005296.1 N-6 adenine-specific DNA methylase 1275678 2689148 RPA1166 Rhodopseudomonas palustris CGA009 N-6 adenine-specific DNA methylase NP_946517.1 1275097 D 258594 CDS NP_946518.1 39934242 2691621 complement(1275882..1276904) 1 NC_005296.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1276904 yfcB 2691621 yfcB Rhodopseudomonas palustris CGA009 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase NP_946518.1 1275882 R 258594 CDS NP_946519.1 39934243 2691346 complement(1276904..1277371) 1 NC_005296.1 molybdopterin biosynthesis MoaE 1277371 moaE 2691346 moaE Rhodopseudomonas palustris CGA009 molybdopterin biosynthesis MoaE NP_946519.1 1276904 R 258594 CDS NP_946520.1 39934244 2688923 complement(1277397..1277648) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; molybdopterin converting factor subunit 1 1277648 moaD 2688923 moaD Rhodopseudomonas palustris CGA009 molybdopterin converting factor subunit 1 NP_946520.1 1277397 R 258594 CDS NP_946521.1 39934245 2688893 complement(1277645..1278271) 1 NC_005296.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1278271 pgsA 2688893 pgsA Rhodopseudomonas palustris CGA009 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase NP_946521.1 1277645 R 258594 CDS NP_946522.1 39934246 2691335 complement(1278411..1280525) 1 NC_005296.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1280525 uvrC 2691335 uvrC Rhodopseudomonas palustris CGA009 excinuclease ABC subunit C NP_946522.1 1278411 R 258594 CDS NP_946523.1 39934247 2688958 1280779..1281459 1 NC_005296.1 outer membrane protein 1281459 2688958 RPA1172 Rhodopseudomonas palustris CGA009 outer membrane protein NP_946523.1 1280779 D 258594 CDS NP_946524.1 39934248 2691311 complement(1281878..1282138) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cold-shock DNA-binding domain-containing protein 1282138 cspA1 2691311 cspA1 Rhodopseudomonas palustris CGA009 cold-shock DNA-binding domain-containing protein NP_946524.1 1281878 R 258594 CDS NP_946525.1 39934249 2691633 complement(1282367..1283224) 1 NC_005296.1 hypothetical protein 1283224 2691633 RPA1174 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946525.1 1282367 R 258594 CDS NP_946526.1 39934250 2691632 1283518..1283913 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis protein CheY 1283913 2691632 RPA1175 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_946526.1 1283518 D 258594 CDS NP_946527.1 39934251 2691626 complement(1283999..1284394) 1 NC_005296.1 hypothetical protein 1284394 2691626 RPA1176 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946527.1 1283999 R 258594 CDS NP_946528.1 39934252 2688972 complement(1284607..1284810) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 4-oxalocrotonate tautomerase 1284810 2688972 RPA1177 Rhodopseudomonas palustris CGA009 4-oxalocrotonate tautomerase NP_946528.1 1284607 R 258594 CDS NP_946529.1 39934253 2688977 complement(1284950..1286521) 1 NC_005296.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1286521 hisS 2688977 hisS Rhodopseudomonas palustris CGA009 histidyl-tRNA synthetase NP_946529.1 1284950 R 258594 CDS NP_946530.1 39934254 2691629 1286629..1288083 1 NC_005296.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1288083 2691629 RPA1179 Rhodopseudomonas palustris CGA009 beta alanine--pyruvate transaminase NP_946530.1 1286629 D 258594 CDS NP_946531.1 39934255 2691611 1288180..1289745 1 NC_005296.1 cylclic diguanylate phosphodiesterase 1289745 2691611 RPA1180 Rhodopseudomonas palustris CGA009 cylclic diguanylate phosphodiesterase NP_946531.1 1288180 D 258594 CDS NP_946532.1 39934256 2691353 1289758..1290612 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; HAD-superfamily hydrolase 1290612 2691353 RPA1181 Rhodopseudomonas palustris CGA009 HAD-superfamily hydrolase NP_946532.1 1289758 D 258594 CDS NP_946533.1 39934257 2691286 complement(1290644..1292707) 1 NC_005296.1 hypothetical protein 1292707 2691286 RPA1182 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946533.1 1290644 R 258594 CDS NP_946534.1 39934258 2689151 complement(1292874..1295699) 1 NC_005296.1 double-transmembrane region-like protein 1295699 2689151 RPA1183 Rhodopseudomonas palustris CGA009 double-transmembrane region-like protein NP_946534.1 1292874 R 258594 CDS NP_946535.1 39934259 2691299 complement(1295696..1296628) 1 NC_005296.1 hypothetical protein 1296628 2691299 RPA1184 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946535.1 1295696 R 258594 CDS NP_946536.1 39934260 2691429 complement(1296628..1297731) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ATPase 1297731 2691429 RPA1185 Rhodopseudomonas palustris CGA009 ATPase NP_946536.1 1296628 R 258594 CDS NP_946537.1 39934261 2691472 1297866..1298477 1 NC_005296.1 hypothetical protein 1298477 2691472 RPA1186 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946537.1 1297866 D 258594 CDS NP_946538.1 39934262 2691473 1298486..1299151 1 NC_005296.1 NUDIX hydrolase 1299151 2691473 RPA1187 Rhodopseudomonas palustris CGA009 NUDIX hydrolase NP_946538.1 1298486 D 258594 CDS NP_946539.1 39934263 2691476 1299408..1300664 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; polynucleotide adenylyltransferase 1300664 2691476 RPA1188 Rhodopseudomonas palustris CGA009 polynucleotide adenylyltransferase NP_946539.1 1299408 D 258594 CDS NP_946540.1 39934264 2691478 complement(1300794..1301021) 1 NC_005296.1 hypothetical protein 1301021 2691478 RPA1189 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946540.1 1300794 R 258594 CDS NP_946541.1 39934265 2691556 complement(1301099..1301731) 1 NC_005296.1 hypothetical protein 1301731 2691556 RPA1190 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946541.1 1301099 R 258594 CDS NP_946542.1 39934266 2691553 complement(1301742..1302197) 1 NC_005296.1 RNA methyltransferase 1302197 2691553 RPA1191 Rhodopseudomonas palustris CGA009 RNA methyltransferase NP_946542.1 1301742 R 258594 CDS NP_946543.1 39934267 2691558 1302375..1303001 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome b6-F complex iron-sulfur subunit 1303001 2691558 RPA1192 Rhodopseudomonas palustris CGA009 cytochrome b6-F complex iron-sulfur subunit NP_946543.1 1302375 D 258594 CDS NP_946544.1 39934268 2691443 1303042..1305108 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome c1 1305108 2691443 RPA1193 Rhodopseudomonas palustris CGA009 cytochrome c1 NP_946544.1 1303042 D 258594 CDS NP_946545.1 39934269 2691448 1305267..1305941 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carboxymethylenebutenolidase 1305941 2691448 RPA1194 Rhodopseudomonas palustris CGA009 carboxymethylenebutenolidase NP_946545.1 1305267 D 258594 CDS NP_946546.1 39934270 2691447 complement(1306424..1307200) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase 1307200 fixR1 2691447 fixR1 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase NP_946546.1 1306424 R 258594 CDS NP_946547.1 39934271 2691450 complement(1307197..1307835) 1 NC_005296.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 1307835 pdxH 2691450 pdxH Rhodopseudomonas palustris CGA009 pyridoxamine 5'-phosphate oxidase NP_946547.1 1307197 R 258594 CDS NP_946548.1 39934272 2691449 1307959..1308369 1 NC_005296.1 hypothetical protein 1308369 2691449 RPA1197 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946548.1 1307959 D 258594 CDS NP_946549.1 39934273 2688796 1308489..1309457 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; heat shock protein DnaJ 1309457 2688796 RPA1198 Rhodopseudomonas palustris CGA009 heat shock protein DnaJ NP_946549.1 1308489 D 258594 CDS NP_946550.1 39934274 2691385 1309856..1310677 1 NC_005296.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1310677 2691385 RPA1199 Rhodopseudomonas palustris CGA009 enoyl-ACP reductase NP_946550.1 1309856 D 258594 CDS NP_946551.1 39934275 2688948 1310785..1311378 1 NC_005296.1 phosphoglycerate mutase 1311378 2688948 RPA1200 Rhodopseudomonas palustris CGA009 phosphoglycerate mutase NP_946551.1 1310785 D 258594 CDS NP_946552.1 39934276 2691420 1311494..1312582 1 NC_005296.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1312582 aroC 2691420 aroC Rhodopseudomonas palustris CGA009 chorismate synthase NP_946552.1 1311494 D 258594 CDS NP_946553.1 39934277 2691421 1312686..1313885 1 NC_005296.1 adenylate/guanylate cyclase 1313885 2691421 RPA1202 Rhodopseudomonas palustris CGA009 adenylate/guanylate cyclase NP_946553.1 1312686 D 258594 CDS NP_946554.2 161610776 2691364 complement(1314063..1314374) 1 NC_005296.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor 1314374 clpS 2691364 clpS Rhodopseudomonas palustris CGA009 ATP-dependent Clp protease adaptor NP_946554.2 1314063 R 258594 CDS NP_946555.1 39934279 2688932 1314621..1315457 1 NC_005296.1 hypothetical protein 1315457 2688932 RPA1204 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946555.1 1314621 D 258594 CDS NP_946556.1 39934280 2688793 complement(1315582..1316733) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alcohol dehydrogenase 1316733 2688793 RPA1205 Rhodopseudomonas palustris CGA009 alcohol dehydrogenase NP_946556.1 1315582 R 258594 CDS NP_946557.1 39934281 2691493 complement(1316922..1318442) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; aldehyde dehydrogenase 1318442 2691493 RPA1206 Rhodopseudomonas palustris CGA009 aldehyde dehydrogenase NP_946557.1 1316922 R 258594 CDS NP_946558.1 39934282 2689150 1318680..1320569 1 NC_005296.1 sigma-54-dependent transcriptional regulator 1320569 2689150 RPA1207 Rhodopseudomonas palustris CGA009 sigma-54-dependent transcriptional regulator NP_946558.1 1318680 D 258594 CDS NP_946559.1 39934283 2688939 complement(1320610..1322013) 1 NC_005296.1 carotenoid oxygenase 1322013 2688939 RPA1208 Rhodopseudomonas palustris CGA009 carotenoid oxygenase NP_946559.1 1320610 R 258594 CDS NP_946560.1 39934284 2691419 complement(1322055..1323434) 1 NC_005296.1 hypothetical protein 1323434 2691419 RPA1209 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946560.1 1322055 R 258594 CDS NP_946561.1 39934285 2691494 complement(1323427..1324536) 1 NC_005296.1 hypothetical protein 1324536 2691494 RPA1210 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946561.1 1323427 R 258594 CDS NP_946562.1 39934286 2691490 complement(1324555..1325616) 1 NC_005296.1 hypothetical protein 1325616 2691490 RPA1211 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946562.1 1324555 R 258594 CDS NP_946563.1 39934287 2688865 complement(1325781..1326776) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alpha/beta hydrolase 1326776 2688865 RPA1212 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase NP_946563.1 1325781 R 258594 CDS NP_946564.1 39934288 2688966 complement(1326998..1328503) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1328503 2688966 RPA1213 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946564.1 1326998 R 258594 CDS NP_946565.1 39934289 2688989 complement(1328639..1330291) 1 NC_005296.1 ABC transporter ATP-binding protein 1330291 2688989 RPA1214 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946565.1 1328639 R 258594 CDS NP_946566.1 39934290 2688960 complement(1330400..1331290) 1 NC_005296.1 ABC transporter permease 1331290 2688960 RPA1215 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_946566.1 1330400 R 258594 CDS NP_946567.1 39934291 2691312 complement(1331304..1332245) 1 NC_005296.1 ABC transporter permease 1332245 2691312 RPA1216 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_946567.1 1331304 R 258594 CDS NP_946568.1 39934292 2691576 complement(1332410..1333540) 1 NC_005296.1 catalyzes the release of C-terminal glutamate residues from N-acylating moieties; carboxypeptidase 1333540 2691576 RPA1217 Rhodopseudomonas palustris CGA009 carboxypeptidase NP_946568.1 1332410 R 258594 CDS NP_946569.1 39934293 2691465 1333792..1335405 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter periplasmic protein 1335405 2691465 RPA1218 Rhodopseudomonas palustris CGA009 ABC transporter periplasmic protein NP_946569.1 1333792 D 258594 CDS NP_946570.1 39934294 2688886 complement(1335945..1336595) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1336595 2688886 RPA1219 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946570.1 1335945 R 258594 CDS NP_946571.1 39934295 2688990 1337065..1338081 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1338081 2688990 RPA1220 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946571.1 1337065 D 258594 CDS NP_946572.1 39934296 2691292 complement(1338132..1338923) 1 NC_005296.1 hypothetical protein 1338923 2691292 RPA1221 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946572.1 1338132 R 258594 CDS NP_946573.1 39934297 2691515 complement(1338952..1339974) 1 NC_005296.1 hypothetical protein 1339974 2691515 RPA1222 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946573.1 1338952 R 258594 CDS NP_946574.1 39934298 2691521 complement(1339991..1340314) 1 NC_005296.1 hypothetical protein 1340314 2691521 RPA1223 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946574.1 1339991 R 258594 CDS NP_946575.1 39934299 2691426 1340580..1342406 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; indolepyruvate ferredoxin oxidoreductase subunit alpha 1342406 iorA 2691426 iorA Rhodopseudomonas palustris CGA009 indolepyruvate ferredoxin oxidoreductase subunit alpha NP_946575.1 1340580 D 258594 CDS NP_946576.1 39934300 2689132 1342448..1343347 1 NC_005296.1 pyruvate ferredoxin/flavodoxin oxidoreductase 4Fe-4S binding subunit 1343347 2689132 RPA1225 Rhodopseudomonas palustris CGA009 pyruvate ferredoxin/flavodoxin oxidoreductase 4Fe-4S binding subunit NP_946576.1 1342448 D 258594 CDS NP_946577.1 39934301 2691349 1343344..1344507 1 NC_005296.1 Couples the complete acetyl-CoA oxidation to aromatic ring reduction by the use of the low-potential electron shuttle ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1344507 2691349 RPA1226 Rhodopseudomonas palustris CGA009 2-oxoglutarate ferredoxin oxidoreductase subunit alpha NP_946577.1 1343344 D 258594 CDS NP_946578.1 39934302 2691408 1344509..1345339 1 NC_005296.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1345339 oorB 2691408 oorB Rhodopseudomonas palustris CGA009 2-oxoglutarate ferredoxin oxidoreductase subunit beta NP_946578.1 1344509 D 258594 CDS NP_946579.1 39934303 2691567 1345354..1345914 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pyruvate ferredoxin/flavodoxin oxidoreductase 1345914 2691567 RPA1228 Rhodopseudomonas palustris CGA009 pyruvate ferredoxin/flavodoxin oxidoreductase NP_946579.1 1345354 D 258594 CDS NP_946580.1 39934304 2689129 1345938..1347272 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phenylacetate--CoA ligase 1347272 2689129 RPA1229 Rhodopseudomonas palustris CGA009 phenylacetate--CoA ligase NP_946580.1 1345938 D 258594 CDS NP_946581.1 39934305 2689143 1347482..1348354 1 NC_005296.1 ABC transporter permease 1348354 2689143 RPA1230 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_946581.1 1347482 D 258594 CDS NP_946582.1 39934306 2688856 1348357..1349502 1 NC_005296.1 ABC transporter permease 1349502 2688856 RPA1231 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_946582.1 1348357 D 258594 CDS NP_946583.1 39934307 2688962 1349499..1350260 1 NC_005296.1 branched-chain amino acid transport system ATP-binding protein 1350260 2688962 RPA1232 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_946583.1 1349499 D 258594 CDS NP_946584.1 39934308 2688914 1350264..1351013 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system ATP-binding protein 1351013 2688914 RPA1233 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_946584.1 1350264 D 258594 CDS NP_946585.1 39934309 2691315 1350997..1352697 1 NC_005296.1 long-chain-fatty-acid--CoA ligase 1352697 2691315 RPA1234 Rhodopseudomonas palustris CGA009 long-chain-fatty-acid--CoA ligase NP_946585.1 1350997 D 258594 CDS NP_946586.1 39934310 2691423 1352737..1353942 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; leucine-binding protein (LBP) 1353942 2691423 RPA1235 Rhodopseudomonas palustris CGA009 leucine-binding protein (LBP) NP_946586.1 1352737 D 258594 CDS NP_946587.1 39934311 2689123 complement(1354133..1355329) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 1355329 2689123 RPA1236 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_946587.1 1354133 R 258594 CDS NP_946588.1 39934312 2689144 complement(1355348..1356484) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 1356484 2689144 RPA1237 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_946588.1 1355348 R 258594 CDS NP_946589.1 39934313 2691570 complement(1356488..1357336) 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1357336 2691570 RPA1238 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_946589.1 1356488 R 258594 CDS NP_946590.1 39934314 2691503 1357474..1358460 1 NC_005296.1 biopolymer transport protein ExbB 1358460 exbB1 2691503 exbB1 Rhodopseudomonas palustris CGA009 biopolymer transport protein ExbB NP_946590.1 1357474 D 258594 CDS NP_946591.1 39934315 2691516 1358465..1358902 1 NC_005296.1 biopolymer transport protein ExbD 1358902 exbD1 2691516 exbD1 Rhodopseudomonas palustris CGA009 biopolymer transport protein ExbD NP_946591.1 1358465 D 258594 CDS NP_946592.1 39934316 2691596 1358899..1359771 1 NC_005296.1 tonB transport protein 1359771 2691596 RPA1241 Rhodopseudomonas palustris CGA009 tonB transport protein NP_946592.1 1358899 D 258594 CDS NP_946593.1 39934317 2691305 complement(1359791..1361302) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; AMP-dependent synthetase/ligase 1361302 fadD1 2691305 fadD1 Rhodopseudomonas palustris CGA009 AMP-dependent synthetase/ligase NP_946593.1 1359791 R 258594 CDS NP_946594.1 39934318 2688963 1361637..1362803 1 NC_005296.1 late embryogenesis abundant protein 1362803 2688963 RPA1243 Rhodopseudomonas palustris CGA009 late embryogenesis abundant protein NP_946594.1 1361637 D 258594 CDS NP_946595.1 39934319 2691551 1362819..1363424 1 NC_005296.1 hypothetical protein 1363424 2691551 RPA1244 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946595.1 1362819 D 258594 CDS NP_946596.1 39934320 2689075 1363411..1363803 1 NC_005296.1 hypothetical protein 1363803 2689075 RPA1245 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946596.1 1363411 D 258594 CDS NP_946597.1 39934321 2688964 1363800..1364501 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1364501 2688964 RPA1246 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946597.1 1363800 D 258594 CDS NP_946598.1 39934322 2691287 1364565..1365647 1 NC_005296.1 ribonuclease BN 1365647 rbn2 2691287 rbn2 Rhodopseudomonas palustris CGA009 ribonuclease BN NP_946598.1 1364565 D 258594 CDS NP_946599.1 39934323 2691288 complement(1365644..1366570) 1 NC_005296.1 LuxR family transcriptional regulator 1366570 2691288 RPA1248 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_946599.1 1365644 R 258594 CDS NP_946600.1 39934324 2691295 complement(1366560..1369928) 1 NC_005296.1 sensor histidine kinase 1369928 2691295 RPA1249 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_946600.1 1366560 R 258594 CDS NP_946601.1 39934325 2691430 1370185..1371447 1 NC_005296.1 amide-urea binding protein 1371447 2691430 RPA1250 Rhodopseudomonas palustris CGA009 amide-urea binding protein NP_946601.1 1370185 D 258594 CDS NP_946602.1 39934326 2691330 1371614..1372540 1 NC_005296.1 branched-chain amino acid transport system permease 1372540 2691330 RPA1251 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system permease NP_946602.1 1371614 D 258594 CDS NP_946603.1 39934327 2691428 1372555..1373706 1 NC_005296.1 high-affinity branched-chain amino acid transport system permease 1373706 2691428 RPA1252 Rhodopseudomonas palustris CGA009 high-affinity branched-chain amino acid transport system permease NP_946603.1 1372555 D 258594 CDS NP_946604.1 39934328 2691418 1373717..1374472 1 NC_005296.1 branched-chain amino acid transport system ATP-binding protein 1374472 2691418 RPA1253 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_946604.1 1373717 D 258594 CDS NP_946605.1 39934329 2691351 1374483..1375172 1 NC_005296.1 ABC transporter ATP-binding protein 1375172 2691351 RPA1254 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946605.1 1374483 D 258594 CDS NP_946606.1 39934330 2691387 1375209..1376438 1 NC_005296.1 formamide amidohydrolase 1376438 fmdA 2691387 fmdA Rhodopseudomonas palustris CGA009 formamide amidohydrolase NP_946606.1 1375209 D 258594 CDS NP_946607.1 39934331 2691580 1376627..1376971 1 NC_005296.1 formamidase regulatory protein FmdB 1376971 fmdB 2691580 fmdB Rhodopseudomonas palustris CGA009 formamidase regulatory protein FmdB NP_946607.1 1376627 D 258594 CDS NP_946608.1 39934332 2691314 complement(1377086..1377883) 1 NC_005296.1 cobalamin (5`-phosphate) synthase 1377883 cobS 2691314 cobS Rhodopseudomonas palustris CGA009 cobalamin (5`-phosphate) synthase NP_946608.1 1377086 R 258594 CDS NP_946609.1 39934333 2691578 1378063..1378485 1 NC_005296.1 hypothetical protein 1378485 2691578 RPA1258 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946609.1 1378063 D 258594 CDS NP_946610.1 39934334 2691391 1378745..1381489 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cation-transporting P-type ATPase 1381489 2691391 RPA1259 Rhodopseudomonas palustris CGA009 cation-transporting P-type ATPase NP_946610.1 1378745 D 258594 CDS NP_946611.1 39934335 2691581 1381578..1382483 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; universal stress protein 1382483 2691581 RPA1260 Rhodopseudomonas palustris CGA009 universal stress protein NP_946611.1 1381578 D 258594 CDS NP_946612.1 39934336 2691389 1382580..1384175 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FAD linked oxidase 1384175 2691389 RPA1261 Rhodopseudomonas palustris CGA009 FAD linked oxidase NP_946612.1 1382580 D 258594 CDS NP_946613.1 39934337 2688940 complement(1384147..1384611) 1 NC_005296.1 hypothetical protein 1384611 2688940 RPA1262 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946613.1 1384147 R 258594 CDS NP_946614.1 39934338 2688975 1384843..1385118 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1385118 2688975 RPA1263 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946614.1 1384843 D 258594 CDS NP_946615.2 161610775 2688817 1385318..1386934 1 NC_005296.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1386934 fliF 2688817 fliF Rhodopseudomonas palustris CGA009 flagellar MS-ring protein NP_946615.2 1385318 D 258594 CDS NP_946616.1 39934340 2688823 1386941..1388029 1 NC_005296.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 1388029 fliG 2688823 fliG Rhodopseudomonas palustris CGA009 flagellar motor switch protein G NP_946616.1 1386941 D 258594 CDS NP_946617.1 39934341 2688750 1388029..1388655 1 NC_005296.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 1388655 fliH 2688750 fliH Rhodopseudomonas palustris CGA009 flagellar assembly protein H NP_946617.1 1388029 D 258594 CDS NP_946618.1 39934342 2688906 1388673..1389020 1 NC_005296.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 1389020 fliY 2688906 fliY Rhodopseudomonas palustris CGA009 flagellar motor switch protein NP_946618.1 1388673 D 258594 CDS NP_946619.1 39934343 2688880 1389068..1390447 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Fis family transcriptional regulator 1390447 flbD 2688880 flbD Rhodopseudomonas palustris CGA009 Fis family transcriptional regulator NP_946619.1 1389068 D 258594 CDS NP_946620.1 39934344 2691333 complement(1390811..1390966) 1 NC_005296.1 hypothetical protein 1390966 2691333 RPA1269 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946620.1 1390811 R 258594 CDS NP_946621.1 39934345 2688956 complement(1391021..1391299) 1 NC_005296.1 hypothetical protein 1391299 2688956 RPA1270 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946621.1 1391021 R 258594 CDS NP_946622.1 39934346 2688810 complement(1391337..1391768) 1 NC_005296.1 hypothetical protein 1391768 2688810 RPA1271 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946622.1 1391337 R 258594 CDS NP_946623.1 39934347 2688812 1391835..1392662 1 NC_005296.1 transglutaminase 1392662 2688812 RPA1272 Rhodopseudomonas palustris CGA009 transglutaminase NP_946623.1 1391835 D 258594 CDS NP_946624.1 39934348 2689166 1392794..1393903 1 NC_005296.1 deoxyribonuclease 1393903 2689166 RPA1273 Rhodopseudomonas palustris CGA009 deoxyribonuclease NP_946624.1 1392794 D 258594 CDS NP_946625.1 39934349 2690574 1394619..1395500 1 NC_005296.1 Dps protein family starvation-inducible DNA-binding protein 1395500 2690574 RPA1274 Rhodopseudomonas palustris CGA009 Dps protein family starvation-inducible DNA-binding protein NP_946625.1 1394619 D 258594 CDS NP_946626.1 39934350 2691730 complement(1395763..1396287) 1 NC_005296.1 hypothetical protein 1396287 2691730 RPA1275 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946626.1 1395763 R 258594 CDS NP_946627.1 39934351 2692857 complement(1396520..1397713) 1 NC_005296.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1397713 carA 2692857 carA Rhodopseudomonas palustris CGA009 carbamoyl phosphate synthase small subunit NP_946627.1 1396520 R 258594 CDS NP_946628.1 39934352 2692670 1397862..1398566 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-ketoadipate enol-lactone hydrolase 1398566 2692670 RPA1277 Rhodopseudomonas palustris CGA009 beta-ketoadipate enol-lactone hydrolase NP_946628.1 1397862 D 258594 CDS NP_946629.1 39934353 2689550 1398724..1399179 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1399179 2689550 RPA1278 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946629.1 1398724 D 258594 CDS NP_946630.1 39934354 2689749 complement(1399267..1399575) 1 NC_005296.1 hypothetical protein 1399575 2689749 RPA1279 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946630.1 1399267 R 258594 CDS NP_946631.1 39934355 2692985 1399766..1400614 1 NC_005296.1 hypothetical protein 1400614 2692985 RPA1280 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946631.1 1399766 D 258594 CDS NP_946632.1 39934356 2691404 complement(1400728..1401201) 1 NC_005296.1 hypothetical protein 1401201 2691404 RPA1281 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946632.1 1400728 R 258594 CDS NP_946633.1 39934357 2693065 complement(1401194..1401508) 1 NC_005296.1 ArsR family transcriptional regulator 1401508 2693065 RPA1282 Rhodopseudomonas palustris CGA009 ArsR family transcriptional regulator NP_946633.1 1401194 R 258594 CDS NP_946634.1 39934358 2693073 1401637..1402254 1 NC_005296.1 homoserine/homoserine lactone/threonine efflux protein 1402254 2693073 RPA1283 Rhodopseudomonas palustris CGA009 homoserine/homoserine lactone/threonine efflux protein NP_946634.1 1401637 D 258594 CDS NP_946635.1 39934359 2692953 complement(1402378..1403175) 1 NC_005296.1 N-formylglutamate amidohydrolase 1403175 2692953 RPA1284 Rhodopseudomonas palustris CGA009 N-formylglutamate amidohydrolase NP_946635.1 1402378 R 258594 CDS NP_946636.1 39934360 2689938 1403337..1403744 1 NC_005296.1 hypothetical protein 1403744 2689938 RPA1285 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946636.1 1403337 D 258594 CDS NP_946637.1 39934361 2692911 complement(1403761..1404003) 1 NC_005296.1 hypothetical protein 1404003 2692911 RPA1286 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946637.1 1403761 R 258594 CDS NP_946638.1 39934362 2692756 1404459..1406468 1 NC_005296.1 synthesizes RNA primers at the replication forks; DNA primase 1406468 dnaG 2692756 dnaG Rhodopseudomonas palustris CGA009 DNA primase NP_946638.1 1404459 D 258594 CDS NP_946639.1 39934363 2691471 1406728..1408824 1 NC_005296.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 1408824 rpoD 2691471 rpoD Rhodopseudomonas palustris CGA009 RNA polymerase sigma factor RpoD NP_946639.1 1406728 D 258594 CDS NP_946640.1 39934364 2691338 1408843..1409175 1 NC_005296.1 hypothetical protein 1409175 2691338 RPA1289 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946640.1 1408843 D 258594 CDS NP_946641.1 39934365 2689739 complement(1409572..1409895) 1 NC_005296.1 plasmid maintenance system antidote protein 1409895 2689739 RPA1290 Rhodopseudomonas palustris CGA009 plasmid maintenance system antidote protein NP_946641.1 1409572 R 258594 CDS NP_946642.1 39934366 2689744 complement(1409905..1410195) 1 NC_005296.1 proteic killer suppression protein 1410195 2689744 RPA1291 Rhodopseudomonas palustris CGA009 proteic killer suppression protein NP_946642.1 1409905 R 258594 CDS NP_946643.1 39934367 2693046 complement(1410470..1410664) 1 NC_005296.1 hypothetical protein 1410664 2693046 RPA1292 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946643.1 1410470 R 258594 CDS NP_946644.1 39934368 2692997 complement(1410628..1411431) 1 NC_005296.1 IS5 transposase 1411431 2692997 RPA1293 Rhodopseudomonas palustris CGA009 IS5 transposase NP_946644.1 1410628 R 258594 CDS NP_946645.1 39934369 2691396 1411896..1413359 1 NC_005296.1 hypothetical protein 1413359 2691396 RPA1294 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946645.1 1411896 D 258594 CDS NP_946646.1 39934370 2692882 1413532..1414743 1 NC_005296.1 signal transduction histidine kinase 1414743 2692882 RPA1295 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_946646.1 1413532 D 258594 CDS NP_946647.1 39934371 2692939 1414958..1416721 1 NC_005296.1 diguanylate cyclase 1416721 2692939 RPA1296 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_946647.1 1414958 D 258594 CDS NP_946648.1 39934372 2692949 complement(1416913..1417764) 1 NC_005296.1 Short-chain dehydrogenase/reductase SDR:glucose/ribitol dehydrogenase 1417764 2692949 RPA1297 Rhodopseudomonas palustris CGA009 Short-chain dehydrogenase/reductase SDR:glucose/ribitol dehydrogenase NP_946648.1 1416913 R 258594 CDS NP_946649.1 39934373 2692908 complement(1417955..1419070) 1 NC_005296.1 catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1419070 2692908 RPA1298 Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP synthase NP_946649.1 1417955 R 258594 CDS NP_946650.1 39934374 2689708 1419368..1419715 1 NC_005296.1 hypothetical protein 1419715 2689708 RPA1299 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946650.1 1419368 D 258594 CDS NP_946651.1 39934375 2689547 1419941..1420894 1 NC_005296.1 restriction system protein 1420894 2689547 RPA1300 Rhodopseudomonas palustris CGA009 restriction system protein NP_946651.1 1419941 D 258594 CDS NP_946652.1 39934376 2693470 1421072..1421635 1 NC_005296.1 intracellular protease 1421635 pfpI 2693470 pfpI Rhodopseudomonas palustris CGA009 intracellular protease NP_946652.1 1421072 D 258594 CDS NP_946653.1 39934377 2693546 complement(1421829..1422200) 1 NC_005296.1 hypothetical protein 1422200 2693546 RPA1302 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946653.1 1421829 R 258594 CDS NP_946654.1 39934378 2693266 1422427..1423245 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; lytic murein transglycosylase 1423245 2693266 RPA1303 Rhodopseudomonas palustris CGA009 lytic murein transglycosylase NP_946654.1 1422427 D 258594 CDS NP_946655.1 39934379 2693198 complement(1423276..1423989) 1 NC_005296.1 flagellar hook capping protein 1423989 2693198 RPA1304 Rhodopseudomonas palustris CGA009 flagellar hook capping protein NP_946655.1 1423276 R 258594 CDS NP_946656.1 39934380 2693222 complement(1424002..1425594) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; flagellar hook-length control protein 1425594 2693222 RPA1305 Rhodopseudomonas palustris CGA009 flagellar hook-length control protein NP_946656.1 1424002 R 258594 CDS NP_946657.1 39934381 2693158 1425895..1427100 1 NC_005296.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1427100 mnmA 2693158 mnmA Rhodopseudomonas palustris CGA009 tRNA-specific 2-thiouridylase MnmA NP_946657.1 1425895 D 258594 CDS NP_946658.1 39934382 2693399 1427120..1427758 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphatidylethanolamine N-methyltransferase 1427758 2693399 RPA1307 Rhodopseudomonas palustris CGA009 phosphatidylethanolamine N-methyltransferase NP_946658.1 1427120 D 258594 CDS NP_946659.1 39934383 2693345 complement(1428428..1428691) 1 NC_005296.1 hypothetical protein 1428691 2693345 RPA1308 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946659.1 1428428 R 258594 CDS NP_946660.1 39934384 2693337 1429578..1429871 1 NC_005296.1 transposase 1429871 2693337 RPA1309 Rhodopseudomonas palustris CGA009 transposase NP_946660.1 1429578 D 258594 CDS NP_946661.1 39934385 2693265 1430328..1431443 1 NC_005296.1 NADH:flavin oxidoreductase 1431443 2693265 RPA1310 Rhodopseudomonas palustris CGA009 NADH:flavin oxidoreductase NP_946661.1 1430328 D 258594 CDS NP_946662.1 39934386 2693184 1431728..1432060 1 NC_005296.1 4-carboxymuconolactone decarboxylase 1432060 2693184 RPA1311 Rhodopseudomonas palustris CGA009 4-carboxymuconolactone decarboxylase NP_946662.1 1431728 D 258594 CDS NP_946663.1 39934387 2693217 1432289..1432831 1 NC_005296.1 hypothetical protein 1432831 2693217 RPA1312 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946663.1 1432289 D 258594 CDS NP_946664.1 39934388 2693389 1433238..1435136 1 NC_005296.1 sensor histidine kinase 1435136 2693389 RPA1313 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_946664.1 1433238 D 258594 CDS NP_946665.1 39934389 2693545 1435192..1435623 1 NC_005296.1 chemotaxis protein CheY 1435623 2693545 RPA1314 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_946665.1 1435192 D 258594 CDS NP_946666.1 39934390 2693585 1435620..1436306 1 NC_005296.1 LuxR family transcriptional regulator 1436306 2693585 RPA1315 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_946666.1 1435620 D 258594 CDS NP_946667.1 39934391 2693593 complement(1436415..1436669) 1 NC_005296.1 hypothetical protein 1436669 2693593 RPA1316 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946667.1 1436415 R 258594 CDS NP_946668.1 39934392 2693262 1437556..1438581 1 NC_005296.1 cytochrome bd-I oxidase subunit II 1438581 cioB 2693262 cioB Rhodopseudomonas palustris CGA009 cytochrome bd-I oxidase subunit II NP_946668.1 1437556 D 258594 CDS NP_946669.1 39934393 2693302 1438689..1438997 1 NC_005296.1 hypothetical protein 1438997 2693302 RPA1320 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946669.1 1438689 D 258594 CDS NP_946670.1 39934394 2693598 1439181..1440020 1 NC_005296.1 AraC family transcriptional regulator 1440020 2693598 RPA1321 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_946670.1 1439181 D 258594 CDS NP_946671.1 39934395 2693410 1440217..1440915 1 NC_005296.1 signal transduction histidine kinase 1440915 2693410 RPA1322 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_946671.1 1440217 D 258594 CDS NP_946672.1 39934396 2693591 complement(1441280..1441510) 1 NC_005296.1 hypothetical protein 1441510 2693591 RPA1323 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946672.1 1441280 R 258594 CDS NP_946673.1 39934397 2693579 1441783..1443834 1 NC_005296.1 FusB/FusC fusaric acid resistance pump 1443834 2693579 RPA1324 Rhodopseudomonas palustris CGA009 FusB/FusC fusaric acid resistance pump NP_946673.1 1441783 D 258594 CDS NP_946674.1 39934398 2693376 1443848..1444054 1 NC_005296.1 hypothetical protein 1444054 2693376 RPA1324a Rhodopseudomonas palustris CGA009 hypothetical protein NP_946674.1 1443848 D 258594 CDS NP_946675.1 39934399 2693375 1444051..1444992 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FusE-MFP/HlyD family membrane fusion protein 1444992 2693375 RPA1325 Rhodopseudomonas palustris CGA009 FusE-MFP/HlyD family membrane fusion protein NP_946675.1 1444051 D 258594 CDS NP_946676.1 39934400 2693461 complement(1445131..1446114) 1 NC_005296.1 AraC family transcriptional regulator 1446114 2693461 RPA1326 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_946676.1 1445131 R 258594 CDS NP_946677.1 39934401 2693457 1446214..1447170 1 NC_005296.1 Ser/Thr protein kinase 1447170 2693457 RPA1327 Rhodopseudomonas palustris CGA009 Ser/Thr protein kinase NP_946677.1 1446214 D 258594 CDS NP_946678.1 39934402 2693544 1447208..1451350 1 NC_005296.1 sensor histidine kinase 1451350 2693544 RPA1328 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_946678.1 1447208 D 258594 CDS NP_946679.1 39934403 2693518 1451481..1452938 1 NC_005296.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1452938 fumC 2693518 fumC Rhodopseudomonas palustris CGA009 fumarate hydratase NP_946679.1 1451481 D 258594 CDS NP_946680.1 39934404 2693513 1452940..1454220 1 NC_005296.1 hypothetical protein 1454220 2693513 RPA1330 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946680.1 1452940 D 258594 CDS NP_946681.1 39934405 2693488 1454615..1456108 1 NC_005296.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 1456108 mqoB 2693488 mqoB Rhodopseudomonas palustris CGA009 malate:quinone oxidoreductase NP_946681.1 1454615 D 258594 CDS NP_946682.1 39934406 2693484 1456158..1457000 1 NC_005296.1 phage integrase/recombinase 1457000 2693484 RPA1332 Rhodopseudomonas palustris CGA009 phage integrase/recombinase NP_946682.1 1456158 D 258594 CDS NP_946683.1 39934407 2693446 1457225..1457881 1 NC_005296.1 hypothetical protein 1457881 2693446 RPA1333 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946683.1 1457225 D 258594 CDS NP_946684.1 39934408 2693538 1457878..1458423 1 NC_005296.1 RNA polymerase ECF-type sigma factor FecI 1458423 2693538 RPA1334 Rhodopseudomonas palustris CGA009 RNA polymerase ECF-type sigma factor FecI NP_946684.1 1457878 D 258594 CDS NP_946685.1 39934409 2693534 1458444..1459430 1 NC_005296.1 iron siderophore sensor protein FecR 1459430 2693534 RPA1335 Rhodopseudomonas palustris CGA009 iron siderophore sensor protein FecR NP_946685.1 1458444 D 258594 CDS NP_946686.1 39934410 2693367 1459664..1469554 1 NC_005296.1 hypothetical protein 1469554 2693367 RPA1336 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946686.1 1459664 D 258594 CDS NP_946687.1 39934411 2693355 1469449..1471704 1 NC_005296.1 hypothetical protein 1471704 2693355 RPA1337 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946687.1 1469449 D 258594 CDS NP_946688.1 39934412 2693420 1472806..1473558 1 NC_005296.1 hypothetical protein 1473558 2693420 RPA1338 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946688.1 1472806 D 258594 CDS NP_946689.1 39934413 2693613 1473555..1474103 1 NC_005296.1 RNA polymerase ECF-type sigma factor FecI 1474103 2693613 RPA1339 Rhodopseudomonas palustris CGA009 RNA polymerase ECF-type sigma factor FecI NP_946689.1 1473555 D 258594 CDS NP_946690.1 39934414 2693331 1474165..1475148 1 NC_005296.1 iron siderophore sensor protein FecR 1475148 2693331 RPA1340 Rhodopseudomonas palustris CGA009 iron siderophore sensor protein FecR NP_946690.1 1474165 D 258594 CDS NP_946691.1 39934415 2693271 1475303..1488310 1 NC_005296.1 hypothetical protein 1488310 2693271 RPA1341 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946691.1 1475303 D 258594 CDS NP_946692.1 39934416 2693270 complement(1488669..1488935) 1 NC_005296.1 hypothetical protein 1488935 2693270 RPA1342 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946692.1 1488669 R 258594 CDS NP_946693.1 39934417 2693287 1489054..1489806 1 NC_005296.1 hypothetical protein 1489806 2693287 RPA1343 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946693.1 1489054 D 258594 CDS NP_946694.1 39934418 2693290 1489856..1490317 1 NC_005296.1 hypothetical protein 1490317 2693290 RPA1344 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946694.1 1489856 D 258594 CDS NP_946695.1 39934419 2693342 1490469..1491218 1 NC_005296.1 hypothetical protein 1491218 2693342 RPA1345 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946695.1 1490469 D 258594 CDS NP_946696.1 39934420 2693341 1491235..1491948 1 NC_005296.1 TonB protein colicin J receptor 1491948 2693341 RPA1346 Rhodopseudomonas palustris CGA009 TonB protein colicin J receptor NP_946696.1 1491235 D 258594 CDS NP_946697.1 39934421 2693200 1492084..1492635 1 NC_005296.1 RNA polymerase ECF-type sigma factor FecI 1492635 2693200 RPA1347 Rhodopseudomonas palustris CGA009 RNA polymerase ECF-type sigma factor FecI NP_946697.1 1492084 D 258594 CDS NP_946698.1 39934422 2693317 1492975..1493943 1 NC_005296.1 iron siderophore sensor protein FecR 1493943 fecR3 2693317 fecR3 Rhodopseudomonas palustris CGA009 iron siderophore sensor protein FecR NP_946698.1 1492975 D 258594 CDS NP_946699.1 39934423 2693550 1494203..1495957 1 NC_005296.1 hemolysin activation/secretion protein 1495957 2693550 RPA1349 Rhodopseudomonas palustris CGA009 hemolysin activation/secretion protein NP_946699.1 1494203 D 258594 CDS NP_946700.1 39934424 2693462 1495957..1497984 1 NC_005296.1 transport protein ExbB2 1497984 exbB2 2693462 exbB2 Rhodopseudomonas palustris CGA009 transport protein ExbB2 NP_946700.1 1495957 D 258594 CDS NP_946701.1 39934425 2693562 1497989..1498393 1 NC_005296.1 transport protein ExbD 1498393 exbD2 2693562 exbD2 Rhodopseudomonas palustris CGA009 transport protein ExbD NP_946701.1 1497989 D 258594 CDS NP_946702.1 39934426 2693452 1498390..1498887 1 NC_005296.1 hypothetical protein 1498887 2693452 RPA1352 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946702.1 1498390 D 258594 CDS NP_946703.1 39934427 2693473 1498884..1499624 1 NC_005296.1 hypothetical protein 1499624 2693473 RPA1353 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946703.1 1498884 D 258594 CDS NP_946704.1 39934428 2693436 1499664..1501541 1 NC_005296.1 hypothetical protein 1501541 2693436 RPA1354 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946704.1 1499664 D 258594 CDS NP_946705.1 39934429 2693402 1501544..1502137 1 NC_005296.1 hypothetical protein 1502137 2693402 RPA1355 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946705.1 1501544 D 258594 CDS NP_946706.1 39934430 2693286 1502134..1503177 1 NC_005296.1 PpiC-type peptidyl-prolyl cis-trans isomerase 1503177 2693286 RPA1356 Rhodopseudomonas palustris CGA009 PpiC-type peptidyl-prolyl cis-trans isomerase NP_946706.1 1502134 D 258594 CDS NP_946707.1 39934431 2693590 1503219..1503734 1 NC_005296.1 hypothetical protein 1503734 2693590 RPA1357 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946707.1 1503219 D 258594 CDS NP_946708.1 39934432 2693344 1503755..1504246 1 NC_005296.1 hypothetical protein 1504246 2693344 RPA1358 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946708.1 1503755 D 258594 CDS NP_946709.1 39934433 2693584 1504243..1505148 1 NC_005296.1 transglycosylase 1505148 2693584 RPA1359 Rhodopseudomonas palustris CGA009 transglycosylase NP_946709.1 1504243 D 258594 CDS NP_946710.1 39934434 2693283 1505154..1505711 1 NC_005296.1 hypothetical protein 1505711 2693283 RPA1360 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946710.1 1505154 D 258594 CDS NP_946711.1 39934435 2693332 complement(1505812..1505994) 1 NC_005296.1 hypothetical protein 1505994 2693332 RPA1361 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946711.1 1505812 R 258594 CDS NP_946712.1 39934436 2693275 1506856..1507920 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sulfate ester transport system substrate-binding protein 1507920 2693275 RPA1362 Rhodopseudomonas palustris CGA009 sulfate ester transport system substrate-binding protein NP_946712.1 1506856 D 258594 CDS NP_946713.1 39934437 2693253 1507917..1509533 1 NC_005296.1 sulfate ester transport system permease 1509533 2693253 RPA1363 Rhodopseudomonas palustris CGA009 sulfate ester transport system permease NP_946713.1 1507917 D 258594 CDS NP_946714.1 39934438 2693479 1509530..1510339 1 NC_005296.1 sulfate ester transport system ATP-binding protein 1510339 2693479 RPA1364 Rhodopseudomonas palustris CGA009 sulfate ester transport system ATP-binding protein NP_946714.1 1509530 D 258594 CDS NP_946715.1 39934439 2693469 1510381..1512045 1 NC_005296.1 sulfatase 1512045 2693469 RPA1365 Rhodopseudomonas palustris CGA009 sulfatase NP_946715.1 1510381 D 258594 CDS NP_946716.1 39934440 2693308 complement(1512100..1512435) 1 NC_005296.1 sulfur oxidation protein 1512435 soxZ1 2693308 soxZ1 Rhodopseudomonas palustris CGA009 sulfur oxidation protein NP_946716.1 1512100 R 258594 CDS NP_946717.1 39934441 2693300 complement(1512432..1512902) 1 NC_005296.1 with SoxZ catalyzes the oxidation of sulfur compounds; sulfur oxidation protein SoxY 1512902 soxY1 2693300 soxY1 Rhodopseudomonas palustris CGA009 sulfur oxidation protein SoxY NP_946717.1 1512432 R 258594 CDS NP_946718.1 39934442 2693588 1513015..1513605 1 NC_005296.1 hypothetical protein 1513605 2693588 RPA1368 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946718.1 1513015 D 258594 CDS NP_946719.1 39934443 2693303 1513712..1514713 1 NC_005296.1 hypothetical protein 1514713 2693303 RPA1369 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946719.1 1513712 D 258594 CDS NP_946720.1 39934444 2693394 complement(1515576..1516643) 1 NC_005296.1 nitrogen-fixing NifU C-terminal 1516643 2693394 RPA1370 Rhodopseudomonas palustris CGA009 nitrogen-fixing NifU C-terminal NP_946720.1 1515576 R 258594 CDS NP_946721.1 39934445 2693335 complement(1516647..1517132) 1 NC_005296.1 vanadium nitrogenase protein 1517132 vnfX 2693335 vnfX Rhodopseudomonas palustris CGA009 vanadium nitrogenase protein NP_946721.1 1516647 R 258594 CDS NP_946722.1 39934446 2693523 complement(1517129..1518511) 1 NC_005296.1 nitrogenase cofactor synthesis protein 1518511 vnfN 2693523 vnfN Rhodopseudomonas palustris CGA009 nitrogenase cofactor synthesis protein NP_946722.1 1517129 R 258594 CDS NP_946723.1 39934447 2693616 complement(1518523..1519905) 1 NC_005296.1 nitrogenase cofactor synthesis protein 1519905 vnfE 2693616 vnfE Rhodopseudomonas palustris CGA009 nitrogenase cofactor synthesis protein NP_946723.1 1518523 R 258594 CDS NP_946724.1 39934448 2693315 1520222..1521856 1 NC_005296.1 Fis family transcriptional regulator 1521856 vnfA 2693315 vnfA Rhodopseudomonas palustris CGA009 Fis family transcriptional regulator NP_946724.1 1520222 D 258594 CDS NP_946725.1 39934449 2693549 1521861..1522259 1 NC_005296.1 hypothetical protein 1522259 2693549 RPA1375 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946725.1 1521861 D 258594 CDS NP_946726.1 39934450 2693267 complement(1522488..1523378) 1 NC_005296.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 1523378 nifH 2693267 nifH Rhodopseudomonas palustris CGA009 nitrogenase reductase NP_946726.1 1522488 R 258594 CDS NP_946727.1 39934451 2693438 complement(1523442..1524245) 1 NC_005296.1 glyoxalase 1524245 2693438 RPA1377 Rhodopseudomonas palustris CGA009 glyoxalase NP_946727.1 1523442 R 258594 CDS NP_946728.1 39934452 2693443 1524697..1526115 1 NC_005296.1 nitrogenase vanadium-iron protein subunit alpha 1526115 vnfD 2693443 vnfD Rhodopseudomonas palustris CGA009 nitrogenase vanadium-iron protein subunit alpha NP_946728.1 1524697 D 258594 CDS NP_946729.1 39934453 2693615 1526112..1526453 1 NC_005296.1 vanadium dinitrogenase subunit delta 1526453 vnfG 2693615 vnfG Rhodopseudomonas palustris CGA009 vanadium dinitrogenase subunit delta NP_946729.1 1526112 D 258594 CDS NP_946730.1 39934454 2693460 1526517..1527905 1 NC_005296.1 nitrogenase vanadium-iron protein subunit VnfK 1527905 vnfK 2693460 vnfK Rhodopseudomonas palustris CGA009 nitrogenase vanadium-iron protein subunit VnfK NP_946730.1 1526517 D 258594 CDS NP_946731.1 39934455 2693571 1527884..1528840 1 NC_005296.1 hypothetical protein 1528840 2693571 RPA1381 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946731.1 1527884 D 258594 CDS NP_946732.1 39934456 2693548 1528871..1529356 1 NC_005296.1 nitrogen fixation-like protein 1529356 2693548 RPA1382 Rhodopseudomonas palustris CGA009 nitrogen fixation-like protein NP_946732.1 1528871 D 258594 CDS NP_946733.1 39934457 2693397 1529451..1529894 1 NC_005296.1 ModE family transcriptional regulator 1529894 2693397 RPA1383 Rhodopseudomonas palustris CGA009 ModE family transcriptional regulator NP_946733.1 1529451 D 258594 CDS NP_946734.1 39934458 2693419 complement(1529885..1530706) 1 NC_005296.1 phosphate ABC transporter permease 1530706 ptxC 2693419 ptxC Rhodopseudomonas palustris CGA009 phosphate ABC transporter permease NP_946734.1 1529885 R 258594 CDS NP_946735.1 39934459 2693396 complement(1530703..1531593) 1 NC_005296.1 phosphonate transport system substrate-binding protein 1531593 ptxB 2693396 ptxB Rhodopseudomonas palustris CGA009 phosphonate transport system substrate-binding protein NP_946735.1 1530703 R 258594 CDS NP_946736.1 39934460 2693264 complement(1531578..1532432) 1 NC_005296.1 phosphonate ABC transporter ATP-binding protein 1532432 ptxA 2693264 ptxA Rhodopseudomonas palustris CGA009 phosphonate ABC transporter ATP-binding protein NP_946736.1 1531578 R 258594 CDS NP_946737.1 39934461 2693486 complement(1532499..1533827) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1533827 2693486 RPA1387 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946737.1 1532499 R 258594 CDS NP_946738.1 39934462 2693595 1534069..1535079 1 NC_005296.1 hypothetical protein 1535079 2693595 RPA1388 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946738.1 1534069 D 258594 CDS NP_946739.1 39934463 2693447 1535067..1536164 1 NC_005296.1 hypothetical protein 1536164 2693447 RPA1389 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946739.1 1535067 D 258594 CDS NP_946740.1 39934464 2693189 1536155..1536853 1 NC_005296.1 hypothetical protein 1536853 2693189 RPA1390 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946740.1 1536155 D 258594 CDS NP_946741.1 39934465 2693432 1536850..1537893 1 NC_005296.1 ABC transporter ATP-binding protein 1537893 2693432 RPA1391 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946741.1 1536850 D 258594 CDS NP_946742.1 39934466 2693176 1537893..1538441 1 NC_005296.1 nitroreductase family proteins 1538441 2693176 RPA1392 Rhodopseudomonas palustris CGA009 nitroreductase family proteins NP_946742.1 1537893 D 258594 CDS NP_946743.1 39934467 2693620 1538532..1539338 1 NC_005296.1 hypothetical protein 1539338 2693620 RPA1393 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946743.1 1538532 D 258594 CDS NP_946744.1 39934468 2693178 complement(1539494..1540996) 1 NC_005296.1 transcriptional regulator 1540996 2693178 RPA1394 Rhodopseudomonas palustris CGA009 transcriptional regulator NP_946744.1 1539494 R 258594 CDS NP_946745.1 39934469 2693575 1541222..1542790 1 NC_005296.1 trehalose/maltose binding protein 1542790 2693575 RPA1395 Rhodopseudomonas palustris CGA009 trehalose/maltose binding protein NP_946745.1 1541222 D 258594 CDS NP_946746.1 39934470 2693586 1542824..1543879 1 NC_005296.1 sugar ABC transporter permease 1543879 2693586 RPA1396 Rhodopseudomonas palustris CGA009 sugar ABC transporter permease NP_946746.1 1542824 D 258594 CDS NP_946747.1 39934471 2693482 1543879..1544739 1 NC_005296.1 sugar ABC transporter permease 1544739 2693482 RPA1397 Rhodopseudomonas palustris CGA009 sugar ABC transporter permease NP_946747.1 1543879 D 258594 CDS NP_946748.1 39934472 2693393 1544736..1545839 1 NC_005296.1 sugar ABC transporter ATP-binding protein 1545839 2693393 RPA1398 Rhodopseudomonas palustris CGA009 sugar ABC transporter ATP-binding protein NP_946748.1 1544736 D 258594 CDS NP_946749.1 39934473 2693357 1545836..1546921 1 NC_005296.1 transport system ATP-binding protein 1546921 2693357 RPA1399 Rhodopseudomonas palustris CGA009 transport system ATP-binding protein NP_946749.1 1545836 D 258594 CDS NP_946750.1 39934474 2693347 1546928..1547713 1 NC_005296.1 glutamine amidotransferase 1547713 2693347 RPA1400 Rhodopseudomonas palustris CGA009 glutamine amidotransferase NP_946750.1 1546928 D 258594 CDS NP_946751.1 39934475 2693277 1547728..1549113 1 NC_005296.1 glutamine synthetase 1549113 glnAIII 2693277 glnAIII Rhodopseudomonas palustris CGA009 glutamine synthetase NP_946751.1 1547728 D 258594 CDS NP_946752.1 39934476 2693156 1549121..1550575 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Glu-tRNA amidotransferase subunit A 1550575 2693156 RPA1402 Rhodopseudomonas palustris CGA009 Glu-tRNA amidotransferase subunit A NP_946752.1 1549121 D 258594 CDS NP_946753.1 39934477 2693421 1550579..1551406 1 NC_005296.1 glutamine amidotransferase 1551406 2693421 RPA1403 Rhodopseudomonas palustris CGA009 glutamine amidotransferase NP_946753.1 1550579 D 258594 CDS NP_946754.1 39934478 2693408 complement(1551670..1553496) 1 NC_005296.1 catalyzes the hydrolysis of allophanate; allophanate hydrolase 1553496 2693408 RPA1404 Rhodopseudomonas palustris CGA009 allophanate hydrolase NP_946754.1 1551670 R 258594 CDS NP_946755.1 39934479 2693349 complement(1553493..1557041) 1 NC_005296.1 urea amidolyase 1557041 2693349 RPA1405 Rhodopseudomonas palustris CGA009 urea amidolyase NP_946755.1 1553493 R 258594 CDS NP_946756.1 39934480 2693587 complement(1557044..1557679) 1 NC_005296.1 hypothetical protein 1557679 2693587 RPA1406 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946756.1 1557044 R 258594 CDS NP_946757.1 39934481 2690097 complement(1557682..1558521) 1 NC_005296.1 hypothetical protein 1558521 2690097 RPA1407 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946757.1 1557682 R 258594 CDS NP_946758.1 39934482 2691845 complement(1558560..1559351) 1 NC_005296.1 ABC transporter 1559351 2691845 RPA1408 Rhodopseudomonas palustris CGA009 ABC transporter NP_946758.1 1558560 R 258594 CDS NP_946759.1 39934483 2689774 complement(1559348..1560166) 1 NC_005296.1 taurine transport system permease 1560166 2689774 RPA1409 Rhodopseudomonas palustris CGA009 taurine transport system permease NP_946759.1 1559348 R 258594 CDS NP_946760.1 39934484 2689756 complement(1560201..1561271) 1 NC_005296.1 taurine transport system protein 1561271 2689756 RPA1410 Rhodopseudomonas palustris CGA009 taurine transport system protein NP_946760.1 1560201 R 258594 CDS NP_946761.1 39934485 2689747 complement(1561646..1562437) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; enoyl-CoA hydratase 1562437 2689747 RPA1411 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_946761.1 1561646 R 258594 CDS NP_946762.1 39934486 2689724 1562558..1564117 1 NC_005296.1 fatty-acid--CoA ligase 1564117 2689724 RPA1412 Rhodopseudomonas palustris CGA009 fatty-acid--CoA ligase NP_946762.1 1562558 D 258594 CDS NP_946763.1 39934487 2689713 complement(1564275..1565213) 1 NC_005296.1 IclR family transcriptional regulator 1565213 2689713 RPA1413 Rhodopseudomonas palustris CGA009 IclR family transcriptional regulator NP_946763.1 1564275 R 258594 CDS NP_946764.1 39934488 2689846 1565333..1566193 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl dehydratase 1566193 2689846 RPA1414 Rhodopseudomonas palustris CGA009 acyl dehydratase NP_946764.1 1565333 D 258594 CDS NP_946765.1 39934489 2691775 1566319..1567563 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino-acid ABC transporter substrate-binding protein 1567563 2691775 RPA1415 Rhodopseudomonas palustris CGA009 branched chain amino-acid ABC transporter substrate-binding protein NP_946765.1 1566319 D 258594 CDS NP_946766.1 39934490 2689571 1567571..1568290 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system ATP-binding protein 1568290 2689571 RPA1416 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_946766.1 1567571 D 258594 CDS NP_946767.1 39934491 2691743 1568283..1568987 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system ATP-binding protein 1568987 2691743 RPA1417 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_946767.1 1568283 D 258594 CDS NP_946768.1 39934492 2689540 1569001..1569864 1 NC_005296.1 transport system permease 1569864 2689540 RPA1418 Rhodopseudomonas palustris CGA009 transport system permease NP_946768.1 1569001 D 258594 CDS NP_946769.1 39934493 2689387 1569861..1570871 1 NC_005296.1 transport system permease 1570871 2689387 RPA1419 Rhodopseudomonas palustris CGA009 transport system permease NP_946769.1 1569861 D 258594 CDS NP_946770.1 39934494 2690303 complement(1570899..1574057) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; heavy metal efflux pump CzcA 1574057 ybdE 2690303 ybdE Rhodopseudomonas palustris CGA009 heavy metal efflux pump CzcA NP_946770.1 1570899 R 258594 CDS NP_946771.1 39934495 2691410 complement(1574054..1575457) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; efflux protein 1575457 2691410 RPA1421 Rhodopseudomonas palustris CGA009 efflux protein NP_946771.1 1574054 R 258594 CDS NP_946772.1 39934496 2691407 complement(1575534..1575932) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1575932 2691407 RPA1422 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946772.1 1575534 R 258594 CDS NP_946773.1 39934497 2689891 1576971..1577915 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1577915 2689891 RPA1423 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946773.1 1576971 D 258594 CDS NP_946774.1 39934498 2690286 1577902..1579875 1 NC_005296.1 selenocysteine lyase 1579875 2690286 RPA1424 Rhodopseudomonas palustris CGA009 selenocysteine lyase NP_946774.1 1577902 D 258594 CDS NP_946775.1 39934499 2693093 1580040..1580987 1 NC_005296.1 serine acetyltransferase 1580987 cysE1 2693093 cysE1 Rhodopseudomonas palustris CGA009 serine acetyltransferase NP_946775.1 1580040 D 258594 CDS NP_946776.1 39934500 2691224 1581162..1582283 1 NC_005296.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 1582283 metN 2691224 metN Rhodopseudomonas palustris CGA009 DL-methionine transporter ATP-binding subunit NP_946776.1 1581162 D 258594 CDS NP_946777.1 39934501 2693048 1582273..1582941 1 NC_005296.1 ABC transporter permease 1582941 2693048 RPA1427 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_946777.1 1582273 D 258594 CDS NP_946778.1 39934502 2693022 1582970..1583743 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; lipoprotein 1583743 2693022 RPA1428 Rhodopseudomonas palustris CGA009 lipoprotein NP_946778.1 1582970 D 258594 CDS NP_946779.1 39934503 2693012 complement(1584105..1585541) 1 NC_005296.1 coenzyme F390 synthetase 1585541 2693012 RPA1429 Rhodopseudomonas palustris CGA009 coenzyme F390 synthetase NP_946779.1 1584105 R 258594 CDS NP_946780.1 39934504 2692983 complement(1585538..1586323) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane protein 1586323 2692983 RPA1430 Rhodopseudomonas palustris CGA009 outer membrane protein NP_946780.1 1585538 R 258594 CDS NP_946781.1 39934505 2692966 1587454..1588287 1 NC_005296.1 NAD+ ADP-ribosyltransferase 1588287 draT1 2692966 draT1 Rhodopseudomonas palustris CGA009 NAD+ ADP-ribosyltransferase NP_946781.1 1587454 D 258594 CDS NP_946782.1 39934506 2691184 complement(1588459..1588989) 1 NC_005296.1 nitroimidazole resistance protein 1588989 2691184 RPA1432 Rhodopseudomonas palustris CGA009 nitroimidazole resistance protein NP_946782.1 1588459 R 258594 CDS NP_946783.1 39934507 2692942 complement(1589047..1589637) 1 NC_005296.1 hypothetical protein 1589637 2692942 RPA1433 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946783.1 1589047 R 258594 CDS NP_946784.1 39934508 2691166 complement(1589634..1590326) 1 NC_005296.1 hypothetical protein 1590326 2691166 RPA1434 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946784.1 1589634 R 258594 CDS NP_946785.1 39934509 2692900 complement(1590406..1591791) 1 NC_005296.1 alternative nitrogenase 3 subunit beta 1591791 anfK 2692900 anfK Rhodopseudomonas palustris CGA009 alternative nitrogenase 3 subunit beta NP_946785.1 1590406 R 258594 CDS NP_946786.1 39934510 2692885 complement(1591804..1592244) 1 NC_005296.1 dinitrogenase 3 subunit delta 1592244 anfG 2692885 anfG Rhodopseudomonas palustris CGA009 dinitrogenase 3 subunit delta NP_946786.1 1591804 R 258594 CDS NP_946787.1 39934511 2691165 complement(1592257..1593825) 1 NC_005296.1 nitrogenase molybdenum-iron protein subunit alpha 1593825 anfD 2691165 anfD Rhodopseudomonas palustris CGA009 nitrogenase molybdenum-iron protein subunit alpha NP_946787.1 1592257 R 258594 CDS NP_946788.1 39934512 2692853 complement(1593875..1594702) 1 NC_005296.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; alternative NifH, may be molybdenum-independent; nitrogenase reductase 1594702 nifH 2692853 nifH Rhodopseudomonas palustris CGA009 nitrogenase reductase NP_946788.1 1593875 R 258594 CDS NP_946789.1 39934513 2691154 complement(1595226..1596854) 1 NC_005296.1 Fis family transcriptional regulator 1596854 anfA 2691154 anfA Rhodopseudomonas palustris CGA009 Fis family transcriptional regulator NP_946789.1 1595226 R 258594 CDS NP_946790.1 39934514 2692814 complement(1597076..1597600) 1 NC_005296.1 hypothetical protein 1597600 2692814 RPA1440 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946790.1 1597076 R 258594 CDS NP_946791.1 39934515 2691119 complement(1597783..1598604) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; uridylate kinase 1598604 2691119 RPA1441 Rhodopseudomonas palustris CGA009 uridylate kinase NP_946791.1 1597783 R 258594 CDS NP_946792.1 39934516 2691885 complement(1598614..1599426) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; uridine monophosphate kinase 1599426 2691885 RPA1442 Rhodopseudomonas palustris CGA009 uridine monophosphate kinase NP_946792.1 1598614 R 258594 CDS NP_946793.1 39934517 2692793 complement(1599719..1600534) 1 NC_005296.1 GntR family transcriptional regulator 1600534 2692793 RPA1443 Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_946793.1 1599719 R 258594 CDS NP_946794.1 39934518 2690086 1600910..1601911 1 NC_005296.1 oligopeptide binding protein 1601911 2690086 RPA1444 Rhodopseudomonas palustris CGA009 oligopeptide binding protein NP_946794.1 1600910 D 258594 CDS NP_946795.1 39934519 2692785 1601908..1602957 1 NC_005296.1 oligopeptide transport ATP-binding protein 1602957 2692785 RPA1445 Rhodopseudomonas palustris CGA009 oligopeptide transport ATP-binding protein NP_946795.1 1601908 D 258594 CDS NP_946796.1 39934520 2692750 1602948..1604501 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptide ABC transporter 1604501 2692750 RPA1446 Rhodopseudomonas palustris CGA009 peptide ABC transporter NP_946796.1 1602948 D 258594 CDS NP_946797.1 39934521 2689013 1604542..1605510 1 NC_005296.1 oligopeptide ABC transporter permease 1605510 2689013 RPA1447 Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter permease NP_946797.1 1604542 D 258594 CDS NP_946798.1 39934522 2689031 1605507..1606391 1 NC_005296.1 oligopeptide ABC transporter permease 1606391 2689031 RPA1448 Rhodopseudomonas palustris CGA009 oligopeptide ABC transporter permease NP_946798.1 1605507 D 258594 CDS NP_946799.1 39934523 2692732 1606418..1608133 1 NC_005296.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 1608133 2692732 RPA1449 Rhodopseudomonas palustris CGA009 acyl-CoA synthetase NP_946799.1 1606418 D 258594 CDS NP_946800.1 39934524 2692719 1608197..1611508 1 NC_005296.1 pyruvate carboxylase 1611508 2692719 RPA1450 Rhodopseudomonas palustris CGA009 pyruvate carboxylase NP_946800.1 1608197 D 258594 CDS NP_946801.1 39934525 2691081 1611539..1612492 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1612492 2691081 RPA1451 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946801.1 1611539 D 258594 CDS NP_946802.1 39934526 2692688 complement(1612499..1612654) 1 NC_005296.1 hypothetical protein 1612654 2692688 RPA1452 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946802.1 1612499 R 258594 CDS NP_946803.1 39934527 2691058 1612792..1613400 1 NC_005296.1 denitrification protein NorE 1613400 norE 2691058 norE Rhodopseudomonas palustris CGA009 denitrification protein NorE NP_946803.1 1612792 D 258594 CDS NP_946804.1 39934528 2690153 1613405..1613674 1 NC_005296.1 hypothetical protein 1613674 2690153 RPA1454 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946804.1 1613405 D 258594 CDS NP_946805.1 39934529 2691005 1613786..1614238 1 NC_005296.1 nitric-oxide reductase subunit C 1614238 norC 2691005 norC Rhodopseudomonas palustris CGA009 nitric-oxide reductase subunit C NP_946805.1 1613786 D 258594 CDS NP_946806.1 39934530 2690973 1614273..1615622 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitric-oxide reductase subunit B 1615622 norB 2690973 norB Rhodopseudomonas palustris CGA009 nitric-oxide reductase subunit B NP_946806.1 1614273 D 258594 CDS NP_946807.1 39934531 2690090 1615677..1616489 1 NC_005296.1 regulatory protein NorQ ATPase 1616489 norQ 2690090 norQ Rhodopseudomonas palustris CGA009 regulatory protein NorQ ATPase NP_946807.1 1615677 D 258594 CDS NP_946808.1 39934532 2690081 1616615..1618525 1 NC_005296.1 dinitrification protein NorD 1618525 norD 2690081 norD Rhodopseudomonas palustris CGA009 dinitrification protein NorD NP_946808.1 1616615 D 258594 CDS NP_946809.1 39934533 2689937 complement(1619349..1620434) 1 NC_005296.1 hypothetical protein 1620434 2689937 RPA1461 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946809.1 1619349 R 258594 CDS NP_946810.1 39934534 2692536 complement(1620457..1621665) 1 NC_005296.1 hypothetical protein 1621665 2692536 RPA1462 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946810.1 1620457 R 258594 CDS NP_946811.1 39934535 2692514 1621994..1623850 1 NC_005296.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1623850 ilvD2 2692514 ilvD2 Rhodopseudomonas palustris CGA009 dihydroxy-acid dehydratase NP_946811.1 1621994 D 258594 CDS NP_946812.1 39934536 2692497 complement(1623973..1624776) 1 NC_005296.1 glutamine amidotransferase 1624776 2692497 RPA1464 Rhodopseudomonas palustris CGA009 glutamine amidotransferase NP_946812.1 1623973 R 258594 CDS NP_946813.1 39934537 2690884 1625022..1626836 1 NC_005296.1 chloride channel 1626836 2690884 RPA1465 Rhodopseudomonas palustris CGA009 chloride channel NP_946813.1 1625022 D 258594 CDS NP_946814.1 39934538 2690864 complement(1626850..1628655) 1 NC_005296.1 catalyzes the hydrolysis of allophanate; allophanate hydrolase 1628655 2690864 RPA1466 Rhodopseudomonas palustris CGA009 allophanate hydrolase NP_946814.1 1626850 R 258594 CDS NP_946815.1 39934539 2690857 complement(1628652..1629317) 1 NC_005296.1 GntR family transcriptional regulator 1629317 2690857 RPA1467 Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_946815.1 1628652 R 258594 CDS NP_946816.1 39934540 2690834 complement(1629395..1629790) 1 NC_005296.1 hypothetical protein 1629790 2690834 RPA1468 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946816.1 1629395 R 258594 CDS NP_946817.1 39934541 2690828 complement(1629793..1631250) 1 NC_005296.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1631250 gatA1 2690828 gatA1 Rhodopseudomonas palustris CGA009 amidase NP_946817.1 1629793 R 258594 CDS NP_946818.1 39934542 2690816 complement(1631482..1633305) 1 NC_005296.1 dipeptide ABC transporter 1633305 2690816 RPA1470 Rhodopseudomonas palustris CGA009 dipeptide ABC transporter NP_946818.1 1631482 R 258594 CDS NP_946819.1 39934543 2692451 complement(1633461..1634375) 1 NC_005296.1 dipeptide ABC transporter permease 1634375 2692451 RPA1471 Rhodopseudomonas palustris CGA009 dipeptide ABC transporter permease NP_946819.1 1633461 R 258594 CDS NP_946820.1 39934544 2692435 complement(1634380..1635393) 1 NC_005296.1 dipeptide transport permease 1635393 2692435 RPA1472 Rhodopseudomonas palustris CGA009 dipeptide transport permease NP_946820.1 1634380 R 258594 CDS NP_946821.1 39934545 2692434 complement(1635563..1637233) 1 NC_005296.1 peptide transport system substrate-binding protein 1637233 2692434 RPA1473 Rhodopseudomonas palustris CGA009 peptide transport system substrate-binding protein NP_946821.1 1635563 R 258594 CDS NP_946822.1 39934546 2690752 complement(1637561..1638025) 1 NC_005296.1 hypothetical protein 1638025 2690752 RPA1474 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946822.1 1637561 R 258594 CDS NP_946823.1 39934547 2690128 complement(1638270..1638509) 1 NC_005296.1 hypothetical protein 1638509 2690128 RPA1475 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946823.1 1638270 R 258594 CDS NP_946824.1 39934548 2692376 1638835..1639842 1 NC_005296.1 periplasmic solute-binding protein 1639842 2692376 RPA1476 Rhodopseudomonas palustris CGA009 periplasmic solute-binding protein NP_946824.1 1638835 D 258594 CDS NP_946825.1 39934549 2691871 1639890..1640705 1 NC_005296.1 permease 1640705 2691871 RPA1477 Rhodopseudomonas palustris CGA009 permease NP_946825.1 1639890 D 258594 CDS NP_946826.1 39934550 2689829 1640710..1641495 1 NC_005296.1 permease 1641495 2689829 RPA1478 Rhodopseudomonas palustris CGA009 permease NP_946826.1 1640710 D 258594 CDS NP_946827.1 39934551 2690207 1641492..1642553 1 NC_005296.1 transport system ATP-binding protein 1642553 2690207 RPA1479 Rhodopseudomonas palustris CGA009 transport system ATP-binding protein NP_946827.1 1641492 D 258594 CDS NP_946828.1 39934552 2690730 1642550..1643407 1 NC_005296.1 ICC protein 1643407 cpdA 2690730 cpdA Rhodopseudomonas palustris CGA009 ICC protein NP_946828.1 1642550 D 258594 CDS NP_946829.1 39934553 2690191 1643544..1643906 1 NC_005296.1 chemotaxis protein CheY 1643906 2690191 RPA1481 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_946829.1 1643544 D 258594 CDS NP_946830.1 39934554 2692257 1644037..1644882 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1644882 2692257 RPA1482 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946830.1 1644037 D 258594 CDS NP_946831.1 39934555 2690697 complement(1644893..1646128) 1 NC_005296.1 NAD binding site:FAD dependent oxidoreductase 1646128 2690697 RPA1483 Rhodopseudomonas palustris CGA009 NAD binding site:FAD dependent oxidoreductase NP_946831.1 1644893 R 258594 CDS NP_946832.1 39934556 2692223 1646478..1648130 1 NC_005296.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1648130 pgm2 2692223 pgm2 Rhodopseudomonas palustris CGA009 phosphoglucomutase NP_946832.1 1646478 D 258594 CDS NP_946833.1 39934557 2692196 1648233..1649000 1 NC_005296.1 NnrU family protein 1649000 nnrU 2692196 nnrU Rhodopseudomonas palustris CGA009 NnrU family protein NP_946833.1 1648233 D 258594 CDS NP_946834.1 39934558 2690676 1649216..1650442 1 NC_005296.1 heme-Cu protein NnrS 1650442 2690676 RPA1486 Rhodopseudomonas palustris CGA009 heme-Cu protein NnrS NP_946834.1 1649216 D 258594 CDS NP_946835.1 39934559 2690639 1650481..1650729 1 NC_005296.1 hypothetical protein 1650729 2690639 RPA1487 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946835.1 1650481 D 258594 CDS NP_946836.1 39934560 2690621 complement(1650733..1651935) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; L-carnitine dehydratase/bile acid-inducible protein F 1651935 2690621 RPA1488 Rhodopseudomonas palustris CGA009 L-carnitine dehydratase/bile acid-inducible protein F NP_946836.1 1650733 R 258594 CDS NP_946837.1 39934561 2690592 complement(1652068..1652739) 1 NC_005296.1 LuxR family transcriptional regulator 1652739 2690592 RPA1489 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_946837.1 1652068 R 258594 CDS NP_946838.1 39934562 2692146 complement(1652759..1655071) 1 NC_005296.1 bacteriophytochrome PhyB 1655071 phyB4 2692146 phyB4 Rhodopseudomonas palustris CGA009 bacteriophytochrome PhyB NP_946838.1 1652759 R 258594 CDS NP_946839.1 39934563 2690556 1655417..1655572 1 NC_005296.1 light harvesting protein B-800-850 beta subunit E 1655572 pucBe 2690556 pucBe Rhodopseudomonas palustris CGA009 light harvesting protein B-800-850 beta subunit E NP_946839.1 1655417 D 258594 CDS NP_946840.1 39934564 2692095 1655585..1655764 1 NC_005296.1 light harvesting protein B-800-850 alpha subunit E 1655764 pucAe 2692095 pucAe Rhodopseudomonas palustris CGA009 light harvesting protein B-800-850 alpha subunit E NP_946840.1 1655585 D 258594 CDS NP_946841.1 39934565 2690540 1655951..1657387 1 NC_005296.1 chlorophyll major facilitator superfamily (MFS) exporter PucC 1657387 pucC 2690540 pucC Rhodopseudomonas palustris CGA009 chlorophyll major facilitator superfamily (MFS) exporter PucC NP_946841.1 1655951 D 258594 CDS NP_946842.1 39934566 2692054 1657406..1658056 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1658056 2692054 RPA1494 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946842.1 1657406 D 258594 CDS NP_946843.1 39934567 2692027 1658072..1658365 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1658365 2692027 RPA1495 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946843.1 1658072 D 258594 CDS NP_946844.1 39934568 2690499 1658506..1660047 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; monooxygenase 1660047 2690499 RPA1496 Rhodopseudomonas palustris CGA009 monooxygenase NP_946844.1 1658506 D 258594 CDS NP_946845.1 39934569 2689361 1660402..1661601 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; RND multidrug efflux membrane fusion protein MexC 1661601 mexC1 2689361 mexC1 Rhodopseudomonas palustris CGA009 RND multidrug efflux membrane fusion protein MexC NP_946845.1 1660402 D 258594 CDS NP_946846.1 39934570 2689001 1661612..1664779 1 NC_005296.1 RND multidrug efflux transporter MexD 1664779 mexD2 2689001 mexD2 Rhodopseudomonas palustris CGA009 RND multidrug efflux transporter MexD NP_946846.1 1661612 D 258594 CDS NP_946847.1 39934571 2690445 1664916..1665368 1 NC_005296.1 hypothetical protein 1665368 2690445 RPA1499 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946847.1 1664916 D 258594 CDS NP_946848.1 39934572 2690397 complement(1665626..1666225) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1666225 2690397 RPA1500 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946848.1 1665626 R 258594 CDS NP_946849.1 39934573 2690368 complement(1666188..1667417) 1 NC_005296.1 coenzyme F420 hydrogenase subunit beta 1667417 2690368 RPA1501 Rhodopseudomonas palustris CGA009 coenzyme F420 hydrogenase subunit beta NP_946849.1 1666188 R 258594 CDS NP_946850.1 39934574 2691992 complement(1667478..1667966) 1 NC_005296.1 hypothetical protein 1667966 2691992 RPA1502 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946850.1 1667478 R 258594 CDS NP_946851.1 39934575 2690371 complement(1667966..1669576) 1 NC_005296.1 hypothetical protein 1669576 2690371 RPA1503 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946851.1 1667966 R 258594 CDS NP_946852.1 39934576 2691437 complement(1669576..1670889) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1670889 2691437 RPA1504 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946852.1 1669576 R 258594 CDS NP_946853.1 39934577 2691941 1671137..1672120 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; porphobilinogen deaminase 1672120 2691941 RPA1505 Rhodopseudomonas palustris CGA009 porphobilinogen deaminase NP_946853.1 1671137 D 258594 CDS NP_946854.1 39934578 2691624 1672126..1673148 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; magnesium chelatase ATPase subunit I 1673148 bchI 2691624 bchI Rhodopseudomonas palustris CGA009 magnesium chelatase ATPase subunit I NP_946854.1 1672126 D 258594 CDS NP_946855.1 39934579 2688938 1673145..1674917 1 NC_005296.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit D 1674917 bchD 2688938 bchD Rhodopseudomonas palustris CGA009 magnesium chelatase subunit D NP_946855.1 1673145 D 258594 CDS NP_946856.1 39934580 2691920 complement(1674960..1675691) 1 NC_005296.1 hypothetical protein 1675691 2691920 RPA1508 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946856.1 1674960 R 258594 CDS NP_946857.1 39934581 2691366 complement(1676073..1677050) 1 NC_005296.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1677050 hemE 2691366 hemE Rhodopseudomonas palustris CGA009 uroporphyrinogen decarboxylase NP_946857.1 1676073 R 258594 CDS NP_946858.1 39934582 2691583 1677230..1678183 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1678183 2691583 RPA1510 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946858.1 1677230 D 258594 CDS NP_946859.1 39934583 2688978 1678194..1679081 1 NC_005296.1 alpha/beta hydrolase 1679081 2688978 RPA1511 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase NP_946859.1 1678194 D 258594 CDS NP_946860.1 39934584 2689120 1679157..1680692 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; amine oxidase 1680692 crtI 2689120 crtI Rhodopseudomonas palustris CGA009 amine oxidase NP_946860.1 1679157 D 258594 CDS NP_946861.1 39934585 2688820 1680689..1681756 1 NC_005296.1 squalene/phytoene synthase 1681756 crtB 2688820 crtB Rhodopseudomonas palustris CGA009 squalene/phytoene synthase NP_946861.1 1680689 D 258594 CDS NP_946862.1 39934586 2691498 1682058..1682969 1 NC_005296.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1682969 hemF 2691498 hemF Rhodopseudomonas palustris CGA009 coproporphyrinogen III oxidase NP_946862.1 1682058 D 258594 CDS NP_946863.1 39934587 2691415 complement(1683019..1683855) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1683855 2691415 RPA1515 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946863.1 1683019 R 258594 CDS NP_946864.1 39934588 2691319 1684156..1684290 1 NC_005296.1 hypothetical protein 1684290 2691319 RPA1516 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946864.1 1684156 D 258594 CDS NP_946865.1 39934589 2688862 complement(1684504..1685457) 1 NC_005296.1 hydroxyneurosporene synthase 1685457 crtC 2688862 crtC Rhodopseudomonas palustris CGA009 hydroxyneurosporene synthase NP_946865.1 1684504 R 258594 CDS NP_946866.1 39934590 2688863 complement(1685462..1687021) 1 NC_005296.1 FAD dependent oxidoreductase 1687021 crtD 2688863 crtD Rhodopseudomonas palustris CGA009 FAD dependent oxidoreductase NP_946866.1 1685462 R 258594 CDS NP_946867.1 39934591 2691526 1687143..1688009 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; polyprenyl synthetase 1688009 crtE 2691526 crtE Rhodopseudomonas palustris CGA009 polyprenyl synthetase NP_946867.1 1687143 D 258594 CDS NP_946868.1 39934592 2688983 1688059..1689180 1 NC_005296.1 O-methyltransferase family 2 1689180 crtF 2688983 crtF Rhodopseudomonas palustris CGA009 O-methyltransferase family 2 NP_946868.1 1688059 D 258594 CDS NP_946869.1 39934593 2691565 1689269..1690207 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chlorophyll synthesis pathway protein BchC 1690207 bchC 2691565 bchC Rhodopseudomonas palustris CGA009 chlorophyll synthesis pathway protein BchC NP_946869.1 1689269 D 258594 CDS NP_946870.1 39934594 2691564 1690207..1691205 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chlorophyllide reductase iron protein subunit X 1691205 bchX 2691564 bchX Rhodopseudomonas palustris CGA009 chlorophyllide reductase iron protein subunit X NP_946870.1 1690207 D 258594 CDS NP_946871.1 39934595 2691506 1691229..1692815 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chlorophyllide reductase subunit Y 1692815 bchY 2691506 bchY Rhodopseudomonas palustris CGA009 chlorophyllide reductase subunit Y NP_946871.1 1691229 D 258594 CDS NP_946872.1 39934596 2691307 1692815..1694263 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chlorophyllide reductase subunit Z 1694263 bchZ 2691307 bchZ Rhodopseudomonas palustris CGA009 chlorophyllide reductase subunit Z NP_946872.1 1692815 D 258594 CDS NP_946873.1 39934597 2688734 1694719..1694916 1 NC_005296.1 antenna complex alpha/beta subunit 1694916 pufB 2688734 pufB Rhodopseudomonas palustris CGA009 antenna complex alpha/beta subunit NP_946873.1 1694719 D 258594 CDS NP_946874.1 39934598 2688871 1694932..1695123 1 NC_005296.1 light-harvesting complex 1 subunit alpha 1695123 pufA 2688871 pufA Rhodopseudomonas palustris CGA009 light-harvesting complex 1 subunit alpha NP_946874.1 1694932 D 258594 CDS NP_946875.1 39934599 2691296 1695255..1696088 1 NC_005296.1 photosynthetic reaction center subunit L 1696088 pufL 2691296 pufL Rhodopseudomonas palustris CGA009 photosynthetic reaction center subunit L NP_946875.1 1695255 D 258594 CDS NP_946876.1 39934600 2691460 1696116..1697039 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; photosynthetic reaction center subunit M 1697039 pufM 2691460 pufM Rhodopseudomonas palustris CGA009 photosynthetic reaction center subunit M NP_946876.1 1696116 D 258594 CDS NP_946877.1 39934601 2691562 1697302..1698756 1 NC_005296.1 transcriptional regulator PpsR1 1698756 ppsR1 2691562 ppsR1 Rhodopseudomonas palustris CGA009 transcriptional regulator PpsR1 NP_946877.1 1697302 D 258594 CDS NP_946878.1 39934602 2691561 1698749..1699642 1 NC_005296.1 bacteriochlorophyll/chlorophyll a synthase 1699642 bchG 2691561 bchG Rhodopseudomonas palustris CGA009 bacteriochlorophyll/chlorophyll a synthase NP_946878.1 1698749 D 258594 CDS NP_946879.1 39934603 2691283 1699645..1700961 1 NC_005296.1 light harvesting pigment major facilitator family (MFS) transporter Bch2 1700961 2691283 RPA1531 Rhodopseudomonas palustris CGA009 light harvesting pigment major facilitator family (MFS) transporter Bch2 NP_946879.1 1699645 D 258594 CDS NP_946880.1 39934604 2691273 1700963..1702168 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; geranylgeranyl reductase 1702168 bchP 2691273 bchP Rhodopseudomonas palustris CGA009 geranylgeranyl reductase NP_946880.1 1700963 D 258594 CDS NP_946881.1 39934605 2688888 1702188..1702652 1 NC_005296.1 TspO/MBR family protein 1702652 tspO 2688888 tspO Rhodopseudomonas palustris CGA009 TspO/MBR family protein NP_946881.1 1702188 D 258594 CDS NP_946882.1 39934606 2691608 1702689..1702961 1 NC_005296.1 hypothetical protein 1702961 2691608 RPA1534 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946882.1 1702689 D 258594 CDS NP_946883.1 39934607 2691483 complement(1703088..1703507) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; class I cytochrome c 1703507 cycA 2691483 cycA Rhodopseudomonas palustris CGA009 class I cytochrome c NP_946883.1 1703088 R 258594 CDS NP_946884.1 39934608 2691321 1703829..1705223 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; transcriptional regulator PpsR2 1705223 ppsR2 2691321 ppsR2 Rhodopseudomonas palustris CGA009 transcriptional regulator PpsR2 NP_946884.1 1703829 D 258594 CDS NP_946885.1 39934609 2691479 complement(1707550..1708212) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; heme oxygenase 1708212 2691479 RPA1539 Rhodopseudomonas palustris CGA009 heme oxygenase NP_946885.1 1707550 R 258594 CDS NP_946886.1 39934610 2691489 complement(1708273..1709154) 1 NC_005296.1 coenzyme B12-binding protein 1709154 2691489 RPA1540 Rhodopseudomonas palustris CGA009 coenzyme B12-binding protein NP_946886.1 1708273 R 258594 CDS NP_946887.1 39934611 2688883 1709486..1709971 1 NC_005296.1 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD 1709971 bchF 2688883 bchF Rhodopseudomonas palustris CGA009 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD NP_946887.1 1709486 D 258594 CDS NP_946888.1 39934612 2688988 1709968..1711257 1 NC_005296.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N 1711257 bchN 2688988 bchN Rhodopseudomonas palustris CGA009 light-independent protochlorophyllide reductase subunit N NP_946888.1 1709968 D 258594 CDS NP_946889.1 39934613 2691605 1711260..1712882 1 NC_005296.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B 1712882 bchB 2691605 bchB Rhodopseudomonas palustris CGA009 light-independent protochlorophyllide reductase subunit B NP_946889.1 1711260 D 258594 CDS NP_946890.1 39934614 2691356 1712857..1716603 1 NC_005296.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit H 1716603 bchH 2691356 bchH Rhodopseudomonas palustris CGA009 magnesium chelatase subunit H NP_946890.1 1712857 D 258594 CDS NP_946891.1 39934615 2689137 1716600..1717538 1 NC_005296.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein 1717538 chlL 2689137 chlL Rhodopseudomonas palustris CGA009 protochlorophyllide reductase iron-sulfur ATP-binding protein NP_946891.1 1716600 D 258594 CDS NP_946892.1 39934616 2688904 1717538..1718239 1 NC_005296.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase 1718239 bchM 2688904 bchM Rhodopseudomonas palustris CGA009 Mg-protoporphyrin IX methyl transferase NP_946892.1 1717538 D 258594 CDS NP_946893.1 39934617 2691482 1718236..1719669 1 NC_005296.1 photosynthetic complex (LH1) assembly protein LhaA 1719669 lhaA 2691482 lhaA Rhodopseudomonas palustris CGA009 photosynthetic complex (LH1) assembly protein LhaA NP_946893.1 1718236 D 258594 CDS NP_946894.1 39934618 2691302 1719692..1720459 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; photosynthetic reaction center complex subunit H1 1720459 puhA 2691302 puhA Rhodopseudomonas palustris CGA009 photosynthetic reaction center complex subunit H1 NP_946894.1 1719692 D 258594 CDS NP_946895.1 39934619 2691491 1720456..1721118 1 NC_005296.1 photosynthetic complex assembly protein 1721118 2691491 RPA1549 Rhodopseudomonas palustris CGA009 photosynthetic complex assembly protein NP_946895.1 1720456 D 258594 CDS NP_946896.1 39934620 2691313 1721134..1721640 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; photosynthetic complex assembly protein 1721640 2691313 RPA1550 Rhodopseudomonas palustris CGA009 photosynthetic complex assembly protein NP_946896.1 1721134 D 258594 CDS NP_946897.1 39934621 2691269 1721643..1721942 1 NC_005296.1 hypothetical protein 1721942 2691269 RPA1551 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946897.1 1721643 D 258594 CDS NP_946898.1 39934622 2691628 1721939..1723036 1 NC_005296.1 oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase 1723036 2691628 RPA1552 Rhodopseudomonas palustris CGA009 magnesium-protoporphyrin IX monomethyl ester cyclase NP_946898.1 1721939 D 258594 CDS NP_946899.1 39934623 2691301 1723050..1724114 1 NC_005296.1 hypothetical protein 1724114 2691301 RPA1553 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946899.1 1723050 D 258594 CDS NP_946900.1 39934624 2691323 1724111..1725322 1 NC_005296.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 1725322 hemA 2691323 hemA Rhodopseudomonas palustris CGA009 5-aminolevulinate synthase NP_946900.1 1724111 D 258594 CDS NP_946901.1 39934625 2691486 complement(1725664..1726632) 1 NC_005296.1 transcription regulator LysR 1726632 cbbR 2691486 cbbR Rhodopseudomonas palustris CGA009 transcription regulator LysR NP_946901.1 1725664 R 258594 CDS NP_946902.1 39934626 2688891 1727226..1727915 1 NC_005296.1 phosphotransferase 1727915 2688891 RPA1556 Rhodopseudomonas palustris CGA009 phosphotransferase NP_946902.1 1727226 D 258594 CDS NP_946903.1 39934627 2692873 1727937..1728773 1 NC_005296.1 response regulator receiver 1728773 2692873 RPA1557 Rhodopseudomonas palustris CGA009 response regulator receiver NP_946903.1 1727937 D 258594 CDS NP_946904.1 39934628 2688936 1728789..1731500 1 NC_005296.1 sensor histidine kinase 1731500 2688936 RPA1558 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_946904.1 1728789 D 258594 CDS NP_946905.1 39934629 2691334 1731700..1733157 1 NC_005296.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 1733157 rbcL 2691334 rbcL Rhodopseudomonas palustris CGA009 ribulose bisophosphate carboxylase NP_946905.1 1731700 D 258594 CDS NP_946906.1 39934630 2688740 1733171..1733593 1 NC_005296.1 ribulose-bisphosphate carboxylase small chain 1733593 cbbS 2688740 cbbS Rhodopseudomonas palustris CGA009 ribulose-bisphosphate carboxylase small chain NP_946906.1 1733171 D 258594 CDS NP_946907.1 39934631 2688922 1733596..1734522 1 NC_005296.1 cbbX protein 1734522 cbbX 2688922 cbbX Rhodopseudomonas palustris CGA009 cbbX protein NP_946907.1 1733596 D 258594 CDS NP_946908.1 39934632 2688965 complement(1734580..1735554) 1 NC_005296.1 LysR family transcriptional regulator 1735554 2688965 RPA1562 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_946908.1 1734580 R 258594 CDS NP_946909.1 39934633 2691266 1735691..1736740 1 NC_005296.1 nitrilase 1736740 2691266 RPA1563 Rhodopseudomonas palustris CGA009 nitrilase NP_946909.1 1735691 D 258594 CDS NP_946910.1 39934634 2688885 1736816..1738132 1 NC_005296.1 urea/short-chain amide transport system substrate-binding protein 1738132 2688885 RPA1564 Rhodopseudomonas palustris CGA009 urea/short-chain amide transport system substrate-binding protein NP_946910.1 1736816 D 258594 CDS NP_946911.1 39934635 2688887 1738141..1739016 1 NC_005296.1 urea/short-chain amide transport system permease 1739016 2688887 RPA1565 Rhodopseudomonas palustris CGA009 urea/short-chain amide transport system permease NP_946911.1 1738141 D 258594 CDS NP_946912.1 39934636 2691340 1739013..1740878 1 NC_005296.1 branched chain amino acid ABC transporter ATP-binding protein 1740878 2691340 RPA1566 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_946912.1 1739013 D 258594 CDS NP_946913.1 39934637 2691470 1740865..1741569 1 NC_005296.1 branched-chain amino acid transport system ATP-binding protein 1741569 2691470 RPA1567 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_946913.1 1740865 D 258594 CDS NP_946914.1 39934638 2691474 complement(1741619..1742401) 1 NC_005296.1 alpha/beta hydrolase 1742401 2691474 RPA1568 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase NP_946914.1 1741619 R 258594 CDS NP_946915.1 39934639 2691563 complement(1742405..1743700) 1 NC_005296.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 1743700 2691563 RPA1569 Rhodopseudomonas palustris CGA009 O-acetylhomoserine aminocarboxypropyltransferase NP_946915.1 1742405 R 258594 CDS NP_946916.1 39934640 2691458 complement(1743857..1745974) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; oligopeptidase B 1745974 2691458 RPA1570 Rhodopseudomonas palustris CGA009 oligopeptidase B NP_946916.1 1743857 R 258594 CDS NP_946917.1 39934641 2691536 1746102..1746980 1 NC_005296.1 dihydrodipicolinate synthetase 1746980 dapA1 2691536 dapA1 Rhodopseudomonas palustris CGA009 dihydrodipicolinate synthetase NP_946917.1 1746102 D 258594 CDS NP_946918.1 39934642 2691541 1747205..1749535 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbon-monoxide dehydrogenase large subunit 1749535 2691541 RPA1572 Rhodopseudomonas palustris CGA009 carbon-monoxide dehydrogenase large subunit NP_946918.1 1747205 D 258594 CDS NP_946919.1 39934643 2688994 1749613..1750227 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; LemA family protein 1750227 2688994 RPA1573 Rhodopseudomonas palustris CGA009 LemA family protein NP_946919.1 1749613 D 258594 CDS NP_946920.1 39934644 2691623 1750232..1751155 1 NC_005296.1 hypothetical protein 1751155 2691623 RPA1574 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946920.1 1750232 D 258594 CDS NP_946921.1 39934645 2691619 1751169..1751666 1 NC_005296.1 hypothetical protein 1751666 2691619 RPA1575 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946921.1 1751169 D 258594 CDS NP_946922.1 39934646 2689156 complement(1751748..1752359) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutathione S-transferase 1752359 2689156 RPA1576 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_946922.1 1751748 R 258594 CDS NP_946923.1 39934647 2691317 1752568..1753539 1 NC_005296.1 hypothetical protein 1753539 2691317 RPA1577 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946923.1 1752568 D 258594 CDS NP_946924.1 39934648 2691572 complement(1753696..1754469) 1 NC_005296.1 ferredoxin-NADP reductase 1754469 fpr 2691572 fpr Rhodopseudomonas palustris CGA009 ferredoxin-NADP reductase NP_946924.1 1753696 R 258594 CDS NP_946925.1 39934649 2691524 complement(1754786..1755994) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; L-carnitine dehydratase/bile acid-inducible protein F 1755994 2691524 RPA1579 Rhodopseudomonas palustris CGA009 L-carnitine dehydratase/bile acid-inducible protein F NP_946925.1 1754786 R 258594 CDS NP_946926.1 39934650 2689146 complement(1756159..1759167) 1 NC_005296.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1759167 putA 2689146 putA Rhodopseudomonas palustris CGA009 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase NP_946926.1 1756159 R 258594 CDS NP_946927.1 39934651 2688749 1759231..1759959 1 NC_005296.1 hypothetical protein 1759959 2688749 RPA1581 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946927.1 1759231 D 258594 CDS NP_946928.1 39934652 2691365 complement(1759984..1761765) 1 NC_005296.1 ferredoxin:adenylate/guanylate cyclase 1761765 cyaA 2691365 cyaA Rhodopseudomonas palustris CGA009 ferredoxin:adenylate/guanylate cyclase NP_946928.1 1759984 R 258594 CDS NP_946929.1 39934653 2688864 complement(1761958..1763067) 1 NC_005296.1 hypothetical protein 1763067 2688864 RPA1583 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946929.1 1761958 R 258594 CDS NP_946930.1 39934654 2688980 complement(1763064..1764533) 1 NC_005296.1 hypothetical protein 1764533 2688980 RPA1584 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946930.1 1763064 R 258594 CDS NP_946931.1 39934655 2688927 1764777..1765472 1 NC_005296.1 hemolysin III 1765472 2688927 RPA1585 Rhodopseudomonas palustris CGA009 hemolysin III NP_946931.1 1764777 D 258594 CDS NP_946932.1 39934656 2691591 1765532..1766332 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 1766332 2691591 RPA1586 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_946932.1 1765532 D 258594 CDS NP_946933.1 39934657 2691587 1766530..1766814 1 NC_005296.1 hypothetical protein 1766814 2691587 RPA1587 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946933.1 1766530 D 258594 CDS NP_946934.1 39934658 2691922 complement(1766818..1767900) 1 NC_005296.1 L-allo-threonine aldolase 1767900 2691922 RPA1588 Rhodopseudomonas palustris CGA009 L-allo-threonine aldolase NP_946934.1 1766818 R 258594 CDS NP_946935.1 39934659 2691546 complement(1768213..1768830) 1 NC_005296.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1768830 rpsD 2691546 rpsD Rhodopseudomonas palustris CGA009 30S ribosomal protein S4 NP_946935.1 1768213 R 258594 CDS NP_946936.1 39934660 2691962 complement(1769020..1769796) 1 NC_005296.1 hypothetical protein 1769796 2691962 RPA1590 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946936.1 1769020 R 258594 CDS NP_946937.1 39934661 2691986 complement(1769796..1770191) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1770191 2691986 RPA1591 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946937.1 1769796 R 258594 CDS NP_946938.1 39934662 2690366 complement(1770245..1771039) 1 NC_005296.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1771039 murI 2690366 murI Rhodopseudomonas palustris CGA009 glutamate racemase NP_946938.1 1770245 R 258594 CDS NP_946939.1 39934663 2692000 complement(1771122..1771610) 1 NC_005296.1 thioesterase 1771610 2692000 RPA1593 Rhodopseudomonas palustris CGA009 thioesterase NP_946939.1 1771122 R 258594 CDS NP_946940.1 39934664 2690380 1771765..1773129 1 NC_005296.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 1773129 trpB-1 2690380 trpB-1 Rhodopseudomonas palustris CGA009 tryptophan synthase subunit beta NP_946940.1 1771765 D 258594 CDS NP_946941.1 39934665 2690377 1773467..1774417 1 NC_005296.1 hypothetical protein 1774417 2690377 RPA1595 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946941.1 1773467 D 258594 CDS NP_946942.1 39934666 2690416 1774809..1775177 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; tryptophan synthase subunit beta 1775177 2690416 RPA1596 Rhodopseudomonas palustris CGA009 tryptophan synthase subunit beta NP_946942.1 1774809 D 258594 CDS NP_946943.1 39934667 2690442 1775573..1777783 1 NC_005296.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1777783 purQ 2690442 purQ Rhodopseudomonas palustris CGA009 phosphoribosylformylglycinamidine synthase II NP_946943.1 1775573 D 258594 CDS NP_946944.1 39934668 2690435 complement(1778029..1779210) 1 NC_005296.1 peptidyl-prolyl cis-trans isomerase 1779210 2690435 RPA1598 Rhodopseudomonas palustris CGA009 peptidyl-prolyl cis-trans isomerase NP_946944.1 1778029 R 258594 CDS NP_946945.1 39934669 2691406 complement(1779285..1779647) 1 NC_005296.1 hypothetical protein 1779647 2691406 RPA1599 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946945.1 1779285 R 258594 CDS NP_946946.1 39934670 2690475 1779811..1780047 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; BolA-like protein 1780047 2690475 RPA1600 Rhodopseudomonas palustris CGA009 BolA-like protein NP_946946.1 1779811 D 258594 CDS NP_946947.1 39934671 2690482 complement(1780122..1780646) 1 NC_005296.1 MarR family transcriptional regulator 1780646 2690482 RPA1601 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_946947.1 1780122 R 258594 CDS NP_946948.1 39934672 2690500 1781319..1782041 1 NC_005296.1 hypothetical protein 1782041 2690500 RPA1602 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946948.1 1781319 D 258594 CDS NP_946949.1 39934673 2690305 complement(1782103..1783170) 1 NC_005296.1 fatty acid desaturase 1783170 2690305 RPA1603 Rhodopseudomonas palustris CGA009 fatty acid desaturase NP_946949.1 1782103 R 258594 CDS NP_946950.1 39934674 2690308 complement(1783527..1784507) 1 NC_005296.1 hypothetical protein 1784507 2690308 RPA1604 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946950.1 1783527 R 258594 CDS NP_946951.1 39934675 2690029 complement(1784553..1785812) 1 NC_005296.1 hypothetical protein 1785812 2690029 RPA1605 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946951.1 1784553 R 258594 CDS NP_946952.1 39934676 2690278 1786040..1786423 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1786423 2690278 RPA1606 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946952.1 1786040 D 258594 CDS NP_946953.1 39934677 2692066 1786420..1786962 1 NC_005296.1 CTG start codon; 64% identity to Bradyrhizobium japonicum Bll5710 protein; Appr-1''-p processing enzyme family protein 1786962 2692066 RPA1607 Rhodopseudomonas palustris CGA009 Appr-1''-p processing enzyme family protein NP_946953.1 1786420 D 258594 CDS NP_946954.1 39934678 2690553 1787022..1788302 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-lactamase 1788302 2690553 RPA1608 Rhodopseudomonas palustris CGA009 beta-lactamase NP_946954.1 1787022 D 258594 CDS NP_946955.1 39934679 2692115 complement(1788313..1789941) 1 NC_005296.1 catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase 1789941 mdlC 2692115 mdlC Rhodopseudomonas palustris CGA009 benzoylformate decarboxylase NP_946955.1 1788313 R 258594 CDS NP_946956.1 39934680 2692133 complement(1790211..1791068) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1791068 2692133 RPA1610 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946956.1 1790211 R 258594 CDS NP_946957.1 39934681 2690585 complement(1791081..1792175) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; L-carnitine dehydratase/bile acid-inducible protein F 1792175 2690585 RPA1611 Rhodopseudomonas palustris CGA009 L-carnitine dehydratase/bile acid-inducible protein F NP_946957.1 1791081 R 258594 CDS NP_946958.1 39934682 2690588 complement(1792376..1793548) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 1793548 2690588 RPA1612 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_946958.1 1792376 R 258594 CDS NP_946959.1 39934683 2690185 complement(1793582..1794847) 1 NC_005296.1 cytochrome P450 1794847 2690185 RPA1613 Rhodopseudomonas palustris CGA009 cytochrome P450 NP_946959.1 1793582 R 258594 CDS NP_946960.1 39934684 2690630 1795195..1796367 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; isovaleryl-CoA dehydrogenase 1796367 ivd2 2690630 ivd2 Rhodopseudomonas palustris CGA009 isovaleryl-CoA dehydrogenase NP_946960.1 1795195 D 258594 CDS NP_946961.1 39934685 2690643 1796463..1797257 1 NC_005296.1 methyltransferase 1797257 2690643 RPA1615 Rhodopseudomonas palustris CGA009 methyltransferase NP_946961.1 1796463 D 258594 CDS NP_946962.1 39934686 2690672 complement(1797254..1798060) 1 NC_005296.1 hypothetical protein 1798060 2690672 RPA1616 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946962.1 1797254 R 258594 CDS NP_946963.1 39934687 2690041 complement(1798147..1798728) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ErfK/YbiS/YcfS/YnhG protein 1798728 2690041 RPA1617 Rhodopseudomonas palustris CGA009 ErfK/YbiS/YcfS/YnhG protein NP_946963.1 1798147 R 258594 CDS NP_946964.1 39934688 2692204 1798909..1800453 1 NC_005296.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 1800453 ilvX 2692204 ilvX Rhodopseudomonas palustris CGA009 hypothetical protein NP_946964.1 1798909 D 258594 CDS NP_946965.1 39934689 2690688 1800509..1800997 1 NC_005296.1 hypothetical protein 1800997 2690688 RPA1619 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946965.1 1800509 D 258594 CDS NP_946966.1 39934690 2690713 complement(1801160..1801480) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1801480 2690713 RPA1620 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946966.1 1801160 R 258594 CDS NP_946967.1 39934691 2692255 1801680..1802552 1 NC_005296.1 hypothetical protein 1802552 2692255 RPA1621 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946967.1 1801680 D 258594 CDS NP_946968.1 39934692 2692295 complement(1802706..1803986) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1803986 2692295 RPA1622 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946968.1 1802706 R 258594 CDS NP_946969.1 39934693 2690743 complement(1804226..1804879) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1804879 2690743 RPA1623 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946969.1 1804226 R 258594 CDS NP_946970.1 39934694 2692367 1804927..1805433 1 NC_005296.1 hypothetical protein 1805433 2692367 RPA1624 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946970.1 1804927 D 258594 CDS NP_946971.1 39934695 2690134 complement(1805442..1806269) 1 NC_005296.1 CysQ protein 1806269 cysQ 2690134 cysQ Rhodopseudomonas palustris CGA009 CysQ protein NP_946971.1 1805442 R 258594 CDS NP_946972.1 39934696 2692410 1806403..1807059 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1807059 2692410 RPA1626 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946972.1 1806403 D 258594 CDS NP_946973.1 39934697 2692408 1807250..1810063 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis histidine kinase CheA 1810063 cheA2 2692408 cheA2 Rhodopseudomonas palustris CGA009 chemotaxis histidine kinase CheA NP_946973.1 1807250 D 258594 CDS NP_946974.1 39934698 2690745 1810060..1810560 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis signal transduction/oligomerization protein CheW2 1810560 cheW2 2690745 cheW2 Rhodopseudomonas palustris CGA009 chemotaxis signal transduction/oligomerization protein CheW2 NP_946974.1 1810060 D 258594 CDS NP_946975.1 39934699 2690769 1810628..1810993 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis response regulator CheY2 1810993 cheY2 2690769 cheY2 Rhodopseudomonas palustris CGA009 chemotaxis response regulator CheY2 NP_946975.1 1810628 D 258594 CDS NP_946976.1 39934700 2692439 1811072..1812247 1 NC_005296.