-- dump date 20140620_034841 -- class Genbank::CDS -- table cds_note -- id note YP_005288262.1 COG1806 Uncharacterized protein conserved in bacteria YP_005288263.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005288264.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005288265.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_005288266.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_005288267.1 COG2337 Growth inhibitor YP_005288268.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005288269.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005288270.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005288272.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005288273.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005288274.1 COG1196 Chromosome segregation ATPases YP_005288277.1 COG0042 tRNA-dihydrouridine synthase YP_005288280.1 COG0802 Predicted ATPase or kinase YP_005288281.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005288282.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005288284.1 COG0658 Predicted membrane metal-binding protein YP_005288290.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005288292.1 COG0457 FOG: TPR repeat YP_005288293.1 COG0711 F0F1-type ATP synthase, subunit b YP_005288294.1 COG0711 F0F1-type ATP synthase, subunit b YP_005288295.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005288296.1 COG0356 F0F1-type ATP synthase, subunit a YP_005288297.1 COG5336 Uncharacterized protein conserved in bacteria YP_005288298.1 COG1651 Protein-disulfide isomerase YP_005288299.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_005288300.1 COG0500 SAM-dependent methyltransferases YP_005288302.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005288303.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_005288304.1 COG0262 Dihydrofolate reductase YP_005288306.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005288310.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005288311.1 COG1678 Putative transcriptional regulator YP_005288312.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005288320.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005288321.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005288323.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005288325.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005288326.1 COG1398 Fatty-acid desaturase YP_005288327.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005288328.1 COG0360 Ribosomal protein S6 YP_005288329.1 COG0238 Ribosomal protein S18 YP_005288330.1 COG0359 Ribosomal protein L9 YP_005288331.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005288332.1 COG0465 ATP-dependent Zn proteases YP_005288333.1 COG0270 Site-specific DNA methylase YP_005288334.1 COG0270 Site-specific DNA methylase YP_005288335.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005288337.1 COG1565 Uncharacterized conserved protein YP_005288338.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005288340.1 COG0668 Small-conductance mechanosensitive channel YP_005288341.1 COG0706 Preprotein translocase subunit YidC YP_005288342.1 COG0558 Phosphatidylglycerophosphate synthase YP_005288344.1 COG0500 SAM-dependent methyltransferases YP_005288347.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005288348.1 COG3202 ATP/ADP translocase YP_005288349.1 COG2271 Sugar phosphate permease YP_005288350.1 COG0105 Nucleoside diphosphate kinase YP_005288351.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005288352.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005288353.1 COG1192 ATPases involved in chromosome partitioning YP_005288354.1 COG1475 Predicted transcriptional regulators YP_005288355.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005288357.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005288361.1 COG0316 Uncharacterized conserved protein YP_005288362.1 COG0232 dGTP triphosphohydrolase YP_005288363.1 COG0018 Arginyl-tRNA synthetase YP_005288365.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005288368.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005288369.1 COG0717 Deoxycytidine deaminase YP_005288370.1 COG1952 Preprotein translocase subunit SecB YP_005288371.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005288372.1 COG2904 Uncharacterized protein conserved in bacteria YP_005288373.1 COG3820 Uncharacterized protein conserved in bacteria YP_005288374.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_005288375.1 COG3047 Outer membrane protein W YP_005288376.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005288377.1 COG0477 Permeases of the major facilitator superfamily YP_005288381.1 COG2188 Transcriptional regulators YP_005288382.1 COG0215 Cysteinyl-tRNA synthetase YP_005288383.1 COG0052 Ribosomal protein S2 YP_005288384.1 COG0264 Translation elongation factor Ts YP_005288387.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005288388.1 COG2121 Uncharacterized protein conserved in bacteria YP_005288389.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005288390.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005288391.1 COG0457 FOG: TPR repeat YP_005288392.1 COG2853 Surface lipoprotein YP_005288393.