-- dump date 20140620_034819 -- class Genbank::CDS -- table cds_note -- id note YP_005285556.1 COG1806 Uncharacterized protein conserved in bacteria YP_005285557.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005285558.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005285559.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_005285560.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_005285561.1 COG2337 Growth inhibitor YP_005285562.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005285563.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005285564.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005285566.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005285567.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005285568.1 COG1196 Chromosome segregation ATPases YP_005285571.1 COG0042 tRNA-dihydrouridine synthase YP_005285574.1 COG0802 Predicted ATPase or kinase YP_005285575.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005285576.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005285584.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005285586.1 COG0457 FOG: TPR repeat YP_005285587.1 COG0711 F0F1-type ATP synthase, subunit b YP_005285588.1 COG0711 F0F1-type ATP synthase, subunit b YP_005285589.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005285590.1 COG0356 F0F1-type ATP synthase, subunit a YP_005285591.1 COG5336 Uncharacterized protein conserved in bacteria YP_005285592.1 COG1651 Protein-disulfide isomerase YP_005285593.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_005285594.1 COG0500 SAM-dependent methyltransferases YP_005285596.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005285597.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_005285598.1 COG0262 Dihydrofolate reductase YP_005285599.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005285603.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005285604.1 COG1678 Putative transcriptional regulator YP_005285605.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005285613.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005285614.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005285616.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005285618.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005285619.1 COG1398 Fatty-acid desaturase YP_005285620.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005285621.1 COG0360 Ribosomal protein S6 YP_005285622.1 COG0238 Ribosomal protein S18 YP_005285623.1 COG0359 Ribosomal protein L9 YP_005285624.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005285625.1 COG0465 ATP-dependent Zn proteases YP_005285626.1 COG0270 Site-specific DNA methylase YP_005285627.1 COG0270 Site-specific DNA methylase YP_005285628.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005285630.1 COG1565 Uncharacterized conserved protein YP_005285631.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005285633.1 COG0668 Small-conductance mechanosensitive channel YP_005285634.1 COG0706 Preprotein translocase subunit YidC YP_005285635.1 COG0558 Phosphatidylglycerophosphate synthase YP_005285637.1 COG0500 SAM-dependent methyltransferases YP_005285640.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005285641.1 COG3202 ATP/ADP translocase YP_005285642.1 COG2271 Sugar phosphate permease YP_005285643.1 COG0105 Nucleoside diphosphate kinase YP_005285644.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005285645.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005285646.1 COG1192 ATPases involved in chromosome partitioning YP_005285647.1 COG1475 Predicted transcriptional regulators YP_005285648.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005285650.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005285653.1 COG0316 Uncharacterized conserved protein YP_005285654.1 COG0232 dGTP triphosphohydrolase YP_005285655.1 COG0018 Arginyl-tRNA synthetase YP_005285657.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005285659.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005285660.1 COG0717 Deoxycytidine deaminase YP_005285661.1 COG1952 Preprotein translocase subunit SecB YP_005285662.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005285663.1 COG2904 Uncharacterized protein conserved in bacteria YP_005285664.1 COG3820 Uncharacterized protein conserved in bacteria YP_005285665.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_005285666.1 COG3047 Outer membrane protein W YP_005285667.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005285668.1 COG0477 Permeases of the major facilitator superfamily YP_005285672.1 COG2188 Transcriptional regulators YP_005285673.1 COG0215 Cysteinyl-tRNA synthetase YP_005285674.1 COG0052 Ribosomal protein S2 YP_005285675.1 COG0264 Translation elongation factor Ts YP_005285679.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005285680.1 COG2121 Uncharacterized protein conserved in bacteria YP_005285681.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005285683.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005285684.1 COG0457 FOG: TPR repeat YP_005285685.1 COG2853 Surface lipoprotein YP_005285686.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_005285687.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005285688.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005285690.1 COG0787 Alanine racemase YP_005285691.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005285692.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005285695.1 COG0457 FOG: TPR repeat YP_005285697.1 COG0227 Ribosomal protein L28 YP_005285698.1 COG0254 Ribosomal protein L31 YP_005285699.1 COG0218 Predicted GTPase YP_005285700.1 COG0548 Acetylglutamate kinase YP_005285701.1 COG3702 Type IV secretory pathway, VirB3 components YP_005285702.1 COG3451 Type IV secretory pathway, VirB4 components YP_005285703.1 COG3704 Type IV secretory pathway, VirB6 components YP_005285704.1 COG3704 Type IV secretory pathway, VirB6 components YP_005285705.1 COG3704 Type IV secretory pathway, VirB6 components YP_005285706.1 COG3704 Type IV secretory pathway, VirB6 components YP_005285707.1 COG3704 Type IV secretory pathway, VirB6 components YP_005285710.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005285711.1 COG0335 Ribosomal protein L19 YP_005285712.1 COG3750 Uncharacterized protein conserved in bacteria YP_005285713.1 COG0341 Preprotein translocase subunit SecF YP_005285714.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_005285715.1 COG0681 Signal peptidase I YP_005285716.1 COG0571 dsRNA-specific ribonuclease YP_005285717.1 COG1159 GTPase YP_005285718.