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1812247 cheB2 2692439 cheB2 Rhodopseudomonas palustris CGA009 chemotaxis-specific methylesterase NP_946976.1 1811072 D 258594 CDS NP_946977.1 39934701 2690796 1812244..1813122 1 NC_005296.1 chemotaxis methyltransferase CheR2 1813122 cheR2 2690796 cheR2 Rhodopseudomonas palustris CGA009 chemotaxis methyltransferase CheR2 NP_946977.1 1812244 D 258594 CDS NP_946978.1 39934702 2690820 complement(1813413..1814114) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; two-component cell cycle transcriptional regulatorCtrA 1814114 ctrA 2690820 ctrA Rhodopseudomonas palustris CGA009 two-component cell cycle transcriptional regulatorCtrA NP_946978.1 1813413 R 258594 CDS NP_946979.1 39934703 2690824 1814482..1815807 1 NC_005296.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1815807 fliI 2690824 fliI Rhodopseudomonas palustris CGA009 flagellum-specific ATP synthase NP_946979.1 1814482 D 258594 CDS NP_946980.1 39934704 2690838 1815917..1816345 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; flagellar export FliJ 1816345 2690838 RPA1634 Rhodopseudomonas palustris CGA009 flagellar export FliJ NP_946980.1 1815917 D 258594 CDS NP_946981.1 39934705 2690862 1816522..1817070 1 NC_005296.1 RNA polymerase ECF-type sigma factor 1817070 2690862 RPA1635 Rhodopseudomonas palustris CGA009 RNA polymerase ECF-type sigma factor NP_946981.1 1816522 D 258594 CDS NP_946982.1 39934706 2690872 1817070..1818017 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1818017 2690872 RPA1636 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946982.1 1817070 D 258594 CDS NP_946983.1 39934707 2692503 complement(1818215..1818415) 1 NC_005296.1 hypothetical protein 1818415 2692503 RPA1637 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946983.1 1818215 R 258594 CDS NP_946984.1 39934708 2692550 complement(1818747..1820879) 1 NC_005296.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1820879 flhA 2692550 flhA Rhodopseudomonas palustris CGA009 flagellar biosynthesis protein FlhA NP_946984.1 1818747 R 258594 CDS NP_946985.1 39934709 2690921 1821142..1822386 1 NC_005296.1 major facilitator superfamily protein 1822386 2690921 RPA1639 Rhodopseudomonas palustris CGA009 major facilitator superfamily protein NP_946985.1 1821142 D 258594 CDS NP_946986.1 39934710 2692600 complement(1822478..1824169) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 1824169 2692600 RPA1640 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_946986.1 1822478 R 258594 CDS NP_946987.1 39934711 2689924 1825086..1826006 1 NC_005296.1 AraC family transcriptional regulator 1826006 2689924 RPA1641 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_946987.1 1825086 D 258594 CDS NP_946988.1 39934712 2692650 1826387..1827901 1 NC_005296.1 diguanylate cyclase 1827901 2692650 RPA1642 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_946988.1 1826387 D 258594 CDS NP_946989.1 39934713 2692653 1828098..1828964 1 NC_005296.1 high affinity iron permease FTR1 1828964 2692653 RPA1643 Rhodopseudomonas palustris CGA009 high affinity iron permease FTR1 NP_946989.1 1828098 D 258594 CDS NP_946990.1 39934714 2691027 complement(1828955..1829704) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1829704 2691027 RPA1644 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946990.1 1828955 R 258594 CDS NP_946991.1 39934715 2691063 complement(1829694..1829921) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1829921 2691063 RPA1645 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946991.1 1829694 R 258594 CDS NP_946992.1 39934716 2689883 complement(1830020..1830289) 1 NC_005296.1 hypothetical protein 1830289 2689883 RPA1646 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946992.1 1830020 R 258594 CDS NP_946993.1 39934717 2692696 complement(1830366..1831367) 1 NC_005296.1 alpha/beta hydrolase fold protein 1831367 2692696 RPA1647 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase fold protein NP_946993.1 1830366 R 258594 CDS NP_946994.1 39934718 2692723 1831520..1832782 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; permease 1832782 2692723 RPA1648 Rhodopseudomonas palustris CGA009 permease NP_946994.1 1831520 D 258594 CDS NP_946995.1 39934719 2689007 1832779..1834005 1 NC_005296.1 hypothetical protein 1834005 2689007 RPA1649 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946995.1 1832779 D 258594 CDS NP_946996.1 39934720 2689063 1833998..1834678 1 NC_005296.1 ABC transporter ATP-binding protein 1834678 2689063 RPA1650 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_946996.1 1833998 D 258594 CDS NP_946997.1 39934721 2692757 complement(1834778..1835995) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; leucine/isoleucine/valine-binding protein 1835995 2692757 RPA1651 Rhodopseudomonas palustris CGA009 leucine/isoleucine/valine-binding protein NP_946997.1 1834778 R 258594 CDS NP_946998.1 39934722 2692780 1836597..1837418 1 NC_005296.1 flagellar basal-body rod protein FlgG 1837418 2692780 RPA1652 Rhodopseudomonas palustris CGA009 flagellar basal-body rod protein FlgG NP_946998.1 1836597 D 258594 CDS NP_946999.1 39934723 2690094 complement(1837519..1837917) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1837917 2690094 RPA1653 Rhodopseudomonas palustris CGA009 hypothetical protein NP_946999.1 1837519 R 258594 CDS NP_947000.1 39934724 2691106 complement(1838052..1839065) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; oxido-reductase 1839065 2691106 RPA1654 Rhodopseudomonas palustris CGA009 oxido-reductase NP_947000.1 1838052 R 258594 CDS NP_947001.1 39934725 2691115 complement(1839226..1840434) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter urea/short-chain binding protein 1840434 2691115 RPA1655 Rhodopseudomonas palustris CGA009 ABC transporter urea/short-chain binding protein NP_947001.1 1839226 R 258594 CDS NP_947002.1 39934726 2691120 1840537..1841232 1 NC_005296.1 urease accessory protein 1841232 2691120 RPA1656 Rhodopseudomonas palustris CGA009 urease accessory protein NP_947002.1 1840537 D 258594 CDS NP_947003.1 39934727 2692835 complement(1841261..1842475) 1 NC_005296.1 diguanylate cyclase 1842475 2692835 RPA1657 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_947003.1 1841261 R 258594 CDS NP_947004.1 39934728 2691161 1843254..1843616 1 NC_005296.1 6-pyruvoyl tetrahydrobiopterin synthase 1843616 ptpS 2691161 ptpS Rhodopseudomonas palustris CGA009 6-pyruvoyl tetrahydrobiopterin synthase NP_947004.1 1843254 D 258594 CDS NP_947005.1 39934729 2692878 complement(1843683..1844273) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hemerythrin HHE cation binding protein 1844273 2692878 RPA1659 Rhodopseudomonas palustris CGA009 hemerythrin HHE cation binding protein NP_947005.1 1843683 R 258594 CDS NP_947006.1 39934730 2692887 complement(1844415..1847336) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cation transporting P-type ATPase 1847336 2692887 RPA1660 Rhodopseudomonas palustris CGA009 cation transporting P-type ATPase NP_947006.1 1844415 R 258594 CDS NP_947007.1 39934731 2692921 1847388..1847663 1 NC_005296.1 hypothetical protein 1847663 2692921 RPA1661 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947007.1 1847388 D 258594 CDS NP_947008.1 39934732 2692937 complement(1847694..1848374) 1 NC_005296.1 hypothetical protein 1848374 2692937 RPA1662 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947008.1 1847694 R 258594 CDS NP_947009.1 39934733 2691187 complement(1848482..1849333) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1849333 hpaD 2691187 hpaD Rhodopseudomonas palustris CGA009 3,4-dihydroxyphenylacetate 2,3-dioxygenase NP_947009.1 1848482 R 258594 CDS NP_947010.1 39934734 2691208 complement(1849361..1849903) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glyoxalase/bleomycin resistance protein/dioxygenase 1849903 2691208 RPA1664 Rhodopseudomonas palustris CGA009 glyoxalase/bleomycin resistance protein/dioxygenase NP_947010.1 1849361 R 258594 CDS NP_947011.1 39934735 2692977 complement(1850059..1850361) 1 NC_005296.1 hypothetical protein 1850361 2692977 RPA1665 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947011.1 1850059 R 258594 CDS NP_947012.1 39934736 2693004 complement(1850616..1851965) 1 NC_005296.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1851965 hemN1 2693004 hemN1 Rhodopseudomonas palustris CGA009 coproporphyrinogen III oxidase NP_947012.1 1850616 R 258594 CDS NP_947013.1 39934737 2691207 complement(1851994..1852656) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; bacteriochlorophyll 4-vinyl reductase 1852656 bchJ 2691207 bchJ Rhodopseudomonas palustris CGA009 bacteriochlorophyll 4-vinyl reductase NP_947013.1 1851994 R 258594 CDS NP_947014.1 39934738 2690011 complement(1852676..1854373) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; magnesium-protoporphyrin IX monomethyl ester cyclase 1854373 bchE 2690011 bchE Rhodopseudomonas palustris CGA009 magnesium-protoporphyrin IX monomethyl ester cyclase NP_947014.1 1852676 R 258594 CDS NP_947015.1 39934739 2693039 complement(1854531..1854959) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1854959 2693039 RPA1669 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947015.1 1854531 R 258594 CDS NP_947016.1 39934740 2691223 1855181..1855921 1 NC_005296.1 metallophosphoesterase 1855921 2691223 RPA1670 Rhodopseudomonas palustris CGA009 metallophosphoesterase NP_947016.1 1855181 D 258594 CDS NP_947017.1 39934741 2693088 1855925..1857364 1 NC_005296.1 serine/threonine protein kinase 1857364 2693088 RPA1671 Rhodopseudomonas palustris CGA009 serine/threonine protein kinase NP_947017.1 1855925 D 258594 CDS NP_947018.1 39934742 2689894 complement(1857410..1858060) 1 NC_005296.1 transport-associated protein 1858060 2689894 RPA1672 Rhodopseudomonas palustris CGA009 transport-associated protein NP_947018.1 1857410 R 258594 CDS NP_947019.1 39934743 2689792 1858439..1860790 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphoketolase 1860790 2689792 RPA1673 Rhodopseudomonas palustris CGA009 phosphoketolase NP_947019.1 1858439 D 258594 CDS NP_947020.1 39934744 2689379 1860968..1861471 1 NC_005296.1 response regulator receiver CheY3 1861471 cheY3 2689379 cheY3 Rhodopseudomonas palustris CGA009 response regulator receiver CheY3 NP_947020.1 1860968 D 258594 CDS NP_947021.1 39934745 2690159 1862118..1864268 1 NC_005296.1 methyl-accepting chemotaxis receptor/sensory transducer 1864268 2690159 RPA1675 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_947021.1 1862118 D 258594 CDS NP_947022.1 39934746 2691685 1864447..1867260 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis histidine kinase CheA 1867260 cheA3 2691685 cheA3 Rhodopseudomonas palustris CGA009 chemotaxis histidine kinase CheA NP_947022.1 1864447 D 258594 CDS NP_947023.1 39934747 2691712 1867257..1867757 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis signal transduction/oligomerization protein CheW3 1867757 cheW3 2691712 cheW3 Rhodopseudomonas palustris CGA009 chemotaxis signal transduction/oligomerization protein CheW3 NP_947023.1 1867257 D 258594 CDS NP_947024.1 39934748 2689382 1867811..1868686 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis methyltransferase CheR3 1868686 cheR3 2689382 cheR3 Rhodopseudomonas palustris CGA009 chemotaxis methyltransferase CheR3 NP_947024.1 1867811 D 258594 CDS NP_947025.1 39934749 2689390 1868698..1869012 1 NC_005296.1 hypothetical protein 1869012 2689390 RPA1679 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947025.1 1868698 D 258594 CDS NP_947026.1 39934750 2689539 1869241..1870491 1 NC_005296.1 response regulator and cylclic diguanylate phosphodiesterase 1870491 2689539 RPA1680 Rhodopseudomonas palustris CGA009 response regulator and cylclic diguanylate phosphodiesterase NP_947026.1 1869241 D 258594 CDS NP_947027.1 39934751 2689553 complement(1870522..1873113) 1 NC_005296.1 sensor histidine kinase 1873113 2689553 RPA1681 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_947027.1 1870522 R 258594 CDS NP_947028.1 39934752 2691789 1873536..1874162 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; LuxR family transcriptional regulator 1874162 2691789 RPA1682 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_947028.1 1873536 D 258594 CDS NP_947029.1 39934753 2689902 complement(1874213..1874995) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 1874995 2689902 RPA1683 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_947029.1 1874213 R 258594 CDS NP_947030.1 39934754 2691798 1875104..1875865 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 1875865 2691798 RPA1684 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_947030.1 1875104 D 258594 CDS NP_947031.1 39934755 2689741 1876349..1880449 1 NC_005296.1 serine protease/outer membrane autotransporter 1880449 2689741 RPA1685 Rhodopseudomonas palustris CGA009 serine protease/outer membrane autotransporter NP_947031.1 1876349 D 258594 CDS NP_947032.1 39934756 2691822 complement(1880602..1882206) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glucose-methanol-choline oxidoreductase 1882206 2691822 RPA1686 Rhodopseudomonas palustris CGA009 glucose-methanol-choline oxidoreductase NP_947032.1 1880602 R 258594 CDS NP_947033.1 39934757 2689757 complement(1882277..1883710) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; aldehyde dehydrogenase 1883710 2689757 RPA1687 Rhodopseudomonas palustris CGA009 aldehyde dehydrogenase NP_947033.1 1882277 R 258594 CDS NP_947034.1 39934758 2690098 1884296..1884817 1 NC_005296.1 N-acetyltransferase GCN5 1884817 2690098 RPA1688 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_947034.1 1884296 D 258594 CDS NP_947035.1 39934759 2688786 1885144..1886307 1 NC_005296.1 hypothetical protein 1886307 2688786 RPA1689 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947035.1 1885144 D 258594 CDS NP_947036.1 39934760 2689597 complement(1886304..1886744) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1886744 2689597 RPA1690 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947036.1 1886304 R 258594 CDS NP_947037.1 39934761 2689588 complement(1886876..1888249) 1 NC_005296.1 cation efflux pump 1888249 matE3 2689588 matE3 Rhodopseudomonas palustris CGA009 cation efflux pump NP_947037.1 1886876 R 258594 CDS NP_947038.1 39934762 2689233 1888524..1889759 1 NC_005296.1 major facilitator transporter 1889759 2689233 RPA1692 Rhodopseudomonas palustris CGA009 major facilitator transporter NP_947038.1 1888524 D 258594 CDS NP_947039.1 39934763 2689606 1889961..1890557 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; superoxide dismutase 1890557 sodB 2689606 sodB Rhodopseudomonas palustris CGA009 superoxide dismutase NP_947039.1 1889961 D 258594 CDS NP_947040.1 39934764 2689425 1890635..1891084 1 NC_005296.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1891084 ccrB 2689425 ccrB Rhodopseudomonas palustris CGA009 camphor resistance protein CrcB NP_947040.1 1890635 D 258594 CDS NP_947041.1 39934765 2691647 complement(1891147..1892007) 1 NC_005296.1 cupin 1892007 2691647 RPA1695 Rhodopseudomonas palustris CGA009 cupin NP_947041.1 1891147 R 258594 CDS NP_947042.1 39934766 2693128 1892427..1893062 1 NC_005296.1 hypothetical protein 1893062 2693128 RPA1696 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947042.1 1892427 D 258594 CDS NP_947043.1 39934767 2691661 complement(1893265..1893807) 1 NC_005296.1 competence-damaged protein 1893807 2691661 RPA1697 Rhodopseudomonas palustris CGA009 competence-damaged protein NP_947043.1 1893265 R 258594 CDS NP_947044.1 39934768 2688766 complement(1893871..1894614) 1 NC_005296.1 hypothetical protein 1894614 2688766 RPA1698 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947044.1 1893871 R 258594 CDS NP_947045.1 39934769 2689486 1894760..1896547 1 NC_005296.1 acyl-CoA dehydrogenase 1896547 2689486 RPA1699 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_947045.1 1894760 D 258594 CDS NP_947046.1 39934770 2689336 complement(1896682..1898184) 1 NC_005296.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1898184 2689336 RPA1700 Rhodopseudomonas palustris CGA009 amidase NP_947046.1 1896682 R 258594 CDS NP_947047.1 39934771 2689277 complement(1898566..1899336) 1 NC_005296.1 hypothetical protein 1899336 2689277 RPA1701 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947047.1 1898566 R 258594 CDS NP_947048.1 39934772 2689475 complement(1899531..1901087) 1 NC_005296.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1901087 2689475 RPA1702 Rhodopseudomonas palustris CGA009 long-chain-fatty-acid--CoA ligase NP_947048.1 1899531 R 258594 CDS NP_947049.1 39934773 2691676 complement(1901366..1902541) 1 NC_005296.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1902541 2691676 RPA1703 Rhodopseudomonas palustris CGA009 acetyl-CoA acetyltransferase NP_947049.1 1901366 R 258594 CDS NP_947050.1 39934774 2691361 1902643..1903350 1 NC_005296.1 TetR family transcriptional regulator 1903350 2691361 RPA1704 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_947050.1 1902643 D 258594 CDS NP_947051.1 39934775 2689350 1903489..1904565 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-hydroxyacyl-CoA dehydrogenase 1904565 2689350 RPA1705 Rhodopseudomonas palustris CGA009 3-hydroxyacyl-CoA dehydrogenase NP_947051.1 1903489 D 258594 CDS NP_947052.1 39934776 2689644 1904789..1905595 1 NC_005296.1 enoyl-CoA hydratase 1905595 2689644 RPA1706 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_947052.1 1904789 D 258594 CDS NP_947053.1 39934777 2691654 1905646..1907520 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA synthetase 1907520 fcs1 2691654 fcs1 Rhodopseudomonas palustris CGA009 acyl-CoA synthetase NP_947053.1 1905646 D 258594 CDS NP_947054.1 39934778 2689177 1907687..1908814 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 1908814 2689177 RPA1708 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_947054.1 1907687 D 258594 CDS NP_947055.1 39934779 2689193 1908951..1910198 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 1910198 2689193 RPA1709 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_947055.1 1908951 D 258594 CDS NP_947056.1 39934780 2691370 1910349..1911593 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 1911593 2691370 RPA1710 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_947056.1 1910349 D 258594 CDS NP_947057.1 39934781 2689231 1911756..1912454 1 NC_005296.1 nitroreductase 1912454 pnbA 2689231 pnbA Rhodopseudomonas palustris CGA009 nitroreductase NP_947057.1 1911756 D 258594 CDS NP_947058.1 39934782 2689174 complement(1912856..1913638) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; enoyl-CoA hydratase 1913638 2689174 RPA1712 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_947058.1 1912856 R 258594 CDS NP_947059.1 39934783 2693127 1913941..1914615 1 NC_005296.1 cyclic nucleotide-binding protein 1914615 2693127 RPA1713 Rhodopseudomonas palustris CGA009 cyclic nucleotide-binding protein NP_947059.1 1913941 D 258594 CDS NP_947060.1 39934784 2693136 1914669..1915511 1 NC_005296.1 hypothetical protein 1915511 2693136 RPA1714 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947060.1 1914669 D 258594 CDS NP_947061.1 39934785 2689650 1915666..1916166 1 NC_005296.1 hypothetical protein 1916166 2689650 RPA1715 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947061.1 1915666 D 258594 CDS NP_947062.1 39934786 2693117 1916440..1918650 1 NC_005296.1 diguanylate cyclase 1918650 2693117 RPA1716 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_947062.1 1916440 D 258594 CDS NP_947063.1 39934787 2689481 complement(1918857..1919243) 1 NC_005296.1 hypothetical protein 1919243 2689481 RPA1717 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947063.1 1918857 R 258594 CDS NP_947064.1 39934788 2689273 1919490..1919897 1 NC_005296.1 hypothetical protein 1919897 2689273 RPA1718 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947064.1 1919490 D 258594 CDS NP_947065.1 39934789 2689269 complement(1919904..1920236) 1 NC_005296.1 hypothetical protein 1920236 2689269 RPA1719 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947065.1 1919904 R 258594 CDS NP_947066.1 39934790 2689470 complement(1920300..1920920) 1 NC_005296.1 hypothetical protein 1920920 2689470 RPA1720 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947066.1 1920300 R 258594 CDS NP_947067.1 39934791 2689646 1921022..1921939 1 NC_005296.1 LysR family transcriptional regulator 1921939 2689646 RPA1721 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_947067.1 1921022 D 258594 CDS NP_947068.1 39934792 2689525 1921936..1922586 1 NC_005296.1 alkylated DNA repair protein 1922586 alkB 2689525 alkB Rhodopseudomonas palustris CGA009 alkylated DNA repair protein NP_947068.1 1921936 D 258594 CDS NP_947069.1 39934793 2689489 complement(1922593..1923924) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phenylacetyl-CoA ligase 1923924 paaK 2689489 paaK Rhodopseudomonas palustris CGA009 phenylacetyl-CoA ligase NP_947069.1 1922593 R 258594 CDS NP_947070.1 39934794 2691674 complement(1923939..1924412) 1 NC_005296.1 phenylacetic acid degredation protein 1924412 paaI 2691674 paaI Rhodopseudomonas palustris CGA009 phenylacetic acid degredation protein NP_947070.1 1923939 R 258594 CDS NP_947071.1 39934795 2689220 1924637..1926676 1 NC_005296.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 1926676 2689220 RPA1725 Rhodopseudomonas palustris CGA009 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase NP_947071.1 1924637 D 258594 CDS NP_947072.1 39934796 2689459 1926733..1927749 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; oxidoreductase 1927749 2689459 RPA1726 Rhodopseudomonas palustris CGA009 oxidoreductase NP_947072.1 1926733 D 258594 CDS NP_947073.1 39934797 2689620 1927991..1928728 1 NC_005296.1 hypothetical protein 1928728 2689620 RPA1727 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947073.1 1927991 D 258594 CDS NP_947074.1 39934798 2689578 complement(1929247..1933506) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1933506 2689578 RPA1728 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947074.1 1929247 R 258594 CDS NP_947075.1 39934799 2691650 complement(1934248..1935210) 1 NC_005296.1 fatty acid desaturase 1935210 2691650 RPA1729 Rhodopseudomonas palustris CGA009 fatty acid desaturase NP_947075.1 1934248 R 258594 CDS NP_947076.1 39934800 2689482 complement(1935263..1936486) 1 NC_005296.1 OsmC-like protein 1936486 2689482 RPA1730 Rhodopseudomonas palustris CGA009 OsmC-like protein NP_947076.1 1935263 R 258594 CDS NP_947077.1 39934801 2689652 complement(1936665..1937330) 1 NC_005296.1 molybdopterin oxidoreductase 1937330 2689652 RPA1731 Rhodopseudomonas palustris CGA009 molybdopterin oxidoreductase NP_947077.1 1936665 R 258594 CDS NP_947078.1 39934802 2689608 complement(1937353..1938552) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome P450 1938552 2689608 RPA1732 Rhodopseudomonas palustris CGA009 cytochrome P450 NP_947078.1 1937353 R 258594 CDS NP_947079.1 39934803 2689580 complement(1938621..1938848) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ferredoxin 1938848 fdxA 2689580 fdxA Rhodopseudomonas palustris CGA009 ferredoxin NP_947079.1 1938621 R 258594 CDS NP_947080.1 39934804 2691648 complement(1938948..1940381) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; amidotransferase 1940381 2691648 RPA1734 Rhodopseudomonas palustris CGA009 amidotransferase NP_947080.1 1938948 R 258594 CDS NP_947081.1 39934805 2689582 complement(1941645..1943021) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-glucosidase 1943021 bglA 2689582 bglA Rhodopseudomonas palustris CGA009 beta-glucosidase NP_947081.1 1941645 R 258594 CDS NP_947082.1 39934806 2693145 complement(1943207..1943986) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short chain dehydrogenase 1943986 2693145 RPA1737 Rhodopseudomonas palustris CGA009 short chain dehydrogenase NP_947082.1 1943207 R 258594 CDS NP_947083.1 39934807 2689601 complement(1944029..1945513) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system ATPase 1945513 2689601 RPA1738 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATPase NP_947083.1 1944029 R 258594 CDS NP_947084.1 39934808 2689205 complement(1945513..1946436) 1 NC_005296.1 branched-chain amino acid transport system permease 1946436 2689205 RPA1739 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system permease NP_947084.1 1945513 R 258594 CDS NP_947085.1 39934809 2690099 complement(1946438..1947313) 1 NC_005296.1 branched chain amino acid ABC transporter permease 1947313 2690099 RPA1740 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter permease NP_947085.1 1946438 R 258594 CDS NP_947086.1 39934810 2689893 complement(1947510..1948760) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino-acid ABC transporter substrate-binding protein 1948760 2689893 RPA1741 Rhodopseudomonas palustris CGA009 branched chain amino-acid ABC transporter substrate-binding protein NP_947086.1 1947510 R 258594 CDS NP_947087.1 39934811 2691904 1948929..1950047 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; tartrate dehydrogenase 1950047 yeaU 2691904 yeaU Rhodopseudomonas palustris CGA009 tartrate dehydrogenase NP_947087.1 1948929 D 258594 CDS NP_947088.1 39934812 2690004 complement(1950081..1950920) 1 NC_005296.1 hypothetical protein 1950920 2690004 RPA1743 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947088.1 1950081 R 258594 CDS NP_947089.1 39934813 2689748 complement(1951061..1951975) 1 NC_005296.1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1951975 serA 2689748 serA Rhodopseudomonas palustris CGA009 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase NP_947089.1 1951061 R 258594 CDS NP_947090.1 39934814 2691804 complement(1952010..1953260) 1 NC_005296.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1953260 2691804 RPA1745 Rhodopseudomonas palustris CGA009 allantoate amidohydrolase NP_947090.1 1952010 R 258594 CDS NP_947091.1 39934815 2689715 complement(1953330..1954280) 1 NC_005296.1 LysR family transcriptional regulator 1954280 2689715 RPA1746 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_947091.1 1953330 R 258594 CDS NP_947092.1 39934816 2689568 1954396..1955214 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1955214 2689568 RPA1747 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947092.1 1954396 D 258594 CDS NP_947093.1 39934817 2691793 1955272..1956519 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system substrate-binding protein 1956519 2691793 RPA1748 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system substrate-binding protein NP_947093.1 1955272 D 258594 CDS NP_947094.1 39934818 2691779 1956692..1957525 1 NC_005296.1 inner-membrane translocator 1957525 2691779 RPA1749 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_947094.1 1956692 D 258594 CDS NP_947095.1 39934819 2689564 1957525..1958511 1 NC_005296.1 inner-membrane translocator 1958511 2689564 RPA1750 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_947095.1 1957525 D 258594 CDS NP_947096.1 39934820 2689534 1958508..1959242 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter ATP-binding protein 1959242 2689534 RPA1751 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_947096.1 1958508 D 258594 CDS NP_947097.1 39934821 2691718 1959226..1959930 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter ATP-binding protein 1959930 2691718 RPA1752 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_947097.1 1959226 D 258594 CDS NP_947098.1 39934822 2690334 1960124..1960903 1 NC_005296.1 hypothetical protein 1960903 2690334 RPA1753 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947098.1 1960124 D 258594 CDS NP_947099.1 39934823 2691692 1961116..1964310 1 NC_005296.1 cation efflux system protein 1964310 ragC 2691692 ragC Rhodopseudomonas palustris CGA009 cation efflux system protein NP_947099.1 1961116 D 258594 CDS NP_947100.1 39934824 2691260 1964300..1965502 1 NC_005296.1 cation efflux pump HlyD 1965502 ragD 2691260 ragD Rhodopseudomonas palustris CGA009 cation efflux pump HlyD NP_947100.1 1964300 D 258594 CDS NP_947101.1 39934825 2690163 complement(1965670..1967184) 1 NC_005296.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1967184 2690163 RPA1756 Rhodopseudomonas palustris CGA009 acetyl-CoA acetyltransferase NP_947101.1 1965670 R 258594 CDS NP_947102.1 39934826 2690154 complement(1967224..1968003) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; oxoacyl carrier protein reductase 1968003 2690154 RPA1757 Rhodopseudomonas palustris CGA009 oxoacyl carrier protein reductase NP_947102.1 1967224 R 258594 CDS NP_947103.1 39934827 2689684 1968171..1968971 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1968971 2689684 RPA1758 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_947103.1 1968171 D 258594 CDS NP_947104.1 39934828 2690288 1968979..1969974 1 NC_005296.1 tyrosine protein kinase:aminoglycoside phosphotransferase 1969974 2690288 RPA1759 Rhodopseudomonas palustris CGA009 tyrosine protein kinase:aminoglycoside phosphotransferase NP_947104.1 1968979 D 258594 CDS NP_947105.1 39934829 2690298 1969993..1970367 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1970367 2690298 RPA1760 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947105.1 1969993 D 258594 CDS NP_947106.1 39934830 2693078 complement(1970699..1971478) 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1971478 2693078 RPA1761 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_947106.1 1970699 R 258594 CDS NP_947107.1 39934831 2693072 1971547..1972878 1 NC_005296.1 acyl-CoA dehydrogenase 1972878 2693072 RPA1762 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_947107.1 1971547 D 258594 CDS NP_947108.1 39934832 2693055 complement(1973251..1974828) 1 NC_005296.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1974828 2693055 RPA1763 Rhodopseudomonas palustris CGA009 long-chain-fatty-acid--CoA ligase NP_947108.1 1973251 R 258594 CDS NP_947109.1 39934833 2693030 complement(1975165..1976037) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 1976037 2693030 RPA1764 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_947109.1 1975165 R 258594 CDS NP_947110.1 39934834 2690015 1976145..1976957 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1976957 2690015 RPA1765 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_947110.1 1976145 D 258594 CDS NP_947111.1 39934835 2691219 1977106..1978650 1 NC_005296.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1978650 2691219 RPA1766 Rhodopseudomonas palustris CGA009 long-chain-fatty-acid--CoA ligase NP_947111.1 1977106 D 258594 CDS NP_947112.1 39934836 2691217 complement(1978647..1980956) 1 NC_005296.1 sensor histidine kinase/response regulator 1980956 2691217 RPA1767 Rhodopseudomonas palustris CGA009 sensor histidine kinase/response regulator NP_947112.1 1978647 R 258594 CDS NP_947113.1 39934837 2692978 complement(1981208..1981402) 1 NC_005296.1 hypothetical protein 1981402 2692978 RPA1768 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947113.1 1981208 R 258594 CDS NP_947114.1 39934838 2690046 complement(1981608..1982498) 1 NC_005296.1 LysR family transcriptional regulator 1982498 2690046 RPA1769 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_947114.1 1981608 R 258594 CDS NP_947115.1 39934839 2692965 complement(1982495..1983559) 1 NC_005296.1 hypothetical protein 1983559 2692965 RPA1770 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947115.1 1982495 R 258594 CDS NP_947116.1 39934840 2692945 1983838..1984620 1 NC_005296.1 hypothetical protein 1984620 2692945 RPA1771 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947116.1 1983838 D 258594 CDS NP_947117.1 39934841 2692915 1984721..1987531 1 NC_005296.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 1987531 ppc 2692915 ppc Rhodopseudomonas palustris CGA009 phosphoenolpyruvate carboxylase NP_947117.1 1984721 D 258594 CDS NP_947118.1 39934842 2692893 1987669..1987998 1 NC_005296.1 DMT family permease 1987998 2692893 RPA1773 Rhodopseudomonas palustris CGA009 DMT family permease NP_947118.1 1987669 D 258594 CDS NP_947119.1 39934843 2691162 1988407..1989732 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; porin 1989732 2691162 RPA1774 Rhodopseudomonas palustris CGA009 porin NP_947119.1 1988407 D 258594 CDS NP_947120.1 39934844 2692830 complement(1989978..1990892) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; dehydrogenase 1990892 2692830 RPA1775 Rhodopseudomonas palustris CGA009 dehydrogenase NP_947120.1 1989978 R 258594 CDS NP_947121.1 39934845 2692821 complement(1991177..1992316) 1 NC_005296.1 lipid transfer protein 1992316 2692821 RPA1776 Rhodopseudomonas palustris CGA009 lipid transfer protein NP_947121.1 1991177 R 258594 CDS NP_947122.1 39934846 2692809 complement(1992322..1992735) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 1992735 2692809 RPA1777 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947122.1 1992322 R 258594 CDS NP_947123.1 39934847 2691114 1993022..1994380 1 NC_005296.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1994380 2691114 RPA1778 Rhodopseudomonas palustris CGA009 amidase NP_947123.1 1993022 D 258594 CDS NP_947124.1 39934848 2691900 1994373..1995059 1 NC_005296.1 hypothetical protein 1995059 2691900 RPA1779 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947124.1 1994373 D 258594 CDS NP_947125.1 39934849 2691108 complement(1995247..1995837) 1 NC_005296.1 phenylacetic acid degradation-like protein 1995837 2691108 RPA1780 Rhodopseudomonas palustris CGA009 phenylacetic acid degradation-like protein NP_947125.1 1995247 R 258594 CDS NP_947126.1 39934850 2690091 complement(1996035..1997207) 1 NC_005296.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 1997207 phbH 2690091 phbH Rhodopseudomonas palustris CGA009 4-hydroxybenzoate 3-monooxygenase NP_947126.1 1996035 R 258594 CDS NP_947127.1 39934851 2688858 1997376..1998386 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TRAP dicarboxylate family transporter subunit DctP 1998386 2688858 RPA1782 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctP NP_947127.1 1997376 D 258594 CDS NP_947128.1 39934852 2690320 1998472..1999125 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctQ 1999125 2690320 RPA1783 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctQ NP_947128.1 1998472 D 258594 CDS NP_947129.1 39934853 2689015 1999132..2000439 1 NC_005296.1 TRAP dicarboxylate family transporter DctM subunit 2000439 2689015 RPA1784 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter DctM subunit NP_947129.1 1999132 D 258594 CDS NP_947130.1 39934854 2689051 2000607..2001068 1 NC_005296.1 hypothetical protein 2001068 2689051 RPA1785 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947130.1 2000607 D 258594 CDS NP_947131.1 39934855 2689034 2001366..2002172 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2002172 2689034 RPA1786 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_947131.1 2001366 D 258594 CDS NP_947132.1 39934856 2692733 2002181..2004079 1 NC_005296.1 catalyzes the conversion of ferulic acid to feruloyl-CoA; feruloyl-CoA synthase 2004079 fcs2 2692733 fcs2 Rhodopseudomonas palustris CGA009 feruloyl-CoA synthase NP_947132.1 2002181 D 258594 CDS NP_947133.1 39934857 2692725 2004318..2004737 1 NC_005296.1 4-hydroxybenzoyl-CoA thioesterase 2004737 2692725 RPA1788 Rhodopseudomonas palustris CGA009 4-hydroxybenzoyl-CoA thioesterase NP_947133.1 2004318 D 258594 CDS NP_947134.1 39934858 2692709 2004817..2005974 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system substrate-binding protein 2005974 2692709 RPA1789 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system substrate-binding protein NP_947134.1 2004817 D 258594 CDS NP_947135.1 39934859 2691077 2006289..2007107 1 NC_005296.1 diguanylate cyclase 2007107 2691077 RPA1790 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_947135.1 2006289 D 258594 CDS NP_947136.1 39934860 2690211 complement(2007080..2007799) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system ATP-binding protein 2007799 2690211 RPA1791 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_947136.1 2007080 R 258594 CDS NP_947137.1 39934861 2691048 complement(2007796..2009568) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system ATP-binding protein 2009568 2691048 RPA1792 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_947137.1 2007796 R 258594 CDS NP_947138.1 39934862 2692673 complement(2009574..2010614) 1 NC_005296.1 branched-chain amino acid transport system permease 2010614 2692673 RPA1793 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system permease NP_947138.1 2009574 R 258594 CDS NP_947139.1 39934863 2692658 2010746..2011297 1 NC_005296.1 MarR family transcriptional regulator 2011297 2692658 RPA1794 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_947139.1 2010746 D 258594 CDS NP_947140.1 39934864 2692641 complement(2011435..2013261) 1 NC_005296.1 potassium-efflux system protein 2013261 2692641 RPA1795 Rhodopseudomonas palustris CGA009 potassium-efflux system protein NP_947140.1 2011435 R 258594 CDS NP_947141.1 39934865 2690969 2013917..2015491 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; adenylate/guanylate cyclase 2015491 2690969 RPA1796 Rhodopseudomonas palustris CGA009 adenylate/guanylate cyclase NP_947141.1 2013917 D 258594 CDS NP_947142.1 39934866 2692609 complement(2015733..2017013) 1 NC_005296.1 hypothetical protein 2017013 2692609 RPA1797 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947142.1 2015733 R 258594 CDS NP_947143.1 39934867 2690959 complement(2017212..2018447) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter periplasmic binding protein 2018447 2690959 RPA1798 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter periplasmic binding protein NP_947143.1 2017212 R 258594 CDS NP_947144.1 39934868 2690079 complement(2018690..2020177) 1 NC_005296.1 uracil-DNA glycosylase 2020177 ung 2690079 ung Rhodopseudomonas palustris CGA009 uracil-DNA glycosylase NP_947144.1 2018690 R 258594 CDS NP_947145.1 39934869 2690949 complement(2020274..2021524) 1 NC_005296.1 elongator protein 3/MiaB/NifB 2021524 2690949 RPA1800 Rhodopseudomonas palustris CGA009 elongator protein 3/MiaB/NifB NP_947145.1 2020274 R 258594 CDS NP_947146.1 39934870 2692590 2021694..2022479 1 NC_005296.1 hypothetical protein 2022479 2692590 RPA1801 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947146.1 2021694 D 258594 CDS NP_947147.1 39934871 2690941 2022532..2023968 1 NC_005296.1 hypothetical protein 2023968 2690941 RPA1802 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947147.1 2022532 D 258594 CDS NP_947148.1 39934872 2692528 2024122..2027709 1 NC_005296.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 2027709 dnaE2 2692528 dnaE2 Rhodopseudomonas palustris CGA009 error-prone DNA polymerase NP_947148.1 2024122 D 258594 CDS NP_947149.1 39934873 2692566 complement(2027715..2028668) 1 NC_005296.1 hypothetical protein 2028668 2692566 RPA1804 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947149.1 2027715 R 258594 CDS NP_947150.1 39934874 2692547 2028745..2029695 1 NC_005296.1 LysR family transcriptional regulator 2029695 2692547 RPA1805 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_947150.1 2028745 D 258594 CDS NP_947151.1 39934875 2692530 2029742..2031139 1 NC_005296.1 L-carnitine dehydratase/bile acid-inducible protein F 2031139 2692530 RPA1806 Rhodopseudomonas palustris CGA009 L-carnitine dehydratase/bile acid-inducible protein F NP_947151.1 2029742 D 258594 CDS NP_947152.1 39934876 2692519 2031359..2032597 1 NC_005296.1 HlyD family heavy metal efflux protein 2032597 2692519 RPA1807 Rhodopseudomonas palustris CGA009 HlyD family heavy metal efflux protein NP_947152.1 2031359 D 258594 CDS NP_947153.1 39934877 2692499 2032754..2035876 1 NC_005296.1 RND divalent metal cation efflux transporter CzcA 2035876 czcA1 2692499 czcA1 Rhodopseudomonas palustris CGA009 RND divalent metal cation efflux transporter CzcA NP_947153.1 2032754 D 258594 CDS NP_947154.1 39934878 2690879 2036076..2036393 1 NC_005296.1 hypothetical protein 2036393 2690879 RPA1809 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947154.1 2036076 D 258594 CDS NP_947155.1 39934879 2690878 complement(2036488..2037930) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane protein 2037930 2690878 RPA1810 Rhodopseudomonas palustris CGA009 outer membrane protein NP_947155.1 2036488 R 258594 CDS NP_947156.1 39934880 2690868 complement(2038105..2038884) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; enoyl-CoA hydratase 2038884 2690868 RPA1811 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_947156.1 2038105 R 258594 CDS NP_947157.1 39934881 2690856 complement(2038968..2039705) 1 NC_005296.1 hypothetical protein 2039705 2690856 RPA1812 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947157.1 2038968 R 258594 CDS NP_947158.1 39934882 2690845 2039897..2040505 1 NC_005296.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2040505 2690845 RPA1813 Rhodopseudomonas palustris CGA009 RNA polymerase sigma factor NP_947158.1 2039897 D 258594 CDS NP_947159.1 39934883 2690827 2040502..2041146 1 NC_005296.1 hypothetical protein 2041146 2690827 RPA1814 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947159.1 2040502 D 258594 CDS NP_947160.1 39934884 2692470 2041227..2041607 1 NC_005296.1 hypothetical protein 2041607 2692470 RPA1815 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947160.1 2041227 D 258594 CDS NP_947161.1 39934885 2690797 2041668..2043896 1 NC_005296.1 outer membrane receptor for iron transport 2043896 2690797 RPA1816 Rhodopseudomonas palustris CGA009 outer membrane receptor for iron transport NP_947161.1 2041668 D 258594 CDS NP_947162.1 39934886 2690763 complement(2043919..2045028) 1 NC_005296.1 hypothetical protein 2045028 2690763 RPA1817 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947162.1 2043919 R 258594 CDS NP_947163.1 39934887 2690755 complement(2045066..2046355) 1 NC_005296.1 diguanylate cyclase 2046355 2690755 RPA1818 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_947163.1 2045066 R 258594 CDS NP_947164.1 39934888 2692424 2046600..2047169 1 NC_005296.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2047169 2692424 RPA1819 Rhodopseudomonas palustris CGA009 RNA polymerase sigma factor NP_947164.1 2046600 D 258594 CDS NP_947165.1 39934889 2692415 2047166..2047999 1 NC_005296.1 hypothetical protein 2047999 2692415 RPA1820 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947165.1 2047166 D 258594 CDS NP_947166.1 39934890 2690742 2048486..2048995 1 NC_005296.1 hypothetical protein 2048995 2690742 RPA1821 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947166.1 2048486 D 258594 CDS NP_947167.1 39934891 2692395 2049434..2051500 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 2051500 2692395 RPA1822 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_947167.1 2049434 D 258594 CDS NP_947168.1 39934892 2691869 2051982..2054615 1 NC_005296.1 TonB dependent receptor 2054615 2691869 RPA1823 Rhodopseudomonas palustris CGA009 TonB dependent receptor NP_947168.1 2051982 D 258594 CDS NP_947169.1 39934893 2690100 2054711..2055226 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2055226 2690100 RPA1824 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947169.1 2054711 D 258594 CDS NP_947170.1 39934894 2690727 complement(2055318..2055557) 1 NC_005296.1 type IV pilus assembly PilZ 2055557 2690727 RPA1825 Rhodopseudomonas palustris CGA009 type IV pilus assembly PilZ NP_947170.1 2055318 R 258594 CDS NP_947171.1 39934895 2689831 complement(2055690..2057048) 1 NC_005296.1 hypothetical protein 2057048 2689831 RPA1826 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947171.1 2055690 R 258594 CDS NP_947172.1 39934896 2691843 complement(2057154..2057414) 1 NC_005296.1 hypothetical protein 2057414 2691843 RPA1827 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947172.1 2057154 R 258594 CDS NP_947173.1 39934897 2689939 complement(2057481..2058131) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase C15 pyroglutamyl peptidase I 2058131 2689939 RPA1828 Rhodopseudomonas palustris CGA009 peptidase C15 pyroglutamyl peptidase I NP_947173.1 2057481 R 258594 CDS NP_947174.1 39934898 2690012 complement(2058128..2059117) 1 NC_005296.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 2059117 argK 2690012 argK Rhodopseudomonas palustris CGA009 arginine/ornithine transport system ATPase NP_947174.1 2058128 R 258594 CDS NP_947175.1 39934899 2690199 complement(2059204..2059533) 1 NC_005296.1 hypothetical protein 2059533 2690199 RPA1830 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947175.1 2059204 R 258594 CDS NP_947176.1 39934900 2692282 complement(2059524..2059796) 1 NC_005296.1 hypothetical protein 2059796 2692282 RPA1831 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947176.1 2059524 R 258594 CDS NP_947177.1 39934901 2692281 complement(2059995..2060753) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2060753 2692281 RPA1832 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947177.1 2059995 R 258594 CDS NP_947178.1 39934902 2692267 complement(2060841..2061242) 1 NC_005296.1 twitching motility protein PilT 2061242 2692267 RPA1833 Rhodopseudomonas palustris CGA009 twitching motility protein PilT NP_947178.1 2060841 R 258594 CDS NP_947179.1 39934903 2690716 complement(2061248..2061505) 1 NC_005296.1 hypothetical protein 2061505 2690716 RPA1834 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947179.1 2061248 R 258594 CDS NP_947180.1 39934904 2692235 complement(2061569..2063728) 1 NC_005296.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 2063728 mutB 2692235 mutB Rhodopseudomonas palustris CGA009 methylmalonyl-CoA mutase NP_947180.1 2061569 R 258594 CDS NP_947181.1 39934905 2690712 complement(2063791..2064255) 1 NC_005296.1 glutathione-dependent formaldehyde-activating protein 2064255 2690712 RPA1836 Rhodopseudomonas palustris CGA009 glutathione-dependent formaldehyde-activating protein NP_947181.1 2063791 R 258594 CDS NP_947182.1 39934906 2692221 complement(2064252..2066123) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methylmalonyl-CoA mutase 2066123 2692221 RPA1837 Rhodopseudomonas palustris CGA009 methylmalonyl-CoA mutase NP_947182.1 2064252 R 258594 CDS NP_947183.1 39934907 2692201 complement(2066281..2066772) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2066772 folK 2692201 folK Rhodopseudomonas palustris CGA009 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase NP_947183.1 2066281 R 258594 CDS NP_947184.1 39934908 2692197 complement(2066774..2067139) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; dihydroneopterin aldolase 2067139 folB 2692197 folB Rhodopseudomonas palustris CGA009 dihydroneopterin aldolase NP_947184.1 2066774 R 258594 CDS NP_947185.1 39934909 2692184 complement(2067136..2067993) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; dihydropteroate synthase 2067993 folP 2692184 folP Rhodopseudomonas palustris CGA009 dihydropteroate synthase NP_947185.1 2067136 R 258594 CDS NP_947186.1 39934910 2690665 complement(2068059..2068466) 1 NC_005296.1 hypothetical protein 2068466 2690665 RPA1841 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947186.1 2068059 R 258594 CDS NP_947187.1 39934911 2690649 complement(2068484..2068852) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2068852 2690649 RPA1842 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947187.1 2068484 R 258594 CDS NP_947188.1 39934912 2692156 2069189..2070799 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2070799 2692156 RPA1843 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947188.1 2069189 D 258594 CDS NP_947189.1 39934913 2690632 2071008..2072414 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2072414 2690632 RPA1844 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947189.1 2071008 D 258594 CDS NP_947190.1 39934914 2690620 2072749..2075049 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; tonB-dependent receptor protein 2075049 2690620 RPA1845 Rhodopseudomonas palustris CGA009 tonB-dependent receptor protein NP_947190.1 2072749 D 258594 CDS NP_947191.1 39934915 2690177 2075163..2075897 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2075897 2690177 RPA1846 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947191.1 2075163 D 258594 CDS NP_947192.1 39934916 2692131 2075894..2076175 1 NC_005296.1 hypothetical protein 2076175 2692131 RPA1847 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947192.1 2075894 D 258594 CDS NP_947193.1 39934917 2692129 2076237..2077811 1 NC_005296.1 hypothetical protein 2077811 2692129 RPA1848 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947193.1 2076237 D 258594 CDS NP_947194.1 39934918 2690549 2077808..2078095 1 NC_005296.1 hypothetical protein 2078095 2690549 RPA1849 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947194.1 2077808 D 258594 CDS NP_947195.1 39934919 2690283 complement(2078135..2080132) 1 NC_005296.1 methyl-accepting chemotaxis receptor/sensory transducer 2080132 2690283 RPA1850 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_947195.1 2078135 R 258594 CDS NP_947196.1 39934920 2692057 complement(2080588..2081661) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; aldolase II superfamily protein 2081661 2692057 RPA1851 Rhodopseudomonas palustris CGA009 aldolase II superfamily protein NP_947196.1 2080588 R 258594 CDS NP_947197.1 39934921 2692049 2082702..2083118 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; MucR family transcriptional regulator 2083118 mucR 2692049 mucR Rhodopseudomonas palustris CGA009 MucR family transcriptional regulator NP_947197.1 2082702 D 258594 CDS NP_947198.1 39934922 2692023 complement(2083126..2083866) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase 2083866 2692023 RPA1853 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase NP_947198.1 2083126 R 258594 CDS NP_947199.1 39934923 2690506 2083944..2084579 1 NC_005296.1 TetR family transcriptional regulator 2084579 2690506 RPA1854 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_947199.1 2083944 D 258594 CDS NP_947200.1 39934924 2690492 2084701..2085312 1 NC_005296.1 hypothetical protein 2085312 2690492 RPA1855 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947200.1 2084701 D 258594 CDS NP_947201.1 39934925 2690478 complement(2085342..2085770) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Fe-S metabolism associated SufE 2085770 2690478 RPA1856 Rhodopseudomonas palustris CGA009 Fe-S metabolism associated SufE NP_947201.1 2085342 R 258594 CDS NP_947202.1 39934926 2690181 complement(2085886..2086308) 1 NC_005296.1 hypothetical protein 2086308 2690181 RPA1857 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947202.1 2085886 R 258594 CDS NP_947203.1 39934927 2690174 2086715..2088547 1 NC_005296.1 sensor histidine kinase 2088547 2690174 RPA1858 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_947203.1 2086715 D 258594 CDS NP_947204.1 39934928 2690452 2088540..2089325 1 NC_005296.1 peptidoglycan-binding domain 1 2089325 2690452 RPA1859 Rhodopseudomonas palustris CGA009 peptidoglycan-binding domain 1 NP_947204.1 2088540 D 258594 CDS NP_947205.1 39934929 2690443 2089478..2089819 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2089819 2690443 RPA1860 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947205.1 2089478 D 258594 CDS NP_947206.1 39934930 2690411 complement(2089994..2090968) 1 NC_005296.1 hypothetical protein 2090968 2690411 RPA1861 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947206.1 2089994 R 258594 CDS NP_947207.1 39934931 2690403 complement(2091120..2092193) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; polysaccharide deacetylase 2092193 2690403 RPA1862 Rhodopseudomonas palustris CGA009 polysaccharide deacetylase NP_947207.1 2091120 R 258594 CDS NP_947208.1 39934932 2691996 complement(2092273..2092803) 1 NC_005296.1 hypothetical protein 2092803 2691996 RPA1863 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947208.1 2092273 R 258594 CDS NP_947209.1 39934933 2690372 2093201..2093983 1 NC_005296.1 hypothetical protein 2093983 2690372 RPA1864 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947209.1 2093201 D 258594 CDS NP_947210.1 39934934 2691432 complement(2093990..2094556) 1 NC_005296.1 hypothetical protein 2094556 2691432 RPA1865 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947210.1 2093990 R 258594 CDS NP_947211.1 39934935 2691967 complement(2094553..2095131) 1 NC_005296.1 hypothetical protein 2095131 2691967 RPA1866 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947211.1 2094553 R 258594 CDS NP_947212.1 39934936 2691309 complement(2095175..2097448) 1 NC_005296.1 penicillin-binding protein 1A 2097448 2691309 RPA1867 Rhodopseudomonas palustris CGA009 penicillin-binding protein 1A NP_947212.1 2095175 R 258594 CDS NP_947213.1 39934937 2691500 2097623..2098231 1 NC_005296.1 hypothetical protein 2098231 2691500 RPA1868 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947213.1 2097623 D 258594 CDS NP_947214.1 39934938 2691924 2098286..2099029 1 NC_005296.1 hypothetical protein 2099029 2691924 RPA1869 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947214.1 2098286 D 258594 CDS NP_947215.1 39934939 2691522 complement(2099324..2099839) 1 NC_005296.1 MarR family transcriptional regulator 2099839 2691522 RPA1870 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_947215.1 2099324 R 258594 CDS NP_947216.1 39934940 2691582 2099919..2101157 1 NC_005296.1 cytochrome P450 2101157 2691582 RPA1871 Rhodopseudomonas palustris CGA009 cytochrome P450 NP_947216.1 2099919 D 258594 CDS NP_947217.1 39934941 2691589 2101167..2101487 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; rhodocoxin 2101487 thcC 2691589 thcC Rhodopseudomonas palustris CGA009 rhodocoxin NP_947217.1 2101167 D 258594 CDS NP_947218.1 39934942 2691336 2101563..2102777 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter urea/short-chain binding protein 2102777 2691336 RPA1873 Rhodopseudomonas palustris CGA009 ABC transporter urea/short-chain binding protein NP_947218.1 2101563 D 258594 CDS NP_947219.1 39934943 2688745 complement(2102977..2103183) 1 NC_005296.1 hypothetical protein 2103183 2688745 RPA1874 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947219.1 2102977 R 258594 CDS NP_947220.1 39934944 2688835 complement(2103180..2104325) 1 NC_005296.1 hypothetical protein 2104325 2688835 RPA1875 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947220.1 2103180 R 258594 CDS NP_947221.1 39934945 2691399 complement(2104322..2106625) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TonB-dependent iron siderophore receptor 2106625 2691399 RPA1876 Rhodopseudomonas palustris CGA009 TonB-dependent iron siderophore receptor NP_947221.1 2104322 R 258594 CDS NP_947222.1 39934946 2691454 2107191..2108096 1 NC_005296.1 hypothetical protein 2108096 2691454 RPA1877 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947222.1 2107191 D 258594 CDS NP_947223.1 39934947 2691278 complement(2108394..2109569) 1 NC_005296.1 6-aminohexanoate-dimer hydrolase 2109569 2691278 RPA1878 Rhodopseudomonas palustris CGA009 6-aminohexanoate-dimer hydrolase NP_947223.1 2108394 R 258594 CDS NP_947224.1 39934948 2688804 complement(2109685..2110752) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; choloylglycine hydrolase 2110752 2688804 RPA1879 Rhodopseudomonas palustris CGA009 choloylglycine hydrolase NP_947224.1 2109685 R 258594 CDS NP_947225.1 39934949 2688822 2110908..2112551 1 NC_005296.1 MFS family transporter 2112551 2688822 RPA1880 Rhodopseudomonas palustris CGA009 MFS family transporter NP_947225.1 2110908 D 258594 CDS NP_947226.1 39934950 2689049 2112675..2114075 1 NC_005296.1 hypothetical protein 2114075 2689049 RPA1881 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947226.1 2112675 D 258594 CDS NP_947227.1 39934951 2691568 2114160..2114351 1 NC_005296.1 Flp/Fap pilin protein 2114351 2691568 RPA1882 Rhodopseudomonas palustris CGA009 Flp/Fap pilin protein NP_947227.1 2114160 D 258594 CDS NP_947228.1 39934952 2691509 2114647..2116200 1 NC_005296.1 hypothetical protein 2116200 2691509 RPA1883 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947228.1 2114647 D 258594 CDS NP_947229.1 39934953 2691284 2116794..2118473 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 2118473 2691284 RPA1884 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_947229.1 2116794 D 258594 CDS NP_947230.2 161610774 2691616 2118613..2119788 1 NC_005296.1 portal protein 2119788 2691616 RPA1885 Rhodopseudomonas palustris CGA009 portal protein NP_947230.2 2118613 D 258594 CDS NP_947231.1 39934955 2691630 2119814..2120014 1 NC_005296.1 hypothetical protein 2120014 2691630 RPA1886 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947231.1 2119814 D 258594 CDS NP_947232.1 39934956 2691357 2120319..2120996 1 NC_005296.1 phage protease 2120996 2691357 RPA1887 Rhodopseudomonas palustris CGA009 phage protease NP_947232.1 2120319 D 258594 CDS NP_947233.1 39934957 2691271 2121168..2122421 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; major capsid protein 2122421 2691271 RPA1888 Rhodopseudomonas palustris CGA009 major capsid protein NP_947233.1 2121168 D 258594 CDS NP_947234.1 39934958 2691545 2122753..2123124 1 NC_005296.1 hypothetical protein 2123124 2691545 RPA1889 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947234.1 2122753 D 258594 CDS NP_947235.1 39934959 2691534 complement(2123340..2126441) 1 NC_005296.1 hypothetical protein 2126441 2691534 RPA1890 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947235.1 2123340 R 258594 CDS NP_947236.1 39934960 2691455 2127296..2128252 1 NC_005296.1 hypothetical protein 2128252 2691455 RPA1891 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947236.1 2127296 D 258594 CDS NP_947237.1 39934961 2691457 2128329..2129489 1 NC_005296.1 terminase GTA 2129489 2691457 RPA1892 Rhodopseudomonas palustris CGA009 terminase GTA NP_947237.1 2128329 D 258594 CDS NP_947238.1 39934962 2691444 2129587..2129865 1 NC_005296.1 hypothetical protein 2129865 2691444 RPA1893 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947238.1 2129587 D 258594 CDS NP_947239.1 39934963 2691463 complement(2129885..2130196) 1 NC_005296.1 hypothetical protein 2130196 2691463 RPA1894 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947239.1 2129885 R 258594 CDS NP_947240.1 39934964 2691268 complement(2130278..2130982) 1 NC_005296.1 peptidase S1 and S6 chymotrypsin/Hap 2130982 2691268 RPA1895 Rhodopseudomonas palustris CGA009 peptidase S1 and S6 chymotrypsin/Hap NP_947240.1 2130278 R 258594 CDS NP_947241.1 39934965 2688834 2131110..2131670 1 NC_005296.1 hypothetical protein 2131670 GTA 2688834 GTA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947241.1 2131110 D 258594 CDS NP_947242.1 39934966 2691300 2131667..2131987 1 NC_005296.1 hypothetical protein 2131987 GTA 2691300 GTA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947242.1 2131667 D 258594 CDS NP_947243.1 39934967 2688924 2131984..2132394 1 NC_005296.1 hypothetical protein 2132394 GTA 2688924 GTA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947243.1 2131984 D 258594 CDS NP_947244.1 39934968 2688868 2132407..2132814 1 NC_005296.1 hypothetical protein 2132814 GTA 2688868 GTA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947244.1 2132407 D 258594 CDS NP_947245.2 45429962 2691384 join(2132824..2133138,2133135..2133326) 1 NC_005296.1 hypothetical protein 2133326 GTA 2691384 GTA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947245.2 2132824 D 258594 CDS NP_947247.1 39934971 2691609 2133338..2133931 1 NC_005296.1 hypothetical protein 2133931 GTA 2691609 GTA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947247.1 2133338 D 258594 CDS NP_947248.1 39934972 2691607 2134093..2134731 1 NC_005296.1 hypothetical protein 2134731 GTA 2691607 GTA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947248.1 2134093 D 258594 CDS NP_947249.1 39934973 2689157 2134844..2136670 1 NC_005296.1 hypothetical protein 2136670 2689157 RPA1904 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947249.1 2134844 D 258594 CDS NP_947250.1 39934974 2688955 2136963..2137874 1 NC_005296.1 hypothetical protein 2137874 GTA 2688955 GTA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947250.1 2136963 D 258594 CDS NP_947251.1 39934975 2691602 2137914..2138366 1 NC_005296.1 hypothetical protein 2138366 GTA 2691602 GTA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947251.1 2137914 D 258594 CDS NP_947252.1 39934976 2688992 2138431..2138856 1 NC_005296.1 hypothetical protein 2138856 2688992 RPA1907 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947252.1 2138431 D 258594 CDS NP_947253.1 39934977 2691352 complement(2138895..2139362) 1 NC_005296.1 hypothetical protein 2139362 2691352 RPA1908 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947253.1 2138895 R 258594 CDS NP_947254.1 39934978 2689122 2139516..2139989 1 NC_005296.1 MarR family transcriptional regulator 2139989 2689122 RPA1909 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_947254.1 2139516 D 258594 CDS NP_947255.1 39934979 2691599 2139991..2140443 1 NC_005296.1 hypothetical protein 2140443 2691599 RPA1910 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947255.1 2139991 D 258594 CDS NP_947256.1 39934980 2691627 2140469..2141014 1 NC_005296.1 nickel-dependent hydrogenase b-type cytochrome subunit 2141014 2691627 RPA1911 Rhodopseudomonas palustris CGA009 nickel-dependent hydrogenase b-type cytochrome subunit NP_947256.1 2140469 D 258594 CDS NP_947257.1 39934981 2688987 2141169..2145041 1 NC_005296.1 hypothetical protein 2145041 2688987 RPA1912 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947257.1 2141169 D 258594 CDS NP_947258.1 39934982 2688733 2145051..2146418 1 NC_005296.1 hypothetical protein 2146418 2688733 RPA1913 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947258.1 2145051 D 258594 CDS NP_947259.1 39934983 2688903 2146542..2147303 1 NC_005296.1 glycohydrolase 2147303 2688903 RPA1914 Rhodopseudomonas palustris CGA009 glycohydrolase NP_947259.1 2146542 D 258594 CDS NP_947260.1 39934984 2691293 2147990..2148664 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; two-component transcriptional regulator FeuP 2148664 feuP 2691293 feuP Rhodopseudomonas palustris CGA009 two-component transcriptional regulator FeuP NP_947260.1 2147990 D 258594 CDS NP_947261.1 39934985 2688882 2148680..2150071 1 NC_005296.1 periplasmic sensor signal transduction histidine kinase 2150071 feuQ 2688882 feuQ Rhodopseudomonas palustris CGA009 periplasmic sensor signal transduction histidine kinase NP_947261.1 2148680 D 258594 CDS NP_947262.1 39934986 2691337 2150168..2150632 1 NC_005296.1 LipA a lipoprotein 2150632 lipA1 2691337 lipA1 Rhodopseudomonas palustris CGA009 LipA a lipoprotein NP_947262.1 2150168 D 258594 CDS NP_947263.1 39934987 2691272 2150801..2152258 1 NC_005296.1 hypothetical protein 2152258 2691272 RPA1918 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947263.1 2150801 D 258594 CDS NP_947264.1 39934988 2688896 2152421..2153527 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome c-type biogenesis protein cycH 2153527 cycH 2688896 cycH Rhodopseudomonas palustris CGA009 cytochrome c-type biogenesis protein cycH NP_947264.1 2152421 D 258594 CDS NP_947265.1 39934989 2688890 2153641..2154144 1 NC_005296.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 2154144 cycJ 2688890 cycJ Rhodopseudomonas palustris CGA009 cytochrome c-type biogenesis protein CcmE NP_947265.1 2153641 D 258594 CDS NP_947266.1 39934990 2688800 2154141..2156123 1 NC_005296.1 cytochrome c-type biogenesis protein CcmF 2156123 cycK 2688800 cycK Rhodopseudomonas palustris CGA009 cytochrome c-type biogenesis protein CcmF NP_947266.1 2154141 D 258594 CDS NP_947267.1 39934991 2691601 2156125..2156634 1 NC_005296.1 cytochrome C biogenesis protein 2156634 cycL 2691601 cycL Rhodopseudomonas palustris CGA009 cytochrome C biogenesis protein NP_947267.1 2156125 D 258594 CDS NP_947268.1 39934992 2691329 complement(2156945..2157967) 1 NC_005296.1 formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate; formamidase 2157967 amiF 2691329 amiF Rhodopseudomonas palustris CGA009 formamidase NP_947268.1 2156945 R 258594 CDS NP_947269.1 39934993 2691320 complement(2158087..2158764) 1 NC_005296.1 cobalamin synthesis protein/P47K 2158764 2691320 RPA1924 Rhodopseudomonas palustris CGA009 cobalamin synthesis protein/P47K NP_947269.1 2158087 R 258594 CDS NP_947270.1 39934994 2691495 complement(2159007..2160473) 1 NC_005296.1 transmembrane protein 2160473 2691495 RPA1925 Rhodopseudomonas palustris CGA009 transmembrane protein NP_947270.1 2159007 R 258594 CDS NP_947271.1 39934995 2688949 2160548..2161399 1 NC_005296.1 XRE family transcriptional regulator 2161399 2688949 RPA1926 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_947271.1 2160548 D 258594 CDS NP_947272.1 39934996 2688901 complement(2161591..2162175) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2162175 2688901 RPA1927 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947272.1 2161591 R 258594 CDS NP_947273.1 39934997 2691324 complement(2162133..2163041) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ferredoxin 2163041 2691324 RPA1928 Rhodopseudomonas palustris CGA009 ferredoxin NP_947273.1 2162133 R 258594 CDS NP_947274.1 39934998 2688967 2163410..2164981 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; htrA-like serine protease 2164981 2688967 RPA1929 Rhodopseudomonas palustris CGA009 htrA-like serine protease NP_947274.1 2163410 D 258594 CDS NP_947275.1 39934999 2688838 2165214..2165939 1 NC_005296.1 two-component transcriptional regulator 2165939 2688838 RPA1930 Rhodopseudomonas palustris CGA009 two-component transcriptional regulator NP_947275.1 2165214 D 258594 CDS NP_947276.1 39935000 2688881 2166162..2167460 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 2167460 2688881 RPA1931 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_947276.1 2166162 D 258594 CDS NP_947277.1 39935001 2688805 2167673..2169121 1 NC_005296.1 periplasmic sensor signal transduction histidine kinase 2169121 2688805 RPA1932 Rhodopseudomonas palustris CGA009 periplasmic sensor signal transduction histidine kinase NP_947277.1 2167673 D 258594 CDS NP_947278.1 39935002 2688911 2169118..2172090 1 NC_005296.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 2172090 glnE 2688911 glnE Rhodopseudomonas palustris CGA009 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase NP_947278.1 2169118 D 258594 CDS NP_947279.1 39935003 2688986 complement(2172149..2172400) 1 NC_005296.1 hypothetical protein 2172400 2688986 RPA1934 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947279.1 2172149 R 258594 CDS NP_947280.1 39935004 2691413 complement(2172501..2173523) 1 NC_005296.1 AraC family transcriptional regulator 2173523 2691413 RPA1935 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_947280.1 2172501 R 258594 CDS NP_947281.1 39935005 2691327 2173925..2177401 1 NC_005296.1 serine protease/outer membrane autotransporter 2177401 2691327 RPA1936 Rhodopseudomonas palustris CGA009 serine protease/outer membrane autotransporter NP_947281.1 2173925 D 258594 CDS NP_947282.1 39935006 2689131 2177757..2178716 1 NC_005296.1 transposase 2178716 2689131 RPA1937 Rhodopseudomonas palustris CGA009 transposase NP_947282.1 2177757 D 258594 CDS NP_947283.1 39935007 2688908 complement(2178903..2181242) 1 NC_005296.1 sensor histidine kinase pleC 2181242 2688908 RPA1938 Rhodopseudomonas palustris CGA009 sensor histidine kinase pleC NP_947283.1 2178903 R 258594 CDS NP_947284.1 39935008 2691297 complement(2181428..2182810) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cation diffusion facilitator family transporter 2182810 2691297 RPA1939 Rhodopseudomonas palustris CGA009 cation diffusion facilitator family transporter NP_947284.1 2181428 R 258594 CDS NP_947285.1 39935009 2691469 complement(2182941..2183909) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; quinone oxidoreductase 2183909 2691469 RPA1940 Rhodopseudomonas palustris CGA009 quinone oxidoreductase NP_947285.1 2182941 R 258594 CDS NP_947286.1 39935010 2691549 complement(2183952..2184950) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-nitropropane dioxygenase 2184950 2691549 RPA1941 Rhodopseudomonas palustris CGA009 2-nitropropane dioxygenase NP_947286.1 2183952 R 258594 CDS NP_947287.1 39935011 2691477 complement(2185188..2185973) 1 NC_005296.1 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 2185973 2691477 RPA1942 Rhodopseudomonas palustris CGA009 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase NP_947287.1 2185188 R 258594 CDS NP_947288.1 39935012 2691453 complement(2186129..2187121) 1 NC_005296.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 2187121 panE 2691453 panE Rhodopseudomonas palustris CGA009 2-dehydropantoate 2-reductase NP_947288.1 2186129 R 258594 CDS NP_947289.1 39935013 2691535 complement(2187210..2188550) 1 NC_005296.1 oxalate/formate antiporter 2188550 oxlT 2691535 oxlT Rhodopseudomonas palustris CGA009 oxalate/formate antiporter NP_947289.1 2187210 R 258594 CDS NP_947290.1 39935014 2688995 complement(2188671..2189996) 1 NC_005296.1 catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; formyl-coenzyme A transferase 2189996 2688995 RPA1945 Rhodopseudomonas palustris CGA009 formyl-coenzyme A transferase NP_947290.1 2188671 R 258594 CDS NP_947291.1 39935015 2689121 complement(2190065..2191039) 1 NC_005296.1 GntR family transcriptional regulator 2191039 2689121 RPA1946 Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_947291.1 2190065 R 258594 CDS NP_947292.1 39935016 2691631 2191349..2192275 1 NC_005296.1 possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 2192275 pqqB 2691631 pqqB Rhodopseudomonas palustris CGA009 pyrroloquinoline quinone biosynthesis protein PqqB NP_947292.1 2191349 D 258594 CDS NP_947293.1 39935017 2688798 2192272..2193036 1 NC_005296.1 Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 2193036 pqqC 2688798 pqqC Rhodopseudomonas palustris CGA009 pyrroloquinoline quinone biosynthesis protein PqqC NP_947293.1 2192272 D 258594 CDS NP_947294.1 39935018 2691638 2193041..2193349 1 NC_005296.1 coenzyme PQQ synthesis D 2193349 pqqD 2691638 pqqD Rhodopseudomonas palustris CGA009 coenzyme PQQ synthesis D NP_947294.1 2193041 D 258594 CDS NP_947295.1 39935019 2691285 2193391..2194524 1 NC_005296.1 pyrroloquinoline quinone biosynthesis protein PqqE 2194524 pqqE 2691285 pqqE Rhodopseudomonas palustris CGA009 pyrroloquinoline quinone biosynthesis protein PqqE NP_947295.1 2193391 D 258594 CDS NP_947296.1 39935020 2691501 complement(2194774..2195664) 1 NC_005296.1 FusE-MFP/HlyD family membrane protein 2195664 2691501 RPA1951 Rhodopseudomonas palustris CGA009 FusE-MFP/HlyD family membrane protein NP_947296.1 2194774 R 258594 CDS NP_947297.1 39935021 2691405 complement(2195661..2195870) 1 NC_005296.1 hypothetical protein 2195870 2691405 RPA1952 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947297.1 2195661 R 258594 CDS NP_947298.1 39935022 2691517 complement(2195870..2197882) 1 NC_005296.1 FusB/FusC fusaric acid resistance pump 2197882 2691517 RPA1953 Rhodopseudomonas palustris CGA009 FusB/FusC fusaric acid resistance pump NP_947298.1 2195870 R 258594 CDS NP_947299.1 39935023 2691514 2198048..2198734 1 NC_005296.1 TetR family transcriptional regulator 2198734 2691514 RPA1954 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_947299.1 2198048 D 258594 CDS NP_947300.1 39935024 2691289 complement(2198871..2199980) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutathione dependent formaldehyde dehydrogenase 2199980 2691289 RPA1955 Rhodopseudomonas palustris CGA009 glutathione dependent formaldehyde dehydrogenase NP_947300.1 2198871 R 258594 CDS NP_947301.1 39935025 2691424 complement(2200078..2201601) 1 NC_005296.1 ATPase 2201601 2691424 RPA1956 Rhodopseudomonas palustris CGA009 ATPase NP_947301.1 2200078 R 258594 CDS NP_947302.1 39935026 2691433 complement(2201728..2202744) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alkanal monooxygenase 2202744 2691433 RPA1957 Rhodopseudomonas palustris CGA009 alkanal monooxygenase NP_947302.1 2201728 R 258594 CDS NP_947303.1 39935027 2691539 complement(2202856..2203479) 1 NC_005296.1 TetR family transcriptional regulator 2203479 2691539 RPA1958 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_947303.1 2202856 R 258594 CDS NP_947304.1 39935028 2691274 2203559..2204647 1 NC_005296.1 RND efflux membrane protein 2204647 2691274 RPA1959 Rhodopseudomonas palustris CGA009 RND efflux membrane protein NP_947304.1 2203559 D 258594 CDS NP_947305.1 39935029 2688754 2204644..2205717 1 NC_005296.1 RND efflux membrane protein 2205717 2688754 RPA1960 Rhodopseudomonas palustris CGA009 RND efflux membrane protein NP_947305.1 2204644 D 258594 CDS NP_947306.1 39935030 2688944 2205714..2208764 1 NC_005296.1 RND efflux transporter 2208764 2688944 RPA1961 Rhodopseudomonas palustris CGA009 RND efflux transporter NP_947306.1 2205714 D 258594 CDS NP_947307.1 39935031 2688821 2208766..2209047 1 NC_005296.1 hypothetical protein 2209047 2688821 RPA1962 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947307.1 2208766 D 258594 CDS NP_947308.1 39935032 2691492 2209076..2210269 1 NC_005296.1 patatin-like phospholipase domain-containing protein 2210269 2691492 RPA1963 Rhodopseudomonas palustris CGA009 patatin-like phospholipase domain-containing protein NP_947308.1 2209076 D 258594 CDS NP_947309.1 39935033 2691577 2210328..2210885 1 NC_005296.1 hypothetical protein 2210885 2691577 RPA1964 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947309.1 2210328 D 258594 CDS NP_947310.1 39935034 2689017 complement(2210911..2212899) 1 NC_005296.1 adenylate/guanylate cyclase 2212899 2689017 RPA1965 Rhodopseudomonas palustris CGA009 adenylate/guanylate cyclase NP_947310.1 2210911 R 258594 CDS NP_947311.1 39935035 2691915 complement(2213166..2213798) 1 NC_005296.1 TetR family transcriptional regulator 2213798 2691915 RPA1966 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_947311.1 2213166 R 258594 CDS NP_947312.1 39935036 2688840 2213962..2215077 1 NC_005296.1 component of multidrug efflux system 2215077 2688840 RPA1967 Rhodopseudomonas palustris CGA009 component of multidrug efflux system NP_947312.1 2213962 D 258594 CDS NP_947313.1 39935037 2688985 2215077..2218232 1 NC_005296.1 RND efflux transporter 2218232 2688985 RPA1968 Rhodopseudomonas palustris CGA009 RND efflux transporter NP_947313.1 2215077 D 258594 CDS NP_947314.1 39935038 2691585 2218343..2219338 1 NC_005296.1 tRNA-dihydrouridine synthase A 2219338 yjbN 2691585 yjbN Rhodopseudomonas palustris CGA009 tRNA-dihydrouridine synthase A NP_947314.1 2218343 D 258594 CDS NP_947315.1 39935039 2691435 complement(2219352..2219888) 1 NC_005296.1 hypothetical protein 2219888 2691435 RPA1970 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947315.1 2219352 R 258594 CDS NP_947316.1 39935040 2690228 complement(2219911..2220183) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2220183 2690228 RPA1971 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947316.1 2219911 R 258594 CDS NP_947317.1 39935041 2691995 complement(2220180..2221778) 1 NC_005296.1 sensor signal transduction histidine kinase 2221778 2691995 RPA1972 Rhodopseudomonas palustris CGA009 sensor signal transduction histidine kinase NP_947317.1 2220180 R 258594 CDS NP_947318.1 39935042 2690385 complement(2221944..2222813) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-hydroxyisobutyrate dehydrogenase 2222813 2690385 RPA1973 Rhodopseudomonas palustris CGA009 3-hydroxyisobutyrate dehydrogenase NP_947318.1 2221944 R 258594 CDS NP_947319.1 39935043 2690413 2223122..2224234 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ATP/GTP-binding-like protein 2224234 2690413 RPA1974 Rhodopseudomonas palustris CGA009 ATP/GTP-binding-like protein NP_947319.1 2223122 D 258594 CDS NP_947320.1 39935044 2690438 2224485..2225576 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; twin-arginine translocation pathway signal 2225576 2690438 RPA1975 Rhodopseudomonas palustris CGA009 twin-arginine translocation pathway signal NP_947320.1 2224485 D 258594 CDS NP_947321.1 39935045 2690456 complement(2225766..2227607) 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctM 2227607 2690456 RPA1976 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctM NP_947321.1 2225766 R 258594 CDS NP_947322.1 39935046 2691866 complement(2227645..2228241) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TRAP dicarboxylate family transporter subunit DctQ 2228241 2691866 RPA1977 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctQ NP_947322.1 2227645 R 258594 CDS NP_947323.1 39935047 2690480 complement(2228415..2229449) 1 NC_005296.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2229449 moaA 2690480 moaA Rhodopseudomonas palustris CGA009 molybdenum cofactor biosynthesis protein A NP_947323.1 2228415 R 258594 CDS NP_947324.1 39935048 2690483 complement(2229556..2230005) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2230005 2690483 RPA1979 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947324.1 2229556 R 258594 CDS NP_947325.1 39935049 2690498 complement(2230169..2230846) 1 NC_005296.1 catalyzes the formation of glycolate and phosphate from 2-phosphoglycolate; phosphoglycolate phosphatase 2230846 cbbZ 2690498 cbbZ Rhodopseudomonas palustris CGA009 phosphoglycolate phosphatase NP_947325.1 2230169 R 258594 CDS NP_947326.1 39935050 2690294 2230997..2231695 1 NC_005296.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 2231695 cbbI 2690294 cbbI Rhodopseudomonas palustris CGA009 ribose-5-phosphate isomerase A NP_947326.1 2230997 D 258594 CDS NP_947327.1 39935051 2692028 2231692..2232231 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2232231 2692028 RPA1982 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947327.1 2231692 D 258594 CDS NP_947328.1 39935052 2692061 2232249..2233634 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutathione reductase 2233634 gor 2692061 gor Rhodopseudomonas palustris CGA009 glutathione reductase NP_947328.1 2232249 D 258594 CDS NP_947329.1 39935053 2690026 2233823..2235211 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phospho-2-dehydro-3-deoxyheptonate aldolase 2235211 aroG2 2690026 aroG2 Rhodopseudomonas palustris CGA009 phospho-2-dehydro-3-deoxyheptonate aldolase NP_947329.1 2233823 D 258594 CDS NP_947330.1 39935054 2690536 2235342..2235695 1 NC_005296.1 diacylglycerol kinase 2235695 2690536 RPA1985 Rhodopseudomonas palustris CGA009 diacylglycerol kinase NP_947330.1 2235342 D 258594 CDS NP_947331.1 39935055 2690132 2235739..2237493 1 NC_005296.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2237493 nadE 2690132 nadE Rhodopseudomonas palustris CGA009 NAD synthetase NP_947331.1 2235739 D 258594 CDS NP_947332.1 39935056 2692101 complement(2237747..2238076) 1 NC_005296.1 hypothetical protein 2238076 2692101 RPA1987 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947332.1 2237747 R 258594 CDS NP_947333.1 39935057 2692124 complement(2238302..2239309) 1 NC_005296.1 AraC family transcriptional regulator 2239309 2692124 RPA1988 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_947333.1 2238302 R 258594 CDS NP_947334.1 39935058 2692127 2239874..2240200 1 NC_005296.1 hypothetical protein 2240200 2692127 RPA1989 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947334.1 2239874 D 258594 CDS NP_947335.1 39935059 2690587 2240367..2242157 1 NC_005296.1 sulfatase 2242157 2690587 RPA1990 Rhodopseudomonas palustris CGA009 sulfatase NP_947335.1 2240367 D 258594 CDS NP_947336.1 39935060 2690606 2242169..2243230 1 NC_005296.1 hypothetical protein 2243230 2690606 RPA1991 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947336.1 2242169 D 258594 CDS NP_947337.1 39935061 2689890 complement(2243485..2243895) 1 NC_005296.1 NtrR protein 2243895 2689890 RPA1992 Rhodopseudomonas palustris CGA009 NtrR protein NP_947337.1 2243485 R 258594 CDS NP_947338.1 39935062 2692148 complement(2243892..2244155) 1 NC_005296.1 virulence-associated protein 2244155 2692148 RPA1993 Rhodopseudomonas palustris CGA009 virulence-associated protein NP_947338.1 2243892 R 258594 CDS NP_947339.1 39935063 2690628 2244336..2244761 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2244761 2690628 RPA1994 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947339.1 2244336 D 258594 CDS NP_947340.1 39935064 2690653 complement(2244858..2246027) 1 NC_005296.1 hypothetical protein 2246027 2690653 RPA1995 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947340.1 2244858 R 258594 CDS NP_947341.1 39935065 2690028 complement(2246213..2246521) 1 NC_005296.1 hypothetical protein 2246521 2690028 RPA1996 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947341.1 2246213 R 258594 CDS NP_947342.1 39935066 2692191 2246922..2248313 1 NC_005296.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2248313 cysS 2692191 cysS Rhodopseudomonas palustris CGA009 cysteinyl-tRNA synthetase NP_947342.1 2246922 D 258594 CDS NP_947343.1 39935067 2692202 2248843..2248974 1 NC_005296.1 hypothetical protein 2248974 2692202 RPA1998 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947343.1 2248843 D 258594 CDS NP_947344.1 39935068 2690683 2248971..2249474 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; N-acetyltransferase GCN5 2249474 2690683 RPA1999 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_947344.1 2248971 D 258594 CDS NP_947345.1 39935069 2692250 2249471..2251069 1 NC_005296.1 catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA; alpha-isopropylmalate/homocitrate synthase family transferase 2251069 leuA 2692250 leuA Rhodopseudomonas palustris CGA009 alpha-isopropylmalate/homocitrate synthase family transferase NP_947345.1 2249471 D 258594 CDS NP_947346.1 39935070 2690718 2251263..2252807 1 NC_005296.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 2252807 2690718 RPA2001 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947346.1 2251263 D 258594 CDS NP_947347.1 39935071 2691813 2252819..2254228 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FAD linked oxidase 2254228 2691813 RPA2002 Rhodopseudomonas palustris CGA009 FAD linked oxidase NP_947347.1 2252819 D 258594 CDS NP_947348.1 39935072 2692278 complement(2254253..2256322) 1 NC_005296.1 cytochrome c 2256322 2692278 RPA2003 Rhodopseudomonas palustris CGA009 cytochrome c NP_947348.1 2254253 R 258594 CDS NP_947349.1 39935073 2690204 complement(2256505..2257140) 1 NC_005296.1 hypothetical protein 2257140 2690204 RPA2004 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947349.1 2256505 R 258594 CDS NP_947350.1 39935074 2690013 2257299..2259254 1 NC_005296.1 multidrug ABC transporter 2259254 2690013 RPA2005 Rhodopseudomonas palustris CGA009 multidrug ABC transporter NP_947350.1 2257299 D 258594 CDS NP_947351.2 161610773 2692337 2259303..2260001 1 NC_005296.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 2260001 psd 2692337 psd Rhodopseudomonas palustris CGA009 phosphatidylserine decarboxylase NP_947351.2 2259303 D 258594 CDS NP_947352.1 39935076 2690729 2260031..2260945 1 NC_005296.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 2260945 pssA 2690729 pssA Rhodopseudomonas palustris CGA009 CDP-diacylglycerol--serine O-phosphatidyltransferase NP_947352.1 2260031 D 258594 CDS NP_947353.1 39935077 2692362 2261081..2261800 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2261800 2692362 RPA2008 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947353.1 2261081 D 258594 CDS NP_947354.1 39935078 2692379 2262032..2262805 1 NC_005296.1 MotA/TolQ/ExbB proton channel 2262805 2692379 RPA2009 Rhodopseudomonas palustris CGA009 MotA/TolQ/ExbB proton channel NP_947354.1 2262032 D 258594 CDS NP_947355.1 39935079 2692405 2262836..2263660 1 NC_005296.1 chemotaxis protein motB1 2263660 motB1 2692405 motB1 Rhodopseudomonas palustris CGA009 chemotaxis protein motB1 NP_947355.1 2262836 D 258594 CDS NP_947356.1 39935080 2690749 2263810..2265765 1 NC_005296.1 potassium uptake protein Kup 2265765 2690749 RPA2011 Rhodopseudomonas palustris CGA009 potassium uptake protein Kup NP_947356.1 2263810 D 258594 CDS NP_947357.1 39935081 2692432 2265975..2266301 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; rhodanese-like protein 2266301 2692432 RPA2012 Rhodopseudomonas palustris CGA009 rhodanese-like protein NP_947357.1 2265975 D 258594 CDS NP_947358.1 39935082 2690760 2266324..2267481 1 NC_005296.1 hypothetical protein 2267481 2690760 RPA2013 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947358.1 2266324 D 258594 CDS NP_947359.1 39935083 2692441 2267489..2268604 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; family 1 extracellular solute-binding protein 2268604 2692441 RPA2014 Rhodopseudomonas palustris CGA009 family 1 extracellular solute-binding protein NP_947359.1 2267489 D 258594 CDS NP_947360.1 39935084 2690789 2268717..2269856 1 NC_005296.1 hypothetical protein 2269856 2690789 RPA2015 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947360.1 2268717 D 258594 CDS NP_947361.1 39935085 2692473 complement(2269872..2271830) 1 NC_005296.1 methyltransferase-like protein 2271830 2692473 RPA2016 Rhodopseudomonas palustris CGA009 methyltransferase-like protein NP_947361.1 2269872 R 258594 CDS NP_947362.1 39935086 2692481 complement(2272117..2273049) 1 NC_005296.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2273049 2692481 RPA2017 Rhodopseudomonas palustris CGA009 lipid A biosynthesis lauroyl acyltransferase NP_947362.1 2272117 R 258594 CDS NP_947363.1 39935087 2692482 complement(2273049..2274071) 1 NC_005296.1 alcohol dehydrogenase 2274071 2692482 RPA2018 Rhodopseudomonas palustris CGA009 alcohol dehydrogenase NP_947363.1 2273049 R 258594 CDS NP_947364.1 39935088 2690840 complement(2274168..2275448) 1 NC_005296.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 2275448 2690840 RPA2019 Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP synthase NP_947364.1 2274168 R 258594 CDS NP_947365.1 39935089 2690848 complement(2275459..2276667) 1 NC_005296.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 2276667 2690848 RPA2020 Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP synthase NP_947365.1 2275459 R 258594 CDS NP_947366.1 39935090 2690110 complement(2276660..2277130) 1 NC_005296.1 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 2277130 2690110 RPA2021 Rhodopseudomonas palustris CGA009 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ NP_947366.1 2276660 R 258594 CDS NP_947367.1 39935091 2689370 complement(2277156..2277437) 1 NC_005296.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 2277437 2689370 RPA2022 Rhodopseudomonas palustris CGA009 acyl carrier protein NP_947367.1 2277156 R 258594 CDS NP_947368.1 39935092 2690122 complement(2277604..2277957) 1 NC_005296.1 hypothetical protein 2277957 2690122 RPA2023 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947368.1 2277604 R 258594 CDS NP_947369.1 39935093 2690895 2278154..2278777 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2278777 2690895 RPA2024 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947369.1 2278154 D 258594 CDS NP_947370.1 39935094 2692502 complement(2278805..2279266) 1 NC_005296.1 Mg2+ transporter 2279266 2692502 RPA2025 Rhodopseudomonas palustris CGA009 Mg2+ transporter NP_947370.1 2278805 R 258594 CDS NP_947371.1 39935095 2690908 2279693..2282260 1 NC_005296.1 ferric siderophore receptor 2282260 2690908 RPA2026 Rhodopseudomonas palustris CGA009 ferric siderophore receptor NP_947371.1 2279693 D 258594 CDS NP_947372.1 39935096 2692525 complement(2282020..2283771) 1 NC_005296.1 hypothetical protein 2283771 2692525 RPA2027 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947372.1 2282020 R 258594 CDS NP_947373.1 39935097 2690912 2284104..2284685 1 NC_005296.1 hypothetical protein 2284685 2690912 RPA2028 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947373.1 2284104 D 258594 CDS NP_947374.1 39935098 2692557 complement(2284710..2285441) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphoserine phosphatase 2285441 serB 2692557 serB Rhodopseudomonas palustris CGA009 phosphoserine phosphatase NP_947374.1 2284710 R 258594 CDS NP_947375.1 39935099 2690931 2285587..2286552 1 NC_005296.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2286552 miaA 2690931 miaA Rhodopseudomonas palustris CGA009 tRNA delta(2)-isopentenylpyrophosphate transferase NP_947375.1 2285587 D 258594 CDS NP_947376.1 39935100 2692596 2286918..2288696 1 NC_005296.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit 2288696 ilvI 2692596 ilvI Rhodopseudomonas palustris CGA009 acetolactate synthase 3 catalytic subunit NP_947376.1 2286918 D 258594 CDS NP_947377.1 39935101 2690948 2288912..2289454 1 NC_005296.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2289454 ilvH 2690948 ilvH Rhodopseudomonas palustris CGA009 acetolactate synthase 3 regulatory subunit NP_947377.1 2288912 D 258594 CDS NP_947378.1 39935102 2690075 complement(2289458..2289856) 1 NC_005296.1 AtsE 2289856 2690075 RPA2033 Rhodopseudomonas palustris CGA009 AtsE NP_947378.1 2289458 R 258594 CDS NP_947379.1 39935103 2690950 2290068..2290943 1 NC_005296.1 DMT family permease 2290943 2690950 RPA2034 Rhodopseudomonas palustris CGA009 DMT family permease NP_947379.1 2290068 D 258594 CDS NP_947380.1 39935104 2692618 2291138..2292157 1 NC_005296.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2292157 ilvC 2692618 ilvC Rhodopseudomonas palustris CGA009 ketol-acid reductoisomerase NP_947380.1 2291138 D 258594 CDS NP_947381.1 39935105 2690979 2292447..2293175 1 NC_005296.1 GntR family transcriptional regulator 2293175 2690979 RPA2036 Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_947381.1 2292447 D 258594 CDS NP_947382.1 39935106 2692644 2293274..2294506 1 NC_005296.1 periplasmic binding protein 2294506 2692644 RPA2037 Rhodopseudomonas palustris CGA009 periplasmic binding protein NP_947382.1 2293274 D 258594 CDS NP_947383.1 39935107 2692662 2294633..2295487 1 NC_005296.1 short-chain dehydrogenase/reductase SDR 2295487 2692662 RPA2038 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_947383.1 2294633 D 258594 CDS NP_947384.1 39935108 2692669 complement(2295590..2297137) 1 NC_005296.1 glycine betaine ABC transporter substrate-binding protein 2297137 2692669 RPA2039 Rhodopseudomonas palustris CGA009 glycine betaine ABC transporter substrate-binding protein NP_947384.1 2295590 R 258594 CDS NP_947385.1 39935109 2689919 complement(2297134..2297742) 1 NC_005296.1 choline ABC transporter ATP-binding subunit 2297742 2689919 RPA2040 Rhodopseudomonas palustris CGA009 choline ABC transporter ATP-binding subunit NP_947385.1 2297134 R 258594 CDS NP_947386.1 39935110 2690220 2297977..2298837 1 NC_005296.1 ABC-transport protein ATP-binding protein 2298837 2690220 RPA2041 Rhodopseudomonas palustris CGA009 ABC-transport protein ATP-binding protein NP_947386.1 2297977 D 258594 CDS NP_947387.1 39935111 2692680 2299064..2299858 1 NC_005296.1 ABC transporter permease 2299858 2692680 RPA2042 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947387.1 2299064 D 258594 CDS NP_947388.1 39935112 2692710 2299917..2300939 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter periplasmic substrate-binding protein 2300939 2692710 RPA2043 Rhodopseudomonas palustris CGA009 ABC transporter periplasmic substrate-binding protein NP_947388.1 2299917 D 258594 CDS NP_947389.1 39935113 2692724 2300947..2301663 1 NC_005296.1 hypothetical protein 2301663 2692724 RPA2044 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947389.1 2300947 D 258594 CDS NP_947390.1 39935114 2689033 complement(2301725..2302735) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; biotin synthase 2302735 bioB 2689033 bioB Rhodopseudomonas palustris CGA009 biotin synthase NP_947390.1 2301725 R 258594 CDS NP_947391.1 39935115 2689030 2303251..2304825 1 NC_005296.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2304825 leuI 2689030 leuI Rhodopseudomonas palustris CGA009 2-isopropylmalate synthase NP_947391.1 2303251 D 258594 CDS NP_947392.1 39935116 2692752 2305049..2306053 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TRAP dicarboxylate family transporter subunit DctP 2306053 dctP1 2692752 dctP1 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctP NP_947392.1 2305049 D 258594 CDS NP_947393.1 39935117 2692791 2306192..2306776 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctQ 2306776 dctQ1 2692791 dctQ1 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctQ NP_947393.1 2306192 D 258594 CDS NP_947394.1 39935118 2691116 2306773..2308098 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctM 2308098 dctM1 2691116 dctM1 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctM NP_947394.1 2306773 D 258594 CDS NP_947395.1 39935119 2692826 2308231..2308830 1 NC_005296.1 hypothetical protein 2308830 2692826 RPA2050 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947395.1 2308231 D 258594 CDS NP_947396.1 39935120 2691155 2309647..2312004 1 NC_005296.1 ornithine decarboxylase 2312004 2691155 RPA2051 Rhodopseudomonas palustris CGA009 ornithine decarboxylase NP_947396.1 2309647 D 258594 CDS NP_947397.1 39935121 2692876 2311958..2312569 1 NC_005296.1 phophinothricin N-acetyltransferase 2312569 2692876 RPA2052 Rhodopseudomonas palustris CGA009 phophinothricin N-acetyltransferase NP_947397.1 2311958 D 258594 CDS NP_947398.1 39935122 2692892 2312691..2313050 1 NC_005296.1 hypothetical protein 2313050 2692892 RPA2053 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947398.1 2312691 D 258594 CDS NP_947399.1 39935123 2691164 2313105..2314376 1 NC_005296.1 outer membrane protein CzcC 2314376 2691164 RPA2054 Rhodopseudomonas palustris CGA009 outer membrane protein CzcC NP_947399.1 2313105 D 258594 CDS NP_947400.1 39935124 2692923 2314373..2315368 1 NC_005296.1 RND divalent metal cation efflux membrane fusion protein CzcB 2315368 2692923 RPA2055 Rhodopseudomonas palustris CGA009 RND divalent metal cation efflux membrane fusion protein CzcB NP_947400.1 2314373 D 258594 CDS NP_947401.1 39935125 2691178 2315398..2318613 1 NC_005296.1 RND divalent metal cation efflux transporter CzcA 2318613 czcA2 2691178 czcA2 Rhodopseudomonas palustris CGA009 RND divalent metal cation efflux transporter CzcA NP_947401.1 2315398 D 258594 CDS NP_947402.1 39935126 2691203 2318610..2318978 1 NC_005296.1 hypothetical protein 2318978 2691203 RPA2057 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947402.1 2318610 D 258594 CDS NP_947403.1 39935127 2690047 complement(2319039..2319308) 1 NC_005296.1 hypothetical protein 2319308 2690047 RPA2058 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947403.1 2319039 R 258594 CDS NP_947404.1 39935128 2690357 complement(2319382..2320281) 1 NC_005296.1 hypothetical protein 2320281 2690357 RPA2059 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947404.1 2319382 R 258594 CDS NP_947405.1 39935129 2692990 2320449..2322716 1 NC_005296.1 regulatory protein NosR 2322716 nosR 2692990 nosR Rhodopseudomonas palustris CGA009 regulatory protein NosR NP_947405.1 2320449 D 258594 CDS NP_947406.1 39935130 2693032 2322735..2324672 1 NC_005296.1 reduces nitrous oxide to nitrogen; nitrous-oxide reductase 2324672 nosZ 2693032 nosZ Rhodopseudomonas palustris CGA009 nitrous-oxide reductase NP_947406.1 2322735 D 258594 CDS NP_947407.1 39935131 2693058 2324675..2326039 1 NC_005296.1 periplasmic ABC transport copper binding protein 2326039 nosD 2693058 nosD Rhodopseudomonas palustris CGA009 periplasmic ABC transport copper binding protein NP_947407.1 2324675 D 258594 CDS NP_947408.1 39935132 2693080 2326036..2326941 1 NC_005296.1 NosF protein 2326941 nosF 2693080 nosF Rhodopseudomonas palustris CGA009 NosF protein NP_947408.1 2326036 D 258594 CDS NP_947409.1 39935133 2693084 2326938..2327765 1 NC_005296.1 copper ABC transporter permease 2327765 nosY 2693084 nosY Rhodopseudomonas palustris CGA009 copper ABC transporter permease NP_947409.1 2326938 D 258594 CDS NP_947410.1 39935134 2689780 2327762..2328313 1 NC_005296.1 hypothetical protein 2328313 nosL 2689780 nosL Rhodopseudomonas palustris CGA009 hypothetical protein NP_947410.1 2327762 D 258594 CDS NP_947411.1 39935135 2690350 2328326..2329324 1 NC_005296.1 nosX 2329324 nosX 2690350 nosX Rhodopseudomonas palustris CGA009 nosX NP_947411.1 2328326 D 258594 CDS NP_947412.1 39935136 2691241 2329360..2329830 1 NC_005296.1 hypothetical protein 2329830 2691241 RPA2067 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947412.1 2329360 D 258594 CDS NP_947413.1 39935137 2691680 2329917..2330204 1 NC_005296.1 hypothetical protein 2330204 2691680 RPA2068 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947413.1 2329917 D 258594 CDS NP_947414.1 39935138 2691706 2330201..2331484 1 NC_005296.1 hypothetical protein 2331484 2691706 RPA2069 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947414.1 2330201 D 258594 CDS NP_947415.1 39935139 2690337 2331496..2332005 1 NC_005296.1 hypothetical protein 2332005 2690337 RPA2070 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947415.1 2331496 D 258594 CDS NP_947416.1 39935140 2689389 complement(2332157..2332408) 1 NC_005296.1 hypothetical protein 2332408 2689389 RPA2071 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947416.1 2332157 R 258594 CDS NP_947417.1 39935141 2691752 complement(2332505..2332651) 1 NC_005296.1 3-oxoacyl-ACP reductase 2332651 2691752 RPA2072 Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP reductase NP_947417.1 2332505 R 258594 CDS NP_947418.1 39935142 2691755 complement(2332713..2333363) 1 NC_005296.1 oxidoreductase 2333363 2691755 RPA2073 Rhodopseudomonas palustris CGA009 oxidoreductase NP_947418.1 2332713 R 258594 CDS NP_947419.1 39935143 2691784 complement(2333431..2333799) 1 NC_005296.1 chemotaxis protein CheY 2333799 2691784 RPA2074 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_947419.1 2333431 R 258594 CDS NP_947420.1 39935144 2691799 complement(2333796..2335697) 1 NC_005296.1 signal transduction histidine kinase 2335697 2691799 RPA2075 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_947420.1 2333796 R 258594 CDS NP_947421.1 39935145 2689566 complement(2336125..2336811) 1 NC_005296.1 signal transduction histidine kinase 2336811 2689566 RPA2076 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_947421.1 2336125 R 258594 CDS NP_947422.1 39935146 2691800 complement(2336808..2337734) 1 NC_005296.1 Crp/Fnr family transcriptional regulator 2337734 2691800 RPA2077 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_947422.1 2336808 R 258594 CDS NP_947423.1 39935147 2691805 2337879..2338001 1 NC_005296.1 hypothetical protein 2338001 2691805 RPA2078 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947423.1 2337879 D 258594 CDS NP_947424.1 39935148 2691828 2338189..2338308 1 NC_005296.1 hypothetical protein 2338308 2691828 RPA2079 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947424.1 2338189 D 258594 CDS NP_947425.1 39935149 2689753 complement(2338535..2339704) 1 NC_005296.1 zinc-containing dehydrogenase 2339704 2689753 RPA2080 Rhodopseudomonas palustris CGA009 zinc-containing dehydrogenase NP_947425.1 2338535 R 258594 CDS NP_947426.1 39935150 2689758 2340151..2341086 1 NC_005296.1 Fe ABC transporter 2341086 2689758 RPA2081 Rhodopseudomonas palustris CGA009 Fe ABC transporter NP_947426.1 2340151 D 258594 CDS NP_947427.1 39935151 2689993 complement(2341120..2341869) 1 NC_005296.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 2341869 cobA 2689993 cobA Rhodopseudomonas palustris CGA009 uroporphyrin-III C-methyltransferase NP_947427.1 2341120 R 258594 CDS NP_947428.1 39935152 2689998 complement(2341869..2343230) 1 NC_005296.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 2343230 cobB 2689998 cobB Rhodopseudomonas palustris CGA009 cobyrinic acid a,c-diamide synthase NP_947428.1 2341869 R 258594 CDS NP_947429.1 39935153 2691844 complement(2343217..2343996) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; precorrin-4 C(11)-methyltransferase 2343996 cobM 2691844 cobM Rhodopseudomonas palustris CGA009 precorrin-4 C(11)-methyltransferase NP_947429.1 2343217 R 258594 CDS NP_947430.1 39935154 2693493 complement(2343993..2344385) 1 NC_005296.1 cobalamin biosynthesis protein CbiG 2344385 CbiG 2693493 CbiG Rhodopseudomonas palustris CGA009 cobalamin biosynthesis protein CbiG NP_947430.1 2343993 R 258594 CDS NP_947431.1 39935155 2693296 complement(2344382..2345605) 1 NC_005296.1 precorrin-6y C5,15-methyltransferase subunit CbiE 2345605 cobL 2693296 cobL Rhodopseudomonas palustris CGA009 precorrin-6y C5,15-methyltransferase subunit CbiE NP_947431.1 2344382 R 258594 CDS NP_947432.1 39935156 2693251 2345604..2346386 1 NC_005296.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 2346386 cobK 2693251 cobK Rhodopseudomonas palustris CGA009 cobalt-precorrin-6x reductase NP_947432.1 2345604 D 258594 CDS NP_947433.1 39935157 2693210 complement(2346353..2347114) 1 NC_005296.1 precorrin-3B C(17)-methyltransferase 2347114 cobJ 2693210 cobJ Rhodopseudomonas palustris CGA009 precorrin-3B C(17)-methyltransferase NP_947433.1 2346353 R 258594 CDS NP_947434.1 39935158 2693181 complement(2347111..2347839) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; precorrin-2 C(20)-methyltransferase 2347839 cobI 2693181 cobI Rhodopseudomonas palustris CGA009 precorrin-2 C(20)-methyltransferase NP_947434.1 2347111 R 258594 CDS NP_947435.1 39935159 2693151 complement(2347836..2348465) 1 NC_005296.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 2348465 cobH 2693151 cobH Rhodopseudomonas palustris CGA009 precorrin-8X methylmutase NP_947435.1 2347836 R 258594 CDS NP_947436.1 39935160 2693159 complement(2348462..2349025) 1 NC_005296.1 hypothetical protein 2349025 2693159 RPA2091 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947436.1 2348462 R 258594 CDS NP_947437.1 39935161 2693359 complement(2349426..2350562) 1 NC_005296.1 citrate utilization protein B 2350562 2693359 RPA2092 Rhodopseudomonas palustris CGA009 citrate utilization protein B NP_947437.1 2349426 R 258594 CDS NP_947438.1 39935162 2693329 complement(2350549..2351847) 1 NC_005296.1 catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase 2351847 2693329 RPA2093 Rhodopseudomonas palustris CGA009 tricarballylate dehydrogenase NP_947438.1 2350549 R 258594 CDS NP_947439.1 39935163 2693312 2352419..2353483 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2353483 cobT1 2693312 cobT1 Rhodopseudomonas palustris CGA009 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase NP_947439.1 2352419 D 258594 CDS NP_947440.1 39935164 2693304 2353480..2354250 1 NC_005296.1 cobalamin (5`-phosphate) synthase 2354250 2693304 RPA2095 Rhodopseudomonas palustris CGA009 cobalamin (5`-phosphate) synthase NP_947440.1 2353480 D 258594 CDS NP_947441.1 39935165 2693214 2354337..2355911 1 NC_005296.