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_005288394.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005288395.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005288397.1 COG0787 Alanine racemase YP_005288398.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005288399.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005288404.1 COG0457 FOG: TPR repeat YP_005288406.1 COG0227 Ribosomal protein L28 YP_005288407.1 COG0254 Ribosomal protein L31 YP_005288408.1 COG0218 Predicted GTPase YP_005288409.1 COG0548 Acetylglutamate kinase YP_005288410.1 COG3702 Type IV secretory pathway, VirB3 components YP_005288411.1 COG3451 Type IV secretory pathway, VirB4 components YP_005288412.1 COG3704 Type IV secretory pathway, VirB6 components YP_005288413.1 COG3704 Type IV secretory pathway, VirB6 components YP_005288414.1 COG3704 Type IV secretory pathway, VirB6 components YP_005288415.1 COG3704 Type IV secretory pathway, VirB6 components YP_005288416.1 COG3704 Type IV secretory pathway, VirB6 components YP_005288419.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005288420.1 COG0335 Ribosomal protein L19 YP_005288421.1 COG3750 Uncharacterized protein conserved in bacteria YP_005288422.1 COG0341 Preprotein translocase subunit SecF YP_005288423.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_005288424.1 COG0681 Signal peptidase I YP_005288425.1 COG0571 dsRNA-specific ribonuclease YP_005288426.1 COG1159 GTPase YP_005288427.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005288428.1 COG0565 rRNA methylase YP_005288431.1 COG3660 Predicted nucleoside-diphosphate-sugar epimerase YP_005288432.1 COG0489 ATPases involved in chromosome partitioning YP_005288433.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005288434.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005288435.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005288436.1 COG1054 Predicted sulfurtransferase YP_005288437.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005288438.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_005288439.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005288440.1 COG0765 ABC-type amino acid transport system, permease component YP_005288441.1 COG0048 Ribosomal protein S12 YP_005288442.1 COG0049 Ribosomal protein S7 YP_005288443.1 COG0480 Translation elongation factors (GTPases) YP_005288444.1 COG0690 Preprotein translocase subunit SecE YP_005288445.1 COG0250 Transcription antiterminator YP_005288446.1 COG0080 Ribosomal protein L11 YP_005288447.1 COG0081 Ribosomal protein L1 YP_005288448.1 COG0244 Ribosomal protein L10 YP_005288449.1 COG0222 Ribosomal protein L7/L12 YP_005288450.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005288451.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005288453.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005288454.1 COG0260 Leucyl aminopeptidase YP_005288455.1 COG1192 ATPases involved in chromosome partitioning YP_005288457.1 COG0173 Aspartyl-tRNA synthetase YP_005288459.1 COG0670 Integral membrane protein, interacts with FtsH YP_005288460.1 COG0289 Dihydrodipicolinate reductase YP_005288461.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_005288462.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005288463.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005288464.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005288465.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005288467.1 COG0233 Ribosome recycling factor YP_005288468.1 COG0528 Uridylate kinase YP_005288469.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_005288470.1 COG0477 Permeases of the major facilitator superfamily YP_005288471.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005288474.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005288475.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005288476.1 COG0781 Transcription termination factor YP_005288477.1 COG0293 23S rRNA methylase YP_005288480.1 COG2867 Oligoketide cyclase/lipid transport protein YP_005288481.1 COG5508 Uncharacterized conserved small protein YP_005288482.1 COG1385 Uncharacterized protein conserved in bacteria YP_005288483.1 COG2155 Uncharacterized conserved protein YP_005288484.1 COG0841 Cation/multidrug efflux pump YP_005288485.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005288486.1 COG0470 ATPase involved in DNA replication YP_005288487.1 COG0541 Signal recognition particle GTPase YP_005288488.1 COG1505 Serine proteases of the peptidase family S9A YP_005288489.1 COG1505 Serine proteases of the peptidase family S9A YP_005288490.1 COG1505 Serine proteases of the peptidase family S9A YP_005288491.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005288493.1 COG0666 FOG: Ankyrin repeat YP_005288497.1 COG1301 Na+/H+-dicarboxylate symporters YP_005288498.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_005288499.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005288500.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005288502.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005288503.1 COG2317 Zn-dependent carboxypeptidase YP_005288504.1 COG0497 ATPase involved in DNA repair YP_005288505.1 COG4105 DNA uptake lipoprotein YP_005288506.1 COG4572 Putative cation transport regulator YP_005288507.