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005285719.1 COG0565 rRNA methylase YP_005285722.1 COG3660 Predicted nucleoside-diphosphate-sugar epimerase YP_005285723.1 COG0489 ATPases involved in chromosome partitioning YP_005285724.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005285725.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005285726.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005285727.1 COG1054 Predicted sulfurtransferase YP_005285728.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005285729.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_005285730.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005285731.1 COG0765 ABC-type amino acid transport system, permease component YP_005285732.1 COG0048 Ribosomal protein S12 YP_005285733.1 COG0049 Ribosomal protein S7 YP_005285734.1 COG0480 Translation elongation factors (GTPases) YP_005285735.1 COG0690 Preprotein translocase subunit SecE YP_005285736.1 COG0250 Transcription antiterminator YP_005285737.1 COG0080 Ribosomal protein L11 YP_005285738.1 COG0081 Ribosomal protein L1 YP_005285739.1 COG0244 Ribosomal protein L10 YP_005285740.1 COG0222 Ribosomal protein L7/L12 YP_005285741.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005285742.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005285743.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005285744.1 COG0260 Leucyl aminopeptidase YP_005285745.1 COG1192 ATPases involved in chromosome partitioning YP_005285747.1 COG0173 Aspartyl-tRNA synthetase YP_005285749.1 COG0670 Integral membrane protein, interacts with FtsH YP_005285750.1 COG0289 Dihydrodipicolinate reductase YP_005285751.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_005285752.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005285753.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005285754.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005285755.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005285757.1 COG0233 Ribosome recycling factor YP_005285758.1 COG0528 Uridylate kinase YP_005285759.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_005285760.1 COG0477 Permeases of the major facilitator superfamily YP_005285761.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005285765.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005285766.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005285767.1 COG0781 Transcription termination factor YP_005285768.1 COG0293 23S rRNA methylase YP_005285771.1 COG2867 Oligoketide cyclase/lipid transport protein YP_005285772.1 COG5508 Uncharacterized conserved small protein YP_005285773.1 COG1385 Uncharacterized protein conserved in bacteria YP_005285774.1 COG2155 Uncharacterized conserved protein YP_005285775.1 COG0841 Cation/multidrug efflux pump YP_005285776.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005285777.1 COG0470 ATPase involved in DNA replication YP_005285778.1 COG0541 Signal recognition particle GTPase YP_005285779.1 COG1505 Serine proteases of the peptidase family S9A YP_005285780.1 COG1505 Serine proteases of the peptidase family S9A YP_005285781.1 COG1505 Serine proteases of the peptidase family S9A YP_005285782.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005285784.1 COG0666 FOG: Ankyrin repeat YP_005285788.1 COG1301 Na+/H+-dicarboxylate symporters YP_005285789.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_005285790.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005285791.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005285793.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005285794.1 COG2317 Zn-dependent carboxypeptidase YP_005285795.1 COG0497 ATPase involved in DNA repair YP_005285796.1 COG4105 DNA uptake lipoprotein YP_005285798.1 COG4572 Putative cation transport regulator YP_005285799.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005285800.1 COG0443 Molecular chaperone YP_005285801.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005285802.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005285805.1 COG1466 DNA polymerase III, delta subunit YP_005285806.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_005285807.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005285810.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005285819.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005285820.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005285821.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_005285823.1 COG0633 Ferredoxin YP_005285824.1 COG0443 Molecular chaperone YP_005285825.1 COG1076 DnaJ-domain-containing proteins 1 YP_005285826.1 COG0164 Ribonuclease HII YP_005285827.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005285828.1 COG0695 Glutaredoxin and related proteins YP_005285829.1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components YP_005285832.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005285835.1 COG1301 Na+/H+-dicarboxylate symporters YP_005285840.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005285841.1 COG0223 Methionyl-tRNA formyltransferase YP_005285842.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005285843.1 COG4421 Capsular polysaccharide biosynthesis protein YP_005285844.1 COG1485 Predicted ATPase YP_005285846.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005285847.1 COG0666 FOG: Ankyrin repeat YP_005285850.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005285852.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005285853.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005285854.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005285855.1 COG4115 Uncharacterized protein conserved in bacteria YP_005285856.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005285857.1 COG0612 Predicted Zn-dependent peptidases YP_005285858.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_005285860.1 COG0441 Threonyl-tRNA synthetase YP_005285862.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005285863.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005285864.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005285870.1 COG1538 Outer membrane protein YP_005285871.1 COG3827 Uncharacterized protein conserved in bacteria YP_005285873.1 COG0666 FOG: Ankyrin repeat YP_005285874.