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 2355911 cobQ2 2693214 cobQ2 Rhodopseudomonas palustris CGA009 cobyric acid synthase NP_947441.1 2354337 D 258594 CDS NP_947442.1 39935166 2693204 2355943..2356707 1 NC_005296.1 catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 2356707 cobF 2693204 cobF Rhodopseudomonas palustris CGA009 precorrin 6A synthase NP_947442.1 2355943 D 258594 CDS NP_947443.1 39935167 2693435 2356827..2357591 1 NC_005296.1 glutamine amidotransferase 2357591 2693435 RPA2098 Rhodopseudomonas palustris CGA009 glutamine amidotransferase NP_947443.1 2356827 D 258594 CDS NP_947444.1 39935168 2693466 complement(2357596..2359245) 1 NC_005296.1 MFS family diterpenoid transporter 2359245 2693466 RPA2099 Rhodopseudomonas palustris CGA009 MFS family diterpenoid transporter NP_947444.1 2357596 R 258594 CDS NP_947445.1 39935169 2693508 2359573..2360223 1 NC_005296.1 hydrolase 2360223 2693508 RPA2100 Rhodopseudomonas palustris CGA009 hydrolase NP_947445.1 2359573 D 258594 CDS NP_947446.1 39935170 2693193 2360535..2362415 1 NC_005296.1 hypothetical protein 2362415 2693193 RPA2101 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947446.1 2360535 D 258594 CDS NP_947447.1 39935171 2693289 2362417..2362842 1 NC_005296.1 hypothetical protein 2362842 2693289 RPA2102 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947447.1 2362417 D 258594 CDS NP_947448.1 39935172 2693299 2362862..2363782 1 NC_005296.1 hypothetical protein 2363782 2693299 RPA2103 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947448.1 2362862 D 258594 CDS NP_947449.1 39935173 2693220 2363779..2365212 1 NC_005296.1 hypothetical protein 2365212 2693220 RPA2104 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947449.1 2363779 D 258594 CDS NP_947450.1 39935174 2693582 complement(2365285..2366127) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; non-heme chloroperoxidase 2366127 2693582 RPA2105 Rhodopseudomonas palustris CGA009 non-heme chloroperoxidase NP_947450.1 2365285 R 258594 CDS NP_947451.1 39935175 2693570 complement(2366342..2367043) 1 NC_005296.1 hypothetical protein 2367043 2693570 RPA2106 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947451.1 2366342 R 258594 CDS NP_947452.1 39935176 2693392 complement(2367208..2372346) 1 NC_005296.1 sensor histidine kinase 2372346 2693392 RPA2107 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_947452.1 2367208 R 258594 CDS NP_947453.1 39935177 2693381 complement(2372333..2372719) 1 NC_005296.1 chemotaxis protein CheY 2372719 2693381 RPA2108 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_947453.1 2372333 R 258594 CDS NP_947454.1 39935178 2693568 complement(2372808..2373443) 1 NC_005296.1 LuxR family transcriptional regulator 2373443 2693568 RPA2109 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_947454.1 2372808 R 258594 CDS NP_947455.1 39935179 2693609 2373680..2374288 1 NC_005296.1 AraC family transcriptional regulator 2374288 2693609 RPA2110 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_947455.1 2373680 D 258594 CDS NP_947456.1 39935180 2693465 complement(2374328..2376253) 1 NC_005296.1 sigma-54-dependent transcriptional regulator 2376253 2693465 RPA2111 Rhodopseudomonas palustris CGA009 sigma-54-dependent transcriptional regulator NP_947456.1 2374328 R 258594 CDS NP_947457.1 39935181 2693458 2376415..2377803 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitrate transporter component nrtA 2377803 nrtA 2693458 nrtA Rhodopseudomonas palustris CGA009 nitrate transporter component nrtA NP_947457.1 2376415 D 258594 CDS NP_947458.1 39935182 2693456 2377950..2378789 1 NC_005296.1 nitrate transport system permease 2378789 nrtB 2693456 nrtB Rhodopseudomonas palustris CGA009 nitrate transport system permease NP_947458.1 2377950 D 258594 CDS NP_947459.1 39935183 2693514 2378795..2379682 1 NC_005296.1 nitrate transport system ATP-binding protein 2379682 nrtC1 2693514 nrtC1 Rhodopseudomonas palustris CGA009 nitrate transport system ATP-binding protein NP_947459.1 2378795 D 258594 CDS NP_947460.1 39935184 2693495 2379725..2380213 1 NC_005296.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 2380213 cynS 2693495 cynS Rhodopseudomonas palustris CGA009 cyanate hydratase NP_947460.1 2379725 D 258594 CDS NP_947461.1 39935185 2693492 complement(2380320..2380736) 1 NC_005296.1 hypothetical protein 2380736 2693492 RPA2116 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947461.1 2380320 R 258594 CDS NP_947462.1 39935186 2693490 complement(2380715..2381197) 1 NC_005296.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 2381197 2693490 RPA2117 Rhodopseudomonas palustris CGA009 flavodoxin FldA NP_947462.1 2380715 R 258594 CDS NP_947463.1 39935187 2693487 complement(2381400..2382206) 1 NC_005296.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 2382206 hmuV 2693487 hmuV Rhodopseudomonas palustris CGA009 hemin importer ATP-binding subunit NP_947463.1 2381400 R 258594 CDS NP_947464.1 39935188 2693536 complement(2382203..2383285) 1 NC_005296.1 transport system permease 2383285 2693536 RPA2119 Rhodopseudomonas palustris CGA009 transport system permease NP_947464.1 2382203 R 258594 CDS NP_947465.1 39935189 2693364 complement(2383282..2384253) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; periplasmic binding protein 2384253 2693364 RPA2120 Rhodopseudomonas palustris CGA009 periplasmic binding protein NP_947465.1 2383282 R 258594 CDS NP_947466.1 39935190 2693356 complement(2384250..2384453) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2384453 2693356 RPA2121 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947466.1 2384250 R 258594 CDS NP_947467.1 39935191 2693353 2384786..2386246 1 NC_005296.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2386246 2693353 RPA2122 Rhodopseudomonas palustris CGA009 coproporphyrinogen III oxidase NP_947467.1 2384786 D 258594 CDS NP_947468.1 39935192 2693354 2386234..2386905 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2386905 2693354 RPA2123 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947468.1 2386234 D 258594 CDS NP_947469.1 39935193 2693401 2387123..2389462 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; tonB dependent iron siderophore receptor 2389462 2693401 RPA2124 Rhodopseudomonas palustris CGA009 tonB dependent iron siderophore receptor NP_947469.1 2387123 D 258594 CDS NP_947470.1 39935194 2693560 2389539..2389871 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; antibiotic biosynthesis monooxygenase 2389871 2693560 RPA2125 Rhodopseudomonas palustris CGA009 antibiotic biosynthesis monooxygenase NP_947470.1 2389539 D 258594 CDS NP_947471.1 39935195 2693309 2389888..2390424 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2390424 2693309 RPA2126 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947471.1 2389888 D 258594 CDS NP_947472.1 39935196 2693311 2390417..2391214 1 NC_005296.1 enterochelin uptake protein ExbB 2391214 exbB3 2693311 exbB3 Rhodopseudomonas palustris CGA009 enterochelin uptake protein ExbB NP_947472.1 2390417 D 258594 CDS NP_947473.1 39935197 2693276 2391220..2391657 1 NC_005296.1 biopolymer transport protein ExbD/TolR 2391657 exbD3 2693276 exbD3 Rhodopseudomonas palustris CGA009 biopolymer transport protein ExbD/TolR NP_947473.1 2391220 D 258594 CDS NP_947474.1 39935198 2693346 2391654..2392511 1 NC_005296.1 energy transducer TonB C-terminal region 2392511 2693346 RPA2129 Rhodopseudomonas palustris CGA009 energy transducer TonB C-terminal region NP_947474.1 2391654 D 258594 CDS NP_947475.1 39935199 2693352 complement(2393564..2394370) 1 NC_005296.1 hypothetical protein 2394370 2693352 RPA2130 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947475.1 2393564 R 258594 CDS NP_947476.1 39935200 2693533 2394921..2396003 1 NC_005296.1 hypothetical protein 2396003 2693533 RPA2131 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947476.1 2394921 D 258594 CDS NP_947477.1 39935201 2693449 2396132..2397517 1 NC_005296.1 hypothetical protein 2397517 2693449 RPA2132 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947477.1 2396132 D 258594 CDS NP_947478.1 39935202 2693454 2397522..2398313 1 NC_005296.1 hypothetical protein 2398313 2693454 RPA2133 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947478.1 2397522 D 258594 CDS NP_947479.1 39935203 2693363 2398474..2398917 1 NC_005296.1 hypothetical protein 2398917 2693363 RPA2134 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947479.1 2398474 D 258594 CDS NP_947480.1 39935204 2693350 complement(2398973..2401096) 1 NC_005296.1 sensor histidine kinase 2401096 2693350 RPA2135 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_947480.1 2398973 R 258594 CDS NP_947481.1 39935205 2693219 2401317..2401631 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome C 2401631 2693219 RPA2136 Rhodopseudomonas palustris CGA009 cytochrome C NP_947481.1 2401317 D 258594 CDS NP_947482.1 39935206 2693509 2401734..2402873 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 2402873 2693509 RPA2137 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_947482.1 2401734 D 258594 CDS NP_947483.1 39935207 2693314 2403023..2404177 1 NC_005296.1 acyl-CoA dehydrogenase 2404177 2693314 RPA2138 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_947483.1 2403023 D 258594 CDS NP_947484.1 39935208 2693305 2404371..2405069 1 NC_005296.1 glutathione S-transferase 2405069 2693305 RPA2139 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_947484.1 2404371 D 258594 CDS NP_947485.1 39935209 2693297 2405234..2406058 1 NC_005296.1 AraC family transcriptional regulator 2406058 2693297 RPA2140 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_947485.1 2405234 D 258594 CDS NP_947486.1 39935210 2693451 2406179..2407045 1 NC_005296.1 hypothetical protein 2407045 2693451 RPA2141 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947486.1 2406179 D 258594 CDS NP_947487.1 39935211 2693583 2407213..2408817 1 NC_005296.1 fatty-acid--CoA ligase 2408817 2693583 RPA2142 Rhodopseudomonas palustris CGA009 fatty-acid--CoA ligase NP_947487.1 2407213 D 258594 CDS NP_947488.1 39935212 2693383 2409057..2410679 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; propionyl-CoA carboxylase 2410679 2693383 RPA2143 Rhodopseudomonas palustris CGA009 propionyl-CoA carboxylase NP_947488.1 2409057 D 258594 CDS NP_947489.1 39935213 2693282 2410676..2412658 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbamoyl-phosphate synthase L chain ATP-binding 2412658 2693282 RPA2144 Rhodopseudomonas palustris CGA009 carbamoyl-phosphate synthase L chain ATP-binding NP_947489.1 2410676 D 258594 CDS NP_947490.1 39935214 2693330 2412778..2413557 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2413557 2693330 RPA2145 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_947490.1 2412778 D 258594 CDS NP_947491.1 39935215 2693280 2413733..2415271 1 NC_005296.1 long-chain-fatty-acid--CoA ligase 2415271 2693280 RPA2146 Rhodopseudomonas palustris CGA009 long-chain-fatty-acid--CoA ligase NP_947491.1 2413733 D 258594 CDS NP_947492.1 39935216 2693269 2415426..2416820 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2416820 2693269 RPA2147 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947492.1 2415426 D 258594 CDS NP_947493.1 39935217 2693371 complement(2416916..2418184) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-lactamase 2418184 2693371 RPA2148 Rhodopseudomonas palustris CGA009 beta-lactamase NP_947493.1 2416916 R 258594 CDS NP_947494.1 39935218 2693366 2418328..2419320 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydroxyquinol 1,2-dioxygenase 2419320 2693366 RPA2149 Rhodopseudomonas palustris CGA009 hydroxyquinol 1,2-dioxygenase NP_947494.1 2418328 D 258594 CDS NP_947495.1 39935219 2693467 2419351..2420184 1 NC_005296.1 oxidoreductase 2420184 2693467 RPA2150 Rhodopseudomonas palustris CGA009 oxidoreductase NP_947495.1 2419351 D 258594 CDS NP_947496.1 39935220 2693348 2420403..2421317 1 NC_005296.1 DMT family permease 2421317 2693348 RPA2151 Rhodopseudomonas palustris CGA009 DMT family permease NP_947496.1 2420403 D 258594 CDS NP_947497.1 39935221 2693153 2421412..2423541 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 2423541 2693153 RPA2152 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_947497.1 2421412 D 258594 CDS NP_947498.1 39935222 2693525 2423788..2425218 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; aldehyde dehydrogenase 2425218 2693525 RPA2153 Rhodopseudomonas palustris CGA009 aldehyde dehydrogenase NP_947498.1 2423788 D 258594 CDS NP_947499.1 39935223 2693444 2425291..2426538 1 NC_005296.1 acyltransferase 2426538 2693444 RPA2154 Rhodopseudomonas palustris CGA009 acyltransferase NP_947499.1 2425291 D 258594 CDS NP_947500.1 39935224 2693377 2426865..2428571 1 NC_005296.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2428571 ilvD3 2693377 ilvD3 Rhodopseudomonas palustris CGA009 dihydroxy-acid dehydratase NP_947500.1 2426865 D 258594 CDS NP_947501.1 39935225 2693284 complement(2428576..2428854) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2428854 2693284 RPA2156 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947501.1 2428576 R 258594 CDS NP_947502.1 39935226 2693157 2429253..2430449 1 NC_005296.1 hypothetical protein 2430449 2693157 RPA2157 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947502.1 2429253 D 258594 CDS NP_947503.1 39935227 2693313 2430585..2430914 1 NC_005296.1 hypothetical protein 2430914 2693313 RPA2158 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947503.1 2430585 D 258594 CDS NP_947504.1 39935228 2693294 complement(2431025..2431339) 1 NC_005296.1 hypothetical protein 2431339 2693294 RPA2159 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947504.1 2431025 R 258594 CDS NP_947505.1 39935229 2693374 complement(2431465..2432214) 1 NC_005296.1 short-chain dehydrogenase/reductase SDR 2432214 2693374 RPA2160 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_947505.1 2431465 R 258594 CDS NP_947506.1 39935230 2693218 2432327..2432641 1 NC_005296.1 ArsR family transcriptional regulator 2432641 2693218 RPA2161 Rhodopseudomonas palustris CGA009 ArsR family transcriptional regulator NP_947506.1 2432327 D 258594 CDS NP_947507.1 39935231 2693358 2433296..2436136 1 NC_005296.1 serine protease/outer membrane autotransporter 2436136 2693358 RPA2162 Rhodopseudomonas palustris CGA009 serine protease/outer membrane autotransporter NP_947507.1 2433296 D 258594 CDS NP_947508.1 39935232 2693463 complement(2436196..2436882) 1 NC_005296.1 SecC motif-containing protein 2436882 2693463 RPA2163 Rhodopseudomonas palustris CGA009 SecC motif-containing protein NP_947508.1 2436196 R 258594 CDS NP_947509.1 39935233 2693208 complement(2437219..2438862) 1 NC_005296.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is co-regulated with symbiotic nitrogen fixation genes; molecular chaperone GroEL 2438862 groEL 2693208 groEL Rhodopseudomonas palustris CGA009 molecular chaperone GroEL NP_947509.1 2437219 R 258594 CDS NP_947510.1 39935234 2693592 complement(2439028..2439342) 1 NC_005296.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2439342 groES 2693592 groES Rhodopseudomonas palustris CGA009 co-chaperonin GroES NP_947510.1 2439028 R 258594 CDS NP_947511.1 39935235 2693155 2439785..2440069 1 NC_005296.1 hypothetical protein 2440069 2693155 RPA2166 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947511.1 2439785 D 258594 CDS NP_947512.1 39935236 2693372 complement(2440210..2441895) 1 NC_005296.1 hypothetical protein 2441895 2693372 RPA2167 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947512.1 2440210 R 258594 CDS NP_947513.1 39935237 2693526 complement(2442142..2443392) 1 NC_005296.1 Citation: Saier et al. BBA 1422:1-56, 1999; H+/nucleoside symporter 2443392 2693526 RPA2168 Rhodopseudomonas palustris CGA009 H+/nucleoside symporter NP_947513.1 2442142 R 258594 CDS NP_947514.1 39935238 2693425 2443567..2444673 1 NC_005296.1 ribulose bisphosphate carboxylase-like protein 2444673 rlp1 2693425 rlp1 Rhodopseudomonas palustris CGA009 ribulose bisphosphate carboxylase-like protein NP_947514.1 2443567 D 258594 CDS NP_947515.1 39935239 2693152 2444663..2445160 1 NC_005296.1 hypothetical protein 2445160 2693152 RPA2170 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947515.1 2444663 D 258594 CDS NP_947516.1 39935240 2693489 2445677..2446480 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2446480 2693489 RPA2171 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947516.1 2445677 D 258594 CDS NP_947517.1 39935241 2693351 complement(2446500..2447258) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 2447258 2693351 RPA2172 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_947517.1 2446500 R 258594 CDS NP_947518.1 39935242 2693569 complement(2447291..2447791) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; GCN5-like N-acetyltransferase 2447791 2693569 RPA2173 Rhodopseudomonas palustris CGA009 GCN5-like N-acetyltransferase NP_947518.1 2447291 R 258594 CDS NP_947519.1 39935243 2693285 complement(2447810..2448556) 1 NC_005296.1 proteasome-type protease 2448556 2693285 RPA2174 Rhodopseudomonas palustris CGA009 proteasome-type protease NP_947519.1 2447810 R 258594 CDS NP_947520.1 39935244 2693232 complement(2448770..2449597) 1 NC_005296.1 transglutaminase 2449597 2693232 RPA2175 Rhodopseudomonas palustris CGA009 transglutaminase NP_947520.1 2448770 R 258594 CDS NP_947521.1 39935245 2693209 complement(2449647..2450591) 1 NC_005296.1 hypothetical protein 2450591 2693209 RPA2176 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947521.1 2449647 R 258594 CDS NP_947522.1 39935246 2693221 complement(2450743..2452161) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2452161 2693221 RPA2177 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947522.1 2450743 R 258594 CDS NP_947523.1 39935247 2693205 2452385..2453122 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; molybdopterin binding domain-containing protein 2453122 2693205 RPA2178 Rhodopseudomonas palustris CGA009 molybdopterin binding domain-containing protein NP_947523.1 2452385 D 258594 CDS NP_947524.1 39935248 2693174 2453243..2453797 1 NC_005296.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 2453797 2693174 RPA2179 Rhodopseudomonas palustris CGA009 xanthine-guanine phosphoribosyltransferase NP_947524.1 2453243 D 258594 CDS NP_947525.1 39935249 2693177 2454102..2454776 1 NC_005296.1 hypothetical protein 2454776 2693177 RPA2180 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947525.1 2454102 D 258594 CDS NP_947526.1 39935250 2693185 complement(2454971..2455993) 1 NC_005296.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2455993 2693185 RPA2181 Rhodopseudomonas palustris CGA009 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase NP_947526.1 2454971 R 258594 CDS NP_947527.1 39935251 2693558 2456070..2456864 1 NC_005296.1 glutathione S-transferase 2456864 2693558 RPA2182 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_947527.1 2456070 D 258594 CDS NP_947528.1 39935252 2693540 2457284..2457904 1 NC_005296.1 DSBA oxidoreductase 2457904 2693540 RPA2183 Rhodopseudomonas palustris CGA009 DSBA oxidoreductase NP_947528.1 2457284 D 258594 CDS NP_947529.1 39935253 2693485 2457904..2458878 1 NC_005296.1 oxidoreductase 2458878 2693485 RPA2184 Rhodopseudomonas palustris CGA009 oxidoreductase NP_947529.1 2457904 D 258594 CDS NP_947530.1 39935254 2693453 2458970..2459437 1 NC_005296.1 acyl dehydratase 2459437 2693453 RPA2185 Rhodopseudomonas palustris CGA009 acyl dehydratase NP_947530.1 2458970 D 258594 CDS NP_947531.1 39935255 2693370 2459456..2460373 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 2460373 2693370 RPA2186 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_947531.1 2459456 D 258594 CDS NP_947532.1 39935256 2693360 2460577..2461812 1 NC_005296.1 hypothetical protein 2461812 2693360 RPA2187 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947532.1 2460577 D 258594 CDS NP_947533.1 39935257 2693336 complement(2461819..2462145) 1 NC_005296.1 hypothetical protein 2462145 2693336 RPA2188 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947533.1 2461819 R 258594 CDS NP_947534.1 39935258 2693273 complement(2462142..2462798) 1 NC_005296.1 TetR family transcriptional regulator 2462798 2693273 RPA2189 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_947534.1 2462142 R 258594 CDS NP_947535.1 39935259 2693395 complement(2462902..2464719) 1 NC_005296.1 ABC transporter ATPase 2464719 2693395 RPA2190 Rhodopseudomonas palustris CGA009 ABC transporter ATPase NP_947535.1 2462902 R 258594 CDS NP_947536.1 39935260 2693301 complement(2464730..2465206) 1 NC_005296.1 hypothetical protein 2465206 2693301 RPA2191 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947536.1 2464730 R 258594 CDS NP_947537.1 39935261 2690896 2465309..2466109 1 NC_005296.1 hypothetical protein 2466109 2690896 RPA2192 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947537.1 2465309 D 258594 CDS NP_947538.1 39935262 2688832 2466304..2467518 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter perplasmic binding protein 2467518 2688832 RPA2193 Rhodopseudomonas palustris CGA009 ABC transporter perplasmic binding protein NP_947538.1 2466304 D 258594 CDS NP_947539.1 39935263 2690782 complement(2467751..2470255) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbon-monoxide dehydrogenase large subunit 2470255 2690782 RPA2194 Rhodopseudomonas palustris CGA009 carbon-monoxide dehydrogenase large subunit NP_947539.1 2467751 R 258594 CDS NP_947540.1 39935264 2690855 2470320..2471435 1 NC_005296.1 Ppx/GppA phosphatase 2471435 2690855 RPA2195 Rhodopseudomonas palustris CGA009 Ppx/GppA phosphatase NP_947540.1 2470320 D 258594 CDS NP_947541.1 39935265 2690843 complement(2471462..2472175) 1 NC_005296.1 hypothetical protein 2472175 2690843 RPA2196 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947541.1 2471462 R 258594 CDS NP_947542.1 39935266 2690930 2472235..2472948 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ribosomal RNA methyltransferase RrmJ/FtsJ 2472948 2690930 RPA2197 Rhodopseudomonas palustris CGA009 ribosomal RNA methyltransferase RrmJ/FtsJ NP_947542.1 2472235 D 258594 CDS NP_947543.1 39935267 2690668 complement(2473309..2474886) 1 NC_005296.1 multidrug efflux protein 2474886 2690668 RPA2198 Rhodopseudomonas palustris CGA009 multidrug efflux protein NP_947543.1 2473309 R 258594 CDS NP_947544.1 39935268 2690612 2474976..2475224 1 NC_005296.1 hypothetical protein 2475224 2690612 RPA2199 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947544.1 2474976 D 258594 CDS NP_947545.1 39935269 2690644 2475578..2477074 1 NC_005296.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 2477074 guaB 2690644 guaB Rhodopseudomonas palustris CGA009 inosine 5'-monophosphate dehydrogenase NP_947545.1 2475578 D 258594 CDS NP_947546.1 39935270 2693042 2477373..2478398 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; quinone oxidoreductase 2478398 2693042 RPA2201 Rhodopseudomonas palustris CGA009 quinone oxidoreductase NP_947546.1 2477373 D 258594 CDS NP_947547.1 39935271 2690956 2478589..2479890 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; SUN-family protein, RNA methyltransferase 2479890 2690956 RPA2202 Rhodopseudomonas palustris CGA009 SUN-family protein, RNA methyltransferase NP_947547.1 2478589 D 258594 CDS NP_947548.1 39935272 2693062 2480182..2481804 1 NC_005296.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2481804 guaA 2693062 guaA Rhodopseudomonas palustris CGA009 GMP synthase NP_947548.1 2480182 D 258594 CDS NP_947549.1 39935273 2693026 2482087..2483343 1 NC_005296.1 integrase 2483343 2693026 RPA2204 Rhodopseudomonas palustris CGA009 integrase NP_947549.1 2482087 D 258594 CDS NP_947550.1 39935274 2690569 complement(2483315..2483662) 1 NC_005296.1 hypothetical protein 2483662 2690569 RPA2205 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947550.1 2483315 R 258594 CDS NP_947551.1 39935275 2693028 complement(2483746..2484126) 1 NC_005296.1 hypothetical protein 2484126 2693028 RPA2206 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947551.1 2483746 R 258594 CDS NP_947552.1 39935276 2692967 2484202..2485770 1 NC_005296.1 recombinase 2485770 2692967 RPA2207 Rhodopseudomonas palustris CGA009 recombinase NP_947552.1 2484202 D 258594 CDS NP_947553.1 39935277 2692944 2485767..2486651 1 NC_005296.1 ParB-like partioning protein 2486651 parB2 2692944 parB2 Rhodopseudomonas palustris CGA009 ParB-like partioning protein NP_947553.1 2485767 D 258594 CDS NP_947554.1 39935278 2689882 2486653..2487543 1 NC_005296.1 ParB-like nuclease 2487543 2689882 RPA2209 Rhodopseudomonas palustris CGA009 ParB-like nuclease NP_947554.1 2486653 D 258594 CDS NP_947555.1 39935279 2688828 2487834..2489702 1 NC_005296.1 hypothetical protein 2489702 2688828 RPA2210 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947555.1 2487834 D 258594 CDS NP_947556.1 39935280 2692920 complement(2489714..2492842) 1 NC_005296.1 DEAD/DEAH box helicase 2492842 2692920 RPA2211 Rhodopseudomonas palustris CGA009 DEAD/DEAH box helicase NP_947556.1 2489714 R 258594 CDS NP_947557.1 39935281 2692902 complement(2492832..2494688) 1 NC_005296.1 hypothetical protein 2494688 2692902 RPA2212 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947557.1 2492832 R 258594 CDS NP_947558.1 39935282 2692839 complement(2494678..2495862) 1 NC_005296.1 hypothetical protein 2495862 2692839 RPA2213 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947558.1 2494678 R 258594 CDS NP_947559.1 39935283 2691073 complement(2495915..2499256) 1 NC_005296.1 helicase 2499256 2691073 RPA2214 Rhodopseudomonas palustris CGA009 helicase NP_947559.1 2495915 R 258594 CDS NP_947560.1 39935284 2692879 complement(2499276..2502677) 1 NC_005296.1 ATP-dependent exodeoxyribonuclease subunit A 2502677 2692879 RPA2215 Rhodopseudomonas palustris CGA009 ATP-dependent exodeoxyribonuclease subunit A NP_947560.1 2499276 R 258594 CDS NP_947561.1 39935285 2692796 complement(2502677..2505340) 1 NC_005296.1 hypothetical protein 2505340 2692796 RPA2216 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947561.1 2502677 R 258594 CDS NP_947562.1 39935286 2691040 2505626..2506510 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2506510 2691040 RPA2217 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947562.1 2505626 D 258594 CDS NP_947563.1 39935287 2691023 2506544..2510062 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ATP-dependent RNA helicase 2510062 2691023 RPA2218 Rhodopseudomonas palustris CGA009 ATP-dependent RNA helicase NP_947563.1 2506544 D 258594 CDS NP_947564.1 39935288 2692786 2510059..2514300 1 NC_005296.1 ATPase 2514300 2692786 RPA2219 Rhodopseudomonas palustris CGA009 ATPase NP_947564.1 2510059 D 258594 CDS NP_947565.1 39935289 2692778 2514284..2517118 1 NC_005296.1 hypothetical protein 2517118 2692778 RPA2220 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947565.1 2514284 D 258594 CDS NP_947566.1 39935290 2689951 2517132..2520431 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2520431 2689951 RPA2221 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947566.1 2517132 D 258594 CDS NP_947567.1 39935291 2692745 2520519..2521466 1 NC_005296.1 LysR family transcriptional regulator 2521466 2692745 RPA2222 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_947567.1 2520519 D 258594 CDS NP_947568.1 39935292 2692741 complement(2521433..2521681) 1 NC_005296.1 hypothetical protein 2521681 2692741 RPA2223 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947568.1 2521433 R 258594 CDS NP_947569.1 39935293 2689970 complement(2521686..2522930) 1 NC_005296.1 type IV secretion system subunit TrbI 2522930 trbI1 2689970 trbI1 Rhodopseudomonas palustris CGA009 type IV secretion system subunit TrbI NP_947569.1 2521686 R 258594 CDS NP_947570.1 39935294 2692731 complement(2522927..2523928) 1 NC_005296.1 conjugal transfer protein TrbG 2523928 trbG1 2692731 trbG1 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbG NP_947570.1 2522927 R 258594 CDS NP_947571.1 39935295 2688854 complement(2523928..2524614) 1 NC_005296.1 conjugal transfer protein TrbF 2524614 trbF1 2688854 trbF1 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbF NP_947571.1 2523928 R 258594 CDS NP_947572.1 39935296 2692679 complement(2524611..2525909) 1 NC_005296.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 2525909 trbL 2692679 trbL Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbL NP_947572.1 2524611 R 258594 CDS NP_947573.1 39935297 2689041 complement(2525909..2526256) 1 NC_005296.1 hypothetical protein 2526256 trbK 2689041 trbK Rhodopseudomonas palustris CGA009 hypothetical protein NP_947573.1 2525909 R 258594 CDS NP_947574.1 39935298 2688957 complement(2526265..2527008) 1 NC_005296.1 conjugal transfer protein TrbJ 2527008 trbJ 2688957 trbJ Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbJ NP_947574.1 2526265 R 258594 CDS NP_947575.1 39935299 2692594 complement(2527005..2529452) 1 NC_005296.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 2529452 trbE1 2692594 trbE1 Rhodopseudomonas palustris CGA009 conjugal transfer ATPase TrbE NP_947575.1 2527005 R 258594 CDS NP_947576.1 39935300 2692651 complement(2529449..2529721) 1 NC_005296.1 conjugal transfer protein TrbD 2529721 trbD 2692651 trbD Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbD NP_947576.1 2529449 R 258594 CDS NP_947577.1 39935301 2692585 complement(2529721..2530038) 1 NC_005296.1 conjugal transfer protein; TrbC 2530038 trbC1 2692585 trbC1 Rhodopseudomonas palustris CGA009 conjugal transfer protein; TrbC NP_947577.1 2529721 R 258594 CDS NP_947578.1 39935302 2692603 complement(2530035..2531018) 1 NC_005296.1 conjugal transfer protein TrbB 2531018 trbB1 2692603 trbB1 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbB NP_947578.1 2530035 R 258594 CDS NP_947579.1 39935303 2692492 complement(2531155..2531598) 1 NC_005296.1 hypothetical protein 2531598 2692492 RPA2234 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947579.1 2531155 R 258594 CDS NP_947580.1 39935304 2690423 complement(2531595..2533598) 1 NC_005296.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 2533598 traG2 2690423 traG2 Rhodopseudomonas palustris CGA009 conjugal transfer coupling protein TraG NP_947580.1 2531595 R 258594 CDS NP_947581.1 39935305 2690383 complement(2533709..2535463) 1 NC_005296.1 hypothetical protein 2535463 2690383 RPA2236 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947581.1 2533709 R 258594 CDS NP_947582.1 39935306 2692477 complement(2535732..2536574) 1 NC_005296.1 lytic transglycosylase 2536574 2692477 RPA2237 Rhodopseudomonas palustris CGA009 lytic transglycosylase NP_947582.1 2535732 R 258594 CDS NP_947583.1 39935307 2692465 complement(2537089..2537562) 1 NC_005296.1 hypothetical protein 2537562 2692465 RPA2238 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947583.1 2537089 R 258594 CDS NP_947584.1 39935308 2690395 complement(2537801..2538439) 1 NC_005296.1 partition protein 2538439 2690395 RPA2239 Rhodopseudomonas palustris CGA009 partition protein NP_947584.1 2537801 R 258594 CDS NP_947585.1 39935309 2692389 complement(2538642..2539544) 1 NC_005296.1 replication protein A 2539544 2692389 RPA2240 Rhodopseudomonas palustris CGA009 replication protein A NP_947585.1 2538642 R 258594 CDS NP_947586.1 39935310 2692445 complement(2539976..2540539) 1 NC_005296.1 hypothetical protein 2540539 2692445 RPA2241 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947586.1 2539976 R 258594 CDS NP_947587.1 39935311 2692430 complement(2540885..2541145) 1 NC_005296.1 hypothetical protein 2541145 2692430 RPA2242 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947587.1 2540885 R 258594 CDS NP_947588.1 39935312 2690365 2541339..2541584 1 NC_005296.1 XRE family transcriptional regulator 2541584 2690365 RPA2243 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_947588.1 2541339 D 258594 CDS NP_947589.1 39935313 2690341 complement(2541653..2541976) 1 NC_005296.1 hypothetical protein 2541976 2690341 RPA2244 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947589.1 2541653 R 258594 CDS NP_947590.1 39935314 2692396 complement(2542604..2543107) 1 NC_005296.1 hypothetical protein 2543107 2692396 RPA2245 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947590.1 2542604 R 258594 CDS NP_947591.1 39935315 2690271 2543519..2543944 1 NC_005296.1 hypothetical protein 2543944 2690271 RPA2246 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947591.1 2543519 D 258594 CDS NP_947592.1 39935316 2690272 complement(2543965..2545224) 1 NC_005296.1 hypothetical protein 2545224 2690272 RPA2247 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947592.1 2543965 R 258594 CDS NP_947593.1 39935317 2690266 complement(2545228..2546292) 1 NC_005296.1 hypothetical protein 2546292 2690266 RPA2248 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947593.1 2545228 R 258594 CDS NP_947594.1 39935318 2692328 complement(2546279..2550634) 1 NC_005296.1 methylase/helicase 2550634 2692328 RPA2249 Rhodopseudomonas palustris CGA009 methylase/helicase NP_947594.1 2546279 R 258594 CDS NP_947595.1 39935319 2690218 complement(2550722..2551054) 1 NC_005296.1 hypothetical protein 2551054 2690218 RPA2250 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947595.1 2550722 R 258594 CDS NP_947596.1 39935320 2690203 complement(2551051..2553156) 1 NC_005296.1 plasmid stabilization protein 2553156 2690203 RPA2251 Rhodopseudomonas palustris CGA009 plasmid stabilization protein NP_947596.1 2551051 R 258594 CDS NP_947597.1 39935321 2692298 complement(2553276..2554220) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ardC antirestriction protein 2554220 2692298 RPA2252 Rhodopseudomonas palustris CGA009 ardC antirestriction protein NP_947597.1 2553276 R 258594 CDS NP_947598.1 39935322 2692251 2554308..2555078 1 NC_005296.1 hypothetical protein 2555078 2692251 RPA2253 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947598.1 2554308 D 258594 CDS NP_947599.1 39935323 2692232 complement(2555371..2556099) 1 NC_005296.1 hypothetical protein 2556099 2692232 RPA2254 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947599.1 2555371 R 258594 CDS NP_947600.1 39935324 2689112 complement(2556144..2556767) 1 NC_005296.1 hypothetical protein 2556767 2689112 RPA2255 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947600.1 2556144 R 258594 CDS NP_947601.1 39935325 2690982 2557368..2557700 1 NC_005296.1 ArsR family transcriptional regulator 2557700 2690982 RPA2256 Rhodopseudomonas palustris CGA009 ArsR family transcriptional regulator NP_947601.1 2557368 D 258594 CDS NP_947602.1 39935326 2692157 2557712..2558140 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; arsenate reductase 2558140 arsC1 2692157 arsC1 Rhodopseudomonas palustris CGA009 arsenate reductase NP_947602.1 2557712 D 258594 CDS NP_947603.1 39935327 2692190 2558140..2559423 1 NC_005296.1 arsenical pump membrane protein 2559423 arsB 2692190 arsB Rhodopseudomonas palustris CGA009 arsenical pump membrane protein NP_947603.1 2558140 D 258594 CDS NP_947604.1 39935328 2690164 2559423..2560178 1 NC_005296.1 arsenical resistance protein ArsH 2560178 arsH 2690164 arsH Rhodopseudomonas palustris CGA009 arsenical resistance protein ArsH NP_947604.1 2559423 D 258594 CDS NP_947605.1 39935329 2691520 2560618..2564379 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; viral RNA helicase 2564379 2691520 RPA2260 Rhodopseudomonas palustris CGA009 viral RNA helicase NP_947605.1 2560618 D 258594 CDS NP_947606.1 39935330 2692084 2564583..2564822 1 NC_005296.1 GMP synthase 2564822 2692084 RPA2261 Rhodopseudomonas palustris CGA009 GMP synthase NP_947606.1 2564583 D 258594 CDS NP_947607.1 39935331 2691989 complement(2565446..2566642) 1 NC_005296.1 glutamate permease 2566642 gltS 2691989 gltS Rhodopseudomonas palustris CGA009 glutamate permease NP_947607.1 2565446 R 258594 CDS NP_947608.1 39935332 2692022 complement(2566820..2567248) 1 NC_005296.1 plasmid stabilization protein 2567248 2692022 RPA2263 Rhodopseudomonas palustris CGA009 plasmid stabilization protein NP_947608.1 2566820 R 258594 CDS NP_947609.1 39935333 2691928 complement(2567248..2567742) 1 NC_005296.1 hypothetical protein 2567742 2691928 RPA2264 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947609.1 2567248 R 258594 CDS NP_947610.1 39935334 2690148 complement(2567739..2568734) 1 NC_005296.1 hypothetical protein 2568734 2690148 RPA2265 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947610.1 2567739 R 258594 CDS NP_947611.1 39935335 2688829 2568791..2569447 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutathione S-transferase 2569447 gst1 2688829 gst1 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_947611.1 2568791 D 258594 CDS NP_947612.1 39935336 2689163 2569676..2570119 1 NC_005296.1 hypothetical protein 2570119 2689163 RPA2267 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947612.1 2569676 D 258594 CDS NP_947613.1 39935337 2691895 2570195..2570755 1 NC_005296.1 flavin reductase-like protein 2570755 2691895 RPA2268 Rhodopseudomonas palustris CGA009 flavin reductase-like protein NP_947613.1 2570195 D 258594 CDS NP_947614.1 39935338 2691899 complement(2570803..2572605) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2572605 2691899 RPA2269 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947614.1 2570803 R 258594 CDS NP_947615.1 39935339 2691906 complement(2572793..2573764) 1 NC_005296.1 hypothetical protein 2573764 2691906 RPA2270 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947615.1 2572793 R 258594 CDS NP_947616.1 39935340 2690059 complement(2573878..2575062) 1 NC_005296.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2575062 2690059 RPA2271 Rhodopseudomonas palustris CGA009 pyruvate kinase NP_947616.1 2573878 R 258594 CDS NP_947617.1 39935341 2690065 2575540..2575887 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2575887 2690065 RPA2272 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947617.1 2575540 D 258594 CDS NP_947618.1 39935342 2690076 2576083..2576379 1 NC_005296.1 hypothetical protein 2576379 2690076 RPA2273 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947618.1 2576083 D 258594 CDS NP_947619.1 39935343 2690974 2576370..2576729 1 NC_005296.1 hypothetical protein 2576729 2690974 RPA2274 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947619.1 2576370 D 258594 CDS NP_947620.1 39935344 2690018 2576915..2577670 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter ATP-binding protein 2577670 2690018 RPA2275 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_947620.1 2576915 D 258594 CDS NP_947621.1 39935345 2690036 2577663..2578409 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter ATP-binding protein 2578409 2690036 RPA2276 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_947621.1 2577663 D 258594 CDS NP_947622.1 39935346 2691863 2578448..2579323 1 NC_005296.1 inner-membrane translocator 2579323 2691863 RPA2277 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_947622.1 2578448 D 258594 CDS NP_947623.1 39935347 2689720 2579325..2580296 1 NC_005296.1 inner-membrane translocator 2580296 2689720 RPA2278 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_947623.1 2579325 D 258594 CDS NP_947624.1 39935348 2691397 complement(2580448..2583054) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2583054 2691397 RPA2279 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947624.1 2580448 R 258594 CDS NP_947625.1 39935349 2691831 2583631..2584275 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2584275 2691831 RPA2280 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947625.1 2583631 D 258594 CDS NP_947626.1 39935350 2691837 2584290..2585306 1 NC_005296.1 phosphate transporter 2585306 2691837 RPA2281 Rhodopseudomonas palustris CGA009 phosphate transporter NP_947626.1 2584290 D 258594 CDS NP_947627.1 39935351 2689392 complement(2585324..2585635) 1 NC_005296.1 hypothetical protein 2585635 2689392 RPA2282 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947627.1 2585324 R 258594 CDS NP_947628.1 39935352 2691765 complement(2585678..2585953) 1 NC_005296.1 proteic killer suppression protein 2585953 2691765 RPA2283 Rhodopseudomonas palustris CGA009 proteic killer suppression protein NP_947628.1 2585678 R 258594 CDS NP_947629.1 39935353 2691773 complement(2586042..2586356) 1 NC_005296.1 drug efflux protein 2586356 2691773 RPA2284 Rhodopseudomonas palustris CGA009 drug efflux protein NP_947629.1 2586042 R 258594 CDS NP_947630.1 39935354 2689946 2586587..2588212 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptide chain release factor 3 2588212 prfC 2689946 prfC Rhodopseudomonas palustris CGA009 peptide chain release factor 3 NP_947630.1 2586587 D 258594 CDS NP_947631.1 39935355 2689913 complement(2589207..2590193) 1 NC_005296.1 hypothetical protein 2590193 2689913 RPA2286 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947631.1 2589207 R 258594 CDS NP_947632.1 39935356 2691736 2590350..2591336 1 NC_005296.1 hypothetical protein 2591336 2691736 RPA2287 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947632.1 2590350 D 258594 CDS NP_947633.1 39935357 2689898 complement(2591445..2591903) 1 NC_005296.1 cyclase 2591903 2689898 RPA2288 Rhodopseudomonas palustris CGA009 cyclase NP_947633.1 2591445 R 258594 CDS NP_947634.1 39935358 2691222 2592184..2593512 1 NC_005296.1 hypothetical protein 2593512 2691222 RPA2289 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947634.1 2592184 D 258594 CDS NP_947635.1 39935359 2691218 2593524..2595245 1 NC_005296.1 hypothetical protein 2595245 2691218 RPA2290 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947635.1 2593524 D 258594 CDS NP_947636.1 39935360 2691681 2595381..2597675 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; adenylate/guanylate cyclase 2597675 2691681 RPA2291 Rhodopseudomonas palustris CGA009 adenylate/guanylate cyclase NP_947636.1 2595381 D 258594 CDS NP_947637.1 39935361 2691163 complement(2597690..2599114) 1 NC_005296.1 multi-sensor signal transduction histidine kinase 2599114 2691163 RPA2292 Rhodopseudomonas palustris CGA009 multi-sensor signal transduction histidine kinase NP_947637.1 2597690 R 258594 CDS NP_947638.1 39935362 2691414 complement(2599302..2599898) 1 NC_005296.1 hypothetical protein 2599898 2691414 RPA2293 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947638.1 2599302 R 258594 CDS NP_947639.1 39935363 2688857 2600118..2600813 1 NC_005296.1 TetR family transcriptional regulator 2600813 2688857 RPA2294 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_947639.1 2600118 D 258594 CDS NP_947640.1 39935364 2688961 2601286..2601942 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2601942 2688961 RPA2295 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947640.1 2601286 D 258594 CDS NP_947641.1 39935365 2689054 2601939..2602415 1 NC_005296.1 hypothetical protein 2602415 2689054 RPA2296 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947641.1 2601939 D 258594 CDS NP_947642.1 39935366 2688910 2602665..2605472 1 NC_005296.1 structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellin 2605472 2688910 RPA2297 Rhodopseudomonas palustris CGA009 flagellin NP_947642.1 2602665 D 258594 CDS NP_947643.1 39935367 2691554 2605541..2606095 1 NC_005296.1 hypothetical protein 2606095 2691554 RPA2298 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947643.1 2605541 D 258594 CDS NP_947644.1 39935368 2691459 2606224..2606970 1 NC_005296.1 LuxR family transcriptional regulator 2606970 2691459 RPA2299 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_947644.1 2606224 D 258594 CDS NP_947645.1 39935369 2691617 2607195..2607848 1 NC_005296.1 LuxR family transcriptional regulator 2607848 2691617 RPA2300 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_947645.1 2607195 D 258594 CDS NP_947646.1 39935370 2691639 complement(2607873..2608865) 1 NC_005296.1 AraC family transcriptional regulator 2608865 2691639 RPA2301 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_947646.1 2607873 R 258594 CDS NP_947647.1 39935371 2691074 2609019..2610710 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA synthetase 2610710 2691074 RPA2302 Rhodopseudomonas palustris CGA009 acyl-CoA synthetase NP_947647.1 2609019 D 258594 CDS NP_947648.1 39935372 2691102 2610729..2611496 1 NC_005296.1 3-hydroxyacyl-CoA dehydrogenase 2611496 2691102 RPA2303 Rhodopseudomonas palustris CGA009 3-hydroxyacyl-CoA dehydrogenase NP_947648.1 2610729 D 258594 CDS NP_947649.1 39935373 2691462 2611555..2612742 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA thiolase 2612742 2691462 RPA2304 Rhodopseudomonas palustris CGA009 acyl-CoA thiolase NP_947649.1 2611555 D 258594 CDS NP_947650.1 39935374 2691502 2612750..2613877 1 NC_005296.1 acyl-CoA dehydrogenase 2613877 2691502 RPA2305 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_947650.1 2612750 D 258594 CDS NP_947651.1 39935375 2691552 2614239..2614787 1 NC_005296.1 nickel-dependent hydrogenase b-type cytochrome subunit 2614787 2691552 RPA2306 Rhodopseudomonas palustris CGA009 nickel-dependent hydrogenase b-type cytochrome subunit NP_947651.1 2614239 D 258594 CDS NP_947652.1 39935376 2691411 complement(2614856..2617183) 1 NC_005296.1 tonB-dependent receptor 2617183 2691411 RPA2307 Rhodopseudomonas palustris CGA009 tonB-dependent receptor NP_947652.1 2614856 R 258594 CDS NP_947653.1 39935377 2691181 2617418..2618596 1 NC_005296.1 ABC transporter periplasmic iron siderophore binding protein 2618596 2691181 RPA2308 Rhodopseudomonas palustris CGA009 ABC transporter periplasmic iron siderophore binding protein NP_947653.1 2617418 D 258594 CDS NP_947654.1 39935378 2691153 2618593..2619684 1 NC_005296.1 iron chelatin ABC transporter permease subunit 2619684 2691153 RPA2309 Rhodopseudomonas palustris CGA009 iron chelatin ABC transporter permease subunit NP_947654.1 2618593 D 258594 CDS NP_947655.1 39935379 2689914 2619681..2620451 1 NC_005296.1 iron ABC transporter ATP-binding protein 2620451 2689914 RPA2310 Rhodopseudomonas palustris CGA009 iron ABC transporter ATP-binding protein NP_947655.1 2619681 D 258594 CDS NP_947656.1 39935380 2691686 complement(2620446..2621075) 1 NC_005296.1 hypothetical protein 2621075 2691686 RPA2311 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947656.1 2620446 R 258594 CDS NP_947657.1 39935381 2691393 complement(2621072..2621737) 1 NC_005296.1 hypothetical protein 2621737 2691393 RPA2312 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947657.1 2621072 R 258594 CDS NP_947658.1 39935382 2689987 complement(2621691..2622218) 1 NC_005296.1 hypothetical protein 2622218 2689987 RPA2313 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947658.1 2621691 R 258594 CDS NP_947659.1 39935383 2691741 2622816..2623256 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome c556 2623256 2691741 RPA2314 Rhodopseudomonas palustris CGA009 cytochrome c556 NP_947659.1 2622816 D 258594 CDS NP_947660.1 39935384 2691810 2623260..2623934 1 NC_005296.1 nickel-dependent hydrogenase b-type cytochrome subunit 2623934 2691810 RPA2315 Rhodopseudomonas palustris CGA009 nickel-dependent hydrogenase b-type cytochrome subunit NP_947660.1 2623260 D 258594 CDS NP_947661.1 39935385 2691762 complement(2623966..2624751) 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2624751 2691762 RPA2316 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_947661.1 2623966 R 258594 CDS NP_947662.1 39935386 2691342 complement(2624776..2625570) 1 NC_005296.1 CoA transferase small subunit B 2625570 gctB 2691342 gctB Rhodopseudomonas palustris CGA009 CoA transferase small subunit B NP_947662.1 2624776 R 258594 CDS NP_947663.1 39935387 2689551 complement(2625567..2626562) 1 NC_005296.1 glutaconate CoA transferase subunit A 2626562 gctA 2689551 gctA Rhodopseudomonas palustris CGA009 glutaconate CoA transferase subunit A NP_947663.1 2625567 R 258594 CDS NP_947664.1 39935388 2689904 complement(2626690..2627682) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2627682 2689904 RPA2319 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947664.1 2626690 R 258594 CDS NP_947665.1 39935389 2691841 complement(2627760..2629262) 1 NC_005296.1 tripartite tricarboxylate transport(TTT) family subunit TctA 2629262 2691841 RPA2320 Rhodopseudomonas palustris CGA009 tripartite tricarboxylate transport(TTT) family subunit TctA NP_947665.1 2627760 R 258594 CDS NP_947666.1 39935390 2691308 complement(2629262..2629738) 1 NC_005296.1 tripartite tricarboxylate transport(TTT) family subunit TctB 2629738 2691308 RPA2321 Rhodopseudomonas palustris CGA009 tripartite tricarboxylate transport(TTT) family subunit TctB NP_947666.1 2629262 R 258594 CDS NP_947667.1 39935391 2689723 2630453..2631346 1 NC_005296.1 LysR family transcriptional regulator 2631346 2689723 RPA2322 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_947667.1 2630453 D 258594 CDS NP_947668.1 39935392 2689562 2631514..2632788 1 NC_005296.1 4-aminobutyrate aminotransferase 2632788 goaT 2689562 goaT Rhodopseudomonas palustris CGA009 4-aminobutyrate aminotransferase NP_947668.1 2631514 D 258594 CDS NP_947669.1 39935393 2690005 2632826..2634277 1 NC_005296.1 succinate-semialdehyde dehydrogenase 2634277 gabD2 2690005 gabD2 Rhodopseudomonas palustris CGA009 succinate-semialdehyde dehydrogenase NP_947669.1 2632826 D 258594 CDS NP_947670.1 39935394 2690966 2634327..2635625 1 NC_005296.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 2635625 2690966 RPA2325 Rhodopseudomonas palustris CGA009 acetylornithine deacetylase NP_947670.1 2634327 D 258594 CDS NP_947671.1 39935395 2689841 2635625..2637214 1 NC_005296.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 2637214 2689841 RPA2326 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947671.1 2635625 D 258594 CDS NP_947672.1 39935396 2690045 2637293..2638882 1 NC_005296.1 ABC transporter oligopeptide-binding protein 2638882 2690045 RPA2327 Rhodopseudomonas palustris CGA009 ABC transporter oligopeptide-binding protein NP_947672.1 2637293 D 258594 CDS NP_947673.1 39935397 2690032 2638879..2639901 1 NC_005296.1 ABC transporter permease 2639901 2690032 RPA2328 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947673.1 2638879 D 258594 CDS NP_947674.1 39935398 2690096 2639914..2640753 1 NC_005296.1 ABC transporter permease 2640753 2690096 RPA2329 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947674.1 2639914 D 258594 CDS NP_947675.1 39935399 2690066 2640750..2642408 1 NC_005296.1 ABC transporter ATP-binding protein 2642408 2690066 RPA2330 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_947675.1 2640750 D 258594 CDS NP_947676.1 39935400 2691905 2642483..2644060 1 NC_005296.1 gamma-glutamyltranspeptidase 2644060 ggt2 2691905 ggt2 Rhodopseudomonas palustris CGA009 gamma-glutamyltranspeptidase NP_947676.1 2642483 D 258594 CDS NP_947677.1 39935401 2688852 2644354..2645508 1 NC_005296.1 nuclease 2645508 2688852 RPA2332 Rhodopseudomonas palustris CGA009 nuclease NP_947677.1 2644354 D 258594 CDS NP_947678.1 39935402 2691978 complement(2645744..2647840) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cation transport ATPase copper transporter 2647840 ctpC 2691978 ctpC Rhodopseudomonas palustris CGA009 cation transport ATPase copper transporter NP_947678.1 2645744 R 258594 CDS NP_947679.1 39935403 2691968 complement(2647837..2648175) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2648175 2691968 RPA2334 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947679.1 2647837 R 258594 CDS NP_947680.1 39935404 2691954 complement(2648168..2648509) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2648509 2691954 RPA2335 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947680.1 2648168 R 258594 CDS NP_947681.1 39935405 2692068 complement(2648496..2648819) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2648819 2692068 RPA2336 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947681.1 2648496 R 258594 CDS NP_947682.1 39935406 2691316 complement(2648837..2649169) 1 NC_005296.1 hypothetical protein 2649169 2691316 RPA2337 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947682.1 2648837 R 258594 CDS NP_947683.1 39935407 2692079 complement(2649177..2649677) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2649677 2692079 RPA2338 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947683.1 2649177 R 258594 CDS NP_947684.1 39935408 2689133 2650175..2650666 1 NC_005296.1 FUR family transcriptional regulator 2650666 2689133 RPA2339 Rhodopseudomonas palustris CGA009 FUR family transcriptional regulator NP_947684.1 2650175 D 258594 CDS NP_947685.1 39935409 2692159 complement(2650793..2652166) 1 NC_005296.1 hypothetical protein 2652166 2692159 RPA2340 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947685.1 2650793 R 258594 CDS NP_947686.1 39935410 2692141 complement(2652218..2653897) 1 NC_005296.1 dihydroxy-acid dehydratase 2653897 ilvD 2692141 ilvD Rhodopseudomonas palustris CGA009 dihydroxy-acid dehydratase NP_947686.1 2652218 R 258594 CDS NP_947687.1 39935411 2691002 complement(2653962..2655269) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; transmembrane transport protein 2655269 2691002 RPA2342 Rhodopseudomonas palustris CGA009 transmembrane transport protein NP_947687.1 2653962 R 258594 CDS NP_947688.1 39935412 2692224 2655678..2656355 1 NC_005296.1 GntR family transcriptional regulator 2656355 2692224 RPA2343 Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_947688.1 2655678 D 258594 CDS NP_947689.1 39935413 2692214 complement(2656394..2657014) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2657014 2692214 RPA2344 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947689.1 2656394 R 258594 CDS NP_947690.1 39935414 2692193 complement(2657015..2658025) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2658025 2692193 RPA2345 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947690.1 2657015 R 258594 CDS NP_947691.1 39935415 2692322 complement(2658270..2659448) 1 NC_005296.1 hypothetical protein 2659448 2692322 RPA2346 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947691.1 2658270 R 258594 CDS NP_947692.1 39935416 2690229 complement(2659490..2660881) 1 NC_005296.1 vanadium nitrogenase associated protein N 2660881 2690229 RPA2347 Rhodopseudomonas palustris CGA009 vanadium nitrogenase associated protein N NP_947692.1 2659490 R 258594 CDS NP_947693.1 39935417 2692289 complement(2660881..2662416) 1 NC_005296.1 nitrogenase molybdenum-iron protein subunit alpha 2662416 2692289 RPA2348 Rhodopseudomonas palustris CGA009 nitrogenase molybdenum-iron protein subunit alpha NP_947693.1 2660881 R 258594 CDS NP_947694.1 39935418 2690205 complement(2662641..2663834) 1 NC_005296.1 homocysteine synthase 2663834 metY 2690205 metY Rhodopseudomonas palustris CGA009 homocysteine synthase NP_947694.1 2662641 R 258594 CDS NP_947695.1 39935419 2692364 2664108..2665409 1 NC_005296.1 O-acetylhomoserine sulfhydrylase 2665409 metC 2692364 metC Rhodopseudomonas palustris CGA009 O-acetylhomoserine sulfhydrylase NP_947695.1 2664108 D 258594 CDS NP_947696.1 39935420 2690314 complement(2665574..2666062) 1 NC_005296.1 AsnC family transcriptional regulator 2666062 2690314 RPA2351 Rhodopseudomonas palustris CGA009 AsnC family transcriptional regulator NP_947696.1 2665574 R 258594 CDS NP_947697.1 39935421 2692336 complement(2666343..2666840) 1 NC_005296.1 hypothetical protein 2666840 2692336 RPA2352 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947697.1 2666343 R 258594 CDS NP_947698.1 39935422 2689079 complement(2666883..2667758) 1 NC_005296.1 nitrogenase NifH subunit 2667758 nifH1 2689079 nifH1 Rhodopseudomonas palustris CGA009 nitrogenase NifH subunit NP_947698.1 2666883 R 258594 CDS NP_947699.1 39935423 2692394 complement(2667804..2668727) 1 NC_005296.1 nitrogenase iron-molybdenum cofactor biosynthesis protein NifB 2668727 nifB2 2692394 nifB2 Rhodopseudomonas palustris CGA009 nitrogenase iron-molybdenum cofactor biosynthesis protein NifB NP_947699.1 2667804 R 258594 CDS NP_947700.1 39935424 2692391 complement(2668724..2669107) 1 NC_005296.1 nitrogenase NifB 2669107 2692391 RPA2355 Rhodopseudomonas palustris CGA009 nitrogenase NifB NP_947700.1 2668724 R 258594 CDS NP_947701.1 39935425 2690364 2669577..2670974 1 NC_005296.1 cystathionine beta-synthase 2670974 2690364 RPA2356 Rhodopseudomonas palustris CGA009 cystathionine beta-synthase NP_947701.1 2669577 D 258594 CDS NP_947702.1 39935426 2690391 2670976..2672148 1 NC_005296.1 cystathionine gamma-lyase 2672148 2690391 RPA2357 Rhodopseudomonas palustris CGA009 cystathionine gamma-lyase NP_947702.1 2670976 D 258594 CDS NP_947703.1 39935427 2692442 complement(2672250..2673296) 1 NC_005296.1 2OG-Fe(II) oxygenase 2673296 2692442 RPA2358 Rhodopseudomonas palustris CGA009 2OG-Fe(II) oxygenase NP_947703.1 2672250 R 258594 CDS NP_947704.1 39935428 2692541 2673702..2674571 1 NC_005296.1 hypothetical protein 2674571 2692541 RPA2359 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947704.1 2673702 D 258594 CDS NP_947705.1 39935429 2692504 2674580..2675713 1 NC_005296.1 ABC transporter ATP-binding protein 2675713 2692504 RPA2360 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_947705.1 2674580 D 258594 CDS NP_947706.1 39935430 2690409 2675667..2676368 1 NC_005296.1 ABC transporter permease 2676368 2690409 RPA2361 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947706.1 2675667 D 258594 CDS NP_947707.1 39935431 2692546 2676404..2677717 1 NC_005296.1 O-acetylhomoserine sulfhydrylase 2677717 2692546 RPA2362 Rhodopseudomonas palustris CGA009 O-acetylhomoserine sulfhydrylase NP_947707.1 2676404 D 258594 CDS NP_947708.1 39935432 2690470 2677746..2679251 1 NC_005296.1 nitrogenase molybdenum-iron protein subunit alpha 2679251 NifD1 2690470 NifD1 Rhodopseudomonas palustris CGA009 nitrogenase molybdenum-iron protein subunit alpha NP_947708.1 2677746 D 258594 CDS NP_947709.1 39935433 2690440 2679264..2680643 1 NC_005296.1 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE-like protein 2680643 2690440 RPA2364 Rhodopseudomonas palustris CGA009 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE-like protein NP_947709.1 2679264 D 258594 CDS NP_947710.1 39935434 2692635 complement(2680655..2681755) 1 NC_005296.1 L-allo-threonine aldolase 2681755 2692635 RPA2365 Rhodopseudomonas palustris CGA009 L-allo-threonine aldolase NP_947710.1 2680655 R 258594 CDS NP_947711.1 39935435 2692626 2682058..2682309 1 NC_005296.1 hypothetical protein 2682309 2692626 RPA2366 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947711.1 2682058 D 258594 CDS NP_947712.1 39935436 2692581 complement(2682429..2683532) 1 NC_005296.1 two component sensor histidine kinase AdeS 2683532 2692581 RPA2367 Rhodopseudomonas palustris CGA009 two component sensor histidine kinase AdeS NP_947712.1 2682429 R 258594 CDS NP_947713.1 39935437 2689060 complement(2683529..2683762) 1 NC_005296.1 hypothetical protein 2683762 2689060 RPA2368 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947713.1 2683529 R 258594 CDS NP_947714.1 39935438 2689050 complement(2683800..2684213) 1 NC_005296.1 hypothetical protein 2684213 2689050 RPA2369 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947714.1 2683800 R 258594 CDS NP_947715.1 39935439 2688889 complement(2684210..2684467) 1 NC_005296.1 hypothetical protein 2684467 2688889 RPA2369a Rhodopseudomonas palustris CGA009 hypothetical protein NP_947715.1 2684210 R 258594 CDS NP_947716.1 39935440 2688920 complement(2684472..2684612) 1 NC_005296.1 hypothetical protein 2684612 2688920 RPA2370 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947716.1 2684472 R 258594 CDS NP_947717.1 39935441 2688968 2684924..2686141 1 NC_005296.1 RND multidrug efflux membrane fusion protein MexA 2686141 mexA 2688968 mexA Rhodopseudomonas palustris CGA009 RND multidrug efflux membrane fusion protein MexA NP_947717.1 2684924 D 258594 CDS NP_947718.1 39935442 2692698 2686138..2689305 1 NC_005296.1 RND multidrug efflux transporter MexB 2689305 mexB 2692698 mexB Rhodopseudomonas palustris CGA009 RND multidrug efflux transporter MexB NP_947718.1 2686138 D 258594 CDS NP_947719.1 39935443 2690989 2689314..2690843 1 NC_005296.1 outer membrane protein 2690843 2690989 RPA2373 Rhodopseudomonas palustris CGA009 outer membrane protein NP_947719.1 2689314 D 258594 CDS NP_947720.1 39935444 2690495 2690837..2691043 1 NC_005296.1 hypothetical protein 2691043 2690495 RPA2374 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947720.1 2690837 D 258594 CDS NP_947721.1 39935445 2689776 2691216..2692823 1 NC_005296.1 hypothetical protein 2692823 2689776 RPA2375 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947721.1 2691216 D 258594 CDS NP_947722.1 39935446 2692810 complement(2693666..2693968) 1 NC_005296.1 hypothetical protein 2693968 2692810 RPA2377 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947722.1 2693666 R 258594 CDS NP_947723.1 39935447 2692781 complement(2694083..2696398) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; tonB-dependent receptor protein 2696398 2692781 RPA2378 Rhodopseudomonas palustris CGA009 tonB-dependent receptor protein NP_947723.1 2694083 R 258594 CDS NP_947724.1 39935448 2692831 complement(2696546..2697043) 1 NC_005296.1 acetyltransferase 2697043 2692831 RPA2379 Rhodopseudomonas palustris CGA009 acetyltransferase NP_947724.1 2696546 R 258594 CDS NP_947725.1 39935449 2691029 complement(2697057..2699288) 1 NC_005296.1 tonB dependent iron siderophore receptor 2699288 2691029 RPA2380 Rhodopseudomonas palustris CGA009 tonB dependent iron siderophore receptor NP_947725.1 2697057 R 258594 CDS NP_947726.1 39935450 2690531 complement(2699387..2700403) 1 NC_005296.1 iron siderophore sensor protein FecR 2700403 fecR4 2690531 fecR4 Rhodopseudomonas palustris CGA009 iron siderophore sensor protein FecR NP_947726.1 2699387 R 258594 CDS NP_947727.1 39935451 2692866 complement(2700496..2701254) 1 NC_005296.1 iron(III) ABC transporter ATP-binding protein 2701254 2692866 RPA2382 Rhodopseudomonas palustris CGA009 iron(III) ABC transporter ATP-binding protein NP_947727.1 2700496 R 258594 CDS NP_947728.1 39935452 2692838 complement(2701251..2702201) 1 NC_005296.1 iron(III) ABC transporter permease 2702201 2692838 RPA2383 Rhodopseudomonas palustris CGA009 iron(III) ABC transporter permease NP_947728.1 2701251 R 258594 CDS NP_947729.1 39935453 2692929 complement(2702194..2703171) 1 NC_005296.1 ironIII transport permease 2703171 2692929 RPA2384 Rhodopseudomonas palustris CGA009 ironIII transport permease NP_947729.1 2702194 R 258594 CDS NP_947730.1 39935454 2692982 complement(2703168..2704073) 1 NC_005296.1 ABC transporter periplasmic Fe+3 siderophore binding protein 2704073 2692982 RPA2385 Rhodopseudomonas palustris CGA009 ABC transporter periplasmic Fe+3 siderophore binding protein NP_947730.1 2703168 R 258594 CDS NP_947731.1 39935455 2692960 complement(2704064..2704981) 1 NC_005296.1 hypothetical protein 2704981 2692960 RPA2386 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947731.1 2704064 R 258594 CDS NP_947732.1 39935456 2693016 complement(2704981..2706291) 1 NC_005296.1 hypothetical protein 2706291 2693016 RPA2387 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947732.1 2704981 R 258594 CDS NP_947733.1 39935457 2693007 complement(2706288..2707556) 1 NC_005296.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2707556 2693007 RPA2388 Rhodopseudomonas palustris CGA009 acyl-CoA synthetase NP_947733.1 2706288 R 258594 CDS NP_947734.1 39935458 2690530 complement(2707553..2709241) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; rhizobactin siderophore biosynthesis protein RhsF 2709241 2690530 RPA2389 Rhodopseudomonas palustris CGA009 rhizobactin siderophore biosynthesis protein RhsF NP_947734.1 2707553 R 258594 CDS NP_947735.1 39935459 2690952 complement(2709270..2711051) 1 NC_005296.1 rhizobactin siderophore biosynthesis protein rhbC 2711051 2690952 RPA2390 Rhodopseudomonas palustris CGA009 rhizobactin siderophore biosynthesis protein rhbC NP_947735.1 2709270 R 258594 CDS NP_947736.1 39935460 2690586 2711220..2711837 1 NC_005296.1 RNA polymerase ECF-type sigma factor FecI 2711837 2690586 RPA2391 Rhodopseudomonas palustris CGA009 RNA polymerase ECF-type sigma factor FecI NP_947736.1 2711220 D 258594 CDS NP_947737.1 39935461 2693074 2713351..2714226 1 NC_005296.1 2-methylcitrate synthase 2714226 prpC 2693074 prpC Rhodopseudomonas palustris CGA009 2-methylcitrate synthase NP_947737.1 2713351 D 258594 CDS NP_947738.1 39935462 2693053 2714237..2715154 1 NC_005296.1 carboxyphosphonoenolpyruvate phosphonomutase 2715154 prpB 2693053 prpB Rhodopseudomonas palustris CGA009 carboxyphosphonoenolpyruvate phosphonomutase NP_947738.1 2714237 D 258594 CDS NP_947739.1 39935463 2690615 2715184..2715783 1 NC_005296.1 hypothetical protein 2715783 2690615 RPA2396 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947739.1 2715184 D 258594 CDS NP_947740.1 39935464 2689926 2716133..2718499 1 NC_005296.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2718499 metE 2689926 metE Rhodopseudomonas palustris CGA009 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase NP_947740.1 2716133 D 258594 CDS NP_947741.1 39935465 2690652 2719364..2721757 1 NC_005296.1 iron siderophore uptake receptor family protein 2721757 2690652 RPA2398 Rhodopseudomonas palustris CGA009 iron siderophore uptake receptor family protein NP_947741.1 2719364 D 258594 CDS NP_947742.1 39935466 2690640 2721766..2725668 1 NC_005296.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 2725668 cobN 2690640 cobN Rhodopseudomonas palustris CGA009 cobaltochelatase subunit CobN NP_947742.1 2721766 D 258594 CDS NP_947743.1 39935467 2690744 2725671..2726141 1 NC_005296.1 hypothetical protein 2726141 2690744 RPA2400 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947743.1 2725671 D 258594 CDS NP_947744.1 39935468 2690850 2726141..2726476 1 NC_005296.1 hypothetical protein 2726476 2690850 RPA2401 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947744.1 2726141 D 258594 CDS NP_947745.1 39935469 2690781 2726837..2727190 1 NC_005296.1 hypothetical protein 2727190 2690781 RPA2402 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947745.1 2726837 D 258594 CDS NP_947746.1 39935470 2688737 2727725..2728216 1 NC_005296.1 iron-chelator utilization protein 2728216 2688737 RPA2403 Rhodopseudomonas palustris CGA009 iron-chelator utilization protein NP_947746.1 2727725 D 258594 CDS NP_947747.1 39935471 2689527 2728872..2729876 1 NC_005296.1 AraC family transcriptional regulator 2729876 2689527 RPA2404 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_947747.1 2728872 D 258594 CDS NP_947748.1 39935472 2691362 2729949..2730821 1 NC_005296.1 NAD+ ADP-ribosyltransferase 2730821 draT2 2691362 draT2 Rhodopseudomonas palustris CGA009 NAD+ ADP-ribosyltransferase NP_947748.1 2729949 D 258594 CDS NP_947749.1 39935473 2689623 2730833..2731723 1 NC_005296.1 ADP-ribosyl-(dinitrogen reductase) hydrolase 2731723 draG 2689623 draG Rhodopseudomonas palustris CGA009 ADP-ribosyl-(dinitrogen reductase) hydrolase NP_947749.1 2730833 D 258594 CDS NP_947750.1 39935474 2689276 complement(2732218..2732553) 1 NC_005296.1 hypothetical protein 2732553 2689276 RPA2407 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947750.1 2732218 R 258594 CDS NP_947751.1 39935475 2689636 2732949..2734106 1 NC_005296.1 Citation: EMBO J 1999 Oct 1;18(19):5175-86; aliphatic amidase expression-regulating protein AmiC 2734106 amiC1 2689636 amiC1 Rhodopseudomonas palustris CGA009 aliphatic amidase expression-regulating protein AmiC NP_947751.1 2732949 D 258594 CDS NP_947752.1 39935476 2689360 2734103..2734768 1 NC_005296.1 Citation: EMBO J 1999 Oct 1;18(19):5175-86; AmiR antitermination protein 2734768 2689360 RPA2409 Rhodopseudomonas palustris CGA009 AmiR antitermination protein NP_947752.1 2734103 D 258594 CDS NP_947753.1 39935477 2693148 2734780..2736018 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; urea/short-chain amide transport system substrate-binding protein 2736018 2693148 RPA2410 Rhodopseudomonas palustris CGA009 urea/short-chain amide transport system substrate-binding protein NP_947753.1 2734780 D 258594 CDS NP_947754.1 39935478 2689519 2736137..2737009 1 NC_005296.1 ABC transporter permease 2737009 2689519 RPA2411 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947754.1 2736137 D 258594 CDS NP_947755.1 39935479 2689826 2737021..2738085 1 NC_005296.1 ABC transporter permease 2738085 2689826 RPA2412 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947755.1 2737021 D 258594 CDS NP_947756.1 39935480 2693147 2738085..2738807 1 NC_005296.1 urea/short-chain amide transport system ATP-binding protein 2738807 2693147 RPA2413 Rhodopseudomonas palustris CGA009 urea/short-chain amide transport system ATP-binding protein NP_947756.1 2738085 D 258594 CDS NP_947757.1 39935481 2689649 2738800..2739513 1 NC_005296.1 urea/short-chain amide transport system ATP-binding protein 2739513 2689649 RPA2414 Rhodopseudomonas palustris CGA009 urea/short-chain amide transport system ATP-binding protein NP_947757.1 2738800 D 258594 CDS NP_947758.1 39935482 2689098 2739539..2740528 1 NC_005296.1 acetamidase/formamidase 2740528 2689098 RPA2415 Rhodopseudomonas palustris CGA009 acetamidase/formamidase NP_947758.1 2739539 D 258594 CDS NP_947759.1 39935483 2691380 2740543..2742282 1 NC_005296.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2742282 2691380 RPA2416 Rhodopseudomonas palustris CGA009 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase NP_947759.1 2740543 D 258594 CDS NP_947760.1 39935484 2689096 2742298..2743059 1 NC_005296.1 3-ketoacyl-ACP reductase 2743059 2689096 RPA2417 Rhodopseudomonas palustris CGA009 3-ketoacyl-ACP reductase NP_947760.1 2742298 D 258594 CDS NP_947761.1 39935485 2688735 2745582..2747036 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane protein porin 2747036 2688735 RPA2419 Rhodopseudomonas palustris CGA009 outer membrane protein porin NP_947761.1 2745582 D 258594 CDS NP_947762.1 39935486 2690897 complement(2747337..2749574) 1 NC_005296.1 lytic transglycosylase catalytic 2749574 2690897 RPA2420 Rhodopseudomonas palustris CGA009 lytic transglycosylase catalytic NP_947762.1 2747337 R 258594 CDS NP_947763.1 39935487 2690891 2750691..2751101 1 NC_005296.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 2751101 2690891 RPA2421 Rhodopseudomonas palustris CGA009 NADH dehydrogenase NP_947763.1 2750691 D 258594 CDS NP_947764.1 39935488 2690841 complement(2751142..2751831) 1 NC_005296.1 hypothetical protein 2751831 2690841 RPA2422 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947764.1 2751142 R 258594 CDS NP_947765.1 39935489 2690800 2751955..2752893 1 NC_005296.1 AraC family transcriptional regulator 2752893 2690800 RPA2423 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_947765.1 2751955 D 258594 CDS NP_947766.1 39935490 2688819 complement(2752915..2754342) 1 NC_005296.1 agarase 2754342 2688819 RPA2424 Rhodopseudomonas palustris CGA009 agarase NP_947766.1 2752915 R 258594 CDS NP_947767.1 39935491 2688790 complement(2754356..2755300) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; lipase/esterase 2755300 2688790 RPA2425 Rhodopseudomonas palustris CGA009 lipase/esterase NP_947767.1 2754356 R 258594 CDS NP_947768.1 39935492 2690750 2755533..2756522 1 NC_005296.1 hypothetical protein 2756522 2690750 RPA2426 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947768.1 2755533 D 258594 CDS NP_947769.1 39935493 2690702 complement(2756723..2757967) 1 NC_005296.1 serine protease 2757967 2690702 RPA2427 Rhodopseudomonas palustris CGA009 serine protease NP_947769.1 2756723 R 258594 CDS NP_947770.1 39935494 2690695 complement(2758031..2758351) 1 NC_005296.1 hypothetical protein 2758351 2690695 RPA2428 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947770.1 2758031 R 258594 CDS NP_947771.1 39935495 2690664 complement(2758475..2759158) 1 NC_005296.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2759158 aat 2690664 aat Rhodopseudomonas palustris CGA009 leucyl/phenylalanyl-tRNA--protein transferase NP_947771.1 2758475 R 258594 CDS NP_947772.1 39935496 2690637 complement(2759213..2760640) 1 NC_005296.1 hypothetical protein 2760640 2690637 RPA2430 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947772.1 2759213 R 258594 CDS NP_947773.1 39935497 2690624 complement(2760673..2761344) 1 NC_005296.1 hypothetical protein 2761344 2690624 RPA2431 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947773.1 2760673 R 258594 CDS NP_947774.1 39935498 2693051 complement(2761477..2762568) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; signal transduction histidine kinase 2762568 2693051 RPA2432 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_947774.1 2761477 R 258594 CDS NP_947775.1 39935499 2693047 complement(2762565..2763008) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis protein CheY 2763008 2693047 RPA2433 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_947775.1 2762565 R 258594 CDS NP_947776.1 39935500 2689779 complement(2763005..2764537) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; multi-sensor signal transduction histidine kinase 2764537 2689779 RPA2434 Rhodopseudomonas palustris CGA009 multi-sensor signal transduction histidine kinase NP_947776.1 2763005 R 258594 CDS NP_947777.1 39935501 2690575 complement(2764725..2766077) 1 NC_005296.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 2766077 accC 2690575 accC Rhodopseudomonas palustris CGA009 acetyl-CoA carboxylase biotin carboxylase subunit NP_947777.1 2764725 R 258594 CDS NP_947778.1 39935502 2693043 complement(2766195..2766689) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acetyl-CoA carboxylase biotin carboxyl carrier protein 2766689 accB 2693043 accB Rhodopseudomonas palustris CGA009 acetyl-CoA carboxylase biotin carboxyl carrier protein NP_947778.1 2766195 R 258594 CDS NP_947779.1 39935503 2693019 complement(2766728..2767183) 1 NC_005296.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2767183 aroQ2 2693019 aroQ2 Rhodopseudomonas palustris CGA009 3-dehydroquinate dehydratase NP_947779.1 2766728 R 258594 CDS NP_947780.1 39935504 2693010 complement(2767477..2768148) 1 NC_005296.1 hypothetical protein 2768148 2693010 RPA2438 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947780.1 2767477 R 258594 CDS NP_947781.1 39935505 2690539 2768379..2768627 1 NC_005296.1 hypothetical protein 2768627 2690539 RPA2439 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947781.1 2768379 D 258594 CDS NP_947782.1 39935506 2692994 2768965..2769918 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cation efflux protein 2769918 2692994 RPA2440 Rhodopseudomonas palustris CGA009 cation efflux protein NP_947782.1 2768965 D 258594 CDS NP_947783.1 39935507 2692957 2769906..2770598 1 NC_005296.1 TetR family transcriptional regulator 2770598 2692957 RPA2441 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_947783.1 2769906 D 258594 CDS NP_947784.1 39935508 2690922 complement(2770683..2771450) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DSBA oxidoreductase 2771450 2690922 RPA2442 Rhodopseudomonas palustris CGA009 DSBA oxidoreductase NP_947784.1 2770683 R 258594 CDS NP_947785.1 39935509 2692925 complement(2771641..2772330) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; antioxidant protein 2772330 2692925 RPA2443 Rhodopseudomonas palustris CGA009 antioxidant protein NP_947785.1 2771641 R 258594 CDS NP_947786.1 39935510 2692881 complement(2772482..2772871) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2772871 2692881 RPA2444 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947786.1 2772482 R 258594 CDS NP_947787.1 39935511 2688861 complement(2773057..2774484) 1 NC_005296.1 peptidase M48 Ste24p 2774484 2688861 RPA2445 Rhodopseudomonas palustris CGA009 peptidase M48 Ste24p NP_947787.1 2773057 R 258594 CDS NP_947788.1 39935512 2692825 2774592..2775782 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; class I/II aminotransferase 2775782 2692825 RPA2446 Rhodopseudomonas palustris CGA009 class I/II aminotransferase NP_947788.1 2774592 D 258594 CDS NP_947789.1 39935513 2692803 2775881..2776498 1 NC_005296.1 biotin synthase 2776498 2692803 RPA2447 Rhodopseudomonas palustris CGA009 biotin synthase NP_947789.1 2775881 D 258594 CDS NP_947790.1 39935514 2690526 2776597..2777934 1 NC_005296.1 C4-dicarboxylic acid transport protein 2777934 dctA2 2690526 dctA2 Rhodopseudomonas palustris CGA009 C4-dicarboxylic acid transport protein NP_947790.1 2776597 D 258594 CDS NP_947791.1 39935515 2692790 complement(2778036..2779055) 1 NC_005296.1 hypothetical protein 2779055 2692790 RPA2449 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947791.1 2778036 R 258594 CDS NP_947792.1 39935516 2692789 complement(2779169..2782324) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ribonuclease Rne/Rng family 2782324 rne 2692789 rne Rhodopseudomonas palustris CGA009 ribonuclease Rne/Rng family NP_947792.1 2779169 R 258594 CDS NP_947793.1 39935517 2692773 2782905..2784335 1 NC_005296.1 N-acetylmuramoyl-L-alanine amidase 2784335 2692773 RPA2451 Rhodopseudomonas palustris CGA009 N-acetylmuramoyl-L-alanine amidase NP_947793.1 2782905 D 258594 CDS NP_947794.1 39935518 2689851 2784555..2787053 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; penicillin-binding protein 1A 2787053 2689851 RPA2452 Rhodopseudomonas palustris CGA009 penicillin-binding protein 1A NP_947794.1 2784555 D 258594 CDS NP_947795.1 39935519 2690494 2787334..2788302 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptide chain release factor 2 2788302 prfB 2690494 prfB Rhodopseudomonas palustris CGA009 peptide chain release factor 2 NP_947795.1 2787334 D 258594 CDS NP_947796.1 39935520 2690479 2788309..2789202 1 NC_005296.1 dehydrogenase 2789202 2690479 RPA2454 Rhodopseudomonas palustris CGA009 dehydrogenase NP_947796.1 2788309 D 258594 CDS NP_947797.1 39935521 2692729 complement(2789329..2790699) 1 NC_005296.1 peptidase M23B 2790699 2692729 RPA2455 Rhodopseudomonas palustris CGA009 peptidase M23B NP_947797.1 2789329 R 258594 CDS NP_947798.1 39935522 2692692 complement(2790796..2791485) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; bacterioferritin co-migratory protein 2791485 2692692 RPA2456 Rhodopseudomonas palustris CGA009 bacterioferritin co-migratory protein NP_947798.1 2790796 R 258594 CDS NP_947799.1 39935523 2688873 2791680..2795402 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2795402 2688873 RPA2457 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947799.1 2791680 D 258594 CDS NP_947800.1 39935524 2688930 complement(2795551..2796111) 1 NC_005296.1 cytochrome B561 2796111 2688930 RPA2458 Rhodopseudomonas palustris CGA009 cytochrome B561 NP_947800.1 2795551 R 258594 CDS NP_947801.1 39935525 2688969 complement(2796332..2797549) 1 NC_005296.1 permease 2797549 2688969 RPA2459 Rhodopseudomonas palustris CGA009 permease NP_947801.1 2796332 R 258594 CDS NP_947802.1 39935526 2689036 complement(2797634..2798890) 1 NC_005296.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2798890 tyrS 2689036 tyrS Rhodopseudomonas palustris CGA009 tyrosyl-tRNA synthetase NP_947802.1 2797634 R 258594 CDS NP_947803.1 39935527 2689018 2799048..2800151 1 NC_005296.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2800151 anmK 2689018 anmK Rhodopseudomonas palustris CGA009 anhydro-N-acetylmuramic acid kinase NP_947803.1 2799048 D 258594 CDS NP_947804.1 39935528 2692647 complement(2800206..2800853) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2800853 2692647 RPA2462 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947804.1 2800206 R 258594 CDS NP_947805.1 39935529 2692621 2801091..2802263 1 NC_005296.1 class V aminotransferase 2802263 nifS1 2692621 nifS1 Rhodopseudomonas palustris CGA009 class V aminotransferase NP_947805.1 2801091 D 258594 CDS NP_947806.1 39935530 2692601 2802346..2803827 1 NC_005296.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase 2803827 sufB 2692601 sufB Rhodopseudomonas palustris CGA009 cysteine desulfurase NP_947806.1 2802346 D 258594 CDS NP_947807.1 39935531 2692595 2803960..2804718 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FeS assembly ATPase SufC 2804718 sufC 2692595 sufC Rhodopseudomonas palustris CGA009 FeS assembly ATPase SufC NP_947807.1 2803960 D 258594 CDS NP_947808.1 39935532 2692562 2804742..2806055 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FeS assembly protein SufD 2806055 sufD 2692562 sufD Rhodopseudomonas palustris CGA009 FeS assembly protein SufD NP_947808.1 2804742 D 258594 CDS NP_947809.1 39935533 2690474 2806052..2807299 1 NC_005296.1 cysteine desulfurase 2807299 sufS 2690474 sufS Rhodopseudomonas palustris CGA009 cysteine desulfurase NP_947809.1 2806052 D 258594 CDS NP_947810.1 39935534 2690446 2807296..2807664 1 NC_005296.1 hypothetical protein 2807664 2690446 RPA2468 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947810.1 2807296 D 258594 CDS NP_947811.1 39935535 2690425 2807693..2808088 1 NC_005296.1 lactoylglutathione lyase 2808088 2690425 RPA2469 Rhodopseudomonas palustris CGA009 lactoylglutathione lyase NP_947811.1 2807693 D 258594 CDS NP_947812.1 39935536 2692516 2808218..2808589 1 NC_005296.1 hypothetical protein 2808589 2692516 RPA2470 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947812.1 2808218 D 258594 CDS NP_947813.1 39935537 2690419 2808744..2810708 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2810708 2690419 RPA2471 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947813.1 2808744 D 258594 CDS NP_947814.1 39935538 2690399 2810714..2811814 1 NC_005296.1 hypothetical protein 2811814 2690399 RPA2472 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947814.1 2810714 D 258594 CDS NP_947815.1 39935539 2692484 2811811..2812284 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; translation initiation inhibitor 2812284 2692484 RPA2473 Rhodopseudomonas palustris CGA009 translation initiation inhibitor NP_947815.1 2811811 D 258594 CDS NP_947816.1 39935540 2690367 2812370..2814040 1 NC_005296.1 o-linked GlcNAc transferase 2814040 2690367 RPA2474 Rhodopseudomonas palustris CGA009 o-linked GlcNAc transferase NP_947816.1 2812370 D 258594 CDS NP_947817.1 39935541 2692466 2814065..2814661 1 NC_005296.1 TfoX N-terminal 2814661 2692466 RPA2475 Rhodopseudomonas palustris CGA009 TfoX N-terminal NP_947817.1 2814065 D 258594 CDS NP_947818.1 39935542 2692454 complement(2814670..2815737) 1 NC_005296.1 diguanylate cyclase 2815737 2692454 RPA2476 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_947818.1 2814670 R 258594 CDS NP_947819.1 39935543 2692431 complement(2815836..2817254) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ATP-dependent RNA helicase 2817254 2692431 RPA2477 Rhodopseudomonas palustris CGA009 ATP-dependent RNA helicase NP_947819.1 2815836 R 258594 CDS NP_947820.1 39935544 2692417 complement(2817528..2818619) 1 NC_005296.1 AraC family transcriptional regulator 2818619 2692417 RPA2478 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_947820.1 2817528 R 258594 CDS NP_947821.1 39935545 2692380 2818822..2820561 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 2820561 2692380 RPA2479 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_947821.1 2818822 D 258594 CDS NP_947822.1 39935546 2690348 2820739..2822244 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2822244 2690348 RPA2480 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947822.1 2820739 D 258594 CDS NP_947823.1 39935547 2690295 complement(2822299..2823135) 1 NC_005296.1 XRE family transcriptional regulator 2823135 2690295 RPA2481 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_947823.1 2822299 R 258594 CDS NP_947824.1 39935548 2690293 2823234..2824139 1 NC_005296.1 epimerase 2824139 2690293 RPA2482 Rhodopseudomonas palustris CGA009 epimerase NP_947824.1 2823234 D 258594 CDS NP_947825.1 39935549 2692334 complement(2824175..2824552) 1 NC_005296.1 hypothetical protein 2824552 2692334 RPA2483 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947825.1 2824175 R 258594 CDS NP_947826.1 39935550 2692300 complement(2824583..2825053) 1 NC_005296.1 hypothetical protein 2825053 2692300 RPA2484 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947826.1 2824583 R 258594 CDS NP_947827.1 39935551 2692297 2825375..2826097 1 NC_005296.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 2826097 aqpZ 2692297 aqpZ Rhodopseudomonas palustris CGA009 aquaporin Z NP_947827.1 2825375 D 258594 CDS NP_947828.1 39935552 2690231 complement(2826143..2828194) 1 NC_005296.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2828194 parE 2690231 parE Rhodopseudomonas palustris CGA009 DNA topoisomerase IV subunit B NP_947828.1 2826143 R 258594 CDS NP_947829.1 39935553 2690238 2828652..2829182 1 NC_005296.1 DedA family membrane protein 2829182 2690238 RPA2487 Rhodopseudomonas palustris CGA009 DedA family membrane protein NP_947829.1 2828652 D 258594 CDS NP_947830.1 39935554 2692275 2829268..2830257 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2830257 2692275 RPA2488 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947830.1 2829268 D 258594 CDS NP_947831.1 39935555 2692268 complement(2830404..2830949) 1 NC_005296.1 hypothetical protein 2830949 2692268 RPA2489 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947831.1 2830404 R 258594 CDS NP_947832.1 39935556 2690215 2831398..2832063 1 NC_005296.1 Citation: Honjo et al. (1990) J. Bact. 172:1783-1790.; hypothetical protein 2832063 2690215 RPA2490 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947832.1 2831398 D 258594 CDS NP_947833.1 39935557 2692270 2832078..2833073 1 NC_005296.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 2833073 argC 2692270 argC Rhodopseudomonas palustris CGA009 N-acetyl-gamma-glutamyl-phosphate reductase NP_947833.1 2832078 D 258594 CDS NP_947834.1 39935558 2692246 2833129..2833740 1 NC_005296.1 hypothetical protein 2833740 2692246 RPA2492 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947834.1 2833129 D 258594 CDS NP_947835.1 39935559 2692216 2833995..2835791 1 NC_005296.1 P-methylase 2835791 2692216 RPA2493 Rhodopseudomonas palustris CGA009 P-methylase NP_947835.1 2833995 D 258594 CDS NP_947836.1 39935560 2692198 2836026..2836388 1 NC_005296.1 hypothetical protein 2836388 2692198 RPA2494 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947836.1 2836026 D 258594 CDS NP_947837.1 39935561 2692167 complement(2836393..2836791) 1 NC_005296.1 translation initiation inhibitor 2836791 2692167 RPA2495 Rhodopseudomonas palustris CGA009 translation initiation inhibitor NP_947837.1 2836393 R 258594 CDS NP_947838.1 39935562 2692153 complement(2837138..2837836) 1 NC_005296.1 GntR family transcriptional regulator 2837836 2692153 RPA2496 Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_947838.1 2837138 R 258594 CDS NP_947839.1 39935563 2691505 2838147..2838935 1 NC_005296.1 anion ABC transporter ATP-binding protein 2838935 2691505 RPA2497 Rhodopseudomonas palustris CGA009 anion ABC transporter ATP-binding protein NP_947839.1 2838147 D 258594 CDS NP_947840.1 39935564 2692102 2838935..2839813 1 NC_005296.1 ABC transporter permease 2839813 2692102 RPA2498 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947840.1 2838935 D 258594 CDS NP_947841.1 39935565 2690184 2839879..2840856 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter periplasmic protein 2840856 2690184 RPA2499 Rhodopseudomonas palustris CGA009 ABC transporter periplasmic protein NP_947841.1 2839879 D 258594 CDS NP_947842.1 39935566 2692033 2840927..2842204 1 NC_005296.1 amidase 2842204 2692033 RPA2500 Rhodopseudomonas palustris CGA009 amidase NP_947842.1 2840927 D 258594 CDS NP_947843.1 39935567 2692026 complement(2842246..2844051) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; poly(R)-hydroxyalkanoic acid synthase 2844051 phbC 2692026 phbC Rhodopseudomonas palustris CGA009 poly(R)-hydroxyalkanoic acid synthase NP_947843.1 2842246 R 258594 CDS NP_947844.1 39935568 2692011 2844378..2844683 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2844683 2692011 RPA2502 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947844.1 2844378 D 258594 CDS NP_947845.1 39935569 2691339 2844868..2846088 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; aminotransferase 2846088 2691339 RPA2503 Rhodopseudomonas palustris CGA009 aminotransferase NP_947845.1 2844868 D 258594 CDS NP_947846.1 39935570 2691975 2846167..2847492 1 NC_005296.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2847492 HDH 2691975 HDH Rhodopseudomonas palustris CGA009 homoserine dehydrogenase NP_947846.1 2846167 D 258594 CDS NP_947847.1 39935571 2689161 2847555..2848559 1 NC_005296.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2848559 glpX 2689161 glpX Rhodopseudomonas palustris CGA009 fructose 1,6-bisphosphatase II NP_947847.1 2847555 D 258594 CDS NP_947848.1 39935572 2690165 2848668..2849111 1 NC_005296.1 acetyltransferase 2849111 2690165 RPA2506 Rhodopseudomonas palustris CGA009 acetyltransferase NP_947848.1 2848668 D 258594 CDS NP_947849.1 39935573 2691942 2849176..2849901 1 NC_005296.1 haloacid dehalogenase 2849901 2691942 RPA2507 Rhodopseudomonas palustris CGA009 haloacid dehalogenase NP_947849.1 2849176 D 258594 CDS NP_947850.1 39935574 2691918 2849930..2851867 1 NC_005296.1 single-stranded-DNA-specific exonuclease RecJ 2851867 recJ 2691918 recJ Rhodopseudomonas palustris CGA009 single-stranded-DNA-specific exonuclease RecJ NP_947850.1 2849930 D 258594 CDS NP_947851.1 39935575 2691914 complement(2852031..2852321) 1 NC_005296.1 hypothetical protein 2852321 2691914 RPA2509 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947851.1 2852031 R 258594 CDS NP_947852.1 39935576 2691893 complement(2852406..2853524) 1 NC_005296.1 hypothetical protein 2853524 2691893 RPA2510 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947852.1 2852406 R 258594 CDS NP_947853.1 39935577 2689164 complement(2853542..2854771) 1 NC_005296.1 lytic murein transglycosylase 2854771 2689164 RPA2511 Rhodopseudomonas palustris CGA009 lytic murein transglycosylase NP_947853.1 2853542 R 258594 CDS NP_947854.1 39935578 2690102 2854994..2855974 1 NC_005296.1 similar to YegS from E. coli; lipid kinase 2855974 2690102 RPA2512 Rhodopseudomonas palustris CGA009 lipid kinase NP_947854.1 2854994 D 258594 CDS NP_947855.1 39935579 2690077 complement(2856053..2856619) 1 NC_005296.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2856619 efp 2690077 efp Rhodopseudomonas palustris CGA009 elongation factor P NP_947855.1 2856053 R 258594 CDS NP_947856.1 39935580 2690050 2856757..2857812 1 NC_005296.1 lysyl-tRNA synthetase 2857812 2690050 RPA2514 Rhodopseudomonas palustris CGA009 lysyl-tRNA synthetase NP_947856.1 2856757 D 258594 CDS NP_947857.1 39935581 2691872 2857809..2858900 1 NC_005296.1 Citation: Ruzicka et al. (2000) J. Bact. 182:469-476; hypothetical protein 2858900 kamA 2691872 kamA Rhodopseudomonas palustris CGA009 hypothetical protein NP_947857.1 2857809 D 258594 CDS NP_947858.1 39935582 2690034 2859061..2859321 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2859321 2690034 RPA2516 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947858.1 2859061 D 258594 CDS NP_947859.1 39935583 2690010 complement(2859349..2859939) 1 NC_005296.1 hypothetical protein 2859939 2690010 RPA2517 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947859.1 2859349 R 258594 CDS NP_947860.1 39935584 2689742 2860251..2860388 1 NC_005296.1 hypothetical protein 2860388 2689742 RPA2518 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947860.1 2860251 D 258594 CDS NP_947861.1 39935585 2689850 2860446..2860673 1 NC_005296.1 hypothetical protein 2860673 2689850 RPA2519 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947861.1 2860446 D 258594 CDS NP_947862.1 39935586 2689721 complement(2861230..2861799) 1 NC_005296.1 hypothetical protein 2861799 2689721 RPA2520 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947862.1 2861230 R 258594 CDS NP_947863.1 39935587 2691280 2862192..2862401 1 NC_005296.1 hypothetical protein 2862401 2691280 RPA2521 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947863.1 2862192 D 258594 CDS NP_947864.1 39935588 2691348 2862889..2863146 1 NC_005296.1 hypothetical protein 2863146 2691348 RPA2522 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947864.1 2862889 D 258594 CDS NP_947865.1 39935589 2691830 complement(2863487..2863936) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glyoxalase/bleomycin resistance protein/dioxygenase 2863936 2691830 RPA2523 Rhodopseudomonas palustris CGA009 glyoxalase/bleomycin resistance protein/dioxygenase NP_947865.1 2863487 R 258594 CDS NP_947866.1 39935590 2691803 2864429..2865190 1 NC_005296.1 Sir2 family ADP ribosyltransferase 2865190 2691803 RPA2524 Rhodopseudomonas palustris CGA009 Sir2 family ADP ribosyltransferase NP_947866.1 2864429 D 258594 CDS NP_947867.1 39935591 2691792 2865394..2866101 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cold-shock DNA-binding domain-containing protein 2866101 cspA2 2691792 cspA2 Rhodopseudomonas palustris CGA009 cold-shock DNA-binding domain-containing protein NP_947867.1 2865394 D 258594 CDS NP_947868.1 39935592 2691757 2866285..2866770 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2866770 2691757 RPA2526 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947868.1 2866285 D 258594 CDS NP_947869.1 39935593 2691734 complement(2867308..2868930) 1 NC_005296.1 DNA-dependent RNA polymerase 2868930 2691734 RPA2527 Rhodopseudomonas palustris CGA009 DNA-dependent RNA polymerase NP_947869.1 2867308 R 258594 CDS NP_947870.1 39935594 2691402 2869057..2869569 1 NC_005296.1 hypothetical protein 2869569 2691402 RPA2528 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947870.1 2869057 D 258594 CDS NP_947871.1 39935595 2689783 2869607..2869996 1 NC_005296.1 hypothetical protein 2869996 2689783 RPA2529 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947871.1 2869607 D 258594 CDS NP_947872.1 39935596 2691725 2870046..2870819 1 NC_005296.1 hypothetical protein 2870819 2691725 RPA2530 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947872.1 2870046 D 258594 CDS NP_947873.1 39935597 2691687 2870915..2871193 1 NC_005296.1 hypothetical protein 2871193 2691687 RPA2531 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947873.1 2870915 D 258594 CDS NP_947874.1 39935598 2691249 2871455..2872216 1 NC_005296.1 hypothetical protein 2872216 2691249 RPA2532 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947874.1 2871455 D 258594 CDS NP_947875.1 39935599 2691220 2872381..2872800 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2872800 2691220 RPA2533 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947875.1 2872381 D 258594 CDS NP_947876.1 39935600 2691193 2872797..2873579 1 NC_005296.1 hypothetical protein 2873579 2691193 RPA2534 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947876.1 2872797 D 258594 CDS NP_947877.1 39935601 2691191 2874172..2875290 1 NC_005296.1 UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase 2875290 waaG 2691191 waaG Rhodopseudomonas palustris CGA009 UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase NP_947877.1 2874172 D 258594 CDS NP_947878.1 39935602 2691174 complement(2875224..2876498) 1 NC_005296.1 OpgC protein 2876498 2691174 RPA2536 Rhodopseudomonas palustris CGA009 OpgC protein NP_947878.1 2875224 R 258594 CDS NP_947879.1 39935603 2691150 2876741..2877046 1 NC_005296.1 ETC complex I subunit region 2877046 2691150 RPA2537 Rhodopseudomonas palustris CGA009 ETC complex I subunit region NP_947879.1 2876741 D 258594 CDS NP_947880.1 39935604 2691440 2877195..2878850 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA carboxylase subunit beta 2878850 2691440 RPA2538 Rhodopseudomonas palustris CGA009 acyl-CoA carboxylase subunit beta NP_947880.1 2877195 D 258594 CDS NP_947881.1 39935605 2691445 2878864..2880879 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA carboxylase biotin-carrying subunit 2880879 2691445 RPA2539 Rhodopseudomonas palustris CGA009 acyl-CoA carboxylase biotin-carrying subunit NP_947881.1 2878864 D 258594 CDS NP_947882.1 39935606 2691464 2881000..2881905 1 NC_005296.1 Citation: Baltscheffsky et al. (1997) Biochim. Biophys. Acta 1337:113-122; pyruvate carboxyltransferase 2881905 hmgL 2691464 hmgL Rhodopseudomonas palustris CGA009 pyruvate carboxyltransferase NP_947882.1 2881000 D 258594 CDS NP_947883.1 39935607 2691504 complement(2882000..2883358) 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctM 2883358 2691504 RPA2541 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctM NP_947883.1 2882000 R 258594 CDS NP_947884.1 39935608 2691543 complement(2883355..2883906) 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctQ 2883906 2691543 RPA2542 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctQ NP_947884.1 2883355 R 258594 CDS NP_947885.1 39935609 2691592 complement(2883903..2884922) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TRAP dicarboxylate family transporter subunit DctP 2884922 2691592 RPA2543 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctP NP_947885.1 2883903 R 258594 CDS NP_947886.1 39935610 2691604 2885193..2885432 1 NC_005296.1 hypothetical protein 2885432 2691604 RPA2544 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947886.1 2885193 D 258594 CDS NP_947887.1 39935611 2691092 2885963..2888956 1 NC_005296.1 outer membrane protein 2888956 2691092 RPA2545 Rhodopseudomonas palustris CGA009 outer membrane protein NP_947887.1 2885963 D 258594 CDS NP_947888.1 39935612 2691078 2889133..2889591 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidylprolyl isomerase 2889591 2691078 RPA2546 Rhodopseudomonas palustris CGA009 peptidylprolyl isomerase NP_947888.1 2889133 D 258594 CDS NP_947889.1 39935613 2691401 complement(2889640..2889981) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2889981 2691401 RPA2547 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947889.1 2889640 R 258594 CDS NP_947890.1 39935614 2689128 2890202..2891008 1 NC_005296.1 hypothetical protein 2891008 2689128 RPA2548 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947890.1 2890202 D 258594 CDS NP_947891.1 39935615 2691467 2891005..2891484 1 NC_005296.1 hypothetical protein 2891484 2691467 RPA2549 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947891.1 2891005 D 258594 CDS NP_947892.1 39935616 2691593 complement(2891485..2892042) 1 NC_005296.1 hypothetical protein 2892042 2691593 RPA2550 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947892.1 2891485 R 258594 CDS NP_947893.1 39935617 2691555 2892078..2892521 1 NC_005296.1 hypothetical protein 2892521 2691555 RPA2551 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947893.1 2892078 D 258594 CDS NP_947894.1 39935618 2691105 complement(2893377..2893697) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2893697 2691105 RPA2552 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947894.1 2893377 R 258594 CDS NP_947895.1 39935619 2691189 2894171..2899384 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2899384 2691189 RPA2553 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947895.1 2894171 D 258594 CDS NP_947896.1 39935620 2691192 2899381..2901576 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; penicillin-binding protein 1C 2901576 2691192 RPA2554 Rhodopseudomonas palustris CGA009 penicillin-binding protein 1C NP_947896.1 2899381 D 258594 CDS NP_947897.1 39935621 2691253 2901627..2903372 1 NC_005296.1 glycosyl transferase family protein 2903372 2691253 RPA2555 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_947897.1 2901627 D 258594 CDS NP_947898.1 39935622 2691689 2903374..2904222 1 NC_005296.1 PA-phosphatase-like phosphoesterase 2904222 2691689 RPA2556 Rhodopseudomonas palustris CGA009 PA-phosphatase-like phosphoesterase NP_947898.1 2903374 D 258594 CDS NP_947899.1 39935623 2689833 2904286..2905038 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glycosyl transferase family protein 2905038 2689833 RPA2557 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_947899.1 2904286 D 258594 CDS NP_947900.1 39935624 2689952 2905038..2905376 1 NC_005296.1 hypothetical protein 2905376 2689952 RPA2558 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947900.1 2905038 D 258594 CDS NP_947901.1 39935625 2689366 complement(2905539..2906735) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cystathionine beta-lyase 2906735 metC 2689366 metC Rhodopseudomonas palustris CGA009 cystathionine beta-lyase NP_947901.1 2905539 R 258594 CDS NP_947902.1 39935626 2691758 2907057..2908073 1 NC_005296.1 observed by proteomics; Citation: Walshaw and Poole (1996) Mol. Microbiol. 21:1239-52; ABC transporter periplasmic amino acid binding protein aapJ-1 2908073 aapJ-1 2691758 aapJ-1 Rhodopseudomonas palustris CGA009 ABC transporter periplasmic amino acid binding protein aapJ-1 NP_947902.1 2907057 D 258594 CDS NP_947903.1 39935627 2691763 2908094..2909299 1 NC_005296.1 Citation: Walshaw and Poole (1996) Mol. Microbiol. 21:1239-52; polar amino acid ABC transport permease AapQ-1 2909299 aapQ-1 2691763 aapQ-1 Rhodopseudomonas palustris CGA009 polar amino acid ABC transport permease AapQ-1 NP_947903.1 2908094 D 258594 CDS NP_947904.1 39935628 2691787 2909296..2910801 1 NC_005296.1 Citation: Walshaw and Poole (1996) Mol. Microbiol. 21:1239-52; polar amino acid ABC transport permease AapM-1 2910801 aapM-1 2691787 aapM-1 Rhodopseudomonas palustris CGA009 polar amino acid ABC transport permease AapM-1 NP_947904.1 2909296 D 258594 CDS NP_947905.1 39935629 2691849 2910817..2911557 1 NC_005296.1 Citation: Walshaw and Poole (1996) Mol. Microbiol. 21:1239-52; observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; amino acid ABC transporter ATP-binding protein 2911557 aapP-1 2691849 aapP-1 Rhodopseudomonas palustris CGA009 amino acid ABC transporter ATP-binding protein NP_947905.1 2910817 D 258594 CDS NP_947906.1 39935630 2689954 complement(2911582..2911851) 1 NC_005296.1 hypothetical protein 2911851 2689954 RPA2564 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947906.1 2911582 R 258594 CDS NP_947907.1 39935631 2691343 complement(2911997..2912134) 1 NC_005296.1 O-acetylserine (thiol) lyase C-terminal portion 2912134 2691343 RPA2565 Rhodopseudomonas palustris CGA009 O-acetylserine (thiol) lyase C-terminal portion NP_947907.1 2911997 R 258594 CDS NP_947908.1 39935632 2691594 2912351..2913934 1 NC_005296.1 EA59 gene protein phage lambda 2913934 2691594 RPA2566 Rhodopseudomonas palustris CGA009 EA59 gene protein phage lambda NP_947908.1 2912351 D 258594 CDS NP_947909.1 39935633 2688973 2913943..2914782 1 NC_005296.1 EA31 gene protein phage lambda 2914782 2688973 RPA2567 Rhodopseudomonas palustris CGA009 EA31 gene protein phage lambda NP_947909.1 2913943 D 258594 CDS NP_947910.1 39935634 2691434 complement(2914922..2915959) 1 NC_005296.