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005288508.1 COG0443 Molecular chaperone YP_005288509.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005288510.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005288513.1 COG1466 DNA polymerase III, delta subunit YP_005288514.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_005288516.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005288519.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005288527.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005288528.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005288529.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_005288531.1 COG0633 Ferredoxin YP_005288532.1 COG0443 Molecular chaperone YP_005288533.1 COG1076 DnaJ-domain-containing proteins 1 YP_005288534.1 COG0164 Ribonuclease HII YP_005288535.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005288536.1 COG0695 Glutaredoxin and related proteins YP_005288537.1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components YP_005288540.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005288543.1 COG1301 Na+/H+-dicarboxylate symporters YP_005288548.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005288549.1 COG0223 Methionyl-tRNA formyltransferase YP_005288550.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005288551.1 COG4421 Capsular polysaccharide biosynthesis protein YP_005288552.1 COG1485 Predicted ATPase YP_005288553.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005288554.1 COG0666 FOG: Ankyrin repeat YP_005288557.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005288559.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005288560.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005288561.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005288562.1 COG4115 Uncharacterized protein conserved in bacteria YP_005288563.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005288564.1 COG0612 Predicted Zn-dependent peptidases YP_005288565.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_005288567.1 COG0441 Threonyl-tRNA synthetase YP_005288569.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005288570.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005288571.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005288577.1 COG1538 Outer membrane protein YP_005288578.1 COG3827 Uncharacterized protein conserved in bacteria YP_005288580.1 COG0666 FOG: Ankyrin repeat YP_005288581.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005288582.1 COG0793 Periplasmic protease YP_005288583.1 COG0642 Signal transduction histidine kinase YP_005288584.1 COG1729 Uncharacterized protein conserved in bacteria YP_005288586.1 COG1520 FOG: WD40-like repeat YP_005288587.1 COG0102 Ribosomal protein L13 YP_005288588.1 COG0103 Ribosomal protein S9 YP_005288589.1 COG2173 D-alanyl-D-alanine dipeptidase YP_005288590.1 COG2173 D-alanyl-D-alanine dipeptidase YP_005288594.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005288595.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_005288596.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005288597.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005288599.1 COG0688 Phosphatidylserine decarboxylase YP_005288600.1 COG1183 Phosphatidylserine synthase YP_005288601.1 COG1566 Multidrug resistance efflux pump YP_005288605.1 COG0271 Stress-induced morphogen (activity unknown) YP_005288606.1 COG2200 FOG: EAL domain YP_005288607.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005288608.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005288609.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005288610.1 COG1589 Cell division septal protein YP_005288611.1 COG0849 Actin-like ATPase involved in cell division YP_005288613.1 COG3474 Cytochrome c2 YP_005288615.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005288617.1 COG1530 Ribonucleases G and E YP_005288618.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_005288619.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005288620.1 COG0708 Exonuclease III YP_005288621.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005288622.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005288623.1 COG1217 Predicted membrane GTPase involved in stress response YP_005288627.1 COG2825 Outer membrane protein YP_005288628.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005288629.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_005288630.1 COG1563 Predicted subunit of the Multisubunit Na+/H+ antiporter YP_005288633.1 COG0723 Rieske Fe-S protein YP_005288634.1 COG1290 Cytochrome b subunit of the bc complex YP_005288636.1 COG2857 Cytochrome c1 YP_005288637.1 COG3067 Na+/H+ antiporter YP_005288638.1 COG0071 Molecular chaperone (small heat shock protein) YP_005288640.1 COG4804 Uncharacterized conserved protein YP_005288641.1 COG4804 Uncharacterized conserved protein YP_005288642.1 COG1186 Protein chain release factor B YP_005288643.1 COG0481 Membrane GTPase LepA YP_005288646.1 COG3093 Plasmid maintenance system antidote protein YP_005288649.