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005285875.1 COG0793 Periplasmic protease YP_005285876.1 COG0642 Signal transduction histidine kinase YP_005285877.1 COG1729 Uncharacterized protein conserved in bacteria YP_005285879.1 COG1520 FOG: WD40-like repeat YP_005285880.1 COG0102 Ribosomal protein L13 YP_005285881.1 COG0103 Ribosomal protein S9 YP_005285882.1 COG2173 D-alanyl-D-alanine dipeptidase YP_005285883.1 COG2173 D-alanyl-D-alanine dipeptidase YP_005285887.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005285888.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_005285889.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005285890.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005285892.1 COG0688 Phosphatidylserine decarboxylase YP_005285893.1 COG1183 Phosphatidylserine synthase YP_005285894.1 COG1566 Multidrug resistance efflux pump YP_005285897.1 COG0271 Stress-induced morphogen (activity unknown) YP_005285898.1 COG2200 FOG: EAL domain YP_005285899.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005285900.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005285901.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005285902.1 COG1589 Cell division septal protein YP_005285903.1 COG0849 Actin-like ATPase involved in cell division YP_005285905.1 COG3474 Cytochrome c2 YP_005285907.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005285909.1 COG1530 Ribonucleases G and E YP_005285910.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_005285911.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005285912.1 COG0708 Exonuclease III YP_005285913.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005285914.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005285915.1 COG1217 Predicted membrane GTPase involved in stress response YP_005285919.1 COG2825 Outer membrane protein YP_005285920.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005285921.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_005285922.1 COG1563 Predicted subunit of the Multisubunit Na+/H+ antiporter YP_005285925.1 COG0723 Rieske Fe-S protein YP_005285926.1 COG1290 Cytochrome b subunit of the bc complex YP_005285928.1 COG2857 Cytochrome c1 YP_005285929.1 COG3067 Na+/H+ antiporter YP_005285930.1 COG0071 Molecular chaperone (small heat shock protein) YP_005285933.1 COG4804 Uncharacterized conserved protein YP_005285934.1 COG4804 Uncharacterized conserved protein YP_005285935.1 COG1186 Protein chain release factor B YP_005285936.1 COG0481 Membrane GTPase LepA YP_005285939.1 COG3093 Plasmid maintenance system antidote protein YP_005285942.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005285943.1 COG0477 Permeases of the major facilitator superfamily YP_005285944.1 COG0772 Bacterial cell division membrane protein YP_005285945.1 COG1770 Protease II YP_005285946.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005285947.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005285949.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005285950.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005285951.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_005285952.1 COG3504 Type IV secretory pathway, VirB9 components YP_005285953.1 COG3736 Type IV secretory pathway, component VirB8 YP_005285955.1 COG3736 Type IV secretory pathway, component VirB8 YP_005285956.1 COG3504 Type IV secretory pathway, VirB9 components YP_005285957.1 COG2948 Type IV secretory pathway, VirB10 components YP_005285958.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005285959.1 COG3505 Type IV secretory pathway, VirD4 components YP_005285960.1 COG0248 Exopolyphosphatase YP_005285968.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_005285969.1 COG0249 Mismatch repair ATPase (MutS family) YP_005285970.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005285971.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005285972.1 COG1451 Predicted metal-dependent hydrolase YP_005285973.1 COG1351 Predicted alternative thymidylate synthase YP_005285974.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005285975.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005285976.1 COG3175 Cytochrome oxidase assembly factor YP_005285977.1 COG0457 FOG: TPR repeat YP_005285978.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005285980.1 COG0531 Amino acid transporters YP_005285981.1 COG0124 Histidyl-tRNA synthetase YP_005285982.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005285983.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005285989.1 COG0811 Biopolymer transport proteins YP_005285990.1 COG0848 Biopolymer transport protein YP_005285993.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005285994.1 COG0477 Permeases of the major facilitator superfamily YP_005285995.1 COG0845 Membrane-fusion protein YP_005285996.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components YP_005285997.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005285998.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005286001.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005286002.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005286004.1 COG0606 Predicted ATPase with chaperone activity YP_005286005.1 COG0606 Predicted ATPase with chaperone activity YP_005286008.1 COG5464 Uncharacterized conserved protein YP_005286009.1 COG0763 Lipid A disaccharide synthetase YP_005286011.1 COG1559 Predicted periplasmic solute-binding protein YP_005286012.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_005286016.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005286017.1 COG0550 Topoisomerase IA YP_005286018.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005286019.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005286020.1 COG0450 Peroxiredoxin YP_005286021.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005286022.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005286023.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005286024.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005286025.1 COG3093 Plasmid maintenance system antidote protein YP_005286027.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_005286028.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005286029.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_005286031.1 COG0500 SAM-dependent methyltransferases YP_005286032.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005286033.1 COG0845 Membrane-fusion protein YP_005286035.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005286036.1 COG0438 Glycosyltransferase YP_005286039.1 COG0522 Ribosomal protein S4 and related proteins YP_005286040.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_005286041.1 COG1533 DNA repair photolyase YP_005286043.1 COG0457 FOG: TPR repeat YP_005286044.