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 2915959 2691434 RPA2568 Rhodopseudomonas palustris CGA009 cysteine synthase A NP_947910.1 2914922 R 258594 CDS NP_947911.1 39935635 2689557 complement(2916070..2917299) 1 NC_005296.1 cyclopropane-fatty-acyl-phospholipid synthase 2917299 cfa1 2689557 cfa1 Rhodopseudomonas palustris CGA009 cyclopropane-fatty-acyl-phospholipid synthase NP_947911.1 2916070 R 258594 CDS NP_947912.1 39935636 2689983 complement(2917359..2918204) 1 NC_005296.1 hypothetical protein 2918204 2689983 RPA2570 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947912.1 2917359 R 258594 CDS NP_947913.1 39935637 2689733 complement(2918206..2919519) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NADPH-dependent oxidoreductase 2919519 2689733 RPA2571 Rhodopseudomonas palustris CGA009 NADPH-dependent oxidoreductase NP_947913.1 2918206 R 258594 CDS NP_947914.1 39935638 2689740 2919954..2921402 1 NC_005296.1 RND efflux system outer membrane lipoprotein NodT 2921402 2689740 RPA2572 Rhodopseudomonas palustris CGA009 RND efflux system outer membrane lipoprotein NodT NP_947914.1 2919954 D 258594 CDS NP_947915.1 39935639 2689768 2921392..2922762 1 NC_005296.1 permease 2922762 2689768 RPA2573 Rhodopseudomonas palustris CGA009 permease NP_947915.1 2921392 D 258594 CDS NP_947916.1 39935640 2690009 2922833..2925964 1 NC_005296.1 acriflavin resistance protein 2925964 2690009 RPA2574 Rhodopseudomonas palustris CGA009 acriflavin resistance protein NP_947916.1 2922833 D 258594 CDS NP_947917.1 39935641 2691862 2925964..2929071 1 NC_005296.1 acriflavin resistance protein 2929071 2691862 RPA2575 Rhodopseudomonas palustris CGA009 acriflavin resistance protein NP_947917.1 2925964 D 258594 CDS NP_947918.1 39935642 2690064 2929079..2929810 1 NC_005296.1 hypothetical protein 2929810 2690064 RPA2576 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947918.1 2929079 D 258594 CDS NP_947919.1 39935643 2690117 2930223..2931692 1 NC_005296.1 alginate o-acetyltransferase AlgI 2931692 2690117 RPA2577 Rhodopseudomonas palustris CGA009 alginate o-acetyltransferase AlgI NP_947919.1 2930223 D 258594 CDS NP_947920.1 39935644 2690905 2931695..2932828 1 NC_005296.1 alginate o-acetyltransferase AlgJ 2932828 2690905 RPA2578 Rhodopseudomonas palustris CGA009 alginate o-acetyltransferase AlgJ NP_947920.1 2931695 D 258594 CDS NP_947921.1 39935645 2691929 complement(2933211..2933600) 1 NC_005296.1 hypothetical protein 2933600 2691929 RPA2579 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947921.1 2933211 R 258594 CDS NP_947922.1 39935646 2689158 2934119..2934784 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2934784 2689158 RPA2580 Rhodopseudomonas palustris CGA009 protein-L-isoaspartate(D-aspartate) O-methyltransferase NP_947922.1 2934119 D 258594 CDS NP_947923.1 39935647 2691994 2934830..2936386 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TolC family type I secretion outer membrane protein 2936386 2691994 RPA2581 Rhodopseudomonas palustris CGA009 TolC family type I secretion outer membrane protein NP_947923.1 2934830 D 258594 CDS NP_947924.1 39935648 2692031 2936679..2937467 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2937467 2692031 RPA2582 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947924.1 2936679 D 258594 CDS NP_947925.1 39935649 2690633 2937609..2940482 1 NC_005296.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2940482 valS 2690633 valS Rhodopseudomonas palustris CGA009 valyl-tRNA synthetase NP_947925.1 2937609 D 258594 CDS NP_947926.1 39935650 2692021 2940486..2940872 1 NC_005296.1 glyoxalase 2940872 2692021 RPA2584 Rhodopseudomonas palustris CGA009 glyoxalase NP_947926.1 2940486 D 258594 CDS NP_947927.1 39935651 2690182 2941074..2941634 1 NC_005296.1 hypothetical protein 2941634 2690182 RPA2585 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947927.1 2941074 D 258594 CDS NP_947928.1 39935652 2692114 complement(2941820..2942497) 1 NC_005296.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 2942497 3mg 2692114 3mg Rhodopseudomonas palustris CGA009 3-methyladenine DNA glycosylase NP_947928.1 2941820 R 258594 CDS NP_947929.1 39935653 2692125 2942590..2943549 1 NC_005296.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2943549 lipA2 2692125 lipA2 Rhodopseudomonas palustris CGA009 lipoyl synthase NP_947929.1 2942590 D 258594 CDS NP_947930.1 39935654 2692154 2943576..2944049 1 NC_005296.1 cyclase 2944049 2692154 RPA2588 Rhodopseudomonas palustris CGA009 cyclase NP_947930.1 2943576 D 258594 CDS NP_947931.1 39935655 2691010 complement(2944131..2944751) 1 NC_005296.1 competence damage-inducible protein A 2944751 cinA 2691010 cinA Rhodopseudomonas palustris CGA009 competence damage-inducible protein A NP_947931.1 2944131 R 258594 CDS NP_947932.1 39935656 2692207 complement(2944754..2945950) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2945950 ispD 2692207 ispD Rhodopseudomonas palustris CGA009 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP_947932.1 2944754 R 258594 CDS NP_947933.1 39935657 2692188 2946224..2947225 1 NC_005296.1 Citation: Foster-Hartnett et al. (1993) Mol. Microbiol. 8:903-914; dihydrouridine synthase TIM-barrel protein NifR3 2947225 nifR3 2692188 nifR3 Rhodopseudomonas palustris CGA009 dihydrouridine synthase TIM-barrel protein NifR3 NP_947933.1 2946224 D 258594 CDS NP_947934.1 39935658 2692200 2947222..2948394 1 NC_005296.1 observed by proteomics; Citation: Foster-Hartnett et al. (1993) Mol. Microbiol. 8:903-914; signal transduction histidine kinase nitrogen specific NtrB 2948394 ntrB 2692200 ntrB Rhodopseudomonas palustris CGA009 signal transduction histidine kinase nitrogen specific NtrB NP_947934.1 2947222 D 258594 CDS NP_947935.1 39935659 2692253 2948404..2949846 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Fis family transcriptional regulator 2949846 ntrC 2692253 ntrC Rhodopseudomonas palustris CGA009 Fis family transcriptional regulator NP_947935.1 2948404 D 258594 CDS NP_947936.1 39935660 2692211 2950006..2952297 1 NC_005296.1 Citation: Pawlowski et al. (1991) Mol. Gen. Genet. 231:124-38; observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; multi-sensor signal transduction histidine kinase 2952297 ntrY 2692211 ntrY Rhodopseudomonas palustris CGA009 multi-sensor signal transduction histidine kinase NP_947936.1 2950006 D 258594 CDS NP_947937.1 39935661 2692262 2952314..2953681 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Fis family transcriptional regulator 2953681 ntrX 2692262 ntrX Rhodopseudomonas palustris CGA009 Fis family transcriptional regulator NP_947937.1 2952314 D 258594 CDS NP_947938.1 39935662 2690226 2953722..2954579 1 NC_005296.1 catalyzes the transamination of D-amino acids and their alpha-keto acids; D-amino acid aminotransferase 2954579 2690226 RPA2596 Rhodopseudomonas palustris CGA009 D-amino acid aminotransferase NP_947938.1 2953722 D 258594 CDS NP_947939.1 39935663 2692283 2954761..2955009 1 NC_005296.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 2955009 hfq 2692283 hfq Rhodopseudomonas palustris CGA009 RNA-binding protein Hfq NP_947939.1 2954761 D 258594 CDS NP_947940.1 39935664 2692286 2955114..2956388 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; GTP-binding protein HSR1-related 2956388 2692286 RPA2598 Rhodopseudomonas palustris CGA009 GTP-binding protein HSR1-related NP_947940.1 2955114 D 258594 CDS NP_947941.2 161610772 2690239 2956591..2959332 1 NC_005296.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 2959332 gyrA 2690239 gyrA Rhodopseudomonas palustris CGA009 DNA gyrase subunit A NP_947941.2 2956591 D 258594 CDS NP_947942.1 39935666 2692329 2959517..2959936 1 NC_005296.1 hypothetical protein 2959936 2692329 RPA2600 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947942.1 2959517 D 258594 CDS NP_947943.1 39935667 2692323 2960110..2960619 1 NC_005296.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2960619 coaD 2692323 coaD Rhodopseudomonas palustris CGA009 phosphopantetheine adenylyltransferase NP_947943.1 2960110 D 258594 CDS NP_947944.1 39935668 2692313 2960636..2961199 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cyclophilin type peptidyl-prolyl cis-trans isomerase 2961199 2692313 RPA2602 Rhodopseudomonas palustris CGA009 cyclophilin type peptidyl-prolyl cis-trans isomerase NP_947944.1 2960636 D 258594 CDS NP_947945.1 39935669 2692355 2961209..2961652 1 NC_005296.1 hypothetical protein 2961652 2692355 RPA2603 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947945.1 2961209 D 258594 CDS NP_947946.1 39935670 2692346 2961628..2962095 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cyclophilin type peptidyl-prolyl cis-trans isomerase 2962095 2692346 RPA2604 Rhodopseudomonas palustris CGA009 cyclophilin type peptidyl-prolyl cis-trans isomerase NP_947946.1 2961628 D 258594 CDS NP_947947.1 39935671 2690347 2962252..2963346 1 NC_005296.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2963346 queA 2690347 queA Rhodopseudomonas palustris CGA009 S-adenosylmethionine--tRNA ribosyltransferase-isomerase NP_947947.1 2962252 D 258594 CDS NP_947948.1 39935672 2692361 2963343..2964476 1 NC_005296.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2964476 tgt 2692361 tgt Rhodopseudomonas palustris CGA009 queuine tRNA-ribosyltransferase NP_947948.1 2963343 D 258594 CDS NP_947949.1 39935673 2690336 complement(2965553..2966176) 1 NC_005296.1 transcriptional regulator 2966176 2690336 RPA2607 Rhodopseudomonas palustris CGA009 transcriptional regulator NP_947949.1 2965553 R 258594 CDS NP_947950.1 39935674 2692383 complement(2966741..2967694) 1 NC_005296.1 sulfonate binding protein 2967694 2692383 RPA2608 Rhodopseudomonas palustris CGA009 sulfonate binding protein NP_947950.1 2966741 R 258594 CDS NP_947951.1 39935675 2692456 complement(2967856..2968425) 1 NC_005296.1 monooxygenase 2968425 2692456 RPA2609 Rhodopseudomonas palustris CGA009 monooxygenase NP_947951.1 2967856 R 258594 CDS NP_947952.1 39935676 2692413 complement(2968436..2969281) 1 NC_005296.1 Citation: Vermeij et al. (1999) Mol. Microbiol. 32:913-926; aliphatic sulfonate ABC transporter ATP-binding protein 2969281 ssuB 2692413 ssuB Rhodopseudomonas palustris CGA009 aliphatic sulfonate ABC transporter ATP-binding protein NP_947952.1 2968436 R 258594 CDS NP_947953.1 39935677 2692404 complement(2969286..2970092) 1 NC_005296.1 Citation: Van Der Ploeg et al. (1999) J. Biol. Chem. 274:29358-29365; aliphatic sulfonate ABC transporter permease 2970092 2692404 RPA2611 Rhodopseudomonas palustris CGA009 aliphatic sulfonate ABC transporter permease NP_947953.1 2969286 R 258594 CDS NP_947954.1 39935678 2692478 complement(2970089..2971264) 1 NC_005296.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 2971264 msuD 2692478 msuD Rhodopseudomonas palustris CGA009 alkanesulfonate monooxygenase NP_947954.1 2970089 R 258594 CDS NP_947955.1 39935679 2690402 complement(2971309..2972256) 1 NC_005296.1 ABC transporter aliphatic sulfonate binding protein 2972256 2690402 RPA2613 Rhodopseudomonas palustris CGA009 ABC transporter aliphatic sulfonate binding protein NP_947955.1 2971309 R 258594 CDS NP_947956.1 39935680 2692483 2972643..2973920 1 NC_005296.1 hypothetical protein 2973920 2692483 RPA2614 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947956.1 2972643 D 258594 CDS NP_947957.1 39935681 2692534 2973960..2974832 1 NC_005296.1 nitrogenase iron protein 2974832 nifH2 2692534 nifH2 Rhodopseudomonas palustris CGA009 nitrogenase iron protein NP_947957.1 2973960 D 258594 CDS NP_947958.1 39935682 2692507 2974834..2976192 1 NC_005296.1 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE-like protein 2976192 2692507 RPA2616 Rhodopseudomonas palustris CGA009 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE-like protein NP_947958.1 2974834 D 258594 CDS NP_947959.1 39935683 2690481 2976189..2977439 1 NC_005296.1 vanadium nitrogenase associated protein N 2977439 2690481 RPA2617 Rhodopseudomonas palustris CGA009 vanadium nitrogenase associated protein N NP_947959.1 2976189 D 258594 CDS NP_947960.1 39935684 2690465 complement(2977601..2978587) 1 NC_005296.1 sulfonate transport system substrate-binding protein 2978587 2690465 RPA2618 Rhodopseudomonas palustris CGA009 sulfonate transport system substrate-binding protein NP_947960.1 2977601 R 258594 CDS NP_947961.1 39935685 2690458 2978920..2980524 1 NC_005296.1 GMC-type oxidoreductase 2980524 2690458 RPA2619 Rhodopseudomonas palustris CGA009 GMC-type oxidoreductase NP_947961.1 2978920 D 258594 CDS NP_947962.1 39935686 2690436 complement(2980614..2980940) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2980940 2690436 RPA2620 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947962.1 2980614 R 258594 CDS NP_947963.1 39935687 2692577 complement(2980972..2981481) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 2981481 2692577 RPA2621 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947963.1 2980972 R 258594 CDS NP_947964.1 39935688 2692555 complement(2981510..2982289) 1 NC_005296.1 Citation: Beil et al. (1995) Eur. J. Biochem. 229:385-394; sulfonate ABC transporter ATP-binding protein 2982289 2692555 RPA2622 Rhodopseudomonas palustris CGA009 sulfonate ABC transporter ATP-binding protein NP_947964.1 2981510 R 258594 CDS NP_947965.1 39935689 2692545 complement(2982289..2983131) 1 NC_005296.1 sulfonate ABC transporter permease 2983131 2692545 RPA2623 Rhodopseudomonas palustris CGA009 sulfonate ABC transporter permease NP_947965.1 2982289 R 258594 CDS NP_947966.1 39935690 2692584 complement(2983255..2984229) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sulfonate transport system substrate-binding protein 2984229 2692584 RPA2624 Rhodopseudomonas palustris CGA009 sulfonate transport system substrate-binding protein NP_947966.1 2983255 R 258594 CDS NP_947967.1 39935691 2689042 complement(2984782..2985990) 1 NC_005296.1 cystathionine or methionine gamma-lyase 2985990 2689042 RPA2625 Rhodopseudomonas palustris CGA009 cystathionine or methionine gamma-lyase NP_947967.1 2984782 R 258594 CDS NP_947968.1 39935692 2689044 complement(2986232..2987266) 1 NC_005296.1 hydrolase 2987266 2689044 RPA2626 Rhodopseudomonas palustris CGA009 hydrolase NP_947968.1 2986232 R 258594 CDS NP_947969.1 39935693 2689086 2987649..2989346 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carboxylesterase 2989346 2689086 RPA2627 Rhodopseudomonas palustris CGA009 carboxylesterase NP_947969.1 2987649 D 258594 CDS NP_947970.1 39935694 2691466 2989377..2990399 1 NC_005296.1 Citation: Walshaw and Poole (1996) Mol. Microbiol. 21:1239-52; polar amino acid ABC transport substrate-binding protein AapJ-2 2990399 aapJ-2 2691466 aapJ-2 Rhodopseudomonas palustris CGA009 polar amino acid ABC transport substrate-binding protein AapJ-2 NP_947970.1 2989377 D 258594 CDS NP_947971.1 39935695 2689126 2990420..2991589 1 NC_005296.1 Citation: Walshaw and Poole (1996) Mol. Microbiol. 21:1239-52; polar amino acid ABC transpor permease AapQ-2 2991589 aapQ-2 2689126 aapQ-2 Rhodopseudomonas palustris CGA009 polar amino acid ABC transpor permease AapQ-2 NP_947971.1 2990420 D 258594 CDS NP_947972.1 39935696 2690991 2991586..2992668 1 NC_005296.1 Citation: Walshaw and Poole (1996) Mol. Microbiol. 21:1239-52; polar amino acid ABC transporter protein AapM-2 2992668 aapM-2 2690991 aapM-2 Rhodopseudomonas palustris CGA009 polar amino acid ABC transporter protein AapM-2 NP_947972.1 2991586 D 258594 CDS NP_947973.1 39935697 2692706 2993216..2994244 1 NC_005296.1 ABC transporter substrate-binding periplasmic protein 2994244 2692706 RPA2631 Rhodopseudomonas palustris CGA009 ABC transporter substrate-binding periplasmic protein NP_947973.1 2993216 D 258594 CDS NP_947974.1 39935698 2690493 2994255..2995253 1 NC_005296.1 ABC transporter permease 2995253 2690493 RPA2632 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947974.1 2994255 D 258594 CDS NP_947975.1 39935699 2690485 2995253..2996065 1 NC_005296.1 nitrate ABC transporter ATP-binding protein 2996065 2690485 RPA2633 Rhodopseudomonas palustris CGA009 nitrate ABC transporter ATP-binding protein NP_947975.1 2995253 D 258594 CDS NP_947976.1 39935700 2690518 2996908..2997804 1 NC_005296.1 nitrogenase iron-molybdenum cofactor biosynthesis protein NifB 2997804 nifB1 2690518 nifB1 Rhodopseudomonas palustris CGA009 nitrogenase iron-molybdenum cofactor biosynthesis protein NifB NP_947976.1 2996908 D 258594 CDS NP_947977.1 39935701 2688851 2997843..2998712 1 NC_005296.1 nitrogenase reductase NifH subunit 2998712 nifH3 2688851 nifH3 Rhodopseudomonas palustris CGA009 nitrogenase reductase NifH subunit NP_947977.1 2997843 D 258594 CDS NP_947978.1 39935702 2692784 2998778..3000286 1 NC_005296.1 nitrogenase molybdenum-iron protein subunit alpha 3000286 NifD2 2692784 NifD2 Rhodopseudomonas palustris CGA009 nitrogenase molybdenum-iron protein subunit alpha NP_947978.1 2998778 D 258594 CDS NP_947979.1 39935703 2692813 3000298..3001680 1 NC_005296.1 nitrogenase iron-molybdenum protein subunit nifK-like protein 3001680 2692813 RPA2637 Rhodopseudomonas palustris CGA009 nitrogenase iron-molybdenum protein subunit nifK-like protein NP_947979.1 3000298 D 258594 CDS NP_947980.1 39935704 2690523 3001975..3003279 1 NC_005296.1 oxidoreductase 3003279 2690523 RPA2638 Rhodopseudomonas palustris CGA009 oxidoreductase NP_947980.1 3001975 D 258594 CDS NP_947981.1 39935705 2691055 complement(3003327..3003812) 1 NC_005296.1 L-2-amino-thiazoline-4-carboxylic acid hydrolase 3003812 2691055 RPA2639 Rhodopseudomonas palustris CGA009 L-2-amino-thiazoline-4-carboxylic acid hydrolase NP_947981.1 3003327 R 258594 CDS NP_947982.1 39935706 2691041 complement(3003809..3004531) 1 NC_005296.1 isochorismatase hydrolase family protein 3004531 2691041 RPA2640 Rhodopseudomonas palustris CGA009 isochorismatase hydrolase family protein NP_947982.1 3003809 R 258594 CDS NP_947983.1 39935707 2692832 complement(3004528..3006129) 1 NC_005296.1 ABC transporter oligopeptide-binding protein 3006129 2692832 RPA2641 Rhodopseudomonas palustris CGA009 ABC transporter oligopeptide-binding protein NP_947983.1 3004528 R 258594 CDS NP_947984.1 39935708 2692823 3006354..3007244 1 NC_005296.1 LysR family transcriptional regulator 3007244 2692823 RPA2642 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_947984.1 3006354 D 258594 CDS NP_947985.1 39935709 2692856 complement(3007305..3008927) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter ATP-binding protein 3008927 2692856 RPA2643 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_947985.1 3007305 R 258594 CDS NP_947986.1 39935710 2692847 complement(3008924..3009754) 1 NC_005296.1 ABC transporter permease 3009754 2692847 RPA2644 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947986.1 3008924 R 258594 CDS NP_947987.1 39935711 2688826 complement(3009759..3010736) 1 NC_005296.1 ABC transporter permease 3010736 2688826 RPA2645 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_947987.1 3009759 R 258594 CDS NP_947988.1 39935712 2692956 complement(3010761..3012377) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter oligopeptide-binding protein 3012377 2692956 RPA2646 Rhodopseudomonas palustris CGA009 ABC transporter oligopeptide-binding protein NP_947988.1 3010761 R 258594 CDS NP_947989.1 39935713 2693002 complement(3012547..3013713) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydrolase 3013713 2693002 RPA2647 Rhodopseudomonas palustris CGA009 hydrolase NP_947989.1 3012547 R 258594 CDS NP_947990.1 39935714 2692981 complement(3013743..3014525) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3014525 2692981 RPA2648 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947990.1 3013743 R 258594 CDS NP_947991.1 39935715 2693025 3015504..3015860 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3015860 2693025 RPA2649 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947991.1 3015504 D 258594 CDS NP_947992.1 39935716 2692989 complement(3015857..3016726) 1 NC_005296.1 DMT family permease 3016726 2692989 RPA2650 Rhodopseudomonas palustris CGA009 DMT family permease NP_947992.1 3015857 R 258594 CDS NP_947993.1 39935717 2693034 3016936..3017337 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; endoribonuclease protein synthesis inhibitor 3017337 2693034 RPA2651 Rhodopseudomonas palustris CGA009 endoribonuclease protein synthesis inhibitor NP_947993.1 3016936 D 258594 CDS NP_947994.1 39935718 2690962 3017428..3017631 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3017631 2690962 RPA2652 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947994.1 3017428 D 258594 CDS NP_947995.1 39935719 2690946 complement(3017745..3017924) 1 NC_005296.1 Citation: Tadros and Waterkamp (1989) EMBO J. 8:1303-1308; light harvesting protein B-800-850 alpha subunit A 3017924 pucAa 2690946 pucAa Rhodopseudomonas palustris CGA009 light harvesting protein B-800-850 alpha subunit A NP_947995.1 3017745 R 258594 CDS NP_947996.1 39935720 2690607 complement(3017950..3018093) 1 NC_005296.1 light harvesting protein B-800-850 beta subunit A 3018093 pucBa 2690607 pucBa Rhodopseudomonas palustris CGA009 light harvesting protein B-800-850 beta subunit A NP_947996.1 3017950 R 258594 CDS NP_947997.1 39935721 2689934 complement(3018684..3021518) 1 NC_005296.1 Citation: Bhagwat and Keister (1995) Mol. Plant Microbe Interact. 8:366-370; family 2 glycosyl transferase 3021518 2689934 RPA2655 Rhodopseudomonas palustris CGA009 family 2 glycosyl transferase NP_947997.1 3018684 R 258594 CDS NP_947998.1 39935722 2690699 complement(3021706..3022284) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3022284 2690699 RPA2656 Rhodopseudomonas palustris CGA009 hypothetical protein NP_947998.1 3021706 R 258594 CDS NP_947999.1 39935723 2690740 3022547..3024181 1 NC_005296.1 observed by proteomics; Citation: Bhagwat et al. (1996) J. Bact. 178:4635-4642; beta (1-6) glucans synthase 3024181 2690740 RPA2657 Rhodopseudomonas palustris CGA009 beta (1-6) glucans synthase NP_947999.1 3022547 D 258594 CDS NP_948000.1 39935724 2690795 complement(3024595..3025986) 1 NC_005296.1 hypothetical protein 3025986 2690795 RPA2658 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948000.1 3024595 R 258594 CDS NP_948001.1 39935725 2690851 3026154..3027512 1 NC_005296.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 3027512 glmU 2690851 glmU Rhodopseudomonas palustris CGA009 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase NP_948001.1 3026154 D 258594 CDS NP_948002.1 39935726 2690835 3027638..3029464 1 NC_005296.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 3029464 glmS 2690835 glmS Rhodopseudomonas palustris CGA009 glucosamine--fructose-6-phosphate aminotransferase NP_948002.1 3027638 D 258594 CDS NP_948003.1 39935727 2690830 3029723..3030526 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3030526 2690830 RPA2661 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948003.1 3029723 D 258594 CDS NP_948004.1 39935728 2690932 complement(3030557..3032659) 1 NC_005296.1 ATP-dependent DNA helicase 3032659 recG 2690932 recG Rhodopseudomonas palustris CGA009 ATP-dependent DNA helicase NP_948004.1 3030557 R 258594 CDS NP_948005.1 39935729 2688841 3033100..3036618 1 NC_005296.1 transcription-repair coupling factor 3036618 Mfd 2688841 Mfd Rhodopseudomonas palustris CGA009 transcription-repair coupling factor NP_948005.1 3033100 D 258594 CDS NP_948006.1 39935730 2691107 complement(3036761..3037993) 1 NC_005296.1 hypothetical protein 3037993 2691107 RPA2664 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948006.1 3036761 R 258594 CDS NP_948007.1 39935731 2693555 complement(3038042..3039577) 1 NC_005296.1 acid-CoA ligase 3039577 2693555 RPA2665 Rhodopseudomonas palustris CGA009 acid-CoA ligase NP_948007.1 3038042 R 258594 CDS NP_948008.1 39935732 2693476 complement(3039582..3041462) 1 NC_005296.1 family 5 extracellular solute-binding protein 3041462 2693476 RPA2666 Rhodopseudomonas palustris CGA009 family 5 extracellular solute-binding protein NP_948008.1 3039582 R 258594 CDS NP_948009.1 39935733 2693515 3041681..3042427 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; invasion associated locus B 3042427 2693515 RPA2667 Rhodopseudomonas palustris CGA009 invasion associated locus B NP_948009.1 3041681 D 258594 CDS NP_948010.1 39935734 2693554 complement(3042513..3043187) 1 NC_005296.1 hypothetical protein 3043187 2693554 RPA2668 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948010.1 3042513 R 258594 CDS NP_948011.1 39935735 2693614 complement(3043229..3043561) 1 NC_005296.1 hemimethylated DNA-binding region 3043561 2693614 RPA2669 Rhodopseudomonas palustris CGA009 hemimethylated DNA-binding region NP_948011.1 3043229 R 258594 CDS NP_948012.1 39935736 2693306 3043684..3044640 1 NC_005296.1 auxin efflux carrier 3044640 2693306 RPA2670 Rhodopseudomonas palustris CGA009 auxin efflux carrier NP_948012.1 3043684 D 258594 CDS NP_948013.1 39935737 2693257 complement(3044646..3045842) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-octaprenyl-6-methoxyphenyl hydroxylase 3045842 2693257 RPA2671 Rhodopseudomonas palustris CGA009 2-octaprenyl-6-methoxyphenyl hydroxylase NP_948013.1 3044646 R 258594 CDS NP_948014.1 39935738 2693173 3045976..3046710 1 NC_005296.1 Citation: Sohlenkamp et al. (2000) J. Biol. Chem. 275:18919-18925; phosphatidylcholine synthase 3046710 2693173 RPA2672 Rhodopseudomonas palustris CGA009 phosphatidylcholine synthase NP_948014.1 3045976 D 258594 CDS NP_948015.1 39935739 2693196 3046707..3047429 1 NC_005296.1 hypothetical protein 3047429 2693196 RPA2673 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948015.1 3046707 D 258594 CDS NP_948016.1 39935740 2693619 3047516..3048490 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; quinone oxidoreductase 3048490 2693619 RPA2674 Rhodopseudomonas palustris CGA009 quinone oxidoreductase NP_948016.1 3047516 D 258594 CDS NP_948017.1 39935741 2693161 complement(3048669..3049994) 1 NC_005296.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 3049994 rimO 2693161 rimO Rhodopseudomonas palustris CGA009 ribosomal protein S12 methylthiotransferase NP_948017.1 3048669 R 258594 CDS NP_948018.1 39935742 2693170 complement(3050394..3051308) 1 NC_005296.1 LysR family transcriptional regulator 3051308 2693170 RPA2676 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_948018.1 3050394 R 258594 CDS NP_948019.1 39935743 2693169 3051410..3052366 1 NC_005296.1 ABC transporter substrate-binding protein 3052366 2693169 RPA2677 Rhodopseudomonas palustris CGA009 ABC transporter substrate-binding protein NP_948019.1 3051410 D 258594 CDS NP_948020.1 39935744 2693406 3052374..3053258 1 NC_005296.1 ABC transporter permease 3053258 2693406 RPA2678 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_948020.1 3052374 D 258594 CDS NP_948021.1 39935745 2693413 3053251..3054069 1 NC_005296.1 transport system ATP-binding protein 3054069 2693413 RPA2679 Rhodopseudomonas palustris CGA009 transport system ATP-binding protein NP_948021.1 3053251 D 258594 CDS NP_948022.1 39935746 2693415 3054071..3054922 1 NC_005296.1 hypothetical protein 3054922 2693415 RPA2680 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948022.1 3054071 D 258594 CDS NP_948023.1 39935747 2693427 complement(3054938..3055702) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; LamB/YcsF family protein 3055702 2693427 RPA2681 Rhodopseudomonas palustris CGA009 LamB/YcsF family protein NP_948023.1 3054938 R 258594 CDS NP_948024.1 39935748 2693430 complement(3055730..3056740) 1 NC_005296.1 allophanate hydrolase subunit 2 3056740 uahA 2693430 uahA Rhodopseudomonas palustris CGA009 allophanate hydrolase subunit 2 NP_948024.1 3055730 R 258594 CDS NP_948025.1 39935749 2693343 complement(3056737..3057465) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3057465 dur1 2693343 dur1 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948025.1 3056737 R 258594 CDS NP_948026.1 39935750 2693320 3057686..3058399 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3058399 2693320 RPA2684 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948026.1 3057686 D 258594 CDS NP_948027.1 39935751 2693293 3058412..3058819 1 NC_005296.1 hypothetical protein 3058819 2693293 RPA2685 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948027.1 3058412 D 258594 CDS NP_948028.1 39935752 2693240 3058948..3059841 1 NC_005296.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3059841 dapA 2693240 dapA Rhodopseudomonas palustris CGA009 dihydrodipicolinate synthase NP_948028.1 3058948 D 258594 CDS NP_948029.1 39935753 2693250 3059852..3060331 1 NC_005296.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 3060331 mscL 2693250 mscL Rhodopseudomonas palustris CGA009 large-conductance mechanosensitive channel NP_948029.1 3059852 D 258594 CDS NP_948030.1 39935754 2693226 3060369..3060842 1 NC_005296.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 3060842 smpB 2693226 smpB Rhodopseudomonas palustris CGA009 SsrA-binding protein NP_948030.1 3060369 D 258594 CDS NP_948031.1 39935755 2693227 3060865..3061443 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; thiol-specific antioxidant-like protein 3061443 2693227 RPA2689 Rhodopseudomonas palustris CGA009 thiol-specific antioxidant-like protein NP_948031.1 3060865 D 258594 CDS NP_948032.1 39935756 2693233 complement(3061557..3062231) 1 NC_005296.1 uracil-DNA glycosylase 3062231 2693233 RPA2690 Rhodopseudomonas palustris CGA009 uracil-DNA glycosylase NP_948032.1 3061557 R 258594 CDS NP_948033.1 39935757 2693378 complement(3062237..3062887) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3062887 2693378 RPA2691 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948033.1 3062237 R 258594 CDS NP_948034.1 39935758 2693387 3063234..3063626 1 NC_005296.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 3063626 rnpO 2693387 rnpO Rhodopseudomonas palustris CGA009 DNA-directed RNA polymerase subunit omega NP_948034.1 3063234 D 258594 CDS NP_948035.1 39935759 2693478 3063892..3066174 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; GTP pyrophosphokinase 3066174 relA 2693478 relA Rhodopseudomonas palustris CGA009 GTP pyrophosphokinase NP_948035.1 3063892 D 258594 CDS NP_948036.1 39935760 2693510 3066324..3067088 1 NC_005296.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 3067088 pdxJ 2693510 pdxJ Rhodopseudomonas palustris CGA009 pyridoxine 5'-phosphate synthase NP_948036.1 3066324 D 258594 CDS NP_948037.1 39935761 2693522 3067085..3067525 1 NC_005296.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 3067525 acpS 2693522 acpS Rhodopseudomonas palustris CGA009 4'-phosphopantetheinyl transferase NP_948037.1 3067085 D 258594 CDS NP_948038.1 39935762 2693541 3067767..3068525 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase S26A signal peptidase I 3068525 lepB2 2693541 lepB2 Rhodopseudomonas palustris CGA009 peptidase S26A signal peptidase I NP_948038.1 3067767 D 258594 CDS NP_948039.1 39935763 2693581 3068522..3069340 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ribonuclease III 3069340 2693581 RPA2697 Rhodopseudomonas palustris CGA009 ribonuclease III NP_948039.1 3068522 D 258594 CDS NP_948040.1 39935764 2693602 3069330..3070256 1 NC_005296.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 3070256 era 2693602 era Rhodopseudomonas palustris CGA009 GTP-binding protein Era NP_948040.1 3069330 D 258594 CDS NP_948041.1 39935765 2693611 3070253..3070654 1 NC_005296.1 hypothetical protein 3070654 2693611 RPA2699 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948041.1 3070253 D 258594 CDS NP_948042.1 39935766 2693207 3070697..3071449 1 NC_005296.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 3071449 recO 2693207 recO Rhodopseudomonas palustris CGA009 DNA repair protein RecO NP_948042.1 3070697 D 258594 CDS NP_948043.1 39935767 2693328 complement(3071489..3072358) 1 NC_005296.1 hypothetical protein 3072358 2693328 RPA2701 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948043.1 3071489 R 258594 CDS NP_948044.1 39935768 2693212 3072441..3072953 1 NC_005296.1 MarR family transcriptional regulator 3072953 2693212 RPA2702 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_948044.1 3072441 D 258594 CDS NP_948045.1 39935769 2693291 3072963..3075224 1 NC_005296.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 3075224 parC 2693291 parC Rhodopseudomonas palustris CGA009 DNA topoisomerase IV subunit A NP_948045.1 3072963 D 258594 CDS NP_948046.1 39935770 2693278 3075310..3076740 1 NC_005296.1 Na+ antiporter 3076740 2693278 RPA2704 Rhodopseudomonas palustris CGA009 Na+ antiporter NP_948046.1 3075310 D 258594 CDS NP_948047.1 39935771 2693260 complement(3076754..3077119) 1 NC_005296.1 hypothetical protein 3077119 2693260 RPA2705 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948047.1 3076754 R 258594 CDS NP_948048.1 39935772 2693333 3077204..3078577 1 NC_005296.1 Citation: Kehres et al. (2000) Mol. Microbiol. 36:1085-1100; manganese transport protein MntH 3078577 2693333 RPA2706 Rhodopseudomonas palustris CGA009 manganese transport protein MntH NP_948048.1 3077204 D 258594 CDS NP_948049.1 39935773 2693248 complement(3078637..3079458) 1 NC_005296.1 AraC family transcriptional regulator 3079458 2693248 RPA2707 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_948049.1 3078637 R 258594 CDS NP_948050.1 39935774 2693246 3079565..3081658 1 NC_005296.1 fusaric acid resistance pump 3081658 2693246 RPA2708 Rhodopseudomonas palustris CGA009 fusaric acid resistance pump NP_948050.1 3079565 D 258594 CDS NP_948051.1 39935775 2693183 3081648..3081863 1 NC_005296.1 hypothetical protein 3081863 2693183 RPA2708a Rhodopseudomonas palustris CGA009 hypothetical protein NP_948051.1 3081648 D 258594 CDS NP_948052.1 39935776 2693199 3081860..3082762 1 NC_005296.1 FusE-MFP/HlyD family membrane protein 3082762 2693199 RPA2709 Rhodopseudomonas palustris CGA009 FusE-MFP/HlyD family membrane protein NP_948052.1 3081860 D 258594 CDS NP_948053.1 39935777 2693247 complement(3082855..3083631) 1 NC_005296.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 3083631 2693247 RPA2710 Rhodopseudomonas palustris CGA009 arginyl-tRNA-protein transferase NP_948053.1 3082855 R 258594 CDS NP_948054.1 39935778 2693252 complement(3083700..3084314) 1 NC_005296.1 hypothetical protein 3084314 2693252 RPA2711 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948054.1 3083700 R 258594 CDS NP_948055.1 39935779 2693405 complement(3084385..3085437) 1 NC_005296.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3085437 hemB 2693405 hemB Rhodopseudomonas palustris CGA009 delta-aminolevulinic acid dehydratase NP_948055.1 3084385 R 258594 CDS NP_948056.1 39935780 2693398 3085631..3086095 1 NC_005296.1 hypothetical protein 3086095 2693398 RPA2713 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948056.1 3085631 D 258594 CDS NP_948057.1 39935781 2693165 3086173..3087738 1 NC_005296.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 3087738 2693165 RPA2714 Rhodopseudomonas palustris CGA009 acyl-CoA synthetase NP_948057.1 3086173 D 258594 CDS NP_948058.1 39935782 2693617 3088091..3088609 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; MarR family transcriptional regulator 3088609 2693617 RPA2715 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_948058.1 3088091 D 258594 CDS NP_948059.1 39935783 2693600 3088824..3089051 1 NC_005296.1 hypothetical protein 3089051 2693600 RPA2716 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948059.1 3088824 D 258594 CDS NP_948060.1 39935784 2693596 3089068..3089283 1 NC_005296.1 hypothetical protein 3089283 2693596 RPA2717 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948060.1 3089068 D 258594 CDS NP_948061.1 39935785 2693578 3089301..3089864 1 NC_005296.1 hypothetical protein 3089864 2693578 RPA2718 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948061.1 3089301 D 258594 CDS NP_948062.1 39935786 2693552 3089902..3090321 1 NC_005296.1 hypothetical protein 3090321 2693552 RPA2719 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948062.1 3089902 D 258594 CDS NP_948063.1 39935787 2693388 complement(3090492..3091364) 1 NC_005296.1 YghU; B2989; one of eight glutathione transferase proteins from E. coli; glutathione S-transferase 3091364 2693388 RPA2720 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_948063.1 3090492 R 258594 CDS NP_948064.1 39935788 2693384 3091573..3091842 1 NC_005296.1 hypothetical protein 3091842 2693384 RPA2721 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948064.1 3091573 D 258594 CDS NP_948065.1 39935789 2693566 complement(3092068..3092691) 1 NC_005296.1 MutT domain-containing protein 3092691 2693566 RPA2722 Rhodopseudomonas palustris CGA009 MutT domain-containing protein NP_948065.1 3092068 R 258594 CDS NP_948066.1 39935790 2693608 complement(3092917..3093480) 1 NC_005296.1 hypothetical protein 3093480 2693608 RPA2723 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948066.1 3092917 R 258594 CDS NP_948067.1 39935791 2693455 3093944..3095242 1 NC_005296.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3095242 glyA 2693455 glyA Rhodopseudomonas palustris CGA009 serine hydroxymethyltransferase NP_948067.1 3093944 D 258594 CDS NP_948068.1 39935792 2693448 3095345..3095827 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; transcriptional regulator NrdR 3095827 nrdR 2693448 nrdR Rhodopseudomonas palustris CGA009 transcriptional regulator NrdR NP_948068.1 3095345 D 258594 CDS NP_948069.1 39935793 2693551 3095824..3096993 1 NC_005296.1 EC_number 1.1.193.-; observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; riboflavin biosynthesis protein RibD 3096993 ribD 2693551 ribD Rhodopseudomonas palustris CGA009 riboflavin biosynthesis protein RibD NP_948069.1 3095824 D 258594 CDS NP_948070.1 39935794 2693539 3097004..3097612 1 NC_005296.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3097612 ribC 2693539 ribC Rhodopseudomonas palustris CGA009 riboflavin synthase subunit alpha NP_948070.1 3097004 D 258594 CDS NP_948071.1 39935795 2693505 3097743..3098234 1 NC_005296.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3098234 ribH 2693505 ribH Rhodopseudomonas palustris CGA009 6,7-dimethyl-8-ribityllumazine synthase NP_948071.1 3097743 D 258594 CDS NP_948072.1 39935796 2693501 3098240..3098764 1 NC_005296.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3098764 nusB 2693501 nusB Rhodopseudomonas palustris CGA009 transcription antitermination protein NusB NP_948072.1 3098240 D 258594 CDS NP_948073.1 39935797 2693500 3098958..3099938 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; thiamine-monophosphate kinase 3099938 thiL 2693500 thiL Rhodopseudomonas palustris CGA009 thiamine-monophosphate kinase NP_948073.1 3098958 D 258594 CDS NP_948074.1 39935798 2693498 3100167..3102287 1 NC_005296.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 3102287 hppA 2693498 hppA Rhodopseudomonas palustris CGA009 membrane-bound proton-translocating pyrophosphatase NP_948074.1 3100167 D 258594 CDS NP_948075.1 39935799 2693535 3102449..3102691 1 NC_005296.1 hypothetical protein 3102691 2693535 RPA2732 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948075.1 3102449 D 258594 CDS NP_948076.1 39935800 2693531 3103016..3103174 1 NC_005296.1 hypothetical protein 3103174 2693531 RPA2733 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948076.1 3103016 D 258594 CDS NP_948077.1 39935801 2693529 3103212..3104075 1 NC_005296.1 epoxide hydrolase 3104075 2693529 RPA2734 Rhodopseudomonas palustris CGA009 epoxide hydrolase NP_948077.1 3103212 D 258594 CDS NP_948078.1 39935802 2693527 3104271..3105464 1 NC_005296.1 RND multidrug efflux membrane fusion protein MexC 3105464 mexC2 2693527 mexC2 Rhodopseudomonas palustris CGA009 RND multidrug efflux membrane fusion protein MexC NP_948078.1 3104271 D 258594 CDS NP_948079.1 39935803 2693434 3105483..3108614 1 NC_005296.1 RND multidrug efflux transporter MexD 3108614 mexD2 2693434 mexD2 Rhodopseudomonas palustris CGA009 RND multidrug efflux transporter MexD NP_948079.1 3105483 D 258594 CDS NP_948080.1 39935804 2693433 complement(3108667..3109152) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; SmpA/OmlA 3109152 2693433 RPA2737 Rhodopseudomonas palustris CGA009 SmpA/OmlA NP_948080.1 3108667 R 258594 CDS NP_948081.1 39935805 2693407 3109261..3109797 1 NC_005296.1 ubiquinol-cytochrome C chaperone 3109797 2693407 RPA2738 Rhodopseudomonas palustris CGA009 ubiquinol-cytochrome C chaperone NP_948081.1 3109261 D 258594 CDS NP_948082.1 39935806 2693431 3109815..3110381 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3110381 2693431 RPA2739 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948082.1 3109815 D 258594 CDS NP_948083.1 39935807 2693557 3110622..3111683 1 NC_005296.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 3111683 plsX 2693557 plsX Rhodopseudomonas palustris CGA009 glycerol-3-phosphate acyltransferase PlsX NP_948083.1 3110622 D 258594 CDS NP_948084.1 39935808 2693556 3111680..3112657 1 NC_005296.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 3112657 fabH 2693556 fabH Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP synthase NP_948084.1 3111680 D 258594 CDS NP_948085.1 39935809 2693612 3112791..3113147 1 NC_005296.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 3113147 ihfA 2693612 ihfA Rhodopseudomonas palustris CGA009 integration host factor subunit alpha NP_948085.1 3112791 D 258594 CDS NP_948086.1 39935810 2693338 3113162..3113914 1 NC_005296.1 MerR family transcriptional regulator 3113914 2693338 RPA2743 Rhodopseudomonas palustris CGA009 MerR family transcriptional regulator NP_948086.1 3113162 D 258594 CDS NP_948087.1 39935811 2693259 3114466..3114693 1 NC_005296.1 hypothetical protein 3114693 2693259 RPA2744 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948087.1 3114466 D 258594 CDS NP_948088.1 39935812 2693272 3115010..3117304 1 NC_005296.1 ferric siderophore receptor protein 3117304 2693272 RPA2745 Rhodopseudomonas palustris CGA009 ferric siderophore receptor protein NP_948088.1 3115010 D 258594 CDS NP_948089.1 39935813 2693288 3117464..3117901 1 NC_005296.1 hypothetical protein 3117901 2693288 RPA2746 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948089.1 3117464 D 258594 CDS NP_948090.1 39935814 2693186 complement(3118016..3118333) 1 NC_005296.1 hypothetical protein 3118333 2693186 RPA2747 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948090.1 3118016 R 258594 CDS NP_948091.1 39935815 2693340 3118557..3119525 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase 3119525 2693340 RPA2748 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase NP_948091.1 3118557 D 258594 CDS NP_948092.1 39935816 2693241 3119564..3120349 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3120349 2693241 RPA2749 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948092.1 3119564 D 258594 CDS NP_948093.1 39935817 2693229 complement(3120549..3122105) 1 NC_005296.1 sugar transferase 3122105 2693229 RPA2750 Rhodopseudomonas palustris CGA009 sugar transferase NP_948093.1 3120549 R 258594 CDS NP_948094.1 39935818 2693404 complement(3122216..3123391) 1 NC_005296.1 group 1 glycosyl transferase 3123391 2693404 RPA2751 Rhodopseudomonas palustris CGA009 group 1 glycosyl transferase NP_948094.1 3122216 R 258594 CDS NP_948095.1 39935819 2693379 3123858..3125993 1 NC_005296.1 lipopolysaccharide biosynthesis 3125993 2693379 RPA2752 Rhodopseudomonas palustris CGA009 lipopolysaccharide biosynthesis NP_948095.1 3123858 D 258594 CDS NP_948096.1 39935820 2693530 complement(3126073..3127266) 1 NC_005296.1 hypothetical protein 3127266 2693530 RPA2753 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948096.1 3126073 R 258594 CDS NP_948097.1 39935821 2693528 3127397..3128449 1 NC_005296.1 polysaccharide deacetylase 3128449 2693528 RPA2754 Rhodopseudomonas palustris CGA009 polysaccharide deacetylase NP_948097.1 3127397 D 258594 CDS NP_948098.1 39935822 2693559 complement(3128515..3128997) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DNA-binding stress protein 3128997 2693559 RPA2755 Rhodopseudomonas palustris CGA009 DNA-binding stress protein NP_948098.1 3128515 R 258594 CDS NP_948099.1 39935823 2693567 3129278..3130285 1 NC_005296.1 hypothetical protein 3130285 2693567 RPA2756 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948099.1 3129278 D 258594 CDS NP_948100.1 39935824 2693369 complement(3130373..3130585) 1 NC_005296.1 hypothetical protein 3130585 2693369 RPA2757 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948100.1 3130373 R 258594 CDS NP_948101.1 39935825 2693606 3130682..3131788 1 NC_005296.1 cytochrome oxidase assembly 3131788 2693606 RPA2758 Rhodopseudomonas palustris CGA009 cytochrome oxidase assembly NP_948101.1 3130682 D 258594 CDS NP_948102.1 39935826 2693391 complement(3131802..3132479) 1 NC_005296.1 TetR family transcriptional regulator 3132479 2693391 RPA2759 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_948102.1 3131802 R 258594 CDS NP_948103.1 39935827 2693520 complement(3132481..3134283) 1 NC_005296.1 benzaldehyde lyase 3134283 2693520 RPA2760 Rhodopseudomonas palustris CGA009 benzaldehyde lyase NP_948103.1 3132481 R 258594 CDS NP_948104.1 39935828 2693230 3134350..3134721 1 NC_005296.1 oxidoreductase 3134721 2693230 RPA2761 Rhodopseudomonas palustris CGA009 oxidoreductase NP_948104.1 3134350 D 258594 CDS NP_948105.1 39935829 2693516 complement(3134810..3135382) 1 NC_005296.1 hypothetical protein 3135382 2693516 RPA2762 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948105.1 3134810 R 258594 CDS NP_948106.1 39935830 2693234 complement(3135410..3136690) 1 NC_005296.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 3136690 2693234 RPA2763 Rhodopseudomonas palustris CGA009 O-acetylhomoserine aminocarboxypropyltransferase NP_948106.1 3135410 R 258594 CDS NP_948107.1 39935831 2693245 complement(3136785..3137369) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; CoA-binding protein 3137369 2693245 RPA2764 Rhodopseudomonas palustris CGA009 CoA-binding protein NP_948107.1 3136785 R 258594 CDS NP_948108.1 39935832 2693243 complement(3137519..3138346) 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3138346 2693243 RPA2765 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_948108.1 3137519 R 258594 CDS NP_948109.1 39935833 2693238 3138437..3138865 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phenylacetic acid degradation-like protein 3138865 2693238 RPA2766 Rhodopseudomonas palustris CGA009 phenylacetic acid degradation-like protein NP_948109.1 3138437 D 258594 CDS NP_948110.1 39935834 2693365 3139021..3139485 1 NC_005296.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 3139485 rplM 2693365 rplM Rhodopseudomonas palustris CGA009 50S ribosomal protein L13 NP_948110.1 3139021 D 258594 CDS NP_948111.1 39935835 2693437 3139487..3139969 1 NC_005296.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 3139969 rpsI 2693437 rpsI Rhodopseudomonas palustris CGA009 30S ribosomal protein S9 NP_948111.1 3139487 D 258594 CDS NP_948112.1 39935836 2693506 3140244..3141479 1 NC_005296.1 diguanylate cyclase 3141479 2693506 RPA2769 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_948112.1 3140244 D 258594 CDS NP_948113.1 39935837 2693325 3141558..3141860 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; antibiotic biosynthesis monooxygenase 3141860 2693325 RPA2770 Rhodopseudomonas palustris CGA009 antibiotic biosynthesis monooxygenase NP_948113.1 3141558 D 258594 CDS NP_948114.1 39935838 2693235 complement(3141844..3143010) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3143010 2693235 RPA2771 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948114.1 3141844 R 258594 CDS NP_948115.1 39935839 2693499 3143257..3144204 1 NC_005296.1 rare lipoprotein A 3144204 rlpA2 2693499 rlpA2 Rhodopseudomonas palustris CGA009 rare lipoprotein A NP_948115.1 3143257 D 258594 CDS NP_948116.1 39935840 2693386 complement(3144233..3145183) 1 NC_005296.1 epoxide hydrolase 3145183 2693386 RPA2773 Rhodopseudomonas palustris CGA009 epoxide hydrolase NP_948116.1 3144233 R 258594 CDS NP_948117.1 39935841 2693491 3145328..3146569 1 NC_005296.1 Serine-type D-Ala-D-Ala carboxypeptidase 3146569 2693491 RPA2774 Rhodopseudomonas palustris CGA009 Serine-type D-Ala-D-Ala carboxypeptidase NP_948117.1 3145328 D 258594 CDS NP_948118.1 39935842 2693231 3146572..3147264 1 NC_005296.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 3147264 2693231 RPA2775 Rhodopseudomonas palustris CGA009 thymidylate kinase NP_948118.1 3146572 D 258594 CDS NP_948119.1 39935843 2693580 3147261..3148316 1 NC_005296.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 3148316 2693580 RPA2776 Rhodopseudomonas palustris CGA009 DNA polymerase III subunit delta' NP_948119.1 3147261 D 258594 CDS NP_948120.1 39935844 2693239 3148397..3149941 1 NC_005296.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 3149941 metG 2693239 metG Rhodopseudomonas palustris CGA009 methionyl-tRNA synthetase NP_948120.1 3148397 D 258594 CDS NP_948121.1 39935845 2693281 3149945..3150733 1 NC_005296.1 TatD-related deoxyribonuclease 3150733 2693281 RPA2778 Rhodopseudomonas palustris CGA009 TatD-related deoxyribonuclease NP_948121.1 3149945 D 258594 CDS NP_948122.1 39935846 2693263 3150759..3151562 1 NC_005296.1 hydrolase 3151562 2693263 RPA2779 Rhodopseudomonas palustris CGA009 hydrolase NP_948122.1 3150759 D 258594 CDS NP_948123.1 39935847 2693255 complement(3151757..3153406) 1 NC_005296.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 3153406 2693255 RPA2780 Rhodopseudomonas palustris CGA009 acyl-CoA synthetase NP_948123.1 3151757 R 258594 CDS NP_948124.1 39935848 2693564 complement(3153461..3155344) 1 NC_005296.1 TrapT dctQ-M fusion permease dicarboxylate transport 3155344 dctQ2 2693564 dctQ2 Rhodopseudomonas palustris CGA009 TrapT dctQ-M fusion permease dicarboxylate transport NP_948124.1 3153461 R 258594 CDS NP_948125.1 39935849 2693339 complement(3155357..3156376) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TRAP dicarboxylate family transporter subunit DctP 3156376 dctP2 2693339 dctP2 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctP NP_948125.1 3155357 R 258594 CDS NP_948126.1 39935850 2693572 complement(3156741..3157331) 1 NC_005296.1 hypothetical protein 3157331 2693572 RPA2783 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948126.1 3156741 R 258594 CDS NP_948127.1 39935851 2693576 3157632..3158327 1 NC_005296.1 nodulin-like protein 3158327 2693576 RPA2784 Rhodopseudomonas palustris CGA009 nodulin-like protein NP_948127.1 3157632 D 258594 CDS NP_948128.1 39935852 2693211 complement(3158421..3159758) 1 NC_005296.1 flavodoxin oxidoreductase 3159758 2693211 RPA2785 Rhodopseudomonas palustris CGA009 flavodoxin oxidoreductase NP_948128.1 3158421 R 258594 CDS NP_948129.1 39935853 2693512 complement(3159849..3160592) 1 NC_005296.1 hypothetical protein 3160592 2693512 RPA2786 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948129.1 3159849 R 258594 CDS NP_948130.1 39935854 2693160 3160874..3161932 1 NC_005296.1 signal transduction histidine kinase 3161932 2693160 RPA2787 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_948130.1 3160874 D 258594 CDS NP_948131.1 39935855 2693475 complement(3161963..3162709) 1 NC_005296.1 methyltransferase 3162709 2693475 RPA2788 Rhodopseudomonas palustris CGA009 methyltransferase NP_948131.1 3161963 R 258594 CDS NP_948132.1 39935856 2693459 3163151..3166078 1 NC_005296.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 3166078 phaA 2693459 phaA Rhodopseudomonas palustris CGA009 monovalent cation/H+ antiporter subunit A NP_948132.1 3163151 D 258594 CDS NP_948133.1 39935857 2693261 3166069..3166410 1 NC_005296.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 3166410 phaC 2693261 phaC Rhodopseudomonas palustris CGA009 monovalent cation/H+ antiporter subunit C NP_948133.1 3166069 D 258594 CDS NP_948134.1 39935858 2693605 3166407..3168041 1 NC_005296.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 3168041 phaD 2693605 phaD Rhodopseudomonas palustris CGA009 monovalent cation/H+ antiporter subunit D NP_948134.1 3166407 D 258594 CDS NP_948135.1 39935859 2693418 3168038..3168526 1 NC_005296.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 3168526 phaE 2693418 phaE Rhodopseudomonas palustris CGA009 monovalent cation/H+ antiporter subunit E NP_948135.1 3168038 D 258594 CDS NP_948136.1 39935860 2693601 3168523..3168804 1 NC_005296.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit F 3168804 phaF 2693601 phaF Rhodopseudomonas palustris CGA009 monovalent cation/H+ antiporter subunit F NP_948136.1 3168523 D 258594 CDS NP_948137.1 39935861 2693268 3168843..3169172 1 NC_005296.1 Citation: Putkorny et al. (1998) Mol. Microbiol. 28:1091-1101; pH adaptation potassium efflux system component phaG 3169172 phaG 2693268 phaG Rhodopseudomonas palustris CGA009 pH adaptation potassium efflux system component phaG NP_948137.1 3168843 D 258594 CDS NP_948138.1 39935862 2693321 complement(3169197..3169979) 1 NC_005296.1 hypothetical protein 3169979 2693321 RPA2795 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948138.1 3169197 R 258594 CDS NP_948139.1 39935863 2693327 complement(3170000..3171304) 1 NC_005296.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3171304 glyA2 2693327 glyA2 Rhodopseudomonas palustris CGA009 serine hydroxymethyltransferase NP_948139.1 3170000 R 258594 CDS NP_948140.1 39935864 2693201 complement(3171458..3172909) 1 NC_005296.1 Citation: Rossbach et al. (1994) Mol. Gen. Genet. 245:11-24; transcriptional regulator 3172909 2693201 RPA2797 Rhodopseudomonas palustris CGA009 transcriptional regulator NP_948140.1 3171458 R 258594 CDS NP_948141.1 39935865 2693292 3173005..3174288 1 NC_005296.1 benzoate membrane transport protein 3174288 BenE 2693292 BenE Rhodopseudomonas palustris CGA009 benzoate membrane transport protein NP_948141.1 3173005 D 258594 CDS NP_948142.1 39935866 2693295 3174285..3175151 1 NC_005296.1 Citation: Yang et al. (1996) FEMS Microbiol. Lett. 141:89-95; pyridoxamine kinase 3175151 pdxK 2693295 pdxK Rhodopseudomonas palustris CGA009 pyridoxamine kinase NP_948142.1 3174285 D 258594 CDS NP_948143.1 39935867 2693164 complement(3175202..3176011) 1 NC_005296.1 hypothetical protein 3176011 2693164 RPA2800 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948143.1 3175202 R 258594 CDS NP_948144.1 39935868 2693577 complement(3176255..3176752) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; triple helix repeat-containing collagen 3176752 2693577 RPA2801 Rhodopseudomonas palustris CGA009 triple helix repeat-containing collagen NP_948144.1 3176255 R 258594 CDS NP_948145.1 39935869 2693307 3176999..3179062 1 NC_005296.1 UvrD/REP helicase 3179062 2693307 RPA2802 Rhodopseudomonas palustris CGA009 UvrD/REP helicase NP_948145.1 3176999 D 258594 CDS NP_948146.1 39935870 2693497 complement(3179069..3179392) 1 NC_005296.1 hypothetical protein 3179392 2693497 RPA2803 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948146.1 3179069 R 258594 CDS NP_948147.1 39935871 2693258 complement(3179465..3180202) 1 NC_005296.1 hypothetical protein 3180202 2693258 RPA2804 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948147.1 3179465 R 258594 CDS NP_948148.1 39935872 2693440 3180266..3180907 1 NC_005296.1 Citation: Payne et al. (1997) Biochemistry 36:5447-5454; nitrile hydratase subunit alpha 3180907 nthA 2693440 nthA Rhodopseudomonas palustris CGA009 nitrile hydratase subunit alpha NP_948148.1 3180266 D 258594 CDS NP_948149.1 39935873 2693423 3180904..3181560 1 NC_005296.1 Citation: Payne et al. (1997) Biochemistry 36:5447-5454; nitrile hydratase subunit beta 3181560 nthB 2693423 nthB Rhodopseudomonas palustris CGA009 nitrile hydratase subunit beta NP_948149.1 3180904 D 258594 CDS NP_948150.1 39935874 2693411 3181560..3181982 1 NC_005296.1 hypothetical protein 3181982 2693411 RPA2807 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948150.1 3181560 D 258594 CDS NP_948151.1 39935875 2693471 3182106..3183239 1 NC_005296.1 hypothetical protein 3183239 2693471 RPA2808 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948151.1 3182106 D 258594 CDS NP_948152.1 39935876 2693274 complement(3183212..3184504) 1 NC_005296.1 beta-lactamase 3184504 2693274 RPA2809 Rhodopseudomonas palustris CGA009 beta-lactamase NP_948152.1 3183212 R 258594 CDS NP_948153.1 39935877 2693316 complement(3184586..3185299) 1 NC_005296.1 exoenzyme S synthesis protein B 3185299 2693316 RPA2810 Rhodopseudomonas palustris CGA009 exoenzyme S synthesis protein B NP_948153.1 3184586 R 258594 CDS NP_948154.1 39935878 2693610 3185416..3186240 1 NC_005296.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 3186240 mazG 2693610 mazG Rhodopseudomonas palustris CGA009 nucleoside triphosphate pyrophosphohydrolase NP_948154.1 3185416 D 258594 CDS NP_948155.1 39935879 2693324 3186319..3187614 1 NC_005296.1 HlyC/CorC family transporter 3187614 2693324 RPA2812 Rhodopseudomonas palustris CGA009 HlyC/CorC family transporter NP_948155.1 3186319 D 258594 CDS NP_948156.1 39935880 2693400 3187611..3187973 1 NC_005296.1 hypothetical protein 3187973 2693400 RPA2813 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948156.1 3187611 D 258594 CDS NP_948157.1 39935881 2693618 complement(3188088..3188591) 1 NC_005296.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 3188591 ssb 2693618 ssb Rhodopseudomonas palustris CGA009 single-stranded DNA-binding protein NP_948157.1 3188088 R 258594 CDS NP_948158.1 39935882 2693604 3189020..3189886 1 NC_005296.1 hypothetical protein 3189886 2693604 RPA2815 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948158.1 3189020 D 258594 CDS NP_948159.1 39935883 2693561 3190193..3193210 1 NC_005296.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 3193210 uvrA 2693561 uvrA Rhodopseudomonas palustris CGA009 excinuclease ABC subunit A NP_948159.1 3190193 D 258594 CDS NP_948160.1 39935884 2693163 complement(3193267..3194052) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3194052 2693163 RPA2817 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948160.1 3193267 R 258594 CDS NP_948161.1 39935885 2693256 3194397..3194771 1 NC_005296.1 hypothetical protein 3194771 2693256 RPA2818 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948161.1 3194397 D 258594 CDS NP_948162.1 39935886 2693532 complement(3194789..3195151) 1 NC_005296.1 hypothetical protein 3195151 2693532 RPA2819 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948162.1 3194789 R 258594 CDS NP_948163.1 39935887 2693521 complement(3195154..3195492) 1 NC_005296.1 hypothetical protein 3195492 2693521 RPA2820 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948163.1 3195154 R 258594 CDS NP_948164.1 39935888 2693319 3195528..3196304 1 NC_005296.1 ion transporter 3196304 2693319 RPA2821 Rhodopseudomonas palustris CGA009 ion transporter NP_948164.1 3195528 D 258594 CDS NP_948165.1 39935889 2693409 3196342..3196896 1 NC_005296.1 hypothetical protein 3196896 2693409 RPA2822 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948165.1 3196342 D 258594 CDS NP_948166.1 39935890 2693424 3197176..3197466 1 NC_005296.1 hypothetical protein 3197466 2693424 RPA2823 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948166.1 3197176 D 258594 CDS NP_948167.1 39935891 2693428 3197599..3198006 1 NC_005296.1 thioesterase 3198006 2693428 RPA2824 Rhodopseudomonas palustris CGA009 thioesterase NP_948167.1 3197599 D 258594 CDS NP_948168.1 39935892 2693417 complement(3198306..3198698) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3198698 2693417 RPA2825 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948168.1 3198306 R 258594 CDS NP_948169.1 39935893 2693279 3199080..3199976 1 NC_005296.1 hypothetical protein 3199976 2693279 RPA2826 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948169.1 3199080 D 258594 CDS NP_948170.1 39935894 2693574 3200764..3202200 1 NC_005296.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 3202200 gid 2693574 gid Rhodopseudomonas palustris CGA009 tRNA (uracil-5-)-methyltransferase Gid NP_948170.1 3200764 D 258594 CDS NP_948171.1 39935895 2693254 complement(3202230..3203102) 1 NC_005296.1 phytoene synthase 3203102 2693254 RPA2828 Rhodopseudomonas palustris CGA009 phytoene synthase NP_948171.1 3202230 R 258594 CDS NP_948172.1 39935896 2693597 complement(3203099..3203482) 1 NC_005296.1 hypothetical protein 3203482 2693597 RPA2829 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948172.1 3203099 R 258594 CDS NP_948173.1 39935897 2693203 complement(3203644..3204762) 1 NC_005296.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3204762 secF 2693203 secF Rhodopseudomonas palustris CGA009 preprotein translocase subunit SecF NP_948173.1 3203644 R 258594 CDS NP_948174.1 39935898 2693179 complement(3204788..3206389) 1 NC_005296.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3206389 secD 2693179 secD Rhodopseudomonas palustris CGA009 preprotein translocase subunit SecD NP_948174.1 3204788 R 258594 CDS NP_948175.1 39935899 2693224 complement(3206434..3206871) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; preprotein translocase subunit YajC 3206871 yajC 2693224 yajC Rhodopseudomonas palustris CGA009 preprotein translocase subunit YajC NP_948175.1 3206434 R 258594 CDS NP_948176.1 39935900 2693225 3207035..3208051 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3208051 2693225 RPA2833 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948176.1 3207035 D 258594 CDS NP_948177.1 39935901 2693192 3208220..3209920 1 NC_005296.1 hypothetical protein 3209920 2693192 RPA2834 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948177.1 3208220 D 258594 CDS NP_948178.1 39935902 2693167 complement(3209967..3210767) 1 NC_005296.1 hypothetical protein 3210767 2693167 RPA2835 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948178.1 3209967 R 258594 CDS NP_948179.1 39935903 2693195 3211602..3212495 1 NC_005296.1 hydrolase 3212495 2693195 RPA2836 Rhodopseudomonas palustris CGA009 hydrolase NP_948179.1 3211602 D 258594 CDS NP_948180.1 39935904 2693180 complement(3212596..3214011) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase M23B 3214011 lppB 2693180 lppB Rhodopseudomonas palustris CGA009 peptidase M23B NP_948180.1 3212596 R 258594 CDS NP_948181.1 39935905 2693171 complement(3214132..3214785) 1 NC_005296.1 protein-L-isoaspartate O-methyltransferase 3214785 pimt2 2693171 pimt2 Rhodopseudomonas palustris CGA009 protein-L-isoaspartate O-methyltransferase NP_948181.1 3214132 R 258594 CDS NP_948182.1 39935906 2693223 3215009..3215383 1 NC_005296.1 chemotaxis protein CheY 3215383 2693223 RPA2839 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_948182.1 3215009 D 258594 CDS NP_948183.1 39935907 2693172 complement(3215392..3215919) 1 NC_005296.1 hypothetical protein 3215919 2693172 RPA2840 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948183.1 3215392 R 258594 CDS NP_948184.1 39935908 2693191 complement(3216132..3216899) 1 NC_005296.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 3216899 surE 2693191 surE Rhodopseudomonas palustris CGA009 stationary phase survival protein SurE NP_948184.1 3216132 R 258594 CDS NP_948185.1 39935909 2693197 complement(3219531..3220202) 1 NC_005296.1 SCP-like extracellular protein 3220202 2693197 RPA2844 Rhodopseudomonas palustris CGA009 SCP-like extracellular protein NP_948185.1 3219531 R 258594 CDS NP_948186.1 39935910 2693206 complement(3220208..3221512) 1 NC_005296.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 3221512 serS 2693206 serS Rhodopseudomonas palustris CGA009 seryl-tRNA synthetase NP_948186.1 3220208 R 258594 CDS NP_948187.1 39935911 2693194 complement(3221637..3221942) 1 NC_005296.1 hypothetical protein 3221942 2693194 RPA2846 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948187.1 3221637 R 258594 CDS NP_948188.1 39935912 2693599 complement(3222083..3222898) 1 NC_005296.1 Sec-independent protein translocase TatC 3222898 tatC 2693599 tatC Rhodopseudomonas palustris CGA009 Sec-independent protein translocase TatC NP_948188.1 3222083 R 258594 CDS NP_948189.1 39935913 2693553 complement(3222895..3223404) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; twin-arginine translocation protein TatB 3223404 tatB 2693553 tatB Rhodopseudomonas palustris CGA009 twin-arginine translocation protein TatB NP_948189.1 3222895 R 258594 CDS NP_948190.1 39935914 2693563 complement(3223621..3223857) 1 NC_005296.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin-arginine translocation protein TatA 3223857 tatA 2693563 tatA Rhodopseudomonas palustris CGA009 twin-arginine translocation protein TatA NP_948190.1 3223621 R 258594 CDS NP_948191.1 39935915 2693517 complement(3224004..3225302) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3225302 2693517 RPA2850 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948191.1 3224004 R 258594 CDS NP_948192.1 39935916 2693537 complement(3225323..3226156) 1 NC_005296.1 chromosome segregation and condensation protein ScpA 3226156 2693537 RPA2851 Rhodopseudomonas palustris CGA009 chromosome segregation and condensation protein ScpA NP_948192.1 3225323 R 258594 CDS NP_948193.1 39935917 2693524 complement(3226153..3227178) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-N-acetylhexosaminidase 3227178 2693524 RPA2852 Rhodopseudomonas palustris CGA009 beta-N-acetylhexosaminidase NP_948193.1 3226153 R 258594 CDS NP_948194.1 39935918 2693496 complement(3227227..3228849) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3228849 2693496 RPA2853 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948194.1 3227227 R 258594 CDS NP_948195.1 39935919 2693472 complement(3228952..3230745) 1 NC_005296.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 3230745 argS 2693472 argS Rhodopseudomonas palustris CGA009 arginyl-tRNA synthetase NP_948195.1 3228952 R 258594 CDS NP_948196.1 39935920 2693445 complement(3230797..3232011) 1 NC_005296.1 deoxyguanosinetriphosphate triphosphohydrolase 3232011 2693445 RPA2855 Rhodopseudomonas palustris CGA009 deoxyguanosinetriphosphate triphosphohydrolase NP_948196.1 3230797 R 258594 CDS NP_948197.1 39935921 2693385 3232118..3232450 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; HesB/YadR/YfhF 3232450 2693385 RPA2856 Rhodopseudomonas palustris CGA009 HesB/YadR/YfhF NP_948197.1 3232118 D 258594 CDS NP_948198.1 39935922 2693228 3232645..3233694 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3233694 2693228 RPA2857 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948198.1 3232645 D 258594 CDS NP_948199.1 39935923 2693334 3233691..3234755 1 NC_005296.1 hypothetical protein 3234755 2693334 RPA2858 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948199.1 3233691 D 258594 CDS NP_948200.1 39935924 2693326 complement(3234782..3235519) 1 NC_005296.1 hypothetical protein 3235519 2693326 RPA2859 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948200.1 3234782 R 258594 CDS NP_948201.1 39935925 2693168 complement(3235643..3236602) 1 NC_005296.1 hypothetical protein 3236602 2693168 RPA2860 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948201.1 3235643 R 258594 CDS NP_948202.1 39935926 2693237 3237166..3238077 1 NC_005296.1 exodeoxyribonuclease III 3238077 xthA2 2693237 xthA2 Rhodopseudomonas palustris CGA009 exodeoxyribonuclease III NP_948202.1 3237166 D 258594 CDS NP_948203.1 39935927 2693215 complement(3238277..3239098) 1 NC_005296.1 exopolysaccharide regulatory protein exoR 3239098 exoR 2693215 exoR Rhodopseudomonas palustris CGA009 exopolysaccharide regulatory protein exoR NP_948203.1 3238277 R 258594 CDS NP_948204.1 39935928 2693154 complement(3239761..3241182) 1 NC_005296.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3241182 2693154 RPA2863 Rhodopseudomonas palustris CGA009 dihydrolipoamide dehydrogenase NP_948204.1 3239761 R 258594 CDS NP_948205.1 39935929 2693416 complement(3241258..3242649) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain alpha-keto acid dehydrogenase subunit E2 3242649 2693416 RPA2864 Rhodopseudomonas palustris CGA009 branched-chain alpha-keto acid dehydrogenase subunit E2 NP_948205.1 3241258 R 258594 CDS NP_948206.1 39935930 2693166 complement(3242662..3242958) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3242958 2693166 RPA2865 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948206.1 3242662 R 258594 CDS NP_948207.1 39935931 2693403 complement(3242963..3244372) 1 NC_005296.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 3244372 2693403 RPA2866 Rhodopseudomonas palustris CGA009 pyruvate dehydrogenase subunit beta NP_948207.1 3242963 R 258594 CDS NP_948208.1 39935932 2693412 complement(3244431..3245465) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pyruvate dehydrogenase E1 subunit alpha 3245465 2693412 RPA2867 Rhodopseudomonas palustris CGA009 pyruvate dehydrogenase E1 subunit alpha NP_948208.1 3244431 R 258594 CDS NP_948209.1 39935933 2693422 complement(3245618..3245935) 1 NC_005296.1 septum formation initiator 3245935 2693422 RPA2868 Rhodopseudomonas palustris CGA009 septum formation initiator NP_948209.1 3245618 R 258594 CDS NP_948210.1 39935934 2689530 complement(3246024..3246584) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; flavin-dependent oxidoreductase 3246584 2689530 RPA2869 Rhodopseudomonas palustris CGA009 flavin-dependent oxidoreductase NP_948210.1 3246024 R 258594 CDS NP_948211.1 39935935 2693622 complement(3246724..3247866) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; L-carnitine dehydratase/bile acid-inducible protein F 3247866 2693622 RPA2870 Rhodopseudomonas palustris CGA009 L-carnitine dehydratase/bile acid-inducible protein F NP_948211.1 3246724 R 258594 CDS NP_948212.1 39935936 2689941 3247959..3248573 1 NC_005296.1 RhtB family amino acid efflux protein 3248573 2689941 RPA2871 Rhodopseudomonas palustris CGA009 RhtB family amino acid efflux protein NP_948212.1 3247959 D 258594 CDS NP_948213.1 39935937 2689432 complement(3248725..3249528) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3249528 2689432 RPA2872 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948213.1 3248725 R 258594 CDS NP_948214.1 39935938 2689293 complement(3249613..3250746) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NADH oxidoreductase 3250746 2689293 RPA2873 Rhodopseudomonas palustris CGA009 NADH oxidoreductase NP_948214.1 3249613 R 258594 CDS NP_948215.1 39935939 2689265 complement(3250857..3252140) 1 NC_005296.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 3252140 eno 2689265 eno Rhodopseudomonas palustris CGA009 phosphopyruvate hydratase NP_948215.1 3250857 R 258594 CDS NP_948216.1 39935940 2688791 3252326..3252802 1 NC_005296.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3252802 2688791 RPA2875 Rhodopseudomonas palustris CGA009 7-cyano-7-deazaguanine reductase NP_948216.1 3252326 D 258594 CDS NP_948217.1 39935941 2690426 3253245..3254750 1 NC_005296.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 3254750 mdoG 2690426 mdoG Rhodopseudomonas palustris CGA009 glucan biosynthesis protein G NP_948217.1 3253245 D 258594 CDS NP_948218.1 39935942 2692398 3254738..3256903 1 NC_005296.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 3256903 2692398 RPA2877 Rhodopseudomonas palustris CGA009 glucosyltransferase MdoH NP_948218.1 3254738 D 258594 CDS NP_948219.1 39935943 2690815 complement(3256900..3258126) 1 NC_005296.1 MDR-like permease 3258126 2690815 RPA2878 Rhodopseudomonas palustris CGA009 MDR-like permease NP_948219.1 3256900 R 258594 CDS NP_948220.1 39935944 2690392 complement(3258126..3258989) 1 NC_005296.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3258989 kdsA 2690392 kdsA Rhodopseudomonas palustris CGA009 2-dehydro-3-deoxyphosphooctonate aldolase NP_948220.1 3258126 R 258594 CDS NP_948221.1 39935945 2692166 complement(3258986..3259906) 1 NC_005296.1 hypothetical protein 3259906 2692166 RPA2880 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948221.1 3258986 R 258594 CDS NP_948222.1 39935946 2692537 complement(3260002..3260532) 1 NC_005296.1 hypothetical protein 3260532 2692537 RPA2881 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948222.1 3260002 R 258594 CDS NP_948223.1 39935947 2692094 3260682..3260957 1 NC_005296.1 hypothetical protein 3260957 2692094 RPA2882 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948223.1 3260682 D 258594 CDS NP_948224.1 39935948 2688747 complement(3260992..3261849) 1 NC_005296.1 hypothetical protein 3261849 2688747 RPA2883 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948224.1 3260992 R 258594 CDS NP_948225.1 39935949 2692046 3261980..3262357 1 NC_005296.1 hypothetical protein 3262357 2692046 RPA2884 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948225.1 3261980 D 258594 CDS NP_948226.1 39935950 2691972 3262467..3262613 1 NC_005296.1 hypothetical protein 3262613 2691972 RPA2885 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948226.1 3262467 D 258594 CDS NP_948227.1 39935951 2690596 complement(3262627..3264258) 1 NC_005296.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3264258 pyrG 2690596 pyrG Rhodopseudomonas palustris CGA009 CTP synthetase NP_948227.1 3262627 R 258594 CDS NP_948228.1 39935952 2690310 complement(3264425..3264829) 1 NC_005296.1 preprotein translocase subunit SecG 3264829 secG 2690310 secG Rhodopseudomonas palustris CGA009 preprotein translocase subunit SecG NP_948228.1 3264425 R 258594 CDS NP_948229.1 39935953 2691861 complement(3265005..3265841) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; triose-phosphate isomerase 3265841 cbbJ 2691861 cbbJ Rhodopseudomonas palustris CGA009 triose-phosphate isomerase NP_948229.1 3265005 R 258594 CDS NP_948230.1 39935954 2689153 3266039..3267940 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; PpiC-type peptidyl-prolyl cis-trans isomerase 3267940 2689153 RPA2889 Rhodopseudomonas palustris CGA009 PpiC-type peptidyl-prolyl cis-trans isomerase NP_948230.1 3266039 D 258594 CDS NP_948231.1 39935955 2689375 3267977..3268993 1 NC_005296.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 3268993 trpD 2689375 trpD Rhodopseudomonas palustris CGA009 anthranilate phosphoribosyltransferase NP_948231.1 3267977 D 258594 CDS NP_948232.1 39935956 2690194 3269058..3269921 1 NC_005296.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase 3269921 trpC 2690194 trpC Rhodopseudomonas palustris CGA009 indole-3-glycerol phosphate synthase NP_948232.1 3269058 D 258594 CDS NP_948233.1 39935957 2689838 3269932..3270462 1 NC_005296.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 3270462 moaC 2689838 moaC Rhodopseudomonas palustris CGA009 molybdenum cofactor biosynthesis protein MoaC NP_948233.1 3269932 D 258594 CDS NP_948234.1 39935958 2690147 3270500..3273058 1 NC_005296.1 ATPase E1-E2 type 3273058 2690147 RPA2893 Rhodopseudomonas palustris CGA009 ATPase E1-E2 type NP_948234.1 3270500 D 258594 CDS NP_948235.1 39935959 2691190 complement(3273186..3273662) 1 NC_005296.1 hypothetical protein 3273662 2691190 RPA2894 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948235.1 3273186 R 258594 CDS NP_948236.1 39935960 2691061 3273901..3274401 1 NC_005296.1 small heat shock protein 3274401 2691061 RPA2895 Rhodopseudomonas palustris CGA009 small heat shock protein NP_948236.1 3273901 D 258594 CDS NP_948237.1 39935961 2693044 3274570..3274818 1 NC_005296.1 hypothetical protein 3274818 2693044 RPA2896 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948237.1 3274570 D 258594 CDS NP_948238.1 39935962 2690454 complement(3274858..3275838) 1 NC_005296.1 chemotaxis protein MotB2 3275838 motB2 2690454 motB2 Rhodopseudomonas palustris CGA009 chemotaxis protein MotB2 NP_948238.1 3274858 R 258594 CDS NP_948239.1 39935963 2692774 3275975..3276601 1 NC_005296.1 haloacid dehalogenase 3276601 2692774 RPA2898 Rhodopseudomonas palustris CGA009 haloacid dehalogenase NP_948239.1 3275975 D 258594 CDS NP_948240.1 39935964 2692859 3276632..3277120 1 NC_005296.1 hypothetical protein 3277120 2692859 RPA2899 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948240.1 3276632 D 258594 CDS NP_948241.1 39935965 2692654 3277268..3277681 1 NC_005296.1 rifampin ADP-ribosyl transferase 3277681 2692654 RPA2900 Rhodopseudomonas palustris CGA009 rifampin ADP-ribosyl transferase NP_948241.1 3277268 D 258594 CDS NP_948242.1 39935966 2692579 complement(3277725..3278066) 1 NC_005296.1 hypothetical protein 3278066 2692579 RPA2901 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948242.1 3277725 R 258594 CDS NP_948243.1 39935967 2690938 3278266..3279477 1 NC_005296.1 molybdenum cofactor biosynthesis protein A 3279477 moeA 2690938 moeA Rhodopseudomonas palustris CGA009 molybdenum cofactor biosynthesis protein A NP_948243.1 3278266 D 258594 CDS NP_948244.1 39935968 2690942 3279537..3280364 1 NC_005296.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 3280364 lexA 2690942 lexA Rhodopseudomonas palustris CGA009 LexA repressor NP_948244.1 3279537 D 258594 CDS NP_948245.1 39935969 2691595 complement(3280435..3282702) 1 NC_005296.1 ComEC/Rec2-like protein 3282702 2691595 RPA2904 Rhodopseudomonas palustris CGA009 ComEC/Rec2-like protein NP_948245.1 3280435 R 258594 CDS NP_948246.1 39935970 2692642 complement(3282795..3284477) 1 NC_005296.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 3284477 glnS 2692642 glnS Rhodopseudomonas palustris CGA009 glutaminyl-tRNA synthetase NP_948246.1 3282795 R 258594 CDS NP_948247.1 39935971 2692777 3284639..3286060 1 NC_005296.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3286060 gltX 2692777 gltX Rhodopseudomonas palustris CGA009 glutamyl-tRNA synthetase NP_948247.1 3284639 D 258594 CDS NP_948248.1 39935972 2690448 3286211..3287515 1 NC_005296.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 3287515 gltA 2690448 gltA Rhodopseudomonas palustris CGA009 type II citrate synthase NP_948248.1 3286211 D 258594 CDS NP_948249.1 39935973 2691065 complement(3287610..3288254) 1 NC_005296.1 cytidine/deoxycytidylate deaminase 3288254 2691065 RPA2908 Rhodopseudomonas palustris CGA009 cytidine/deoxycytidylate deaminase NP_948249.1 3287610 R 258594 CDS NP_948250.1 39935974 2691083 complement(3288404..3289585) 1 NC_005296.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 3289585 lpxB 2691083 lpxB Rhodopseudomonas palustris CGA009 lipid-A-disaccharide synthase NP_948250.1 3288404 R 258594 CDS NP_948251.1 39935975 2690060 complement(3289582..3290439) 1 NC_005296.1 hypothetical protein 3290439 2690060 RPA2910 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948251.1 3289582 R 258594 CDS NP_948252.1 39935976 2690058 complement(3290458..3291300) 1 NC_005296.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 3291300 lpxA 2690058 lpxA Rhodopseudomonas palustris CGA009 UDP-N-acetylglucosamine acyltransferase NP_948252.1 3290458 R 258594 CDS NP_948253.1 39935977 2690250 complement(3291309..3291764) 1 NC_005296.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3291764 fabZ 2690250 fabZ Rhodopseudomonas palustris CGA009 (3R)-hydroxymyristoyl-ACP dehydratase NP_948253.1 3291309 R 258594 CDS NP_948254.1 39935978 2691714 complement(3291764..3292846) 1 NC_005296.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3292846 lpxD 2691714 lpxD Rhodopseudomonas palustris CGA009 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase NP_948254.1 3291764 R 258594 CDS NP_948255.1 39935979 2691777 complement(3292876..3295401) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane protein 3295401 2691777 RPA2914 Rhodopseudomonas palustris CGA009 outer membrane protein NP_948255.1 3292876 R 258594 CDS NP_948256.1 39935980 2689383 complement(3295574..3296725) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase M50, membrane-associated zinc metallopeptidase 3296725 2689383 RPA2915 Rhodopseudomonas palustris CGA009 peptidase M50, membrane-associated zinc metallopeptidase NP_948256.1 3295574 R 258594 CDS NP_948257.1 39935981 2690571 complement(3296771..3297994) 1 NC_005296.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3297994 dxr 2690571 dxr Rhodopseudomonas palustris CGA009 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP_948257.1 3296771 R 258594 CDS NP_948258.1 39935982 2690655 complement(3297999..3298847) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphatidate cytidylyltransferase 3298847 cdsA 2690655 cdsA Rhodopseudomonas palustris CGA009 phosphatidate cytidylyltransferase NP_948258.1 3297999 R 258594 CDS NP_948259.1 39935983 2692132 complement(3298853..3299611) 1 NC_005296.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 3299611 uppS 2692132 uppS Rhodopseudomonas palustris CGA009 undecaprenyl pyrophosphate synthase NP_948259.1 3298853 R 258594 CDS NP_948260.1 39935984 2690705 complement(3299823..3300383) 1 NC_005296.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 3300383 frr 2690705 frr Rhodopseudomonas palustris CGA009 ribosome recycling factor NP_948260.1 3299823 R 258594 CDS NP_948261.1 39935985 2689565 complement(3300449..3301165) 1 NC_005296.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 3301165 pyrH 2689565 pyrH Rhodopseudomonas palustris CGA009 uridylate kinase NP_948261.1 3300449 R 258594 CDS NP_948262.1 39935986 2692290 complement(3301233..3302159) 1 NC_005296.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 3302159 tsf 2692290 tsf Rhodopseudomonas palustris CGA009 elongation factor Ts NP_948262.1 3301233 R 258594 CDS NP_948263.1 39935987 2692242 complement(3302284..3303279) 1 NC_005296.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 3303279 rpsB 2692242 rpsB Rhodopseudomonas palustris CGA009 30S ribosomal protein S2 NP_948263.1 3302284 R 258594 CDS NP_948264.1 39935988 2689979 complement(3303514..3306003) 1 NC_005296.1 hypothetical protein 3306003 2689979 RPA2923 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948264.1 3303514 R 258594 CDS NP_948265.1 39935989 2690853 complement(3306165..3309620) 1 NC_005296.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 3309620 dnaE 2690853 dnaE Rhodopseudomonas palustris CGA009 DNA polymerase III subunit alpha NP_948265.1 3306165 R 258594 CDS NP_948266.1 39935990 2689949 3310205..3310714 1 NC_005296.1 hypothetical protein 3310714 2689949 RPA2925 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948266.1 3310205 D 258594 CDS NP_948267.1 39935991 2689975 complement(3310911..3311609) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; lipoprotein ABC transporter ATP-binding protein 3311609 2689975 RPA2926 Rhodopseudomonas palustris CGA009 lipoprotein ABC transporter ATP-binding protein NP_948267.1 3310911 R 258594 CDS NP_948268.1 39935992 2689537 complement(3311621..3312901) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; lipoprotein releasing system transmembrane protein LolC/E family 3312901 2689537 RPA2927 Rhodopseudomonas palustris CGA009 lipoprotein releasing system transmembrane protein LolC/E family NP_948268.1 3311621 R 258594 CDS NP_948269.1 39935993 2688742 complement(3312981..3314297) 1 NC_005296.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3314297 proS 2688742 proS Rhodopseudomonas palustris CGA009 prolyl-tRNA synthetase NP_948269.1 3312981 R 258594 CDS NP_948270.1 39935994 2688830 complement(3314473..3316053) 1 NC_005296.1 hypothetical protein 3316053 2688830 RPA2929 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948270.1 3314473 R 258594 CDS NP_948271.1 39935995 2692464 complement(3316071..3316598) 1 NC_005296.1 hypothetical protein 3316598 2692464 RPA2930 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948271.1 3316071 R 258594 CDS NP_948272.1 39935996 2690906 complement(3316598..3317137) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3317137 2690906 RPA2931 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948272.1 3316598 R 258594 CDS NP_948273.1 39935997 2689745 complement(3317263..3317679) 1 NC_005296.1 hypothetical protein 3317679 2689745 RPA2932 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948273.1 3317263 R 258594 CDS NP_948274.1 39935998 2692390 complement(3318298..3318579) 1 NC_005296.1 hypothetical protein 3318579 2692390 RPA2933 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948274.1 3318298 R 258594 CDS NP_948275.1 39935999 2690852 complement(3318583..3318987) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glyoxalase/bleomycin resistance protein/dioxygenase 3318987 2690852 RPA2934 Rhodopseudomonas palustris CGA009 glyoxalase/bleomycin resistance protein/dioxygenase NP_948275.1 3318583 R 258594 CDS NP_948276.1 39936000 2690865 complement(3319029..3320699) 1 NC_005296.1 beta-lactamase-like protein 3320699 2690865 RPA2935 Rhodopseudomonas palustris CGA009 beta-lactamase-like protein NP_948276.1 3319029 R 258594 CDS NP_948277.1 39936001 2692381 complement(3320699..3321505) 1 NC_005296.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--acetyl-CoA-carboxylase ligase 3321505 birA 2692381 birA Rhodopseudomonas palustris CGA009 biotin--acetyl-CoA-carboxylase ligase NP_948277.1 3320699 R 258594 CDS NP_948278.1 39936002 2692357 complement(3321506..3322945) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 3322945 nuoN1 2692357 nuoN1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit N NP_948278.1 3321506 R 258594 CDS NP_948279.1 39936003 2692315 complement(3322965..3324482) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 3324482 nuoM1 2692315 nuoM1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit M NP_948279.1 3322965 R 258594 CDS NP_948280.1 39936004 2690806 complement(3324483..3326576) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 3326576 nuoL1 2690806 nuoL1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit L NP_948280.1 3324483 R 258594 CDS NP_948281.1 39936005 2692264 complement(3326636..3326947) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 3326947 nuoK1 2692264 nuoK1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit K NP_948281.1 3326636 R 258594 CDS NP_948282.1 39936006 2690388 complement(3326944..3327582) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 3327582 nuoJ1 2690388 nuoJ1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit J NP_948282.1 3326944 R 258594 CDS NP_948283.1 39936007 2692176 complement(3327592..3328080) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 3328080 nuoI1 2692176 nuoI1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit I NP_948283.1 3327592 R 258594 CDS NP_948284.1 39936008 2689947 complement(3328088..3329113) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 3329113 nuoH1 2689947 nuoH1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit H NP_948284.1 3328088 R 258594 CDS NP_948285.1 39936009 2690732 complement(3329123..3331207) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 3331207 nuoG1 2690732 nuoG1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit G NP_948285.1 3329123 R 258594 CDS NP_948286.1 39936010 2692110 complement(3331204..3332529) 1 NC_005296.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 3332529 nuoF1 2692110 nuoF1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase I subunit F NP_948286.1 3331204 R 258594 CDS NP_948287.1 39936011 2690722 complement(3332548..3332763) 1 NC_005296.1 hypothetical protein 3332763 2690722 RPA2946 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948287.1 3332548 R 258594 CDS NP_948288.1 39936012 2689567 complement(3332760..3333509) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 3333509 nuoE1 2689567 nuoE1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit E NP_948288.1 3332760 R 258594 CDS NP_948289.1 39936013 2689963 complement(3333512..3334483) 1 NC_005296.1 FkbM family methyltransferase 3334483 fkbM 2689963 fkbM Rhodopseudomonas palustris CGA009 FkbM family methyltransferase NP_948289.1 3333512 R 258594 CDS NP_948290.1 39936014 2689734 complement(3334480..3335688) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 3335688 nuoD 2689734 nuoD Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit D NP_948290.1 3334480 R 258594 CDS NP_948291.1 39936015 2692062 complement(3335740..3336354) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 3336354 nuoC 2692062 nuoC Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit C NP_948291.1 3335740 R 258594 CDS NP_948292.1 39936016 2692093 complement(3336368..3336964) 1 NC_005296.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3336964 nuoB1 2692093 nuoB1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit B NP_948292.1 3336368 R 258594 CDS NP_948293.1 39936017 2689548 complement(3336976..3337341) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 3337341 nuoA1 2689548 nuoA1 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit A NP_948293.1 3336976 R 258594 CDS NP_948294.1 39936018 2688753 3338656..3338967 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DNA-binding protein HU-alpha 3338967 hupA 2688753 hupA Rhodopseudomonas palustris CGA009 DNA-binding protein HU-alpha NP_948294.1 3338656 D 258594 CDS NP_948295.1 39936019 2689004 3339219..3340517 1 NC_005296.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3340517 pepT 2689004 pepT Rhodopseudomonas palustris CGA009 peptidase T NP_948295.1 3339219 D 258594 CDS NP_948296.1 39936020 2692518 3340667..3341911 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; RND efflux membrane fusion protein 3341911 mex 2692518 mex Rhodopseudomonas palustris CGA009 RND efflux membrane fusion protein NP_948296.1 3340667 D 258594 CDS NP_948297.1 39936021 2690671 3341940..3345080 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; RND multidrug efflux transporter MexF 3345080 mexF 2690671 mexF Rhodopseudomonas palustris CGA009 RND multidrug efflux transporter MexF NP_948297.1 3341940 D 258594 CDS NP_948298.1 39936022 2692018 3345579..3348227 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 3348227 2692018 RPA2957 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_948298.1 3345579 D 258594 CDS NP_948299.1 39936023 2691981 complement(3348336..3349376) 1 NC_005296.1 DNA-binding protein 3349376 2691981 RPA2958 Rhodopseudomonas palustris CGA009 DNA-binding protein NP_948299.1 3348336 R 258594 CDS NP_948300.1 39936024 2692003 complement(3349571..3352003) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ATP-dependent protease La 3352003 lon 2692003 lon Rhodopseudomonas palustris CGA009 ATP-dependent protease La NP_948300.1 3349571 R 258594 CDS NP_948301.1 39936025 2690351 complement(3352313..3353587) 1 NC_005296.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 3353587 clpX 2690351 clpX Rhodopseudomonas palustris CGA009 ATP-dependent protease ATP-binding subunit ClpX NP_948301.1 3352313 R 258594 CDS NP_948302.1 39936026 2690355 complement(3353980..3354618) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; endopeptidase Clp 3354618 clpP 2690355 clpP Rhodopseudomonas palustris CGA009 endopeptidase Clp NP_948302.1 3353980 R 258594 CDS NP_948303.1 39936027 2690550 complement(3354932..3356290) 1 NC_005296.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 3356290 tig 2690550 tig Rhodopseudomonas palustris CGA009 trigger factor NP_948303.1 3354932 R 258594 CDS NP_948304.1 39936028 2690284 complement(3356681..3357154) 1 NC_005296.1 hypothetical protein 3357154 2690284 RPA2963 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948304.1 3356681 R 258594 CDS NP_948305.1 39936029 2690520 3357277..3358482 1 NC_005296.1 multicopper oxidase type 1 3358482 2690520 RPA2964 Rhodopseudomonas palustris CGA009 multicopper oxidase type 1 NP_948305.1 3357277 D 258594 CDS NP_948306.1 39936030 2691876 complement(3358531..3360030) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3360030 yjeF 2691876 yjeF Rhodopseudomonas palustris CGA009 hypothetical protein NP_948306.1 3358531 R 258594 CDS NP_948307.1 39936031 2689388 3360442..3360780 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitrogen regulatory protein P-II 3360780 glnB 2689388 glnB Rhodopseudomonas palustris CGA009 nitrogen regulatory protein P-II NP_948307.1 3360442 D 258594 CDS NP_948308.1 39936032 2692522 3360870..3362279 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutamine synthetase type I 3362279 glnA 2692522 glnA Rhodopseudomonas palustris CGA009 glutamine synthetase type I NP_948308.1 3360870 D 258594 CDS NP_948309.1 39936033 2690513 3362578..3363327 1 NC_005296.1 TetR family transcriptional regulator 3363327 2690513 RPA2968 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_948309.1 3362578 D 258594 CDS NP_948310.1 39936034 2691860 3363340..3363951 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3363951 2691860 RPA2969 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948310.1 3363340 D 258594 CDS NP_948311.1 39936035 2692512 complement(3364094..3365371) 1 NC_005296.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3365371 bioA 2692512 bioA Rhodopseudomonas palustris CGA009 adenosylmethionine-8-amino-7-oxononanoate aminotransferase NP_948311.1 3364094 R 258594 CDS NP_948312.1 39936036 2691795 complement(3365368..3366006) 1 NC_005296.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 3366006 bioD 2691795 bioD Rhodopseudomonas palustris CGA009 dithiobiotin synthetase NP_948312.1 3365368 R 258594 CDS NP_948313.1 39936037 2691748 complement(3366003..3367133) 1 NC_005296.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 3367133 bioF 2691748 bioF Rhodopseudomonas palustris CGA009 8-amino-7-oxononanoate synthase NP_948313.1 3366003 R 258594 CDS NP_948314.1 39936038 2692494 complement(3367274..3367837) 1 NC_005296.1 hypothetical protein 3367837 2692494 RPA2973 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948314.1 3367274 R 258594 CDS NP_948315.1 39936039 2691719 complement(3367926..3369356) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 6-aminohexanoate-cyclic-dimer hydrolase 3369356 2691719 RPA2974 Rhodopseudomonas palustris CGA009 6-aminohexanoate-cyclic-dimer hydrolase NP_948315.1 3367926 R 258594 CDS NP_948316.1 39936040 2691275 complement(3369556..3370545) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphoglycerate dehydrogenase 3370545 serA1 2691275 serA1 Rhodopseudomonas palustris CGA009 phosphoglycerate dehydrogenase NP_948316.1 3369556 R 258594 CDS NP_948317.1 39936041 2689889 complement(3370654..3371553) 1 NC_005296.1 DMT family permease 3371553 2689889 RPA2976 Rhodopseudomonas palustris CGA009 DMT family permease NP_948317.1 3370654 R 258594 CDS NP_948318.1 39936042 2689910 3372218..3375991 1 NC_005296.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3375991 nrd 2689910 nrd Rhodopseudomonas palustris CGA009 ribonucleotide-diphosphate reductase subunit alpha NP_948318.1 3372218 D 258594 CDS NP_948319.1 39936043 2690217 3376115..3377209 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3377209 2690217 RPA2978 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948319.1 3376115 D 258594 CDS NP_948320.1 39936044 2690206 3377373..3377621 1 NC_005296.1 hypothetical protein 3377621 2690206 RPA2979 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948320.1 3377373 D 258594 CDS NP_948321.1 39936045 2690197 complement(3377728..3378324) 1 NC_005296.1 integrase 3378324 2690197 RPA2980 Rhodopseudomonas palustris CGA009 integrase NP_948321.1 3377728 R 258594 CDS NP_948322.1 39936046 2690113 complement(3378321..3378647) 1 NC_005296.1 P2 ISBm2 3378647 2690113 RPA2981 Rhodopseudomonas palustris CGA009 P2 ISBm2 NP_948322.1 3378321 R 258594 CDS NP_948323.1 39936047 2690140 complement(3378641..3378907) 1 NC_005296.1 hypothetical protein 3378907 2690140 RPA2982 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948323.1 3378641 R 258594 CDS NP_948324.1 39936048 2690162 3379718..3380197 1 NC_005296.1 hypothetical protein 3380197 2690162 RPA2983 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948324.1 3379718 D 258594 CDS NP_948325.1 39936049 2689936 complement(3380294..3381445) 1 NC_005296.1 diguanylate cyclase 3381445 2689936 RPA2984 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_948325.1 3380294 R 258594 CDS NP_948326.1 39936050 2691215 3381693..3382379 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3382379 2691215 RPA2985 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948326.1 3381693 D 258594 CDS NP_948327.1 39936051 2691250 complement(3383055..3383399) 1 NC_005296.1 5-carboxymethyl-2-hydroxymuconate delta-isomerase 3383399 2691250 RPA2986 Rhodopseudomonas palustris CGA009 5-carboxymethyl-2-hydroxymuconate delta-isomerase NP_948327.1 3383055 R 258594 CDS NP_948328.1 39936052 2691195 3383593..3384438 1 NC_005296.1 hypothetical protein 3384438 2691195 RPA2987 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948328.1 3383593 D 258594 CDS NP_948329.1 39936053 2691170 3384525..3385103 1 NC_005296.1 N-acetyltransferase GCN5 3385103 yrkN 2691170 yrkN Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_948329.1 3384525 D 258594 CDS NP_948330.1 39936054 2691394 3385144..3386145 1 NC_005296.1 quinone oxidoreductase 3386145 2691394 RPA2989 Rhodopseudomonas palustris CGA009 quinone oxidoreductase NP_948330.1 3385144 D 258594 CDS NP_948331.1 39936055 2691139 complement(3386280..3386771) 1 NC_005296.1 hypothetical protein 3386771 2691139 RPA2990 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948331.1 3386280 R 258594 CDS NP_948332.1 39936056 2691144 complement(3386893..3387189) 1 NC_005296.1 hypothetical protein 3387189 2691144 RPA2991 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948332.1 3386893 R 258594 CDS NP_948333.1 39936057 2691072 complement(3387497..3388180) 1 NC_005296.1 hypothetical protein 3388180 2691072 RPA2992 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948333.1 3387497 R 258594 CDS NP_948334.1 39936058 2693068 complement(3388210..3388863) 1 NC_005296.1 hypothetical protein 3388863 2693068 RPA2993 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948334.1 3388210 R 258594 CDS NP_948335.1 39936059 2691014 complement(3388995..3389873) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; LysR family transcriptional regulator 3389873 2691014 RPA2994 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_948335.1 3388995 R 258594 CDS NP_948336.1 39936060 2693052 3389982..3391553 1 NC_005296.1 NADH-ubiquinone/plastoquinone (complex I) 3391553 nuoL3 2693052 nuoL3 Rhodopseudomonas palustris CGA009 NADH-ubiquinone/plastoquinone (complex I) NP_948336.1 3389982 D 258594 CDS NP_948337.1 39936061 2690986 3391575..3394001 1 NC_005296.1 hypothetical protein 3394001 2690986 RPA2996 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948337.1 3391575 D 258594 CDS NP_948338.1 39936062 2692984 3394158..3394445 1 NC_005296.1 hypothetical protein 3394445 2692984 RPA2997 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948338.1 3394158 D 258594 CDS NP_948339.1 39936063 2692961 3394449..3395372 1 NC_005296.1 dihydrodipicolinate synthase 3395372 dapA1 2692961 dapA1 Rhodopseudomonas palustris CGA009 dihydrodipicolinate synthase NP_948339.1 3394449 D 258594 CDS NP_948340.1 39936064 2692986 complement(3395404..3395850) 1 NC_005296.1 nitrogen regulatory IIA protein 3395850 ptsN2 2692986 ptsN2 Rhodopseudomonas palustris CGA009 nitrogen regulatory IIA protein NP_948340.1 3395404 R 258594 CDS NP_948341.1 39936065 2692999 complement(3395874..3396557) 1 NC_005296.1 two-component osmotic transcriptional regulator KdpE 3396557 kdpE 2692999 kdpE Rhodopseudomonas palustris CGA009 two-component osmotic transcriptional regulator KdpE NP_948341.1 3395874 R 258594 CDS NP_948342.1 39936066 2692905 complement(3396563..3399286) 1 NC_005296.1 two component osmosensitive K+channel and sensor histidine kinase KdpD 3399286 kdpD 2692905 kdpD Rhodopseudomonas palustris CGA009 two component osmosensitive K+channel and sensor histidine kinase KdpD NP_948342.1 3396563 R 258594 CDS NP_948343.1 39936067 2692938 complement(3399332..3399937) 1 NC_005296.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 3399937 kdpC 2692938 kdpC Rhodopseudomonas palustris CGA009 potassium-transporting ATPase subunit C NP_948343.1 3399332 R 258594 CDS NP_948344.1 39936068 2692861 complement(3399950..3402079) 1 NC_005296.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 3402079 kdpB 2692861 kdpB Rhodopseudomonas palustris CGA009 potassium-transporting ATPase subunit B NP_948344.1 3399950 R 258594 CDS NP_948345.1 39936069 2692742 complement(3402089..3403792) 1 NC_005296.