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005288650.1 COG0477 Permeases of the major facilitator superfamily YP_005288651.1 COG0772 Bacterial cell division membrane protein YP_005288652.1 COG1770 Protease II YP_005288653.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005288654.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005288656.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005288657.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005288658.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_005288659.1 COG3504 Type IV secretory pathway, VirB9 components YP_005288660.1 COG3736 Type IV secretory pathway, component VirB8 YP_005288662.1 COG3736 Type IV secretory pathway, component VirB8 YP_005288663.1 COG3504 Type IV secretory pathway, VirB9 components YP_005288664.1 COG2948 Type IV secretory pathway, VirB10 components YP_005288665.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005288666.1 COG3505 Type IV secretory pathway, VirD4 components YP_005288667.1 COG0248 Exopolyphosphatase YP_005288675.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_005288676.1 COG0249 Mismatch repair ATPase (MutS family) YP_005288677.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005288678.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005288679.1 COG1451 Predicted metal-dependent hydrolase YP_005288680.1 COG1351 Predicted alternative thymidylate synthase YP_005288681.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005288682.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005288683.1 COG3175 Cytochrome oxidase assembly factor YP_005288684.1 COG0457 FOG: TPR repeat YP_005288685.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005288687.1 COG0531 Amino acid transporters YP_005288688.1 COG0124 Histidyl-tRNA synthetase YP_005288689.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005288690.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005288696.1 COG0811 Biopolymer transport proteins YP_005288697.1 COG0848 Biopolymer transport protein YP_005288700.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005288701.1 COG0477 Permeases of the major facilitator superfamily YP_005288702.1 COG0845 Membrane-fusion protein YP_005288703.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components YP_005288704.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005288705.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005288708.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005288709.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005288711.1 COG0606 Predicted ATPase with chaperone activity YP_005288712.1 COG0606 Predicted ATPase with chaperone activity YP_005288715.1 COG5464 Uncharacterized conserved protein YP_005288716.1 COG0763 Lipid A disaccharide synthetase YP_005288718.1 COG1559 Predicted periplasmic solute-binding protein YP_005288719.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_005288723.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005288724.1 COG0550 Topoisomerase IA YP_005288725.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005288726.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005288727.1 COG0450 Peroxiredoxin YP_005288728.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005288729.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005288730.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005288731.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005288732.1 COG3093 Plasmid maintenance system antidote protein YP_005288734.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_005288735.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005288736.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_005288738.1 COG0500 SAM-dependent methyltransferases YP_005288739.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005288740.1 COG0845 Membrane-fusion protein YP_005288742.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005288743.1 COG0438 Glycosyltransferase YP_005288746.1 COG0522 Ribosomal protein S4 and related proteins YP_005288747.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_005288748.1 COG1533 DNA repair photolyase YP_005288750.1 COG0457 FOG: TPR repeat YP_005288751.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_005288752.1 COG0806 RimM protein, required for 16S rRNA processing YP_005288754.1 COG1722 Exonuclease VII small subunit YP_005288755.1 COG5304 Uncharacterized protein conserved in bacteria YP_005288756.1 COG2094 3-methyladenine DNA glycosylase YP_005288757.1 COG2350 Uncharacterized protein conserved in bacteria YP_005288759.1 COG0759 Uncharacterized conserved protein YP_005288760.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_005288761.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005288762.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005288763.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005288764.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005288765.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005288766.1 COG4765 Uncharacterized protein conserved in bacteria YP_005288767.1 COG4974 Site-specific recombinase XerD YP_005288770.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005288771.1 COG0815 Apolipoprotein N-acyltransferase YP_005288773.1 COG3023 Negative regulator of beta-lactamase expression YP_005288774.