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_005286045.1 COG0806 RimM protein, required for 16S rRNA processing YP_005286047.1 COG1722 Exonuclease VII small subunit YP_005286048.1 COG5304 Uncharacterized protein conserved in bacteria YP_005286051.1 COG2094 3-methyladenine DNA glycosylase YP_005286052.1 COG2350 Uncharacterized protein conserved in bacteria YP_005286054.1 COG0759 Uncharacterized conserved protein YP_005286055.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_005286056.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005286057.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005286058.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005286059.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005286060.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005286061.1 COG4765 Uncharacterized protein conserved in bacteria YP_005286062.1 COG4974 Site-specific recombinase XerD YP_005286065.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005286066.1 COG0815 Apolipoprotein N-acyltransferase YP_005286068.1 COG3023 Negative regulator of beta-lactamase expression YP_005286069.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_005286070.1 COG4120 ABC-type uncharacterized transport system, permease component YP_005286071.1 COG1101 ABC-type uncharacterized transport system, ATPase component YP_005286073.1 COG0666 FOG: Ankyrin repeat YP_005286077.1 COG1495 Disulfide bond formation protein DsbB YP_005286078.1 COG1384 Lysyl-tRNA synthetase (class I) YP_005286079.1 COG0679 Predicted permeases YP_005286080.1 COG0281 Malic enzyme YP_005286083.1 COG4374 Uncharacterized protein conserved in bacteria YP_005286084.1 COG2002 Regulators of stationary/sporulation gene expression YP_005286085.1 COG0477 Permeases of the major facilitator superfamily YP_005286089.1 COG0541 Signal recognition particle GTPase YP_005286092.1 COG0039 Malate/lactate dehydrogenases YP_005286093.1 COG0666 FOG: Ankyrin repeat YP_005286094.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005286095.1 COG3202 ATP/ADP translocase YP_005286096.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005286097.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005286101.1 COG0302 GTP cyclohydrolase I YP_005286102.1 COG0442 Prolyl-tRNA synthetase YP_005286103.1 COG3177 Uncharacterized conserved protein YP_005286105.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005286108.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005286109.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005286110.1 COG0477 Permeases of the major facilitator superfamily YP_005286111.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005286112.1 COG0797 Lipoproteins YP_005286113.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_005286114.1 COG2917 Intracellular septation protein A YP_005286115.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005286117.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005286118.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_005286119.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005286120.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005286121.1 COG0756 dUTPase YP_005286122.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005286124.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005286125.1 COG2887 RecB family exonuclease YP_005286127.1 COG2071 Predicted glutamine amidotransferases YP_005286128.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005286129.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005286130.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005286131.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005286132.1 COG0597 Lipoprotein signal peptidase YP_005286134.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005286135.1 COG0772 Bacterial cell division membrane protein YP_005286136.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005286142.1 COG0841 Cation/multidrug efflux pump YP_005286143.1 COG0841 Cation/multidrug efflux pump YP_005286144.1 COG0841 Cation/multidrug efflux pump YP_005286145.1 COG0841 Cation/multidrug efflux pump YP_005286146.1 COG0841 Cation/multidrug efflux pump YP_005286147.1 COG0841 Cation/multidrug efflux pump YP_005286148.1 COG0841 Cation/multidrug efflux pump YP_005286150.1 COG0438 Glycosyltransferase YP_005286154.1 COG0253 Diaminopimelate epimerase YP_005286155.1 COG0621 2-methylthioadenine synthetase YP_005286156.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005286157.1 COG0073 EMAP domain YP_005286158.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005286162.1 COG0495 Leucyl-tRNA synthetase YP_005286164.1 COG0349 Ribonuclease D YP_005286165.1 COG2919 Septum formation initiator YP_005286166.1 COG0575 CDP-diglyceride synthetase YP_005286167.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005286168.1 COG0642 Signal transduction histidine kinase YP_005286169.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005286170.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005286171.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005286172.1 COG0691 tmRNA-binding protein YP_005286173.1 COG1651 Protein-disulfide isomerase YP_005286174.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_005286175.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005286176.1 COG2002 Regulators of stationary/sporulation gene expression YP_005286179.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_005286180.1 COG4395 Uncharacterized protein conserved in bacteria YP_005286181.1 COG1835 Predicted acyltransferases YP_005286182.1 COG1835 Predicted acyltransferases YP_005286183.1 COG0858 Ribosome-binding factor A YP_005286184.1 COG1238 Predicted membrane protein YP_005286185.1 COG1714 Predicted membrane protein/domain YP_005286186.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005286192.1 COG0061 Predicted sugar kinase YP_005286193.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005286194.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005286195.1 COG0679 Predicted permeases YP_005286196.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005286197.1 COG0492 Thioredoxin reductase YP_005286201.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005286202.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005286203.1 COG0210 Superfamily I DNA and RNA helicases YP_005286206.1 COG1171 Threonine dehydratase YP_005286207.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005286213.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_005286214.