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 3403792 kdpA 2692742 kdpA Rhodopseudomonas palustris CGA009 potassium-transporting ATPase subunit A NP_948345.1 3402089 R 258594 CDS NP_948346.1 39936070 2692812 3404124..3404417 1 NC_005296.1 hypothetical protein 3404417 2692812 RPA3005 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948346.1 3404124 D 258594 CDS NP_948347.1 39936071 2692678 3404723..3405283 1 NC_005296.1 hypothetical protein 3405283 2692678 RPA3006 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948347.1 3404723 D 258594 CDS NP_948348.1 39936072 2692657 3405291..3406031 1 NC_005296.1 hypothetical protein 3406031 2692657 RPA3007 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948348.1 3405291 D 258594 CDS NP_948349.1 39936073 2692607 complement(3406021..3407925) 1 NC_005296.1 potassium uptake protein Kup 3407925 kup2 2692607 kup2 Rhodopseudomonas palustris CGA009 potassium uptake protein Kup NP_948349.1 3406021 R 258594 CDS NP_948350.1 39936074 2688839 3408431..3408586 1 NC_005296.1 light harvesting protein B-800-850 beta subunit C 3408586 pucBc 2688839 pucBc Rhodopseudomonas palustris CGA009 light harvesting protein B-800-850 beta subunit C NP_948350.1 3408431 D 258594 CDS NP_948351.1 39936075 2689995 complement(3409321..3409959) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3409959 2689995 RPA3011 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948351.1 3409321 R 258594 CDS NP_948352.1 39936076 2690955 complement(3410110..3410289) 1 NC_005296.1 light harvesting protein B-800-850 alpha subunit D 3410289 pucAd 2690955 pucAd Rhodopseudomonas palustris CGA009 light harvesting protein B-800-850 alpha subunit D NP_948352.1 3410110 R 258594 CDS NP_948353.1 39936077 2690920 complement(3410302..3410457) 1 NC_005296.1 light harvesting protein B-800-850 beta subunit D 3410457 pucBd 2690920 pucBd Rhodopseudomonas palustris CGA009 light harvesting protein B-800-850 beta subunit D NP_948353.1 3410302 R 258594 CDS NP_948354.1 39936078 2690960 3410877..3411584 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; LuxR family transcriptional regulator 3411584 2690960 RPA3014 Rhodopseudomonas palustris CGA009 LuxR family transcriptional regulator NP_948354.1 3410877 D 258594 CDS NP_948355.1 39936079 2690945 3411808..3414084 1 NC_005296.1 bacteriophytochrome PhyB 3414084 phyB1 2690945 phyB1 Rhodopseudomonas palustris CGA009 bacteriophytochrome PhyB NP_948355.1 3411808 D 258594 CDS NP_948356.1 39936080 2692538 3414088..3416415 1 NC_005296.1 bacteriophytochrome PhyB 3416415 phyB2 2692538 phyB2 Rhodopseudomonas palustris CGA009 bacteriophytochrome PhyB NP_948356.1 3414088 D 258594 CDS NP_948357.1 39936081 2691640 3416416..3416880 1 NC_005296.1 chemotaxis protein CheY 3416880 rphyB 2691640 rphyB Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_948357.1 3416416 D 258594 CDS NP_948358.1 39936082 2691575 3416877..3418013 1 NC_005296.1 response regulator receiver sensor signal transduction histidine kinase 3418013 2691575 RPA3018 Rhodopseudomonas palustris CGA009 response regulator receiver sensor signal transduction histidine kinase NP_948358.1 3416877 D 258594 CDS NP_948359.1 39936083 2691511 complement(3421479..3422678) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; RND multidrug efflux membrane fusion protein MexE 3422678 mexE 2691511 mexE Rhodopseudomonas palustris CGA009 RND multidrug efflux membrane fusion protein MexE NP_948359.1 3421479 R 258594 CDS NP_948360.1 39936084 2692683 3422874..3423461 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TetR family transcriptional regulator 3423461 2692683 RPA3021 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_948360.1 3422874 D 258594 CDS NP_948361.1 39936085 2692726 3423592..3424758 1 NC_005296.1 diguanylate cyclase 3424758 2692726 RPA3022 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_948361.1 3423592 D 258594 CDS NP_948362.1 39936086 2692689 3424892..3425878 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; aldo/keto reductase 3425878 2692689 RPA3023 Rhodopseudomonas palustris CGA009 aldo/keto reductase NP_948362.1 3424892 D 258594 CDS NP_948363.1 39936087 2692799 complement(3425900..3426310) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3426310 2692799 RPA3024 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948363.1 3425900 R 258594 CDS NP_948364.1 39936088 2692840 3426447..3426773 1 NC_005296.1 hypothetical protein 3426773 2692840 RPA3025 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948364.1 3426447 D 258594 CDS NP_948365.1 39936089 2692870 3426819..3427469 1 NC_005296.1 abortive infection protein 3427469 2692870 RPA3026 Rhodopseudomonas palustris CGA009 abortive infection protein NP_948365.1 3426819 D 258594 CDS NP_948366.1 39936090 2692818 complement(3427479..3429341) 1 NC_005296.1 K+ potassium transporter 3429341 kup1 2692818 kup1 Rhodopseudomonas palustris CGA009 K+ potassium transporter NP_948366.1 3427479 R 258594 CDS NP_948367.1 39936091 2692919 complement(3429602..3430441) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3430441 2692919 RPA3028 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948367.1 3429602 R 258594 CDS NP_948368.1 39936092 2692975 3430730..3430912 1 NC_005296.1 hypothetical protein 3430912 2692975 RPA3029 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948368.1 3430730 D 258594 CDS NP_948369.1 39936093 2691004 3431088..3431384 1 NC_005296.1 hypothetical protein 3431384 2691004 RPA3030 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948369.1 3431088 D 258594 CDS NP_948370.1 39936094 2690043 complement(3431503..3432126) 1 NC_005296.1 acetyltransferase 3432126 2690043 RPA3031 Rhodopseudomonas palustris CGA009 acetyltransferase NP_948370.1 3431503 R 258594 CDS NP_948371.1 39936095 2693075 complement(3432381..3432779) 1 NC_005296.1 phenylacetic acid degradation-like protein 3432779 2693075 RPA3032 Rhodopseudomonas palustris CGA009 phenylacetic acid degradation-like protein NP_948371.1 3432381 R 258594 CDS NP_948372.1 39936096 2691069 complement(3432927..3434207) 1 NC_005296.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 3434207 argE 2691069 argE Rhodopseudomonas palustris CGA009 acetylornithine deacetylase NP_948372.1 3432927 R 258594 CDS NP_948373.1 39936097 2691409 3434340..3434603 1 NC_005296.1 hypothetical protein 3434603 2691409 RPA3034 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948373.1 3434340 D 258594 CDS NP_948374.1 39936098 2691109 complement(3434632..3435048) 1 NC_005296.1 hypothetical protein 3435048 2691109 RPA3035 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948374.1 3434632 R 258594 CDS NP_948375.1 39936099 2693086 complement(3435160..3435408) 1 NC_005296.1 hypothetical protein 3435408 2693086 RPA3036 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948375.1 3435160 R 258594 CDS NP_948376.1 39936100 2691132 complement(3436290..3436868) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; CreA family protein 3436868 2691132 RPA3037 Rhodopseudomonas palustris CGA009 CreA family protein NP_948376.1 3436290 R 258594 CDS NP_948377.1 39936101 2690056 3437018..3438631 1 NC_005296.1 hypothetical protein 3438631 2690056 RPA3038 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948377.1 3437018 D 258594 CDS NP_948378.1 39936102 2691171 3438785..3439723 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; polysaccharide deacetylase 3439723 2691171 RPA3039 Rhodopseudomonas palustris CGA009 polysaccharide deacetylase NP_948378.1 3438785 D 258594 CDS NP_948379.1 39936103 2691146 3439761..3440324 1 NC_005296.1 hypothetical protein 3440324 2691146 RPA3040 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948379.1 3439761 D 258594 CDS NP_948380.1 39936104 2691206 complement(3440328..3440777) 1 NC_005296.1 hypothetical protein 3440777 2691206 RPA3041 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948380.1 3440328 R 258594 CDS NP_948381.1 39936105 2690067 complement(3440872..3443196) 1 NC_005296.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3443196 mao 2690067 mao Rhodopseudomonas palustris CGA009 malic enzyme NP_948381.1 3440872 R 258594 CDS NP_948382.1 39936106 2691254 complement(3443227..3445002) 1 NC_005296.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 3445002 aspS 2691254 aspS Rhodopseudomonas palustris CGA009 aspartyl-tRNA synthetase NP_948382.1 3443227 R 258594 CDS NP_948383.1 39936107 2691232 3445262..3446740 1 NC_005296.1 hypothetical protein 3446740 2691232 RPA3044 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948383.1 3445262 D 258594 CDS NP_948384.1 39936108 2690116 3446844..3448022 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ribonuclease D 3448022 rnd 2690116 rnd Rhodopseudomonas palustris CGA009 ribonuclease D NP_948384.1 3446844 D 258594 CDS NP_948385.1 39936109 2690137 3448019..3448942 1 NC_005296.1 hypothetical protein 3448942 2690137 RPA3046 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948385.1 3448019 D 258594 CDS NP_948386.1 39936110 2690125 complement(3448964..3450469) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Ppx/GppA phosphatase 3450469 2690125 RPA3047 Rhodopseudomonas palustris CGA009 Ppx/GppA phosphatase NP_948386.1 3448964 R 258594 CDS NP_948387.1 39936111 2691694 complement(3450482..3452773) 1 NC_005296.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3452773 2691694 RPA3048 Rhodopseudomonas palustris CGA009 polyphosphate kinase NP_948387.1 3450482 R 258594 CDS NP_948388.1 39936112 2690222 complement(3452843..3453532) 1 NC_005296.1 hypothetical protein 3453532 2690222 RPA3049 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948388.1 3452843 R 258594 CDS NP_948389.1 39936113 2690190 complement(3453563..3454192) 1 NC_005296.1 CDP-alcohol phosphatidyltransferase 3454192 2690190 RPA3050 Rhodopseudomonas palustris CGA009 CDP-alcohol phosphatidyltransferase NP_948389.1 3453563 R 258594 CDS NP_948390.1 39936114 2691510 3454375..3455448 1 NC_005296.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3455448 purM 2691510 purM Rhodopseudomonas palustris CGA009 phosphoribosylaminoimidazole synthetase NP_948390.1 3454375 D 258594 CDS NP_948391.1 39936115 2691559 3455457..3456110 1 NC_005296.1 phosphoribosylglycinamide formyltransferase 3456110 purN 2691559 purN Rhodopseudomonas palustris CGA009 phosphoribosylglycinamide formyltransferase NP_948391.1 3455457 D 258594 CDS NP_948392.1 39936116 2691717 complement(3456174..3456377) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cold-shock DNA-binding domain-containing protein 3456377 cspA3 2691717 cspA3 Rhodopseudomonas palustris CGA009 cold-shock DNA-binding domain-containing protein NP_948392.1 3456174 R 258594 CDS NP_948393.1 39936117 2691698 3456869..3457642 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Crp/Fnr family transcriptional regulator 3457642 2691698 RPA3054 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_948393.1 3456869 D 258594 CDS NP_948394.1 39936118 2689154 complement(3457725..3458546) 1 NC_005296.1 TerC family integral membrane protein 3458546 2689154 RPA3055 Rhodopseudomonas palustris CGA009 TerC family integral membrane protein NP_948394.1 3457725 R 258594 CDS NP_948395.1 39936119 2691809 complement(3458619..3459041) 1 NC_005296.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 3459041 ndk 2691809 ndk Rhodopseudomonas palustris CGA009 nucleoside diphosphate kinase NP_948395.1 3458619 R 258594 CDS NP_948396.1 39936120 2690270 3459188..3461065 1 NC_005296.1 ABC transporter ATPase 3461065 2690270 RPA3057 Rhodopseudomonas palustris CGA009 ABC transporter ATPase NP_948396.1 3459188 D 258594 CDS NP_948397.1 39936121 2691882 complement(3461069..3461608) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3461608 2691882 RPA3058 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948397.1 3461069 R 258594 CDS NP_948398.1 39936122 2691857 complement(3461736..3462188) 1 NC_005296.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 3462188 2691857 RPA3059 Rhodopseudomonas palustris CGA009 DNA polymerase III subunit chi NP_948398.1 3461736 R 258594 CDS NP_948399.1 39936123 2690512 complement(3462199..3463701) 1 NC_005296.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 3463701 2690512 RPA3060 Rhodopseudomonas palustris CGA009 leucyl aminopeptidase NP_948399.1 3462199 R 258594 CDS NP_948400.1 39936124 2691927 3464110..3465276 1 NC_005296.1 permease YjgP/YjgQ 3465276 2691927 RPA3061 Rhodopseudomonas palustris CGA009 permease YjgP/YjgQ NP_948400.1 3464110 D 258594 CDS NP_948401.1 39936125 2690554 3465290..3466375 1 NC_005296.1 permease YjgP/YjgQ 3466375 2690554 RPA3062 Rhodopseudomonas palustris CGA009 permease YjgP/YjgQ NP_948401.1 3465290 D 258594 CDS NP_948402.1 39936126 2690311 3466375..3468888 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; organic solvent tolerance protein 3468888 2690311 RPA3063 Rhodopseudomonas palustris CGA009 organic solvent tolerance protein NP_948402.1 3466375 D 258594 CDS NP_948403.1 39936127 2690600 3468967..3469893 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3469893 2690600 RPA3064 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948403.1 3468967 D 258594 CDS NP_948404.1 39936128 2690551 3469954..3470967 1 NC_005296.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 3470967 pdxA 2690551 pdxA Rhodopseudomonas palustris CGA009 4-hydroxythreonine-4-phosphate dehydrogenase NP_948404.1 3469954 D 258594 CDS NP_948405.1 39936129 2691983 3470964..3471827 1 NC_005296.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 3471827 ksgA 2691983 ksgA Rhodopseudomonas palustris CGA009 dimethyladenosine transferase NP_948405.1 3470964 D 258594 CDS NP_948406.1 39936130 2691999 3471844..3472902 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NAD-dependent alcohol dehydrogenase 3472902 2691999 RPA3067 Rhodopseudomonas palustris CGA009 NAD-dependent alcohol dehydrogenase NP_948406.1 3471844 D 258594 CDS NP_948407.1 39936131 2692025 3472944..3474239 1 NC_005296.1 28% identity with Bradyrhizobium japonicum Bll4089 protein; hypothetical protein 3474239 2692025 RPA3068 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948407.1 3472944 D 258594 CDS NP_948408.1 39936132 2689057 complement(3474243..3474905) 1 NC_005296.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3474905 gmk 2689057 gmk Rhodopseudomonas palustris CGA009 guanylate kinase NP_948408.1 3474243 R 258594 CDS NP_948409.1 39936133 2690663 complement(3474908..3475795) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3475795 2690663 RPA3070 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948409.1 3474908 R 258594 CDS NP_948410.1 39936134 2690646 complement(3475897..3477153) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; aminodeoxychorismate lyase 3477153 2690646 RPA3071 Rhodopseudomonas palustris CGA009 aminodeoxychorismate lyase NP_948410.1 3475897 R 258594 CDS NP_948411.1 39936135 2691344 complement(3477356..3478621) 1 NC_005296.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 3478621 fabF 2691344 fabF Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP synthase NP_948411.1 3477356 R 258594 CDS NP_948412.1 39936136 2692052 complement(3478718..3478957) 1 NC_005296.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 3478957 acpP 2692052 acpP Rhodopseudomonas palustris CGA009 acyl carrier protein NP_948412.1 3478718 R 258594 CDS NP_948413.1 39936137 2692037 complement(3479262..3479999) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-oxoacyl-(acyl-carrier-protein) reductase 3479999 fabG2 2692037 fabG2 Rhodopseudomonas palustris CGA009 3-oxoacyl-(acyl-carrier-protein) reductase NP_948413.1 3479262 R 258594 CDS NP_948414.1 39936138 2689712 complement(3480019..3480978) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; malonyl CoA-ACP transacylase 3480978 fabD 2689712 fabD Rhodopseudomonas palustris CGA009 malonyl CoA-ACP transacylase NP_948414.1 3480019 R 258594 CDS NP_948415.1 39936139 2689731 3481244..3482593 1 NC_005296.1 diguanylate cyclase 3482593 2689731 RPA3076 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_948415.1 3481244 D 258594 CDS NP_948416.1 39936140 2690703 3482765..3483241 1 NC_005296.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 3483241 rpsF 2690703 rpsF Rhodopseudomonas palustris CGA009 30S ribosomal protein S6 NP_948416.1 3482765 D 258594 CDS NP_948417.1 39936141 2690726 3483247..3483486 1 NC_005296.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 3483486 rpsR 2690726 rpsR Rhodopseudomonas palustris CGA009 30S ribosomal protein S18 NP_948417.1 3483247 D 258594 CDS NP_948418.1 39936142 2690761 3483613..3484563 1 NC_005296.1 hypothetical protein 3484563 2690761 RPA3079 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948418.1 3483613 D 258594 CDS NP_948419.1 39936143 2692194 3484599..3485186 1 NC_005296.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 3485186 rplI 2692194 rplI Rhodopseudomonas palustris CGA009 50S ribosomal protein L9 NP_948419.1 3484599 D 258594 CDS NP_948420.1 39936144 2690394 complement(3485351..3486322) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3486322 2690394 RPA3081 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948420.1 3485351 R 258594 CDS NP_948421.1 39936145 2689976 3486581..3487831 1 NC_005296.1 cyclopropane-fatty-acyl-phospholipid synthase 3487831 cfa2 2689976 cfa2 Rhodopseudomonas palustris CGA009 cyclopropane-fatty-acyl-phospholipid synthase NP_948421.1 3486581 D 258594 CDS NP_948422.1 39936146 2691697 complement(3487853..3488050) 1 NC_005296.1 hypothetical protein 3488050 2691697 RPA3083 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948422.1 3487853 R 258594 CDS NP_948423.1 39936147 2688811 3488450..3489946 1 NC_005296.1 unwinds double stranded DNA; replicative DNA helicase 3489946 dnaB 2688811 dnaB Rhodopseudomonas palustris CGA009 replicative DNA helicase NP_948423.1 3488450 D 258594 CDS NP_948424.1 39936148 2692243 3490014..3491255 1 NC_005296.1 alanine racemase 3491255 2692243 RPA3085 Rhodopseudomonas palustris CGA009 alanine racemase NP_948424.1 3490014 D 258594 CDS NP_948425.1 39936149 2692327 complement(3491385..3491642) 1 NC_005296.1 hypothetical protein 3491642 2692327 RPA3086 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948425.1 3491385 R 258594 CDS NP_948426.1 39936150 2690842 complement(3491639..3493276) 1 NC_005296.1 hypothetical protein 3493276 2690842 RPA3087 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948426.1 3491639 R 258594 CDS NP_948427.1 39936151 2690808 complement(3493736..3494128) 1 NC_005296.1 hypothetical protein 3494128 2690808 RPA3088 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948427.1 3493736 R 258594 CDS NP_948428.1 39936152 2692375 3494276..3495733 1 NC_005296.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 3495733 RadA 2692375 RadA Rhodopseudomonas palustris CGA009 DNA repair protein RadA NP_948428.1 3494276 D 258594 CDS NP_948429.1 39936153 2692348 3495947..3496582 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; colicin V production protein 3496582 2692348 RPA3090 Rhodopseudomonas palustris CGA009 colicin V production protein NP_948429.1 3495947 D 258594 CDS NP_948430.1 39936154 2690904 3496606..3498135 1 NC_005296.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 3498135 purF 2690904 purF Rhodopseudomonas palustris CGA009 amidophosphoribosyltransferase NP_948430.1 3496606 D 258594 CDS NP_948431.1 39936155 2690406 3498265..3499008 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; oxidoreductase 3499008 2690406 RPA3092 Rhodopseudomonas palustris CGA009 oxidoreductase NP_948431.1 3498265 D 258594 CDS NP_948432.1 39936156 2690919 3499092..3500318 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter urea/short-chain binding protein 3500318 2690919 RPA3093 Rhodopseudomonas palustris CGA009 ABC transporter urea/short-chain binding protein NP_948432.1 3499092 D 258594 CDS NP_948433.1 39936157 2690900 complement(3500339..3501625) 1 NC_005296.1 major facilitator transporter 3501625 2690900 RPA3094 Rhodopseudomonas palustris CGA009 major facilitator transporter NP_948433.1 3500339 R 258594 CDS NP_948434.1 39936158 2692468 complement(3501622..3503001) 1 NC_005296.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3503001 engA 2692468 engA Rhodopseudomonas palustris CGA009 GTP-binding protein EngA NP_948434.1 3501622 R 258594 CDS NP_948435.1 39936159 2692474 complement(3503075..3503626) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3503626 2692474 RPA3096 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948435.1 3503075 R 258594 CDS NP_948436.1 39936160 2689764 complement(3503672..3504361) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3504361 2689764 RPA3097 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948436.1 3503672 R 258594 CDS NP_948437.1 39936161 2693138 complement(3504491..3505315) 1 NC_005296.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3505315 panB 2693138 panB Rhodopseudomonas palustris CGA009 3-methyl-2-oxobutanoate hydroxymethyltransferase NP_948437.1 3504491 R 258594 CDS NP_948438.1 39936162 2689236 complement(3505318..3505902) 1 NC_005296.1 NnrU family protein 3505902 2689236 RPA3099 Rhodopseudomonas palustris CGA009 NnrU family protein NP_948438.1 3505318 R 258594 CDS NP_948439.1 39936163 2689216 3506040..3507044 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3507044 2689216 RPA3100 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948439.1 3506040 D 258594 CDS NP_948440.1 39936164 2689341 complement(3507093..3507578) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3507578 2689341 RPA3101 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948440.1 3507093 R 258594 CDS NP_948441.1 39936165 2689286 complement(3507682..3507948) 1 NC_005296.1 hypothetical protein 3507948 2689286 RPA3102 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948441.1 3507682 R 258594 CDS NP_948442.1 39936166 2693096 complement(3508623..3508823) 1 NC_005296.1 hypothetical protein 3508823 2693096 RPA3103 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948442.1 3508623 R 258594 CDS NP_948443.1 39936167 2689870 complement(3509284..3510768) 1 NC_005296.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 3510768 gatB 2689870 gatB Rhodopseudomonas palustris CGA009 aspartyl/glutamyl-tRNA amidotransferase subunit B NP_948443.1 3509284 R 258594 CDS NP_948444.1 39936168 2689703 complement(3510864..3512249) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; patatin-like phospholipase domain-containing protein 3512249 2689703 RPA3105 Rhodopseudomonas palustris CGA009 patatin-like phospholipase domain-containing protein NP_948444.1 3510864 R 258594 CDS NP_948445.1 39936169 2689301 complement(3512391..3513497) 1 NC_005296.1 signal transduction histidine kinase 3513497 2689301 RPA3106 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_948445.1 3512391 R 258594 CDS NP_948446.1 39936170 2689357 complement(3513574..3515052) 1 NC_005296.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 3515052 gatA 2689357 gatA Rhodopseudomonas palustris CGA009 aspartyl/glutamyl-tRNA amidotransferase subunit A NP_948446.1 3513574 R 258594 CDS NP_948447.1 39936171 2689576 3515232..3515519 1 NC_005296.1 hypothetical protein 3515519 2689576 RPA3108 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948447.1 3515232 D 258594 CDS NP_948448.1 39936172 2689500 3515467..3515751 1 NC_005296.1 hypothetical protein 3515751 2689500 RPA3109 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948448.1 3515467 D 258594 CDS NP_948449.1 39936173 2689678 complement(3515755..3515961) 1 NC_005296.1 hypothetical protein 3515961 2689678 RPA3110 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948449.1 3515755 R 258594 CDS NP_948450.1 39936174 2689663 complement(3515973..3516260) 1 NC_005296.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 3516260 gatC 2689663 gatC Rhodopseudomonas palustris CGA009 aspartyl/glutamyl-tRNA amidotransferase subunit C NP_948450.1 3515973 R 258594 CDS NP_948451.1 39936175 2689222 complement(3516348..3517424) 1 NC_005296.1 2-nitropropane dioxygenase 3517424 2689222 RPA3112 Rhodopseudomonas palustris CGA009 2-nitropropane dioxygenase NP_948451.1 3516348 R 258594 CDS NP_948452.1 39936176 2693130 3517583..3518065 1 NC_005296.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3518065 2693130 RPA3113 Rhodopseudomonas palustris CGA009 Holliday junction resolvase-like protein NP_948452.1 3517583 D 258594 CDS NP_948453.1 39936177 2689290 3518087..3518473 1 NC_005296.1 SecC motif-containing protein 3518473 2689290 RPA3114 Rhodopseudomonas palustris CGA009 SecC motif-containing protein NP_948453.1 3518087 D 258594 CDS NP_948454.1 39936178 2689320 complement(3518600..3520285) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 3520285 2689320 RPA3115 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_948454.1 3518600 R 258594 CDS NP_948455.1 39936179 2689503 complement(3520331..3521962) 1 NC_005296.1 indole-3-pyruvate decarboxylase 3521962 ipdC 2689503 ipdC Rhodopseudomonas palustris CGA009 indole-3-pyruvate decarboxylase NP_948455.1 3520331 R 258594 CDS NP_948456.1 39936180 2689093 3522153..3523106 1 NC_005296.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 3523106 pyrB 2689093 pyrB Rhodopseudomonas palustris CGA009 aspartate carbamoyltransferase NP_948456.1 3522153 D 258594 CDS NP_948457.1 39936181 2689316 3523126..3524436 1 NC_005296.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 3524436 pyr 2689316 pyr Rhodopseudomonas palustris CGA009 dihydroorotase NP_948457.1 3523126 D 258594 CDS NP_948458.1 39936182 2689419 3524580..3525191 1 NC_005296.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 3525191 2689419 RPA3119 Rhodopseudomonas palustris CGA009 glycerol-3-phosphate acyltransferase PlsY NP_948458.1 3524580 D 258594 CDS NP_948459.1 39936183 2689531 3525318..3526460 1 NC_005296.1 DNA processing protein DprA 3526460 DprA 2689531 DprA Rhodopseudomonas palustris CGA009 DNA processing protein DprA NP_948459.1 3525318 D 258594 CDS NP_948460.1 39936184 2693134 3526551..3527963 1 NC_005296.1 alginate o-acetyltransferase AlgI 3527963 2693134 RPA3121 Rhodopseudomonas palustris CGA009 alginate o-acetyltransferase AlgI NP_948460.1 3526551 D 258594 CDS NP_948461.1 39936185 2689411 3527968..3529158 1 NC_005296.1 hypothetical protein 3529158 2689411 RPA3122 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948461.1 3527968 D 258594 CDS NP_948462.1 39936186 2689240 complement(3529411..3529704) 1 NC_005296.1 hypothetical protein 3529704 2689240 RPA3123 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948462.1 3529411 R 258594 CDS NP_948463.1 39936187 2688774 3529873..3532608 1 NC_005296.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 3532608 TopA 2688774 TopA Rhodopseudomonas palustris CGA009 DNA topoisomerase I NP_948463.1 3529873 D 258594 CDS NP_948464.1 39936188 2689303 3532611..3534956 1 NC_005296.1 ribonuclease R 3534956 RNR 2689303 RNR Rhodopseudomonas palustris CGA009 ribonuclease R NP_948464.1 3532611 D 258594 CDS NP_948465.1 39936189 2689696 3534956..3535384 1 NC_005296.1 hypothetical protein 3535384 2689696 RPA3126 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948465.1 3534956 D 258594 CDS NP_948466.1 39936190 2689807 3535454..3536209 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NUDIX hydrolase 3536209 2689807 RPA3127 Rhodopseudomonas palustris CGA009 NUDIX hydrolase NP_948466.1 3535454 D 258594 CDS NP_948467.1 39936191 2689495 complement(3536244..3537392) 1 NC_005296.1 transport protein 3537392 2689495 RPA3128 Rhodopseudomonas palustris CGA009 transport protein NP_948467.1 3536244 R 258594 CDS NP_948468.1 39936192 2689660 3537789..3537956 1 NC_005296.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3537956 rpmG 2689660 rpmG Rhodopseudomonas palustris CGA009 50S ribosomal protein L33 NP_948468.1 3537789 D 258594 CDS NP_948469.1 39936193 2689632 complement(3538223..3538606) 1 NC_005296.1 XRE family transcriptional regulator 3538606 2689632 RPA3130 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_948469.1 3538223 R 258594 CDS NP_948470.1 39936194 2689697 complement(3538617..3538934) 1 NC_005296.1 hypothetical protein 3538934 2689697 RPA3131 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948470.1 3538617 R 258594 CDS NP_948471.1 39936195 2689355 complement(3538970..3540343) 1 NC_005296.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; response regulator PleD 3540343 pleD 2689355 pleD Rhodopseudomonas palustris CGA009 response regulator PleD NP_948471.1 3538970 R 258594 CDS NP_948472.1 39936196 2689408 complement(3540354..3540719) 1 NC_005296.1 chemotaxis protein CheY 3540719 2689408 RPA3133 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_948472.1 3540354 R 258594 CDS NP_948473.1 39936197 2691655 3540845..3541144 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3541144 2691655 RPA3134 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948473.1 3540845 D 258594 CDS NP_948474.1 39936198 2689592 3541141..3542436 1 NC_005296.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 3542436 dinP 2689592 dinP Rhodopseudomonas palustris CGA009 DNA polymerase IV NP_948474.1 3541141 D 258594 CDS NP_948475.1 39936199 2689440 complement(3542561..3543427) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3543427 2689440 RPA3136 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948475.1 3542561 R 258594 CDS NP_948476.1 39936200 2688847 3543689..3544168 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; endoribonuclease L-PSP 3544168 2688847 RPA3137 Rhodopseudomonas palustris CGA009 endoribonuclease L-PSP NP_948476.1 3543689 D 258594 CDS NP_948477.1 39936201 2689195 3544187..3544933 1 NC_005296.1 glycerophosphoryl diester phosphodiesterase 3544933 2689195 RPA3138 Rhodopseudomonas palustris CGA009 glycerophosphoryl diester phosphodiesterase NP_948477.1 3544187 D 258594 CDS NP_948478.1 39936202 2689309 3544936..3546255 1 NC_005296.1 hypothetical protein 3546255 2689309 RPA3139 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948478.1 3544936 D 258594 CDS NP_948479.1 39936203 2689237 3546263..3546733 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; histidine triad (HIT) protein 3546733 2689237 RPA3140 Rhodopseudomonas palustris CGA009 histidine triad (HIT) protein NP_948479.1 3546263 D 258594 CDS NP_948480.1 39936204 2689194 complement(3546739..3547200) 1 NC_005296.1 hypothetical protein 3547200 2689194 RPA3141 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948480.1 3546739 R 258594 CDS NP_948481.1 39936205 2689450 complement(3547249..3547593) 1 NC_005296.1 hypothetical protein 3547593 2689450 RPA3142 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948481.1 3547249 R 258594 CDS NP_948482.1 39936206 2689577 complement(3547590..3548333) 1 NC_005296.1 hypothetical protein 3548333 2689577 RPA3143 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948482.1 3547590 R 258594 CDS NP_948483.1 39936207 2689867 3548486..3548845 1 NC_005296.1 hypothetical protein 3548845 2689867 RPA3144 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948483.1 3548486 D 258594 CDS NP_948484.1 39936208 2689347 complement(3548862..3549977) 1 NC_005296.1 transglycosylase SLT domain-containing protein 3549977 2689347 RPA3145 Rhodopseudomonas palustris CGA009 transglycosylase SLT domain-containing protein NP_948484.1 3548862 R 258594 CDS NP_948485.1 39936209 2689668 3550605..3552380 1 NC_005296.1 hypothetical protein 3552380 2689668 RPA3146 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948485.1 3550605 D 258594 CDS NP_948486.1 39936210 2691375 complement(3552454..3554838) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; endopeptidase Clp ATP-binding subunit A 3554838 clpA 2691375 clpA Rhodopseudomonas palustris CGA009 endopeptidase Clp ATP-binding subunit A NP_948486.1 3552454 R 258594 CDS NP_948487.1 39936211 2689254 complement(3555032..3555430) 1 NC_005296.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 3555430 clpS 2689254 clpS Rhodopseudomonas palustris CGA009 ATP-dependent Clp protease adaptor protein ClpS NP_948487.1 3555032 R 258594 CDS NP_948488.1 39936212 2689816 3555834..3557201 1 NC_005296.1 hypothetical protein 3557201 2689816 RPA3149 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948488.1 3555834 D 258594 CDS NP_948489.1 39936213 2688850 3557558..3559315 1 NC_005296.1 Serine-type D-Ala-D-Ala carboxypeptidase 3559315 2688850 RPA3150 Rhodopseudomonas palustris CGA009 Serine-type D-Ala-D-Ala carboxypeptidase NP_948489.1 3557558 D 258594 CDS NP_948490.1 39936214 2689510 complement(3559644..3560372) 1 NC_005296.1 heat shock protein DnaJ N-terminal 3560372 2689510 RPA3151 Rhodopseudomonas palustris CGA009 heat shock protein DnaJ N-terminal NP_948490.1 3559644 R 258594 CDS NP_948491.1 39936215 2689622 complement(3560428..3561168) 1 NC_005296.1 hypothetical protein 3561168 2689622 RPA3152 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948491.1 3560428 R 258594 CDS NP_948492.1 39936216 2689321 complement(3561248..3562078) 1 NC_005296.1 hypothetical protein 3562078 2689321 RPA3153 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948492.1 3561248 R 258594 CDS NP_948493.1 39936217 2688773 complement(3562350..3563273) 1 NC_005296.1 chromosome partitioning protein ParA 3563273 2688773 RPA3154 Rhodopseudomonas palustris CGA009 chromosome partitioning protein ParA NP_948493.1 3562350 R 258594 CDS NP_948494.1 39936218 2689631 3563540..3564391 1 NC_005296.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 3564391 panC 2689631 panC Rhodopseudomonas palustris CGA009 pantoate--beta-alanine ligase NP_948494.1 3563540 D 258594 CDS NP_948495.1 39936219 2689201 complement(3564418..3564837) 1 NC_005296.1 hypothetical protein 3564837 2689201 RPA3156 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948495.1 3564418 R 258594 CDS NP_948496.1 39936220 2689706 complement(3564876..3565910) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3565910 2689706 RPA3157 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948496.1 3564876 R 258594 CDS NP_948497.1 39936221 2689182 complement(3566090..3566281) 1 NC_005296.1 hypothetical protein 3566281 2689182 RPA3158 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948497.1 3566090 R 258594 CDS NP_948498.1 39936222 2689448 complement(3566494..3567150) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutathione S-transferase 3567150 2689448 RPA3159 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_948498.1 3566494 R 258594 CDS NP_948499.1 39936223 2689434 complement(3567559..3568353) 1 NC_005296.1 hypothetical protein 3568353 2689434 RPA3160 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948499.1 3567559 R 258594 CDS NP_948500.1 39936224 2689615 complement(3568428..3569261) 1 NC_005296.1 2,5-didehydrogluconate reductase 3569261 yafB 2689615 yafB Rhodopseudomonas palustris CGA009 2,5-didehydrogluconate reductase NP_948500.1 3568428 R 258594 CDS NP_948501.1 39936225 2689611 complement(3569316..3569681) 1 NC_005296.1 XRE family transcriptional regulator 3569681 2689611 RPA3162 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_948501.1 3569316 R 258594 CDS NP_948502.1 39936226 2689799 complement(3569726..3571147) 1 NC_005296.1 magnesium transporter 3571147 mgtE 2689799 mgtE Rhodopseudomonas palustris CGA009 magnesium transporter NP_948502.1 3569726 R 258594 CDS NP_948503.1 39936227 2689513 3571310..3572113 1 NC_005296.1 polysaccharide deacetylase 3572113 2689513 RPA3164 Rhodopseudomonas palustris CGA009 polysaccharide deacetylase NP_948503.1 3571310 D 258594 CDS NP_948504.1 39936228 2691663 3572197..3573570 1 NC_005296.1 polysaccharide deacetylase 3573570 2691663 RPA3165 Rhodopseudomonas palustris CGA009 polysaccharide deacetylase NP_948504.1 3572197 D 258594 CDS NP_948505.1 39936229 2689324 3573642..3574085 1 NC_005296.1 hypothetical protein 3574085 2689324 RPA3166 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948505.1 3573642 D 258594 CDS NP_948506.1 39936230 2693113 3574085..3574546 1 NC_005296.1 hypothetical protein 3574546 2693113 RPA3167 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948506.1 3574085 D 258594 CDS NP_948507.1 39936231 2689526 complement(3574819..3575061) 1 NC_005296.1 hypothetical protein 3575061 2689526 RPA3168 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948507.1 3574819 R 258594 CDS NP_948508.1 39936232 2691386 3575128..3575865 1 NC_005296.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 3575865 lipB 2691386 lipB Rhodopseudomonas palustris CGA009 lipoate-protein ligase B NP_948508.1 3575128 D 258594 CDS NP_948509.1 39936233 2689243 3576134..3578755 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 3578755 2689243 RPA3170 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_948509.1 3576134 D 258594 CDS NP_948510.1 39936234 2689188 complement(3578780..3579211) 1 NC_005296.1 hypothetical protein 3579211 2689188 RPA3171 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948510.1 3578780 R 258594 CDS NP_948511.1 39936235 2689690 3579317..3580165 1 NC_005296.1 LysR family transcriptional regulator 3580165 2689690 RPA3172 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_948511.1 3579317 D 258594 CDS NP_948512.1 39936236 2689610 complement(3580184..3580483) 1 NC_005296.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 3580483 2689610 RPA3173 Rhodopseudomonas palustris CGA009 acylphosphatase NP_948512.1 3580184 R 258594 CDS NP_948513.1 39936237 2689479 complement(3580483..3581349) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3581349 2689479 RPA3174 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948513.1 3580483 R 258594 CDS NP_948514.1 39936238 2688876 complement(3581356..3583371) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbamoyl-phosphate synthase L chain ATP-binding 3583371 2688876 RPA3175 Rhodopseudomonas palustris CGA009 carbamoyl-phosphate synthase L chain ATP-binding NP_948514.1 3581356 R 258594 CDS NP_948515.1 39936239 2689702 3583525..3585375 1 NC_005296.1 hypothetical protein 3585375 2689702 RPA3176 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948515.1 3583525 D 258594 CDS NP_948516.1 39936240 2689446 complement(3585412..3586218) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3586218 2689446 RPA3177 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948516.1 3585412 R 258594 CDS NP_948517.1 39936241 2689351 complement(3586281..3586679) 1 NC_005296.1 hypothetical protein 3586679 2689351 RPA3178 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948517.1 3586281 R 258594 CDS NP_948518.1 39936242 2689532 3586798..3588249 1 NC_005296.1 deoxyribodipyrimidine photolyase 3588249 2689532 RPA3179 Rhodopseudomonas palustris CGA009 deoxyribodipyrimidine photolyase NP_948518.1 3586798 D 258594 CDS NP_948519.1 39936243 2689687 3588328..3588645 1 NC_005296.1 hypothetical protein 3588645 2689687 RPA3180 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948519.1 3588328 D 258594 CDS NP_948520.1 39936244 2691642 complement(3588752..3589627) 1 NC_005296.1 DMT family permease 3589627 2691642 RPA3181 Rhodopseudomonas palustris CGA009 DMT family permease NP_948520.1 3588752 R 258594 CDS NP_948521.1 39936245 2689284 3589781..3590689 1 NC_005296.1 phenazine biosynthesis PhzC/PhzF protein 3590689 phzF 2689284 phzF Rhodopseudomonas palustris CGA009 phenazine biosynthesis PhzC/PhzF protein NP_948521.1 3589781 D 258594 CDS NP_948522.1 39936246 2689279 complement(3590744..3591190) 1 NC_005296.1 hypothetical protein 3591190 2689279 RPA3183 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948522.1 3590744 R 258594 CDS NP_948523.1 39936247 2689268 complement(3591608..3592957) 1 NC_005296.1 cylclic diguanylate phosphodiesterase 3592957 2689268 RPA3184 Rhodopseudomonas palustris CGA009 cylclic diguanylate phosphodiesterase NP_948523.1 3591608 R 258594 CDS NP_948524.1 39936248 2689614 3593862..3595880 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 3595880 2689614 RPA3185 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_948524.1 3593862 D 258594 CDS NP_948525.1 39936249 2689226 3596045..3596395 1 NC_005296.1 hypothetical protein 3596395 2689226 RPA3186 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948525.1 3596045 D 258594 CDS NP_948526.1 39936250 2689876 complement(3596427..3599180) 1 NC_005296.1 sensor histidine kinase 3599180 2689876 RPA3187 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_948526.1 3596427 R 258594 CDS NP_948527.1 39936251 2689853 complement(3599316..3601490) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alcohol dehydrogenase 3601490 2689853 RPA3188 Rhodopseudomonas palustris CGA009 alcohol dehydrogenase NP_948527.1 3599316 R 258594 CDS NP_948528.1 39936252 2692487 complement(3601644..3602435) 1 NC_005296.1 NUDIX hydrolase 3602435 2692487 RPA3189 Rhodopseudomonas palustris CGA009 NUDIX hydrolase NP_948528.1 3601644 R 258594 CDS NP_948529.1 39936253 2689989 complement(3602440..3603393) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; dihydrodipicolinate synthetase 3603393 2689989 RPA3190 Rhodopseudomonas palustris CGA009 dihydrodipicolinate synthetase NP_948529.1 3602440 R 258594 CDS NP_948530.1 39936254 2692480 complement(3603496..3604374) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase 3604374 2692480 RPA3191 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase NP_948530.1 3603496 R 258594 CDS NP_948531.1 39936255 2690424 complement(3604521..3605381) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl dehydratase 3605381 2690424 RPA3192 Rhodopseudomonas palustris CGA009 acyl dehydratase NP_948531.1 3604521 R 258594 CDS NP_948532.1 39936256 2689769 complement(3605568..3605960) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3605960 2689769 RPA3193 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948532.1 3605568 R 258594 CDS NP_948533.1 39936257 2689761 complement(3605960..3607108) 1 NC_005296.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3607108 2689761 RPA3194 Rhodopseudomonas palustris CGA009 acetyl-CoA acetyltransferase NP_948533.1 3605960 R 258594 CDS NP_948534.1 39936258 2689752 complement(3607397..3610882) 1 NC_005296.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3610882 2689752 RPA3195 Rhodopseudomonas palustris CGA009 indolepyruvate ferredoxin oxidoreductase NP_948534.1 3607397 R 258594 CDS NP_948535.1 39936259 2692476 3611163..3611609 1 NC_005296.1 hypothetical protein 3611609 2692476 RPA3196 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948535.1 3611163 D 258594 CDS NP_948536.1 39936260 2689845 3611854..3612141 1 NC_005296.1 hypothetical protein 3612141 2689845 RPA3197 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948536.1 3611854 D 258594 CDS NP_948537.1 39936261 2692427 complement(3612206..3613015) 1 NC_005296.1 hypothetical protein 3613015 2692427 RPA3198 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948537.1 3612206 R 258594 CDS NP_948538.1 39936262 2692393 complement(3613121..3613669) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3613669 2692393 RPA3199 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948538.1 3613121 R 258594 CDS NP_948539.1 39936263 2690876 complement(3613758..3615554) 1 NC_005296.1 dual serine/threonine-protein kinase/phosphatase 3615554 2690876 RPA3200 Rhodopseudomonas palustris CGA009 dual serine/threonine-protein kinase/phosphatase NP_948539.1 3613758 R 258594 CDS NP_948540.1 39936264 2690860 complement(3615559..3616398) 1 NC_005296.1 formate/nitrate transporter 3616398 2690860 RPA3201 Rhodopseudomonas palustris CGA009 formate/nitrate transporter NP_948540.1 3615559 R 258594 CDS NP_948541.1 39936265 2690400 complement(3617129..3617986) 1 NC_005296.1 hypothetical protein 3617986 2690400 RPA3202 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948541.1 3617129 R 258594 CDS NP_948542.1 39936266 2690817 complement(3618197..3619729) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carboxyl transferase 3619729 pccB 2690817 pccB Rhodopseudomonas palustris CGA009 carboxyl transferase NP_948542.1 3618197 R 258594 CDS NP_948543.1 39936267 2692353 3620009..3620425 1 NC_005296.1 hypothetical protein 3620425 2692353 RPA3204 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948543.1 3620009 D 258594 CDS NP_948544.1 39936268 2692332 complement(3620427..3620702) 1 NC_005296.1 Type III secretion proteins related to flagellar biosynthesis protein FlhB 3620702 2692332 RPA3205 Rhodopseudomonas palustris CGA009 Type III secretion proteins related to flagellar biosynthesis protein FlhB NP_948544.1 3620427 R 258594 CDS NP_948545.1 39936269 2690803 complement(3620699..3622498) 1 NC_005296.1 hypothetical protein 3622498 2690803 RPA3206 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948545.1 3620699 R 258594 CDS NP_948546.1 39936270 2690785 complement(3622568..3623353) 1 NC_005296.1 ATP12 ATPase 3623353 2690785 RPA3207 Rhodopseudomonas palustris CGA009 ATP12 ATPase NP_948546.1 3622568 R 258594 CDS NP_948547.1 39936271 2689736 complement(3623771..3625138) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pseudouridine synthase 3625138 rluC 2689736 rluC Rhodopseudomonas palustris CGA009 pseudouridine synthase NP_948547.1 3623771 R 258594 CDS NP_948548.1 39936272 2692319 complement(3625343..3625648) 1 NC_005296.1 hypothetical protein 3625648 2692319 RPA3209 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948548.1 3625343 R 258594 CDS NP_948549.1 39936273 2690770 complement(3625694..3626662) 1 NC_005296.1 prolyl oligopeptidase 3626662 2690770 RPA3210 Rhodopseudomonas palustris CGA009 prolyl oligopeptidase NP_948549.1 3625694 R 258594 CDS NP_948550.1 39936274 2689025 3626787..3630191 1 NC_005296.1 TPR repeat-containing protein 3630191 2689025 RPA3211 Rhodopseudomonas palustris CGA009 TPR repeat-containing protein NP_948550.1 3626787 D 258594 CDS NP_948551.1 39936275 2692280 3630220..3630666 1 NC_005296.1 hypothetical protein 3630666 2692280 RPA3212 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948551.1 3630220 D 258594 CDS NP_948552.1 39936276 2692234 3630667..3630882 1 NC_005296.1 hypothetical protein 3630882 2692234 RPA3213 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948552.1 3630667 D 258594 CDS NP_948553.1 39936277 2692230 3630882..3631649 1 NC_005296.1 hypothetical protein 3631649 2692230 RPA3214 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948553.1 3630882 D 258594 CDS NP_948554.1 39936278 2690393 3631787..3632464 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitroreductase 3632464 2690393 RPA3215 Rhodopseudomonas palustris CGA009 nitroreductase NP_948554.1 3631787 D 258594 CDS NP_948555.1 39936279 2692203 3632669..3634729 1 NC_005296.1 sensor histidine kinase 3634729 2692203 RPA3216 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_948555.1 3632669 D 258594 CDS NP_948556.1 39936280 2692187 complement(3634858..3636066) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino-acid ABC transporter substrate-binding protein 3636066 2692187 RPA3217 Rhodopseudomonas palustris CGA009 branched chain amino-acid ABC transporter substrate-binding protein NP_948556.1 3634858 R 258594 CDS NP_948557.1 39936281 2691636 complement(3636172..3636591) 1 NC_005296.1 hypothetical protein 3636591 2691636 RPA3218 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948557.1 3636172 R 258594 CDS NP_948558.1 39936282 2692173 complement(3636661..3638631) 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 3638631 2692173 RPA3219 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_948558.1 3636661 R 258594 CDS NP_948559.1 39936283 2689985 complement(3638930..3640261) 1 NC_005296.1 recombination factor protein RarA 3640261 2689985 RPA3220 Rhodopseudomonas palustris CGA009 recombination factor protein RarA NP_948559.1 3638930 R 258594 CDS NP_948560.1 39936284 2692123 complement(3640484..3641875) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase S1C Do 3641875 2692123 RPA3221 Rhodopseudomonas palustris CGA009 peptidase S1C Do NP_948560.1 3640484 R 258594 CDS NP_948561.1 39936285 2690756 complement(3641958..3642434) 1 NC_005296.1 MarR family transcriptional regulator 3642434 2690756 RPA3222 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_948561.1 3641958 R 258594 CDS NP_948562.1 39936286 2690746 3642465..3643481 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alginate lyase 3643481 2690746 RPA3223 Rhodopseudomonas palustris CGA009 alginate lyase NP_948562.1 3642465 D 258594 CDS NP_948563.1 39936287 2690701 complement(3643705..3644499) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase 3644499 2690701 RPA3224 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase NP_948563.1 3643705 R 258594 CDS NP_948564.1 39936288 2690704 complement(3644784..3645203) 1 NC_005296.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 3645203 rplQ 2690704 rplQ Rhodopseudomonas palustris CGA009 50S ribosomal protein L17 NP_948564.1 3644784 R 258594 CDS NP_948565.1 39936289 2689927 complement(3645359..3646378) 1 NC_005296.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 3646378 rpoA 2689927 rpoA Rhodopseudomonas palustris CGA009 DNA-directed RNA polymerase subunit alpha NP_948565.1 3645359 R 258594 CDS NP_948566.1 39936290 2689827 complement(3646512..3646901) 1 NC_005296.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 3646901 rpsK 2689827 rpsK Rhodopseudomonas palustris CGA009 30S ribosomal protein S11 NP_948566.1 3646512 R 258594 CDS NP_948567.2 161610771 2689714 complement(3647032..3647400) 1 NC_005296.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 3647400 rpsM 2689714 rpsM Rhodopseudomonas palustris CGA009 30S ribosomal protein S13 NP_948567.2 3647032 R 258594 CDS NP_948568.1 39936292 2689377 complement(3647585..3648700) 1 NC_005296.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 3648700 adk 2689377 adk Rhodopseudomonas palustris CGA009 adenylate kinase NP_948568.1 3647585 R 258594 CDS NP_948569.1 39936293 2689570 complement(3648697..3650028) 1 NC_005296.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 3650028 secY 2689570 secY Rhodopseudomonas palustris CGA009 preprotein translocase subunit SecY NP_948569.1 3648697 R 258594 CDS NP_948570.1 39936294 2692072 complement(3650181..3650666) 1 NC_005296.1 late assembly protein; 50S ribosomal protein L15 3650666 rplO 2692072 rplO Rhodopseudomonas palustris CGA009 50S ribosomal protein L15 NP_948570.1 3650181 R 258594 CDS NP_948571.1 39936295 2692067 complement(3650679..3650873) 1 NC_005296.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 3650873 rpmD 2692067 rpmD Rhodopseudomonas palustris CGA009 50S ribosomal protein L30 NP_948571.1 3650679 R 258594 CDS NP_948572.1 39936296 2692063 complement(3650932..3651507) 1 NC_005296.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 3651507 rpsE 2692063 rpsE Rhodopseudomonas palustris CGA009 30S ribosomal protein S5 NP_948572.1 3650932 R 258594 CDS NP_948573.1 39936297 2692042 complement(3651568..3651930) 1 NC_005296.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 3651930 rplR 2692042 rplR Rhodopseudomonas palustris CGA009 50S ribosomal protein L18 NP_948573.1 3651568 R 258594 CDS NP_948574.1 39936298 2691267 complement(3651942..3652475) 1 NC_005296.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 3652475 rplF 2691267 rplF Rhodopseudomonas palustris CGA009 50S ribosomal protein L6 NP_948574.1 3651942 R 258594 CDS NP_948575.1 39936299 2689778 complement(3652588..3652986) 1 NC_005296.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 3652986 rpsH 2689778 rpsH Rhodopseudomonas palustris CGA009 30S ribosomal protein S8 NP_948575.1 3652588 R 258594 CDS NP_948576.1 39936300 2688933 complement(3653002..3653307) 1 NC_005296.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 3653307 rpsN 2688933 rpsN Rhodopseudomonas palustris CGA009 30S ribosomal protein S14 NP_948576.1 3653002 R 258594 CDS NP_948577.1 39936301 2691355 complement(3653351..3653908) 1 NC_005296.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 3653908 rplE 2691355 rplE Rhodopseudomonas palustris CGA009 50S ribosomal protein L5 NP_948577.1 3653351 R 258594 CDS NP_948578.1 39936302 2689021 complement(3653901..3654215) 1 NC_005296.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 3654215 rplX 2689021 rplX Rhodopseudomonas palustris CGA009 50S ribosomal protein L24 NP_948578.1 3653901 R 258594 CDS NP_948579.1 39936303 2689022 complement(3654215..3654583) 1 NC_005296.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 3654583 rplN 2689022 rplN Rhodopseudomonas palustris CGA009 50S ribosomal protein L14 NP_948579.1 3654215 R 258594 CDS NP_948580.1 39936304 2689059 complement(3654647..3654895) 1 NC_005296.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 3654895 rpsQ 2689059 rpsQ Rhodopseudomonas palustris CGA009 30S ribosomal protein S17 NP_948580.1 3654647 R 258594 CDS NP_948581.1 39936305 2690667 complement(3654908..3655117) 1 NC_005296.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 3655117 rpmC 2690667 rpmC Rhodopseudomonas palustris CGA009 50S ribosomal protein L29 NP_948581.1 3654908 R 258594 CDS NP_948582.1 39936306 2690647 complement(3655123..3655536) 1 NC_005296.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 3655536 rplP 2690647 rplP Rhodopseudomonas palustris CGA009 50S ribosomal protein L16 NP_948582.1 3655123 R 258594 CDS NP_948583.1 39936307 2690666 complement(3655572..3656279) 1 NC_005296.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 3656279 rpsC 2690666 rpsC Rhodopseudomonas palustris CGA009 30S ribosomal protein S3 NP_948583.1 3655572 R 258594 CDS NP_948584.1 39936308 2690360 complement(3656302..3656685) 1 NC_005296.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 3656685 rplV 2690360 rplV Rhodopseudomonas palustris CGA009 50S ribosomal protein L22 NP_948584.1 3656302 R 258594 CDS NP_948585.1 39936309 2692035 complement(3656696..3656974) 1 NC_005296.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 3656974 rpsS 2692035 rpsS Rhodopseudomonas palustris CGA009 30S ribosomal protein S19 NP_948585.1 3656696 R 258594 CDS NP_948586.1 39936310 2692032 complement(3656986..3657822) 1 NC_005296.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 3657822 rplB 2692032 rplB Rhodopseudomonas palustris CGA009 50S ribosomal protein L2 NP_948586.1 3656986 R 258594 CDS NP_948587.1 39936311 2690605 complement(3657836..3658135) 1 NC_005296.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 3658135 rplW 2690605 rplW Rhodopseudomonas palustris CGA009 50S ribosomal protein L23 NP_948587.1 3657836 R 258594 CDS NP_948588.1 39936312 2692513 complement(3658132..3658752) 1 NC_005296.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 3658752 rplD 2692513 rplD Rhodopseudomonas palustris CGA009 50S ribosomal protein L4 NP_948588.1 3658132 R 258594 CDS NP_948589.1 39936313 2692016 complement(3658754..3659479) 1 NC_005296.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 3659479 rplC 2692016 rplC Rhodopseudomonas palustris CGA009 50S ribosomal protein L3 NP_948589.1 3658754 R 258594 CDS NP_948590.1 39936314 2691982 complement(3659530..3659838) 1 NC_005296.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 3659838 rpsJ 2691982 rpsJ Rhodopseudomonas palustris CGA009 30S ribosomal protein S10 NP_948590.1 3659530 R 258594 CDS NP_948591.1 39936315 2691965 complement(3659926..3661116) 1 NC_005296.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 3661116 tufA 2691965 tufA Rhodopseudomonas palustris CGA009 elongation factor Tu NP_948591.1 3659926 R 258594 CDS NP_948592.1 39936316 2691963 complement(3661155..3663227) 1 NC_005296.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3663227 fusA 2691963 fusA Rhodopseudomonas palustris CGA009 elongation factor G NP_948592.1 3661155 R 258594 CDS NP_948593.1 39936317 2690599 complement(3663258..3663728) 1 NC_005296.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 3663728 rpsG 2690599 rpsG Rhodopseudomonas palustris CGA009 30S ribosomal protein S7 NP_948593.1 3663258 R 258594 CDS NP_948594.1 39936318 2691958 complement(3663744..3664115) 1 NC_005296.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 3664115 rpsL 2691958 rpsL Rhodopseudomonas palustris CGA009 30S ribosomal protein S12 NP_948594.1 3663744 R 258594 CDS NP_948595.1 39936319 2691949 3664980..3665966 1 NC_005296.1 hypothetical protein 3665966 2691949 RPA3256 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948595.1 3664980 D 258594 CDS NP_948596.1 39936320 2690572 complement(3666065..3666901) 1 NC_005296.1 AraC family transcriptional regulator 3666901 2690572 RPA3257 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_948596.1 3666065 R 258594 CDS NP_948597.1 39936321 2689797 3667022..3667717 1 NC_005296.1 hypothetical protein 3667717 2689797 RPA3258 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948597.1 3667022 D 258594 CDS NP_948598.1 39936322 2690319 complement(3667935..3668468) 1 NC_005296.1 hypothetical protein 3668468 2690319 RPA3259 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948598.1 3667935 R 258594 CDS NP_948599.1 39936323 2690321 complement(3668874..3671003) 1 NC_005296.1 cation-transporting P-type ATPase 3671003 2690321 RPA3260 Rhodopseudomonas palustris CGA009 cation-transporting P-type ATPase NP_948599.1 3668874 R 258594 CDS NP_948600.1 39936324 2690306 3671069..3671470 1 NC_005296.1 heavy metal resistance transcriptional regulator HmrR 3671470 hmrR 2690306 hmrR Rhodopseudomonas palustris CGA009 heavy metal resistance transcriptional regulator HmrR NP_948600.1 3671069 D 258594 CDS NP_948601.1 39936325 2690534 complement(3671513..3672721) 1 NC_005296.1 transporter 3672721 2690534 RPA3262 Rhodopseudomonas palustris CGA009 transporter NP_948601.1 3671513 R 258594 CDS NP_948602.1 39936326 2691945 complement(3672938..3673366) 1 NC_005296.1 hypothetical protein 3673366 phnB 2691945 phnB Rhodopseudomonas palustris CGA009 hypothetical protein NP_948602.1 3672938 R 258594 CDS NP_948603.1 39936327 2691921 3673511..3673972 1 NC_005296.1 MarR family transcriptional regulator 3673972 2691921 RPA3264 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_948603.1 3673511 D 258594 CDS NP_948604.1 39936328 2691903 complement(3674048..3676186) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter 3676186 2691903 RPA3265 Rhodopseudomonas palustris CGA009 ABC transporter NP_948604.1 3674048 R 258594 CDS NP_948605.1 39936329 2689535 complement(3676306..3678369) 1 NC_005296.1 type 11 methyltransferase 3678369 2689535 RPA3266 Rhodopseudomonas palustris CGA009 type 11 methyltransferase NP_948605.1 3676306 R 258594 CDS NP_948606.1 39936330 2691898 complement(3678672..3682880) 1 NC_005296.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 3682880 rpoC 2691898 rpoC Rhodopseudomonas palustris CGA009 DNA-directed RNA polymerase subunit beta' NP_948606.1 3678672 R 258594 CDS NP_948607.1 39936331 2691883 complement(3683017..3687141) 1 NC_005296.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 3687141 rpoB 2691883 rpoB Rhodopseudomonas palustris CGA009 DNA-directed RNA polymerase subunit beta NP_948607.1 3683017 R 258594 CDS NP_948608.1 39936332 2691855 complement(3687607..3687984) 1 NC_005296.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 3687984 rplL 2691855 rplL Rhodopseudomonas palustris CGA009 50S ribosomal protein L7/L12 NP_948608.1 3687607 R 258594 CDS NP_948609.2 161610770 2691846 complement(3688040..3688558) 1 NC_005296.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 3688558 rplJ 2691846 rplJ Rhodopseudomonas palustris CGA009 50S ribosomal protein L10 NP_948609.2 3688040 R 258594 CDS NP_948610.1 39936334 2690508 complement(3689460..3690422) 1 NC_005296.1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3690422 2690508 RPA3271 Rhodopseudomonas palustris CGA009 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase NP_948610.1 3689460 R 258594 CDS NP_948611.1 39936335 2691812 complement(3690510..3691199) 1 NC_005296.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 3691199 rplA 2691812 rplA Rhodopseudomonas palustris CGA009 50S ribosomal protein L1 NP_948611.1 3690510 R 258594 CDS NP_948612.1 39936336 2689145 complement(3691207..3691635) 1 NC_005296.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 3691635 rplK 2689145 rplK Rhodopseudomonas palustris CGA009 50S ribosomal protein L11 NP_948612.1 3691207 R 258594 CDS NP_948613.1 39936337 2691622 complement(3691858..3692388) 1 NC_005296.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 3692388 nusG 2691622 nusG Rhodopseudomonas palustris CGA009 transcription antitermination protein NusG NP_948613.1 3691858 R 258594 CDS NP_948614.1 39936338 2690276 complement(3692405..3692656) 1 NC_005296.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 3692656 secE 2690276 secE Rhodopseudomonas palustris CGA009 preprotein translocase subunit SecE NP_948614.1 3692405 R 258594 CDS NP_948615.1 39936339 2691770 complement(3692921..3693769) 1 NC_005296.1 tonB protein 3693769 2691770 RPA3276 Rhodopseudomonas palustris CGA009 tonB protein NP_948615.1 3692921 R 258594 CDS NP_948616.1 39936340 2689127 complement(3693766..3694215) 1 NC_005296.1 enterochelin uptake protein ExbD 3694215 exbD 2689127 exbD Rhodopseudomonas palustris CGA009 enterochelin uptake protein ExbD NP_948616.1 3693766 R 258594 CDS NP_948617.1 39936341 2691722 complement(3694230..3695165) 1 NC_005296.1 enterochelin uptake protein ExbB 3695165 exbB 2691722 exbB Rhodopseudomonas palustris CGA009 enterochelin uptake protein ExbB NP_948617.1 3694230 R 258594 CDS NP_948618.1 39936342 2691701 complement(3695162..3695845) 1 NC_005296.1 iron-starvation protein 3695845 pigA 2691701 pigA Rhodopseudomonas palustris CGA009 iron-starvation protein NP_948618.1 3695162 R 258594 CDS NP_948619.1 39936343 2690253 complement(3695950..3699525) 1 NC_005296.1 heme receptor 3699525 hasR 2690253 hasR Rhodopseudomonas palustris CGA009 heme receptor NP_948619.1 3695950 R 258594 CDS NP_948620.1 39936344 2689973 complement(3699586..3700551) 1 NC_005296.1 iron siderophore sensor protein FecR 3700551 2689973 RPA3281 Rhodopseudomonas palustris CGA009 iron siderophore sensor protein FecR NP_948620.1 3699586 R 258594 CDS NP_948621.1 39936345 2690240 complement(3700694..3701215) 1 NC_005296.1 RNA polymerase ECF-type sigma factor FecI 3701215 2690240 RPA3282 Rhodopseudomonas palustris CGA009 RNA polymerase ECF-type sigma factor FecI NP_948621.1 3700694 R 258594 CDS NP_948622.1 39936346 2690208 complement(3702061..3703251) 1 NC_005296.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 3703251 tuf 2690208 tuf Rhodopseudomonas palustris CGA009 elongation factor Tu NP_948622.1 3702061 R 258594 CDS NP_948623.1 39936347 2690180 3703437..3704660 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-lactamase 3704660 2690180 RPA3284 Rhodopseudomonas palustris CGA009 beta-lactamase NP_948623.1 3703437 D 258594 CDS NP_948624.1 39936348 2690161 complement(3704783..3705550) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; dehydrogenase 3705550 2690161 RPA3285 Rhodopseudomonas palustris CGA009 dehydrogenase NP_948624.1 3704783 R 258594 CDS NP_948625.1 39936349 2690144 complement(3705733..3706488) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphoglycerate mutase 3706488 2690144 RPA3286 Rhodopseudomonas palustris CGA009 phosphoglycerate mutase NP_948625.1 3705733 R 258594 CDS NP_948626.1 39936350 2690136 3706645..3707430 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 3707430 2690136 RPA3287 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_948626.1 3706645 D 258594 CDS NP_948627.1 39936351 2690115 complement(3707777..3708835) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; aminoglycoside phosphotransferase 3708835 2690115 RPA3288 Rhodopseudomonas palustris CGA009 aminoglycoside phosphotransferase NP_948627.1 3707777 R 258594 CDS NP_948628.1 39936352 2690108 complement(3708987..3710219) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 3710219 2690108 RPA3289 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_948628.1 3708987 R 258594 CDS NP_948629.1 39936353 2690084 3710464..3711126 1 NC_005296.1 TetR family transcriptional regulator 3711126 2690084 RPA3290 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_948629.1 3710464 D 258594 CDS NP_948630.1 39936354 2690063 complement(3711156..3712817) 1 NC_005296.1 membrane transporter 3712817 2690063 RPA3291 Rhodopseudomonas palustris CGA009 membrane transporter NP_948630.1 3711156 R 258594 CDS NP_948631.1 39936355 2691240 complement(3713027..3713293) 1 NC_005296.1 hypothetical protein 3713293 2691240 RPA3292 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948631.1 3713027 R 258594 CDS NP_948632.1 39936356 2691230 complement(3713619..3714371) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter ATP-binding protein 3714371 2691230 RPA3293 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_948632.1 3713619 R 258594 CDS NP_948633.1 39936357 2691209 complement(3714368..3715138) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter ATP-binding protein 3715138 2691209 RPA3294 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_948633.1 3714368 R 258594 CDS NP_948634.1 39936358 2690497 complement(3715135..3716358) 1 NC_005296.1 inner-membrane translocator 3716358 2690497 RPA3295 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_948634.1 3715135 R 258594 CDS NP_948635.1 39936359 2691196 complement(3716363..3717370) 1 NC_005296.1 inner-membrane translocator 3717370 2691196 RPA3296 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_948635.1 3716363 R 258594 CDS NP_948636.1 39936360 2691395 complement(3717617..3718969) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino-acid ABC transporter substrate-binding protein 3718969 2691395 RPA3297 Rhodopseudomonas palustris CGA009 branched chain amino-acid ABC transporter substrate-binding protein NP_948636.1 3717617 R 258594 CDS NP_948637.1 39936361 2691137 complement(3719415..3720800) 1 NC_005296.1 hypothetical protein 3720800 2691137 RPA3298 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948637.1 3719415 R 258594 CDS NP_948638.1 39936362 2691125 complement(3720964..3722520) 1 NC_005296.1 long-chain-fatty-acid CoA ligase 3722520 2691125 RPA3299 Rhodopseudomonas palustris CGA009 long-chain-fatty-acid CoA ligase NP_948638.1 3720964 R 258594 CDS NP_948639.1 39936363 2690484 complement(3722438..3723184) 1 NC_005296.1 TetR family transcriptional regulator 3723184 2690484 RPA3300 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_948639.1 3722438 R 258594 CDS NP_948640.1 39936364 2690477 3723347..3724531 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; lipid-transfer protein 3724531 2690477 RPA3301 Rhodopseudomonas palustris CGA009 lipid-transfer protein NP_948640.1 3723347 D 258594 CDS NP_948641.1 39936365 2690467 3724542..3724988 1 NC_005296.1 hypothetical protein 3724988 2690467 RPA3302 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948641.1 3724542 D 258594 CDS NP_948642.1 39936366 2691095 3724985..3725410 1 NC_005296.1 acyl dehydratase 3725410 2691095 RPA3303 Rhodopseudomonas palustris CGA009 acyl dehydratase NP_948642.1 3724985 D 258594 CDS NP_948643.1 39936367 2691087 3725434..3726261 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-oxoacyl-ACP reductase 3726261 fabG3 2691087 fabG3 Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP reductase NP_948643.1 3725434 D 258594 CDS NP_948644.1 39936368 2691080 3726282..3727052 1 NC_005296.1 CTG start codon; enoyl-CoA hydratase 3727052 paaG2 2691080 paaG2 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_948644.1 3726282 D 258594 CDS NP_948645.1 39936369 2693085 3727317..3728423 1 NC_005296.1 nitrite reductase major outer membrane copper-containing protein 3728423 nirK1 2693085 nirK1 Rhodopseudomonas palustris CGA009 nitrite reductase major outer membrane copper-containing protein NP_948645.1 3727317 D 258594 CDS NP_948646.1 39936370 2691076 complement(3728453..3729235) 1 NC_005296.1 exonuclease III 3729235 xthA3 2691076 xthA3 Rhodopseudomonas palustris CGA009 exonuclease III NP_948646.1 3728453 R 258594 CDS NP_948647.1 39936371 2690049 3729714..3730223 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3730223 2690049 RPA3308 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948647.1 3729714 D 258594 CDS NP_948648.1 39936372 2691038 3730238..3730804 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3730804 2691038 RPA3309 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948648.1 3730238 D 258594 CDS NP_948649.1 39936373 2691035 3730948..3733065 1 NC_005296.1 catalase 3733065 katE 2691035 katE Rhodopseudomonas palustris CGA009 catalase NP_948649.1 3730948 D 258594 CDS NP_948650.1 39936374 2691039 3733281..3735482 1 NC_005296.1 glycosyl hydrolase 3735482 2691039 RPA3311 Rhodopseudomonas palustris CGA009 glycosyl hydrolase NP_948650.1 3733281 D 258594 CDS NP_948651.1 39936375 2691009 3735641..3736489 1 NC_005296.1 transglutaminase 3736489 2691009 RPA3312 Rhodopseudomonas palustris CGA009 transglutaminase NP_948651.1 3735641 D 258594 CDS NP_948652.1 39936376 2692549 complement(3736702..3736914) 1 NC_005296.1 hypothetical protein 3736914 2692549 RPA3313 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948652.1 3736702 R 258594 CDS NP_948653.1 39936377 2690462 complement(3736985..3738184) 1 NC_005296.1 DegP protease 3738184 degP 2690462 degP Rhodopseudomonas palustris CGA009 DegP protease NP_948653.1 3736985 R 258594 CDS NP_948654.1 39936378 2690981 3738485..3739159 1 NC_005296.1 protease 3739159 2690981 RPA3315 Rhodopseudomonas palustris CGA009 protease NP_948654.1 3738485 D 258594 CDS NP_948655.1 39936379 2693003 3740366..3743506 1 NC_005296.1 chemotaxis cheB/cheR fusion protein 3743506 2693003 RPA3316 Rhodopseudomonas palustris CGA009 chemotaxis cheB/cheR fusion protein NP_948655.1 3740366 D 258594 CDS NP_948656.1 39936380 2692998 complement(3743574..3743972) 1 NC_005296.1 hypothetical protein 3743972 2692998 RPA3317 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948656.1 3743574 R 258594 CDS NP_948657.1 39936381 2692987 complement(3743984..3744712) 1 NC_005296.1 Crp/Fnr family transcriptional regulator 3744712 2692987 RPA3318 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_948657.1 3743984 R 258594 CDS NP_948658.1 39936382 2692969 3744910..3745329 1 NC_005296.1 hypothetical protein 3745329 2692969 RPA3319 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948658.1 3744910 D 258594 CDS NP_948659.1 39936383 2692955 3745839..3746519 1 NC_005296.1 hypothetical protein 3746519 2692955 RPA3320 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948659.1 3745839 D 258594 CDS NP_948660.1 39936384 2692926 complement(3746647..3748143) 1 NC_005296.1 phosphomannomutase 3748143 algC 2692926 algC Rhodopseudomonas palustris CGA009 phosphomannomutase NP_948660.1 3746647 R 258594 CDS NP_948661.1 39936385 2692907 complement(3748190..3749626) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; mannose-1-phosphate guanylyltransferase 3749626 manC 2692907 manC Rhodopseudomonas palustris CGA009 mannose-1-phosphate guanylyltransferase NP_948661.1 3748190 R 258594 CDS NP_948662.1 39936386 2692889 complement(3749863..3751635) 1 NC_005296.1 hypothetical protein 3751635 2692889 RPA3323 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948662.1 3749863 R 258594 CDS NP_948663.1 39936387 2692862 complement(3751977..3752846) 1 NC_005296.1 hypothetical protein 3752846 2692862 RPA3324 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948663.1 3751977 R 258594 CDS NP_948664.1 39936388 2692816 3753666..3754148 1 NC_005296.1 hypothetical protein 3754148 2692816 RPA3325 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948664.1 3753666 D 258594 CDS NP_948665.1 39936389 2692852 3754537..3755022 1 NC_005296.1 hypothetical protein 3755022 2692852 RPA3326 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948665.1 3754537 D 258594 CDS NP_948666.1 39936390 2692827 3755308..3755592 1 NC_005296.1 hypothetical protein 3755592 2692827 RPA3327 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948666.1 3755308 D 258594 CDS NP_948667.1 39936391 2692782 complement(3755628..3756044) 1 NC_005296.1 XRE family transcriptional regulator 3756044 2692782 RPA3328 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_948667.1 3755628 R 258594 CDS NP_948668.1 39936392 2692746 complement(3756423..3758174) 1 NC_005296.1 hypothetical protein 3758174 2692746 RPA3329 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948668.1 3756423 R 258594 CDS NP_948669.1 39936393 2692743 3758733..3759116 1 NC_005296.1 hypothetical protein 3759116 2692743 RPA3330 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948669.1 3758733 D 258594 CDS NP_948670.1 39936394 2692714 3759101..3759631 1 NC_005296.1 hypothetical protein 3759631 2692714 RPA3331 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948670.1 3759101 D 258594 CDS NP_948671.1 39936395 2692708 3759664..3759948 1 NC_005296.1 hypothetical protein 3759948 2692708 RPA3332 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948671.1 3759664 D 258594 CDS NP_948672.1 39936396 2692674 3760005..3760880 1 NC_005296.1 curli production assembly/transport component csgg 3760880 csgG 2692674 csgG Rhodopseudomonas palustris CGA009 curli production assembly/transport component csgg NP_948672.1 3760005 D 258594 CDS NP_948673.1 39936397 2692668 complement(3761133..3761522) 1 NC_005296.1 hypothetical protein 3761522 2692668 RPA3334 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948673.1 3761133 R 258594 CDS NP_948674.1 39936398 2692646 complement(3761657..3761998) 1 NC_005296.1 hypothetical protein 3761998 2692646 RPA3335 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948674.1 3761657 R 258594 CDS NP_948675.1 39936399 2692640 complement(3762564..3763271) 1 NC_005296.1 lipopeptide antibiotics iturin a biosynthesis protein 3763271 2692640 RPA3336 Rhodopseudomonas palustris CGA009 lipopeptide antibiotics iturin a biosynthesis protein NP_948675.1 3762564 R 258594 CDS NP_948676.1 39936400 2692613 complement(3763287..3764387) 1 NC_005296.1 hypothetical protein 3764387 2692613 RPA3337 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948676.1 3763287 R 258594 CDS NP_948677.1 39936401 2692588 complement(3764459..3766768) 1 NC_005296.1 condensation domain-containing protein 3766768 2692588 RPA3338 Rhodopseudomonas palustris CGA009 condensation domain-containing protein NP_948677.1 3764459 R 258594 CDS NP_948678.1 39936402 2691318 complement(3766765..3774813) 1 NC_005296.1 polyketide synthase 3774813 mcyE 2691318 mcyE Rhodopseudomonas palustris CGA009 polyketide synthase NP_948678.1 3766765 R 258594 CDS NP_948679.1 39936403 2691475 complement(3774836..3776749) 1 NC_005296.1 peptide synthetase (fragment) 3776749 2691475 RPA3340 Rhodopseudomonas palustris CGA009 peptide synthetase (fragment) NP_948679.1 3774836 R 258594 CDS NP_948680.1 39936404 2691566 3777237..3778376 1 NC_005296.1 acetyltransferase 3778376 2691566 RPA3341 Rhodopseudomonas palustris CGA009 acetyltransferase NP_948680.1 3777237 D 258594 CDS NP_948681.1 39936405 2690038 3778452..3780284 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glycosyl hydrolase 3780284 2690038 RPA3342 Rhodopseudomonas palustris CGA009 glycosyl hydrolase NP_948681.1 3778452 D 258594 CDS NP_948682.1 39936406 2689997 3780347..3781483 1 NC_005296.1 mannosyltransferase 3781483 mtfB 2689997 mtfB Rhodopseudomonas palustris CGA009 mannosyltransferase NP_948682.1 3780347 D 258594 CDS NP_948683.1 39936407 2689988 3781605..3783353 1 NC_005296.1 oxidoreductase 3783353 2689988 RPA3344 Rhodopseudomonas palustris CGA009 oxidoreductase NP_948683.1 3781605 D 258594 CDS NP_948684.1 39936408 2689986 complement(3783348..3784790) 1 NC_005296.1 hypothetical protein 3784790 2689986 RPA3345 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948684.1 3783348 R 258594 CDS NP_948685.1 39936409 2690947 3785284..3786384 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; mannosyltransferase 3786384 2690947 RPA3346 Rhodopseudomonas palustris CGA009 mannosyltransferase NP_948685.1 3785284 D 258594 CDS NP_948686.1 39936410 2690933 3786407..3787297 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glycosyltransferase 3787297 2690933 RPA3347 Rhodopseudomonas palustris CGA009 glycosyltransferase NP_948686.1 3786407 D 258594 CDS NP_948687.1 39936411 2690926 complement(3787401..3788894) 1 NC_005296.1 polysaccharide export protein 3788894 2690926 RPA3348 Rhodopseudomonas palustris CGA009 polysaccharide export protein NP_948687.1 3787401 R 258594 CDS NP_948688.1 39936412 2691412 complement(3789036..3790172) 1 NC_005296.1 exopolysaccharide biosynthesis protein 3790172 2691412 RPA3349 Rhodopseudomonas palustris CGA009 exopolysaccharide biosynthesis protein NP_948688.1 3789036 R 258594 CDS NP_948689.1 39936413 2690944 3790782..3791927 1 NC_005296.1 aminotransferase 3791927 2690944 RPA3350 Rhodopseudomonas palustris CGA009 aminotransferase NP_948689.1 3790782 D 258594 CDS NP_948690.1 39936414 2690958 3792003..3792809 1 NC_005296.1 glycosyl transferase family protein 3792809 2690958 RPA3351 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_948690.1 3792003 D 258594 CDS NP_948691.1 39936415 2689991 3792840..3793958 1 NC_005296.1 glycosyltransferase 3793958 2689991 RPA3352 Rhodopseudomonas palustris CGA009 glycosyltransferase NP_948691.1 3792840 D 258594 CDS NP_948692.1 39936416 2689957 complement(3793955..3794671) 1 NC_005296.1 serine/threonine protein phosphatase 3794671 2689957 RPA3353 Rhodopseudomonas palustris CGA009 serine/threonine protein phosphatase NP_948692.1 3793955 R 258594 CDS NP_948693.1 39936417 2689830 3794981..3795619 1 NC_005296.1 hypothetical protein 3795619 2689830 RPA3354 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948693.1 3794981 D 258594 CDS NP_948694.1 39936418 2690003 3795678..3798026 1 NC_005296.1 exopolysaccharide polymerization protein 3798026 2690003 RPA3355 Rhodopseudomonas palustris CGA009 exopolysaccharide polymerization protein NP_948694.1 3795678 D 258594 CDS NP_948695.1 39936419 2691441 3798083..3798739 1 NC_005296.1 hypothetical protein 3798739 2691441 RPA3356 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948695.1 3798083 D 258594 CDS NP_948696.1 39936420 2691557 3799641..3800315 1 NC_005296.1 glycosyltransferase 3800315 2691557 RPA3357 Rhodopseudomonas palustris CGA009 glycosyltransferase NP_948696.1 3799641 D 258594 CDS NP_948697.1 39936421 2692543 3801039..3801755 1 NC_005296.1 hypothetical protein 3801755 2692543 RPA3358 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948697.1 3801039 D 258594 CDS NP_948698.1 39936422 2692605 complement(3801814..3803247) 1 NC_005296.1 O-antigen polymerase 3803247 2692605 RPA3359 Rhodopseudomonas palustris CGA009 O-antigen polymerase NP_948698.1 3801814 R 258594 CDS NP_948699.1 39936423 2692628 complement(3803244..3804464) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; capsule polysaccharide export outer membrane protein 3804464 pssN 2692628 pssN Rhodopseudomonas palustris CGA009 capsule polysaccharide export outer membrane protein NP_948699.1 3803244 R 258594 CDS NP_948700.1 39936424 2692655 3805215..3805466 1 NC_005296.1 hypothetical protein 3805466 2692655 RPA3361 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948700.1 3805215 D 258594 CDS NP_948701.1 39936425 2692661 3805695..3805976 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3805976 2692661 RPA3362 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948701.1 3805695 D 258594 CDS NP_948702.1 39936426 2692701 complement(3806489..3806956) 1 NC_005296.1 hypothetical protein 3806956 2692701 RPA3363 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948702.1 3806489 R 258594 CDS NP_948703.1 39936427 2692744 3807406..3808233 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; RNA methyltransferase TrmH group 3 3808233 rrm1 2692744 rrm1 Rhodopseudomonas palustris CGA009 RNA methyltransferase TrmH group 3 NP_948703.1 3807406 D 258594 CDS NP_948704.1 39936428 2692761 complement(3808306..3808806) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3808806 2692761 RPA3365 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948704.1 3808306 R 258594 CDS NP_948705.1 39936429 2692815 complement(3808864..3809337) 1 NC_005296.1 hypothetical protein 3809337 2692815 RPA3366 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948705.1 3808864 R 258594 CDS NP_948706.1 39936430 2692863 complement(3809655..3810125) 1 NC_005296.1 photopigment and puc activator 3810125 2692863 RPA3367 Rhodopseudomonas palustris CGA009 photopigment and puc activator NP_948706.1 3809655 R 258594 CDS NP_948707.1 39936431 2692884 complement(3810250..3810849) 1 NC_005296.1 hypothetical protein 3810849 2692884 RPA3368 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948707.1 3810250 R 258594 CDS NP_948708.1 39936432 2692899 3811211..3811423 1 NC_005296.1 hypothetical protein 3811423 2692899 RPA3369 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948708.1 3811211 D 258594 CDS NP_948709.1 39936433 2692914 3811538..3812215 1 NC_005296.1 hypothetical protein 3812215 2692914 RPA3370 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948709.1 3811538 D 258594 CDS NP_948710.1 39936434 2692932 complement(3812381..3813103) 1 NC_005296.1 outer membrane protein 3813103 2692932 RPA3371 Rhodopseudomonas palustris CGA009 outer membrane protein NP_948710.1 3812381 R 258594 CDS NP_948711.1 39936435 2692963 complement(3813283..3813702) 1 NC_005296.1 hypothetical protein 3813702 2692963 RPA3372 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948711.1 3813283 R 258594 CDS NP_948712.1 39936436 2692988 complement(3813795..3814091) 1 NC_005296.1 hypothetical protein 3814091 2692988 RPA3373 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948712.1 3813795 R 258594 CDS NP_948713.1 39936437 2693001 3814236..3815222 1 NC_005296.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 3815222 ppnK 2693001 ppnK Rhodopseudomonas palustris CGA009 inorganic polyphosphate/ATP-NAD kinase NP_948713.1 3814236 D 258594 CDS NP_948714.1 39936438 2693015 complement(3815306..3815749) 1 NC_005296.1 hypothetical protein 3815749 2693015 RPA3375 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948714.1 3815306 R 258594 CDS NP_948715.1 39936439 2690984 complement(3815742..3819017) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DNA methyltransferase 3819017 2690984 RPA3376 Rhodopseudomonas palustris CGA009 DNA methyltransferase NP_948715.1 3815742 R 258594 CDS NP_948716.1 39936440 2691001 complement(3819486..3820190) 1 NC_005296.1 3-oxoacyl-acyl carrier protein reductase 3820190 2691001 RPA3377 Rhodopseudomonas palustris CGA009 3-oxoacyl-acyl carrier protein reductase NP_948716.1 3819486 R 258594 CDS NP_948717.1 39936441 2691003 complement(3820668..3820844) 1 NC_005296.1 hypothetical protein 3820844 2691003 RPA3378 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948717.1 3820668 R 258594 CDS NP_948718.1 39936442 2691016 complement(3821212..3821406) 1 NC_005296.1 hypothetical protein 3821406 2691016 RPA3379 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948718.1 3821212 R 258594 CDS NP_948719.1 39936443 2691020 3821616..3822161 1 NC_005296.1 chemotaxis protein CheY 3822161 2691020 RPA3380 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_948719.1 3821616 D 258594 CDS NP_948720.1 39936444 2693056 3822179..3822769 1 NC_005296.1 Hpt domain-containing protein 3822769 2693056 RPA3381 Rhodopseudomonas palustris CGA009 Hpt domain-containing protein NP_948720.1 3822179 D 258594 CDS NP_948721.1 39936445 2691026 complement(3823066..3824235) 1 NC_005296.1 hypothetical protein 3824235 2691026 RPA3382 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948721.1 3823066 R 258594 CDS NP_948722.1 39936446 2691037 3824681..3825466 1 NC_005296.1 taurine transport system permease 3825466 2691037 RPA3383 Rhodopseudomonas palustris CGA009 taurine transport system permease NP_948722.1 3824681 D 258594 CDS NP_948723.1 39936447 2691052 3825463..3826494 1 NC_005296.1 nitrate/sulfonate/bicarbonate ABC transporter periplasmic-binding protein 3826494 2691052 RPA3384 Rhodopseudomonas palustris CGA009 nitrate/sulfonate/bicarbonate ABC transporter periplasmic-binding protein NP_948723.1 3825463 D 258594 CDS NP_948724.1 39936448 2691057 3826491..3827327 1 NC_005296.1 nitrate transport system ATP-binding protein 3827327 nrtC2 2691057 nrtC2 Rhodopseudomonas palustris CGA009 nitrate transport system ATP-binding protein NP_948724.1 3826491 D 258594 CDS NP_948725.1 39936449 2691388 3827388..3829061 1 NC_005296.1 amidohydrolase 3829061 2691388 RPA3386 Rhodopseudomonas palustris CGA009 amidohydrolase NP_948725.1 3827388 D 258594 CDS NP_948726.1 39936450 2693092 3829071..3830087 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; LysR family transcriptional regulator 3830087 2693092 RPA3387 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_948726.1 3829071 D 258594 CDS NP_948727.1 39936451 2693087 complement(3830094..3831134) 1 NC_005296.1 hypothetical protein 3831134 2693087 RPA3388 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948727.1 3830094 R 258594 CDS NP_948728.1 39936452 2691093 3831331..3832029 1 NC_005296.1 hypothetical protein 3832029 2691093 RPA3389 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948728.1 3831331 D 258594 CDS NP_948729.1 39936453 2691094 complement(3832039..3832494) 1 NC_005296.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 3832494 hisI 2691094 hisI Rhodopseudomonas palustris CGA009 phosphoribosyl-AMP cyclohydrolase NP_948729.1 3832039 R 258594 CDS NP_948730.1 39936454 2690476 complement(3832523..3833212) 1 NC_005296.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 3833212 folE 2690476 folE Rhodopseudomonas palustris CGA009 GTP cyclohydrolase I NP_948730.1 3832523 R 258594 CDS NP_948731.1 39936455 2691122 3833480..3833932 1 NC_005296.1 nifU-like protein 3833932 2691122 RPA3392 Rhodopseudomonas palustris CGA009 nifU-like protein NP_948731.1 3833480 D 258594 CDS NP_948732.1 39936456 2691133 complement(3834115..3835005) 1 NC_005296.1 hypothetical protein 3835005 2691133 RPA3393 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948732.1 3834115 R 258594 CDS NP_948733.1 39936457 2691141 3835177..3835635 1 NC_005296.1 hypothetical protein 3835635 2691141 RPA3394 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948733.1 3835177 D 258594 CDS NP_948734.1 39936458 2691151 complement(3835622..3836413) 1 NC_005296.1 hypothetical protein 3836413 2691151 RPA3395 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948734.1 3835622 R 258594 CDS NP_948735.1 39936459 2691185 complement(3836526..3837653) 1 NC_005296.1 hypothetical protein 3837653 2691185 RPA3396 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948735.1 3836526 R 258594 CDS NP_948736.1 39936460 2691390 complement(3837655..3838113) 1 NC_005296.1 hypothetical protein 3838113 2691390 RPA3397 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948736.1 3837655 R 258594 CDS NP_948737.1 39936461 2691201 complement(3838266..3839531) 1 NC_005296.1 arsenite permease 3839531 2691201 RPA3398 Rhodopseudomonas palustris CGA009 arsenite permease NP_948737.1 3838266 R 258594 CDS NP_948738.1 39936462 2691247 3839779..3840006 1 NC_005296.1 cold shock DNA binding protein 3840006 cspA4 2691247 cspA4 Rhodopseudomonas palustris CGA009 cold shock DNA binding protein NP_948738.1 3839779 D 258594 CDS NP_948739.1 39936463 2691251 3840107..3840355 1 NC_005296.1 hypothetical protein 3840355 2691251 RPA3400 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948739.1 3840107 D 258594 CDS NP_948740.1 39936464 2691245 3840399..3840596 1 NC_005296.1 hypothetical protein 3840596 2691245 RPA3401 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948740.1 3840399 D 258594 CDS NP_948741.1 39936465 2690068 complement(3840586..3841008) 1 NC_005296.1 hypothetical protein 3841008 2690068 RPA3402 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948741.1 3840586 R 258594 CDS NP_948742.1 39936466 2690112 complement(3841013..3841645) 1 NC_005296.1 TetR family transcriptional regulator 3841645 2690112 RPA3403 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_948742.1 3841013 R 258594 CDS NP_948743.1 39936467 2690121 3841743..3842393 1 NC_005296.1 O-methyltransferase 3842393 2690121 RPA3404 Rhodopseudomonas palustris CGA009 O-methyltransferase NP_948743.1 3841743 D 258594 CDS NP_948744.1 39936468 2690123 complement(3842755..3843873) 1 NC_005296.1 transporter 3843873 2690123 RPA3405 Rhodopseudomonas palustris CGA009 transporter NP_948744.1 3842755 R 258594 CDS NP_948745.1 39936469 2690143 3844183..3846159 1 NC_005296.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 3846159 thrS 2690143 thrS Rhodopseudomonas palustris CGA009 threonyl-tRNA synthetase NP_948745.1 3844183 D 258594 CDS NP_948746.1 39936470 2690178 complement(3846441..3847019) 1 NC_005296.1 hypothetical protein 3847019 2690178 RPA3407 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948746.1 3846441 R 258594 CDS NP_948747.1 39936471 2690196 3847356..3847865 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitroreductase family protein 3847865 2690196 RPA3408 Rhodopseudomonas palustris CGA009 nitroreductase family protein NP_948747.1 3847356 D 258594 CDS NP_948748.1 39936472 2690210 complement(3847917..3849791) 1 NC_005296.1 metal-dependent hydrolase 3849791 2690210 RPA3409 Rhodopseudomonas palustris CGA009 metal-dependent hydrolase NP_948748.1 3847917 R 258594 CDS NP_948749.1 39936473 2690221 complement(3849886..3852360) 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 3852360 2690221 RPA3410 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_948749.1 3849886 R 258594 CDS NP_948750.1 39936474 2690224 complement(3852571..3853734) 1 NC_005296.1 hypothetical protein 3853734 2690224 RPA3411 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948750.1 3852571 R 258594 CDS NP_948751.1 39936475 2689775 3853863..3854894 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; patatin-like phospholipase domain-containing protein 3854894 2689775 RPA3412 Rhodopseudomonas palustris CGA009 patatin-like phospholipase domain-containing protein NP_948751.1 3853863 D 258594 CDS NP_948752.1 39936476 2689369 complement(3855126..3856241) 1 NC_005296.1 hypothetical protein 3856241 2689369 RPA3413 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948752.1 3855126 R 258594 CDS NP_948753.1 39936477 2690259 complement(3856270..3858531) 1 NC_005296.1 hydroxamate-type ferrisiderophore receptor 3858531 2690259 RPA3414 Rhodopseudomonas palustris CGA009 hydroxamate-type ferrisiderophore receptor NP_948753.1 3856270 R 258594 CDS NP_948754.1 39936478 2691702 3858681..3859316 1 NC_005296.1 TetR family transcriptional regulator 3859316 2691702 RPA3415 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_948754.1 3858681 D 258594 CDS NP_948755.1 39936479 2691723 complement(3859338..3859766) 1 NC_005296.1 hypothetical protein 3859766 2691723 RPA3416 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948755.1 3859338 R 258594 CDS NP_948756.1 39936480 2691740 complement(3860004..3860774) 1 NC_005296.1 rhomboid-like protein 3860774 2691740 RPA3417 Rhodopseudomonas palustris CGA009 rhomboid-like protein NP_948756.1 3860004 R 258594 CDS NP_948757.1 39936481 2689169 3861259..3861828 1 NC_005296.1 hypothetical protein 3861828 2689169 RPA3418 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948757.1 3861259 D 258594 CDS NP_948758.1 39936482 2689168 complement(3861798..3862562) 1 NC_005296.1 Crp/Fnr family transcriptional regulator 3862562 2689168 RPA3419 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_948758.1 3861798 R 258594 CDS NP_948759.1 39936483 2691785 3863062..3863613 1 NC_005296.1 type IV pilus assembly PilZ 3863613 2691785 RPA3420 Rhodopseudomonas palustris CGA009 type IV pilus assembly PilZ NP_948759.1 3863062 D 258594 CDS NP_948760.1 39936484 2690274 3863945..3864565 1 NC_005296.1 transglutaminase-like cysteine peptidase BTLCP 3864565 2690274 RPA3421 Rhodopseudomonas palustris CGA009 transglutaminase-like cysteine peptidase BTLCP NP_948760.1 3863945 D 258594 CDS NP_948761.1 39936485 2689162 complement(3864703..3865290) 1 NC_005296.1 MarR family transcriptional regulator 3865290 2689162 RPA3422 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_948761.1 3864703 R 258594 CDS NP_948762.1 39936486 2691513 3865814..3867313 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3867313 2691513 RPA3423 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948762.1 3865814 D 258594 CDS NP_948763.1 39936487 2691821 3867737..3867904 1 NC_005296.1 hypothetical protein 3867904 2691821 RPA3424 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948763.1 3867737 D 258594 CDS NP_948764.1 39936488 2690509 complement(3867936..3868466) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hexapeptide repeat-containing transferase 3868466 2690509 RPA3425 Rhodopseudomonas palustris CGA009 hexapeptide repeat-containing transferase NP_948764.1 3867936 R 258594 CDS NP_948765.1 39936489 2691833 complement(3868526..3868858) 1 NC_005296.1 hypothetical protein 3868858 2691833 RPA3426 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948765.1 3868526 R 258594 CDS NP_948766.1 39936490 2691864 3869049..3869756 1 NC_005296.1 hypothetical protein 3869756 2691864 RPA3427 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948766.1 3869049 D 258594 CDS NP_948767.1 39936491 2689385 complement(3869773..3870003) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3870003 2689385 RPA3428 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948767.1 3869773 R 258594 CDS NP_948768.1 39936492 2692532 complement(3870160..3870987) 1 NC_005296.1 serine O-acetyltransferase 3870987 cysE2 2692532 cysE2 Rhodopseudomonas palustris CGA009 serine O-acetyltransferase NP_948768.1 3870160 R 258594 CDS NP_948769.1 39936493 2691916 complement(3871208..3871963) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alpha/beta hydrolase 3871963 2691916 RPA3430 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase NP_948769.1 3871208 R 258594 CDS NP_948770.1 39936494 2691936 complement(3872133..3873281) 1 NC_005296.1 hypothetical protein 3873281 2691936 RPA3431 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948770.1 3872133 R 258594 CDS NP_948771.1 39936495 2690515 3873487..3873732 1 NC_005296.1 hypothetical protein 3873732 2690515 RPA3432 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948771.1 3873487 D 258594 CDS NP_948772.1 39936496 2690313 3873751..3874944 1 NC_005296.1 salicylate 1-monooxygenase 3874944 2690313 RPA3433 Rhodopseudomonas palustris CGA009 salicylate 1-monooxygenase NP_948772.1 3873751 D 258594 CDS NP_948773.1 39936497 2690564 3875337..3875981 1 NC_005296.1 universal stress protein 3875981 2690564 RPA3434 Rhodopseudomonas palustris CGA009 universal stress protein NP_948773.1 3875337 D 258594 CDS NP_948774.1 39936498 2690343 3876078..3876938 1 NC_005296.1 glycosyl transferase family protein 3876938 2690343 RPA3435 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_948774.1 3876078 D 258594 CDS NP_948775.1 39936499 2690578 3876964..3877473 1 NC_005296.1 N-acetyltransferase GCN5 3877473 2690578 RPA3436 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_948775.1 3876964 D 258594 CDS NP_948776.1 39936500 2689980 3878064..3879167 1 NC_005296.1 hypothetical protein 3879167 2689980 RPA3437 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948776.1 3878064 D 258594 CDS NP_948777.1 39936501 2691948 complement(3879239..3879502) 1 NC_005296.1 hypothetical protein 3879502 2691948 RPA3438 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948777.1 3879239 R 258594 CDS NP_948778.1 39936502 2691985 3880205..3881392 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydrolase 3881392 2691985 RPA3439 Rhodopseudomonas palustris CGA009 hydrolase NP_948778.1 3880205 D 258594 CDS NP_948779.1 39936503 2692002 3881385..3882800 1 NC_005296.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3882800 2692002 RPA3440 Rhodopseudomonas palustris CGA009 amidase NP_948779.1 3881385 D 258594 CDS NP_948780.1 39936504 2690603 3882893..3883822 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3883822 2690603 RPA3441 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_948780.1 3882893 D 258594 CDS NP_948781.1 39936505 2690598 complement(3883848..3884624) 1 NC_005296.1 cyclase 3884624 2690598 RPA3442 Rhodopseudomonas palustris CGA009 cyclase NP_948781.1 3883848 R 258594 CDS NP_948782.1 39936506 2692024 complement(3884651..3885640) 1 NC_005296.1 isomerase/decarboxylase 3885640 2692024 RPA3443 Rhodopseudomonas palustris CGA009 isomerase/decarboxylase NP_948782.1 3884651 R 258594 CDS NP_948783.1 39936507 2690361 3885768..3886478 1 NC_005296.1 GntR family transcriptional regulator 3886478 2690361 RPA3444 Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_948783.1 3885768 D 258594 CDS NP_948784.1 39936508 2690642 complement(3886503..3888224) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; AMP-dependent synthetase/ligase 3888224 2690642 RPA3445 Rhodopseudomonas palustris CGA009 AMP-dependent synthetase/ligase NP_948784.1 3886503 R 258594 CDS NP_948785.1 39936509 2690659 complement(3888385..3889272) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-hydroxyisobutyrate dehydrogenase 3889272 2690659 RPA3446 Rhodopseudomonas palustris CGA009 3-hydroxyisobutyrate dehydrogenase NP_948785.1 3888385 R 258594 CDS NP_948786.1 39936510 2690690 complement(3889306..3890379) 1 NC_005296.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 3890379 2690690 RPA3447 Rhodopseudomonas palustris CGA009 3-hydroxyisobutyryl-CoA hydrolase NP_948786.1 3889306 R 258594 CDS NP_948787.1 39936511 2688996 complement(3890376..3891533) 1 NC_005296.1 acyl-CoA dehydrogenase 3891533 2688996 RPA3448 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_948787.1 3890376 R 258594 CDS NP_948788.1 39936512 2689014 complement(3891530..3891949) 1 NC_005296.1 twitching motility protein PilT 3891949 2689014 RPA3449 Rhodopseudomonas palustris CGA009 twitching motility protein PilT NP_948788.1 3891530 R 258594 CDS NP_948789.1 39936513 2689046 complement(3892228..3893724) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methylmalonate-semialdehyde dehydrogenase 3893724 2689046 RPA3450 Rhodopseudomonas palustris CGA009 methylmalonate-semialdehyde dehydrogenase NP_948789.1 3892228 R 258594 CDS NP_948790.1 39936514 2688993 complement(3893884..3894552) 1 NC_005296.1 TetR family transcriptional regulator 3894552 2688993 RPA3451 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_948790.1 3893884 R 258594 CDS NP_948791.1 39936515 2690369 complement(3894626..3895201) 1 NC_005296.1 phenylacetic acid degradation-like protein 3895201 2690369 RPA3452 Rhodopseudomonas palustris CGA009 phenylacetic acid degradation-like protein NP_948791.1 3894626 R 258594 CDS NP_948792.1 39936516 2688921 3895343..3896113 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3896113 2688921 RPA3453 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_948792.1 3895343 D 258594 CDS NP_948793.1 39936517 2692053 3896238..3897524 1 NC_005296.1 MFS family transporter 3897524 2692053 RPA3454 Rhodopseudomonas palustris CGA009 MFS family transporter NP_948793.1 3896238 D 258594 CDS NP_948794.1 39936518 2692064 complement(3897573..3899132) 1 NC_005296.1 methylmalonyl-CoA decarboxylase subunit alpha 3899132 2692064 RPA3455 Rhodopseudomonas palustris CGA009 methylmalonyl-CoA decarboxylase subunit alpha NP_948794.1 3897573 R 258594 CDS NP_948795.1 39936519 2689543 3900286..3900507 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; biotin/lipoyl attachment protein 3900507 2689543 RPA3457 Rhodopseudomonas palustris CGA009 biotin/lipoyl attachment protein NP_948795.1 3900286 D 258594 CDS NP_948796.1 39936520 2689969 3900691..3901851 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TRAP dicarboxylate family transporter subunit DctP 3901851 2689969 RPA3458 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctP NP_948796.1 3900691 D 258594 CDS NP_948797.1 39936521 2689717 3901879..3903945 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctM/Q 3903945 2689717 RPA3459 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctM/Q NP_948797.1 3901879 D 258594 CDS NP_948798.1 39936522 2689732 3904066..3904620 1 NC_005296.1 hypothetical protein 3904620 2689732 RPA3460 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948798.1 3904066 D 258594 CDS NP_948799.1 39936523 2692105 complement(3904676..3905041) 1 NC_005296.1 hypothetical protein 3905041 2692105 RPA3461 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948799.1 3904676 R 258594 CDS NP_948800.1 39936524 2692113 complement(3905038..3906252) 1 NC_005296.1 thiolase 3906252 2692113 RPA3462 Rhodopseudomonas palustris CGA009 thiolase NP_948800.1 3905038 R 258594 CDS NP_948801.1 39936525 2690708 complement(3906356..3907573) 1 NC_005296.1 hypothetical protein 3907573 2690708 RPA3463 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948801.1 3906356 R 258594 CDS NP_948802.1 39936526 2692491 3907766..3908650 1 NC_005296.1 hypothetical protein 3908650 2692491 RPA3464 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948802.1 3907766 D 258594 CDS NP_948803.1 39936527 2690741 complement(3908870..3910396) 1 NC_005296.1 long-chain-fatty-acid CoA ligase 3910396 2690741 RPA3465 Rhodopseudomonas palustris CGA009 long-chain-fatty-acid CoA ligase NP_948803.1 3908870 R 258594 CDS NP_948804.1 39936528 2690768 complement(3910417..3911586) 1 NC_005296.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3911586 2690768 RPA3466 Rhodopseudomonas palustris CGA009 acetyl-CoA acetyltransferase NP_948804.1 3910417 R 258594 CDS NP_948805.1 39936529 2692119 complement(3911835..3912899) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NAD-dependent epimerase/dehydratase 3912899 2692119 RPA3467 Rhodopseudomonas palustris CGA009 NAD-dependent epimerase/dehydratase NP_948805.1 3911835 R 258594 CDS NP_948806.1 39936530 2692120 complement(3913033..3913959) 1 NC_005296.1 sugar ABC transporter permease 3913959 2692120 RPA3468 Rhodopseudomonas palustris CGA009 sugar ABC transporter permease NP_948806.1 3913033 R 258594 CDS NP_948807.1 39936531 2692162 complement(3913952..3914905) 1 NC_005296.1 binding-protein-dependent transport system inner membrane protein 3914905 2692162 RPA3469 Rhodopseudomonas palustris CGA009 binding-protein-dependent transport system inner membrane protein NP_948807.1 3913952 R 258594 CDS NP_948808.1 39936532 2692183 complement(3915123..3916448) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sugar uptake ABC transporter periplasmic solute-binding protein 3916448 2692183 RPA3470 Rhodopseudomonas palustris CGA009 sugar uptake ABC transporter periplasmic solute-binding protein NP_948808.1 3915123 R 258594 CDS NP_948809.1 39936533 2692208 complement(3916525..3917589) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter ATP-binding protein 3917589 2692208 RPA3471 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_948809.1 3916525 R 258594 CDS NP_948810.1 39936534 2690382 3917826..3919634 1 NC_005296.