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_005288775.1 COG4120 ABC-type uncharacterized transport system, permease component YP_005288776.1 COG1101 ABC-type uncharacterized transport system, ATPase component YP_005288778.1 COG0666 FOG: Ankyrin repeat YP_005288782.1 COG1495 Disulfide bond formation protein DsbB YP_005288783.1 COG1384 Lysyl-tRNA synthetase (class I) YP_005288784.1 COG0679 Predicted permeases YP_005288785.1 COG0281 Malic enzyme YP_005288788.1 COG4374 Uncharacterized protein conserved in bacteria YP_005288789.1 COG2002 Regulators of stationary/sporulation gene expression YP_005288790.1 COG0477 Permeases of the major facilitator superfamily YP_005288794.1 COG0541 Signal recognition particle GTPase YP_005288797.1 COG0039 Malate/lactate dehydrogenases YP_005288798.1 COG0666 FOG: Ankyrin repeat YP_005288799.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005288801.1 COG3202 ATP/ADP translocase YP_005288802.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005288803.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005288807.1 COG0302 GTP cyclohydrolase I YP_005288808.1 COG0442 Prolyl-tRNA synthetase YP_005288809.1 COG3177 Uncharacterized conserved protein YP_005288811.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005288814.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005288815.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005288816.1 COG0477 Permeases of the major facilitator superfamily YP_005288817.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005288818.1 COG0797 Lipoproteins YP_005288819.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_005288820.1 COG2917 Intracellular septation protein A YP_005288821.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005288823.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005288824.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_005288825.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005288826.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005288827.1 COG0756 dUTPase YP_005288828.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005288830.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005288831.1 COG2887 RecB family exonuclease YP_005288833.1 COG2071 Predicted glutamine amidotransferases YP_005288834.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005288835.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005288836.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005288837.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005288838.1 COG0597 Lipoprotein signal peptidase YP_005288840.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005288841.1 COG0772 Bacterial cell division membrane protein YP_005288842.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005288848.1 COG0841 Cation/multidrug efflux pump YP_005288849.1 COG0841 Cation/multidrug efflux pump YP_005288850.1 COG0841 Cation/multidrug efflux pump YP_005288851.1 COG0841 Cation/multidrug efflux pump YP_005288853.1 COG0438 Glycosyltransferase YP_005288857.1 COG0253 Diaminopimelate epimerase YP_005288858.1 COG0621 2-methylthioadenine synthetase YP_005288859.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005288860.1 COG0073 EMAP domain YP_005288861.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005288865.1 COG0495 Leucyl-tRNA synthetase YP_005288867.1 COG0349 Ribonuclease D YP_005288868.1 COG2919 Septum formation initiator YP_005288869.1 COG0575 CDP-diglyceride synthetase YP_005288870.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005288871.1 COG0642 Signal transduction histidine kinase YP_005288872.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005288873.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005288874.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005288875.1 COG0691 tmRNA-binding protein YP_005288876.1 COG1651 Protein-disulfide isomerase YP_005288877.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_005288878.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005288879.1 COG2002 Regulators of stationary/sporulation gene expression YP_005288882.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_005288883.1 COG4395 Uncharacterized protein conserved in bacteria YP_005288884.1 COG1835 Predicted acyltransferases YP_005288885.1 COG1835 Predicted acyltransferases YP_005288886.1 COG0858 Ribosome-binding factor A YP_005288887.1 COG1238 Predicted membrane protein YP_005288888.1 COG1714 Predicted membrane protein/domain YP_005288889.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005288895.1 COG0061 Predicted sugar kinase YP_005288896.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005288897.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005288898.1 COG0679 Predicted permeases YP_005288899.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005288900.1 COG0492 Thioredoxin reductase YP_005288904.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005288905.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005288906.1 COG0210 Superfamily I DNA and RNA helicases YP_005288909.1 COG1171 Threonine dehydratase YP_005288910.