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005286215.1 COG0492 Thioredoxin reductase YP_005286216.1 COG3121 P pilus assembly protein, chaperone PapD YP_005286217.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005286219.1 COG5430 Uncharacterized secreted protein YP_005286222.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005286224.1 COG0208 Ribonucleotide reductase, beta subunit YP_005286225.1 COG1357 Uncharacterized low-complexity proteins YP_005286229.1 COG0516 IMP dehydrogenase/GMP reductase YP_005286230.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005286232.1 COG1109 Phosphomannomutase YP_005286234.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005286235.1 COG1934 Uncharacterized protein conserved in bacteria YP_005286236.1 COG5375 Uncharacterized protein conserved in bacteria YP_005286237.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005286238.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005286239.1 COG0184 Ribosomal protein S15P/S13E YP_005286240.1 COG0130 Pseudouridine synthase YP_005286241.1 COG3202 ATP/ADP translocase YP_005286242.1 COG0460 Homoserine dehydrogenase YP_005286243.1 COG1396 Predicted transcriptional regulators YP_005286244.1 COG1295 Predicted membrane protein YP_005286245.1 COG0174 Glutamine synthetase YP_005286246.1 COG1496 Uncharacterized conserved protein YP_005286247.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005286250.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005286253.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005286254.1 COG0625 Glutathione S-transferase YP_005286255.1 COG4285 Uncharacterized conserved protein YP_005286256.1 COG1268 Uncharacterized conserved protein YP_005286257.1 COG0285 Folylpolyglutamate synthase YP_005286258.1 COG0605 Superoxide dismutase YP_005286259.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005286260.1 COG5448 Uncharacterized conserved protein YP_005286262.1 COG5449 Uncharacterized conserved protein YP_005286264.1 COG5346 Predicted membrane protein YP_005286265.1 COG0290 Translation initiation factor 3 (IF-3) YP_005286266.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005286267.1 COG0216 Protein chain release factor A YP_005286268.1 COG0608 Single-stranded DNA-specific exonuclease YP_005286269.1 COG0500 SAM-dependent methyltransferases YP_005286270.1 COG1158 Transcription termination factor YP_005286271.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005286272.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005286276.1 COG3022 Uncharacterized protein conserved in bacteria YP_005286281.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005286283.1 COG0180 Tryptophanyl-tRNA synthetase YP_005286284.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005286285.1 COG5622 Protein required for attachment to host cells YP_005286287.1 COG3077 DNA-damage-inducible protein J YP_005286288.1 COG2945 Predicted hydrolase of the alpha/beta superfamily YP_005286289.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_005286291.1 COG1587 Uroporphyrinogen-III synthase YP_005286292.1 COG1279 Lysine efflux permease YP_005286294.1 COG0477 Permeases of the major facilitator superfamily YP_005286298.1 COG3202 ATP/ADP translocase YP_005286300.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005286301.1 COG0006 Xaa-Pro aminopeptidase YP_005286302.1 COG0531 Amino acid transporters YP_005286303.1 COG0316 Uncharacterized conserved protein YP_005286304.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005286305.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005286306.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005286307.1 COG1959 Predicted transcriptional regulator YP_005286312.1 COG4804 Uncharacterized conserved protein YP_005286313.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005286315.1 COG5628 Predicted acetyltransferase YP_005286316.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005286317.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005286318.1 COG0539 Ribosomal protein S1 YP_005286319.1 COG0283 Cytidylate kinase YP_005286320.1 COG1396 Predicted transcriptional regulators YP_005286328.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005286330.1 COG0181 Porphobilinogen deaminase YP_005286331.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005286332.1 COG0642 Signal transduction histidine kinase YP_005286333.1 COG0642 Signal transduction histidine kinase YP_005286334.1 COG0666 FOG: Ankyrin repeat YP_005286336.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_005286337.1 COG1723 Uncharacterized conserved protein YP_005286338.1 COG0349 Ribonuclease D YP_005286340.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005286341.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005286342.1 COG0500 SAM-dependent methyltransferases YP_005286344.1 COG0338 Site-specific DNA methylase YP_005286348.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005286351.1 COG0217 Uncharacterized conserved protein YP_005286352.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005286356.1 COG1694 Predicted pyrophosphatase YP_005286357.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005286359.1 COG0714 MoxR-like ATPases YP_005286364.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005286366.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005286371.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005286372.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005286374.1 COG0305 Replicative DNA helicase YP_005286376.1 COG0814 Amino acid permeases YP_005286378.1 COG0814 Amino acid permeases YP_005286379.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005286380.1 COG1357 Uncharacterized low-complexity proteins YP_005286381.1 COG0742 N6-adenine-specific methylase YP_005286382.1 COG1066 Predicted ATP-dependent serine protease YP_005286383.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005286384.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_005286386.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005286388.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005286389.1 COG0195 Transcription elongation factor YP_005286390.1 COG0779 Uncharacterized protein conserved in bacteria YP_005286393.1 COG1959 Predicted transcriptional regulator YP_005286394.1 COG1189 Predicted rRNA methylase YP_005286395.1 COG0162 Tyrosyl-tRNA synthetase YP_005286397.1 COG5304 Uncharacterized protein conserved in bacteria YP_005286400.1 COG3547 Transposase and inactivated derivatives YP_005286403.1 COG2271 Sugar phosphate permease YP_005286404.1 COG1672 Predicted ATPase (AAA+ superfamily) YP_005286405.1 COG0477 Permeases of the major facilitator superfamily YP_005286406.