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 3919634 ilvD1 2690382 ilvD1 Rhodopseudomonas palustris CGA009 dihydroxy-acid dehydratase NP_948810.1 3917826 D 258594 CDS NP_948811.1 39936535 2692229 3919768..3920502 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 3920502 ucpA 2692229 ucpA Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_948811.1 3919768 D 258594 CDS NP_948812.1 39936536 2692233 3920586..3921335 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 3921335 fabG4 2692233 fabG4 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_948812.1 3920586 D 258594 CDS NP_948813.1 39936537 2692238 complement(3921408..3922367) 1 NC_005296.1 transposase 3922367 2692238 RPA3475 Rhodopseudomonas palustris CGA009 transposase NP_948813.1 3921408 R 258594 CDS NP_948814.1 39936538 2692287 complement(3922797..3923591) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; energy transducer TonB 3923591 2692287 RPA3476 Rhodopseudomonas palustris CGA009 energy transducer TonB NP_948814.1 3922797 R 258594 CDS NP_948815.1 39936539 2690774 complement(3923696..3924145) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; enterochelin uptake protein ExbD 3924145 exbD5 2690774 exbD5 Rhodopseudomonas palustris CGA009 enterochelin uptake protein ExbD NP_948815.1 3923696 R 258594 CDS NP_948816.1 39936540 2692316 complement(3924149..3924853) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; enterochelin uptake protein ExbB 3924853 exbB5 2692316 exbB5 Rhodopseudomonas palustris CGA009 enterochelin uptake protein ExbB NP_948816.1 3924149 R 258594 CDS NP_948817.1 39936541 2690788 complement(3925057..3925746) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydroxylase 3925746 2690788 RPA3479 Rhodopseudomonas palustris CGA009 hydroxylase NP_948817.1 3925057 R 258594 CDS NP_948818.1 39936542 2690802 complement(3925772..3927973) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane receptor for iron transport 3927973 fiu 2690802 fiu Rhodopseudomonas palustris CGA009 outer membrane receptor for iron transport NP_948818.1 3925772 R 258594 CDS NP_948819.1 39936543 2692342 complement(3928437..3928679) 1 NC_005296.1 hypothetical protein 3928679 2692342 RPA3481 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948819.1 3928437 R 258594 CDS NP_948820.1 39936544 2690801 3929016..3930239 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3930239 2690801 RPA3482 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948820.1 3929016 D 258594 CDS NP_948821.1 39936545 2690836 3930242..3933379 1 NC_005296.1 RND efflux transporter 3933379 2690836 RPA3483 Rhodopseudomonas palustris CGA009 RND efflux transporter NP_948821.1 3930242 D 258594 CDS NP_948822.1 39936546 2690867 complement(3933422..3934063) 1 NC_005296.1 twitching motility protein PilT 3934063 2690867 RPA3484 Rhodopseudomonas palustris CGA009 twitching motility protein PilT NP_948822.1 3933422 R 258594 CDS NP_948823.1 39936547 2692399 complement(3934674..3935867) 1 NC_005296.1 racemase 3935867 2692399 RPA3485 Rhodopseudomonas palustris CGA009 racemase NP_948823.1 3934674 R 258594 CDS NP_948824.1 39936548 2692425 complement(3935977..3937188) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system substrate-binding protein 3937188 2692425 RPA3486 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system substrate-binding protein NP_948824.1 3935977 R 258594 CDS NP_948825.1 39936549 2692423 complement(3937437..3938051) 1 NC_005296.1 hypothetical protein 3938051 2692423 RPA3487 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948825.1 3937437 R 258594 CDS NP_948826.1 39936550 2690907 complement(3938057..3939562) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase S1C Do 3939562 2690907 RPA3488 Rhodopseudomonas palustris CGA009 peptidase S1C Do NP_948826.1 3938057 R 258594 CDS NP_948827.1 39936551 2692524 complement(3939777..3939977) 1 NC_005296.1 hypothetical protein 3939977 2692524 RPA3489 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948827.1 3939777 R 258594 CDS NP_948828.1 39936552 2690412 complement(3940220..3941146) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; HflC protein 3941146 hflC 2690412 hflC Rhodopseudomonas palustris CGA009 HflC protein NP_948828.1 3940220 R 258594 CDS NP_948829.1 39936553 2689765 complement(3941143..3942294) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; HflK protein 3942294 hflK 2689765 hflK Rhodopseudomonas palustris CGA009 HflK protein NP_948829.1 3941143 R 258594 CDS NP_948830.1 39936554 2688825 complement(3942439..3942981) 1 NC_005296.1 dihydrofolate reductase 3942981 dyr 2688825 dyr Rhodopseudomonas palustris CGA009 dihydrofolate reductase NP_948830.1 3942439 R 258594 CDS NP_948831.1 39936555 2692488 complement(3942978..3943772) 1 NC_005296.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 3943772 thyA 2692488 thyA Rhodopseudomonas palustris CGA009 thymidylate synthase NP_948831.1 3942978 R 258594 CDS NP_948832.1 39936556 2693474 complement(3943944..3944951) 1 NC_005296.1 tripartite tricarboxylate transport(TTT) family subunit TctC 3944951 2693474 RPA3494 Rhodopseudomonas palustris CGA009 tripartite tricarboxylate transport(TTT) family subunit TctC NP_948832.1 3943944 R 258594 CDS NP_948833.1 39936557 2693362 complement(3945053..3946567) 1 NC_005296.1 hypothetical protein 3946567 2693362 RPA3495 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948833.1 3945053 R 258594 CDS NP_948834.1 39936558 2693202 complement(3946578..3947078) 1 NC_005296.1 tripartite tricarboxylate transport(TTT) family subunit TctB 3947078 2693202 RPA3496 Rhodopseudomonas palustris CGA009 tripartite tricarboxylate transport(TTT) family subunit TctB NP_948834.1 3946578 R 258594 CDS NP_948835.1 39936559 2693216 complement(3947151..3947681) 1 NC_005296.1 chromate transporter 3947681 2693216 RPA3497 Rhodopseudomonas palustris CGA009 chromate transporter NP_948835.1 3947151 R 258594 CDS NP_948836.1 39936560 2693565 complement(3947678..3948274) 1 NC_005296.1 chromate transporter 3948274 2693565 RPA3498 Rhodopseudomonas palustris CGA009 chromate transporter NP_948836.1 3947678 R 258594 CDS NP_948837.1 39936561 2693480 3949002..3949538 1 NC_005296.1 hypothetical protein 3949538 2693480 RPA3499 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948837.1 3949002 D 258594 CDS NP_948838.1 39936562 2693242 3949644..3951077 1 NC_005296.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 3951077 fumC 2693242 fumC Rhodopseudomonas palustris CGA009 fumarate hydratase NP_948838.1 3949644 D 258594 CDS NP_948839.1 39936563 2693502 3951527..3951805 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3951805 2693502 RPA3501 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948839.1 3951527 D 258594 CDS NP_948840.1 39936564 2693507 complement(3951826..3955641) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3955641 2693507 RPA3502 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948840.1 3951826 R 258594 CDS NP_948841.1 39936565 2691679 complement(3955777..3957240) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; D-lactate dehydrogenase oxidoreductase 3957240 2691679 RPA3503 Rhodopseudomonas palustris CGA009 D-lactate dehydrogenase oxidoreductase NP_948841.1 3955777 R 258594 CDS NP_948842.1 39936566 2693175 3957325..3957804 1 NC_005296.1 thioesterase 3957804 2693175 RPA3504 Rhodopseudomonas palustris CGA009 thioesterase NP_948842.1 3957325 D 258594 CDS NP_948843.1 39936567 2693382 complement(3957801..3957974) 1 NC_005296.1 hypothetical protein 3957974 2693382 RPA3505 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948843.1 3957801 R 258594 CDS NP_948844.1 39936568 2693621 3958287..3960833 1 NC_005296.1 UvrD/REP helicase 3960833 uvrD 2693621 uvrD Rhodopseudomonas palustris CGA009 UvrD/REP helicase NP_948844.1 3958287 D 258594 CDS NP_948845.1 39936569 2691062 3960833..3961117 1 NC_005296.1 hypothetical protein 3961117 2691062 RPA3507 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948845.1 3960833 D 258594 CDS NP_948846.1 39936570 2692776 3961413..3962333 1 NC_005296.1 ABC transporter ATP-binding protein 3962333 2692776 RPA3508 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_948846.1 3961413 D 258594 CDS NP_948847.1 39936571 2691053 3962336..3963097 1 NC_005296.1 hypothetical protein 3963097 2691053 RPA3509 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948847.1 3962336 D 258594 CDS NP_948848.1 39936572 2688816 complement(3963169..3963516) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 3963516 2688816 RPA3510 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948848.1 3963169 R 258594 CDS NP_948849.1 39936573 2691143 3963779..3964549 1 NC_005296.1 ErfK/YbiS/YcfS/YnhG protein 3964549 2691143 RPA3511 Rhodopseudomonas palustris CGA009 ErfK/YbiS/YcfS/YnhG protein NP_948849.1 3963779 D 258594 CDS NP_948850.1 39936574 2690597 complement(3964611..3966761) 1 NC_005296.1 hypothetical protein 3966761 2690597 RPA3512 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948850.1 3964611 R 258594 CDS NP_948851.1 39936575 2692766 3966889..3968661 1 NC_005296.1 FAD dependent oxidoreductase 3968661 2692766 RPA3513 Rhodopseudomonas palustris CGA009 FAD dependent oxidoreductase NP_948851.1 3966889 D 258594 CDS NP_948852.1 39936576 2692764 3969431..3970366 1 NC_005296.1 ribosomal L11 methyltransferase 3970366 2692764 RPA3514 Rhodopseudomonas palustris CGA009 ribosomal L11 methyltransferase NP_948852.1 3969431 D 258594 CDS NP_948853.1 39936577 2692753 3970781..3972610 1 NC_005296.1 peptidase M24 3972610 2692753 RPA3515 Rhodopseudomonas palustris CGA009 peptidase M24 NP_948853.1 3970781 D 258594 CDS NP_948854.1 39936578 2691028 3972983..3974269 1 NC_005296.1 MFS family efflux pump 3974269 2691028 RPA3516 Rhodopseudomonas palustris CGA009 MFS family efflux pump NP_948854.1 3972983 D 258594 CDS NP_948855.1 39936579 2692760 complement(3974463..3976541) 1 NC_005296.1 DNA ligase 3976541 dnlJ 2692760 dnlJ Rhodopseudomonas palustris CGA009 DNA ligase NP_948855.1 3974463 R 258594 CDS NP_948856.1 39936580 2692739 3976757..3977044 1 NC_005296.1 excinuclease ABC subunit C 3977044 2692739 RPA3518 Rhodopseudomonas palustris CGA009 excinuclease ABC subunit C NP_948856.1 3976757 D 258594 CDS NP_948857.1 39936581 2692737 complement(3977199..3978884) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DNA repair protein RecN 3978884 recN 2692737 recN Rhodopseudomonas palustris CGA009 DNA repair protein RecN NP_948857.1 3977199 R 258594 CDS NP_948858.1 39936582 2691695 complement(3978897..3979805) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; lipoprotein 3979805 2691695 RPA3520 Rhodopseudomonas palustris CGA009 lipoprotein NP_948858.1 3978897 R 258594 CDS NP_948859.1 39936583 2691264 complement(3980032..3981087) 1 NC_005296.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3981087 lpxC 2691264 lpxC Rhodopseudomonas palustris CGA009 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase NP_948859.1 3980032 R 258594 CDS NP_948860.1 39936584 2691959 complement(3981341..3983119) 1 NC_005296.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 3983119 ftsZ 2691959 ftsZ Rhodopseudomonas palustris CGA009 cell division protein FtsZ NP_948860.1 3981341 R 258594 CDS NP_948861.1 39936585 2691951 complement(3983213..3984535) 1 NC_005296.1 cell division protein FtsA 3984535 ftsA 2691951 ftsA Rhodopseudomonas palustris CGA009 cell division protein FtsA NP_948861.1 3983213 R 258594 CDS NP_948862.1 39936586 2692718 complement(3984532..3985521) 1 NC_005296.1 cell division protein FtsQ 3985521 ftsQ 2692718 ftsQ Rhodopseudomonas palustris CGA009 cell division protein FtsQ NP_948862.1 3984532 R 258594 CDS NP_948863.1 39936587 2692713 complement(3985840..3986829) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; D-alanine--D-alanine ligase 3986829 ddlA 2692713 ddlA Rhodopseudomonas palustris CGA009 D-alanine--D-alanine ligase NP_948863.1 3985840 R 258594 CDS NP_948864.1 39936588 2692711 complement(3986939..3988267) 1 NC_005296.1 hypothetical protein 3988267 2692711 RPA3526 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948864.1 3986939 R 258594 CDS NP_948865.1 39936589 2692705 3988434..3989318 1 NC_005296.1 hypothetical protein 3989318 2692705 RPA3527 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948865.1 3988434 D 258594 CDS NP_948866.1 39936590 2692693 complement(3989368..3990342) 1 NC_005296.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 3990342 murB 2692693 murB Rhodopseudomonas palustris CGA009 UDP-N-acetylenolpyruvoylglucosamine reductase NP_948866.1 3989368 R 258594 CDS NP_948867.1 39936591 2690988 complement(3990383..3991786) 1 NC_005296.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3991786 murC 2690988 murC Rhodopseudomonas palustris CGA009 UDP-N-acetylmuramate--L-alanine ligase NP_948867.1 3990383 R 258594 CDS NP_948868.1 39936592 2691939 complement(3991923..3993023) 1 NC_005296.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 3993023 murG 2691939 murG Rhodopseudomonas palustris CGA009 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase NP_948868.1 3991923 R 258594 CDS NP_948869.1 39936593 2691940 complement(3993028..3994170) 1 NC_005296.1 cell division protein ftsW 3994170 ftsW 2691940 ftsW Rhodopseudomonas palustris CGA009 cell division protein ftsW NP_948869.1 3993028 R 258594 CDS NP_948870.1 39936594 2690940 complement(3994412..3995821) 1 NC_005296.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 3995821 murD 2690940 murD Rhodopseudomonas palustris CGA009 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase NP_948870.1 3994412 R 258594 CDS NP_948871.1 39936595 2690943 complement(3996009..3997094) 1 NC_005296.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 3997094 mraY 2690943 mraY Rhodopseudomonas palustris CGA009 phospho-N-acetylmuramoyl-pentapeptide- transferase NP_948871.1 3996009 R 258594 CDS NP_948872.1 39936596 2690757 complement(3997105..3998544) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase 3998544 murF 2690757 murF Rhodopseudomonas palustris CGA009 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase NP_948872.1 3997105 R 258594 CDS NP_948873.1 39936597 2690767 complement(3998541..3999998) 1 NC_005296.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 3999998 murE 2690767 murE Rhodopseudomonas palustris CGA009 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase NP_948873.1 3998541 R 258594 CDS NP_948874.1 39936598 2690754 complement(4000111..4001865) 1 NC_005296.1 peptidoglycan glycosyltransferase 4001865 2690754 RPA3536 Rhodopseudomonas palustris CGA009 peptidoglycan glycosyltransferase NP_948874.1 4000111 R 258594 CDS NP_948875.1 39936599 2690052 complement(4001862..4002245) 1 NC_005296.1 hypothetical protein 4002245 2690052 RPA3537 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948875.1 4001862 R 258594 CDS NP_948876.1 39936600 2690070 complement(4002242..4003240) 1 NC_005296.1 S-adenosyl-methyltransferase MraW 4003240 mraW 2690070 mraW Rhodopseudomonas palustris CGA009 S-adenosyl-methyltransferase MraW NP_948876.1 4002242 R 258594 CDS NP_948877.1 39936601 2690062 4003820..4004605 1 NC_005296.1 peptidoglycan binding domain-containing protein 4004605 2690062 RPA3539 Rhodopseudomonas palustris CGA009 peptidoglycan binding domain-containing protein NP_948877.1 4003820 D 258594 CDS NP_948878.1 39936602 2691071 complement(4005202..4005771) 1 NC_005296.1 cell filamentation protein 4005771 2691071 RPA3540 Rhodopseudomonas palustris CGA009 cell filamentation protein NP_948878.1 4005202 R 258594 CDS NP_948879.1 39936603 2691066 complement(4005773..4005973) 1 NC_005296.1 hypothetical protein 4005973 2691066 RPA3541 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948879.1 4005773 R 258594 CDS NP_948880.1 39936604 2691075 complement(4006022..4007614) 1 NC_005296.1 EmrB/QacA subfamily drug resistance transporter 4007614 emrB1 2691075 emrB1 Rhodopseudomonas palustris CGA009 EmrB/QacA subfamily drug resistance transporter NP_948880.1 4006022 R 258594 CDS NP_948881.1 39936605 2691084 complement(4007765..4009033) 1 NC_005296.1 multidrug resistance efflux pump 4009033 2691084 RPA3543 Rhodopseudomonas palustris CGA009 multidrug resistance efflux pump NP_948881.1 4007765 R 258594 CDS NP_948882.1 39936606 2691097 4009215..4009865 1 NC_005296.1 TetR family transcriptional regulator 4009865 2691097 RPA3544 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_948882.1 4009215 D 258594 CDS NP_948883.1 39936607 2692672 complement(4009877..4011184) 1 NC_005296.1 hypothetical protein 4011184 2692672 RPA3545 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948883.1 4009877 R 258594 CDS NP_948884.1 39936608 2691824 complement(4011242..4013197) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 4013197 2691824 RPA3546 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_948884.1 4011242 R 258594 CDS NP_948885.1 39936609 2691960 complement(4013379..4013627) 1 NC_005296.1 hypothetical protein 4013627 2691960 RPA3547 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948885.1 4013379 R 258594 CDS NP_948886.1 39936610 2691699 complement(4013663..4016911) 1 NC_005296.1 serine protease/outer membrane autotransporter 4016911 2691699 RPA3548 Rhodopseudomonas palustris CGA009 serine protease/outer membrane autotransporter NP_948886.1 4013663 R 258594 CDS NP_948887.1 39936611 2691703 4017089..4017727 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hydrolase 4017727 2691703 RPA3549 Rhodopseudomonas palustris CGA009 hydrolase NP_948887.1 4017089 D 258594 CDS NP_948888.1 39936612 2689784 4018092..4019861 1 NC_005296.1 coenzyme B12-binding elongator protein 3/MiaB/NifB 4019861 2689784 RPA3550 Rhodopseudomonas palustris CGA009 coenzyme B12-binding elongator protein 3/MiaB/NifB NP_948888.1 4018092 D 258594 CDS NP_948889.1 39936613 2689782 4019858..4020577 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short chain dehydrogenase 4020577 2689782 RPA3551 Rhodopseudomonas palustris CGA009 short chain dehydrogenase NP_948889.1 4019858 D 258594 CDS NP_948890.1 39936614 2689977 4020574..4021392 1 NC_005296.1 short-chain dehydrogenase/reductase 4021392 2689977 RPA3552 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase NP_948890.1 4020574 D 258594 CDS NP_948891.1 39936615 2689849 complement(4021413..4022534) 1 NC_005296.1 bile acid:sodium symporter 4022534 2689849 RPA3553 Rhodopseudomonas palustris CGA009 bile acid:sodium symporter NP_948891.1 4021413 R 258594 CDS NP_948892.1 39936616 2689982 complement(4022698..4023123) 1 NC_005296.1 arsenate reductase 4023123 arsC2 2689982 arsC2 Rhodopseudomonas palustris CGA009 arsenate reductase NP_948892.1 4022698 R 258594 CDS NP_948893.1 39936617 2692671 complement(4023123..4023650) 1 NC_005296.1 arsenate reductase 4023650 arsC3 2692671 arsC3 Rhodopseudomonas palustris CGA009 arsenate reductase NP_948893.1 4023123 R 258594 CDS NP_948894.1 39936618 2689958 complement(4023643..4023999) 1 NC_005296.1 ArsR family transcriptional regulator 4023999 arsR2 2689958 arsR2 Rhodopseudomonas palustris CGA009 ArsR family transcriptional regulator NP_948894.1 4023643 R 258594 CDS NP_948895.1 39936619 2689928 complement(4024054..4024290) 1 NC_005296.1 thiol-disulfide isomerase 4024290 2689928 RPA3557 Rhodopseudomonas palustris CGA009 thiol-disulfide isomerase NP_948895.1 4024054 R 258594 CDS NP_948896.1 39936620 2690073 complement(4024302..4025351) 1 NC_005296.1 permease 4025351 2690073 RPA3558 Rhodopseudomonas palustris CGA009 permease NP_948896.1 4024302 R 258594 CDS NP_948897.1 39936621 2690093 complement(4025348..4025647) 1 NC_005296.1 ArsR family transcriptional regulator 4025647 arsR3 2690093 arsR3 Rhodopseudomonas palustris CGA009 ArsR family transcriptional regulator NP_948897.1 4025348 R 258594 CDS NP_948898.1 39936622 2690095 4025789..4026574 1 NC_005296.1 hypothetical protein 4026574 2690095 RPA3560 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948898.1 4025789 D 258594 CDS NP_948899.1 39936623 2692667 4026812..4027168 1 NC_005296.1 ArsR family transcriptional regulator 4027168 2692667 RPA3561 Rhodopseudomonas palustris CGA009 ArsR family transcriptional regulator NP_948899.1 4026812 D 258594 CDS NP_948900.1 39936624 2690104 4027158..4028009 1 NC_005296.1 in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine; arsenite S-adenosylmethyltransferase 4028009 arsM 2690104 arsM Rhodopseudomonas palustris CGA009 arsenite S-adenosylmethyltransferase NP_948900.1 4027158 D 258594 CDS NP_948901.1 39936625 2689395 complement(4028667..4029065) 1 NC_005296.1 hypothetical protein 4029065 2689395 RPA3563 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948901.1 4028667 R 258594 CDS NP_948902.1 39936626 2690118 complement(4029316..4030764) 1 NC_005296.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase 4030764 tnaA 2690118 tnaA Rhodopseudomonas palustris CGA009 tryptophanase NP_948902.1 4029316 R 258594 CDS NP_948903.1 39936627 2692659 4031035..4031754 1 NC_005296.1 ErfK/YbiS/YcfS/YnhG protein 4031754 2692659 RPA3565 Rhodopseudomonas palustris CGA009 ErfK/YbiS/YcfS/YnhG protein NP_948903.1 4031035 D 258594 CDS NP_948904.1 39936628 2692660 4031944..4032282 1 NC_005296.1 hypothetical protein 4032282 2692660 RPA3566 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948904.1 4031944 D 258594 CDS NP_948905.1 39936629 2690133 4032439..4034001 1 NC_005296.1 hypothetical protein 4034001 2690133 RPA3567 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948905.1 4032439 D 258594 CDS NP_948906.1 39936630 2690150 complement(4034096..4034635) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4034635 2690150 RPA3568 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948906.1 4034096 R 258594 CDS NP_948907.1 39936631 2690156 complement(4034923..4035465) 1 NC_005296.1 hypothetical protein 4035465 2690156 RPA3569 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948907.1 4034923 R 258594 CDS NP_948908.1 39936632 2690155 4035633..4036355 1 NC_005296.1 two-component transcriptional regulator 4036355 2690155 RPA3570 Rhodopseudomonas palustris CGA009 two-component transcriptional regulator NP_948908.1 4035633 D 258594 CDS NP_948909.1 39936633 2690167 4036352..4037686 1 NC_005296.1 two component sensor histidine kinase 4037686 2690167 RPA3571 Rhodopseudomonas palustris CGA009 two component sensor histidine kinase NP_948909.1 4036352 D 258594 CDS NP_948910.1 39936634 2690175 complement(4037705..4039423) 1 NC_005296.1 hypothetical protein 4039423 2690175 RPA3572 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948910.1 4037705 R 258594 CDS NP_948911.1 39936635 2690187 4039635..4040612 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glycine oxidase ThiO 4040612 thiO 2690187 thiO Rhodopseudomonas palustris CGA009 glycine oxidase ThiO NP_948911.1 4039635 D 258594 CDS NP_948912.1 39936636 2690200 4040603..4040800 1 NC_005296.1 thiamine biosynthesis protein ThiS 4040800 thiS 2690200 thiS Rhodopseudomonas palustris CGA009 thiamine biosynthesis protein ThiS NP_948912.1 4040603 D 258594 CDS NP_948913.1 39936637 2690192 4041053..4041835 1 NC_005296.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 4041835 thiG 2690192 thiG Rhodopseudomonas palustris CGA009 thiazole synthase NP_948913.1 4041053 D 258594 CDS NP_948914.1 39936638 2690186 4041822..4042430 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; thiamine-phosphate pyrophosphorylase 4042430 thiE 2690186 thiE Rhodopseudomonas palustris CGA009 thiamine-phosphate pyrophosphorylase NP_948914.1 4041822 D 258594 CDS NP_948915.1 39936639 2690209 4042665..4044665 1 NC_005296.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 4044665 thiC 2690209 thiC Rhodopseudomonas palustris CGA009 thiamine biosynthesis protein ThiC NP_948915.1 4042665 D 258594 CDS NP_948916.1 39936640 2690214 4044836..4045711 1 NC_005296.1 hypothetical protein 4045711 2690214 RPA3578 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948916.1 4044836 D 258594 CDS NP_948917.1 39936641 2690216 4045969..4046235 1 NC_005296.1 hypothetical protein 4046235 2690216 RPA3579 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948917.1 4045969 D 258594 CDS NP_948918.1 39936642 2690230 4046232..4047152 1 NC_005296.1 integrase catalytic subunit 4047152 2690230 RPA3580 Rhodopseudomonas palustris CGA009 integrase catalytic subunit NP_948918.1 4046232 D 258594 CDS NP_948919.1 39936643 2690236 complement(4047139..4047318) 1 NC_005296.1 hypothetical protein 4047318 2690236 RPA3581 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948919.1 4047139 R 258594 CDS NP_948920.1 39936644 2690233 complement(4047439..4047969) 1 NC_005296.1 hypothetical protein 4047969 2690233 RPA3582 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948920.1 4047439 R 258594 CDS NP_948921.1 39936645 2690237 complement(4047957..4048295) 1 NC_005296.1 hypothetical protein 4048295 2690237 RPA3583 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948921.1 4047957 R 258594 CDS NP_948922.1 39936646 2690241 4048474..4049253 1 NC_005296.1 hypothetical protein 4049253 2690241 RPA3584 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948922.1 4048474 D 258594 CDS NP_948923.1 39936647 2690245 complement(4049441..4049953) 1 NC_005296.1 hypothetical protein 4049953 2690245 RPA3585 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948923.1 4049441 R 258594 CDS NP_948924.1 39936648 2690249 complement(4050261..4050725) 1 NC_005296.1 hypothetical protein 4050725 2690249 RPA3586 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948924.1 4050261 R 258594 CDS NP_948925.1 39936649 2690255 4051923..4052207 1 NC_005296.1 hypothetical protein 4052207 2690255 RPA3587 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948925.1 4051923 D 258594 CDS NP_948926.1 39936650 2690261 complement(4052583..4053875) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4053875 2690261 RPA3588 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948926.1 4052583 R 258594 CDS NP_948927.1 39936651 2690267 4054172..4054726 1 NC_005296.1 hypothetical protein 4054726 2690267 RPA3589 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948927.1 4054172 D 258594 CDS NP_948928.1 39936652 2690268 complement(4054719..4055147) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4055147 2690268 RPA3590 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948928.1 4054719 R 258594 CDS NP_948929.1 39936653 2690263 4055350..4055733 1 NC_005296.1 endoribonuclease L-PSP 4055733 2690263 RPA3591 Rhodopseudomonas palustris CGA009 endoribonuclease L-PSP NP_948929.1 4055350 D 258594 CDS NP_948930.1 39936654 2690280 4055953..4057032 1 NC_005296.1 hypothetical protein 4057032 2690280 RPA3592 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948930.1 4055953 D 258594 CDS NP_948931.1 39936655 2692634 4057138..4057776 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; triple helix repeat-containing collagen 4057776 2692634 RPA3593 Rhodopseudomonas palustris CGA009 triple helix repeat-containing collagen NP_948931.1 4057138 D 258594 CDS NP_948932.1 39936656 2690264 complement(4057819..4058085) 1 NC_005296.1 hypothetical protein 4058085 2690264 RPA3594 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948932.1 4057819 R 258594 CDS NP_948933.1 39936657 2690277 4058240..4058869 1 NC_005296.1 hypothetical protein 4058869 2690277 RPA3595 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948933.1 4058240 D 258594 CDS NP_948934.1 39936658 2690285 complement(4058884..4060089) 1 NC_005296.1 hypothetical protein 4060089 2690285 RPA3596 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948934.1 4058884 R 258594 CDS NP_948935.1 39936659 2690290 complement(4060076..4061734) 1 NC_005296.1 hypothetical protein 4061734 2690290 RPA3597 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948935.1 4060076 R 258594 CDS NP_948936.1 39936660 2690296 4061895..4063706 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 4063706 2690296 RPA3598 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_948936.1 4061895 D 258594 CDS NP_948937.1 39936661 2690309 4063844..4064386 1 NC_005296.1 hypothetical protein 4064386 2690309 RPA3599 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948937.1 4063844 D 258594 CDS NP_948938.1 39936662 2690302 complement(4064442..4064924) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; bacterioferritin 4064924 bfr 2690302 bfr Rhodopseudomonas palustris CGA009 bacterioferritin NP_948938.1 4064442 R 258594 CDS NP_948939.1 39936663 2690307 4065648..4066007 1 NC_005296.1 hypothetical protein 4066007 2690307 RPA3601 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948939.1 4065648 D 258594 CDS NP_948940.1 39936664 2689722 4066228..4066512 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4066512 2689722 RPA3602 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948940.1 4066228 D 258594 CDS NP_948941.1 39936665 2689901 complement(4066589..4068463) 1 NC_005296.1 lytic murein transglycosylase 4068463 2689901 RPA3603 Rhodopseudomonas palustris CGA009 lytic murein transglycosylase NP_948941.1 4066589 R 258594 CDS NP_948942.1 39936666 2689892 complement(4067833..4068423) 1 NC_005296.1 hypothetical protein 4068423 2689892 RPA3604 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948942.1 4067833 R 258594 CDS NP_948943.1 39936667 2689981 complement(4068598..4069368) 1 NC_005296.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 4069368 2689981 RPA3605 Rhodopseudomonas palustris CGA009 trans-aconitate 2-methyltransferase NP_948943.1 4068598 R 258594 CDS NP_948944.1 39936668 2689897 4069410..4069688 1 NC_005296.1 hypothetical protein 4069688 2689897 RPA3606 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948944.1 4069410 D 258594 CDS NP_948945.1 39936669 2689726 4069978..4070232 1 NC_005296.1 AbrB/SpoVT family transcriptional regulator 4070232 2689726 RPA3607 Rhodopseudomonas palustris CGA009 AbrB/SpoVT family transcriptional regulator NP_948945.1 4069978 D 258594 CDS NP_948946.1 39936670 2689735 4070229..4070630 1 NC_005296.1 twitching motility protein PilT 4070630 2689735 RPA3608 Rhodopseudomonas palustris CGA009 twitching motility protein PilT NP_948946.1 4070229 D 258594 CDS NP_948947.1 39936671 2689738 complement(4070637..4072286) 1 NC_005296.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 4072286 2689738 RPA3609 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_948947.1 4070637 R 258594 CDS NP_948948.1 39936672 2690762 4072527..4072727 1 NC_005296.1 hypothetical protein 4072727 2690762 RPA3610 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948948.1 4072527 D 258594 CDS NP_948949.1 39936673 2690689 complement(4072807..4073691) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ErfK/YbiS/YcfS/YnhG protein 4073691 2690689 RPA3611 Rhodopseudomonas palustris CGA009 ErfK/YbiS/YcfS/YnhG protein NP_948949.1 4072807 R 258594 CDS NP_948950.1 39936674 2689796 4074440..4075474 1 NC_005296.1 hypothetical protein 4075474 2689796 RPA3612 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948950.1 4074440 D 258594 CDS NP_948951.1 39936675 2689788 complement(4075487..4076347) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; thiosulfate sulfurtransferase 4076347 2689788 RPA3613 Rhodopseudomonas palustris CGA009 thiosulfate sulfurtransferase NP_948951.1 4075487 R 258594 CDS NP_948952.1 39936676 2689832 complement(4076464..4076880) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; rhodanese-like protein 4076880 2689832 RPA3614 Rhodopseudomonas palustris CGA009 rhodanese-like protein NP_948952.1 4076464 R 258594 CDS NP_948953.1 39936677 2689793 complement(4077026..4078201) 1 NC_005296.1 hypothetical protein 4078201 2689793 RPA3615 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948953.1 4077026 R 258594 CDS NP_948954.1 39936678 2691100 4078368..4080302 1 NC_005296.1 diguanylate cyclase 4080302 2691100 RPA3616 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_948954.1 4078368 D 258594 CDS NP_948955.1 39936679 2691112 4080472..4080726 1 NC_005296.1 hypothetical protein 4080726 2691112 RPA3617 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948955.1 4080472 D 258594 CDS NP_948956.1 39936680 2690779 4080841..4081683 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ATPase 4081683 2690779 RPA3618 Rhodopseudomonas palustris CGA009 ATPase NP_948956.1 4080841 D 258594 CDS NP_948957.1 39936681 2690778 4082101..4083144 1 NC_005296.1 vanillate O-demethylase oxygenase iron-sulfur subunit 4083144 vanA 2690778 vanA Rhodopseudomonas palustris CGA009 vanillate O-demethylase oxygenase iron-sulfur subunit NP_948957.1 4082101 D 258594 CDS NP_948958.1 39936682 2690771 4083148..4083903 1 NC_005296.1 GntR family transcriptional regulator 4083903 vanR 2690771 vanR Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_948958.1 4083148 D 258594 CDS NP_948959.1 39936683 2690790 4083934..4084926 1 NC_005296.1 vanillate O-demethylase oxidoreductase 4084926 vanB 2690790 vanB Rhodopseudomonas palustris CGA009 vanillate O-demethylase oxidoreductase NP_948959.1 4083934 D 258594 CDS NP_948960.1 39936684 2690693 complement(4085029..4085313) 1 NC_005296.1 hypothetical protein 4085313 2690693 RPA3622 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948960.1 4085029 R 258594 CDS NP_948961.1 39936685 2690694 complement(4085453..4086049) 1 NC_005296.1 N-acetyltransferase GCN5 4086049 2690694 RPA3623 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_948961.1 4085453 R 258594 CDS NP_948962.1 39936686 2690696 complement(4086198..4087127) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; gluconolactonase 4087127 2690696 RPA3624 Rhodopseudomonas palustris CGA009 gluconolactonase NP_948962.1 4086198 R 258594 CDS NP_948963.1 39936687 2690325 4087553..4088125 1 NC_005296.1 excinuclease ABC subunit C 4088125 2690325 RPA3625 Rhodopseudomonas palustris CGA009 excinuclease ABC subunit C NP_948963.1 4087553 D 258594 CDS NP_948964.1 39936688 2690330 complement(4088910..4089164) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4089164 2690330 RPA3626 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948964.1 4088910 R 258594 CDS NP_948965.1 39936689 2690329 complement(4089161..4089637) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutathione peroxidase 4089637 2690329 RPA3627 Rhodopseudomonas palustris CGA009 glutathione peroxidase NP_948965.1 4089161 R 258594 CDS NP_948966.1 39936690 2690326 complement(4089656..4091053) 1 NC_005296.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 4091053 2690326 RPA3628 Rhodopseudomonas palustris CGA009 amidase NP_948966.1 4089656 R 258594 CDS NP_948967.1 39936691 2690332 complement(4091125..4091382) 1 NC_005296.1 hypothetical protein 4091382 2690332 RPA3629 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948967.1 4091125 R 258594 CDS NP_948968.1 39936692 2692619 4091519..4092508 1 NC_005296.1 proline iminopeptidase 4092508 2692619 RPA3630 Rhodopseudomonas palustris CGA009 proline iminopeptidase NP_948968.1 4091519 D 258594 CDS NP_948969.1 39936693 2690342 complement(4092518..4093291) 1 NC_005296.1 glucose dehydrogenase 4093291 2690342 RPA3631 Rhodopseudomonas palustris CGA009 glucose dehydrogenase NP_948969.1 4092518 R 258594 CDS NP_948970.1 39936694 2692617 4093389..4093871 1 NC_005296.1 MarR family transcriptional regulator 4093871 2692617 RPA3632 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_948970.1 4093389 D 258594 CDS NP_948971.1 39936695 2689906 4093891..4094565 1 NC_005296.1 hypothetical protein 4094565 2689906 RPA3633 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948971.1 4093891 D 258594 CDS NP_948972.1 39936696 2692612 4094709..4097633 1 NC_005296.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate; bifunctional transaldolase/phosoglucose isomerase 4097633 tal 2692612 tal Rhodopseudomonas palustris CGA009 bifunctional transaldolase/phosoglucose isomerase NP_948972.1 4094709 D 258594 CDS NP_948973.1 39936697 2689746 4097820..4098860 1 NC_005296.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 4098860 gnd 2689746 gnd Rhodopseudomonas palustris CGA009 6-phosphogluconate dehydrogenase NP_948973.1 4097820 D 258594 CDS NP_948974.1 39936698 2691159 4098857..4100371 1 NC_005296.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 4100371 zwf 2691159 zwf Rhodopseudomonas palustris CGA009 glucose-6-phosphate 1-dehydrogenase NP_948974.1 4098857 D 258594 CDS NP_948975.1 39936699 2691158 4100374..4101111 1 NC_005296.1 6-phosphogluconolactonase 4101111 pgl 2691158 pgl Rhodopseudomonas palustris CGA009 6-phosphogluconolactonase NP_948975.1 4100374 D 258594 CDS NP_948976.1 39936700 2691152 4101080..4101643 1 NC_005296.1 carbohydrate kinase thermoresistant glucokinase 4101643 2691152 RPA3638 Rhodopseudomonas palustris CGA009 carbohydrate kinase thermoresistant glucokinase NP_948976.1 4101080 D 258594 CDS NP_948977.1 39936701 2690678 4101767..4102585 1 NC_005296.1 cof family hydrolase 4102585 cof 2690678 cof Rhodopseudomonas palustris CGA009 cof family hydrolase NP_948977.1 4101767 D 258594 CDS NP_948978.1 39936702 2691167 complement(4102582..4104390) 1 NC_005296.1 glycoside hydrolase family protein 4104390 2691167 RPA3640 Rhodopseudomonas palustris CGA009 glycoside hydrolase family protein NP_948978.1 4102582 R 258594 CDS NP_948979.1 39936703 2691172 complement(4104395..4106347) 1 NC_005296.1 4-alpha-glucanotransferase 4106347 malQ 2691172 malQ Rhodopseudomonas palustris CGA009 4-alpha-glucanotransferase NP_948979.1 4104395 R 258594 CDS NP_948980.1 39936704 2691169 4106445..4108511 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alpha amylase 4108511 2691169 RPA3642 Rhodopseudomonas palustris CGA009 alpha amylase NP_948980.1 4106445 D 258594 CDS NP_948981.1 39936705 2691173 4108522..4111824 1 NC_005296.1 trehalose synthase 4111824 2691173 RPA3643 Rhodopseudomonas palustris CGA009 trehalose synthase NP_948981.1 4108522 D 258594 CDS NP_948982.1 39936706 2690661 4111821..4113971 1 NC_005296.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 4113971 glgB 2690661 glgB Rhodopseudomonas palustris CGA009 glycogen branching protein NP_948982.1 4111821 D 258594 CDS NP_948983.1 39936707 2691176 4114210..4116291 1 NC_005296.1 glycogen debranching protein GlgX 4116291 glgX 2691176 glgX Rhodopseudomonas palustris CGA009 glycogen debranching protein GlgX NP_948983.1 4114210 D 258594 CDS NP_948984.1 39936708 2691188 4116288..4118054 1 NC_005296.1 maltooligosyltrehalose trehalohydrolase 4118054 2691188 RPA3646 Rhodopseudomonas palustris CGA009 maltooligosyltrehalose trehalohydrolase NP_948984.1 4116288 D 258594 CDS NP_948985.1 39936709 2692792 4118054..4120840 1 NC_005296.1 malto-oligosyltrehalose synthase 4120840 2692792 RPA3647 Rhodopseudomonas palustris CGA009 malto-oligosyltrehalose synthase NP_948985.1 4118054 D 258594 CDS NP_948986.1 39936710 2692802 complement(4121257..4121565) 1 NC_005296.1 hypothetical protein 4121565 2692802 RPA3648 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948986.1 4121257 R 258594 CDS NP_948987.1 39936711 2692804 4121610..4121906 1 NC_005296.1 hypothetical protein 4121906 2692804 RPA3649 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948987.1 4121610 D 258594 CDS NP_948988.1 39936712 2692806 complement(4122046..4124790) 1 NC_005296.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 4124790 ligD 2692806 ligD Rhodopseudomonas palustris CGA009 ATP-dependent DNA ligase NP_948988.1 4122046 R 258594 CDS NP_948989.1 39936713 2692817 4124924..4125805 1 NC_005296.1 Ku domain-containing protein 4125805 2692817 RPA3651 Rhodopseudomonas palustris CGA009 Ku domain-containing protein NP_948989.1 4124924 D 258594 CDS NP_948990.1 39936714 2692824 complement(4126028..4126426) 1 NC_005296.1 hypothetical protein 4126426 2692824 RPA3652 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948990.1 4126028 R 258594 CDS NP_948991.1 39936715 2691183 complement(4126487..4126747) 1 NC_005296.1 SirA-like protein 4126747 2691183 RPA3653 Rhodopseudomonas palustris CGA009 SirA-like protein NP_948991.1 4126487 R 258594 CDS NP_948992.1 39936716 2691177 4126878..4127498 1 NC_005296.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4127498 mobA 2691177 mobA Rhodopseudomonas palustris CGA009 molybdopterin-guanine dinucleotide biosynthesis protein MobA NP_948992.1 4126878 D 258594 CDS NP_948993.1 39936717 2690783 complement(4127608..4128660) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alcohol dehydrogenase 4128660 2690783 RPA3655 Rhodopseudomonas palustris CGA009 alcohol dehydrogenase NP_948993.1 4127608 R 258594 CDS NP_948994.1 39936718 2690791 complement(4128739..4129728) 1 NC_005296.1 hypothetical protein 4129728 2690791 RPA3656 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948994.1 4128739 R 258594 CDS NP_948995.1 39936719 2690793 4129813..4131375 1 NC_005296.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 4131375 fadD2 2690793 fadD2 Rhodopseudomonas palustris CGA009 acyl-CoA synthetase NP_948995.1 4129813 D 258594 CDS NP_948996.1 39936720 2690658 complement(4131439..4132374) 1 NC_005296.1 urease accessory protein UreF 4132374 ureF 2690658 ureF Rhodopseudomonas palustris CGA009 urease accessory protein UreF NP_948996.1 4131439 R 258594 CDS NP_948997.1 39936721 2690813 complement(4132804..4133103) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4133103 2690813 RPA3659 Rhodopseudomonas palustris CGA009 hypothetical protein NP_948997.1 4132804 R 258594 CDS NP_948998.1 39936722 2690811 complement(4133317..4135029) 1 NC_005296.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 4135029 ureC 2690811 ureC Rhodopseudomonas palustris CGA009 urease subunit alpha NP_948998.1 4133317 R 258594 CDS NP_948999.1 39936723 2692841 complement(4135026..4135562) 1 NC_005296.1 metal dependent phosphohydrolase 4135562 2692841 RPA3661 Rhodopseudomonas palustris CGA009 metal dependent phosphohydrolase NP_948999.1 4135026 R 258594 CDS NP_949000.1 39936724 2692843 complement(4135562..4135867) 1 NC_005296.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 4135867 ureB 2692843 ureB Rhodopseudomonas palustris CGA009 urease subunit beta NP_949000.1 4135562 R 258594 CDS NP_949001.1 39936725 2692851 complement(4136029..4136331) 1 NC_005296.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 4136331 ureA 2692851 ureA Rhodopseudomonas palustris CGA009 urease subunit gamma NP_949001.1 4136029 R 258594 CDS NP_949002.1 39936726 2692854 complement(4136378..4137295) 1 NC_005296.1 urease accessory protein UreD 4137295 ureD 2692854 ureD Rhodopseudomonas palustris CGA009 urease accessory protein UreD NP_949002.1 4136378 R 258594 CDS NP_949003.1 39936727 2692865 complement(4137494..4138189) 1 NC_005296.1 ABC transporter ATP-binding protein 4138189 2692865 RPA3665 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949003.1 4137494 R 258594 CDS NP_949004.1 39936728 2692867 complement(4138409..4139173) 1 NC_005296.1 ABC transporter ATP-binding protein 4139173 2692867 RPA3666 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949004.1 4138409 R 258594 CDS NP_949005.1 39936729 2692871 complement(4139170..4140369) 1 NC_005296.1 inner-membrane translocator 4140369 2692871 RPA3667 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949005.1 4139170 R 258594 CDS NP_949006.1 39936730 2692877 complement(4140443..4142056) 1 NC_005296.1 inner-membrane translocator 4142056 2692877 RPA3668 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949006.1 4140443 R 258594 CDS NP_949007.1 39936731 2690349 complement(4142166..4143488) 1 NC_005296.1 Citation: O'Hara et al. (1999) EMBO J. 18:5175-86 and Wilson et al. EMBO J. (1993) 12:3637-42; observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein 4143488 2690349 RPA3669 Rhodopseudomonas palustris CGA009 urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein NP_949007.1 4142166 R 258594 CDS NP_949008.1 39936732 2690344 4143976..4145400 1 NC_005296.1 ATP-dependent RNA helicase 4145400 2690344 RPA3670 Rhodopseudomonas palustris CGA009 ATP-dependent RNA helicase NP_949008.1 4143976 D 258594 CDS NP_949009.1 39936733 2690356 4145425..4145703 1 NC_005296.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 4145703 infA 2690356 infA Rhodopseudomonas palustris CGA009 translation initiation factor IF-1 NP_949009.1 4145425 D 258594 CDS NP_949010.1 39936734 2690363 4145943..4146197 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cold-shock DNA-binding domain-containing protein 4146197 cspA5 2690363 cspA5 Rhodopseudomonas palustris CGA009 cold-shock DNA-binding domain-containing protein NP_949010.1 4145943 D 258594 CDS NP_949011.1 39936735 2690359 complement(4146311..4146937) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4146937 2690359 RPA3673 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949011.1 4146311 R 258594 CDS NP_949012.1 39936736 2690379 complement(4146950..4147483) 1 NC_005296.1 hypothetical protein 4147483 2690379 RPA3674 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949012.1 4146950 R 258594 CDS NP_949013.1 39936737 2690384 4148391..4148555 1 NC_005296.1 Flp/Fap pilin protein 4148555 2690384 RPA3675 Rhodopseudomonas palustris CGA009 Flp/Fap pilin protein NP_949013.1 4148391 D 258594 CDS NP_949014.1 39936738 2690396 4148883..4149407 1 NC_005296.1 peptidase A24A prepilin type IV 4149407 2690396 RPA3676 Rhodopseudomonas palustris CGA009 peptidase A24A prepilin type IV NP_949014.1 4148883 D 258594 CDS NP_949015.1 39936739 2691910 4149514..4150095 1 NC_005296.1 hypothetical protein 4150095 2691910 RPA3677 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949015.1 4149514 D 258594 CDS NP_949016.1 39936740 2692883 4150110..4151552 1 NC_005296.1 type II and III secretion system protein 4151552 2692883 RPA3678 Rhodopseudomonas palustris CGA009 type II and III secretion system protein NP_949016.1 4150110 D 258594 CDS NP_949017.1 39936741 2692886 4151572..4152300 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pilus assembly protein cpaD 4152300 2692886 RPA3679 Rhodopseudomonas palustris CGA009 pilus assembly protein cpaD NP_949017.1 4151572 D 258594 CDS NP_949018.1 39936742 2692894 4152297..4153568 1 NC_005296.1 pilus assembly protein cpaE 4153568 2692894 RPA3680 Rhodopseudomonas palustris CGA009 pilus assembly protein cpaE NP_949018.1 4152297 D 258594 CDS NP_949019.1 39936743 2692608 4153661..4155043 1 NC_005296.1 type II secretion system protein E 4155043 2692608 RPA3681 Rhodopseudomonas palustris CGA009 type II secretion system protein E NP_949019.1 4153661 D 258594 CDS NP_949020.1 39936744 2692610 4155056..4156030 1 NC_005296.1 type II secretion system protein 4156030 2692610 RPA3682 Rhodopseudomonas palustris CGA009 type II secretion system protein NP_949020.1 4155056 D 258594 CDS NP_949021.1 39936745 2692611 4156039..4157013 1 NC_005296.1 type II secretion system protein 4157013 2692611 RPA3683 Rhodopseudomonas palustris CGA009 type II secretion system protein NP_949021.1 4156039 D 258594 CDS NP_949022.1 39936746 2692912 complement(4157037..4157846) 1 NC_005296.1 TPR repeat-containing protein 4157846 2692912 RPA3684 Rhodopseudomonas palustris CGA009 TPR repeat-containing protein NP_949022.1 4157037 R 258594 CDS NP_949023.1 39936747 2692916 4157949..4159331 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; leucyl aminopeptidase 4159331 2692916 RPA3685 Rhodopseudomonas palustris CGA009 leucyl aminopeptidase NP_949023.1 4157949 D 258594 CDS NP_949024.1 39936748 2692924 4159324..4160169 1 NC_005296.1 NLP/P60 4160169 2692924 RPA3686 Rhodopseudomonas palustris CGA009 NLP/P60 NP_949024.1 4159324 D 258594 CDS NP_949025.1 39936749 2692927 complement(4160153..4160791) 1 NC_005296.1 nucleoside diphosphate pyrophosphatase 4160791 2692927 RPA3687 Rhodopseudomonas palustris CGA009 nucleoside diphosphate pyrophosphatase NP_949025.1 4160153 R 258594 CDS NP_949026.1 39936750 2692149 complement(4160799..4162436) 1 NC_005296.1 peptide ABC transporter ATP-binding protein 4162436 2692149 RPA3688 Rhodopseudomonas palustris CGA009 peptide ABC transporter ATP-binding protein NP_949026.1 4160799 R 258594 CDS NP_949027.1 39936751 2692152 complement(4162442..4163620) 1 NC_005296.1 binding-protein-dependent transport system inner membrane protein 4163620 2692152 RPA3689 Rhodopseudomonas palustris CGA009 binding-protein-dependent transport system inner membrane protein NP_949027.1 4162442 R 258594 CDS NP_949028.1 39936752 2692930 complement(4163620..4164729) 1 NC_005296.1 binding-protein-dependent transport systems inner membrane component 4164729 2692930 RPA3690 Rhodopseudomonas palustris CGA009 binding-protein-dependent transport systems inner membrane component NP_949028.1 4163620 R 258594 CDS NP_949029.1 39936753 2692163 complement(4164731..4166596) 1 NC_005296.1 family 5 extracellular solute-binding protein 4166596 2692163 RPA3691 Rhodopseudomonas palustris CGA009 family 5 extracellular solute-binding protein NP_949029.1 4164731 R 258594 CDS NP_949030.1 39936754 2691198 complement(4166611..4168470) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptide ABC transporter periplasmic peptide-binding protein 4168470 2691198 RPA3692 Rhodopseudomonas palustris CGA009 peptide ABC transporter periplasmic peptide-binding protein NP_949030.1 4166611 R 258594 CDS NP_949031.1 39936755 2688884 complement(4168719..4169273) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome c 4169273 2688884 RPA3693 Rhodopseudomonas palustris CGA009 cytochrome c NP_949031.1 4168719 R 258594 CDS NP_949032.1 39936756 2691528 4169473..4170210 1 NC_005296.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 4170210 kdsB 2691528 kdsB Rhodopseudomonas palustris CGA009 3-deoxy-manno-octulosonate cytidylyltransferase NP_949032.1 4169473 D 258594 CDS NP_949033.1 39936757 2691518 4170282..4171124 1 NC_005296.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 4171124 2691518 RPA3695 Rhodopseudomonas palustris CGA009 prephenate dehydratase NP_949033.1 4170282 D 258594 CDS NP_949034.1 39936758 2691485 complement(4171164..4171790) 1 NC_005296.1 TetR family transcriptional regulator 4171790 2691485 RPA3696 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949034.1 4171164 R 258594 CDS NP_949035.1 39936759 2691588 4171914..4173092 1 NC_005296.1 multidrug resistance protein 4173092 emrA 2691588 emrA Rhodopseudomonas palustris CGA009 multidrug resistance protein NP_949035.1 4171914 D 258594 CDS NP_949036.1 39936760 2690408 4173089..4174621 1 NC_005296.1 MFS family drug efflux pump 4174621 emrB2 2690408 emrB2 Rhodopseudomonas palustris CGA009 MFS family drug efflux pump NP_949036.1 4173089 D 258594 CDS NP_949037.1 39936761 2690418 4174638..4175366 1 NC_005296.1 iron-chelator utilization protein 4175366 2690418 RPA3699 Rhodopseudomonas palustris CGA009 iron-chelator utilization protein NP_949037.1 4174638 D 258594 CDS NP_949038.1 39936762 2690417 complement(4175434..4176450) 1 NC_005296.1 luciferase-like protein 4176450 2690417 RPA3700 Rhodopseudomonas palustris CGA009 luciferase-like protein NP_949038.1 4175434 R 258594 CDS NP_949039.1 39936763 2690430 4176861..4177748 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 5,10-methylenetetrahydrofolate reductase 4177748 metF 2690430 metF Rhodopseudomonas palustris CGA009 5,10-methylenetetrahydrofolate reductase NP_949039.1 4176861 D 258594 CDS NP_949040.1 39936764 2690429 4177761..4181642 1 NC_005296.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4181642 metH 2690429 metH Rhodopseudomonas palustris CGA009 B12-dependent methionine synthase NP_949040.1 4177761 D 258594 CDS NP_949041.1 39936765 2690432 4181818..4182099 1 NC_005296.1 hypothetical protein 4182099 2690432 RPA3703 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949041.1 4181818 D 258594 CDS NP_949042.1 39936766 2692169 4182776..4183063 1 NC_005296.1 excinuclease ABC subunit C 4183063 2692169 RPA3704 Rhodopseudomonas palustris CGA009 excinuclease ABC subunit C NP_949042.1 4182776 D 258594 CDS NP_949043.1 39936767 2692175 complement(4183381..4184883) 1 NC_005296.1 glycerol kinase 4184883 glpK 2692175 glpK Rhodopseudomonas palustris CGA009 glycerol kinase NP_949043.1 4183381 R 258594 CDS NP_949044.1 39936768 2692174 4185092..4185676 1 NC_005296.1 two-component response regulator:antitermination factor NasT 4185676 nasT 2692174 nasT Rhodopseudomonas palustris CGA009 two-component response regulator:antitermination factor NasT NP_949044.1 4185092 D 258594 CDS NP_949045.1 39936769 2691839 4185673..4186833 1 NC_005296.1 nitrate transporter component nrtA 4186833 2691839 RPA3707 Rhodopseudomonas palustris CGA009 nitrate transporter component nrtA NP_949045.1 4185673 D 258594 CDS NP_949046.1 39936770 2691818 4186852..4187292 1 NC_005296.1 globin-like protein 4187292 2691818 RPA3708 Rhodopseudomonas palustris CGA009 globin-like protein NP_949046.1 4186852 D 258594 CDS NP_949047.1 39936771 2691848 4187646..4188071 1 NC_005296.1 hemoprotein 4188071 2691848 RPA3709 Rhodopseudomonas palustris CGA009 hemoprotein NP_949047.1 4187646 D 258594 CDS NP_949048.1 39936772 2692179 4188114..4189886 1 NC_005296.1 ferredoxin-dependent assimilatory nitrite reductase; ferredoxin-nitrite reductase 4189886 nirA 2692179 nirA Rhodopseudomonas palustris CGA009 ferredoxin-nitrite reductase NP_949048.1 4188114 D 258594 CDS NP_949049.1 39936773 2692177 4189883..4191502 1 NC_005296.1 Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway; sulfite reductase 4191502 2692177 RPA3711 Rhodopseudomonas palustris CGA009 sulfite reductase NP_949049.1 4189883 D 258594 CDS NP_949050.1 39936774 2691811 complement(4192563..4193705) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pimeloyl-CoA dehydrogenase small subunit 4193705 pimD 2691811 pimD Rhodopseudomonas palustris CGA009 pimeloyl-CoA dehydrogenase small subunit NP_949050.1 4192563 R 258594 CDS NP_949051.1 39936775 2691814 complement(4193874..4195064) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pimeloyl-CoA dehydrogenase large subunit 4195064 pimC 2691814 pimC Rhodopseudomonas palustris CGA009 pimeloyl-CoA dehydrogenase large subunit NP_949051.1 4193874 R 258594 CDS NP_949052.1 39936776 2692199 complement(4195279..4196466) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acetyl-CoA acetyltransferase 4196466 pimB 2692199 pimB Rhodopseudomonas palustris CGA009 acetyl-CoA acetyltransferase NP_949052.1 4195279 R 258594 CDS NP_949053.1 39936777 2692185 complement(4196498..4198156) 1 NC_005296.1 AMP-dependent synthetase/ligase 4198156 pimA 2692185 pimA Rhodopseudomonas palustris CGA009 AMP-dependent synthetase/ligase NP_949053.1 4196498 R 258594 CDS NP_949054.1 39936778 2690821 complement(4198335..4200434) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; enoyl-CoA hydratase 4200434 pimF 2690821 pimF Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_949054.1 4198335 R 258594 CDS NP_949055.1 39936779 2690819 4200567..4201433 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; IclR family transcriptional regulator 4201433 2690819 RPA3718 Rhodopseudomonas palustris CGA009 IclR family transcriptional regulator NP_949055.1 4200567 D 258594 CDS NP_949056.1 39936780 2692206 4201464..4202264 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; high-affinity branched-chain amino acid transport system ATP-binding protein 4202264 ilvG 2692206 ilvG Rhodopseudomonas palustris CGA009 high-affinity branched-chain amino acid transport system ATP-binding protein NP_949056.1 4201464 D 258594 CDS NP_949057.1 39936781 2692587 4202261..4202974 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid transport system ATP-binding protein 4202974 ilvF 2692587 ilvF Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_949057.1 4202261 D 258594 CDS NP_949058.1 39936782 2692589 4202985..4203863 1 NC_005296.1 ABC transporter permease 4203863 2692589 RPA3721 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_949058.1 4202985 D 258594 CDS NP_949059.1 39936783 2690433 4203866..4204885 1 NC_005296.1 branched-chain amino acid transport system permease 4204885 ilvM 2690433 ilvM Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system permease NP_949059.1 4203866 D 258594 CDS NP_949060.1 39936784 2690450 4205084..4206319 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; leucine/isoleucine/valine-binding protein 4206319 2690450 RPA3723 Rhodopseudomonas palustris CGA009 leucine/isoleucine/valine-binding protein NP_949060.1 4205084 D 258594 CDS NP_949061.1 39936785 2690455 4206500..4207732 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; high-affinity leucine-isoleucine-valine transport system periplasmic binding protein 4207732 ilvK 2690455 ilvK Rhodopseudomonas palustris CGA009 high-affinity leucine-isoleucine-valine transport system periplasmic binding protein NP_949061.1 4206500 D 258594 CDS NP_949062.1 39936786 2690457 4208080..4209309 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; leucine/isoleucine/valine-binding protein 4209309 ilvJ 2690457 ilvJ Rhodopseudomonas palustris CGA009 leucine/isoleucine/valine-binding protein NP_949062.1 4208080 D 258594 CDS NP_949063.1 39936787 2691403 complement(4209434..4209934) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4209934 2691403 RPA3726 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949063.1 4209434 R 258594 CDS NP_949064.1 39936788 2692213 4210179..4211219 1 NC_005296.1 magnesium/cobalt transporter CorA 4211219 2692213 RPA3727 Rhodopseudomonas palustris CGA009 magnesium/cobalt transporter CorA NP_949064.1 4210179 D 258594 CDS NP_949065.1 39936789 2692215 4211408..4213420 1 NC_005296.1 hypothetical protein 4213420 2692215 RPA3728 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949065.1 4211408 D 258594 CDS NP_949066.1 39936790 2692227 complement(4213681..4214853) 1 NC_005296.1 peptidase M20D amidohydrolase 4214853 2692227 RPA3729 Rhodopseudomonas palustris CGA009 peptidase M20D amidohydrolase NP_949066.1 4213681 R 258594 CDS NP_949067.1 39936791 2690453 4214978..4216597 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; GMC-type oxidoreductase 4216597 2690453 RPA3730 Rhodopseudomonas palustris CGA009 GMC-type oxidoreductase NP_949067.1 4214978 D 258594 CDS NP_949068.1 39936792 2690469 4216597..4217499 1 NC_005296.1 alpha/beta hydrolase 4217499 2690469 RPA3731 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase NP_949068.1 4216597 D 258594 CDS NP_949069.1 39936793 2690468 complement(4217524..4218915) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; class III aminotransferase 4218915 argD1 2690468 argD1 Rhodopseudomonas palustris CGA009 class III aminotransferase NP_949069.1 4217524 R 258594 CDS NP_949070.1 39936794 2690471 complement(4219247..4221859) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4221859 2690471 RPA3733 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949070.1 4219247 R 258594 CDS NP_949071.1 39936795 2690489 4222189..4223109 1 NC_005296.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4223109 ispH 2690489 ispH Rhodopseudomonas palustris CGA009 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NP_949071.1 4222189 D 258594 CDS NP_949072.1 39936796 2690496 4223149..4224309 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; radical SAM family protein 4224309 2690496 RPA3735 Rhodopseudomonas palustris CGA009 radical SAM family protein NP_949072.1 4223149 D 258594 CDS NP_949073.1 39936797 2690502 complement(4224384..4225388) 1 NC_005296.1 phosphate transport system substrate-binding protein 4225388 pstS2 2690502 pstS2 Rhodopseudomonas palustris CGA009 phosphate transport system substrate-binding protein NP_949073.1 4224384 R 258594 CDS NP_949074.1 39936798 2692241 complement(4225422..4226666) 1 NC_005296.1 phosphonoacetate hydrolase 4226666 2692241 RPA3737 Rhodopseudomonas palustris CGA009 phosphonoacetate hydrolase NP_949074.1 4225422 R 258594 CDS NP_949075.1 39936799 2692236 4226824..4227714 1 NC_005296.1 LysR family transcriptional regulator 4227714 2692236 RPA3738 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_949075.1 4226824 D 258594 CDS NP_949076.1 39936800 2693018 complement(4227805..4228548) 1 NC_005296.1 hypothetical protein 4228548 2693018 RPA3739 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949076.1 4227805 R 258594 CDS NP_949077.1 39936801 2693021 complement(4228545..4230506) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; squalene cyclase 4230506 sqhC 2693021 sqhC Rhodopseudomonas palustris CGA009 squalene cyclase NP_949077.1 4228545 R 258594 CDS NP_949078.1 39936802 2693023 complement(4230540..4231796) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; amine oxidase 4231796 2693023 RPA3741 Rhodopseudomonas palustris CGA009 amine oxidase NP_949078.1 4230540 R 258594 CDS NP_949079.1 39936803 2692931 complement(4231796..4232635) 1 NC_005296.1 squalene/phytoene synthase 4232635 2692931 RPA3742 Rhodopseudomonas palustris CGA009 squalene/phytoene synthase NP_949079.1 4231796 R 258594 CDS NP_949080.1 39936804 2691711 complement(4232632..4233510) 1 NC_005296.1 squalene/phytoene synthase 4233510 2691711 RPA3743 Rhodopseudomonas palustris CGA009 squalene/phytoene synthase NP_949080.1 4232632 R 258594 CDS NP_949081.1 39936805 2692918 complement(4233715..4233954) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4233954 2692918 RPA3744 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949081.1 4233715 R 258594 CDS NP_949082.1 39936806 2692951 4234344..4234847 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4234847 2692951 RPA3745 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949082.1 4234344 D 258594 CDS NP_949083.1 39936807 2690503 complement(4234942..4237311) 1 NC_005296.1 RND superfamily transporter 4237311 2690503 RPA3746 Rhodopseudomonas palustris CGA009 RND superfamily transporter NP_949083.1 4234942 R 258594 CDS NP_949084.1 39936808 2690514 complement(4237519..4238286) 1 NC_005296.1 catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 4238286 eutC 2690514 eutC Rhodopseudomonas palustris CGA009 ethanolamine ammonia-lyase small subunit NP_949084.1 4237519 R 258594 CDS NP_949085.1 39936809 2690516 complement(4238294..4239877) 1 NC_005296.1 radical SAM family protein 4239877 2690516 RPA3748 Rhodopseudomonas palustris CGA009 radical SAM family protein NP_949085.1 4238294 R 258594 CDS NP_949086.1 39936810 2690748 complement(4240105..4241487) 1 NC_005296.1 ethanolamine ammonia lyase large subunit 4241487 eutB 2690748 eutB Rhodopseudomonas palustris CGA009 ethanolamine ammonia lyase large subunit NP_949086.1 4240105 R 258594 CDS NP_949087.1 39936811 2690747 complement(4241549..4243252) 1 NC_005296.1 methyl-accepting chemotaxis sensory transducer 4243252 2690747 RPA3750 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949087.1 4241549 R 258594 CDS NP_949088.1 39936812 2691716 complement(4243306..4243761) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4243761 2691716 RPA3751 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949088.1 4243306 R 258594 CDS NP_949089.1 39936813 2692946 complement(4243965..4244843) 1 NC_005296.1 transglutaminase 4244843 2692946 RPA3752 Rhodopseudomonas palustris CGA009 transglutaminase NP_949089.1 4243965 R 258594 CDS NP_949090.1 39936814 2690737 complement(4244840..4247341) 1 NC_005296.1 hypothetical protein 4247341 2690737 RPA3753 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949090.1 4244840 R 258594 CDS NP_949091.1 39936815 2692245 complement(4247367..4250762) 1 NC_005296.1 transglutaminase 4250762 2692245 RPA3754 Rhodopseudomonas palustris CGA009 transglutaminase NP_949091.1 4247367 R 258594 CDS NP_949092.1 39936816 2692247 complement(4251014..4251790) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; HpcH/HpaI aldolase 4251790 hpcH 2692247 hpcH Rhodopseudomonas palustris CGA009 HpcH/HpaI aldolase NP_949092.1 4251014 R 258594 CDS NP_949093.1 39936817 2692260 complement(4251974..4253059) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; malate dehydrogenase 4253059 2692260 RPA3756 Rhodopseudomonas palustris CGA009 malate dehydrogenase NP_949093.1 4251974 R 258594 CDS NP_949094.1 39936818 2693031 complement(4253100..4253639) 1 NC_005296.1 MarR family transcriptional regulator 4253639 2693031 RPA3757 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_949094.1 4253100 R 258594 CDS NP_949095.1 39936819 2690733 4253885..4254691 1 NC_005296.1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 4254691 hpcG 2690733 hpcG Rhodopseudomonas palustris CGA009 2-oxo-hepta-3-ene-1,7-dioic acid hydratase NP_949095.1 4253885 D 258594 CDS NP_949096.1 39936820 2690623 4254712..4255110 1 NC_005296.1 5-carboxymethyl-2-hydroxymuconate isomerase 4255110 hpcD 2690623 hpcD Rhodopseudomonas palustris CGA009 5-carboxymethyl-2-hydroxymuconate isomerase NP_949096.1 4254712 D 258594 CDS NP_949097.1 39936821 2690601 4255103..4256644 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase 4256644 hpcC 2690601 hpcC Rhodopseudomonas palustris CGA009 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase NP_949097.1 4255103 D 258594 CDS NP_949098.1 39936822 2690627 4256841..4257818 1 NC_005296.1 catechol 2,3-dioxygenase 4257818 2690627 RPA3761 Rhodopseudomonas palustris CGA009 catechol 2,3-dioxygenase NP_949098.1 4256841 D 258594 CDS NP_949099.1 39936823 2690626 4257949..4258821 1 NC_005296.1 2-oxo-3-ene-1,7-dioic acid hydratase 4258821 2690626 RPA3762 Rhodopseudomonas palustris CGA009 2-oxo-3-ene-1,7-dioic acid hydratase NP_949099.1 4257949 D 258594 CDS NP_949100.1 39936824 2690635 4258850..4260475 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4260475 ilvB 2690635 ilvB Rhodopseudomonas palustris CGA009 hypothetical protein NP_949100.1 4258850 D 258594 CDS NP_949101.1 39936825 2689972 complement(4260666..4261754) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phenylacetate-CoA oxygenase/reductase subunit PaaK 4261754 2689972 RPA3764 Rhodopseudomonas palustris CGA009 phenylacetate-CoA oxygenase/reductase subunit PaaK NP_949101.1 4260666 R 258594 CDS NP_949102.1 39936826 2690638 complement(4261763..4262266) 1 NC_005296.1 phenylacetate-CoA oxygenase subunit PaaJ 4262266 paaD 2690638 paaD Rhodopseudomonas palustris CGA009 phenylacetate-CoA oxygenase subunit PaaJ NP_949102.1 4261763 R 258594 CDS NP_949103.1 39936827 2692265 complement(4262260..4263036) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phenylacetate-CoA oxygenase subunit PaaI 4263036 paaC 2692265 paaC Rhodopseudomonas palustris CGA009 phenylacetate-CoA oxygenase subunit PaaI NP_949103.1 4262260 R 258594 CDS NP_949104.1 39936828 2692261 complement(4263153..4263440) 1 NC_005296.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 4263440 paaB 2692261 paaB Rhodopseudomonas palustris CGA009 phenylacetate-CoA oxygenase subunit PaaB NP_949104.1 4263153 R 258594 CDS NP_949105.1 39936829 2692269 complement(4263613..4264596) 1 NC_005296.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 4264596 paaA 2692269 paaA Rhodopseudomonas palustris CGA009 phenylacetate-CoA oxygenase subunit PaaA NP_949105.1 4263613 R 258594 CDS NP_949106.1 39936830 2693020 4264719..4265399 1 NC_005296.1 TetR family transcriptional regulator 4265399 2693020 RPA3769 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949106.1 4264719 D 258594 CDS NP_949107.1 39936831 2693041 complement(4265634..4266137) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phasin 2 4266137 2693041 RPA3770 Rhodopseudomonas palustris CGA009 phasin 2 NP_949107.1 4265634 R 258594 CDS NP_949108.1 39936832 2693038 complement(4266349..4266669) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4266669 2693038 RPA3771 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949108.1 4266349 R 258594 CDS NP_949109.1 39936833 2689915 complement(4266718..4267509) 1 NC_005296.1 hypothetical protein 4267509 2689915 RPA3772 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949109.1 4266718 R 258594 CDS NP_949110.1 39936834 2690525 complement(4267528..4267782) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4267782 2690525 RPA3773 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949110.1 4267528 R 258594 CDS NP_949111.1 39936835 2690527 complement(4267873..4269126) 1 NC_005296.1 D-amino-acid dehydrogenase 4269126 2690527 RPA3774 Rhodopseudomonas palustris CGA009 D-amino-acid dehydrogenase NP_949111.1 4267873 R 258594 CDS NP_949112.1 39936836 2690529 complement(4269405..4272509) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acriflavin resistance protein 4272509 2690529 RPA3775 Rhodopseudomonas palustris CGA009 acriflavin resistance protein NP_949112.1 4269405 R 258594 CDS NP_949113.1 39936837 2689953 complement(4272651..4273844) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; RND efflux membrane fusion protein 4273844 2689953 RPA3776 Rhodopseudomonas palustris CGA009 RND efflux membrane fusion protein NP_949113.1 4272651 R 258594 CDS NP_949114.1 39936838 2693033 complement(4273846..4274547) 1 NC_005296.1 TetR family transcriptional regulator 4274547 2693033 RPA3777 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949114.1 4273846 R 258594 CDS NP_949115.1 39936839 2693057 4274767..4275987 1 NC_005296.1 cytochrome p450-like enzyme 4275987 2693057 RPA3778 Rhodopseudomonas palustris CGA009 cytochrome p450-like enzyme NP_949115.1 4274767 D 258594 CDS NP_949116.1 39936840 2691908 4276159..4277718 1 NC_005296.1 hypothetical protein 4277718 2691908 RPA3779 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949116.1 4276159 D 258594 CDS NP_949117.1 39936841 2693050 complement(4277730..4278602) 1 NC_005296.1 hypothetical protein 4278602 2693050 RPA3780 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949117.1 4277730 R 258594 CDS NP_949118.1 39936842 2693059 4278937..4279830 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; PfkB protein 4279830 yihV 2693059 yihV Rhodopseudomonas palustris CGA009 PfkB protein NP_949118.1 4278937 D 258594 CDS NP_949119.1 39936843 2692277 complement(4279934..4281151) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4281151 2692277 RPA3782 Rhodopseudomonas palustris CGA009 FAD-dependent pyridine nucleotide-disulfide oxidoreductase NP_949119.1 4279934 R 258594 CDS NP_949120.1 39936844 2692279 complement(4281276..4282772) 1 NC_005296.1 glycosyl transferase family protein 4282772 2692279 RPA3783 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_949120.1 4281276 R 258594 CDS NP_949121.1 39936845 2692288 complement(4282780..4283916) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; dolichyl-phosphate beta-D-mannosyltransferase 4283916 2692288 RPA3784 Rhodopseudomonas palustris CGA009 dolichyl-phosphate beta-D-mannosyltransferase NP_949121.1 4282780 R 258594 CDS NP_949122.1 39936846 2693069 4284169..4284975 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4284975 2693069 RPA3785 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949122.1 4284169 D 258594 CDS NP_949123.1 39936847 2693071 4285121..4285378 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4285378 2693071 RPA3786 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949123.1 4285121 D 258594 CDS NP_949124.1 39936848 2693079 4285476..4286378 1 NC_005296.1 hypothetical protein 4286378 2693079 RPA3787 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949124.1 4285476 D 258594 CDS NP_949125.1 39936849 2692296 complement(4286411..4287583) 1 NC_005296.1 ABC transporter ATP-binding protein 4287583 2692296 RPA3788 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949125.1 4286411 R 258594 CDS NP_949126.1 39936850 2690533 complement(4287580..4288533) 1 NC_005296.1 ABC-transporter ATP-binding protein system 4288533 2690533 RPA3789 Rhodopseudomonas palustris CGA009 ABC-transporter ATP-binding protein system NP_949126.1 4287580 R 258594 CDS NP_949127.1 39936851 2691728 complement(4288530..4289333) 1 NC_005296.1 efflux protein 4289333 2691728 RPA3790 Rhodopseudomonas palustris CGA009 efflux protein NP_949127.1 4288530 R 258594 CDS NP_949128.1 39936852 2691733 complement(4289330..4290046) 1 NC_005296.1 TetR family transcriptional regulator 4290046 2691733 RPA3791 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949128.1 4289330 R 258594 CDS NP_949129.1 39936853 2693077 complement(4290117..4291256) 1 NC_005296.1 diguanylate cyclase 4291256 2693077 RPA3792 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_949129.1 4290117 R 258594 CDS NP_949130.1 39936854 2693089 complement(4291644..4292054) 1 NC_005296.1 hypothetical protein 4292054 2693089 RPA3793 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949130.1 4291644 R 258594 CDS NP_949131.1 39936855 2693091 complement(4292116..4292460) 1 NC_005296.1 hypothetical protein 4292460 2693091 RPA3794 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949131.1 4292116 R 258594 CDS NP_949132.1 39936856 2693094 complement(4292609..4293361) 1 NC_005296.1 enoyl-CoA hydratase 4293361 2693094 RPA3795 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_949132.1 4292609 R 258594 CDS NP_949133.1 39936857 2691738 4293461..4294291 1 NC_005296.1 LysR family transcriptional regulator 4294291 2691738 RPA3796 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_949133.1 4293461 D 258594 CDS NP_949134.1 39936858 2691744 complement(4294303..4295904) 1 NC_005296.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 4295904 2691744 RPA3797 Rhodopseudomonas palustris CGA009 4-diphosphocytidyl-2C-methyl-D-erythritol synthase NP_949134.1 4294303 R 258594 CDS NP_949135.1 39936859 2691739 complement(4295901..4296602) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; xanthine dehydrogenase accessory factor 4296602 2691739 RPA3798 Rhodopseudomonas palustris CGA009 xanthine dehydrogenase accessory factor NP_949135.1 4295901 R 258594 CDS NP_949136.1 39936860 2692294 complement(4296633..4296959) 1 NC_005296.1 hypothetical protein 4296959 2692294 RPA3799 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949136.1 4296633 R 258594 CDS NP_949137.1 39936861 2692307 complement(4296995..4298212) 1 NC_005296.1 von Willebrand factor A 4298212 2692307 RPA3800 Rhodopseudomonas palustris CGA009 von Willebrand factor A NP_949137.1 4296995 R 258594 CDS NP_949138.1 39936862 2692301 complement(4298538..4299440) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ATPase 4299440 2692301 RPA3801 Rhodopseudomonas palustris CGA009 ATPase NP_949138.1 4298538 R 258594 CDS NP_949139.1 39936863 2692310 complement(4299460..4300266) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbon monoxide dehydrogenase medium subunit 4300266 2692310 RPA3802 Rhodopseudomonas palustris CGA009 carbon monoxide dehydrogenase medium subunit NP_949139.1 4299460 R 258594 CDS NP_949140.1 39936864 2691901 complement(4300342..4300827) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbon-monoxide dehydrogenase small subunit 4300827 2691901 RPA3803 Rhodopseudomonas palustris CGA009 carbon-monoxide dehydrogenase small subunit NP_949140.1 4300342 R 258594 CDS NP_949141.1 39936865 2691354 complement(4301003..4301467) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4301467 2691354 RPA3804 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949141.1 4301003 R 258594 CDS NP_949142.1 39936866 2691890 complement(4301663..4302190) 1 NC_005296.1 hypothetical protein 4302190 2691890 RPA3805 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949142.1 4301663 R 258594 CDS NP_949143.1 39936867 2689541 4303024..4303941 1 NC_005296.1 inner-membrane translocator 4303941 livH 2689541 livH Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949143.1 4303024 D 258594 CDS NP_949144.1 39936868 2689546 4303954..4305285 1 NC_005296.1 inner-membrane translocator 4305285 livM 2689546 livM Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949144.1 4303954 D 258594 CDS NP_949145.1 39936869 2689545 4305282..4306118 1 NC_005296.1 branched chain amino acid ABC transporter ATP-binding protein 4306118 livG 2689545 livG Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_949145.1 4305282 D 258594 CDS NP_949146.1 39936870 2689559 4306255..4306995 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter ATP-binding protein 4306995 livF 2689559 livF Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_949146.1 4306255 D 258594 CDS NP_949147.1 39936871 2689563 4307174..4308280 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; extracellular ligand-binding receptor 4308280 livK 2689563 livK Rhodopseudomonas palustris CGA009 extracellular ligand-binding receptor NP_949147.1 4307174 D 258594 CDS NP_949148.1 39936872 2690728 complement(4308492..4308779) 1 NC_005296.1 excinuclease ABC subunit C 4308779 2690728 RPA3811 Rhodopseudomonas palustris CGA009 excinuclease ABC subunit C NP_949148.1 4308492 R 258594 CDS NP_949149.1 39936873 2689896 complement(4309058..4309792) 1 NC_005296.1 cytochrome c biogenesis protein transmembrane region 4309792 2689896 RPA3812 Rhodopseudomonas palustris CGA009 cytochrome c biogenesis protein transmembrane region NP_949149.1 4309058 R 258594 CDS NP_949150.1 39936874 2689716 4309894..4310943 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; T4 family peptidase 4310943 2689716 RPA3813 Rhodopseudomonas palustris CGA009 T4 family peptidase NP_949150.1 4309894 D 258594 CDS NP_949151.1 39936875 2689781 complement(4311084..4311854) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; calcium-binding EF-hand 4311854 2689781 RPA3814 Rhodopseudomonas palustris CGA009 calcium-binding EF-hand NP_949151.1 4311084 R 258594 CDS NP_949152.1 39936876 2689922 4312124..4312822 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ribulose-phosphate 3-epimerase 4312822 cbbE 2689922 cbbE Rhodopseudomonas palustris CGA009 ribulose-phosphate 3-epimerase NP_949152.1 4312124 D 258594 CDS NP_949153.1 39936877 2689918 complement(4312829..4313380) 1 NC_005296.1 hypothetical protein 4313380 2689918 RPA3816 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949153.1 4312829 R 258594 CDS NP_949154.1 39936878 2690719 4313465..4314772 1 NC_005296.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 4314772 purB 2690719 purB Rhodopseudomonas palustris CGA009 adenylosuccinate lyase NP_949154.1 4313465 D 258594 CDS NP_949155.1 39936879 2689767 complement(4315019..4315720) 1 NC_005296.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 4315720 purL 2689767 purL Rhodopseudomonas palustris CGA009 phosphoribosylformylglycinamidine synthase I NP_949155.1 4315019 R 258594 CDS NP_949156.1 39936880 2689772 complement(4315777..4316016) 1 NC_005296.1 hypothetical protein 4316016 2689772 RPA3819 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949156.1 4315777 R 258594 CDS NP_949157.1 39936881 2689990 complement(4316040..4316285) 1 NC_005296.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 4316285 2689990 RPA3820 Rhodopseudomonas palustris CGA009 phosphoribosylformylglycinamidine synthase subunit PurS NP_949157.1 4316040 R 258594 CDS NP_949158.1 39936882 2690715 complement(4316467..4317234) 1 NC_005296.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 4317234 purC2 2690715 purC2 Rhodopseudomonas palustris CGA009 phosphoribosylaminoimidazole-succinocarboxamide synthase NP_949158.1 4316467 R 258594 CDS NP_949159.1 39936883 2690714 4317533..4317856 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4317856 2690714 RPA3822 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949159.1 4317533 D 258594 CDS NP_949160.1 39936884 2689992 4318428..4319102 1 NC_005296.1 hypothetical protein 4319102 2689992 RPA3823 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949160.1 4318428 D 258594 CDS NP_949161.1 39936885 2689999 complement(4319994..4320344) 1 NC_005296.1 hypothetical protein 4320344 2689999 RPA3824 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949161.1 4319994 R 258594 CDS NP_949162.1 39936886 2690711 complement(4320433..4321281) 1 NC_005296.1 hypothetical protein 4321281 2690711 RPA3825 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949162.1 4320433 R 258594 CDS NP_949163.1 39936887 2689770 4321678..4322034 1 NC_005296.1 hypothetical protein 4322034 2689770 RPA3826 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949163.1 4321678 D 258594 CDS NP_949164.1 39936888 2690016 4322038..4322361 1 NC_005296.1 hypothetical protein 4322361 2690016 RPA3827 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949164.1 4322038 D 258594 CDS NP_949165.1 39936889 2690709 4322486..4322683 1 NC_005296.1 XRE family transcriptional regulator 4322683 2690709 RPA3828 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_949165.1 4322486 D 258594 CDS NP_949166.1 39936890 2690023 complement(4323708..4324238) 1 NC_005296.1 activates RNA polymerase to cleave back-tracked RNA during elongational pausing; transcription elongation factor regulatory protein 4324238 2690023 RPA3829 Rhodopseudomonas palustris CGA009 transcription elongation factor regulatory protein NP_949166.1 4323708 R 258594 CDS NP_949167.1 39936891 2690019 complement(4324251..4324745) 1 NC_005296.1 G/U mismatch-specific DNA glycosylase 4324745 2690019 RPA3830 Rhodopseudomonas palustris CGA009 G/U mismatch-specific DNA glycosylase NP_949167.1 4324251 R 258594 CDS NP_949168.1 39936892 2690030 complement(4324785..4325186) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4325186 2690030 RPA3831 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949168.1 4324785 R 258594 CDS NP_949169.1 39936893 2690021 complement(4325281..4326351) 1 NC_005296.1 diguanylate cyclase 4326351 2690021 RPA3832 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_949169.1 4325281 R 258594 CDS NP_949170.1 39936894 2690033 complement(4326454..4327668) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; tRNA/rRNA methyltransferase 4327668 rrm2 2690033 rrm2 Rhodopseudomonas palustris CGA009 tRNA/rRNA methyltransferase NP_949170.1 4326454 R 258594 CDS NP_949171.1 39936895 2690037 4328043..4329269 1 NC_005296.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 4329269 idh 2690037 idh Rhodopseudomonas palustris CGA009 isocitrate dehydrogenase NP_949171.1 4328043 D 258594 CDS NP_949172.1 39936896 2690044 complement(4329349..4330659) 1 NC_005296.1 hypothetical protein 4330659 2690044 RPA3835 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949172.1 4329349 R 258594 CDS NP_949173.1 39936897 2689372 complement(4331612..4332532) 1 NC_005296.1 integrase catalytic subunit 4332532 2689372 RPA3836 Rhodopseudomonas palustris CGA009 integrase catalytic subunit NP_949173.1 4331612 R 258594 CDS NP_949174.1 39936898 2689371 complement(4332529..4332795) 1 NC_005296.1 insertion element ISR1 4332795 2689371 RPA3837 Rhodopseudomonas palustris CGA009 insertion element ISR1 NP_949174.1 4332529 R 258594 CDS NP_949175.1 39936899 2689374 4333101..4333433 1 NC_005296.1 hypothetical protein 4333433 2689374 RPA3838 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949175.1 4333101 D 258594 CDS NP_949176.1 39936900 2689365 4333604..4334443 1 NC_005296.1 transcriptional regulator PchR 4334443 pchR 2689365 pchR Rhodopseudomonas palustris CGA009 transcriptional regulator PchR NP_949176.1 4333604 D 258594 CDS NP_949177.1 39936901 2689376 4334584..4336893 1 NC_005296.1 hydroxamate-type ferrisiderophore receptor 4336893 2689376 RPA3840 Rhodopseudomonas palustris CGA009 hydroxamate-type ferrisiderophore receptor NP_949177.1 4334584 D 258594 CDS NP_949178.1 39936902 2692586 4336914..4337444 1 NC_005296.1 hypothetical protein 4337444 2692586 RPA3841 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949178.1 4336914 D 258594 CDS NP_949179.1 39936903 2692574 4337441..4338550 1 NC_005296.1 hypothetical protein 4338550 2692574 RPA3842 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949179.1 4337441 D 258594 CDS NP_949180.1 39936904 2689960 complement(4338580..4340313) 1 NC_005296.1 potassium efflux system protein 4340313 kefC 2689960 kefC Rhodopseudomonas palustris CGA009 potassium efflux system protein NP_949180.1 4338580 R 258594 CDS NP_949181.1 39936905 2689754 4340497..4342275 1 NC_005296.1 sodium/hydrogen exchanger 4342275 kefB 2689754 kefB Rhodopseudomonas palustris CGA009 sodium/hydrogen exchanger NP_949181.1 4340497 D 258594 CDS NP_949182.1 39936906 2692570 4342505..4344463 1 NC_005296.1 membrane transporter 4344463 2692570 RPA3845 Rhodopseudomonas palustris CGA009 membrane transporter NP_949182.1 4342505 D 258594 CDS NP_949183.1 39936907 2691749 complement(4344559..4345320) 1 NC_005296.1 N-acetyltransferase GCN5 4345320 2691749 RPA3846 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_949183.1 4344559 R 258594 CDS NP_949184.1 39936908 2691966 complement(4345322..4347991) 1 NC_005296.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 4347991 alaS 2691966 alaS Rhodopseudomonas palustris CGA009 alanyl-tRNA synthetase NP_949184.1 4345322 R 258594 CDS NP_949185.1 39936909 2691973 4348444..4349592 1 NC_005296.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 4349592 gcvT 2691973 gcvT Rhodopseudomonas palustris CGA009 glycine cleavage system aminomethyltransferase T NP_949185.1 4348444 D 258594 CDS NP_949186.1 39936910 2691976 4349602..4349967 1 NC_005296.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 4349967 2691976 RPA3849 Rhodopseudomonas palustris CGA009 glycine cleavage system protein H NP_949186.1 4349602 D 258594 CDS NP_949187.1 39936911 2691977 4350069..4353041 1 NC_005296.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 4353041 gcvP 2691977 gcvP Rhodopseudomonas palustris CGA009 glycine dehydrogenase NP_949187.1 4350069 D 258594 CDS NP_949188.1 39936912 2691987 complement(4353490..4354581) 1 NC_005296.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 4354581 recA 2691987 recA Rhodopseudomonas palustris CGA009 recombinase A NP_949188.1 4353490 R 258594 CDS NP_949189.1 39936913 2691124 complement(4354998..4355564) 1 NC_005296.1 hypothetical protein 4355564 2691124 RPA3852 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949189.1 4354998 R 258594 CDS NP_949190.1 39936914 2691991 4355837..4356952 1 NC_005296.1 hypothetical protein 4356952 2691991 RPA3853 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949190.1 4355837 D 258594 CDS NP_949191.1 39936915 2692001 4357103..4357480 1 NC_005296.1 hypothetical protein 4357480 2692001 RPA3854 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949191.1 4357103 D 258594 CDS NP_949192.1 39936916 2692568 4357821..4358735 1 NC_005296.1 hypothetical protein 4358735 2692568 RPA3855 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949192.1 4357821 D 258594 CDS NP_949193.1 39936917 2691998 4358739..4359098 1 NC_005296.1 hypothetical protein 4359098 2691998 RPA3856 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949193.1 4358739 D 258594 CDS NP_949194.1 39936918 2692567 complement(4359262..4361286) 1 NC_005296.1 esterase 4361286 2692567 RPA3857 Rhodopseudomonas palustris CGA009 esterase NP_949194.1 4359262 R 258594 CDS NP_949195.1 39936919 2692012 4361678..4361935 1 NC_005296.1 hypothetical protein 4361935 2692012 RPA3858 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949195.1 4361678 D 258594 CDS NP_949196.1 39936920 2692004 complement(4361953..4362348) 1 NC_005296.1 hypothetical protein 4362348 2692004 RPA3859 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949196.1 4361953 R 258594 CDS NP_949197.1 39936921 2692034 4362408..4362581 1 NC_005296.1 hypothetical protein 4362581 2692034 RPA3860 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949197.1 4362408 D 258594 CDS NP_949198.1 39936922 2692561 4362966..4363352 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4363352 2692561 RPA3861 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949198.1 4362966 D 258594 CDS NP_949199.1 39936923 2692050 complement(4363538..4363834) 1 NC_005296.1 hypothetical protein 4363834 2692050 RPA3862 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949199.1 4363538 R 258594 CDS NP_949200.1 39936924 2692040 complement(4363862..4364614) 1 NC_005296.1 Crp/Fnr family transcriptional regulator 4364614 2692040 RPA3863 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_949200.1 4363862 R 258594 CDS NP_949201.1 39936925 2692041 complement(4364688..4364954) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4364954 2692041 RPA3864 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949201.1 4364688 R 258594 CDS NP_949202.1 39936926 2692065 4365165..4365713 1 NC_005296.1 thioesterase 4365713 2692065 RPA3865 Rhodopseudomonas palustris CGA009 thioesterase NP_949202.1 4365165 D 258594 CDS NP_949203.1 39936927 2692529 complement(4365768..4367363) 1 NC_005296.1 hypothetical protein 4367363 2692529 RPA3866 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949203.1 4365768 R 258594 CDS NP_949204.1 39936928 2692075 4367449..4368609 1 NC_005296.1 hypothetical protein 4368609 2692075 RPA3867 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949204.1 4367449 D 258594 CDS NP_949205.1 39936929 2692043 complement(4368610..4369275) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DSBA oxidoreductase 4369275 2692043 RPA3868 Rhodopseudomonas palustris CGA009 DSBA oxidoreductase NP_949205.1 4368610 R 258594 CDS NP_949206.1 39936930 2692076 complement(4369348..4370169) 1 NC_005296.1 XRE family transcriptional regulator 4370169 2692076 RPA3869 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_949206.1 4369348 R 258594 CDS NP_949207.1 39936931 2692083 4370305..4370718 1 NC_005296.1 hypothetical protein 4370718 2692083 RPA3870 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949207.1 4370305 D 258594 CDS NP_949208.1 39936932 2692091 complement(4370841..4371578) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nuclear protein SET 4371578 mes-4 2692091 mes-4 Rhodopseudomonas palustris CGA009 nuclear protein SET NP_949208.1 4370841 R 258594 CDS NP_949209.1 39936933 2692097 4371720..4372349 1 NC_005296.1 hypothetical protein 4372349 2692097 RPA3872 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949209.1 4371720 D 258594 CDS NP_949210.1 39936934 2692089 4372500..4373093 1 NC_005296.1 hypothetical protein 4373093 2692089 RPA3873 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949210.1 4372500 D 258594 CDS NP_949211.1 39936935 2692098 complement(4373101..4373811) 1 NC_005296.1 hypothetical protein 4373811 2692098 RPA3874 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949211.1 4373101 R 258594 CDS NP_949212.1 39936936 2692107 4374071..4374367 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4374367 2692107 RPA3875 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949212.1 4374071 D 258594 CDS NP_949213.1 39936937 2692109 complement(4374559..4376214) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; fumarate hydratase class I 4376214 fumA 2692109 fumA Rhodopseudomonas palustris CGA009 fumarate hydratase class I NP_949213.1 4374559 R 258594 CDS NP_949214.1 39936938 2692112 complement(4377765..4378049) 1 NC_005296.1 hypothetical protein 4378049 2692112 RPA3877 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949214.1 4377765 R 258594 CDS NP_949215.1 39936939 2692121 4378147..4378641 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4378641 2692121 RPA3878 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949215.1 4378147 D 258594 CDS NP_949216.1 39936940 2692118 4379170..4379529 1 NC_005296.1 hypothetical protein 4379529 2692118 RPA3879 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949216.1 4379170 D 258594 CDS NP_949217.1 39936941 2690582 complement(4379688..4380398) 1 NC_005296.1 glutathione S-transferase 4380398 2690582 RPA3880 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_949217.1 4379688 R 258594 CDS NP_949218.1 39936942 2692137 complement(4380519..4381532) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; import inner membrane translocase subunit Tim44 4381532 2692137 RPA3881 Rhodopseudomonas palustris CGA009 import inner membrane translocase subunit Tim44 NP_949218.1 4380519 R 258594 CDS NP_949219.1 39936943 2692138 complement(4381871..4384519) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sensor histidine kinase 4384519 cckA 2692138 cckA Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_949219.1 4381871 R 258594 CDS NP_949220.1 39936944 2691847 complement(4384623..4385696) 1 NC_005296.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 4385696 flhB 2691847 flhB Rhodopseudomonas palustris CGA009 flagellar biosynthesis protein FlhB NP_949220.1 4384623 R 258594 CDS NP_949221.1 39936945 2691850 complement(4385723..4386490) 1 NC_005296.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 4386490 fliR 2691850 fliR Rhodopseudomonas palustris CGA009 flagellar biosynthesis protein FliR NP_949221.1 4385723 R 258594 CDS NP_949222.1 39936946 2690846 complement(4386597..4386860) 1 NC_005296.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 4386860 fliQ 2690846 fliQ Rhodopseudomonas palustris CGA009 flagellar biosynthesis protein FliQ NP_949222.1 4386597 R 258594 CDS NP_949223.1 39936947 2690847 complement(4387018..4387323) 1 NC_005296.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagella; flagellar hook-basal body protein FliE 4387323 fliE 2690847 fliE Rhodopseudomonas palustris CGA009 flagellar hook-basal body protein FliE NP_949223.1 4387018 R 258594 CDS NP_949224.1 39936948 2690854 complement(4387359..4387784) 1 NC_005296.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 4387784 flgC 2690854 flgC Rhodopseudomonas palustris CGA009 flagellar basal body rod protein FlgC NP_949224.1 4387359 R 258594 CDS NP_949225.1 39936949 2691750 complement(4387806..4388312) 1 NC_005296.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar basal-body rod protein FlgB 4388312 flgB 2691750 flgB Rhodopseudomonas palustris CGA009 flagellar basal-body rod protein FlgB NP_949225.1 4387806 R 258594 CDS NP_949226.1 39936950 2691051 4388533..4389687 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4389687 2691051 RPA3889 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949226.1 4388533 D 258594 CDS NP_949227.1 39936951 2692779 4389684..4390448 1 NC_005296.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 4390448 fliP 2692779 fliP Rhodopseudomonas palustris CGA009 flagellar biosynthesis protein FliP NP_949227.1 4389684 D 258594 CDS NP_949228.1 39936952 2691054 complement(4390618..4394346) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4394346 2691054 RPA3891 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949228.1 4390618 R 258594 CDS NP_949229.1 39936953 2690619 4394823..4395152 1 NC_005296.1 hypothetical protein 4395152 2690619 RPA3892 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949229.1 4394823 D 258594 CDS NP_949230.1 39936954 2691149 complement(4395182..4396705) 1 NC_005296.1 carboxylesterase 4396705 2691149 RPA3893 Rhodopseudomonas palustris CGA009 carboxylesterase NP_949230.1 4395182 R 258594 CDS NP_949231.1 39936955 2690604 complement(4396731..4397354) 1 NC_005296.1 TetR family transcriptional regulator 4397354 2690604 RPA3894 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949231.1 4396731 R 258594 CDS NP_949232.1 39936956 2691756 complement(4397532..4398296) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4398296 2691756 RPA3895 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949232.1 4397532 R 258594 CDS NP_949233.1 39936957 2690591 complement(4398293..4398721) 1 NC_005296.1 hypothetical protein 4398721 2690591 RPA3896 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949233.1 4398293 R 258594 CDS NP_949234.1 39936958 2692767 complement(4398718..4399920) 1 NC_005296.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar motor switch protein FliM 4399920 fliM 2692767 fliM Rhodopseudomonas palustris CGA009 flagellar motor switch protein FliM NP_949234.1 4398718 R 258594 CDS NP_949235.1 39936959 2692762 complement(4399927..4400427) 1 NC_005296.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL 4400427 fliL 2692762 fliL Rhodopseudomonas palustris CGA009 flagellar basal body protein FliL NP_949235.1 4399927 R 258594 CDS NP_949236.1 39936960 2691760 4400792..4401553 1 NC_005296.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgF 4401553 flgF 2691760 flgF Rhodopseudomonas palustris CGA009 flagellar basal body rod protein FlgF NP_949236.1 4400792 D 258594 CDS NP_949237.1 39936961 2691753 4401566..4402354 1 NC_005296.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 4402354 flgG 2691753 flgG Rhodopseudomonas palustris CGA009 flagellar basal body rod protein FlgG NP_949237.1 4401566 D 258594 CDS NP_949238.1 39936962 2691018 4402367..4403395 1 NC_005296.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 4403395 flgA 2691018 flgA Rhodopseudomonas palustris CGA009 flagellar basal body P-ring biosynthesis protein FlgA NP_949238.1 4402367 D 258594 CDS NP_949239.1 39936963 2690758 4403401..4404159 1 NC_005296.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 4404159 flgH 2690758 flgH Rhodopseudomonas palustris CGA009 flagellar basal body L-ring protein NP_949239.1 4403401 D 258594 CDS NP_949240.1 39936964 2691202 complement(4404420..4407572) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; RND multidrug efflux transporter MexD 4407572 mexD3 2691202 mexD3 Rhodopseudomonas palustris CGA009 RND multidrug efflux transporter MexD NP_949240.1 4404420 R 258594 CDS NP_949241.1 39936965 2692738 complement(4407585..4408778) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; RND multidrug efflux membrane fusion protein MexC 4408778 mexC3 2692738 mexC3 Rhodopseudomonas palustris CGA009 RND multidrug efflux membrane fusion protein MexC NP_949241.1 4407585 R 258594 CDS NP_949242.1 39936966 2691204 4408925..4409488 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TetR family transcriptional regulator 4409488 2691204 RPA3905 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949242.1 4408925 D 258594 CDS NP_949243.1 39936967 2691684 4409685..4409966 1 NC_005296.1 hypothetical protein 4409966 2691684 RPA3906 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949243.1 4409685 D 258594 CDS NP_949244.1 39936968 2693006 complement(4410076..4410504) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; transcriptional regulators TraR/DksA family 4410504 dksA 2693006 dksA Rhodopseudomonas palustris CGA009 transcriptional regulators TraR/DksA family NP_949244.1 4410076 R 258594 CDS NP_949245.1 39936969 2693008 complement(4410625..4411035) 1 NC_005296.1 regulator of the sigma 54 transcriptional activator FlbD; represses FlbD when the class II flagellar structure is absent and activates FlbD when the structure is present; flagellar assembly regulator FliX 4411035 fliX 2693008 fliX Rhodopseudomonas palustris CGA009 flagellar assembly regulator FliX NP_949245.1 4410625 R 258594 CDS NP_949246.1 39936970 2691825 4411334..4412455 1 NC_005296.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 4412455 flgI 2691825 flgI Rhodopseudomonas palustris CGA009 flagellar basal body P-ring biosynthesis protein FlgA NP_949246.1 4411334 D 258594 CDS NP_949247.1 39936971 2691214 4412452..4412790 1 NC_005296.1 chemotactic signal-response protein CheL 4412790 2691214 RPA3910 Rhodopseudomonas palustris CGA009 chemotactic signal-response protein CheL NP_949247.1 4412452 D 258594 CDS NP_949248.1 39936972 2692717 4412808..4413299 1 NC_005296.1 hypothetical protein 4413299 2692717 RPA3911 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949248.1 4412808 D 258594 CDS NP_949249.1 39936973 2692721 4413479..4413850 1 NC_005296.1 hypothetical protein 4413850 2692721 RPA3912 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949249.1 4413479 D 258594 CDS NP_949250.1 39936974 2692695 complement(4413967..4414335) 1 NC_005296.1 acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar biosynthesis regulatory protein FlaF 4414335 flaF 2692695 flaF Rhodopseudomonas palustris CGA009 flagellar biosynthesis regulatory protein FlaF NP_949250.1 4413967 R 258594 CDS NP_949251.1 39936975 2691227 complement(4414339..4414719) 1 NC_005296.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA; Bradyrhizobium has one thick and several thin flagella, the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 4414719 flbT 2691227 flbT Rhodopseudomonas palustris CGA009 flagellar biosynthesis repressor FlbT NP_949251.1 4414339 R 258594 CDS NP_949252.1 39936976 2691221 complement(4414935..4417595) 1 NC_005296.1 structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellin 4417595 2691221 RPA3915 Rhodopseudomonas palustris CGA009 flagellin NP_949252.1 4414935 R 258594 CDS NP_949253.1 39936977 2692697 4418117..4420264 1 NC_005296.1 hypothetical protein 4420264 2692697 RPA3916 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949253.1 4418117 D 258594 CDS NP_949254.1 39936978 2691225 complement(4420277..4422079) 1 NC_005296.1 acetolactate synthase large subunit 4422079 2691225 RPA3917 Rhodopseudomonas palustris CGA009 acetolactate synthase large subunit NP_949254.1 4420277 R 258594 CDS NP_949255.1 39936979 2690899 complement(4422103..4422909) 1 NC_005296.1 hypothetical protein 4422909 2690899 RPA3918 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949255.1 4422103 R 258594 CDS NP_949256.1 39936980 2691015 complement(4422906..4423826) 1 NC_005296.1 mannose-1-phosphate guanylyltransferase 4423826 2691015 RPA3919 Rhodopseudomonas palustris CGA009 mannose-1-phosphate guanylyltransferase NP_949256.1 4422906 R 258594 CDS NP_949257.1 39936981 2691021 complement(4423823..4425307) 1 NC_005296.1 ADP-heptose synthase 4425307 2691021 RPA3920 Rhodopseudomonas palustris CGA009 ADP-heptose synthase NP_949257.1 4423823 R 258594 CDS NP_949258.1 39936982 2691947 complement(4425313..4426368) 1 NC_005296.1 acetoin dehydrogenase (TPP-dependent) subunit beta 4426368 2691947 RPA3921 Rhodopseudomonas palustris CGA009 acetoin dehydrogenase (TPP-dependent) subunit beta NP_949258.1 4425313 R 258594 CDS NP_949259.1 39936983 2690957 complement(4426519..4427571) 1 NC_005296.1 acetoin dehydrogenase (TPP-dependent) subunit beta 4427571 2690957 RPA3922 Rhodopseudomonas palustris CGA009 acetoin dehydrogenase (TPP-dependent) subunit beta NP_949259.1 4426519 R 258594 CDS NP_949260.1 39936984 2691233 complement(4427582..4428559) 1 NC_005296.1 acetoin dehydrogenase (TPP-dependent) subunit alpha 4428559 2691233 RPA3923 Rhodopseudomonas palustris CGA009 acetoin dehydrogenase (TPP-dependent) subunit alpha NP_949260.1 4427582 R 258594 CDS NP_949261.1 39936985 2691239 complement(4428556..4429215) 1 NC_005296.1 hypothetical protein 4429215 2691239 RPA3924 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949261.1 4428556 R 258594 CDS NP_949262.1 39936986 2690967 complement(4429224..4430261) 1 NC_005296.1 dTDP-glucose 4,6-dehydratase 4430261 2690967 RPA3925 Rhodopseudomonas palustris CGA009 dTDP-glucose 4,6-dehydratase NP_949262.1 4429224 R 258594 CDS NP_949263.1 39936987 2691235 complement(4430258..4431196) 1 NC_005296.1 sugar-nucleotide epimerase/dehydratase 4431196 2691235 RPA3926 Rhodopseudomonas palustris CGA009 sugar-nucleotide epimerase/dehydratase NP_949263.1 4430258 R 258594 CDS NP_949264.1 39936988 2690928 complement(4431338..4432006) 1 NC_005296.1 phosphoheptose isomerase 4432006 2690928 RPA3927 Rhodopseudomonas palustris CGA009 phosphoheptose isomerase NP_949264.1 4431338 R 258594 CDS NP_949265.1 39936989 2689911 complement(4432129..4433091) 1 NC_005296.1 hypothetical protein 4433091 2689911 RPA3928 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949265.1 4432129 R 258594 CDS NP_949266.1 39936990 2691042 complement(4433205..4435871) 1 NC_005296.1 structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellin 4435871 2691042 RPA3929 Rhodopseudomonas palustris CGA009 flagellin NP_949266.1 4433205 R 258594 CDS NP_949267.1 39936991 2691242 complement(4436179..4437786) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4437786 2691242 RPA3930 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949267.1 4436179 R 258594 CDS NP_949268.1 39936992 2689962 complement(4437795..4439666) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; flagellar hook-associated protein 4439666 flgK2 2689962 flgK2 Rhodopseudomonas palustris CGA009 flagellar hook-associated protein NP_949268.1 4437795 R 258594 CDS NP_949269.1 39936993 2691248 complement(4439705..4441501) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; flagellar hook protein flgE 4441501 2691248 RPA3932 Rhodopseudomonas palustris CGA009 flagellar hook protein flgE NP_949269.1 4439705 R 258594 CDS NP_949270.1 39936994 2690051 4441771..4444836 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sensor histidine kinase 4444836 2690051 RPA3933 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_949270.1 4441771 D 258594 CDS NP_949271.1 39936995 2690055 4444803..4446011 1 NC_005296.1 sensor histidine kinase/response regulator 4446011 2690055 RPA3934 Rhodopseudomonas palustris CGA009 sensor histidine kinase/response regulator NP_949271.1 4444803 D 258594 CDS NP_949272.1 39936996 2690069 4446201..4446473 1 NC_005296.1 hypothetical protein 4446473 2690069 RPA3935 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949272.1 4446201 D 258594 CDS NP_949273.1 39936997 2690074 complement(4446510..4448003) 1 NC_005296.1 hypothetical protein 4448003 2690074 RPA3936 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949273.1 4446510 R 258594 CDS NP_949274.1 39936998 2692318 complement(4448155..4448652) 1 NC_005296.