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005288916.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_005288917.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005288918.1 COG0492 Thioredoxin reductase YP_005288920.1 COG5430 Uncharacterized secreted protein YP_005288921.1 COG3121 P pilus assembly protein, chaperone PapD YP_005288922.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005288924.1 COG5430 Uncharacterized secreted protein YP_005288927.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005288929.1 COG0208 Ribonucleotide reductase, beta subunit YP_005288930.1 COG1357 Uncharacterized low-complexity proteins YP_005288931.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005288933.1 COG1109 Phosphomannomutase YP_005288935.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005288936.1 COG1934 Uncharacterized protein conserved in bacteria YP_005288937.1 COG5375 Uncharacterized protein conserved in bacteria YP_005288938.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005288939.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005288940.1 COG0184 Ribosomal protein S15P/S13E YP_005288941.1 COG0130 Pseudouridine synthase YP_005288942.1 COG3202 ATP/ADP translocase YP_005288943.1 COG0460 Homoserine dehydrogenase YP_005288944.1 COG1396 Predicted transcriptional regulators YP_005288945.1 COG1295 Predicted membrane protein YP_005288946.1 COG0174 Glutamine synthetase YP_005288947.1 COG1496 Uncharacterized conserved protein YP_005288948.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005288953.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005288954.1 COG0625 Glutathione S-transferase YP_005288955.1 COG4285 Uncharacterized conserved protein YP_005288956.1 COG1268 Uncharacterized conserved protein YP_005288957.1 COG0285 Folylpolyglutamate synthase YP_005288958.1 COG0605 Superoxide dismutase YP_005288959.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005288960.1 COG5448 Uncharacterized conserved protein YP_005288962.1 COG5449 Uncharacterized conserved protein YP_005288964.1 COG5346 Predicted membrane protein YP_005288965.1 COG0290 Translation initiation factor 3 (IF-3) YP_005288966.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005288967.1 COG0216 Protein chain release factor A YP_005288968.1 COG0608 Single-stranded DNA-specific exonuclease YP_005288969.1 COG0500 SAM-dependent methyltransferases YP_005288970.1 COG1158 Transcription termination factor YP_005288971.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005288972.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005288976.1 COG3022 Uncharacterized protein conserved in bacteria YP_005288981.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005288983.1 COG0180 Tryptophanyl-tRNA synthetase YP_005288984.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005288985.1 COG5622 Protein required for attachment to host cells YP_005288987.1 COG3077 DNA-damage-inducible protein J YP_005288988.1 COG2945 Predicted hydrolase of the alpha/beta superfamily YP_005288989.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_005288991.1 COG1587 Uroporphyrinogen-III synthase YP_005288992.1 COG1279 Lysine efflux permease YP_005288994.1 COG0477 Permeases of the major facilitator superfamily YP_005288997.1 COG3202 ATP/ADP translocase YP_005288999.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005289000.1 COG0006 Xaa-Pro aminopeptidase YP_005289001.1 COG0531 Amino acid transporters YP_005289002.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005289004.1 COG0316 Uncharacterized conserved protein YP_005289005.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005289006.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005289007.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005289008.1 COG1959 Predicted transcriptional regulator YP_005289014.1 COG4804 Uncharacterized conserved protein YP_005289015.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005289017.1 COG5628 Predicted acetyltransferase YP_005289018.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005289019.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005289020.1 COG0539 Ribosomal protein S1 YP_005289021.1 COG0283 Cytidylate kinase YP_005289022.1 COG1396 Predicted transcriptional regulators YP_005289029.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005289031.1 COG0181 Porphobilinogen deaminase YP_005289032.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005289033.1 COG0642 Signal transduction histidine kinase YP_005289034.1 COG0642 Signal transduction histidine kinase YP_005289035.1 COG0666 FOG: Ankyrin repeat YP_005289037.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_005289038.1 COG1723 Uncharacterized conserved protein YP_005289039.1 COG0349 Ribonuclease D YP_005289041.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005289042.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005289043.1 COG0500 SAM-dependent methyltransferases YP_005289045.1 COG0338 Site-specific DNA methylase YP_005289049.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005289052.1 COG0217 Uncharacterized conserved protein YP_005289053.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005289057.1 COG1694 Predicted pyrophosphatase YP_005289058.