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005286407.1 COG1040 Predicted amidophosphoribosyltransferases YP_005286413.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005286414.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_005286415.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005286416.1 COG1357 Uncharacterized low-complexity proteins YP_005286418.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005286421.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005286423.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005286424.1 COG2001 Uncharacterized protein conserved in bacteria YP_005286426.1 COG0591 Na+/proline symporter YP_005286428.1 COG0322 Nuclease subunit of the excinuclease complex YP_005286429.1 COG2847 Uncharacterized protein conserved in bacteria YP_005286430.1 COG4912 Predicted DNA alkylation repair enzyme YP_005286431.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005286432.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005286433.1 COG2169 Adenosine deaminase YP_005286434.1 COG2169 Adenosine deaminase YP_005286435.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005286442.1 COG0666 FOG: Ankyrin repeat YP_005286443.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005286444.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005286445.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005286446.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005286447.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005286448.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005286449.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005286450.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005286452.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005286457.1 COG4710 Predicted DNA-binding protein with an HTH domain YP_005286459.1 COG1862 Preprotein translocase subunit YajC YP_005286460.1 COG0342 Preprotein translocase subunit SecD YP_005286461.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005286462.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_005286463.1 COG0221 Inorganic pyrophosphatase YP_005286464.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005286467.1 COG1200 RecG-like helicase YP_005286468.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005286469.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005286470.1 COG0655 Multimeric flavodoxin WrbA YP_005286471.1 COG0655 Multimeric flavodoxin WrbA YP_005286473.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005286474.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005286475.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005286476.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005286477.1 COG2938 Uncharacterized conserved protein YP_005286478.1 COG0607 Rhodanese-related sulfurtransferase YP_005286479.1 COG0593 ATPase involved in DNA replication initiation YP_005286486.1 COG3621 Patatin YP_005286490.1 COG1708 Predicted nucleotidyltransferases YP_005286491.1 COG0012 Predicted GTPase, probable translation factor YP_005286492.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005286494.1 COG0193 Peptidyl-tRNA hydrolase YP_005286495.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005286496.1 COG0602 Organic radical activating enzymes YP_005286497.1 COG0291 Ribosomal protein L35 YP_005286498.1 COG0292 Ribosomal protein L20 YP_005286499.1 COG0230 Ribosomal protein L34 YP_005286502.1 COG1471 Ribosomal protein S4E YP_005286505.1 COG0598 Mg2+ and Co2+ transporters YP_005286507.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005286508.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005286509.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_005286511.1 COG0828 Ribosomal protein S21 YP_005286512.1 COG5590 Uncharacterized conserved protein YP_005286516.1 COG0060 Isoleucyl-tRNA synthetase YP_005286519.1 COG1729 Uncharacterized protein conserved in bacteria YP_005286521.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_005286522.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005286524.1 COG0477 Permeases of the major facilitator superfamily YP_005286526.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005286527.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_005286528.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005286529.1 COG5342 Invasion protein B, involved in pathogenesis YP_005286531.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005286532.1 COG0234 Co-chaperonin GroES (HSP10) YP_005286535.1 COG0689 RNase PH YP_005286536.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005286537.1 COG0628 Predicted permease YP_005286538.1 COG0593 ATPase involved in DNA replication initiation YP_005286542.1 COG0477 Permeases of the major facilitator superfamily YP_005286544.1 COG0268 Ribosomal protein S20 YP_005286545.1 COG0203 Ribosomal protein L17 YP_005286546.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005286547.1 COG0100 Ribosomal protein S11 YP_005286548.1 COG0099 Ribosomal protein S13 YP_005286549.1 COG0563 Adenylate kinase and related kinases YP_005286550.1 COG0201 Preprotein translocase subunit SecY YP_005286551.1 COG0200 Ribosomal protein L15 YP_005286552.1 COG1841 Ribosomal protein L30/L7E YP_005286553.1 COG0098 Ribosomal protein S5 YP_005286554.1 COG0256 Ribosomal protein L18 YP_005286555.1 COG0097 Ribosomal protein L6P/L9E YP_005286556.1 COG0096 Ribosomal protein S8 YP_005286557.1 COG0199 Ribosomal protein S14 YP_005286558.1 COG0094 Ribosomal protein L5 YP_005286559.1 COG0198 Ribosomal protein L24 YP_005286560.1 COG0093 Ribosomal protein L14 YP_005286561.1 COG0186 Ribosomal protein S17 YP_005286562.1 COG0255 Ribosomal protein L29 YP_005286563.1 COG0197 Ribosomal protein L16/L10E YP_005286564.1 COG0092 Ribosomal protein S3 YP_005286565.1 COG0091 Ribosomal protein L22 YP_005286566.1 COG0185 Ribosomal protein S19 YP_005286567.1 COG0090 Ribosomal protein L2 YP_005286568.1 COG0089 Ribosomal protein L23 YP_005286569.1 COG0088 Ribosomal protein L4 YP_005286570.1 COG0087 Ribosomal protein L3 YP_005286571.1 COG0051 Ribosomal protein S10 YP_005286573.1 COG0050 GTPases - translation elongation factors YP_005286574.1 COG0566 rRNA methylases YP_005286576.1 COG0114 Fumarase YP_005286577.