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 4448652 2692318 RPA3937 Rhodopseudomonas palustris CGA009 methionine sulfoxide reductase B NP_949274.1 4448155 R 258594 CDS NP_949275.1 39936999 2692311 complement(4448786..4450246) 1 NC_005296.1 FAD dependent oxidoreductase 4450246 2692311 RPA3938 Rhodopseudomonas palustris CGA009 FAD dependent oxidoreductase NP_949275.1 4448786 R 258594 CDS NP_949276.1 39937000 2691070 4450387..4450917 1 NC_005296.1 phosphohistidine phosphatase SixA 4450917 2691070 RPA3939 Rhodopseudomonas palustris CGA009 phosphohistidine phosphatase SixA NP_949276.1 4450387 D 258594 CDS NP_949277.1 39937001 2692325 4450961..4451392 1 NC_005296.1 hypothetical protein 4451392 2692325 RPA3940 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949277.1 4450961 D 258594 CDS NP_949278.1 39937002 2692312 complement(4451414..4452010) 1 NC_005296.1 hypothetical protein 4452010 2692312 RPA3941 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949278.1 4451414 R 258594 CDS NP_949279.1 39937003 2692320 4452159..4452599 1 NC_005296.1 hypothetical protein 4452599 2692320 RPA3942 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949279.1 4452159 D 258594 CDS NP_949280.1 39937004 2692330 complement(4452700..4453206) 1 NC_005296.1 hypothetical protein 4453206 2692330 RPA3943 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949280.1 4452700 R 258594 CDS NP_949281.1 39937005 2691088 4453613..4454704 1 NC_005296.1 hypothetical protein 4454704 2691088 RPA3944 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949281.1 4453613 D 258594 CDS NP_949282.1 39937006 2691086 4454765..4456852 1 NC_005296.1 hypothetical protein 4456852 2691086 RPA3945 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949282.1 4454765 D 258594 CDS NP_949283.1 39937007 2691090 complement(4456952..4458091) 1 NC_005296.1 hypothetical protein 4458091 2691090 RPA3946 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949283.1 4456952 R 258594 CDS NP_949284.1 39937008 2691099 complement(4458271..4458933) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4458933 2691099 RPA3947 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949284.1 4458271 R 258594 CDS NP_949285.1 39937009 2691101 complement(4459023..4460288) 1 NC_005296.1 hypothetical protein 4460288 2691101 RPA3948 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949285.1 4459023 R 258594 CDS NP_949286.1 39937010 2691696 complement(4460299..4461624) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glycosyltransferase WbpX 4461624 wbpX 2691696 wbpX Rhodopseudomonas palustris CGA009 glycosyltransferase WbpX NP_949286.1 4460299 R 258594 CDS NP_949287.1 39937011 2689984 4461777..4462838 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glycosyl transferase family protein 4462838 2689984 RPA3950 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_949287.1 4461777 D 258594 CDS NP_949288.1 39937012 2690971 4462907..4463893 1 NC_005296.1 GDP-mannose 4,6-dehydratase 4463893 gmd 2690971 gmd Rhodopseudomonas palustris CGA009 GDP-mannose 4,6-dehydratase NP_949288.1 4462907 D 258594 CDS NP_949289.1 39937013 2690965 4463893..4464876 1 NC_005296.1 oxidoreductase Rmd 4464876 2690965 RPA3952 Rhodopseudomonas palustris CGA009 oxidoreductase Rmd NP_949289.1 4463893 D 258594 CDS NP_949290.1 39937014 2689847 complement(4464910..4466172) 1 NC_005296.1 chloride channel protein 4466172 2689847 RPA3953 Rhodopseudomonas palustris CGA009 chloride channel protein NP_949290.1 4464910 R 258594 CDS NP_949291.1 39937015 2690535 complement(4466340..4467368) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; thioredoxin reductase 4467368 2690535 RPA3954 Rhodopseudomonas palustris CGA009 thioredoxin reductase NP_949291.1 4466340 R 258594 CDS NP_949292.1 39937016 2689932 4467683..4467985 1 NC_005296.1 hypothetical protein 4467985 2689932 RPA3955 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949292.1 4467683 D 258594 CDS NP_949293.1 39937017 2689967 complement(4468165..4468485) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ferredoxin 4468485 2689967 RPA3956 Rhodopseudomonas palustris CGA009 ferredoxin NP_949293.1 4468165 R 258594 CDS NP_949294.1 39937018 2689955 complement(4468582..4468941) 1 NC_005296.1 Hpt domain-containing protein 4468941 2689955 RPA3957 Rhodopseudomonas palustris CGA009 Hpt domain-containing protein NP_949294.1 4468582 R 258594 CDS NP_949295.1 39937019 2689394 4469382..4475459 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4475459 2689394 RPA3958 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949295.1 4469382 D 258594 CDS NP_949296.1 39937020 2689362 4475883..4477367 1 NC_005296.1 amidase 4477367 2689362 RPA3959 Rhodopseudomonas palustris CGA009 amidase NP_949296.1 4475883 D 258594 CDS NP_949297.1 39937021 2689393 4477612..4478415 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4478415 2689393 RPA3960 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949297.1 4477612 D 258594 CDS NP_949298.1 39937022 2690089 complement(4478600..4479493) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4479493 2690089 RPA3961 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949298.1 4478600 R 258594 CDS NP_949299.1 39937023 2690087 complement(4479631..4480404) 1 NC_005296.1 ABC transporter ATP-binding protein 4480404 2690087 RPA3962 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949299.1 4479631 R 258594 CDS NP_949300.1 39937024 2690092 complement(4480407..4481558) 1 NC_005296.1 hypothetical protein 4481558 2690092 RPA3963 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949300.1 4480407 R 258594 CDS NP_949301.1 39937025 2690547 4481663..4482658 1 NC_005296.1 muconate cycloisomerase 4482658 2690547 RPA3964 Rhodopseudomonas palustris CGA009 muconate cycloisomerase NP_949301.1 4481663 D 258594 CDS NP_949302.1 39937026 2690545 complement(4482628..4483836) 1 NC_005296.1 major facilitator transporter 4483836 2690545 RPA3965 Rhodopseudomonas palustris CGA009 major facilitator transporter NP_949302.1 4482628 R 258594 CDS NP_949303.1 39937027 2690101 4483913..4485370 1 NC_005296.1 hypothetical protein 4485370 2690101 RPA3966 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949303.1 4483913 D 258594 CDS NP_949304.1 39937028 2690103 complement(4485400..4486395) 1 NC_005296.1 pyridoxal-5'-phosphate-dependent enzyme subunit beta 4486395 2690103 RPA3967 Rhodopseudomonas palustris CGA009 pyridoxal-5'-phosphate-dependent enzyme subunit beta NP_949304.1 4485400 R 258594 CDS NP_949305.1 39937029 2689923 complement(4486445..4487500) 1 NC_005296.1 group 1 glycosyl transferase 4487500 2689923 RPA3968 Rhodopseudomonas palustris CGA009 group 1 glycosyl transferase NP_949305.1 4486445 R 258594 CDS NP_949306.1 39937030 2690561 complement(4487500..4488297) 1 NC_005296.1 metallophosphoesterase 4488297 2690561 RPA3969 Rhodopseudomonas palustris CGA009 metallophosphoesterase NP_949306.1 4487500 R 258594 CDS NP_949307.1 39937031 2690105 complement(4488351..4489007) 1 NC_005296.1 phosphatidylethanolamine N-methyltransferase 4489007 2690105 RPA3970 Rhodopseudomonas palustris CGA009 phosphatidylethanolamine N-methyltransferase NP_949307.1 4488351 R 258594 CDS NP_949308.1 39937032 2690111 complement(4489100..4489900) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphomethylpyrimidine kinase 4489900 thiD 2690111 thiD Rhodopseudomonas palustris CGA009 phosphomethylpyrimidine kinase NP_949308.1 4489100 R 258594 CDS NP_949309.1 39937033 2690114 complement(4490291..4491220) 1 NC_005296.1 diheme cytochrome c-553 4491220 2690114 RPA3972 Rhodopseudomonas palustris CGA009 diheme cytochrome c-553 NP_949309.1 4490291 R 258594 CDS NP_949310.1 39937034 2692341 complement(4491254..4491703) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; class II cytochrome c 4491703 2692341 RPA3973 Rhodopseudomonas palustris CGA009 class II cytochrome c NP_949310.1 4491254 R 258594 CDS NP_949311.1 39937035 2690882 complement(4491815..4494136) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbon-monoxide dehydrogenase 4494136 2690882 RPA3974 Rhodopseudomonas palustris CGA009 carbon-monoxide dehydrogenase NP_949311.1 4491815 R 258594 CDS NP_949312.1 39937036 2690126 complement(4494382..4494675) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4494675 2690126 RPA3975 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949312.1 4494382 R 258594 CDS NP_949313.1 39937037 2690145 4495106..4496911 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbamoyltransferase 4496911 2690145 RPA3976 Rhodopseudomonas palustris CGA009 carbamoyltransferase NP_949313.1 4495106 D 258594 CDS NP_949314.1 39937038 2691852 complement(4496912..4498441) 1 NC_005296.1 integral membrane protein MviN 4498441 2691852 RPA3977 Rhodopseudomonas palustris CGA009 integral membrane protein MviN NP_949314.1 4496912 R 258594 CDS NP_949315.1 39937039 2690149 complement(4498568..4499719) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DegT/DnrJ/EryC1/StrS aminotransferase 4499719 wpbE 2690149 wpbE Rhodopseudomonas palustris CGA009 DegT/DnrJ/EryC1/StrS aminotransferase NP_949315.1 4498568 R 258594 CDS NP_949316.1 39937040 2690146 complement(4499777..4500772) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NADH-dependent dehydrogenase 4500772 2690146 RPA3979 Rhodopseudomonas palustris CGA009 NADH-dependent dehydrogenase NP_949316.1 4499777 R 258594 CDS NP_949317.1 39937041 2690157 complement(4500913..4501959) 1 NC_005296.1 nucleotide sugar epimerase 4501959 wbnF 2690157 wbnF Rhodopseudomonas palustris CGA009 nucleotide sugar epimerase NP_949317.1 4500913 R 258594 CDS NP_949318.1 39937042 2689138 4502087..4503046 1 NC_005296.1 hypothetical protein 4503046 2689138 RPA3981 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949318.1 4502087 D 258594 CDS NP_949319.1 39937043 2690166 4503101..4504111 1 NC_005296.1 glycosyl transferase family protein 4504111 2690166 RPA3982 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_949319.1 4503101 D 258594 CDS NP_949320.1 39937044 2690171 complement(4504132..4506153) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; polysaccharide biosynthesis protein CapD 4506153 2690171 RPA3983 Rhodopseudomonas palustris CGA009 polysaccharide biosynthesis protein CapD NP_949320.1 4504132 R 258594 CDS NP_949321.1 39937045 2692340 complement(4506092..4507564) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ADP-heptose synthase 4507564 rfaE 2692340 rfaE Rhodopseudomonas palustris CGA009 ADP-heptose synthase NP_949321.1 4506092 R 258594 CDS NP_949322.1 39937046 2690168 complement(4507589..4508569) 1 NC_005296.1 ADP-L-glycero-D-manno-heptose-6-epimerase 4508569 2690168 RPA3985 Rhodopseudomonas palustris CGA009 ADP-L-glycero-D-manno-heptose-6-epimerase NP_949322.1 4507589 R 258594 CDS NP_949323.1 39937047 2690173 4508639..4509829 1 NC_005296.1 lipopolysaccharide heptosyltransferase II 4509829 2690173 RPA3986 Rhodopseudomonas palustris CGA009 lipopolysaccharide heptosyltransferase II NP_949323.1 4508639 D 258594 CDS NP_949324.1 39937048 2690193 4509900..4510487 1 NC_005296.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 4510487 lpcA 2690193 lpcA Rhodopseudomonas palustris CGA009 phosphoheptose isomerase NP_949324.1 4509900 D 258594 CDS NP_949325.1 39937049 2692359 4510484..4511026 1 NC_005296.1 phosphatase 4511026 2692359 RPA3988 Rhodopseudomonas palustris CGA009 phosphatase NP_949325.1 4510484 D 258594 CDS NP_949326.1 39937050 2692356 complement(4511023..4511967) 1 NC_005296.1 lipopolysaccharide heptosyltransferase I 4511967 2692356 RPA3989 Rhodopseudomonas palustris CGA009 lipopolysaccharide heptosyltransferase I NP_949326.1 4511023 R 258594 CDS NP_949327.1 39937051 2690195 4512150..4513163 1 NC_005296.1 UDP-glucose 4-epimerase 4513163 galE1 2690195 galE1 Rhodopseudomonas palustris CGA009 UDP-glucose 4-epimerase NP_949327.1 4512150 D 258594 CDS NP_949328.1 39937052 2692533 4513285..4515087 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter ATP-binding protein 4515087 2692533 RPA3991 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949328.1 4513285 D 258594 CDS NP_949329.1 39937053 2692363 4515148..4515849 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; fumarylacetoacetate (FAA) hydrolase 4515849 2692363 RPA3992 Rhodopseudomonas palustris CGA009 fumarylacetoacetate (FAA) hydrolase NP_949329.1 4515148 D 258594 CDS NP_949330.1 39937054 2689907 complement(4516059..4516916) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4516916 2689907 RPA3993 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949330.1 4516059 R 258594 CDS NP_949331.1 39937055 2692366 complement(4517032..4518180) 1 NC_005296.1 diguanylate cyclase 4518180 2692366 RPA3994 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_949331.1 4517032 R 258594 CDS NP_949332.1 39937056 2690213 4518385..4518843 1 NC_005296.1 hypothetical protein 4518843 2690213 RPA3995 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949332.1 4518385 D 258594 CDS NP_949333.1 39937057 2689881 complement(4518883..4519596) 1 NC_005296.1 Crp/Fnr family transcriptional regulator 4519596 2689881 RPA3996 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_949333.1 4518883 R 258594 CDS NP_949334.1 39937058 2691290 complement(4519740..4520276) 1 NC_005296.1 hypothetical protein 4520276 2691290 RPA3997 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949334.1 4519740 R 258594 CDS NP_949335.1 39937059 2688799 complement(4520279..4520512) 1 NC_005296.1 hypothetical protein 4520512 2688799 RPA3998 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949335.1 4520279 R 258594 CDS NP_949336.1 39937060 2690225 complement(4520517..4521560) 1 NC_005296.1 coenzyme PQQ synthesis protein E 4521560 2690225 RPA3999 Rhodopseudomonas palustris CGA009 coenzyme PQQ synthesis protein E NP_949336.1 4520517 R 258594 CDS NP_949337.1 39937061 2690219 4521683..4525000 1 NC_005296.1 guanylate cyclase 4525000 2690219 RPA4000 Rhodopseudomonas palustris CGA009 guanylate cyclase NP_949337.1 4521683 D 258594 CDS NP_949338.1 39937062 2690235 4525204..4527288 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DEAD-box protein ATP-independent RNA helicase 4527288 2690235 RPA4001 Rhodopseudomonas palustris CGA009 DEAD-box protein ATP-independent RNA helicase NP_949338.1 4525204 D 258594 CDS NP_949339.1 39937063 2692370 complement(4527500..4528882) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 4528882 2692370 RPA4002 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_949339.1 4527500 R 258594 CDS NP_949340.1 39937064 2692373 4529421..4529558 1 NC_005296.1 hypothetical protein 4529558 2692373 RPA4003 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949340.1 4529421 D 258594 CDS NP_949341.1 39937065 2690232 4530050..4530211 1 NC_005296.1 hypothetical protein 4530211 2690232 RPA4004 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949341.1 4530050 D 258594 CDS NP_949342.1 39937066 2690246 4530839..4531315 1 NC_005296.1 hypothetical protein 4531315 2690246 RPA4006 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949342.1 4530839 D 258594 CDS NP_949343.1 39937067 2690978 4531480..4531812 1 NC_005296.1 hypothetical protein 4531812 2690978 RPA4007 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949343.1 4531480 D 258594 CDS NP_949344.1 39937068 2692515 4532011..4532274 1 NC_005296.1 hypothetical protein 4532274 2692515 RPA4008 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949344.1 4532011 D 258594 CDS NP_949345.1 39937069 2690247 4532346..4534394 1 NC_005296.1 signal transduction histidine kinase 4534394 2690247 RPA4009 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_949345.1 4532346 D 258594 CDS NP_949346.1 39937070 2690252 4534391..4534768 1 NC_005296.1 chemotaxis protein CheY 4534768 2690252 RPA4010 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_949346.1 4534391 D 258594 CDS NP_949347.1 39937071 2690256 4535113..4537245 1 NC_005296.1 serine protease/outer membrane autotransporter 4537245 2690256 RPA4011 Rhodopseudomonas palustris CGA009 serine protease/outer membrane autotransporter NP_949347.1 4535113 D 258594 CDS NP_949348.1 39937072 2691807 4537981..4538667 1 NC_005296.1 hypothetical protein 4538667 2691807 RPA4012 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949348.1 4537981 D 258594 CDS NP_949349.1 39937073 2690980 complement(4538856..4540454) 1 NC_005296.1 ABC transporter ATP-binding protein 4540454 2690980 RPA4013 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949349.1 4538856 R 258594 CDS NP_949350.1 39937074 2690257 4540989..4543007 1 NC_005296.1 hypothetical protein 4543007 2690257 RPA4014 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949350.1 4540989 D 258594 CDS NP_949351.1 39937075 2690275 complement(4543091..4544500) 1 NC_005296.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 4544500 ahcY 2690275 ahcY Rhodopseudomonas palustris CGA009 S-adenosyl-L-homocysteine hydrolase NP_949351.1 4543091 R 258594 CDS NP_949352.1 39937076 2690993 complement(4544761..4545957) 1 NC_005296.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 4545957 metK 2690993 metK Rhodopseudomonas palustris CGA009 S-adenosylmethionine synthetase NP_949352.1 4544761 R 258594 CDS NP_949353.1 39937077 2690990 complement(4546021..4547427) 1 NC_005296.1 hypothetical protein 4547427 2690990 RPA4017 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949353.1 4546021 R 258594 CDS NP_949354.1 39937078 2692636 4547580..4548890 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; UDP-glucose 6-dehydrogenase 4548890 2692636 RPA4018 Rhodopseudomonas palustris CGA009 UDP-glucose 6-dehydrogenase NP_949354.1 4547580 D 258594 CDS NP_949355.1 39937079 2690289 4549160..4550341 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched-chain amino acid ABC transporter system substrate-binding protein 4550341 2690289 RPA4019 Rhodopseudomonas palustris CGA009 branched-chain amino acid ABC transporter system substrate-binding protein NP_949355.1 4549160 D 258594 CDS NP_949356.1 39937080 2691776 4550491..4551363 1 NC_005296.1 branched chain amino acid ABC transporter permease 4551363 2691776 RPA4020 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter permease NP_949356.1 4550491 D 258594 CDS NP_949357.1 39937081 2690291 4551364..4552311 1 NC_005296.1 branched-chain amino acid ABC transport system permease LivM 4552311 2690291 RPA4021 Rhodopseudomonas palustris CGA009 branched-chain amino acid ABC transport system permease LivM NP_949357.1 4551364 D 258594 CDS NP_949358.1 39937082 2690831 4552308..4553090 1 NC_005296.1 branched-chain amino acid ABC transporter ATP-binding protein 4553090 2690831 RPA4022 Rhodopseudomonas palustris CGA009 branched-chain amino acid ABC transporter ATP-binding protein NP_949358.1 4552308 D 258594 CDS NP_949359.1 39937083 2690832 4553083..4553787 1 NC_005296.1 branched-chain amino acid ABC transporter ATP-binding protein 4553787 2690832 RPA4023 Rhodopseudomonas palustris CGA009 branched-chain amino acid ABC transporter ATP-binding protein NP_949359.1 4553083 D 258594 CDS NP_949360.1 39937084 2690297 complement(4554023..4555144) 1 NC_005296.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 4555144 2690297 RPA4024 Rhodopseudomonas palustris CGA009 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase NP_949360.1 4554023 R 258594 CDS NP_949361.1 39937085 2690300 complement(4555160..4555876) 1 NC_005296.1 branched-chain amino acid ABC transporter ATP-binding protein 4555876 2690300 RPA4025 Rhodopseudomonas palustris CGA009 branched-chain amino acid ABC transporter ATP-binding protein NP_949361.1 4555160 R 258594 CDS NP_949362.1 39937086 2690318 complement(4555897..4556514) 1 NC_005296.1 ABC transporter ATP-binding protein 4556514 2690318 RPA4026 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949362.1 4555897 R 258594 CDS NP_949363.1 39937087 2691870 complement(4556646..4557671) 1 NC_005296.1 branched chain amino acid ABC transporter permease 4557671 2691870 RPA4027 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter permease NP_949363.1 4556646 R 258594 CDS NP_949364.1 39937088 2690316 complement(4557671..4558537) 1 NC_005296.1 ABC transporter permease 4558537 2690316 RPA4028 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_949364.1 4557671 R 258594 CDS NP_949365.1 39937089 2692620 complement(4558688..4559866) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino-acid ABC transporter substrate-binding protein 4559866 2692620 RPA4029 Rhodopseudomonas palustris CGA009 branched chain amino-acid ABC transporter substrate-binding protein NP_949365.1 4558688 R 258594 CDS NP_949366.1 39937090 2689968 4560104..4560502 1 NC_005296.1 hypothetical protein 4560502 2689968 RPA4030 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949366.1 4560104 D 258594 CDS NP_949367.1 39937091 2689728 4560558..4561145 1 NC_005296.1 hypothetical protein 4561145 2689728 RPA4031 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949367.1 4560558 D 258594 CDS NP_949368.1 39937092 2689921 complement(4561152..4562015) 1 NC_005296.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 4562015 purU 2689921 purU Rhodopseudomonas palustris CGA009 formyltetrahydrofolate deformylase NP_949368.1 4561152 R 258594 CDS NP_949369.1 39937093 2691878 4562147..4562992 1 NC_005296.1 uroporphyrinogen III synthase HEM4 4562992 hemD 2691878 hemD Rhodopseudomonas palustris CGA009 uroporphyrinogen III synthase HEM4 NP_949369.1 4562147 D 258594 CDS NP_949370.1 39937094 2691796 4563239..4564471 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter periplasmic branched chain amino acid binding protein 4564471 2691796 RPA4034 Rhodopseudomonas palustris CGA009 ABC transporter periplasmic branched chain amino acid binding protein NP_949370.1 4563239 D 258594 CDS NP_949371.1 39937095 2689730 4564600..4565547 1 NC_005296.1 inner-membrane translocator 4565547 2689730 RPA4035 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949371.1 4564600 D 258594 CDS NP_949372.1 39937096 2689920 4565544..4566845 1 NC_005296.1 inner-membrane translocator 4566845 2689920 RPA4036 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949372.1 4565544 D 258594 CDS NP_949373.1 39937097 2691879 4566842..4567591 1 NC_005296.1 ABC transporter ATP-binding protein 4567591 2691879 RPA4037 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949373.1 4566842 D 258594 CDS NP_949374.1 39937098 2690685 4567591..4568289 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter ATP-binding protein 4568289 2690685 RPA4038 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949374.1 4567591 D 258594 CDS NP_949375.1 39937099 2689729 4568455..4569033 1 NC_005296.1 hypothetical protein 4569033 2689729 RPA4039 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949375.1 4568455 D 258594 CDS NP_949376.1 39937100 2689737 4569156..4571108 1 NC_005296.1 hypothetical protein 4571108 2689737 RPA4040 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949376.1 4569156 D 258594 CDS NP_949377.1 39937101 2691881 4571291..4572217 1 NC_005296.1 branched chain amino acid ABC transporter ATP-binding protein 4572217 2691881 RPA4041 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_949377.1 4571291 D 258594 CDS NP_949378.1 39937102 2689110 4572214..4574145 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; AMP-dependent synthetase/ligase 4574145 2689110 RPA4042 Rhodopseudomonas palustris CGA009 AMP-dependent synthetase/ligase NP_949378.1 4572214 D 258594 CDS NP_949379.1 39937103 2689899 4574213..4575151 1 NC_005296.1 inner-membrane translocator 4575151 2689899 RPA4043 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949379.1 4574213 D 258594 CDS NP_949380.1 39937104 2689786 4575257..4576330 1 NC_005296.1 inner-membrane translocator 4576330 2689786 RPA4044 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949380.1 4575257 D 258594 CDS NP_949381.1 39937105 2691888 4576388..4577668 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino-acid ABC transporter substrate-binding protein 4577668 2691888 RPA4045 Rhodopseudomonas palustris CGA009 branched chain amino-acid ABC transporter substrate-binding protein NP_949381.1 4576388 D 258594 CDS NP_949382.1 39937106 2689884 4577938..4578780 1 NC_005296.1 branched chain amino acid ABC transporter ATP-binding protein 4578780 2689884 RPA4046 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_949382.1 4577938 D 258594 CDS NP_949383.1 39937107 2689683 complement(4578940..4579608) 1 NC_005296.1 haloacid dehalogenase 4579608 2689683 RPA4047 Rhodopseudomonas palustris CGA009 haloacid dehalogenase NP_949383.1 4578940 R 258594 CDS NP_949384.1 39937108 2691113 4580288..4581055 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alpha-D-glucose-1-phosphate cytidylyltransferase 4581055 rfbF 2691113 rfbF Rhodopseudomonas palustris CGA009 alpha-D-glucose-1-phosphate cytidylyltransferase NP_949384.1 4580288 D 258594 CDS NP_949385.1 39937109 2691056 4581052..4582146 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; CDP-glucose 4,6-dehydratase 4582146 rfbG 2691056 rfbG Rhodopseudomonas palustris CGA009 CDP-glucose 4,6-dehydratase NP_949385.1 4581052 D 258594 CDS NP_949386.1 39937110 2691892 4582156..4582953 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4582953 2691892 RPA4050 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949386.1 4582156 D 258594 CDS NP_949387.1 39937111 2690682 4582978..4583694 1 NC_005296.1 oxo-acyl acyl carrier protein dehydrogenase 4583694 2690682 RPA4051 Rhodopseudomonas palustris CGA009 oxo-acyl acyl carrier protein dehydrogenase NP_949387.1 4582978 D 258594 CDS NP_949388.1 39937112 2691884 4583678..4584796 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-dehydroquinate synthase 4584796 2691884 RPA4052 Rhodopseudomonas palustris CGA009 3-dehydroquinate synthase NP_949388.1 4583678 D 258594 CDS NP_949389.1 39937113 2692787 4584793..4585872 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; dtdpglucose 4,6-dehydratase 4585872 2692787 RPA4053 Rhodopseudomonas palustris CGA009 dtdpglucose 4,6-dehydratase NP_949389.1 4584793 D 258594 CDS NP_949390.1 39937114 2692788 4585865..4587670 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acetolactate synthase large subunit 4587670 2692788 RPA4054 Rhodopseudomonas palustris CGA009 acetolactate synthase large subunit NP_949390.1 4585865 D 258594 CDS NP_949391.1 39937115 2690780 4587670..4588125 1 NC_005296.1 hypothetical protein 4588125 2690780 RPA4055 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949391.1 4587670 D 258594 CDS NP_949392.1 39937116 2690777 4588115..4589041 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4589041 2690777 RPA4056 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949392.1 4588115 D 258594 CDS NP_949393.1 39937117 2692768 4589041..4589979 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; dolichol phosphate mannose synthase 4589979 2692768 RPA4057 Rhodopseudomonas palustris CGA009 dolichol phosphate mannose synthase NP_949393.1 4589041 D 258594 CDS NP_949394.1 39937118 2690787 complement(4590076..4591113) 1 NC_005296.1 glycosyl transferase family protein 4591113 2690787 RPA4058 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_949394.1 4590076 R 258594 CDS NP_949395.1 39937119 2691034 complement(4591214..4592116) 1 NC_005296.1 hypothetical protein 4592116 2691034 RPA4059 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949395.1 4591214 R 258594 CDS NP_949396.1 39937120 2691049 complement(4592113..4593444) 1 NC_005296.1 hypothetical protein 4593444 2691049 RPA4060 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949396.1 4592113 R 258594 CDS NP_949397.1 39937121 2692954 complement(4593550..4594539) 1 NC_005296.1 glycosyltransferase 4594539 2692954 RPA4061 Rhodopseudomonas palustris CGA009 glycosyltransferase NP_949397.1 4593550 R 258594 CDS NP_949398.1 39937122 2690322 4594774..4596105 1 NC_005296.1 hypothetical protein 4596105 2690322 RPA4062 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949398.1 4594774 D 258594 CDS NP_949399.1 39937123 2690323 4597116..4599650 1 NC_005296.1 hypothetical protein 4599650 2690323 RPA4063 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949399.1 4597116 D 258594 CDS NP_949400.1 39937124 2690328 complement(4599852..4602869) 1 NC_005296.1 hypothetical protein 4602869 2690328 RPA4064 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949400.1 4599852 R 258594 CDS NP_949401.1 39937125 2689743 4602985..4605462 1 NC_005296.1 hypothetical protein 4605462 2689743 RPA4065 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949401.1 4602985 D 258594 CDS NP_949402.1 39937126 2690837 4605912..4605989 1 NC_005296.1 hypothetical protein 4605989 2690837 RPA4066 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949402.1 4605912 D 258594 CDS NP_949403.1 39937127 2692968 4606147..4606470 1 NC_005296.1 hypothetical protein 4606470 2692968 RPA4067 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949403.1 4606147 D 258594 CDS NP_949404.1 39937128 2688739 complement(4606504..4606749) 1 NC_005296.1 hypothetical protein 4606749 2688739 RPA4068 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949404.1 4606504 R 258594 CDS NP_949405.1 39937129 2691147 complement(4606983..4607399) 1 NC_005296.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 4607399 2691147 RPA4069 Rhodopseudomonas palustris CGA009 methionine sulfoxide reductase B NP_949405.1 4606983 R 258594 CDS NP_949406.2 161610769 2689834 complement(4607430..4608140) 1 NC_005296.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 4608140 msrA1 2689834 msrA1 Rhodopseudomonas palustris CGA009 methionine sulfoxide reductase A NP_949406.2 4607430 R 258594 CDS NP_949407.1 39937131 2691126 4608699..4612028 1 NC_005296.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 4612028 carB 2691126 carB Rhodopseudomonas palustris CGA009 carbamoyl phosphate synthase large subunit NP_949407.1 4608699 D 258594 CDS NP_949408.1 39937132 2691145 4612252..4612728 1 NC_005296.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 4612728 greA 2691145 greA Rhodopseudomonas palustris CGA009 transcription elongation factor GreA NP_949408.1 4612252 D 258594 CDS NP_949409.1 39937133 2690675 4612907..4613317 1 NC_005296.1 DoxD-like family protein 4613317 2690675 RPA4073 Rhodopseudomonas palustris CGA009 DoxD-like family protein NP_949409.1 4612907 D 258594 CDS NP_949410.1 39937134 2691136 complement(4613354..4613836) 1 NC_005296.1 leucine responsive transcriptional regulator LRP/BkdR 4613836 2691136 RPA4074 Rhodopseudomonas palustris CGA009 leucine responsive transcriptional regulator LRP/BkdR NP_949410.1 4613354 R 258594 CDS NP_949411.1 39937135 2691138 4614093..4615058 1 NC_005296.1 thioredoxin reductase 4615058 trxB 2691138 trxB Rhodopseudomonas palustris CGA009 thioredoxin reductase NP_949411.1 4614093 D 258594 CDS NP_949412.1 39937136 2690625 4615067..4615990 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; LysR family transcriptional regulator 4615990 2690625 RPA4076 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_949412.1 4615067 D 258594 CDS NP_949413.1 39937137 2691180 complement(4616307..4616981) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cobyrinic acid a,c-diamide synthase 4616981 2691180 RPA4077 Rhodopseudomonas palustris CGA009 cobyrinic acid a,c-diamide synthase NP_949413.1 4616307 R 258594 CDS NP_949414.1 39937138 2692798 complement(4617193..4617570) 1 NC_005296.1 hypothetical protein 4617570 2692798 RPA4078 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949414.1 4617193 R 258594 CDS NP_949415.1 39937139 2692974 complement(4617664..4617999) 1 NC_005296.1 hypothetical protein 4617999 2692974 RPA4079 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949415.1 4617664 R 258594 CDS NP_949416.1 39937140 2692794 complement(4618141..4618422) 1 NC_005296.1 hypothetical protein 4618422 2692794 RPA4080 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949416.1 4618141 R 258594 CDS NP_949417.1 39937141 2692795 complement(4618593..4619405) 1 NC_005296.1 Flp pilus assembly CpaB 4619405 2692795 RPA4081 Rhodopseudomonas palustris CGA009 Flp pilus assembly CpaB NP_949417.1 4618593 R 258594 CDS NP_949418.1 39937142 2689931 4619836..4621062 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phage-like integrase 4621062 2689931 RPA4082 Rhodopseudomonas palustris CGA009 phage-like integrase NP_949418.1 4619836 D 258594 CDS NP_949419.1 39937143 2692811 4621775..4622530 1 NC_005296.1 hypothetical protein 4622530 2692811 RPA4083 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949419.1 4621775 D 258594 CDS NP_949420.1 39937144 2692771 4622490..4624481 1 NC_005296.1 ATPase AAA 4624481 2692771 RPA4084 Rhodopseudomonas palustris CGA009 ATPase AAA NP_949420.1 4622490 D 258594 CDS NP_949421.1 39937145 2692828 4624551..4625177 1 NC_005296.1 TetR family transcriptional regulator 4625177 2692828 RPA4085 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949421.1 4624551 D 258594 CDS NP_949422.1 39937146 2689073 complement(4625458..4626570) 1 NC_005296.1 ABC transporter permease 4626570 2689073 RPA4086 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_949422.1 4625458 R 258594 CDS NP_949423.1 39937147 2690786 complement(4626573..4629368) 1 NC_005296.1 ABC-2 type transport system permease and double ATP-binding protein fusion 4629368 2690786 RPA4087 Rhodopseudomonas palustris CGA009 ABC-2 type transport system permease and double ATP-binding protein fusion NP_949423.1 4626573 R 258594 CDS NP_949424.1 39937148 2690798 complement(4629365..4630441) 1 NC_005296.1 HlyD family secretion protein 4630441 2690798 RPA4088 Rhodopseudomonas palustris CGA009 HlyD family secretion protein NP_949424.1 4629365 R 258594 CDS NP_949425.1 39937149 2690805 complement(4630485..4631675) 1 NC_005296.1 patatin-like phospholipase domain-containing protein 4631675 2690805 RPA4089 Rhodopseudomonas palustris CGA009 patatin-like phospholipase domain-containing protein NP_949425.1 4630485 R 258594 CDS NP_949426.1 39937150 2690799 complement(4631838..4632479) 1 NC_005296.1 hypothetical protein 4632479 2690799 RPA4090 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949426.1 4631838 R 258594 CDS NP_949427.1 39937151 2690810 4632585..4633280 1 NC_005296.1 TetR family transcriptional regulator 4633280 2690810 RPA4091 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949427.1 4632585 D 258594 CDS NP_949428.1 39937152 2690809 complement(4633402..4634001) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4634001 2690809 RPA4092 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949428.1 4633402 R 258594 CDS NP_949429.1 39937153 2692829 complement(4634191..4634442) 1 NC_005296.1 hypothetical protein 4634442 2692829 RPA4093 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949429.1 4634191 R 258594 CDS NP_949430.1 39937154 2692837 complement(4634535..4635371) 1 NC_005296.1 hypothetical protein 4635371 2692837 RPA4094 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949430.1 4634535 R 258594 CDS NP_949431.1 39937155 2692842 complement(4635409..4638561) 1 NC_005296.1 multidrug-efflux transport protein mexF 4638561 2692842 RPA4095 Rhodopseudomonas palustris CGA009 multidrug-efflux transport protein mexF NP_949431.1 4635409 R 258594 CDS NP_949432.1 39937156 2689089 complement(4638566..4639741) 1 NC_005296.1 multidrug efflux membrane fusion protein mexE 4639741 2689089 RPA4096 Rhodopseudomonas palustris CGA009 multidrug efflux membrane fusion protein mexE NP_949432.1 4638566 R 258594 CDS NP_949433.1 39937157 2692759 4639835..4640461 1 NC_005296.1 TetR family transcriptional regulator 4640461 2692759 RPA4097 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949433.1 4639835 D 258594 CDS NP_949434.1 39937158 2692855 4640831..4641529 1 NC_005296.1 RNA polymerase ECF-type sigma factor 4641529 2692855 RPA4098 Rhodopseudomonas palustris CGA009 RNA polymerase ECF-type sigma factor NP_949434.1 4640831 D 258594 CDS NP_949435.1 39937159 2691123 4641574..4641816 1 NC_005296.1 hypothetical protein 4641816 2691123 RPA4099 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949435.1 4641574 D 258594 CDS NP_949436.1 39937160 2692872 4641838..4642200 1 NC_005296.1 hypothetical protein 4642200 2692872 RPA4100 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949436.1 4641838 D 258594 CDS NP_949437.1 39937161 2690338 4642335..4642760 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; organic hydroperoxide resistance protein 4642760 2690338 RPA4101 Rhodopseudomonas palustris CGA009 organic hydroperoxide resistance protein NP_949437.1 4642335 D 258594 CDS NP_949438.1 39937162 2691031 4642801..4643262 1 NC_005296.1 MarR family transcriptional regulator 4643262 2691031 RPA4102 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_949438.1 4642801 D 258594 CDS NP_949439.1 39937163 2690753 4643266..4643931 1 NC_005296.1 glutathione S-transferase 4643931 2690753 RPA4103 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_949439.1 4643266 D 258594 CDS NP_949440.1 39937164 2690354 complement(4644066..4644707) 1 NC_005296.1 hypothetical protein 4644707 2690354 RPA4104 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949440.1 4644066 R 258594 CDS NP_949441.1 39937165 2690353 4645025..4646239 1 NC_005296.1 Citation: Gonzalez-Pasayo and Martinez-Romero (2000) Mol. Plant Microbe Interact. 13:572-577; hlyD family multidrug secretion protein 4646239 rmrA 2690353 rmrA Rhodopseudomonas palustris CGA009 hlyD family multidrug secretion protein NP_949441.1 4645025 D 258594 CDS NP_949442.1 39937166 2690057 4646236..4647786 1 NC_005296.1 Citation: Gonzalez-Pasayo and Martinez-Romero (2000) Mol. Plant Microbe Interact. 13:572-577; multidrug efflux pump 4647786 rmrB 2690057 rmrB Rhodopseudomonas palustris CGA009 multidrug efflux pump NP_949442.1 4646236 D 258594 CDS NP_949443.1 39937167 2692751 4647970..4649298 1 NC_005296.1 outer membrane efflux protein OprN 4649298 oprN 2692751 oprN Rhodopseudomonas palustris CGA009 outer membrane efflux protein OprN NP_949443.1 4647970 D 258594 CDS NP_949444.1 39937168 2691832 4649318..4649986 1 NC_005296.1 TetR family transcriptional regulator 4649986 2691832 RPA4108 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949444.1 4649318 D 258594 CDS NP_949445.1 39937169 2690370 4650058..4650372 1 NC_005296.1 hypothetical protein 4650372 2690370 RPA4109 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949445.1 4650058 D 258594 CDS NP_949446.1 39937170 2691913 4650930..4652696 1 NC_005296.1 in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; hypothetical protein 4652696 mycA 2691913 mycA Rhodopseudomonas palustris CGA009 hypothetical protein NP_949446.1 4650930 D 258594 CDS NP_949447.1 39937171 2690389 4652962..4653267 1 NC_005296.1 hypothetical protein 4653267 2690389 RPA4111 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949447.1 4652962 D 258594 CDS NP_949448.1 39937172 2692730 4654732..4655625 1 NC_005296.1 diguanylate cyclase 4655625 2692730 RPA4112 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_949448.1 4654732 D 258594 CDS NP_949449.1 39937173 2689092 4656317..4657198 1 NC_005296.1 conjugal transfer protein trbB 4657198 2689092 RPA4113 Rhodopseudomonas palustris CGA009 conjugal transfer protein trbB NP_949449.1 4656317 D 258594 CDS NP_949450.1 39937174 2690387 4657318..4658322 1 NC_005296.1 LysR family transcriptional regulator 4658322 2690387 RPA4114 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_949450.1 4657318 D 258594 CDS NP_949451.1 39937175 2690386 complement(4658541..4659776) 1 NC_005296.1 conjugal transfer protein trbI 4659776 trbI2 2690386 trbI2 Rhodopseudomonas palustris CGA009 conjugal transfer protein trbI NP_949451.1 4658541 R 258594 CDS NP_949452.1 39937176 2689038 complement(4659776..4660816) 1 NC_005296.1 conjugal transfer protein TrbG 4660816 trbG2 2689038 trbG2 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbG NP_949452.1 4659776 R 258594 CDS NP_949453.1 39937177 2692728 complement(4660813..4661496) 1 NC_005296.1 conjugal transfer protein TrbF 4661496 trbF2 2692728 trbF2 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbF NP_949453.1 4660813 R 258594 CDS NP_949454.1 39937178 2690398 complement(4661500..4662795) 1 NC_005296.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 4662795 2690398 RPA4118 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbL NP_949454.1 4661500 R 258594 CDS NP_949455.1 39937179 2692888 complement(4662799..4663185) 1 NC_005296.1 TrbK 4663185 2692888 RPA4119 Rhodopseudomonas palustris CGA009 TrbK NP_949455.1 4662799 R 258594 CDS NP_949456.1 39937180 2689010 complement(4663182..4663919) 1 NC_005296.1 conjugal transfer protein TrbJ 4663919 2689010 RPA4120 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbJ NP_949456.1 4663182 R 258594 CDS NP_949457.1 39937181 2692903 complement(4663916..4666357) 1 NC_005296.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 4666357 trbE2 2692903 trbE2 Rhodopseudomonas palustris CGA009 conjugal transfer ATPase TrbE NP_949457.1 4663916 R 258594 CDS NP_949458.1 39937182 2692897 complement(4666367..4666630) 1 NC_005296.1 conjugal transfer protein TrbD 4666630 2692897 RPA4122 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbD NP_949458.1 4666367 R 258594 CDS NP_949459.1 39937183 2691683 complement(4666630..4666974) 1 NC_005296.1 conjugal transfer protein TrbC 4666974 trbC2 2691683 trbC2 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbC NP_949459.1 4666630 R 258594 CDS NP_949460.1 39937184 2692913 complement(4666971..4667939) 1 NC_005296.1 conjugal transfer protein TrbB 4667939 trbB2 2692913 trbB2 Rhodopseudomonas palustris CGA009 conjugal transfer protein TrbB NP_949460.1 4666971 R 258594 CDS NP_949461.1 39937185 2692910 complement(4668297..4668737) 1 NC_005296.1 hypothetical protein 4668737 2692910 RPA4125 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949461.1 4668297 R 258594 CDS NP_949462.1 39937186 2692145 complement(4668694..4669896) 1 NC_005296.1 hypothetical protein 4669896 2692145 RPA4126 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949462.1 4668694 R 258594 CDS NP_949463.1 39937187 2689027 complement(4669871..4670587) 1 NC_005296.1 hypothetical protein 4670587 2689027 RPA4127 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949463.1 4669871 R 258594 CDS NP_949464.1 39937188 2691262 complement(4670603..4670845) 1 NC_005296.1 hypothetical protein 4670845 2691262 RPA4128 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949464.1 4670603 R 258594 CDS NP_949465.1 39937189 2688808 4670965..4671315 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; XRE family transcriptional regulator 4671315 2688808 RPA4129 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_949465.1 4670965 D 258594 CDS NP_949466.1 39937190 2689029 4671312..4672205 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4672205 2689029 RPA4130 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949466.1 4671312 D 258594 CDS NP_949467.1 39937191 2692150 complement(4672420..4672884) 1 NC_005296.1 CopG family transcriptional regulator 4672884 2692150 RPA4131 Rhodopseudomonas palustris CGA009 CopG family transcriptional regulator NP_949467.1 4672420 R 258594 CDS NP_949468.1 39937192 2693011 complement(4672894..4674888) 1 NC_005296.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 4674888 traG1 2693011 traG1 Rhodopseudomonas palustris CGA009 conjugal transfer coupling protein TraG NP_949468.1 4672894 R 258594 CDS NP_949469.1 39937193 2688843 complement(4675022..4675321) 1 NC_005296.1 hypothetical protein 4675321 2688843 RPA4133 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949469.1 4675022 R 258594 CDS NP_949470.1 39937194 2692158 4675429..4675707 1 NC_005296.1 XRE family transcriptional regulator 4675707 2692158 RPA4134 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_949470.1 4675429 D 258594 CDS NP_949471.1 39937195 2691961 complement(4675844..4676341) 1 NC_005296.1 N-acetyltransferase GCN5 4676341 2691961 RPA4135 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_949471.1 4675844 R 258594 CDS NP_949472.1 39937196 2692168 4676616..4678526 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; DNA topoisomerase 4678526 2692168 RPA4136 Rhodopseudomonas palustris CGA009 DNA topoisomerase NP_949472.1 4676616 D 258594 CDS NP_949473.1 39937197 2691121 complement(4679131..4679562) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4679562 2691121 RPA4137 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949473.1 4679131 R 258594 CDS NP_949474.1 39937198 2691574 complement(4679786..4680169) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phasin 2 4680169 2691574 RPA4138 Rhodopseudomonas palustris CGA009 phasin 2 NP_949474.1 4679786 R 258594 CDS NP_949475.1 39937199 2691955 complement(4680511..4681149) 1 NC_005296.1 hypothetical protein 4681149 2691955 RPA4139 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949475.1 4680511 R 258594 CDS NP_949476.1 39937200 2691326 4683029..4684075 1 NC_005296.1 sensor histidine kinase 4684075 2691326 RPA4140 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_949476.1 4683029 D 258594 CDS NP_949477.1 39937201 2689024 4684624..4684875 1 NC_005296.1 hypothetical protein 4684875 2689024 RPA4141 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949477.1 4684624 D 258594 CDS NP_949478.1 39937202 2689020 4684872..4685276 1 NC_005296.1 twitching motility protein PilT 4685276 2689020 RPA4142 Rhodopseudomonas palustris CGA009 twitching motility protein PilT NP_949478.1 4684872 D 258594 CDS NP_949479.1 39937203 2691950 4685360..4686070 1 NC_005296.1 nitric oxide responsive transcriptional regulator NnrR 4686070 nnrR 2691950 nnrR Rhodopseudomonas palustris CGA009 nitric oxide responsive transcriptional regulator NnrR NP_949479.1 4685360 D 258594 CDS NP_949480.1 39937204 2692604 complement(4686043..4686267) 1 NC_005296.1 hypothetical protein 4686267 2692604 RPA4144 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949480.1 4686043 R 258594 CDS NP_949481.1 39937205 2690405 4686505..4687617 1 NC_005296.1 dissimilatory nitrite reductase 4687617 nirK2 2690405 nirK2 Rhodopseudomonas palustris CGA009 dissimilatory nitrite reductase NP_949481.1 4686505 D 258594 CDS NP_949482.1 39937206 2690421 4687786..4688667 1 NC_005296.1 hypothetical protein 4688667 2690421 RPA4146 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949482.1 4687786 D 258594 CDS NP_949483.1 39937207 2690431 4688895..4690361 1 NC_005296.1 catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 4690361 2690431 RPA4147 Rhodopseudomonas palustris CGA009 thymidine phosphorylase NP_949483.1 4688895 D 258594 CDS NP_949484.1 39937208 2690428 4690358..4691269 1 NC_005296.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 4691269 prsA 2690428 prsA Rhodopseudomonas palustris CGA009 phosphoribosylpyrophosphate synthetase NP_949484.1 4690358 D 258594 CDS NP_949485.1 39937209 2690439 4691266..4692894 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-lactamase-like protein 4692894 2690439 RPA4149 Rhodopseudomonas palustris CGA009 beta-lactamase-like protein NP_949485.1 4691266 D 258594 CDS NP_949486.1 39937210 2690420 complement(4693308..4693706) 1 NC_005296.1 hypothetical protein 4693706 2690420 RPA4150 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949486.1 4693308 R 258594 CDS NP_949487.1 39937211 2692172 4693809..4694681 1 NC_005296.1 LysR family transcriptional regulator 4694681 2692172 RPA4151 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_949487.1 4693809 D 258594 CDS NP_949488.1 39937212 2692171 4694801..4695811 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; family 1 extracellular solute-binding protein 4695811 fbpA 2692171 fbpA Rhodopseudomonas palustris CGA009 family 1 extracellular solute-binding protein NP_949488.1 4694801 D 258594 CDS NP_949489.1 39937213 2691834 4695889..4697601 1 NC_005296.1 binding-protein-dependent transport system inner membrane protein 4697601 fpbB 2691834 fpbB Rhodopseudomonas palustris CGA009 binding-protein-dependent transport system inner membrane protein NP_949489.1 4695889 D 258594 CDS NP_949490.1 39937214 2689006 4697718..4698356 1 NC_005296.1 hypothetical protein 4698356 2689006 RPA4154 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949490.1 4697718 D 258594 CDS NP_949491.1 39937215 2692707 complement(4698521..4699171) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-oxoacid CoA-transferase subunit B 4699171 2692707 RPA4155 Rhodopseudomonas palustris CGA009 3-oxoacid CoA-transferase subunit B NP_949491.1 4698521 R 258594 CDS NP_949492.1 39937216 2691840 complement(4699183..4699899) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-oxoacid CoA-transferase subunit A 4699899 2691840 RPA4156 Rhodopseudomonas palustris CGA009 3-oxoacid CoA-transferase subunit A NP_949492.1 4699183 R 258594 CDS NP_949493.1 39937217 2691842 4700050..4702053 1 NC_005296.1 hypothetical protein 4702053 2691842 RPA4157 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949493.1 4700050 D 258594 CDS NP_949494.1 39937218 2689091 complement(4702211..4703011) 1 NC_005296.1 binding-protein-dependent transport systems inner membrane component 4703011 potI 2689091 potI Rhodopseudomonas palustris CGA009 binding-protein-dependent transport systems inner membrane component NP_949494.1 4702211 R 258594 CDS NP_949495.1 39937219 2692182 complement(4703319..4704233) 1 NC_005296.1 binding-protein-dependent transport systems inner membrane component 4704233 potH 2692182 potH Rhodopseudomonas palustris CGA009 binding-protein-dependent transport systems inner membrane component NP_949495.1 4703319 R 258594 CDS NP_949496.1 39937220 2692186 complement(4704230..4705372) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; spermidine/putrescine ABC transporter ATP-binding subunit 4705372 2692186 RPA4160 Rhodopseudomonas palustris CGA009 spermidine/putrescine ABC transporter ATP-binding subunit NP_949496.1 4704230 R 258594 CDS NP_949497.1 39937221 2692180 complement(4705473..4706279) 1 NC_005296.1 hypothetical protein 4706279 2692180 RPA4161 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949497.1 4705473 R 258594 CDS NP_949498.1 39937222 2689012 4706510..4707343 1 NC_005296.1 taurine ABC transporter permease 4707343 2689012 RPA4162 Rhodopseudomonas palustris CGA009 taurine ABC transporter permease NP_949498.1 4706510 D 258594 CDS NP_949499.1 39937223 2690814 4707355..4708209 1 NC_005296.1 taurine transport system ATP-binding protein 4708209 2690814 RPA4163 Rhodopseudomonas palustris CGA009 taurine transport system ATP-binding protein NP_949499.1 4707355 D 258594 CDS NP_949500.1 39937224 2690822 4708273..4709268 1 NC_005296.1 aliphatic sulfonate ABC transporter substrate-binding protein 4709268 2690822 RPA4164 Rhodopseudomonas palustris CGA009 aliphatic sulfonate ABC transporter substrate-binding protein NP_949500.1 4708273 D 258594 CDS NP_949501.1 39937225 2692205 4709325..4710020 1 NC_005296.1 hypothetical protein 4710020 2692205 RPA4165 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949501.1 4709325 D 258594 CDS NP_949502.1 39937226 2691281 4710032..4710985 1 NC_005296.1 nitrilase 4710985 2691281 RPA4166 Rhodopseudomonas palustris CGA009 nitrilase NP_949502.1 4710032 D 258594 CDS NP_949503.1 39937227 2691022 complement(4711028..4713766) 1 NC_005296.1 diguanylate cyclase/phosphodiesterase 4713766 2691022 RPA4167 Rhodopseudomonas palustris CGA009 diguanylate cyclase/phosphodiesterase NP_949503.1 4711028 R 258594 CDS NP_949504.1 39937228 2692210 4713876..4714976 1 NC_005296.1 FAD dependent oxidoreductase 4714976 2692210 RPA4168 Rhodopseudomonas palustris CGA009 FAD dependent oxidoreductase NP_949504.1 4713876 D 258594 CDS NP_949505.1 39937229 2690923 4715067..4715798 1 NC_005296.1 GntR family transcriptional regulator 4715798 2690923 RPA4169 Rhodopseudomonas palustris CGA009 GntR family transcriptional regulator NP_949505.1 4715067 D 258594 CDS NP_949506.1 39937230 2691943 4716074..4717276 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino-acid ABC transporter substrate-binding protein 4717276 2691943 RPA4170 Rhodopseudomonas palustris CGA009 branched chain amino-acid ABC transporter substrate-binding protein NP_949506.1 4716074 D 258594 CDS NP_949507.1 39937231 2688984 complement(4717693..4718007) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4718007 2688984 RPA4171 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949507.1 4717693 R 258594 CDS NP_949508.1 39937232 2690441 complement(4718090..4718449) 1 NC_005296.1 hypothetical protein 4718449 2690441 RPA4172 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949508.1 4718090 R 258594 CDS NP_949509.1 39937233 2690434 complement(4718430..4719182) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; diguanylate cyclase 4719182 2690434 RPA4173 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_949509.1 4718430 R 258594 CDS NP_949510.1 39937234 2690444 4719311..4719799 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphoribosylaminoimidazole carboxylase catalytic subunit 4719799 purE 2690444 purE Rhodopseudomonas palustris CGA009 phosphoribosylaminoimidazole carboxylase catalytic subunit NP_949510.1 4719311 D 258594 CDS NP_949511.1 39937235 2691946 4719796..4720896 1 NC_005296.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 4720896 purK 2691946 purK Rhodopseudomonas palustris CGA009 phosphoribosylaminoimidazole carboxylase ATPase subunit NP_949511.1 4719796 D 258594 CDS NP_949512.1 39937236 2691944 4721053..4721316 1 NC_005296.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 4721316 rpsU 2691944 rpsU Rhodopseudomonas palustris CGA009 30S ribosomal protein S21 NP_949512.1 4721053 D 258594 CDS NP_949513.1 39937237 2688952 complement(4721493..4722368) 1 NC_005296.1 hypothetical protein 4722368 2688952 RPA4177 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949513.1 4721493 R 258594 CDS NP_949514.1 39937238 2690954 complement(4722518..4722805) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4722805 2690954 RPA4178 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949514.1 4722518 R 258594 CDS NP_949515.1 39937239 2688997 4723009..4723383 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4723383 2688997 RPA4179 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949515.1 4723009 D 258594 CDS NP_949516.1 39937240 2690459 complement(4723562..4724965) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NAD(P) transhydrogenase subunit beta 4724965 pntB 2690459 pntB Rhodopseudomonas palustris CGA009 NAD(P) transhydrogenase subunit beta NP_949516.1 4723562 R 258594 CDS NP_949517.1 39937241 2688795 complement(4724979..4725302) 1 NC_005296.1 nicotinamide nucleotide transhydrogenase subunit alpha2 4725302 pntA 2688795 pntA Rhodopseudomonas palustris CGA009 nicotinamide nucleotide transhydrogenase subunit alpha2 NP_949517.1 4724979 R 258594 CDS NP_949518.1 39937242 2692217 complement(4725328..4726455) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NAD(P)(+) transhydrogenase 4726455 pntA 2692217 pntA Rhodopseudomonas palustris CGA009 NAD(P)(+) transhydrogenase NP_949518.1 4725328 R 258594 CDS NP_949519.1 39937243 2692225 complement(4726655..4726807) 1 NC_005296.1 hypothetical protein 4726807 2692225 RPA4183 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949519.1 4726655 R 258594 CDS NP_949520.1 39937244 2691707 4727027..4727329 1 NC_005296.1 hypothetical protein 4727329 2691707 RPA4184 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949520.1 4727027 D 258594 CDS NP_949521.1 39937245 2690917 complement(4727285..4729201) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peptidase M3B oligoendopeptidase-like clade 3 4729201 2690917 RPA4185 Rhodopseudomonas palustris CGA009 peptidase M3B oligoendopeptidase-like clade 3 NP_949521.1 4727285 R 258594 CDS NP_949522.1 39937246 2688929 4729537..4730202 1 NC_005296.1 TerC family integral membrane protein 4730202 2688929 RPA4186 Rhodopseudomonas palustris CGA009 TerC family integral membrane protein NP_949522.1 4729537 D 258594 CDS NP_949523.1 39937247 2690466 4730298..4731785 1 NC_005296.1 Fis family transcriptional regulator 4731785 2690466 RPA4187 Rhodopseudomonas palustris CGA009 Fis family transcriptional regulator NP_949523.1 4730298 D 258594 CDS NP_949524.1 39937248 2690472 4732135..4734309 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4734309 2690472 RPA4188 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949524.1 4732135 D 258594 CDS NP_949525.1 39937249 2692687 4734594..4736255 1 NC_005296.1 hypothetical protein 4736255 2692687 RPA4189 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949525.1 4734594 D 258594 CDS NP_949526.1 39937250 2690491 complement(4736383..4736772) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4736772 2690491 RPA4190 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949526.1 4736383 R 258594 CDS NP_949527.1 39937251 2690490 complement(4736843..4737142) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4737142 2690490 RPA4191 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949527.1 4736843 R 258594 CDS NP_949528.1 39937252 2690488 4737334..4737918 1 NC_005296.1 hypothetical protein 4737918 2690488 RPA4192 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949528.1 4737334 D 258594 CDS NP_949529.1 39937253 2692385 4737915..4739348 1 NC_005296.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 4739348 pyk 2692385 pyk Rhodopseudomonas palustris CGA009 pyruvate kinase NP_949529.1 4737915 D 258594 CDS NP_949530.1 39937254 2691827 complement(4739575..4740003) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; OsmC-like protein 4740003 osmC 2691827 osmC Rhodopseudomonas palustris CGA009 OsmC-like protein NP_949530.1 4739575 R 258594 CDS NP_949531.1 39937255 2688866 complement(4740000..4741004) 1 NC_005296.1 alpha/beta hydrolase fold protein 4741004 2688866 RPA4195 Rhodopseudomonas palustris CGA009 alpha/beta hydrolase fold protein NP_949531.1 4740000 R 258594 CDS NP_949532.1 39937256 2692248 complement(4741075..4741737) 1 NC_005296.1 TPR repeat-containing protein 4741737 2692248 RPA4196 Rhodopseudomonas palustris CGA009 TPR repeat-containing protein NP_949532.1 4741075 R 258594 CDS NP_949533.1 39937257 2692676 complement(4741835..4741960) 1 NC_005296.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 4741960 rpmJ 2692676 rpmJ Rhodopseudomonas palustris CGA009 50S ribosomal protein L36 NP_949533.1 4741835 R 258594 CDS NP_949534.1 39937258 2690751 4742272..4743141 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; amidohydrolase 4743141 2690751 RPA4198 Rhodopseudomonas palustris CGA009 amidohydrolase NP_949534.1 4742272 D 258594 CDS NP_949535.1 39937259 2693009 4743290..4744027 1 NC_005296.1 2-haloacid halidohydrolase IVA 4744027 2693009 RPA4199 Rhodopseudomonas palustris CGA009 2-haloacid halidohydrolase IVA NP_949535.1 4743290 D 258594 CDS NP_949536.1 39937260 2692933 4744104..4744586 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; prolyl-tRNA synthetase 4744586 2692933 RPA4200 Rhodopseudomonas palustris CGA009 prolyl-tRNA synthetase NP_949536.1 4744104 D 258594 CDS NP_949537.1 39937261 2692384 complement(4744660..4744950) 1 NC_005296.1 hypothetical protein 4744950 2692384 RPA4201 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949537.1 4744660 R 258594 CDS NP_949538.1 39937262 2691709 complement(4745124..4746449) 1 NC_005296.1 methyl-accepting chemotaxis sensory transducer 4746449 2691709 RPA4202 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949538.1 4745124 R 258594 CDS NP_949539.1 39937263 2691258 complement(4746424..4746945) 1 NC_005296.1 methyl-accepting chemotaxis sensory transducer 4746945 2691258 RPA4203 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949539.1 4746424 R 258594 CDS NP_949540.1 39937264 2692663 complement(4747181..4747441) 1 NC_005296.1 hypothetical protein 4747441 2692663 RPA4204 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949540.1 4747181 R 258594 CDS NP_949541.1 39937265 2692943 4747662..4749023 1 NC_005296.1 PST family polysaccharide export protein 4749023 2692943 RPA4205 Rhodopseudomonas palustris CGA009 PST family polysaccharide export protein NP_949541.1 4747662 D 258594 CDS NP_949542.1 39937266 2688974 complement(4749468..4750256) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-hydroxybutyrate dehydrogenase 4750256 2688974 RPA4206 Rhodopseudomonas palustris CGA009 3-hydroxybutyrate dehydrogenase NP_949542.1 4749468 R 258594 CDS NP_949543.1 39937267 2692638 complement(4750305..4751444) 1 NC_005296.1 patatin-like phospholipase domain-containing protein 4751444 2692638 RPA4207 Rhodopseudomonas palustris CGA009 patatin-like phospholipase domain-containing protein NP_949543.1 4750305 R 258594 CDS NP_949544.1 39937268 2690504 complement(4751539..4752054) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; allergen V5/Tpx-1-like protein 4752054 2690504 RPA4208 Rhodopseudomonas palustris CGA009 allergen V5/Tpx-1-like protein NP_949544.1 4751539 R 258594 CDS NP_949545.1 39937269 2690501 complement(4752301..4753338) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutamine synthetase 4753338 glnA 2690501 glnA Rhodopseudomonas palustris CGA009 glutamine synthetase NP_949545.1 4752301 R 258594 CDS NP_949546.1 39937270 2689888 4753765..4754016 1 NC_005296.1 hypothetical protein 4754016 2689888 RPA4210 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949546.1 4753765 D 258594 CDS NP_949547.1 39937271 2688869 complement(4754118..4755053) 1 NC_005296.1 catalyzes the formation of glutamate from glutamine; glutaminase 4755053 glsA 2688869 glsA Rhodopseudomonas palustris CGA009 glutaminase NP_949547.1 4754118 R 258594 CDS NP_949548.1 39937272 2692947 complement(4755200..4755709) 1 NC_005296.1 hypothetical protein 4755709 2692947 RPA4212 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949548.1 4755200 R 258594 CDS NP_949549.1 39937273 2691713 complement(4755696..4757351) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sulfite reductase hemoprotein subunit 4757351 2691713 RPA4213 Rhodopseudomonas palustris CGA009 sulfite reductase hemoprotein subunit NP_949549.1 4755696 R 258594 CDS NP_949550.1 39937274 2692936 complement(4757362..4757676) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4757676 2692936 RPA4214 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949550.1 4757362 R 258594 CDS NP_949551.1 39937275 2689887 complement(4757673..4759109) 1 NC_005296.1 uroporphyrin-III C-methyltransferase 4759109 cysG 2689887 cysG Rhodopseudomonas palustris CGA009 uroporphyrin-III C-methyltransferase NP_949551.1 4757673 R 258594 CDS NP_949552.1 39937276 2692500 4759508..4761682 1 NC_005296.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 4761682 glcB 2692500 glcB Rhodopseudomonas palustris CGA009 malate synthase G NP_949552.1 4759508 D 258594 CDS NP_949553.1 39937277 2692952 4761873..4762073 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4762073 2692952 RPA4217 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949553.1 4761873 D 258594 CDS NP_949554.1 39937278 2689835 complement(4762211..4762372) 1 NC_005296.1 hypothetical protein 4762372 2689835 RPA4218 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949554.1 4762211 R 258594 CDS NP_949555.1 39937279 2693027 complement(4762529..4763191) 1 NC_005296.1 hypothetical protein 4763191 2693027 RPA4219 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949555.1 4762529 R 258594 CDS NP_949556.1 39937280 2689948 complement(4763214..4763981) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ErfK/YbiS/YcfS/YnhG protein 4763981 2689948 RPA4220 Rhodopseudomonas palustris CGA009 ErfK/YbiS/YcfS/YnhG protein NP_949556.1 4763214 R 258594 CDS NP_949557.1 39937281 2692637 4764203..4765318 1 NC_005296.1 hypothetical protein 4765318 2692637 RPA4221 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949557.1 4764203 D 258594 CDS NP_949558.1 39937282 2690629 complement(4765452..4765847) 1 NC_005296.1 hypothetical protein 4765847 2690629 RPA4222 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949558.1 4765452 R 258594 CDS NP_949559.1 39937283 2689682 complement(4766223..4767029) 1 NC_005296.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 4767029 2689682 RPA4223 Rhodopseudomonas palustris CGA009 two-component response regulator NP_949559.1 4766223 R 258594 CDS NP_949560.1 39937284 2689795 4767160..4767444 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4767444 2689795 RPA4224 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949560.1 4767160 D 258594 CDS NP_949561.1 39937285 2692624 4767444..4767989 1 NC_005296.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 4767989 2692624 RPA4225 Rhodopseudomonas palustris CGA009 RNA polymerase sigma factor NP_949561.1 4767444 D 258594 CDS NP_949562.1 39937286 2690631 complement(4768147..4769913) 1 NC_005296.1 signal transduction histidine kinase 4769913 2690631 RPA4226 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_949562.1 4768147 R 258594 CDS NP_949563.1 39937287 2692263 complement(4770066..4770695) 1 NC_005296.1 urease accessory protein UreG 4770695 ureG 2692263 ureG Rhodopseudomonas palustris CGA009 urease accessory protein UreG NP_949563.1 4770066 R 258594 CDS NP_949564.1 39937288 2692266 4770919..4771263 1 NC_005296.1 hypothetical protein 4771263 2692266 RPA4228 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949564.1 4770919 D 258594 CDS NP_949565.1 39937289 2692276 4771282..4771632 1 NC_005296.1 hypothetical protein 4771632 2692276 RPA4229 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949565.1 4771282 D 258594 CDS NP_949566.1 39937290 2690687 4772098..4772382 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4772382 2690687 RPA4230 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949566.1 4772098 D 258594 CDS NP_949567.1 39937291 2690691 complement(4772451..4774562) 1 NC_005296.1 oxidoreductase 4774562 2690691 RPA4231 Rhodopseudomonas palustris CGA009 oxidoreductase NP_949567.1 4772451 R 258594 CDS NP_949568.1 39937292 2693037 4774697..4775023 1 NC_005296.1 hypothetical protein 4775023 2693037 RPA4232 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949568.1 4774697 D 258594 CDS NP_949569.1 39937293 2693040 complement(4775037..4776275) 1 NC_005296.1 cyclic nucleotide regulated K+ channel 4776275 2693040 RPA4233 Rhodopseudomonas palustris CGA009 cyclic nucleotide regulated K+ channel NP_949569.1 4775037 R 258594 CDS NP_949570.1 39937294 2692622 complement(4776328..4777047) 1 NC_005296.1 anaerobic aromatic degradation regulator 4777047 aadR 2692622 aadR Rhodopseudomonas palustris CGA009 anaerobic aromatic degradation regulator NP_949570.1 4776328 R 258594 CDS NP_949571.1 39937295 2689885 4777176..4777559 1 NC_005296.1 cytochrome c class I 4777559 2689885 RPA4235 Rhodopseudomonas palustris CGA009 cytochrome c class I NP_949571.1 4777176 D 258594 CDS NP_949572.1 39937296 2690524 complement(4777519..4778715) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4778715 2690524 RPA4236 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949572.1 4777519 R 258594 CDS NP_949573.1 39937297 2689961 complement(4778728..4779507) 1 NC_005296.1 ABC transporter ATP-binding protein 4779507 2689961 RPA4237 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_949573.1 4778728 R 258594 CDS NP_949574.1 39937298 2690528 complement(4779510..4780646) 1 NC_005296.1 hypothetical protein 4780646 2690528 RPA4238 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949574.1 4779510 R 258594 CDS NP_949575.1 39937299 2690521 4780758..4781219 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4781219 2690521 RPA4239 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949575.1 4780758 D 258594 CDS NP_949576.1 39937300 2689959 complement(4781248..4783971) 1 NC_005296.1 GCN5-like N-acetyltransferase 4783971 2689959 RPA4240 Rhodopseudomonas palustris CGA009 GCN5-like N-acetyltransferase NP_949576.1 4781248 R 258594 CDS NP_949577.1 39937301 2692962 complement(4784111..4784503) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4784503 2692962 RPA4241 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949577.1 4784111 R 258594 CDS NP_949578.1 39937302 2693049 4784794..4786353 1 NC_005296.1 hypothetical protein 4786353 2693049 RPA4242 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949578.1 4784794 D 258594 CDS NP_949579.1 39937303 2690669 complement(4786335..4788101) 1 NC_005296.1 poly-beta-hydroxyalkanoate synthase 4788101 phaC 2690669 phaC Rhodopseudomonas palustris CGA009 poly-beta-hydroxyalkanoate synthase NP_949579.1 4786335 R 258594 CDS NP_949580.1 39937304 2691781 complement(4788368..4789204) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4789204 2691781 RPA4244 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949580.1 4788368 R 258594 CDS NP_949581.1 39937305 2693045 4789394..4790227 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4790227 2693045 RPA4245 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949581.1 4789394 D 258594 CDS NP_949582.1 39937306 2693063 4790314..4791045 1 NC_005296.1 CBS/transport-associated domain-containing protein 4791045 2693063 RPA4246 Rhodopseudomonas palustris CGA009 CBS/transport-associated domain-containing protein NP_949582.1 4790314 D 258594 CDS NP_949583.1 39937307 2693064 4791190..4792716 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; two component low oxygen sensor histidine kinase 4792716 fixL 2693064 fixL Rhodopseudomonas palustris CGA009 two component low oxygen sensor histidine kinase NP_949583.1 4791190 D 258594 CDS NP_949584.1 39937308 2691786 4792709..4793320 1 NC_005296.1 response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; response regulator FixJ 4793320 fixJ 2691786 fixJ Rhodopseudomonas palustris CGA009 response regulator FixJ NP_949584.1 4792709 D 258594 CDS NP_949585.1 39937309 2690670 4793406..4793798 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis protein CheY 4793798 2690670 RPA4249 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_949585.1 4793406 D 258594 CDS NP_949586.1 39937310 2692271 4793997..4794689 1 NC_005296.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; transcriptional regulator FixK 4794689 fixK 2692271 fixK Rhodopseudomonas palustris CGA009 transcriptional regulator FixK NP_949586.1 4793997 D 258594 CDS NP_949587.1 39937311 2692273 4795019..4796326 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; O-acetylhomoserine/O-acetylserine sulfhydrylase 4796326 oahs 2692273 oahs Rhodopseudomonas palustris CGA009 O-acetylhomoserine/O-acetylserine sulfhydrylase NP_949587.1 4795019 D 258594 CDS NP_949588.1 39937312 2692284 complement(4796479..4797843) 1 NC_005296.1 NADH dehydrogenase (quinone) 4797843 nuoN2 2692284 nuoN2 Rhodopseudomonas palustris CGA009 NADH dehydrogenase (quinone) NP_949588.1 4796479 R 258594 CDS NP_949589.1 39937313 2690888 complement(4797854..4799296) 1 NC_005296.1 proton-translocating NADH-quinone oxidoreductase subunit M 4799296 nuoM2 2690888 nuoM2 Rhodopseudomonas palustris CGA009 proton-translocating NADH-quinone oxidoreductase subunit M NP_949589.1 4797854 R 258594 CDS NP_949590.1 39937314 2693066 complement(4799287..4801356) 1 NC_005296.1 proton-translocating NADH-quinone oxidoreductase subunit L 4801356 nuoL2 2693066 nuoL2 Rhodopseudomonas palustris CGA009 proton-translocating NADH-quinone oxidoreductase subunit L NP_949590.1 4799287 R 258594 CDS NP_949591.1 39937315 2692402 complement(4801359..4801667) 1 NC_005296.1 NADH-ubiquinone oxidoreductase subunit 4L 4801667 nuoK2 2692402 nuoK2 Rhodopseudomonas palustris CGA009 NADH-ubiquinone oxidoreductase subunit 4L NP_949591.1 4801359 R 258594 CDS NP_949592.1 39937316 2692291 complement(4801664..4802170) 1 NC_005296.1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 4802170 nuoJ2 2692291 nuoJ2 Rhodopseudomonas palustris CGA009 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 NP_949592.1 4801664 R 258594 CDS NP_949593.1 39937317 2690532 complement(4802167..4802688) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 4802688 nuoI2 2690532 nuoI2 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit I NP_949593.1 4802167 R 258594 CDS NP_949594.1 39937318 2691726 complement(4802685..4803644) 1 NC_005296.1 respiratory-chain NADH dehydrogenase subunit 1 4803644 nuoH2 2691726 nuoH2 Rhodopseudomonas palustris CGA009 respiratory-chain NADH dehydrogenase subunit 1 NP_949594.1 4802685 R 258594 CDS NP_949595.1 39937319 2691912 complement(4803641..4806274) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 4806274 nuoG2 2691912 nuoG2 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit G NP_949595.1 4803641 R 258594 CDS NP_949596.1 39937320 2691727 complement(4806271..4807557) 1 NC_005296.1 NADH dehydrogenase (quinone) 4807557 nuoF2 2691727 nuoF2 Rhodopseudomonas palustris CGA009 NADH dehydrogenase (quinone) NP_949596.1 4806271 R 258594 CDS NP_949597.1 39937321 2691731 complement(4807554..4808042) 1 NC_005296.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 4808042 nuoE2 2691731 nuoE2 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit E NP_949597.1 4807554 R 258594 CDS NP_949598.1 39937322 2693083 complement(4808039..4809784) 1 NC_005296.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 4809784 nuoCD 2693083 nuoCD Rhodopseudomonas palustris CGA009 bifunctional NADH:ubiquinone oxidoreductase subunit C/D NP_949598.1 4808039 R 258594 CDS NP_949599.1 39937323 2692614 complement(4809781..4810407) 1 NC_005296.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 4810407 nuoB2 2692614 nuoB2 Rhodopseudomonas palustris CGA009 NADH dehydrogenase subunit B NP_949599.1 4809781 R 258594 CDS NP_949600.1 39937324 2693090 complement(4810404..4810793) 1 NC_005296.1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 4810793 nuoA2 2693090 nuoA2 Rhodopseudomonas palustris CGA009 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 NP_949600.1 4810404 R 258594 CDS NP_949601.1 39937325 2692401 4811238..4813037 1 NC_005296.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABC transporter 4813037 ndvA 2692401 ndvA Rhodopseudomonas palustris CGA009 cyclic beta-1,2-glucan ABC transporter NP_949601.1 4811238 D 258594 CDS NP_949602.1 39937326 2692409 4813207..4814661 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Serine-type D-Ala-D-Ala carboxypeptidase 4814661 2692409 RPA4266 Rhodopseudomonas palustris CGA009 Serine-type D-Ala-D-Ala carboxypeptidase NP_949602.1 4813207 D 258594 CDS NP_949603.1 39937327 2691735 4814933..4816624 1 NC_005296.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 4816624 2691735 RPA4267 Rhodopseudomonas palustris CGA009 long-chain-fatty-acid--CoA ligase NP_949603.1 4814933 D 258594 CDS NP_949604.1 39937328 2691745 4816864..4817349 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; peroxiredoxin-like protein 4817349 2691745 RPA4268 Rhodopseudomonas palustris CGA009 peroxiredoxin-like protein NP_949604.1 4816864 D 258594 CDS NP_949605.1 39937329 2692299 complement(4817500..4817967) 1 NC_005296.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 4817967 rnhA 2692299 rnhA Rhodopseudomonas palustris CGA009 ribonuclease H NP_949605.1 4817500 R 258594 CDS NP_949606.1 39937330 2692412 complement(4817964..4818947) 1 NC_005296.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 4818947 thrB 2692412 thrB Rhodopseudomonas palustris CGA009 homoserine kinase NP_949606.1 4817964 R 258594 CDS NP_949607.1 39937331 2689111 complement(4819047..4820009) 1 NC_005296.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4820009 ispH 2689111 ispH Rhodopseudomonas palustris CGA009 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NP_949607.1 4819047 R 258594 CDS NP_949608.1 39937332 2692599 4820269..4820985 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4820985 2692599 RPA4272 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949608.1 4820269 D 258594 CDS NP_949609.1 39937333 2692606 complement(4821237..4821614) 1 NC_005296.1 hypothetical protein 4821614 2692606 RPA4273 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949609.1 4821237 R 258594 CDS NP_949610.1 39937334 2692308 complement(4822209..4823204) 1 NC_005296.1 hypothetical protein 4823204 2692308 RPA4274 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949610.1 4822209 R 258594 CDS NP_949611.1 39937335 2692305 4823656..4824075 1 NC_005296.1 hypothetical protein 4824075 2692305 RPA4275 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949611.1 4823656 D 258594 CDS NP_949612.1 39937336 2692419 4824214..4824513 1 NC_005296.1 hypothetical protein 4824513 2692419 RPA4276 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949612.1 4824214 D 258594 CDS NP_949613.1 39937337 2691306 4826624..4827253 1 NC_005296.1 hypothetical protein 4827253 2691306 RPA4277 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949613.1 4826624 D 258594 CDS NP_949614.1 39937338 2691815 4827318..4827884 1 NC_005296.1 hypothetical protein 4827884 2691815 RPA4278 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949614.1 4827318 D 258594 CDS NP_949615.1 39937339 2689536 4828105..4828641 1 NC_005296.1 hypothetical protein 4828641 2689536 RPA4279 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949615.1 4828105 D 258594 CDS NP_949616.1 39937340 2689542 complement(4828657..4829655) 1 NC_005296.1 AraC family transcriptional regulator 4829655 2689542 RPA4280 Rhodopseudomonas palustris CGA009 AraC family transcriptional regulator NP_949616.1 4828657 R 258594 CDS NP_949617.1 39937341 2689544 4830173..4831345 1 NC_005296.1 hypothetical protein 4831345 2689544 RPA4281 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949617.1 4830173 D 258594 CDS NP_949618.1 39937342 2689549 4831532..4832005 1 NC_005296.1 photopigment and puc activator 4832005 2689549 RPA4282 Rhodopseudomonas palustris CGA009 photopigment and puc activator NP_949618.1 4831532 D 258594 CDS NP_949619.1 39937343 2689560 complement(4832018..4832923) 1 NC_005296.1 LysR family transcriptional regulator 4832923 2689560 RPA4283 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_949619.1 4832018 R 258594 CDS NP_949620.1 39937344 2689943 4833016..4833657 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; YceI like family protein 4833657 2689943 RPA4284 Rhodopseudomonas palustris CGA009 YceI like family protein NP_949620.1 4833016 D 258594 CDS NP_949621.1 39937345 2689552 4833734..4834324 1 NC_005296.1 hypothetical protein 4834324 2689552 RPA4285 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949621.1 4833734 D 258594 CDS NP_949622.1 39937346 2692592 4834367..4835170 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; catalytic LigB subunit of aromatic ring-opening dioxygenase 4835170 2692592 RPA4286 Rhodopseudomonas palustris CGA009 catalytic LigB subunit of aromatic ring-opening dioxygenase NP_949622.1 4834367 D 258594 CDS NP_949623.1 39937347 2692437 complement(4835541..4836173) 1 NC_005296.1 hypothetical protein 4836173 2692437 RPA4287 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949623.1 4835541 R 258594 CDS NP_949624.1 39937348 2689561 4836310..4837083 1 NC_005296.1 hypothetical protein 4837083 2689561 RPA4288 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949624.1 4836310 D 258594 CDS NP_949625.1 39937349 2689681 4837083..4837640 1 NC_005296.1 dual use protein Tyr:Ser/Thr phosphatase 4837640 2689681 RPA4289 Rhodopseudomonas palustris CGA009 dual use protein Tyr:Ser/Thr phosphatase NP_949625.1 4837083 D 258594 CDS NP_949626.1 39937350 2689711 4837773..4838222 1 NC_005296.1 hypothetical protein 4838222 2689711 RPA4290 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949626.1 4837773 D 258594 CDS NP_949627.1 39937351 2690915 4838558..4838713 1 NC_005296.1 light harvesting protein B-800-850 beta subunit B 4838713 pucBb 2690915 pucBb Rhodopseudomonas palustris CGA009 light harvesting protein B-800-850 beta subunit B NP_949627.1 4838558 D 258594 CDS NP_949628.1 39937352 2689917 4838726..4838926 1 NC_005296.1 light harvesting protein B-800-850 alpha subunit B 4838926 pucAb 2689917 pucAb Rhodopseudomonas palustris CGA009 light harvesting protein B-800-850 alpha subunit B NP_949628.1 4838726 D 258594 CDS NP_949629.1 39937353 2689710 4839395..4839613 1 NC_005296.1 hypothetical protein 4839613 2689710 RPA4293 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949629.1 4839395 D 258594 CDS NP_949630.1 39937354 2689718 complement(4840036..4841637) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4841637 2689718 RPA4294 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949630.1 4840036 R 258594 CDS NP_949631.1 39937355 2689771 complement(4841675..4842967) 1 NC_005296.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 4842967 purA 2689771 purA Rhodopseudomonas palustris CGA009 adenylosuccinate synthetase NP_949631.1 4841675 R 258594 CDS NP_949632.1 39937356 2689794 complement(4843263..4843796) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4843796 2689794 RPA4296 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949632.1 4843263 R 258594 CDS NP_949633.1 39937357 2689933 4843966..4844790 1 NC_005296.1 aldose reductase 4844790 2689933 RPA4297 Rhodopseudomonas palustris CGA009 aldose reductase NP_949633.1 4843966 D 258594 CDS NP_949634.1 39937358 2689773 4845043..4845702 1 NC_005296.1 ATP/GTP-binding motif-containing protein 4845702 2689773 RPA4298 Rhodopseudomonas palustris CGA009 ATP/GTP-binding motif-containing protein NP_949634.1 4845043 D 258594 CDS NP_949635.1 39937359 2689994 4845862..4846791 1 NC_005296.1 DMT family permease 4846791 2689994 RPA4299 Rhodopseudomonas palustris CGA009 DMT family permease NP_949635.1 4845862 D 258594 CDS NP_949636.1 39937360 2689903 4847325..4848356 1 NC_005296.1 DMT family permease 4848356 2689903 RPA4300 Rhodopseudomonas palustris CGA009 DMT family permease NP_949636.1 4847325 D 258594 CDS NP_949637.1 39937361 2690002 complement(4848372..4848566) 1 NC_005296.1 hypothetical protein 4848566 2690002 RPA4301 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949637.1 4848372 R 258594 CDS NP_949638.1 39937362 2690734 complement(4848828..4851020) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 4851020 2690734 RPA4302 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_949638.1 4848828 R 258594 CDS NP_949639.1 39937363 2690000 complement(4851150..4852121) 1 NC_005296.1 rubrerythrin 4852121 2690000 RPA4303 Rhodopseudomonas palustris CGA009 rubrerythrin NP_949639.1 4851150 R 258594 CDS NP_949640.1 39937364 2692438 4852302..4853657 1 NC_005296.1 hypothetical protein 4853657 2692438 RPA4304 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949640.1 4852302 D 258594 CDS NP_949641.1 39937365 2691911 complement(4853852..4854190) 1 NC_005296.1 hypothetical protein 4854190 2691911 RPA4305 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949641.1 4853852 R 258594 CDS NP_949642.1 39937366 2690017 complement(4854274..4855959) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 4855959 2690017 RPA4306 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_949642.1 4854274 R 258594 CDS NP_949643.1 39937367 2690027 complement(4856166..4857851) 1 NC_005296.1 methyl-accepting chemotaxis receptor/sensory transducer 4857851 2690027 RPA4307 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_949643.1 4856166 R 258594 CDS NP_949644.1 39937368 2689368 complement(4858096..4859685) 1 NC_005296.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 4859685 serA2 2689368 serA2 Rhodopseudomonas palustris CGA009 D-3-phosphoglycerate dehydrogenase NP_949644.1 4858096 R 258594 CDS NP_949645.1 39937369 2690039 complement(4859855..4861027) 1 NC_005296.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 4861027 serC 2690039 serC Rhodopseudomonas palustris CGA009 phosphoserine aminotransferase NP_949645.1 4859855 R 258594 CDS NP_949646.1 39937370 2692440 complement(4861265..4861714) 1 NC_005296.1 hypothetical protein 4861714 2692440 RPA4310 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949646.1 4861265 R 258594 CDS NP_949647.1 39937371 2689837 complement(4861753..4863057) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis sensory transducer 4863057 2689837 RPA4311 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949647.1 4861753 R 258594 CDS NP_949648.1 39937372 2689925 complement(4863032..4863556) 1 NC_005296.1 methyl-accepting chemotaxis sensory transducer 4863556 2689925 RPA4312 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949648.1 4863032 R 258594 CDS NP_949649.1 39937373 2690870 complement(4863729..4864199) 1 NC_005296.1 acetyltransfersase 4864199 2690870 RPA4313 Rhodopseudomonas palustris CGA009 acetyltransfersase NP_949649.1 4863729 R 258594 CDS NP_949650.1 39937374 2692444 complement(4864211..4864804) 1 NC_005296.1 glutathione S-transferase 4864804 gstA2 2692444 gstA2 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_949650.1 4864211 R 258594 CDS NP_949651.1 39937375 2689373 complement(4864870..4865697) 1 NC_005296.1 hypothetical protein 4865697 2689373 RPA4315 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949651.1 4864870 R 258594 CDS NP_949652.1 39937376 2689378 complement(4865804..4866679) 1 NC_005296.1 hypothetical protein 4866679 2689378 RPA4316 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949652.1 4865804 R 258594 CDS NP_949653.1 39937377 2692591 complement(4866990..4868342) 1 NC_005296.1 major facilitator superfamily protein 4868342 2692591 RPA4317 Rhodopseudomonas palustris CGA009 major facilitator superfamily protein NP_949653.1 4866990 R 258594 CDS NP_949654.1 39937378 2689391 complement(4868426..4869778) 1 NC_005296.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 4869778 glmM 2689391 glmM Rhodopseudomonas palustris CGA009 phosphoglucosamine mutase NP_949654.1 4868426 R 258594 CDS NP_949655.1 39937379 2690723 complement(4869980..4870141) 1 NC_005296.1 hypothetical protein 4870141 2690723 RPA4319 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949655.1 4869980 R 258594 CDS NP_949656.1 39937380 2692450 4870306..4871445 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; L-lactate dehydrogenase 4871445 lldA 2692450 lldA Rhodopseudomonas palustris CGA009 L-lactate dehydrogenase NP_949656.1 4870306 D 258594 CDS NP_949657.1 39937381 2689386 4871637..4872452 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; enoyl-CoA hydratase paaG 4872452 paaG3 2689386 paaG3 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase paaG NP_949657.1 4871637 D 258594 CDS NP_949658.1 39937382 2689751 4872601..4873059 1 NC_005296.1 chemotaxis protein CheY 4873059 2689751 RPA4322 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_949658.1 4872601 D 258594 CDS NP_949659.1 39937383 2689755 4873169..4874002 1 NC_005296.1 hypothetical protein 4874002 2689755 RPA4323 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949659.1 4873169 D 258594 CDS NP_949660.1 39937384 2692453 4873999..4874490 1 NC_005296.1 hypothetical protein 4874490 2692453 RPA4324 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949660.1 4873999 D 258594 CDS NP_949661.1 39937385 2689759 complement(4874622..4875458) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; shikimate 5-dehydrogenase 4875458 aroE 2689759 aroE Rhodopseudomonas palustris CGA009 shikimate 5-dehydrogenase NP_949661.1 4874622 R 258594 CDS NP_949662.1 39937386 2692576 complement(4875560..4877311) 1 NC_005296.1 sulfate transporter family protein 4877311 sulP 2692576 sulP Rhodopseudomonas palustris CGA009 sulfate transporter family protein NP_949662.1 4875560 R 258594 CDS NP_949663.1 39937387 2690707 complement(4877353..4877622) 1 NC_005296.1 XRE family transcriptional regulator 4877622 2690707 RPA4327 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_949663.1 4877353 R 258594 CDS NP_949664.1 39937388 2689766 complement(4877790..4879841) 1 NC_005296.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4879841 2689766 RPA4328 Rhodopseudomonas palustris CGA009 elongation factor G NP_949664.1 4877790 R 258594 CDS NP_949665.1 39937389 2691964 complement(4880054..4880527) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4880527 2691964 RPA4329 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949665.1 4880054 R 258594 CDS NP_949666.1 39937390 2691259 complement(4880757..4881272) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4881272 2691259 RPA4330 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949666.1 4880757 R 258594 CDS NP_949667.1 39937391 2691974 complement(4881397..4882632) 1 NC_005296.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 4882632 aatA 2691974 aatA Rhodopseudomonas palustris CGA009 aspartate aminotransferase NP_949667.1 4881397 R 258594 CDS NP_949668.1 39937392 2691979 4883013..4883666 1 NC_005296.1 glutathione S-transferase 4883666 gstA1 2691979 gstA1 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_949668.1 4883013 D 258594 CDS NP_949669.1 39937393 2691971 4884085..4885248 1 NC_005296.1 glucose sorbosone dehydrogenase 4885248 2691971 RPA4333 Rhodopseudomonas palustris CGA009 glucose sorbosone dehydrogenase NP_949669.1 4884085 D 258594 CDS NP_949670.1 39937394 2691988 4885462..4886310 1 NC_005296.1 phospholipid/glycerol acyltransferase 4886310 2691988 RPA4334 Rhodopseudomonas palustris CGA009 phospholipid/glycerol acyltransferase NP_949670.1 4885462 D 258594 CDS NP_949671.1 39937395 2692582 complement(4886317..4887036) 1 NC_005296.1 unwinds double stranded DNA; replicative DNA helicase 4887036 2692582 RPA4335 Rhodopseudomonas palustris CGA009 replicative DNA helicase NP_949671.1 4886317 R 258594 CDS NP_949672.1 39937396 2692008 4887317..4888258 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; aldo/keto reductase 4888258 2692008 RPA4336 Rhodopseudomonas palustris CGA009 aldo/keto reductase NP_949672.1 4887317 D 258594 CDS NP_949673.1 39937397 2692015 4888708..4889451 1 NC_005296.1 HAD-superfamily hydrolase 4889451 2692015 RPA4337 Rhodopseudomonas palustris CGA009 HAD-superfamily hydrolase NP_949673.1 4888708 D 258594 CDS NP_949674.1 39937398 2692019 complement(4889378..4890058) 1 NC_005296.1 TetR family transcriptional regulator 4890058 2692019 RPA4338 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949674.1 4889378 R 258594 CDS NP_949675.1 39937399 2692463 4890140..4890931 1 NC_005296.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4890931 2692463 RPA4339 Rhodopseudomonas palustris CGA009 enoyl-CoA hydratase NP_949675.1 4890140 D 258594 CDS NP_949676.1 39937400 2692571 complement(4890919..4891722) 1 NC_005296.1 lignin beta-ether hydrolase 4891722 ligE 2692571 ligE Rhodopseudomonas palustris CGA009 lignin beta-ether hydrolase NP_949676.1 4890919 R 258594 CDS NP_949677.1 39937401 2692007 complement(4891911..4893896) 1 NC_005296.1 beta-lactamase-like protein 4893896 2692007 RPA4341 Rhodopseudomonas palustris CGA009 beta-lactamase-like protein NP_949677.1 4891911 R 258594 CDS NP_949678.1 39937402 2692563 4894128..4895180 1 NC_005296.1 hypothetical protein 4895180 2692563 RPA4342 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949678.1 4894128 D 258594 CDS NP_949679.1 39937403 2692457 4895687..4898275 1 NC_005296.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 4898275 uvrB 2692457 uvrB Rhodopseudomonas palustris CGA009 excinuclease ABC subunit B NP_949679.1 4895687 D 258594 CDS NP_949680.1 39937404 2692044 4898366..4898599 1 NC_005296.1 hypothetical protein 4898599 2692044 RPA4344 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949680.1 4898366 D 258594 CDS NP_949681.1 39937405 2691135 complement(4898852..4899241) 1 NC_005296.1 hypothetical protein 4899241 2691135 RPA4345 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949681.1 4898852 R 258594 CDS NP_949682.1 39937406 2692467 complement(4899588..4900841) 1 NC_005296.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 4900841 2692467 RPA4346 Rhodopseudomonas palustris CGA009 acetyl-CoA acetyltransferase NP_949682.1 4899588 R 258594 CDS NP_949683.1 39937407 2692051 4901055..4901489 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4901489 2692051 RPA4347 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949683.1 4901055 D 258594 CDS NP_949684.1 39937408 2692572 4901974..4902405 1 NC_005296.1 hypothetical protein 4902405 2692572 RPA4348 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949684.1 4901974 D 258594 CDS NP_949685.1 39937409 2692060 4902523..4903053 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4903053 2692060 RPA4349 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949685.1 4902523 D 258594 CDS NP_949686.1 39937410 2692073 complement(4903203..4903349) 1 NC_005296.1 hypothetical protein 4903349 2692073 RPA4350 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949686.1 4903203 R 258594 CDS NP_949687.1 39937411 2692071 complement(4903498..4903980) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl dehydratase 4903980 2692071 RPA4351 Rhodopseudomonas palustris CGA009 acyl dehydratase NP_949687.1 4903498 R 258594 CDS NP_949688.1 39937412 2692085 complement(4903989..4904468) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl dehydratase 4904468 2692085 RPA4352 Rhodopseudomonas palustris CGA009 acyl dehydratase NP_949688.1 4903989 R 258594 CDS NP_949689.1 39937413 2692558 4904554..4904847 1 NC_005296.1 hypothetical protein 4904847 2692558 RPA4353 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949689.1 4904554 D 258594 CDS NP_949690.1 39937414 2692078 complement(4905007..4906104) 1 NC_005296.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 4906104 2692078 RPA4354 Rhodopseudomonas palustris CGA009 GTP-dependent nucleic acid-binding protein EngD NP_949690.1 4905007 R 258594 CDS NP_949691.1 39937415 2690985 complement(4906232..4906852) 1 NC_005296.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 4906852 pth 2690985 pth Rhodopseudomonas palustris CGA009 peptidyl-tRNA hydrolase NP_949691.1 4906232 R 258594 CDS NP_949692.1 39937416 2692106 complement(4906874..4907566) 1 NC_005296.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 4907566 ctc 2692106 ctc Rhodopseudomonas palustris CGA009 50S ribosomal protein L25 NP_949692.1 4906874 R 258594 CDS NP_949693.1 39937417 2690996 complement(4907864..4908142) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4908142 2690996 RPA4357 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949693.1 4907864 R 258594 CDS NP_949694.1 39937418 2692104 4908396..4909256 1 NC_005296.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 4909256 lgt 2692104 lgt Rhodopseudomonas palustris CGA009 prolipoprotein diacylglyceryl transferase NP_949694.1 4908396 D 258594 CDS NP_949695.1 39937419 2692111 4909253..4910392 1 NC_005296.1 hypothetical protein 4910392 2692111 RPA4359 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949695.1 4909253 D 258594 CDS NP_949696.1 39937420 2692553 4910389..4911162 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4911162 2692553 RPA4360 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949696.1 4910389 D 258594 CDS NP_949697.1 39937421 2690577 4911395..4912003 1 NC_005296.1 hypothetical protein 4912003 2690577 RPA4361 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949697.1 4911395 D 258594 CDS NP_949698.1 39937422 2692126 4912172..4913125 1 NC_005296.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 4913125 ribP 2692126 ribP Rhodopseudomonas palustris CGA009 ribose-phosphate pyrophosphokinase NP_949698.1 4912172 D 258594 CDS NP_949699.1 39937423 2690998 complement(4913326..4913871) 1 NC_005296.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; riboflavin synthase subunit beta 4913871 ribH 2690998 ribH Rhodopseudomonas palustris CGA009 riboflavin synthase subunit beta NP_949699.1 4913326 R 258594 CDS NP_949700.1 39937424 2690580 4914215..4914715 1 NC_005296.1 hypothetical protein 4914715 2690580 RPA4364 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949700.1 4914215 D 258594 CDS NP_949701.1 39937425 2690579 4914712..4915140 1 NC_005296.1 N-acetyltransferase GCN5 4915140 2690579 RPA4365 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_949701.1 4914712 D 258594 CDS NP_949702.1 39937426 2692142 4915228..4916070 1 NC_005296.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 4916070 proC 2692142 proC Rhodopseudomonas palustris CGA009 pyrroline-5-carboxylate reductase NP_949702.1 4915228 D 258594 CDS NP_949703.1 39937427 2690583 complement(4916339..4917727) 1 NC_005296.1 sensor signal transduction histidine kinase 4917727 2690583 RPA4367 Rhodopseudomonas palustris CGA009 sensor signal transduction histidine kinase NP_949703.1 4916339 R 258594 CDS NP_949704.1 39937428 2690567 complement(4918006..4918728) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; two-component transcriptional regulator 4918728 2690567 RPA4368 Rhodopseudomonas palustris CGA009 two-component transcriptional regulator NP_949704.1 4918006 R 258594 CDS NP_949705.1 39937429 2691854 complement(4918725..4919276) 1 NC_005296.1 MarR family transcriptional regulator 4919276 2691854 RPA4369 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_949705.1 4918725 R 258594 CDS NP_949706.1 39937430 2691853 4919559..4920671 1 NC_005296.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4920671 ilvE 2691853 ilvE Rhodopseudomonas palustris CGA009 branched-chain amino acid aminotransferase NP_949706.1 4919559 D 258594 CDS NP_949707.1 39937431 2690849 complement(4920918..4922705) 1 NC_005296.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 4922705 mutL 2690849 mutL Rhodopseudomonas palustris CGA009 DNA mismatch repair protein NP_949707.1 4920918 R 258594 CDS NP_949708.1 39937432 2692472 complement(4922941..4923360) 1 NC_005296.1 peptidyl-tRNA hydrolase domain-containing protein 4923360 2692472 RPA4372 Rhodopseudomonas palustris CGA009 peptidyl-tRNA hydrolase domain-containing protein NP_949708.1 4922941 R 258594 CDS NP_949709.1 39937433 2690570 complement(4923703..4925136) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; protease 4925136 2690570 RPA4373 Rhodopseudomonas palustris CGA009 protease NP_949709.1 4923703 R 258594 CDS NP_949710.1 39937434 2690858 complement(4925133..4926614) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; protease 4926614 2690858 RPA4374 Rhodopseudomonas palustris CGA009 protease NP_949710.1 4925133 R 258594 CDS NP_949711.1 39937435 2690568 complement(4926693..4927427) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4927427 2690568 RPA4375 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949711.1 4926693 R 258594 CDS NP_949712.1 39937436 2691751 complement(4927491..4928039) 1 NC_005296.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 4928039 lspA 2691751 lspA Rhodopseudomonas palustris CGA009 lipoprotein signal peptidase NP_949712.1 4927491 R 258594 CDS NP_949713.1 39937437 2692544 complement(4928148..4931165) 1 NC_005296.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 4931165 ileS 2692544 ileS Rhodopseudomonas palustris CGA009 isoleucyl-tRNA synthetase NP_949713.1 4928148 R 258594 CDS NP_949714.1 39937438 2692531 complement(4931347..4931919) 1 NC_005296.1 maltose O-acetyltransferase 4931919 2692531 RPA4378 Rhodopseudomonas palustris CGA009 maltose O-acetyltransferase NP_949714.1 4931347 R 258594 CDS NP_949715.1 39937439 2691199 complement(4931916..4932884) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; riboflavin biosynthesis protein RibF 4932884 ribF 2691199 ribF Rhodopseudomonas palustris CGA009 riboflavin biosynthesis protein RibF NP_949715.1 4931916 R 258594 CDS NP_949716.1 39937440 2691747 complement(4933007..4933702) 1 NC_005296.1 ribonuclease T2 4933702 2691747 RPA4380 Rhodopseudomonas palustris CGA009 ribonuclease T2 NP_949716.1 4933007 R 258594 CDS NP_949717.1 39937441 2690894 complement(4933807..4934268) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4934268 2690894 RPA4381 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949717.1 4933807 R 258594 CDS NP_949718.1 39937442 2692539 4934435..4934725 1 NC_005296.1 hypothetical protein 4934725 2692539 RPA4382 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949718.1 4934435 D 258594 CDS NP_949719.1 39937443 2692542 4934735..4935268 1 NC_005296.1 hypothetical protein 4935268 2692542 RPA4383 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949719.1 4934735 D 258594 CDS NP_949720.1 39937444 2691754 4935410..4935790 1 NC_005296.1 hypothetical protein 4935790 2691754 RPA4384 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949720.1 4935410 D 258594 CDS NP_949721.1 39937445 2690892 4935808..4938261 1 NC_005296.1 TonB-dependent receptor 4938261 PA0781 2690892 PA0781 Rhodopseudomonas palustris CGA009 TonB-dependent receptor NP_949721.1 4935808 D 258594 CDS NP_949722.1 39937446 2691764 4938474..4938836 1 NC_005296.1 hypothetical protein 4938836 2691764 RPA4386 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949722.1 4938474 D 258594 CDS NP_949723.1 39937447 2690874 4938984..4941257 1 NC_005296.1 ferrichrome-iron receptor 4941257 2690874 RPA4387 Rhodopseudomonas palustris CGA009 ferrichrome-iron receptor NP_949723.1 4938984 D 258594 CDS NP_949724.1 39937448 2691767 complement(4941280..4941831) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; N-acetyltransferase GCN5 4941831 2691767 RPA4388 Rhodopseudomonas palustris CGA009 N-acetyltransferase GCN5 NP_949724.1 4941280 R 258594 CDS NP_949725.1 39937449 2691210 complement(4941839..4943701) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; small conductance mechanosensitive (MscS) Ion channel 4943701 2691210 RPA4389 Rhodopseudomonas palustris CGA009 small conductance mechanosensitive (MscS) Ion channel NP_949725.1 4941839 R 258594 CDS NP_949726.1 39937450 2692521 complement(4943753..4944241) 1 NC_005296.1 NUDIX hydrolase 4944241 2692521 RPA4390 Rhodopseudomonas palustris CGA009 NUDIX hydrolase NP_949726.1 4943753 R 258594 CDS NP_949727.1 39937451 2692489 4944376..4945257 1 NC_005296.1 metallophosphoesterase 4945257 2692489 RPA4391 Rhodopseudomonas palustris CGA009 metallophosphoesterase NP_949727.1 4944376 D 258594 CDS NP_949728.1 39937452 2691213 complement(4945303..4945851) 1 NC_005296.1 hypothetical protein 4945851 2691213 RPA4392 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949728.1 4945303 R 258594 CDS NP_949729.1 39937453 2691229 complement(4946115..4946330) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 4946330 2691229 RPA4393 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949729.1 4946115 R 258594 CDS NP_949730.1 39937454 2691791 complement(4946355..4947989) 1 NC_005296.