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005289060.1 COG0714 MoxR-like ATPases YP_005289064.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005289066.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005289070.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005289071.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005289073.1 COG0305 Replicative DNA helicase YP_005289075.1 COG0814 Amino acid permeases YP_005289077.1 COG0814 Amino acid permeases YP_005289078.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005289079.1 COG1357 Uncharacterized low-complexity proteins YP_005289080.1 COG0742 N6-adenine-specific methylase YP_005289081.1 COG1066 Predicted ATP-dependent serine protease YP_005289082.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005289083.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_005289085.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005289087.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005289088.1 COG0195 Transcription elongation factor YP_005289089.1 COG0779 Uncharacterized protein conserved in bacteria YP_005289092.1 COG1959 Predicted transcriptional regulator YP_005289093.1 COG1189 Predicted rRNA methylase YP_005289094.1 COG0162 Tyrosyl-tRNA synthetase YP_005289096.1 COG5304 Uncharacterized protein conserved in bacteria YP_005289099.1 COG3547 Transposase and inactivated derivatives YP_005289102.1 COG2271 Sugar phosphate permease YP_005289103.1 COG0477 Permeases of the major facilitator superfamily YP_005289104.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005289105.1 COG1040 Predicted amidophosphoribosyltransferases YP_005289111.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005289112.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_005289113.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005289114.1 COG1357 Uncharacterized low-complexity proteins YP_005289116.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005289119.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005289121.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005289122.1 COG2001 Uncharacterized protein conserved in bacteria YP_005289123.1 COG0591 Na+/proline symporter YP_005289125.1 COG0322 Nuclease subunit of the excinuclease complex YP_005289126.1 COG2847 Uncharacterized protein conserved in bacteria YP_005289127.1 COG4912 Predicted DNA alkylation repair enzyme YP_005289128.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005289129.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005289130.1 COG2169 Adenosine deaminase YP_005289131.1 COG2169 Adenosine deaminase YP_005289132.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005289139.1 COG0666 FOG: Ankyrin repeat YP_005289140.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005289141.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005289142.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005289143.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005289144.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005289145.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005289146.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005289147.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005289149.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005289154.1 COG4710 Predicted DNA-binding protein with an HTH domain YP_005289156.1 COG1862 Preprotein translocase subunit YajC YP_005289157.1 COG0342 Preprotein translocase subunit SecD YP_005289158.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005289159.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_005289160.1 COG0221 Inorganic pyrophosphatase YP_005289161.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005289164.1 COG1200 RecG-like helicase YP_005289165.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005289166.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005289167.1 COG0655 Multimeric flavodoxin WrbA YP_005289168.1 COG0655 Multimeric flavodoxin WrbA YP_005289170.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005289171.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005289172.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005289173.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005289174.1 COG2938 Uncharacterized conserved protein YP_005289175.1 COG0607 Rhodanese-related sulfurtransferase YP_005289176.1 COG0593 ATPase involved in DNA replication initiation YP_005289183.1 COG3621 Patatin YP_005289186.1 COG0477 Permeases of the major facilitator superfamily YP_005289188.1 COG1708 Predicted nucleotidyltransferases YP_005289189.1 COG0012 Predicted GTPase, probable translation factor YP_005289190.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005289192.1 COG0193 Peptidyl-tRNA hydrolase YP_005289193.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005289194.1 COG0602 Organic radical activating enzymes YP_005289195.1 COG0291 Ribosomal protein L35 YP_005289196.1 COG0292 Ribosomal protein L20 YP_005289197.1 COG0230 Ribosomal protein L34 YP_005289200.1 COG1471 Ribosomal protein S4E YP_005289203.1 COG0598 Mg2+ and Co2+ transporters YP_005289206.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005289207.