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_005286579.1 COG0206 Cell division GTPase YP_005286581.1 COG4574 Serine protease inhibitor ecotin YP_005286582.1 COG0694 Thioredoxin-like proteins and domains YP_005286583.1 COG0477 Permeases of the major facilitator superfamily YP_005286584.1 COG0513 Superfamily II DNA and RNA helicases YP_005286585.1 COG1278 Cold shock proteins YP_005286586.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005286587.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005286588.1 COG1452 Organic solvent tolerance protein OstA YP_005286589.1 COG1570 Exonuclease VII, large subunit YP_005286591.1 COG0708 Exonuclease III YP_005286592.1 COG4095 Uncharacterized conserved protein YP_005286593.1 COG1160 Predicted GTPases YP_005286594.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005286597.1 COG0661 Predicted unusual protein kinase YP_005286598.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005286599.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_005286600.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_005286604.1 COG2958 Uncharacterized protein conserved in bacteria YP_005286607.1 COG2958 Uncharacterized protein conserved in bacteria YP_005286608.1 COG0084 Mg-dependent DNase YP_005286609.1 COG0143 Methionyl-tRNA synthetase YP_005286610.1 COG0125 Thymidylate kinase YP_005286611.1 COG0477 Permeases of the major facilitator superfamily YP_005286612.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005286614.1 COG0525 Valyl-tRNA synthetase YP_005286615.1 COG3475 LPS biosynthesis protein YP_005286616.1 COG3475 LPS biosynthesis protein YP_005286617.1 COG1322 Uncharacterized protein conserved in bacteria YP_005286622.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005286623.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005286624.1 COG0603 Predicted PP-loop superfamily ATPase YP_005286625.1 COG1598 Uncharacterized conserved protein YP_005286627.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005286629.1 COG0477 Permeases of the major facilitator superfamily YP_005286630.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005286631.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005286633.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_005286634.1 COG1138 Cytochrome c biogenesis factor YP_005286636.1 COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain YP_005286637.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005286638.1 COG1472 Beta-glucosidase-related glycosidases YP_005286639.1 COG0789 Predicted transcriptional regulators YP_005286640.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005286642.1 COG1225 Peroxiredoxin YP_005286643.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005286644.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005286645.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005286646.1 COG2961 Protein involved in catabolism of external DNA YP_005286647.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005286649.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005286650.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005286653.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005286654.1 COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_005286655.1 COG0328 Ribonuclease HI YP_005286656.1 COG3814 Uncharacterized protein conserved in bacteria YP_005286657.1 COG3494 Uncharacterized protein conserved in bacteria YP_005286658.1 COG0237 Dephospho-CoA kinase YP_005286659.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005286660.1 COG3346 Uncharacterized conserved protein YP_005286661.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005286664.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005286673.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_005286674.1 COG3202 ATP/ADP translocase YP_005286675.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005286676.1 COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance YP_005286677.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005286678.1 COG0319 Predicted metal-dependent hydrolase YP_005286681.1 COG0320 Lipoate synthase YP_005286682.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005286683.1 COG0400 Predicted esterase YP_005286684.1 COG0278 Glutaredoxin-related protein YP_005286685.1 COG0177 Predicted EndoIII-related endonuclease YP_005286689.1 COG5510 Predicted small secreted protein YP_005286692.1 COG0313 Predicted methyltransferases YP_005286693.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_005286694.1 COG1826 Sec-independent protein secretion pathway components YP_005286695.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005286696.1 COG0261 Ribosomal protein L21 YP_005286697.1 COG0211 Ribosomal protein L27 YP_005286698.1 COG0527 Aspartokinases YP_005286699.1 COG1396 Predicted transcriptional regulators YP_005286701.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005286705.1 COG0477 Permeases of the major facilitator superfamily YP_005286706.1 COG3027 Uncharacterized protein conserved in bacteria YP_005286707.1 COG0419 ATPase involved in DNA repair YP_005286708.1 COG1426 Uncharacterized protein conserved in bacteria YP_005286709.1 COG2902 NAD-specific glutamate dehydrogenase YP_005286710.1 COG0486 Predicted GTPase YP_005286712.1 COG0477 Permeases of the major facilitator superfamily YP_005286714.1 COG0468 RecA/RadA recombinase YP_005286715.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005286716.1 COG0236 Acyl carrier protein YP_005286717.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005286718.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005286721.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005286722.1 COG0194 Guanylate kinase YP_005286723.1 COG1396 Predicted transcriptional regulators YP_005286724.1 COG1792 Cell shape-determining protein YP_005286725.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005286726.1 COG0795 Predicted permeases YP_005286727.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005286729.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005286730.1 COG0333 Ribosomal protein L32 YP_005286731.1 COG2913 Small protein A (tmRNA-binding) YP_005286732.1 COG0552 Signal recognition particle GTPase YP_005286733.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005286734.1 COG0192 S-adenosylmethionine synthetase YP_005286735.1 COG0192 S-adenosylmethionine synthetase YP_005286736.1 COG0192 S-adenosylmethionine synthetase YP_005286740.1 COG0587 DNA polymerase III, alpha subunit YP_005286741.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005286743.1 COG0477 Permeases of the major facilitator superfamily YP_005286744.