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 4947989 aceA 2691791 aceA Rhodopseudomonas palustris CGA009 isocitrate lyase NP_949730.1 4946355 R 258594 CDS NP_949731.1 39937455 2692520 4948203..4949645 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; XRE family transcriptional regulator 4949645 2692520 RPA4395 Rhodopseudomonas palustris CGA009 XRE family transcriptional regulator NP_949731.1 4948203 D 258594 CDS NP_949732.1 39937456 2691236 4950947..4952305 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; lytic murein transglycosylase 4952305 2691236 RPA4396 Rhodopseudomonas palustris CGA009 lytic murein transglycosylase NP_949732.1 4950947 D 258594 CDS NP_949733.1 39937457 2691238 4952405..4953571 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; extracellular ligand-binding receptor 4953571 2691238 RPA4397 Rhodopseudomonas palustris CGA009 extracellular ligand-binding receptor NP_949733.1 4952405 D 258594 CDS NP_949734.1 39937458 2690889 4953733..4954497 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter ATP-binding protein 4954497 2690889 RPA4398 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter ATP-binding protein NP_949734.1 4953733 D 258594 CDS NP_949735.1 39937459 2691801 4954639..4955631 1 NC_005296.1 branched-chain amino acid transport system ATP-binding protein 4955631 2691801 RPA4399 Rhodopseudomonas palustris CGA009 branched-chain amino acid transport system ATP-binding protein NP_949735.1 4954639 D 258594 CDS NP_949736.1 39937460 2691130 4955628..4956653 1 NC_005296.1 inner-membrane translocator 4956653 2691130 RPA4400 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949736.1 4955628 D 258594 CDS NP_949737.1 39937461 2689067 4956650..4957717 1 NC_005296.1 inner-membrane translocator 4957717 2689067 RPA4401 Rhodopseudomonas palustris CGA009 inner-membrane translocator NP_949737.1 4956650 D 258594 CDS NP_949738.1 39937462 2692972 4958088..4958396 1 NC_005296.1 hypothetical protein 4958396 2692972 RPA4402 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949738.1 4958088 D 258594 CDS NP_949739.1 39937463 2692321 4958641..4959741 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; morphinone reductase 4959741 2692321 RPA4403 Rhodopseudomonas palustris CGA009 morphinone reductase NP_949739.1 4958641 D 258594 CDS NP_949740.1 39937464 2692333 complement(4960215..4962005) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; family 1 extracellular solute-binding protein 4962005 2692333 RPA4404 Rhodopseudomonas palustris CGA009 family 1 extracellular solute-binding protein NP_949740.1 4960215 R 258594 CDS NP_949741.1 39937465 2691118 complement(4962078..4962407) 1 NC_005296.1 hypothetical protein 4962407 2691118 RPA4405 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949741.1 4962078 R 258594 CDS NP_949742.1 39937466 2692511 complement(4962415..4963221) 1 NC_005296.1 binding-protein-dependent transport system inner membrane protein 4963221 2692511 RPA4406 Rhodopseudomonas palustris CGA009 binding-protein-dependent transport system inner membrane protein NP_949742.1 4962415 R 258594 CDS NP_949743.1 39937467 2690358 complement(4963221..4964123) 1 NC_005296.1 binding-protein-dependent transport systems inner membrane component 4964123 2690358 RPA4407 Rhodopseudomonas palustris CGA009 binding-protein-dependent transport systems inner membrane component NP_949743.1 4963221 R 258594 CDS NP_949744.1 39937468 2692991 complement(4964123..4965223) 1 NC_005296.1 sugar ABC transporter ATP-binding protein 4965223 2692991 RPA4408 Rhodopseudomonas palustris CGA009 sugar ABC transporter ATP-binding protein NP_949744.1 4964123 R 258594 CDS NP_949745.1 39937469 2692992 complement(4965236..4966315) 1 NC_005296.1 sugar ABC transporter ATP-binding protein 4966315 2692992 RPA4409 Rhodopseudomonas palustris CGA009 sugar ABC transporter ATP-binding protein NP_949745.1 4965236 R 258594 CDS NP_949746.1 39937470 2690881 complement(4966312..4967847) 1 NC_005296.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 4967847 glpD 2690881 glpD Rhodopseudomonas palustris CGA009 glycerol-3-phosphate dehydrogenase NP_949746.1 4966312 R 258594 CDS NP_949747.1 39937471 2690869 complement(4968043..4968840) 1 NC_005296.1 glycerol-3-phosphate regulon repressor GlpR 4968840 glpR 2690869 glpR Rhodopseudomonas palustris CGA009 glycerol-3-phosphate regulon repressor GlpR NP_949747.1 4968043 R 258594 CDS NP_949748.1 39937472 2693000 complement(4969028..4969645) 1 NC_005296.1 hypothetical protein 4969645 2693000 RPA4412 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949748.1 4969028 R 258594 CDS NP_949749.1 39937473 2690645 complement(4969663..4970277) 1 NC_005296.1 TetR family transcriptional regulator 4970277 2690645 RPA4413 Rhodopseudomonas palustris CGA009 TetR family transcriptional regulator NP_949749.1 4969663 R 258594 CDS NP_949750.1 39937474 2690590 complement(4970295..4973432) 1 NC_005296.1 RND efflux transporter 4973432 2690590 RPA4414 Rhodopseudomonas palustris CGA009 RND efflux transporter NP_949750.1 4970295 R 258594 CDS NP_949751.1 39937475 2689458 complement(4973454..4974557) 1 NC_005296.1 component of multidrug efflux system 4974557 2689458 RPA4415 Rhodopseudomonas palustris CGA009 component of multidrug efflux system NP_949751.1 4973454 R 258594 CDS NP_949752.1 39937476 2689090 complement(4974669..4975148) 1 NC_005296.1 hypothetical protein 4975148 2689090 RPA4416 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949752.1 4974669 R 258594 CDS NP_949753.1 39937477 2692448 complement(4975255..4977876) 1 NC_005296.1 sensor histidine kinase 4977876 2692448 RPA4417 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_949753.1 4975255 R 258594 CDS NP_949754.1 39937478 2691673 4978268..4978483 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; CsbD-like protein 4978483 2691673 RPA4418 Rhodopseudomonas palustris CGA009 CsbD-like protein NP_949754.1 4978268 D 258594 CDS NP_949755.1 39937479 2688732 complement(4978588..4980174) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; gamma-glutamyltransferase 4980174 ggt3 2688732 ggt3 Rhodopseudomonas palustris CGA009 gamma-glutamyltransferase NP_949755.1 4978588 R 258594 CDS NP_949756.1 39937480 2690589 4980422..4980637 1 NC_005296.1 SlyX family protein 4980637 2690589 RPA4420 Rhodopseudomonas palustris CGA009 SlyX family protein NP_949756.1 4980422 D 258594 CDS NP_949757.1 39937481 2690861 complement(4980789..4982339) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; AMP-dependent synthetase/ligase 4982339 2690861 RPA4421 Rhodopseudomonas palustris CGA009 AMP-dependent synthetase/ligase NP_949757.1 4980789 R 258594 CDS NP_949758.1 39937482 2693005 complement(4982674..4983387) 1 NC_005296.1 Crp/Fnr family transcriptional regulator 4983387 2693005 RPA4422 Rhodopseudomonas palustris CGA009 Crp/Fnr family transcriptional regulator NP_949758.1 4982674 R 258594 CDS NP_949759.1 39937483 2690873 complement(4983518..4983931) 1 NC_005296.1 hypothetical protein 4983931 2690873 RPA4423 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949759.1 4983518 R 258594 CDS NP_949760.1 39937484 2690863 4984072..4984920 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; beta-lactamase-like protein 4984920 2690863 RPA4424 Rhodopseudomonas palustris CGA009 beta-lactamase-like protein NP_949760.1 4984072 D 258594 CDS NP_949761.1 39937485 2690875 4985030..4985872 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 4985872 2690875 RPA4425 Rhodopseudomonas palustris CGA009 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase NP_949761.1 4985030 D 258594 CDS NP_949762.1 39937486 2692995 4985991..4986608 1 NC_005296.1 glutathione S-transferase 4986608 2692995 RPA4426 Rhodopseudomonas palustris CGA009 glutathione S-transferase NP_949762.1 4985991 D 258594 CDS NP_949763.1 39937487 2692996 complement(4986620..4987168) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methylated-DNA--protein-cysteine methyltransferase 4987168 ogt1 2692996 ogt1 Rhodopseudomonas palustris CGA009 methylated-DNA--protein-cysteine methyltransferase NP_949763.1 4986620 R 258594 CDS NP_949764.1 39937488 2692993 complement(4987215..4987754) 1 NC_005296.1 glucosyltransferase I 4987754 2692993 RPA4428 Rhodopseudomonas palustris CGA009 glucosyltransferase I NP_949764.1 4987215 R 258594 CDS NP_949765.1 39937489 2692501 complement(4987875..4989020) 1 NC_005296.1 hypothetical protein 4989020 2692501 RPA4429 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949765.1 4987875 R 258594 CDS NP_949766.1 39937490 2691255 complement(4989025..4991355) 1 NC_005296.1 TonB-dependent receptor 4991355 2691255 RPA4430 Rhodopseudomonas palustris CGA009 TonB-dependent receptor NP_949766.1 4989025 R 258594 CDS NP_949767.1 39937491 2690893 4998672..5000702 1 NC_005296.1 peptidase M23B 5000702 2690893 RPA4431 Rhodopseudomonas palustris CGA009 peptidase M23B NP_949767.1 4998672 D 258594 CDS NP_949768.1 39937492 2690871 5000844..5002478 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; NHL repeat-containing protein 5002478 2690871 RPA4432 Rhodopseudomonas palustris CGA009 NHL repeat-containing protein NP_949768.1 5000844 D 258594 CDS NP_949769.1 39937493 2692471 complement(5002756..5005395) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; endopeptidase Clp ATP-binding subunit B 5005395 clpB 2692471 clpB Rhodopseudomonas palustris CGA009 endopeptidase Clp ATP-binding subunit B NP_949769.1 5002756 R 258594 CDS NP_949770.1 39937494 2690902 5005622..5006410 1 NC_005296.1 MOSC domain-containing protein 5006410 2690902 RPA4434 Rhodopseudomonas palustris CGA009 MOSC domain-containing protein NP_949770.1 5005622 D 258594 CDS NP_949771.1 39937495 2692535 complement(5006617..5007360) 1 NC_005296.1 hypothetical protein 5007360 2692535 RPA4435 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949771.1 5006617 R 258594 CDS NP_949772.1 39937496 2692469 complement(5007582..5008277) 1 NC_005296.1 methionine biosynthesis MetW 5008277 2692469 RPA4436 Rhodopseudomonas palustris CGA009 methionine biosynthesis MetW NP_949772.1 5007582 R 258594 CDS NP_949773.1 39937497 2690555 complement(5008280..5009482) 1 NC_005296.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 5009482 metX 2690555 metX Rhodopseudomonas palustris CGA009 homoserine O-acetyltransferase NP_949773.1 5008280 R 258594 CDS NP_949774.1 39937498 2690560 5009734..5010681 1 NC_005296.1 hypothetical protein 5010681 aro 2690560 aro Rhodopseudomonas palustris CGA009 hypothetical protein NP_949774.1 5009734 D 258594 CDS NP_949775.1 39937499 2690880 5010724..5011821 1 NC_005296.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 5011821 hisC 2690880 hisC Rhodopseudomonas palustris CGA009 histidinol-phosphate aminotransferase NP_949775.1 5010724 D 258594 CDS NP_949776.1 39937500 2690995 5011818..5012759 1 NC_005296.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 5012759 tyrC 2690995 tyrC Rhodopseudomonas palustris CGA009 cyclohexadienyl dehydrogenase NP_949776.1 5011818 D 258594 CDS NP_949777.1 39937501 2692551 complement(5013079..5014059) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Mg2+ transporter 5014059 corA 2692551 corA Rhodopseudomonas palustris CGA009 Mg2+ transporter NP_949777.1 5013079 R 258594 CDS NP_949778.1 39937502 2692560 5014406..5015089 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ErfK/YbiS/YcfS/YnhG protein 5015089 2692560 RPA4442 Rhodopseudomonas palustris CGA009 ErfK/YbiS/YcfS/YnhG protein NP_949778.1 5014406 D 258594 CDS NP_949779.1 39937503 2690997 5016593..5018221 1 NC_005296.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5018221 2690997 RPA4443 Rhodopseudomonas palustris CGA009 acyl-CoA synthetase NP_949779.1 5016593 D 258594 CDS NP_949780.1 39937504 2692569 5019052..5019897 1 NC_005296.1 hypothetical protein 5019897 2692569 RPA4444 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949780.1 5019052 D 258594 CDS NP_949781.1 39937505 2691134 complement(5019977..5020276) 1 NC_005296.1 hypothetical protein 5020276 2691134 RPA4445 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949781.1 5019977 R 258594 CDS NP_949782.1 39937506 2692565 complement(5020355..5020798) 1 NC_005296.1 hypothetical protein 5020798 2692565 RPA4446 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949782.1 5020355 R 258594 CDS NP_949783.1 39937507 2692458 complement(5020795..5021214) 1 NC_005296.1 hypothetical protein 5021214 2692458 RPA4447 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949783.1 5020795 R 258594 CDS NP_949784.1 39937508 2692559 complement(5021211..5021945) 1 NC_005296.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 5021945 2692559 RPA4448 Rhodopseudomonas palustris CGA009 RNA polymerase sigma factor NP_949784.1 5021211 R 258594 CDS NP_949785.1 39937509 2692462 5022729..5024420 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pmethyl-accepting chemotaxis receptor/sensory transducer 5024420 2692462 RPA4449 Rhodopseudomonas palustris CGA009 pmethyl-accepting chemotaxis receptor/sensory transducer NP_949785.1 5022729 D 258594 CDS NP_949786.1 39937510 2692447 5024628..5026223 1 NC_005296.1 hypothetical protein 5026223 2692447 RPA4450 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949786.1 5024628 D 258594 CDS NP_949787.1 39937511 2692452 5026213..5027448 1 NC_005296.1 hypothetical protein 5027448 2692452 RPA4451 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949787.1 5026213 D 258594 CDS NP_949788.1 39937512 2690721 5027445..5028905 1 NC_005296.1 pyridoxal-dependent decarboxylase 5028905 2690721 RPA4452 Rhodopseudomonas palustris CGA009 pyridoxal-dependent decarboxylase NP_949788.1 5027445 D 258594 CDS NP_949789.1 39937513 2692446 complement(5029184..5030011) 1 NC_005296.1 hypothetical protein 5030011 2692446 RPA4453 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949789.1 5029184 R 258594 CDS NP_949790.1 39937514 2691897 complement(5030013..5030606) 1 NC_005296.1 5-formyltetrahydrofolate cyclo-ligase 5030606 2691897 RPA4454 Rhodopseudomonas palustris CGA009 5-formyltetrahydrofolate cyclo-ligase NP_949790.1 5030013 R 258594 CDS NP_949791.1 39937515 2690999 5030895..5031479 1 NC_005296.1 hypothetical protein 5031479 2690999 RPA4455 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949791.1 5030895 D 258594 CDS NP_949792.1 39937516 2691007 5031753..5032292 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5032292 2691007 RPA4456 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949792.1 5031753 D 258594 CDS NP_949793.1 39937517 2691012 complement(5032374..5032763) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sulfide dehydrogenase 5032763 2691012 RPA4457 Rhodopseudomonas palustris CGA009 sulfide dehydrogenase NP_949793.1 5032374 R 258594 CDS NP_949794.1 39937518 2692443 complement(5032787..5033263) 1 NC_005296.1 isoprenylcysteine carboxyl methyltransferase 5033263 2692443 RPA4458 Rhodopseudomonas palustris CGA009 isoprenylcysteine carboxyl methyltransferase NP_949794.1 5032787 R 258594 CDS NP_949795.1 39937519 2691909 complement(5033288..5034580) 1 NC_005296.1 flavocytochrome C sulfide dehydrogenase flavoprotein subunit 5034580 dhsU2 2691909 dhsU2 Rhodopseudomonas palustris CGA009 flavocytochrome C sulfide dehydrogenase flavoprotein subunit NP_949795.1 5033288 R 258594 CDS NP_949796.1 39937520 2692436 complement(5034620..5035885) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; flavocytochrome C sulfide dehydrogenase flavoprotein subunit 5035885 dhsU1 2692436 dhsU1 Rhodopseudomonas palustris CGA009 flavocytochrome C sulfide dehydrogenase flavoprotein subunit NP_949796.1 5034620 R 258594 CDS NP_949797.1 39937521 2690731 complement(5035913..5036335) 1 NC_005296.1 cytochrome subunit of sulfide dehydrogenase 5036335 2690731 RPA4461 Rhodopseudomonas palustris CGA009 cytochrome subunit of sulfide dehydrogenase NP_949797.1 5035913 R 258594 CDS NP_949798.1 39937522 2690738 complement(5036372..5037511) 1 NC_005296.1 Lipocalin-like protein and Bos/Can/Equ allergen 5037511 2690738 RPA4462 Rhodopseudomonas palustris CGA009 Lipocalin-like protein and Bos/Can/Equ allergen NP_949798.1 5036372 R 258594 CDS NP_949799.1 39937523 2692433 complement(5037696..5038451) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; cytochrome 5038451 2692433 RPA4463 Rhodopseudomonas palustris CGA009 cytochrome NP_949799.1 5037696 R 258594 CDS NP_949800.1 39937524 2692428 complement(5038435..5039730) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sulfite dehydrogenase 5039730 soxC 2692428 soxC Rhodopseudomonas palustris CGA009 sulfite dehydrogenase NP_949800.1 5038435 R 258594 CDS NP_949801.1 39937525 2690903 complement(5039800..5041497) 1 NC_005296.1 sulfur/thiosulfate oxidation protein SoxB 5041497 soxB 2690903 soxB Rhodopseudomonas palustris CGA009 sulfur/thiosulfate oxidation protein SoxB NP_949801.1 5039800 R 258594 CDS NP_949802.1 39937526 2690914 complement(5041640..5041969) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sulfur oxidation protein SoxZ 5041969 soxZ2 2690914 soxZ2 Rhodopseudomonas palustris CGA009 sulfur oxidation protein SoxZ NP_949802.1 5041640 R 258594 CDS NP_949803.1 39937527 2692414 complement(5042008..5042472) 1 NC_005296.1 with SoxZ catalyzes the oxidation of sulfur compounds; sulfur oxidation protein SoxY 5042472 soxY2 2692414 soxY2 Rhodopseudomonas palustris CGA009 sulfur oxidation protein SoxY NP_949803.1 5042008 R 258594 CDS NP_949804.1 39937528 2690916 5042658..5043479 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5043479 2690916 RPA4468 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949804.1 5042658 D 258594 CDS NP_949805.1 39937529 2690918 5043493..5044236 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5044236 2690918 RPA4469 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949805.1 5043493 D 258594 CDS NP_949806.1 39937530 2692602 5044401..5044898 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5044898 2692602 RPA4470 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949806.1 5044401 D 258594 CDS NP_949807.1 39937531 2692421 complement(5045047..5045640) 1 NC_005296.1 hypothetical protein 5045640 2692421 RPA4471 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949807.1 5045047 R 258594 CDS NP_949808.1 39937532 2692418 complement(5045669..5046412) 1 NC_005296.1 c-type cytochrome biogenesis protein 5046412 2692418 RPA4472 Rhodopseudomonas palustris CGA009 c-type cytochrome biogenesis protein NP_949808.1 5045669 R 258594 CDS NP_949809.1 39937533 2691806 5046561..5046857 1 NC_005296.1 hypothetical protein 5046857 2691806 RPA4473 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949809.1 5046561 D 258594 CDS NP_949810.1 39937534 2691816 5046896..5047270 1 NC_005296.1 ArsR family transcriptional regulator 5047270 2691816 RPA4474 Rhodopseudomonas palustris CGA009 ArsR family transcriptional regulator NP_949810.1 5046896 D 258594 CDS NP_949811.1 39937535 2692411 5047347..5048549 1 NC_005296.1 hypothetical protein 5048549 2692411 RPA4475 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949811.1 5047347 D 258594 CDS NP_949812.1 39937536 2692416 complement(5048464..5048976) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5048976 2692416 RPA4476 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949812.1 5048464 R 258594 CDS NP_949813.1 39937537 2689107 complement(5049148..5050203) 1 NC_005296.1 hypothetical protein 5050203 2689107 RPA4477 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949813.1 5049148 R 258594 CDS NP_949814.1 39937538 2692406 complement(5050403..5050708) 1 NC_005296.1 hypothetical protein 5050708 2692406 RPA4478 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949814.1 5050403 R 258594 CDS NP_949815.1 39937539 2692392 complement(5050705..5053800) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; heavy metal cation efflux system protein 5053800 czcA3 2692392 czcA3 Rhodopseudomonas palustris CGA009 heavy metal cation efflux system protein NP_949815.1 5050705 R 258594 CDS NP_949816.1 39937540 2688827 complement(5053801..5054907) 1 NC_005296.1 RND divalent metal cation efflux membrane fusion protein CzcB 5054907 czcB 2688827 czcB Rhodopseudomonas palustris CGA009 RND divalent metal cation efflux membrane fusion protein CzcB NP_949816.1 5053801 R 258594 CDS NP_949817.1 39937541 2691917 complement(5055101..5056423) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis sensory transducer 5056423 2691917 RPA4481 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949817.1 5055101 R 258594 CDS NP_949818.1 39937542 2692387 complement(5056386..5056922) 1 NC_005296.1 methyl-accepting chemotaxis sensory transducer 5056922 2692387 RPA4482 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949818.1 5056386 R 258594 CDS NP_949819.1 39937543 2690648 complement(5057092..5058342) 1 NC_005296.1 methyl-accepting chemotaxis sensory transducer 5058342 2690648 RPA4483 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949819.1 5057092 R 258594 CDS NP_949820.1 39937544 2690654 complement(5058377..5058910) 1 NC_005296.1 methyl-accepting chemotaxis sensory transducer 5058910 2690654 RPA4484 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949820.1 5058377 R 258594 CDS NP_949821.1 39937545 2690660 complement(5059087..5060136) 1 NC_005296.1 A/G-specific adenine glycosylase 5060136 mutY 2690660 mutY Rhodopseudomonas palustris CGA009 A/G-specific adenine glycosylase NP_949821.1 5059087 R 258594 CDS NP_949822.1 39937546 2690679 5060243..5060722 1 NC_005296.1 hypothetical protein 5060722 2690679 RPA4486 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949822.1 5060243 D 258594 CDS NP_949823.1 39937547 2690680 5060865..5061539 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; twin-arginine translocation pathway signal 5061539 2690680 RPA4487 Rhodopseudomonas palustris CGA009 twin-arginine translocation pathway signal NP_949823.1 5060865 D 258594 CDS NP_949824.1 39937548 2692615 5062553..5062840 1 NC_005296.1 excinuclease ABC subunit C 5062840 2692615 RPA4488 Rhodopseudomonas palustris CGA009 excinuclease ABC subunit C NP_949824.1 5062553 D 258594 CDS NP_949825.1 39937549 2690684 5063290..5066823 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chromosome segregation protein SMC 5066823 2690684 RPA4489 Rhodopseudomonas palustris CGA009 chromosome segregation protein SMC NP_949825.1 5063290 D 258594 CDS NP_949826.1 39937550 2690681 5067098..5068078 1 NC_005296.1 hypothetical protein 5068078 2690681 RPA4490 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949826.1 5067098 D 258594 CDS NP_949827.1 39937551 2690686 complement(5068489..5071404) 1 NC_005296.1 hypothetical protein 5071404 2690686 RPA4491 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949827.1 5068489 R 258594 CDS NP_949828.1 39937552 2689944 5071736..5072281 1 NC_005296.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 5072281 apt 2689944 apt Rhodopseudomonas palustris CGA009 adenine phosphoribosyltransferase NP_949828.1 5071736 D 258594 CDS NP_949829.1 39937553 2689964 complement(5072490..5073155) 1 NC_005296.1 hypothetical protein 5073155 2689964 RPA4493 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949829.1 5072490 R 258594 CDS NP_949830.1 39937554 2692623 complement(5073214..5073987) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5073987 2692623 RPA4494 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949830.1 5073214 R 258594 CDS NP_949831.1 39937555 2692632 complement(5074168..5075364) 1 NC_005296.1 peptidase M48 Ste24p 5075364 htpX 2692632 htpX Rhodopseudomonas palustris CGA009 peptidase M48 Ste24p NP_949831.1 5074168 R 258594 CDS NP_949832.1 39937556 2691925 complement(5076071..5078230) 1 NC_005296.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; anthranilate synthase 5078230 trpG 2691925 trpG Rhodopseudomonas palustris CGA009 anthranilate synthase NP_949832.1 5076071 R 258594 CDS NP_949833.1 39937557 2691931 complement(5078463..5079113) 1 NC_005296.1 hypothetical protein 5079113 2691931 RPA4499 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949833.1 5078463 R 258594 CDS NP_949834.1 39937558 2691935 5079891..5080097 1 NC_005296.1 hypothetical protein 5080097 2691935 RPA4500 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949834.1 5079891 D 258594 CDS NP_949835.1 39937559 2692627 complement(5080134..5080352) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; PhnA protein 5080352 2692627 RPA4501 Rhodopseudomonas palustris CGA009 PhnA protein NP_949835.1 5080134 R 258594 CDS NP_949836.1 39937560 2689790 complement(5080486..5081175) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; outer membrane protein 5081175 2689790 RPA4502 Rhodopseudomonas palustris CGA009 outer membrane protein NP_949836.1 5080486 R 258594 CDS NP_949837.1 39937561 2692495 complement(5081408..5081668) 1 NC_005296.1 hypothetical protein 5081668 2692495 RPA4503 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949837.1 5081408 R 258594 CDS NP_949838.1 39937562 2689945 complement(5081847..5083757) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; AMP-dependent synthetase/ligase 5083757 2689945 RPA4504 Rhodopseudomonas palustris CGA009 AMP-dependent synthetase/ligase NP_949838.1 5081847 R 258594 CDS NP_949839.1 39937563 2692505 complement(5083938..5084684) 1 NC_005296.1 TPR repeat-containing protein 5084684 2692505 RPA4505 Rhodopseudomonas palustris CGA009 TPR repeat-containing protein NP_949839.1 5083938 R 258594 CDS NP_949840.1 39937564 2692652 complement(5084870..5085673) 1 NC_005296.1 short-chain alcohol dehydrogenase 5085673 2692652 RPA4506 Rhodopseudomonas palustris CGA009 short-chain alcohol dehydrogenase NP_949840.1 5084870 R 258594 CDS NP_949841.1 39937565 2692509 complement(5085773..5087557) 1 NC_005296.1 elongator protein 3/MiaB/NifB 5087557 2692509 RPA4507 Rhodopseudomonas palustris CGA009 elongator protein 3/MiaB/NifB NP_949841.1 5085773 R 258594 CDS NP_949842.1 39937566 2692656 complement(5088621..5088992) 1 NC_005296.1 hypothetical protein 5088992 2692656 RPA4508 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949842.1 5088621 R 258594 CDS NP_949843.1 39937567 2692388 complement(5088989..5091109) 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctM 5091109 2692388 RPA4509 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctM NP_949843.1 5088989 R 258594 CDS NP_949844.1 39937568 2692675 complement(5091256..5092203) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TRAP transporter solute receptor TAXI family protein 5092203 2692675 RPA4510 Rhodopseudomonas palustris CGA009 TRAP transporter solute receptor TAXI family protein NP_949844.1 5091256 R 258594 CDS NP_949845.1 39937569 2692386 5092359..5093624 1 NC_005296.1 major facilitator transporter 5093624 2692386 RPA4511 Rhodopseudomonas palustris CGA009 major facilitator transporter NP_949845.1 5092359 D 258594 CDS NP_949846.1 39937570 2692681 complement(5093642..5093953) 1 NC_005296.1 response regulator receiver 5093953 2692681 RPA4512 Rhodopseudomonas palustris CGA009 response regulator receiver NP_949846.1 5093642 R 258594 CDS NP_949847.1 39937571 2692682 complement(5094008..5095012) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; signal transduction histidine kinase 5095012 2692682 RPA4513 Rhodopseudomonas palustris CGA009 signal transduction histidine kinase NP_949847.1 5094008 R 258594 CDS NP_949848.1 39937572 2692685 5095094..5096794 1 NC_005296.1 alkaline phosphatase 5096794 2692685 RPA4514 Rhodopseudomonas palustris CGA009 alkaline phosphatase NP_949848.1 5095094 D 258594 CDS NP_949849.1 39937573 2690925 5096930..5097937 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5097937 2690925 RPA4515 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949849.1 5096930 D 258594 CDS NP_949850.1 39937574 2690937 5098179..5099393 1 NC_005296.1 cylclic diguanylate phosphodiesterase 5099393 vieA 2690937 vieA Rhodopseudomonas palustris CGA009 cylclic diguanylate phosphodiesterase NP_949850.1 5098179 D 258594 CDS NP_949851.1 39937575 2688950 complement(5099410..5099970) 1 NC_005296.1 hypothetical protein 5099970 2688950 RPA4517 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949851.1 5099410 R 258594 CDS NP_949852.1 39937576 2690951 5100110..5100445 1 NC_005296.1 hypothetical protein 5100445 2690951 RPA4518 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949852.1 5100110 D 258594 CDS NP_949853.1 39937577 2690953 complement(5100464..5101675) 1 NC_005296.1 hypothetical protein 5101675 2690953 RPA4519 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949853.1 5100464 R 258594 CDS NP_949854.1 39937578 2691932 complement(5101811..5102437) 1 NC_005296.1 NUDIX hydrolase 5102437 2691932 RPA4520 Rhodopseudomonas palustris CGA009 NUDIX hydrolase NP_949854.1 5101811 R 258594 CDS NP_949855.1 39937579 2688895 5102565..5102942 1 NC_005296.1 thioesterase 5102942 2688895 RPA4521 Rhodopseudomonas palustris CGA009 thioesterase NP_949855.1 5102565 D 258594 CDS NP_949856.1 39937580 2691938 complement(5102958..5103704) 1 NC_005296.1 haloacid dehalogenase 5103704 cbbY 2691938 cbbY Rhodopseudomonas palustris CGA009 haloacid dehalogenase NP_949856.1 5102958 R 258594 CDS NP_949857.1 39937581 2688746 complement(5103980..5104369) 1 NC_005296.1 chemotaxis protein CheY 5104369 2688746 RPA4523 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_949857.1 5103980 R 258594 CDS NP_949858.1 39937582 2691017 complement(5104629..5106185) 1 NC_005296.1 sensor histidine kinase 5106185 2691017 RPA4524 Rhodopseudomonas palustris CGA009 sensor histidine kinase NP_949858.1 5104629 R 258594 CDS NP_949859.1 39937583 2689003 5106564..5106995 1 NC_005296.1 hypothetical protein 5106995 2689003 RPA4525 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949859.1 5106564 D 258594 CDS NP_949860.1 39937584 2689002 5107465..5107899 1 NC_005296.1 hypothetical protein 5107899 2689002 RPA4526 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949860.1 5107465 D 258594 CDS NP_949861.1 39937585 2692699 complement(5108324..5109043) 1 NC_005296.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 5109043 maf 2692699 maf Rhodopseudomonas palustris CGA009 Maf-like protein NP_949861.1 5108324 R 258594 CDS NP_949862.1 39937586 2689005 complement(5109044..5110210) 1 NC_005296.1 hypothetical protein 5110210 2689005 RPA4528 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949862.1 5109044 R 258594 CDS NP_949863.1 39937587 2692684 complement(5110793..5111263) 1 NC_005296.1 protein tyrosine phosphatase 5111263 arsC4 2692684 arsC4 Rhodopseudomonas palustris CGA009 protein tyrosine phosphatase NP_949863.1 5110793 R 258594 CDS NP_949864.1 39937588 2692702 complement(5111319..5111810) 1 NC_005296.1 hypothetical protein 5111810 2692702 RPA4530 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949864.1 5111319 R 258594 CDS NP_949865.1 39937589 2689094 complement(5111807..5113102) 1 NC_005296.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 5113102 hisD 2689094 hisD Rhodopseudomonas palustris CGA009 histidinol dehydrogenase NP_949865.1 5111807 R 258594 CDS NP_949866.1 39937590 2689016 complement(5113226..5113681) 1 NC_005296.1 hypothetical protein 5113681 2689016 RPA4532 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949866.1 5113226 R 258594 CDS NP_949867.1 39937591 2692712 complement(5113701..5114990) 1 NC_005296.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5114990 murA 2692712 murA Rhodopseudomonas palustris CGA009 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NP_949867.1 5113701 R 258594 CDS NP_949868.1 39937592 2692720 complement(5115149..5115622) 1 NC_005296.1 hypothetical protein 5115622 2692720 RPA4534 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949868.1 5115149 R 258594 CDS NP_949869.1 39937593 2692510 5115658..5115945 1 NC_005296.1 hypothetical protein 5115945 2692510 RPA4535 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949869.1 5115658 D 258594 CDS NP_949870.1 39937594 2691952 complement(5116011..5117702) 1 NC_005296.1 cyclic nucleotide regulated pyridine nucleotide-disulfide oxidoreductase 5117702 2691952 RPA4536 Rhodopseudomonas palustris CGA009 cyclic nucleotide regulated pyridine nucleotide-disulfide oxidoreductase NP_949870.1 5116011 R 258594 CDS NP_949871.1 39937595 2689047 5118019..5118465 1 NC_005296.1 hypothetical protein 5118465 2689047 RPA4537 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949871.1 5118019 D 258594 CDS NP_949872.1 39937596 2693014 complement(5118975..5119751) 1 NC_005296.1 hypothetical protein 5119751 2693014 RPA4538 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949872.1 5118975 R 258594 CDS NP_949873.1 39937597 2689032 complement(5119758..5120303) 1 NC_005296.1 hypothetical protein 5120303 2689032 RPA4539 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949873.1 5119758 R 258594 CDS NP_949874.1 39937598 2688756 5120345..5120974 1 NC_005296.1 hypothetical protein 5120974 2688756 RPA4540 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949874.1 5120345 D 258594 CDS NP_949875.1 39937599 2691682 complement(5121110..5121649) 1 NC_005296.1 DNA invertase gene rlgA 5121649 rlgA 2691682 rlgA Rhodopseudomonas palustris CGA009 DNA invertase gene rlgA NP_949875.1 5121110 R 258594 CDS NP_949876.1 39937600 2691690 5122393..5122692 1 NC_005296.1 hypothetical protein 5122692 2691690 RPA4542 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949876.1 5122393 D 258594 CDS NP_949877.1 39937601 2689035 complement(5122780..5123184) 1 NC_005296.1 hypothetical protein 5123184 2689035 RPA4543 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949877.1 5122780 R 258594 CDS NP_949878.1 39937602 2691691 complement(5123181..5123774) 1 NC_005296.1 hypothetical protein 5123774 2691691 RPA4544 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949878.1 5123181 R 258594 CDS NP_949879.1 39937603 2692735 complement(5123771..5124109) 1 NC_005296.1 hypothetical protein 5124109 2692735 RPA4545 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949879.1 5123771 R 258594 CDS NP_949880.1 39937604 2692747 complement(5124106..5126418) 1 NC_005296.1 hypothetical protein 5126418 2692747 RPA4546 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949880.1 5124106 R 258594 CDS NP_949881.1 39937605 2689045 complement(5126565..5127233) 1 NC_005296.1 hypothetical protein 5127233 2689045 RPA4547 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949881.1 5126565 R 258594 CDS NP_949882.1 39937606 2692748 complement(5127230..5127577) 1 NC_005296.1 hypothetical protein 5127577 2692748 RPA4548 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949882.1 5127230 R 258594 CDS NP_949883.1 39937607 2689048 complement(5127998..5129380) 1 NC_005296.1 Phage integrase 5129380 2689048 RPA4549 Rhodopseudomonas palustris CGA009 Phage integrase NP_949883.1 5127998 R 258594 CDS NP_949884.1 39937608 2689053 5129811..5130200 1 NC_005296.1 hypothetical protein 5130200 2689053 RPA4550 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949884.1 5129811 D 258594 CDS NP_949885.1 39937609 2689058 5130324..5131613 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5131613 2689058 RPA4551 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949885.1 5130324 D 258594 CDS NP_949886.1 39937610 2691033 complement(5131650..5132891) 1 NC_005296.1 4-hydroxybutyrate-CoA transferase/hydrolase 5132891 2691033 RPA4552 Rhodopseudomonas palustris CGA009 4-hydroxybutyrate-CoA transferase/hydrolase NP_949886.1 5131650 R 258594 CDS NP_949887.1 39937611 2691030 complement(5132918..5134084) 1 NC_005296.1 acyl-CoA dehydrogenase 5134084 2691030 RPA4553 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_949887.1 5132918 R 258594 CDS NP_949888.1 39937612 2689061 complement(5134138..5135427) 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctM 5135427 dctM2 2689061 dctM2 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctM NP_949888.1 5134138 R 258594 CDS NP_949889.1 39937613 2692763 complement(5135439..5135990) 1 NC_005296.1 TRAP dicarboxylate family transporter subunit DctQ 5135990 2692763 RPA4555 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctQ NP_949889.1 5135439 R 258594 CDS NP_949890.1 39937614 2689130 complement(5136024..5137049) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; TRAP dicarboxylate family transporter subunit DctP 5137049 2689130 RPA4556 Rhodopseudomonas palustris CGA009 TRAP dicarboxylate family transporter subunit DctP NP_949890.1 5136024 R 258594 CDS NP_949891.1 39937615 2692755 5137253..5138449 1 NC_005296.1 hypothetical protein 5138449 2692755 RPA4557 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949891.1 5137253 D 258594 CDS NP_949892.1 39937616 2689109 5138494..5138946 1 NC_005296.1 acyl dehydratase 5138946 2689109 RPA4558 Rhodopseudomonas palustris CGA009 acyl dehydratase NP_949892.1 5138494 D 258594 CDS NP_949893.1 39937617 2692769 5138946..5139794 1 NC_005296.1 citrate lyase subunit beta 5139794 2692769 RPA4559 Rhodopseudomonas palustris CGA009 citrate lyase subunit beta NP_949893.1 5138946 D 258594 CDS NP_949894.1 39937618 2689074 5139835..5140566 1 NC_005296.1 IclR family transcriptional regulator 5140566 2689074 RPA4560 Rhodopseudomonas palustris CGA009 IclR family transcriptional regulator NP_949894.1 5139835 D 258594 CDS NP_949895.1 39937619 2690573 complement(5140697..5141761) 1 NC_005296.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 5141761 2690573 RPA4561 Rhodopseudomonas palustris CGA009 guanosine 5'-monophosphate oxidoreductase NP_949895.1 5140697 R 258594 CDS NP_949896.1 39937620 2690595 5141828..5142733 1 NC_005296.1 2-dehydropantoate 2-reductase 5142733 apbA/panE 2690595 apbA/panE Rhodopseudomonas palustris CGA009 2-dehydropantoate 2-reductase NP_949896.1 5141828 D 258594 CDS NP_949897.1 39937621 2690594 complement(5142735..5143484) 1 NC_005296.1 nuclease 5143484 exoI2 2690594 exoI2 Rhodopseudomonas palustris CGA009 nuclease NP_949897.1 5142735 R 258594 CDS NP_949898.1 39937622 2690609 5143612..5144526 1 NC_005296.1 phenylacetic acid degradation-like protein 5144526 2690609 RPA4564 Rhodopseudomonas palustris CGA009 phenylacetic acid degradation-like protein NP_949898.1 5143612 D 258594 CDS NP_949899.1 39937623 2690614 5144704..5145906 1 NC_005296.1 diguanylate cyclase 5145906 2690614 RPA4565 Rhodopseudomonas palustris CGA009 diguanylate cyclase NP_949899.1 5144704 D 258594 CDS NP_949900.1 39937624 2690622 complement(5145907..5147103) 1 NC_005296.1 acetate kinase 5147103 ackA 2690622 ackA Rhodopseudomonas palustris CGA009 acetate kinase NP_949900.1 5145907 R 258594 CDS NP_949901.1 39937625 2692971 complement(5147100..5148515) 1 NC_005296.1 Catalyses the synthesis of acetylphosphate from acetyl-CoA and inorganic phosphate; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 5148515 pta 2692971 pta Rhodopseudomonas palustris CGA009 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase NP_949901.1 5147100 R 258594 CDS NP_949902.1 39937626 2691140 complement(5148539..5149300) 1 NC_005296.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 5149300 2691140 RPA4568 Rhodopseudomonas palustris CGA009 enoyl-ACP reductase NP_949902.1 5148539 R 258594 CDS NP_949903.1 39937627 2692973 complement(5149383..5150252) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5150252 2692973 RPA4569 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949903.1 5149383 R 258594 CDS NP_949904.1 39937628 2692970 5150634..5152016 1 NC_005296.1 hypothetical protein 5152016 2692970 RPA4570 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949904.1 5150634 D 258594 CDS NP_949905.1 39937629 2688744 complement(5152095..5152499) 1 NC_005296.1 hypothetical protein 5152499 2688744 RPA4571 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949905.1 5152095 R 258594 CDS NP_949906.1 39937630 2691047 complement(5152730..5154292) 1 NC_005296.1 serine protease 5154292 htrA/degQ/degS 2691047 htrA/degQ/degS Rhodopseudomonas palustris CGA009 serine protease NP_949906.1 5152730 R 258594 CDS NP_949907.1 39937631 2691045 complement(5154547..5155035) 1 NC_005296.1 hypothetical protein 5155035 2691045 RPA4573 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949907.1 5154547 R 258594 CDS NP_949908.1 39937632 2692772 complement(5155144..5155428) 1 NC_005296.1 hypothetical protein 5155428 2692772 RPA4574 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949908.1 5155144 R 258594 CDS NP_949909.1 39937633 2692964 5155586..5157151 1 NC_005296.1 sugar ABC transporter ATP-binding protein 5157151 2692964 RPA4575 Rhodopseudomonas palustris CGA009 sugar ABC transporter ATP-binding protein NP_949909.1 5155586 D 258594 CDS NP_949910.1 39937634 2691891 5157135..5158226 1 NC_005296.1 sugar ABC transporter permease 5158226 2691891 RPA4576 Rhodopseudomonas palustris CGA009 sugar ABC transporter permease NP_949910.1 5157135 D 258594 CDS NP_949911.1 39937635 2692797 5158213..5159130 1 NC_005296.1 sugar ABC transporter permease 5159130 2692797 RPA4577 Rhodopseudomonas palustris CGA009 sugar ABC transporter permease NP_949911.1 5158213 D 258594 CDS NP_949912.1 39937636 2691044 5159212..5160309 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; basic membrane lipoprotein 5160309 2691044 RPA4578 Rhodopseudomonas palustris CGA009 basic membrane lipoprotein NP_949912.1 5159212 D 258594 CDS NP_949913.1 39937637 2691889 complement(5160505..5161548) 1 NC_005296.1 PDZ/DHR/GLGF domain-containing protein 5161548 2691889 RPA4579 Rhodopseudomonas palustris CGA009 PDZ/DHR/GLGF domain-containing protein NP_949913.1 5160505 R 258594 CDS NP_949914.1 39937638 2691129 complement(5161590..5162597) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5162597 2691129 RPA4580 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949914.1 5161590 R 258594 CDS NP_949915.1 39937639 2691887 5162843..5164102 1 NC_005296.1 hypothetical protein 5164102 2691887 RPA4581 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949915.1 5162843 D 258594 CDS NP_949916.1 39937640 2689071 5164133..5165116 1 NC_005296.1 UDP-galactose 4-epimerase 5165116 galE2 2689071 galE2 Rhodopseudomonas palustris CGA009 UDP-galactose 4-epimerase NP_949916.1 5164133 D 258594 CDS NP_949917.1 39937641 2691778 5165344..5166261 1 NC_005296.1 UDP-N-acetyl-D-mannosamine transferase 5166261 2691778 RPA4583 Rhodopseudomonas palustris CGA009 UDP-N-acetyl-D-mannosamine transferase NP_949917.1 5165344 D 258594 CDS NP_949918.1 39937642 2691877 complement(5166277..5167413) 1 NC_005296.1 endoglucanase 5167413 2691877 RPA4584 Rhodopseudomonas palustris CGA009 endoglucanase NP_949918.1 5166277 R 258594 CDS NP_949919.1 39937643 2691880 complement(5167429..5169585) 1 NC_005296.1 lipopolysaccharide biosynthesis protein 5169585 2691880 RPA4585 Rhodopseudomonas palustris CGA009 lipopolysaccharide biosynthesis protein NP_949919.1 5167429 R 258594 CDS NP_949920.1 39937644 2691868 5169889..5171088 1 NC_005296.1 group 2 glycosyl transferase 5171088 2691868 RPA4586 Rhodopseudomonas palustris CGA009 group 2 glycosyl transferase NP_949920.1 5169889 D 258594 CDS NP_949921.1 39937645 2691875 5171110..5172639 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5172639 2691875 RPA4587 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949921.1 5171110 D 258594 CDS NP_949922.1 39937646 2691874 complement(5172657..5173022) 1 NC_005296.1 hypothetical protein 5173022 2691874 RPA4588 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949922.1 5172657 R 258594 CDS NP_949923.1 39937647 2691797 5173165..5174634 1 NC_005296.1 O-antigen export protein 5174634 2691797 RPA4589 Rhodopseudomonas palustris CGA009 O-antigen export protein NP_949923.1 5173165 D 258594 CDS NP_949924.1 39937648 2691252 complement(5174703..5175704) 1 NC_005296.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 5175704 2691252 RPA4590 Rhodopseudomonas palustris CGA009 homoserine O-succinyltransferase NP_949924.1 5174703 R 258594 CDS NP_949925.1 39937649 2690825 complement(5175717..5177021) 1 NC_005296.1 homocysteine synthase 5177021 metY 2690825 metY Rhodopseudomonas palustris CGA009 homocysteine synthase NP_949925.1 5175717 R 258594 CDS NP_949926.1 39937650 2690826 5177281..5179104 1 NC_005296.1 activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase 5179104 2690826 RPA4592 Rhodopseudomonas palustris CGA009 long-chain-acyl-CoA synthetase NP_949926.1 5177281 D 258594 CDS NP_949927.1 39937651 2691780 5179104..5179988 1 NC_005296.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; aminotransferase 5179988 2691780 RPA4593 Rhodopseudomonas palustris CGA009 aminotransferase NP_949927.1 5179104 D 258594 CDS NP_949928.1 39937652 2691774 complement(5180009..5180893) 1 NC_005296.1 hypothetical protein 5180893 2691774 RPA4594 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949928.1 5180009 R 258594 CDS NP_949929.1 39937653 2691768 5181226..5182605 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5182605 2691768 RPA4595 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949929.1 5181226 D 258594 CDS NP_949930.1 39937654 2691771 5182598..5183329 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 3-oxoacyl-ACP reductase 5183329 fabG5 2691771 fabG5 Rhodopseudomonas palustris CGA009 3-oxoacyl-ACP reductase NP_949930.1 5182598 D 258594 CDS NP_949931.1 39937655 2690992 complement(5183551..5184492) 1 NC_005296.1 hypothetical protein 5184492 2690992 RPA4597 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949931.1 5183551 R 258594 CDS NP_949932.1 39937656 2690987 complement(5184527..5185756) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 5185756 2690987 RPA4598 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_949932.1 5184527 R 258594 CDS NP_949933.1 39937657 2690983 5186123..5186395 1 NC_005296.1 hypothetical protein 5186395 2690983 RPA4599 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949933.1 5186123 D 258594 CDS NP_949934.1 39937658 2690964 5186469..5186924 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5186924 2690964 RPA4600 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949934.1 5186469 D 258594 CDS NP_949935.1 39937659 2692382 5187101..5187688 1 NC_005296.1 hypothetical protein 5187688 2692382 RPA4601 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949935.1 5187101 D 258594 CDS NP_949936.1 39937660 2692374 complement(5188040..5188336) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ferredoxin like protein fixX 5188336 fixX 2692374 fixX Rhodopseudomonas palustris CGA009 ferredoxin like protein fixX NP_949936.1 5188040 R 258594 CDS NP_949937.1 39937661 2692368 complement(5188370..5189677) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; electron-transferring-flavoprotein dehydrogenase 5189677 fixC 2692368 fixC Rhodopseudomonas palustris CGA009 electron-transferring-flavoprotein dehydrogenase NP_949937.1 5188370 R 258594 CDS NP_949938.1 39937662 2688752 complement(5189690..5190796) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; electron transfer flavoprotein subunit beta 5190796 fixB 2688752 fixB Rhodopseudomonas palustris CGA009 electron transfer flavoprotein subunit beta NP_949938.1 5189690 R 258594 CDS NP_949939.1 39937663 2689134 complement(5190821..5191666) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; electron transfer flavoprotein subunit beta 5191666 fixA 2689134 fixA Rhodopseudomonas palustris CGA009 electron transfer flavoprotein subunit beta NP_949939.1 5190821 R 258594 CDS NP_949940.1 39937664 2692523 complement(5191999..5192349) 1 NC_005296.1 associates with NifD and may protect the nitrogenase Fe-Mo protein from oxidative damage; nitrogenase stabilizing/protective protein 5192349 nifW 2692523 nifW Rhodopseudomonas palustris CGA009 nitrogenase stabilizing/protective protein NP_949940.1 5191999 R 258594 CDS NP_949941.1 39937665 2692526 complement(5192378..5193571) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; homocitrate synthase 5193571 nifV 2692526 nifV Rhodopseudomonas palustris CGA009 homocitrate synthase NP_949941.1 5192378 R 258594 CDS NP_949942.1 39937666 2692360 complement(5193564..5194796) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; class V aminotransferase 5194796 nifS2 2692360 nifS2 Rhodopseudomonas palustris CGA009 class V aminotransferase NP_949942.1 5193564 R 258594 CDS NP_949943.1 39937667 2692358 complement(5194793..5195779) 1 NC_005296.1 NifU protein 5195779 nifU 2692358 nifU Rhodopseudomonas palustris CGA009 NifU protein NP_949943.1 5194793 R 258594 CDS NP_949944.1 39937668 2690883 complement(5195807..5196127) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; HesB/YadR/YfhF 5196127 2690883 RPA4610 Rhodopseudomonas palustris CGA009 HesB/YadR/YfhF NP_949944.1 5195807 R 258594 CDS NP_949945.1 39937669 2692349 complement(5196535..5197245) 1 NC_005296.1 nitrogen fixation protein NifQ 5197245 nifQ 2692349 nifQ Rhodopseudomonas palustris CGA009 nitrogen fixation protein NifQ NP_949945.1 5196535 R 258594 CDS NP_949946.1 39937670 2688792 complement(5197263..5197574) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 4Fe-4S ferredoxin 5197574 fdxB 2688792 fdxB Rhodopseudomonas palustris CGA009 4Fe-4S ferredoxin NP_949946.1 5197263 R 258594 CDS NP_949947.1 39937671 2691851 complement(5197635..5197841) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5197841 2691851 RPA4613 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949947.1 5197635 R 258594 CDS NP_949948.1 39937672 2691856 complement(5197860..5198324) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5198324 2691856 RPA4614 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949948.1 5197860 R 258594 CDS NP_949949.1 39937673 2689149 complement(5198326..5198724) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; dinitrogenase iron-molybdenum cofactor biosynthesis 5198724 nifX 2689149 nifX Rhodopseudomonas palustris CGA009 dinitrogenase iron-molybdenum cofactor biosynthesis NP_949949.1 5198326 R 258594 CDS NP_949950.1 39937674 2692347 complement(5198780..5200153) 1 NC_005296.1 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 5200153 nifN 2692347 nifN Rhodopseudomonas palustris CGA009 nitrogenase molybdenum-cofactor biosynthesis protein NifN NP_949950.1 5198780 R 258594 CDS NP_949951.1 39937675 2692345 complement(5200164..5201627) 1 NC_005296.1 functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifE 5201627 nifE 2692345 nifE Rhodopseudomonas palustris CGA009 nitrogenase molybdenum-cofactor biosynthesis protein NifE NP_949951.1 5200164 R 258594 CDS NP_949952.1 39937676 2692339 complement(5201667..5203226) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitrogenase molybdenum-iron protein subunit beta 5203226 nifK 2692339 nifK Rhodopseudomonas palustris CGA009 nitrogenase molybdenum-iron protein subunit beta NP_949952.1 5201667 R 258594 CDS NP_949953.1 39937677 2690565 complement(5203315..5204778) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitrogenase molybdenum-iron protein subunit alpha 5204778 nifD 2690565 nifD Rhodopseudomonas palustris CGA009 nitrogenase molybdenum-iron protein subunit alpha NP_949953.1 5203315 R 258594 CDS NP_949954.1 39937678 2690566 complement(5204850..5205746) 1 NC_005296.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 5205746 nifH 2690566 nifH Rhodopseudomonas palustris CGA009 nitrogenase reductase NP_949954.1 5204850 R 258594 CDS NP_949955.1 39937679 2690890 complement(5206323..5207225) 1 NC_005296.1 hypothetical protein 5207225 2690890 RPA4621 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949955.1 5206323 R 258594 CDS NP_949956.1 39937680 2690563 complement(5207241..5207519) 1 NC_005296.1 hypothetical protein 5207519 2690563 RPA4622 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949956.1 5207241 R 258594 CDS NP_949957.1 39937681 2690552 complement(5207522..5207722) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5207722 fixU 2690552 fixU Rhodopseudomonas palustris CGA009 hypothetical protein NP_949957.1 5207522 R 258594 CDS NP_949958.1 39937682 2690546 complement(5207760..5207993) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5207993 2690546 RPA4624 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949958.1 5207760 R 258594 CDS NP_949959.1 39937683 2690543 complement(5207993..5208292) 1 NC_005296.1 nitrogen fixation protein NifZ 5208292 nifZ 2690543 nifZ Rhodopseudomonas palustris CGA009 nitrogen fixation protein NifZ NP_949959.1 5207993 R 258594 CDS NP_949960.1 39937684 2690542 complement(5208289..5209074) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5209074 2690542 RPA4626 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949960.1 5208289 R 258594 CDS NP_949961.1 39937685 2689844 complement(5209064..5209603) 1 NC_005296.1 hypothetical protein 5209603 2689844 RPA4627 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949961.1 5209064 R 258594 CDS NP_949962.1 39937686 2690541 complement(5209607..5209963) 1 NC_005296.1 HesB/YadR/YfhF 5209963 hesB 2690541 hesB Rhodopseudomonas palustris CGA009 HesB/YadR/YfhF NP_949962.1 5209607 R 258594 CDS NP_949963.1 39937687 2690970 complement(5209974..5210195) 1 NC_005296.1 4Fe-4S ferredoxin 5210195 ferN 2690970 ferN Rhodopseudomonas palustris CGA009 4Fe-4S ferredoxin NP_949963.1 5209974 R 258594 CDS NP_949964.1 39937688 2690976 complement(5210219..5211775) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; nitrogenase cofactor biosynthesis protein NifB 5211775 nifB 2690976 nifB Rhodopseudomonas palustris CGA009 nitrogenase cofactor biosynthesis protein NifB NP_949964.1 5210219 R 258594 CDS NP_949965.1 39937689 2690636 complement(5211934..5212128) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 4Fe-4S ferredoxin 5212128 fer1 2690636 fer1 Rhodopseudomonas palustris CGA009 4Fe-4S ferredoxin NP_949965.1 5211934 R 258594 CDS NP_949966.1 39937690 2690641 complement(5212401..5214155) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; transcriptional regulator NifA 5214155 nifA 2690641 nifA Rhodopseudomonas palustris CGA009 transcriptional regulator NifA NP_949966.1 5212401 R 258594 CDS NP_949967.1 39937691 2692338 complement(5214468..5215364) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase 5215364 fixR2 2692338 fixR2 Rhodopseudomonas palustris CGA009 short-chain dehydrogenase NP_949967.1 5214468 R 258594 CDS NP_949968.1 39937692 2689165 5215621..5216475 1 NC_005296.1 hypothetical protein 5216475 2689165 RPA4634 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949968.1 5215621 D 258594 CDS NP_949969.1 39937693 2691243 complement(5216625..5218511) 1 NC_005296.1 ferrous iron transport protein B 5218511 feoB 2691243 feoB Rhodopseudomonas palustris CGA009 ferrous iron transport protein B NP_949969.1 5216625 R 258594 CDS NP_949970.1 39937694 2691234 complement(5218549..5218839) 1 NC_005296.1 FeoA family protein 5218839 2691234 RPA4636 Rhodopseudomonas palustris CGA009 FeoA family protein NP_949970.1 5218549 R 258594 CDS NP_949971.1 39937695 2691231 5219202..5219363 1 NC_005296.1 hypothetical protein 5219363 2691231 RPA4637 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949971.1 5219202 D 258594 CDS NP_949972.1 39937696 2691211 complement(5219533..5221230) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 5221230 2691211 RPA4638 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_949972.1 5219533 R 258594 CDS NP_949973.1 39937697 2691200 complement(5221609..5223303) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 5223303 2691200 RPA4639 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_949973.1 5221609 R 258594 CDS NP_949974.1 39937698 2692540 complement(5223509..5223895) 1 NC_005296.1 hypothetical protein 5223895 2692540 RPA4640 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949974.1 5223509 R 258594 CDS NP_949975.1 39937699 2692140 complement(5224192..5225577) 1 NC_005296.1 catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation; ribulose bisphosphate carboxylase 5225577 cbbM 2692140 cbbM Rhodopseudomonas palustris CGA009 ribulose bisphosphate carboxylase NP_949975.1 5224192 R 258594 CDS NP_949976.1 39937700 2692136 complement(5225636..5226721) 1 NC_005296.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 5226721 cbbA 2692136 cbbA Rhodopseudomonas palustris CGA009 fructose-1,6-bisphosphate aldolase NP_949976.1 5225636 R 258594 CDS NP_949977.1 39937701 2692130 complement(5226783..5228750) 1 NC_005296.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 5228750 cbbT1 2692130 cbbT1 Rhodopseudomonas palustris CGA009 transketolase NP_949977.1 5226783 R 258594 CDS NP_949978.1 39937702 2692128 complement(5228833..5229708) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphoribulokinase 5229708 cbbP 2692128 cbbP Rhodopseudomonas palustris CGA009 phosphoribulokinase NP_949978.1 5228833 R 258594 CDS NP_949979.1 39937703 2689950 complement(5229746..5230777) 1 NC_005296.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 5230777 cbbF 2689950 cbbF Rhodopseudomonas palustris CGA009 fructose-1,6-bisphosphatase NP_949979.1 5229746 R 258594 CDS NP_949980.1 39937704 2692096 5231249..5231998 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carboxylesterase 5231998 2692096 RPA4646 Rhodopseudomonas palustris CGA009 carboxylesterase NP_949980.1 5231249 D 258594 CDS NP_949981.1 39937705 2692103 complement(5232127..5232882) 1 NC_005296.1 IclR family transcriptional regulator 5232882 kdgR 2692103 kdgR Rhodopseudomonas palustris CGA009 IclR family transcriptional regulator NP_949981.1 5232127 R 258594 CDS NP_949982.1 39937706 2692100 complement(5232963..5234051) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter 5234051 2692100 RPA4648 Rhodopseudomonas palustris CGA009 ABC transporter NP_949982.1 5232963 R 258594 CDS NP_949983.1 39937707 2692081 complement(5234085..5235878) 1 NC_005296.1 ABC transporter permease 5235878 2692081 RPA4649 Rhodopseudomonas palustris CGA009 ABC transporter permease NP_949983.1 5234085 R 258594 CDS NP_949984.1 39937708 2692074 complement(5235875..5237020) 1 NC_005296.1 spermidine/putrescine transport system ATP-binding protein 5237020 potA 2692074 potA Rhodopseudomonas palustris CGA009 spermidine/putrescine transport system ATP-binding protein NP_949984.1 5235875 R 258594 CDS NP_949985.1 39937709 2692070 5237135..5238082 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; glutaconate CoA transferase subunit A 5238082 2692070 RPA4651 Rhodopseudomonas palustris CGA009 glutaconate CoA transferase subunit A NP_949985.1 5237135 D 258594 CDS NP_949986.1 39937710 2692552 5238082..5238849 1 NC_005296.1 CoA transferase subunit B 5238849 2692552 RPA4652 Rhodopseudomonas palustris CGA009 CoA transferase subunit B NP_949986.1 5238082 D 258594 CDS NP_949987.1 39937711 2692047 5238882..5241191 1 NC_005296.1 biotin sulfoxide reductase 5241191 bisC 2692047 bisC Rhodopseudomonas palustris CGA009 biotin sulfoxide reductase NP_949987.1 5238882 D 258594 CDS NP_949988.1 39937712 2692055 5241208..5241777 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5241777 2692055 RPA4654 Rhodopseudomonas palustris CGA009 hypothetical protein NP_949988.1 5241208 D 258594 CDS NP_949989.1 39937713 2692029 5241859..5242545 1 NC_005296.1 L-fuculose phosphate aldolase 5242545 fucA 2692029 fucA Rhodopseudomonas palustris CGA009 L-fuculose phosphate aldolase NP_949989.1 5241859 D 258594 CDS NP_949990.1 39937714 2692014 5242576..5243535 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; sugar kinase 5243535 2692014 RPA4656 Rhodopseudomonas palustris CGA009 sugar kinase NP_949990.1 5242576 D 258594 CDS NP_949991.1 39937715 2692005 5243582..5244328 1 NC_005296.1 2-keto-3-deoxygluconate dehydrogenase 5244328 kduD 2692005 kduD Rhodopseudomonas palustris CGA009 2-keto-3-deoxygluconate dehydrogenase NP_949991.1 5243582 D 258594 CDS NP_949992.1 39937716 2692006 5244361..5245347 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; zinc-binding dehydrogenase 5245347 2692006 RPA4658 Rhodopseudomonas palustris CGA009 zinc-binding dehydrogenase NP_949992.1 5244361 D 258594 CDS NP_949993.1 39937717 2691990 5245424..5245927 1 NC_005296.1 acetyltransferase 5245927 2691990 RPA4659 Rhodopseudomonas palustris CGA009 acetyltransferase NP_949993.1 5245424 D 258594 CDS NP_949994.1 39937718 2690001 complement(5252629..5254110) 1 NC_005296.1 alpha,alpha-trehalose-phosphate synthase 5254110 otsA 2690001 otsA Rhodopseudomonas palustris CGA009 alpha,alpha-trehalose-phosphate synthase NP_949994.1 5252629 R 258594 CDS NP_949995.1 39937719 2689971 complement(5254267..5255064) 1 NC_005296.1 trehalose-6-phosphate phophatase 5255064 otsB 2689971 otsB Rhodopseudomonas palustris CGA009 trehalose-6-phosphate phophatase NP_949995.1 5254267 R 258594 CDS NP_949996.1 39937720 2690706 complement(5255061..5256548) 1 NC_005296.1 major facilitator transporter 5256548 2690706 RPA4662 Rhodopseudomonas palustris CGA009 major facilitator transporter NP_949996.1 5255061 R 258594 CDS NP_949997.1 39937721 2689848 complement(5256729..5258771) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis sensory transducer 5258771 2689848 RPA4663 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis sensory transducer NP_949997.1 5256729 R 258594 CDS NP_949998.1 39937722 2689709 complement(5258890..5259636) 1 NC_005296.1 cupin 5259636 2689709 RPA4664 Rhodopseudomonas palustris CGA009 cupin NP_949998.1 5258890 R 258594 CDS NP_949999.1 39937723 2689573 5259974..5261635 1 NC_005296.1 2-isopropylmalate synthase 5261635 leuA 2689573 leuA Rhodopseudomonas palustris CGA009 2-isopropylmalate synthase NP_949999.1 5259974 D 258594 CDS NP_950000.1 39937724 2689569 5261956..5262426 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbon-monoxide dehydrogenase small subunit 5262426 coxS 2689569 coxS Rhodopseudomonas palustris CGA009 carbon-monoxide dehydrogenase small subunit NP_950000.1 5261956 D 258594 CDS NP_950001.1 39937725 2689558 5262537..5264891 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbon-monoxide dehydrogenase large subunit 5264891 coxL 2689558 coxL Rhodopseudomonas palustris CGA009 carbon-monoxide dehydrogenase large subunit NP_950001.1 5262537 D 258594 CDS NP_950002.1 39937726 2689538 5265000..5265800 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; carbon monoxide dehydrogenase subunit C 5265800 coxM 2689538 coxM Rhodopseudomonas palustris CGA009 carbon monoxide dehydrogenase subunit C NP_950002.1 5265000 D 258594 CDS NP_950003.1 39937727 2692304 5265985..5267100 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; L-carnitine dehydratase/bile acid-inducible protein F 5267100 2692304 RPA4669 Rhodopseudomonas palustris CGA009 L-carnitine dehydratase/bile acid-inducible protein F NP_950003.1 5265985 D 258594 CDS NP_950004.1 39937728 2692309 complement(5267227..5268492) 1 NC_005296.1 fumarylacetoacetase 5268492 fahA 2692309 fahA Rhodopseudomonas palustris CGA009 fumarylacetoacetase NP_950004.1 5267227 R 258594 CDS NP_950005.1 39937729 2692306 complement(5268784..5269440) 1 NC_005296.1 maleylacetoacetate isomerase 5269440 maiA 2692306 maiA Rhodopseudomonas palustris CGA009 maleylacetoacetate isomerase NP_950005.1 5268784 R 258594 CDS NP_950006.1 39937730 2692302 complement(5269437..5270783) 1 NC_005296.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 5270783 hmgA 2692302 hmgA Rhodopseudomonas palustris CGA009 homogentisate 1,2-dioxygenase NP_950006.1 5269437 R 258594 CDS NP_950007.1 39937731 2691000 complement(5270840..5271793) 1 NC_005296.1 beta lactamase 5271793 cphA1 2691000 cphA1 Rhodopseudomonas palustris CGA009 beta lactamase NP_950007.1 5270840 R 258594 CDS NP_950008.1 39937732 2693076 complement(5272020..5272238) 1 NC_005296.1 hypothetical protein 5272238 2693076 RPA4674 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950008.1 5272020 R 258594 CDS NP_950009.1 39937733 2693081 complement(5272528..5274135) 1 NC_005296.1 FAD-dependent oxidoreductase 5274135 2693081 RPA4675 Rhodopseudomonas palustris CGA009 FAD-dependent oxidoreductase NP_950009.1 5272528 R 258594 CDS NP_950010.1 39937734 2689554 5274265..5274762 1 NC_005296.1 MarR family transcriptional regulator 5274762 2689554 RPA4676 Rhodopseudomonas palustris CGA009 MarR family transcriptional regulator NP_950010.1 5274265 D 258594 CDS NP_950011.1 39937735 2692293 5274933..5276363 1 NC_005296.1 TPR repeat-containing caspace 5276363 2692293 RPA4677 Rhodopseudomonas palustris CGA009 TPR repeat-containing caspace NP_950011.1 5274933 D 258594 CDS NP_950012.1 39937736 2692292 5276468..5277118 1 NC_005296.1 outer membrane protein OprF 5277118 2692292 RPA4678 Rhodopseudomonas palustris CGA009 outer membrane protein OprF NP_950012.1 5276468 D 258594 CDS NP_950013.1 39937737 2693060 5277277..5278164 1 NC_005296.1 component of multidrug efflux system 5278164 2693060 RPA4679 Rhodopseudomonas palustris CGA009 component of multidrug efflux system NP_950013.1 5277277 D 258594 CDS NP_950014.1 39937738 2692285 5278164..5281316 1 NC_005296.1 efflux transporter 5281316 2692285 RPA4680 Rhodopseudomonas palustris CGA009 efflux transporter NP_950014.1 5278164 D 258594 CDS NP_950015.1 39937739 2692272 5281358..5283175 1 NC_005296.1 AsmA family protein 5283175 2692272 RPA4681 Rhodopseudomonas palustris CGA009 AsmA family protein NP_950015.1 5281358 D 258594 CDS NP_950016.1 39937740 2693061 5283182..5284153 1 NC_005296.1 RND efflux membrane fusion protein 5284153 2693061 RPA4682 Rhodopseudomonas palustris CGA009 RND efflux membrane fusion protein NP_950016.1 5283182 D 258594 CDS NP_950017.1 39937741 2691896 complement(5284215..5284469) 1 NC_005296.1 hypothetical protein 5284469 2691896 RPA4683 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950017.1 5284215 R 258594 CDS NP_950018.1 39937742 2689777 5285027..5286706 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 5286706 2689777 RPA4684 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_950018.1 5285027 D 258594 CDS NP_950019.1 39937743 2693035 complement(5286747..5288384) 1 NC_005296.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 5288384 lysK 2693035 lysK Rhodopseudomonas palustris CGA009 lysyl-tRNA synthetase NP_950019.1 5286747 R 258594 CDS NP_950020.1 39937744 2690739 complement(5288418..5289173) 1 NC_005296.1 family 3 extracellular solute-binding protein 5289173 2690739 RPA4686 Rhodopseudomonas palustris CGA009 family 3 extracellular solute-binding protein NP_950020.1 5288418 R 258594 CDS NP_950021.1 39937745 2690634 5289415..5291466 1 NC_005296.1 glycosyl transferase family protein 5291466 2690634 RPA4687 Rhodopseudomonas palustris CGA009 glycosyl transferase family protein NP_950021.1 5289415 D 258594 CDS NP_950022.1 39937746 2691724 complement(5291468..5292067) 1 NC_005296.1 electron transport protein SCO1/SenC 5292067 2691724 RPA4688 Rhodopseudomonas palustris CGA009 electron transport protein SCO1/SenC NP_950022.1 5291468 R 258594 CDS NP_950023.1 39937747 2692239 complement(5292243..5292701) 1 NC_005296.1 hypothetical protein 5292701 2692239 RPA4689 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950023.1 5292243 R 258594 CDS NP_950024.1 39937748 2692959 5292915..5293253 1 NC_005296.1 hypothetical protein 5293253 2692959 RPA4690 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950024.1 5292915 D 258594 CDS NP_950025.1 39937749 2692958 5293431..5295401 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; methyl-accepting chemotaxis receptor/sensory transducer 5295401 2692958 RPA4691 Rhodopseudomonas palustris CGA009 methyl-accepting chemotaxis receptor/sensory transducer NP_950025.1 5293431 D 258594 CDS NP_950026.1 39937750 2692948 5295550..5295927 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5295927 2692948 RPA4692 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950026.1 5295550 D 258594 CDS NP_950027.1 39937751 2692941 complement(5296118..5297281) 1 NC_005296.1 FMN oxidoreductase 5297281 2692941 RPA4693 Rhodopseudomonas palustris CGA009 FMN oxidoreductase NP_950027.1 5296118 R 258594 CDS NP_950028.1 39937752 2690517 5297448..5298446 1 NC_005296.1 hypothetical protein 5298446 2690517 RPA4694 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950028.1 5297448 D 258594 CDS NP_950029.1 39937753 2690507 5298468..5299370 1 NC_005296.1 LysR family transcriptional regulator 5299370 ligR 2690507 ligR Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_950029.1 5298468 D 258594 CDS NP_950030.1 39937754 2692934 5299497..5300615 1 NC_005296.1 hypothetical protein 5300615 FldA 2692934 FldA Rhodopseudomonas palustris CGA009 hypothetical protein NP_950030.1 5299497 D 258594 CDS NP_950031.1 39937755 2691710 5300785..5301813 1 NC_005296.1 4-oxalomesaconate hydratase 5301813 ligJ 2691710 ligJ Rhodopseudomonas palustris CGA009 4-oxalomesaconate hydratase NP_950031.1 5300785 D 258594 CDS NP_950032.1 39937756 2693024 5301816..5302511 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5302511 FldZ 2693024 FldZ Rhodopseudomonas palustris CGA009 hypothetical protein NP_950032.1 5301816 D 258594 CDS NP_950033.1 39937757 2692244 5302511..5303440 1 NC_005296.1 dehydrogenase 5303440 FldX 2692244 FldX Rhodopseudomonas palustris CGA009 dehydrogenase NP_950033.1 5302511 D 258594 CDS NP_950034.1 39937758 2690909 5303694..5304608 1 NC_005296.1 2-pyrone-4,6-dicarboxylic acid hydrolase 5304608 ligI 2690909 ligI Rhodopseudomonas palustris CGA009 2-pyrone-4,6-dicarboxylic acid hydrolase NP_950034.1 5303694 D 258594 CDS NP_950035.1 39937759 2690913 5304715..5305104 1 NC_005296.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit alpha 5305104 ligA 2690913 ligA Rhodopseudomonas palustris CGA009 protocatechuate 4,5-dioxygenase subunit alpha NP_950035.1 5304715 D 258594 CDS NP_950036.1 39937760 2690473 5305104..5305958 1 NC_005296.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit beta 5305958 ligB 2690473 ligB Rhodopseudomonas palustris CGA009 protocatechuate 4,5-dioxygenase subunit beta NP_950036.1 5305104 D 258594 CDS NP_950037.1 39937761 2691708 5305960..5306919 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase 5306919 ligC 2691708 ligC Rhodopseudomonas palustris CGA009 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase NP_950037.1 5305960 D 258594 CDS NP_950038.1 39937762 2692226 5307112..5307510 1 NC_005296.1 hypothetical protein 5307510 2692226 RPA4704 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950038.1 5307112 D 258594 CDS NP_950039.1 39937763 2692212 5307616..5308011 1 NC_005296.1 phosphoribosyl-ATP pyrophosphohydrolase 5308011 hisE2 2692212 hisE2 Rhodopseudomonas palustris CGA009 phosphoribosyl-ATP pyrophosphohydrolase NP_950039.1 5307616 D 258594 CDS NP_950040.1 39937764 2690460 5308113..5308694 1 NC_005296.1 DedA family protein 5308694 2690460 RPA4706 Rhodopseudomonas palustris CGA009 DedA family protein NP_950040.1 5308113 D 258594 CDS NP_950041.1 39937765 2692218 5308747..5309424 1 NC_005296.1 hypothetical protein 5309424 2692218 RPA4707 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950041.1 5308747 D 258594 CDS NP_950042.1 39937766 2690823 5309570..5310538 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; 2-nitropropane dioxygenase 5310538 2690823 RPA4708 Rhodopseudomonas palustris CGA009 2-nitropropane dioxygenase NP_950042.1 5309570 D 258594 CDS NP_950043.1 39937767 2692598 5310696..5311469 1 NC_005296.1 hypothetical protein 5311469 2692598 RPA4709 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950043.1 5310696 D 258594 CDS NP_950044.1 39937768 2692181 5311592..5311912 1 NC_005296.1 hypothetical protein 5311912 2692181 RPA4710 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950044.1 5311592 D 258594 CDS NP_950045.1 39937769 2691808 5312066..5312764 1 NC_005296.1 hypothetical protein 5312764 2691808 RPA4711 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950045.1 5312066 D 258594 CDS NP_950046.1 39937770 2691836 complement(5312818..5314566) 1 NC_005296.1 hypothetical protein 5314566 2691836 RPA4712 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950046.1 5312818 R 258594 CDS NP_950047.1 39937771 2692170 5314811..5315782 1 NC_005296.1 hypothetical protein 5315782 2692170 RPA4713 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950047.1 5314811 D 258594 CDS NP_950048.1 39937772 2690437 complement(5315755..5316345) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5316345 2690437 RPA4714 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950048.1 5315755 R 258594 CDS NP_950049.1 39937773 2690415 complement(5316493..5317614) 1 NC_005296.1 molybdate ABC transporter ATP-binding protein 5317614 modC 2690415 modC Rhodopseudomonas palustris CGA009 molybdate ABC transporter ATP-binding protein NP_950049.1 5316493 R 258594 CDS NP_950050.1 39937774 2690414 complement(5317611..5318297) 1 NC_005296.1 molybdate ABC transporter permease 5318297 modB 2690414 modB Rhodopseudomonas palustris CGA009 molybdate ABC transporter permease NP_950050.1 5317611 R 258594 CDS NP_950051.1 39937775 2690410 complement(5318535..5319308) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; molybdenum ABC transporter periplasmic molybdate-binding protein 5319308 modA 2690410 modA Rhodopseudomonas palustris CGA009 molybdenum ABC transporter periplasmic molybdate-binding protein NP_950051.1 5318535 R 258594 CDS NP_950052.1 39937776 2690404 complement(5319453..5320244) 1 NC_005296.1 ModE family transcriptional regulator 5320244 modE 2690404 modE Rhodopseudomonas palustris CGA009 ModE family transcriptional regulator NP_950052.1 5319453 R 258594 CDS NP_950053.1 39937777 2691439 5320343..5320552 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; molybdo-pterin binding protein 5320552 2691439 RPA4719 Rhodopseudomonas palustris CGA009 molybdo-pterin binding protein NP_950053.1 5320343 D 258594 CDS NP_950054.1 39937778 2688959 complement(5320597..5321166) 1 NC_005296.1 hypothetical protein 5321166 2688959 RPA4720 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950054.1 5320597 R 258594 CDS NP_950055.1 39937779 2691590 5321423..5326636 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; pyruvate-flavodoxin oxidoreductase 5326636 2691590 RPA4721 Rhodopseudomonas palustris CGA009 pyruvate-flavodoxin oxidoreductase NP_950055.1 5321423 D 258594 CDS NP_950056.1 39937780 2691571 5326633..5329467 1 NC_005296.1 undetermined function; bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase 5329467 2691571 RPA4722 Rhodopseudomonas palustris CGA009 bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase NP_950056.1 5326633 D 258594 CDS NP_950057.1 39937781 2692164 5330466..5333543 1 NC_005296.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 5333543 polA 2692164 polA Rhodopseudomonas palustris CGA009 DNA polymerase I NP_950057.1 5330466 D 258594 CDS NP_950058.1 39937782 2692935 5333861..5334424 1 NC_005296.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 5334424 pyrE 2692935 pyrE Rhodopseudomonas palustris CGA009 orotate phosphoribosyltransferase NP_950058.1 5333861 D 258594 CDS NP_950059.1 39937783 2692151 5334527..5335330 1 NC_005296.1 hypothetical protein 5335330 2692151 RPA4725 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950059.1 5334527 D 258594 CDS NP_950060.1 39937784 2692904 complement(5335598..5336029) 1 NC_005296.1 hypothetical protein 5336029 2692904 RPA4726 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950060.1 5335598 R 258594 CDS NP_950061.1 39937785 2692896 5336312..5338858 1 NC_005296.1 glycogen/starch/alpha-glucan phosphorylase 5338858 glgA2 2692896 glgA2 Rhodopseudomonas palustris CGA009 glycogen/starch/alpha-glucan phosphorylase NP_950061.1 5336312 D 258594 CDS NP_950062.1 39937786 2692895 5339139..5339972 1 NC_005296.1 hypothetical protein 5339972 2692895 RPA4728 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950062.1 5339139 D 258594 CDS NP_950063.1 39937787 2692890 5340028..5341011 1 NC_005296.1 arginase 5341011 rocF 2692890 rocF Rhodopseudomonas palustris CGA009 arginase NP_950063.1 5340028 D 258594 CDS NP_950064.1 39937788 2692139 5341259..5342878 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter ATPase 5342878 2692139 RPA4730 Rhodopseudomonas palustris CGA009 ABC transporter ATPase NP_950064.1 5341259 D 258594 CDS NP_950065.1 39937789 2692147 complement(5343026..5344219) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5344219 2692147 RPA4731 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950065.1 5343026 R 258594 CDS NP_950066.1 39937790 2690401 5344380..5344958 1 NC_005296.1 ChaC-like protein 5344958 2690401 RPA4732 Rhodopseudomonas palustris CGA009 ChaC-like protein NP_950066.1 5344380 D 258594 CDS NP_950067.1 39937791 2690390 complement(5344975..5345784) 1 NC_005296.1 phospholipid/glycerol acyltransferase 5345784 plsC 2690390 plsC Rhodopseudomonas palustris CGA009 phospholipid/glycerol acyltransferase NP_950067.1 5344975 R 258594 CDS NP_950068.1 39937792 2690362 complement(5345798..5346565) 1 NC_005296.1 hypothetical protein 5346565 2690362 RPA4734 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950068.1 5345798 R 258594 CDS NP_950069.1 39937793 2690346 complement(5346668..5347444) 1 NC_005296.1 hypothetical protein 5347444 2690346 RPA4735 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950069.1 5346668 R 258594 CDS NP_950070.1 39937794 2692880 complement(5347658..5348317) 1 NC_005296.1 cell division ATP-binding protein FtsE 5348317 ftsE 2692880 ftsE Rhodopseudomonas palustris CGA009 cell division ATP-binding protein FtsE NP_950070.1 5347658 R 258594 CDS NP_950071.1 39937795 2692874 5348461..5349357 1 NC_005296.1 Zinc finger/thioredoxin 5349357 2692874 RPA4737 Rhodopseudomonas palustris CGA009 Zinc finger/thioredoxin NP_950071.1 5348461 D 258594 CDS NP_950072.1 39937796 2692850 5349417..5349797 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; chemotaxis protein CheY 5349797 2692850 RPA4738 Rhodopseudomonas palustris CGA009 chemotaxis protein CheY NP_950072.1 5349417 D 258594 CDS NP_950073.1 39937797 2692844 complement(5349996..5352557) 1 NC_005296.1 hypothetical protein 5352557 2692844 RPA4739 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950073.1 5349996 R 258594 CDS NP_950074.1 39937798 2692820 5352717..5353097 1 NC_005296.1 4-carboxymuconolactone decarboxylase 5353097 pcaC 2692820 pcaC Rhodopseudomonas palustris CGA009 4-carboxymuconolactone decarboxylase NP_950074.1 5352717 D 258594 CDS NP_950075.1 39937799 2692801 complement(5353332..5354597) 1 NC_005296.1 diaminopimelate decarboxylase 5354597 lysA 2692801 lysA Rhodopseudomonas palustris CGA009 diaminopimelate decarboxylase NP_950075.1 5353332 R 258594 CDS NP_950076.1 39937800 2692800 complement(5354606..5354887) 1 NC_005296.1 hypothetical protein 5354887 2692800 RPA4742 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950076.1 5354606 R 258594 CDS NP_950077.1 39937801 2691182 complement(5354942..5356339) 1 NC_005296.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 5356339 argH 2691182 argH Rhodopseudomonas palustris CGA009 argininosuccinate lyase NP_950077.1 5354942 R 258594 CDS NP_950078.1 39937802 2691179 5356435..5357121 1 NC_005296.1 thioredoxin-like protein 5357121 2691179 RPA4744 Rhodopseudomonas palustris CGA009 thioredoxin-like protein NP_950078.1 5356435 D 258594 CDS NP_950079.1 39937803 2689750 complement(5357277..5357507) 1 NC_005296.1 hypothetical protein 5357507 2689750 RPA4745 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950079.1 5357277 R 258594 CDS NP_950080.1 39937804 2690345 complement(5357574..5358392) 1 NC_005296.1 NAD(P)H quinone reductase 5358392 2690345 RPA4746 Rhodopseudomonas palustris CGA009 NAD(P)H quinone reductase NP_950080.1 5357574 R 258594 CDS NP_950081.1 39937805 2690339 5358469..5359383 1 NC_005296.1 LysR family transcriptional regulator 5359383 2690339 RPA4747 Rhodopseudomonas palustris CGA009 LysR family transcriptional regulator NP_950081.1 5358469 D 258594 CDS NP_950082.1 39937806 2690340 complement(5359398..5360279) 1 NC_005296.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 5360279 hbdA 2690340 hbdA Rhodopseudomonas palustris CGA009 3-hydroxybutyryl-CoA dehydrogenase NP_950082.1 5359398 R 258594 CDS NP_950083.1 39937807 2690335 complement(5360445..5361389) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; electron transfer flavoprotein subunit alpha 5361389 etfA 2690335 etfA Rhodopseudomonas palustris CGA009 electron transfer flavoprotein subunit alpha NP_950083.1 5360445 R 258594 CDS NP_950084.1 39937808 2690698 complement(5361389..5362138) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; electron transfer flavoprotein subunit beta 5362138 etfB 2690698 etfB Rhodopseudomonas palustris CGA009 electron transfer flavoprotein subunit beta NP_950084.1 5361389 R 258594 CDS NP_950085.1 39937809 2690784 complement(5362244..5362816) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5362816 2690784 RPA4751 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950085.1 5362244 R 258594 CDS NP_950086.1 39937810 2691111 5363202..5364095 1 NC_005296.1 ribonuclease BN 5364095 rbn1 2691111 rbn1 Rhodopseudomonas palustris CGA009 ribonuclease BN NP_950086.1 5363202 D 258594 CDS NP_950087.1 39937811 2689912 complement(5364022..5365239) 1 NC_005296.1 histidine kinase with a response regulator receiver domain 5365239 2689912 RPA4753 Rhodopseudomonas palustris CGA009 histidine kinase with a response regulator receiver domain NP_950087.1 5364022 R 258594 CDS NP_950088.2 161610768 2690773 complement(5365339..5366220) 1 NC_005296.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 5366220 2690773 RPA4754 Rhodopseudomonas palustris CGA009 glutamyl-Q tRNA(Asp) synthetase NP_950088.2 5365339 R 258594 CDS NP_950089.1 39937813 2690775 5366291..5367061 1 NC_005296.1 HhH-GPD 5367061 2690775 RPA4755 Rhodopseudomonas palustris CGA009 HhH-GPD NP_950089.1 5366291 D 258594 CDS NP_950090.1 39937814 2689886 complement(5367193..5367639) 1 NC_005296.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 5367639 2689886 RPA4756 Rhodopseudomonas palustris CGA009 nickel responsive regulator NP_950090.1 5367193 R 258594 CDS NP_950091.1 39937815 2689725 5367760..5369976 1 NC_005296.1 outer membrane receptor for iron transport 5369976 2689725 RPA4757 Rhodopseudomonas palustris CGA009 outer membrane receptor for iron transport NP_950091.1 5367760 D 258594 CDS NP_950092.1 39937816 2690312 5370412..5370765 1 NC_005296.1 hypothetical protein 5370765 2690312 RPA4758 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950092.1 5370412 D 258594 CDS NP_950093.1 39937817 2692629 complement(5370812..5372428) 1 NC_005296.1 glycosyl hydrolase family protein 5372428 2692629 RPA4759 Rhodopseudomonas palustris CGA009 glycosyl hydrolase family protein NP_950093.1 5370812 R 258594 CDS NP_950094.1 39937818 2690301 5372942..5373475 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; hypothetical protein 5373475 2690301 RPA4760 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950094.1 5372942 D 258594 CDS NP_950095.1 39937819 2690287 5373755..5374279 1 NC_005296.1 hypothetical protein 5374279 2690287 RPA4761 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950095.1 5373755 D 258594 CDS NP_950096.1 39937820 2690282 5374977..5375570 1 NC_005296.1 methylated-DNA--protein-cysteine methyltransferase 5375570 ogt2 2690282 ogt2 Rhodopseudomonas palustris CGA009 methylated-DNA--protein-cysteine methyltransferase NP_950096.1 5374977 D 258594 CDS NP_950097.1 39937821 2691926 complement(5375567..5377003) 1 NC_005296.1 cation efflux pump 5377003 2691926 RPA4763 Rhodopseudomonas palustris CGA009 cation efflux pump NP_950097.1 5375567 R 258594 CDS NP_950098.1 39937822 2690260 5377514..5379493 1 NC_005296.1 metallo-phosphoesterase:Tat pathway signal 5379493 2690260 RPA4764 Rhodopseudomonas palustris CGA009 metallo-phosphoesterase:Tat pathway signal NP_950098.1 5377514 D 258594 CDS NP_950099.1 39937823 2690248 complement(5379553..5380686) 1 NC_005296.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 5380686 2690248 RPA4765 Rhodopseudomonas palustris CGA009 2'-deoxycytidine 5'-triphosphate deaminase NP_950099.1 5379553 R 258594 CDS NP_950100.1 39937824 2690242 5380923..5382134 1 NC_005296.1 catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis; O-succinylhomoserine sulfhydrylase 5382134 metZ 2690242 metZ Rhodopseudomonas palustris CGA009 O-succinylhomoserine sulfhydrylase NP_950100.1 5380923 D 258594 CDS NP_950101.1 39937825 2690227 complement(5382282..5383250) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; GDSL family lipase 5383250 2690227 RPA4767 Rhodopseudomonas palustris CGA009 GDSL family lipase NP_950101.1 5382282 R 258594 CDS NP_950102.1 39937826 2690223 complement(5383250..5384029) 1 NC_005296.1 hypothetical protein 5384029 2690223 RPA4768 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950102.1 5383250 R 258594 CDS NP_950103.1 39937827 2692645 complement(5384026..5385291) 1 NC_005296.1 OpgC protein 5385291 opgC 2692645 opgC Rhodopseudomonas palustris CGA009 OpgC protein NP_950103.1 5384026 R 258594 CDS NP_950104.1 39937828 2690183 5385542..5385934 1 NC_005296.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 5385934 apaG 2690183 apaG Rhodopseudomonas palustris CGA009 ApaG protein NP_950104.1 5385542 D 258594 CDS NP_950105.1 39937829 2690188 complement(5386010..5387011) 1 NC_005296.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; heat shock protein 33 5387011 hslO 2690188 hslO Rhodopseudomonas palustris CGA009 heat shock protein 33 NP_950105.1 5386010 R 258594 CDS NP_950106.1 39937830 2690176 complement(5387283..5388215) 1 NC_005296.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 5388215 argF 2690176 argF Rhodopseudomonas palustris CGA009 ornithine carbamoyltransferase NP_950106.1 5387283 R 258594 CDS NP_950107.2 161610767 2690169 complement(5388212..5389423) 1 NC_005296.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 5389423 argD 2690169 argD Rhodopseudomonas palustris CGA009 acetylornithine transaminase protein NP_950107.2 5388212 R 258594 CDS NP_950108.1 39937832 2690172 5389767..5390408 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; GcrA cell cycle regulator 5390408 2690172 RPA4774 Rhodopseudomonas palustris CGA009 GcrA cell cycle regulator NP_950108.1 5389767 D 258594 CDS NP_950109.1 39937833 2690152 complement(5390650..5391363) 1 NC_005296.1 winged helix family two component transcriptional regulator 5391363 phoB 2690152 phoB Rhodopseudomonas palustris CGA009 winged helix family two component transcriptional regulator NP_950109.1 5390650 R 258594 CDS NP_950110.1 39937834 2690139 complement(5391441..5392157) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; phosphate uptake regulator PhoU 5392157 phoU 2690139 phoU Rhodopseudomonas palustris CGA009 phosphate uptake regulator PhoU NP_950110.1 5391441 R 258594 CDS NP_950111.1 39937835 2690127 complement(5392181..5393002) 1 NC_005296.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 5393002 pstB 2690127 pstB Rhodopseudomonas palustris CGA009 phosphate transporter ATP-binding protein NP_950111.1 5392181 R 258594 CDS NP_950112.1 39937836 2690119 complement(5392999..5393862) 1 NC_005296.1 phosphate ABC transporter permease 5393862 pstA 2690119 pstA Rhodopseudomonas palustris CGA009 phosphate ABC transporter permease NP_950112.1 5392999 R 258594 CDS NP_950113.1 39937837 2690106 complement(5393864..5394865) 1 NC_005296.1 phosphate ABC transporter permease 5394865 pstC 2690106 pstC Rhodopseudomonas palustris CGA009 phosphate ABC transporter permease NP_950113.1 5393864 R 258594 CDS NP_950114.1 39937838 2690085 complement(5395079..5396089) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; periplasmic phosphate binding protein 5396089 pstS1 2690085 pstS1 Rhodopseudomonas palustris CGA009 periplasmic phosphate binding protein NP_950114.1 5395079 R 258594 CDS NP_950115.1 39937839 2690083 complement(5396238..5397587) 1 NC_005296.1 two component sensor histidine kinase phoR 5397587 phoR 2690083 phoR Rhodopseudomonas palustris CGA009 two component sensor histidine kinase phoR NP_950115.1 5396238 R 258594 CDS NP_950116.1 39937840 2689840 complement(5397591..5398625) 1 NC_005296.1 hypothetical protein 5398625 2689840 RPA4782 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950116.1 5397591 R 258594 CDS NP_950117.1 39937841 2691704 complement(5398873..5399169) 1 NC_005296.1 hypothetical protein 5399169 2691704 RPA4783 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950117.1 5398873 R 258594 CDS NP_950118.1 39937842 2691098 complement(5399173..5400567) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; OmpA/MotB domain-containing protein 5400567 2691098 RPA4784 Rhodopseudomonas palustris CGA009 OmpA/MotB domain-containing protein NP_950118.1 5399173 R 258594 CDS NP_950119.1 39937843 2691079 5400723..5401781 1 NC_005296.1 polysaccharide deacetylase 5401781 2691079 RPA4785 Rhodopseudomonas palustris CGA009 polysaccharide deacetylase NP_950119.1 5400723 D 258594 CDS NP_950120.1 39937844 2691068 5401842..5402648 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; short-chain dehydrogenase/reductase SDR 5402648 rhlG 2691068 rhlG Rhodopseudomonas palustris CGA009 short-chain dehydrogenase/reductase SDR NP_950120.1 5401842 D 258594 CDS NP_950121.1 39937845 2691064 5402871..5403788 1 NC_005296.1 consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate; anaerobic benzoate catabolism transcriptional regulator 5403788 2691064 RPA4787 Rhodopseudomonas palustris CGA009 anaerobic benzoate catabolism transcriptional regulator NP_950121.1 5402871 D 258594 CDS NP_950122.1 39937846 2692690 complement(5403795..5405123) 1 NC_005296.1 family 1 extracellular solute-binding protein 5405123 ugpB2 2692690 ugpB2 Rhodopseudomonas palustris CGA009 family 1 extracellular solute-binding protein NP_950122.1 5403795 R 258594 CDS NP_950123.1 39937847 2690061 5405300..5407411 1 NC_005296.1 sensor signal transduction histidine kinase 5407411 2690061 RPA4789 Rhodopseudomonas palustris CGA009 sensor signal transduction histidine kinase NP_950123.1 5405300 D 258594 CDS NP_950124.1 39937848 2690939 5407468..5409120 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; response regulator receiver sensor signal transduction histidine kinase 5409120 2690939 RPA4790 Rhodopseudomonas palustris CGA009 response regulator receiver sensor signal transduction histidine kinase NP_950124.1 5407468 D 258594 CDS NP_950125.1 39937849 2692703 5409117..5409857 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; two-component transcriptional regulator 5409857 2692703 RPA4791 Rhodopseudomonas palustris CGA009 two-component transcriptional regulator NP_950125.1 5409117 D 258594 CDS NP_950126.1 39937850 2691956 5410062..5410673 1 NC_005296.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 5410673 2691956 RPA4792 Rhodopseudomonas palustris CGA009 RNA polymerase sigma factor NP_950126.1 5410062 D 258594 CDS NP_950127.1 39937851 2688751 5411181..5412587 1 NC_005296.1 cytochrome bd ubiquinol oxidase subunit I 5412587 QxtA 2688751 QxtA Rhodopseudomonas palustris CGA009 cytochrome bd ubiquinol oxidase subunit I NP_950127.1 5411181 D 258594 CDS NP_950128.1 39937852 2690611 5412601..5413611 1 NC_005296.1 cytochrome d ubiquinol oxidase subunit II 5413611 qxtB 2690611 qxtB Rhodopseudomonas palustris CGA009 cytochrome d ubiquinol oxidase subunit II NP_950128.1 5412601 D 258594 CDS NP_950129.1 39937853 2691131 5413608..5413739 1 NC_005296.1 hypothetical protein 5413739 2691131 RPA4795 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950129.1 5413608 D 258594 CDS NP_950130.1 39937854 2688831 5413781..5414374 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ErfK/YbiS/YcfS/YnhG protein 5414374 2688831 RPA4796 Rhodopseudomonas palustris CGA009 ErfK/YbiS/YcfS/YnhG protein NP_950130.1 5413781 D 258594 CDS NP_950131.1 39937855 2690844 5414421..5415455 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; ABC transporter amino acid binding protein 5415455 2690844 RPA4797 Rhodopseudomonas palustris CGA009 ABC transporter amino acid binding protein NP_950131.1 5414421 D 258594 CDS NP_950132.1 39937856 2693483 complement(5415801..5416940) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 5416940 2693483 RPA4798 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_950132.1 5415801 R 258594 CDS NP_950133.1 39937857 2693573 complement(5417107..5418291) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; acyl-CoA dehydrogenase 5418291 2693573 RPA4799 Rhodopseudomonas palustris CGA009 acyl-CoA dehydrogenase NP_950133.1 5417107 R 258594 CDS NP_950134.1 39937858 2693236 complement(5419057..5420268) 1 NC_005296.1 transporter 5420268 2693236 RPA4800 Rhodopseudomonas palustris CGA009 transporter NP_950134.1 5419057 R 258594 CDS NP_950135.1 39937859 2693188 complement(5420357..5421604) 1 NC_005296.1 major facilitator superfamily permease 5421604 2693188 RPA4801 Rhodopseudomonas palustris CGA009 major facilitator superfamily permease NP_950135.1 5420357 R 258594 CDS NP_950136.1 39937860 2693426 complement(5421680..5422411) 1 NC_005296.1 hypothetical protein 5422411 2693426 RPA4802 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950136.1 5421680 R 258594 CDS NP_950137.1 39937861 2693429 5422839..5424950 1 NC_005296.1 outer membrane hemin/siderophore receptor protein 5424950 2693429 RPA4803 Rhodopseudomonas palustris CGA009 outer membrane hemin/siderophore receptor protein NP_950137.1 5422839 D 258594 CDS NP_950138.1 39937862 2693323 5425107..5425394 1 NC_005296.1 hypothetical protein 5425394 2693323 RPA4804 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950138.1 5425107 D 258594 CDS NP_950139.1 39937863 2693298 5425568..5425762 1 NC_005296.1 hypothetical protein 5425762 2693298 RPA4805 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950139.1 5425568 D 258594 CDS NP_950140.1 39937864 2693182 complement(5425793..5427049) 1 NC_005296.1 hypothetical protein 5427049 2693182 RPA4806 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950140.1 5425793 R 258594 CDS NP_950141.1 39937865 2693380 5427284..5428504 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino-acid ABC transporter substrate-binding protein 5428504 2693380 RPA4807 Rhodopseudomonas palustris CGA009 branched chain amino-acid ABC transporter substrate-binding protein NP_950141.1 5427284 D 258594 CDS NP_950142.1 39937866 2693481 complement(5428619..5429905) 1 NC_005296.1 hexuronate transporter 5429905 2693481 RPA4808 Rhodopseudomonas palustris CGA009 hexuronate transporter NP_950142.1 5428619 R 258594 CDS NP_950143.1 39937867 2693589 5430178..5430831 1 NC_005296.1 ABC transporter ATP-binding protein 5430831 2693589 RPA4809 Rhodopseudomonas palustris CGA009 ABC transporter ATP-binding protein NP_950143.1 5430178 D 258594 CDS NP_950144.1 39937868 2693162 5430828..5433293 1 NC_005296.1 hypothetical protein 5433293 2693162 RPA4810 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950144.1 5430828 D 258594 CDS NP_950145.1 39937869 2693187 5433283..5434368 1 NC_005296.1 hypothetical protein 5434368 2693187 RPA4811 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950145.1 5433283 D 258594 CDS NP_950146.1 39937870 2693244 5434435..5434827 1 NC_005296.1 hypothetical protein 5434827 2693244 RPA4812 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950146.1 5434435 D 258594 CDS NP_950147.1 39937871 2693322 complement(5435015..5436208) 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; branched chain amino acid ABC transporter periplasmic-binding protein 5436208 2693322 RPA4813 Rhodopseudomonas palustris CGA009 branched chain amino acid ABC transporter periplasmic-binding protein NP_950147.1 5435015 R 258594 CDS NP_950148.1 39937872 2693318 complement(5436294..5437979) 1 NC_005296.1 hypothetical protein 5437979 2693318 RPA4814 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950148.1 5436294 R 258594 CDS NP_950149.1 39937873 2693213 complement(5438067..5439953) 1 NC_005296.1 molecular chaperone; heat shock protein 90 5439953 htpG 2693213 htpG Rhodopseudomonas palustris CGA009 heat shock protein 90 NP_950149.1 5438067 R 258594 CDS NP_950150.1 39937874 2693414 complement(5440041..5441417) 1 NC_005296.1 periplasmic sensor signal transduction histidine kinase 5441417 2693414 RPA4816 Rhodopseudomonas palustris CGA009 periplasmic sensor signal transduction histidine kinase NP_950150.1 5440041 R 258594 CDS NP_950151.1 39937875 2693603 complement(5441414..5442079) 1 NC_005296.1 two-component transcriptional regulator 5442079 2693603 RPA4817 Rhodopseudomonas palustris CGA009 two-component transcriptional regulator NP_950151.1 5441414 R 258594 CDS NP_950152.1 39937876 2693594 complement(5442079..5442417) 1 NC_005296.1 hypothetical protein 5442417 2693594 RPA4818 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950152.1 5442079 R 258594 CDS NP_950153.1 39937877 2693547 complement(5442515..5442823) 1 NC_005296.1 hypothetical protein 5442823 2693547 RPA4819 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950153.1 5442515 R 258594 CDS NP_950154.1 39937878 2693390 complement(5443007..5444131) 1 NC_005296.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 5444131 mtnA 2693390 mtnA Rhodopseudomonas palustris CGA009 methylthioribose-1-phosphate isomerase NP_950154.1 5443007 R 258594 CDS NP_950155.1 39937879 2693361 complement(5444305..5445180) 1 NC_005296.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 5445180 2693361 RPA4821 Rhodopseudomonas palustris CGA009 5'-methylthioadenosine phosphorylase NP_950155.1 5444305 R 258594 CDS NP_950156.1 39937880 2693468 5445459..5446601 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; alcohol dehydrogenase 5446601 2693468 RPA4822 Rhodopseudomonas palustris CGA009 alcohol dehydrogenase NP_950156.1 5445459 D 258594 CDS NP_950157.1 39937881 2693464 5446767..5448317 1 NC_005296.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5448317 2693464 RPA4823 Rhodopseudomonas palustris CGA009 acyl-CoA synthetase NP_950157.1 5446767 D 258594 CDS NP_950158.1 39937882 2693450 complement(5448369..5448743) 1 NC_005296.1 hypothetical protein 5448743 2693450 RPA4824 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950158.1 5448369 R 258594 CDS NP_950159.1 39937883 2693542 5448815..5449168 1 NC_005296.1 MerR family transcriptional regulator 5449168 2693542 RPA4825 Rhodopseudomonas palustris CGA009 MerR family transcriptional regulator NP_950159.1 5448815 D 258594 CDS NP_950160.1 39937884 2693543 5449244..5451094 1 NC_005296.1 DNA helicase 5451094 recQ 2693543 recQ Rhodopseudomonas palustris CGA009 DNA helicase NP_950160.1 5449244 D 258594 CDS NP_950161.1 39937885 2693519 5451162..5451389 1 NC_005296.1 hypothetical protein 5451389 2693519 RPA4827 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950161.1 5451162 D 258594 CDS NP_950162.1 39937886 2693511 complement(5451413..5451691) 1 NC_005296.1 hypothetical protein 5451691 2693511 RPA4828 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950162.1 5451413 R 258594 CDS NP_950163.1 39937887 2693504 5451971..5453557 1 NC_005296.1 observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; crotonobetaine/carnitine-CoA ligase 5453557 caiC 2693504 caiC Rhodopseudomonas palustris CGA009 crotonobetaine/carnitine-CoA ligase NP_950163.1 5451971 D 258594 CDS NP_950164.1 39937888 2693503 complement(5453665..5454777) 1 NC_005296.1 metal dependent phosphohydrolase domain-containing protein 5454777 2693503 RPA4830 Rhodopseudomonas palustris CGA009 metal dependent phosphohydrolase domain-containing protein NP_950164.1 5453665 R 258594 CDS NP_950165.1 39937889 2693494 5454965..5455354 1 NC_005296.1 hypothetical protein 5455354 2693494 RPA4831 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950165.1 5454965 D 258594 CDS NP_950166.1 39937890 2693477 5455410..5456081 1 NC_005296.1 dienelactone hydrolase 5456081 clcD 2693477 clcD Rhodopseudomonas palustris CGA009 dienelactone hydrolase NP_950166.1 5455410 D 258594 CDS NP_950167.1 39937891 2693442 complement(5456108..5456749) 1 NC_005296.1 polysaccharide export protein 5456749 2693442 RPA4833 Rhodopseudomonas palustris CGA009 polysaccharide export protein NP_950167.1 5456108 R 258594 CDS NP_950168.1 39937892 2693439 complement(5456885..5457541) 1 NC_005296.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 5457541 msrA2 2693439 msrA2 Rhodopseudomonas palustris CGA009 methionine sulfoxide reductase A NP_950168.1 5456885 R 258594 CDS NP_950169.1 39937893 2693441 complement(5457709..5458026) 1 NC_005296.1 hypothetical protein 5458026 2693441 RPA4835 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950169.1 5457709 R 258594 CDS NP_950170.1 39937894 2693368 5458392..5458658 1 NC_005296.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 5458658 rpsT 2693368 rpsT Rhodopseudomonas palustris CGA009 30S ribosomal protein S20 NP_950170.1 5458392 D 258594 CDS NP_950202.1 39840938 2693687 complement(410..1606) 1 NC_005297.1 replication protein 1606 repA 2693687 repA Rhodopseudomonas palustris CGA009 replication protein NP_950202.1 410 R 258594 CDS NP_950203.1 39840939 2693683 complement(2092..2745) 1 NC_005297.1 partition protein 2745 parA 2693683 parA Rhodopseudomonas palustris CGA009 partition protein NP_950203.1 2092 R 258594 CDS NP_950204.1 39840940 2693684 complement(2898..3968) 1 NC_005297.1 similar to plasmid encoded restriction endonuclease from Rhizobium leguminosarun VF39SM (Rochepeau et al., Mol. Gen. Genet. 256:387-396 (1997)); BsuBI-PstI family restriction endonuclease 3968 endo 2693684 endo Rhodopseudomonas palustris CGA009 BsuBI-PstI family restriction endonuclease NP_950204.1 2898 R 258594 CDS NP_950205.1 39840941 2693685 complement(3965..5794) 1 NC_005297.1 64% identity to plasmid encoded restriction methylase from Rhizobium leguminosarun VF39SM (Rochepeau et al., Mol. Gen. Genet. 256:387-396 (1997)); restriction methylase 5794 meth 2693685 meth Rhodopseudomonas palustris CGA009 restriction methylase NP_950205.1 3965 R 258594 CDS NP_950206.1 39840942 2693686 complement(5935..6492) 1 NC_005297.1 IPR006119 Resolvase, N-terminal, residues 2-137; IPR006120 Resolvase helix-turn-helix domain, residues 139-183, 43% identity to Q83SV1 DNA-invertase from Salmonella typhi; resolvase 6492 res 2693686 res Rhodopseudomonas palustris CGA009 resolvase NP_950206.1 5935 R 258594 CDS NP_950207.1 39840943 2693681 6692..7318 1 NC_005297.1 35% identity to Q9AGT5 homocitrate synthase from Rhizobium meliloti; hypothetical protein 7318 2693681 pRPA6 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950207.1 6692 D 258594 CDS NP_950208.1 39840944 2693682 complement(7452..8030) 1 NC_005297.1 hypothetical protein 8030 2693682 pRPA7 Rhodopseudomonas palustris CGA009 hypothetical protein NP_950208.1 7452 R 258594 CDS