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005286745.1 COG0172 Seryl-tRNA synthetase YP_005286747.1 COG3451 Type IV secretory pathway, VirB4 components YP_005286749.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005286750.1 COG3637 Opacity protein and related surface antigens YP_005286751.1 COG0500 SAM-dependent methyltransferases YP_005286753.1 COG2944 Predicted transcriptional regulator YP_005286754.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005286755.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005286756.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005286757.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005286758.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_005286759.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005286760.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005286761.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005286762.1 COG3671 Predicted membrane protein YP_005286763.1 COG1048 Aconitase A YP_005286764.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005286765.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005286766.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005286767.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005286768.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005286769.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005286770.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005286772.1 COG2602 Beta-lactamase class D YP_005286773.1 COG2602 Beta-lactamase class D YP_005286774.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_005286775.1 COG0621 2-methylthioadenine synthetase YP_005286781.1 COG3807 Uncharacterized protein conserved in bacteria YP_005286782.1 COG0475 Kef-type K+ transport systems, membrane components YP_005286783.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005286784.1 COG0271 Stress-induced morphogen (activity unknown) YP_005286785.1 COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain YP_005286788.1 COG3209 Rhs family protein YP_005286795.1 COG0361 Translation initiation factor 1 (IF-1) YP_005286796.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005286797.1 COG1734 DnaK suppressor protein YP_005286798.1 COG0582 Integrase YP_005286800.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005286802.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_005286803.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005286804.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005286806.1 COG1140 Nitrate reductase beta subunit YP_005286807.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005286808.1 COG1835 Predicted acyltransferases YP_005286809.1 COG0024 Methionine aminopeptidase YP_005286810.1 COG2003 DNA repair proteins YP_005286811.1 COG2003 DNA repair proteins YP_005286812.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005286814.1 COG3637 Opacity protein and related surface antigens YP_005286815.1 COG3637 Opacity protein and related surface antigens YP_005286816.1 COG1146 Ferredoxin YP_005286817.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005286818.1 COG0590 Cytosine/adenosine deaminases YP_005286819.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005286820.1 COG4520 Surface antigen YP_005286821.1 COG1881 Phospholipid-binding protein YP_005286822.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005286826.1 COG0178 Excinuclease ATPase subunit YP_005286827.1 COG0629 Single-stranded DNA-binding protein YP_005286830.1 COG3772 Phage-related lysozyme (muraminidase) YP_005286832.1 COG1872 Uncharacterized conserved protein YP_005286833.1 COG0326 Molecular chaperone, HSP90 family YP_005286834.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005286836.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005286837.1 COG0536 Predicted GTPase YP_005286838.1 COG0372 Citrate synthase YP_005286840.1 COG1573 Uracil-DNA glycosylase YP_005286841.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005286844.1 COG2890 Methylase of polypeptide chain release factors YP_005286845.1 COG0009 Putative translation factor (SUA5) YP_005286846.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005286847.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005286848.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005286849.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005286850.1 COG1636 Uncharacterized protein conserved in bacteria YP_005286852.1 COG1474 Cdc6-related protein, AAA superfamily ATPase YP_005286854.1 COG0013 Alanyl-tRNA synthetase YP_005286855.1 COG0101 Pseudouridylate synthase YP_005286856.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005286857.1 COG0358 DNA primase (bacterial type) YP_005286858.1 COG0170 Dolichol kinase YP_005286859.1 COG0782 Transcription elongation factor YP_005286860.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_005286861.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_005286862.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005286863.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005286864.1 COG0718 Uncharacterized protein conserved in bacteria YP_005286867.1 COG3577 Predicted aspartyl protease YP_005286873.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005286874.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005286875.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005286876.1 COG0671 Membrane-associated phospholipid phosphatase YP_005286877.1 COG3077 DNA-damage-inducible protein J YP_005286878.1 COG3041 Uncharacterized protein conserved in bacteria YP_005286879.1 COG0795 Predicted permeases YP_005286880.1 COG2927 DNA polymerase III, chi subunit YP_005286882.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005286883.1 COG0732 Restriction endonuclease S subunits YP_005286885.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005286889.1 COG3004 Na+/H+ antiporter YP_005286891.1 COG1434 Uncharacterized conserved protein YP_005286892.1 COG0321 Lipoate-protein ligase B YP_005286893.1 COG3023 Negative regulator of beta-lactamase expression YP_005286894.1 COG0228 Ribosomal protein S16 YP_005286895.1 COG0267 Ribosomal protein L33 YP_005286896.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005286898.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005286900.1 COG0457 FOG: TPR repeat YP_005286901.1 COG0477 Permeases of the major facilitator superfamily YP_005286902.1 COG0408 Coproporphyrinogen III oxidase YP_005286903.1 COG1981 Predicted membrane protein YP_005286904.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005286905.1 COG0407 Uroporphyrinogen-III decarboxylase