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_005289209.1 COG0828 Ribosomal protein S21 YP_005289210.1 COG5590 Uncharacterized conserved protein YP_005289213.1 COG0060 Isoleucyl-tRNA synthetase YP_005289216.1 COG1729 Uncharacterized protein conserved in bacteria YP_005289218.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_005289219.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005289221.1 COG0477 Permeases of the major facilitator superfamily YP_005289223.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005289224.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_005289225.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005289226.1 COG5342 Invasion protein B, involved in pathogenesis YP_005289228.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005289229.1 COG0234 Co-chaperonin GroES (HSP10) YP_005289232.1 COG0689 RNase PH YP_005289233.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005289234.1 COG0628 Predicted permease YP_005289235.1 COG0593 ATPase involved in DNA replication initiation YP_005289236.1 COG0477 Permeases of the major facilitator superfamily YP_005289240.1 COG0477 Permeases of the major facilitator superfamily YP_005289242.1 COG0268 Ribosomal protein S20 YP_005289243.1 COG0203 Ribosomal protein L17 YP_005289244.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005289245.1 COG0100 Ribosomal protein S11 YP_005289246.1 COG0099 Ribosomal protein S13 YP_005289247.1 COG0563 Adenylate kinase and related kinases YP_005289248.1 COG0201 Preprotein translocase subunit SecY YP_005289249.1 COG0200 Ribosomal protein L15 YP_005289250.1 COG1841 Ribosomal protein L30/L7E YP_005289251.1 COG0098 Ribosomal protein S5 YP_005289252.1 COG0256 Ribosomal protein L18 YP_005289253.1 COG0097 Ribosomal protein L6P/L9E YP_005289254.1 COG0096 Ribosomal protein S8 YP_005289255.1 COG0199 Ribosomal protein S14 YP_005289256.1 COG0094 Ribosomal protein L5 YP_005289257.1 COG0198 Ribosomal protein L24 YP_005289258.1 COG0093 Ribosomal protein L14 YP_005289259.1 COG0186 Ribosomal protein S17 YP_005289260.1 COG0255 Ribosomal protein L29 YP_005289261.1 COG0197 Ribosomal protein L16/L10E YP_005289262.1 COG0092 Ribosomal protein S3 YP_005289263.1 COG0091 Ribosomal protein L22 YP_005289264.1 COG0185 Ribosomal protein S19 YP_005289265.1 COG0090 Ribosomal protein L2 YP_005289266.1 COG0089 Ribosomal protein L23 YP_005289267.1 COG0088 Ribosomal protein L4 YP_005289268.1 COG0087 Ribosomal protein L3 YP_005289269.1 COG0051 Ribosomal protein S10 YP_005289271.1 COG0050 GTPases - translation elongation factors YP_005289272.1 COG0566 rRNA methylases YP_005289274.1 COG0114 Fumarase YP_005289275.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_005289277.1 COG0206 Cell division GTPase YP_005289279.1 COG4574 Serine protease inhibitor ecotin YP_005289280.1 COG0694 Thioredoxin-like proteins and domains YP_005289281.1 COG0477 Permeases of the major facilitator superfamily YP_005289282.1 COG0513 Superfamily II DNA and RNA helicases YP_005289283.1 COG1278 Cold shock proteins YP_005289284.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005289285.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005289286.1 COG1452 Organic solvent tolerance protein OstA YP_005289287.1 COG1570 Exonuclease VII, large subunit YP_005289288.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005289290.1 COG0708 Exonuclease III YP_005289291.1 COG4095 Uncharacterized conserved protein YP_005289292.1 COG1160 Predicted GTPases YP_005289293.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005289296.1 COG0661 Predicted unusual protein kinase YP_005289297.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005289298.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_005289302.1 COG2958 Uncharacterized protein conserved in bacteria YP_005289305.1 COG2958 Uncharacterized protein conserved in bacteria YP_005289306.1 COG0084 Mg-dependent DNase YP_005289307.1 COG0143 Methionyl-tRNA synthetase YP_005289308.1 COG0125 Thymidylate kinase YP_005289309.1 COG0477 Permeases of the major facilitator superfamily YP_005289310.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005289312.1 COG0525 Valyl-tRNA synthetase YP_005289313.1 COG3475 LPS biosynthesis protein YP_005289314.1 COG3475 LPS biosynthesis protein YP_005289315.1 COG1322 Uncharacterized protein conserved in bacteria YP_005289319.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005289320.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005289321.1 COG0603 Predicted PP-loop superfamily ATPase YP_005289322.1 COG1598 Uncharacterized conserved protein YP_005289324.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005289326.1 COG0477 Permeases of the major facilitator superfamily YP_005289327.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005289328.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005289330.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_005289331.1 COG1138 Cytochrome c biogenesis factor YP_005289333.1 COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain YP_005289334.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005289335.1 COG1472 Beta-glucosidase-related glycosidases YP_005289336.1 COG0789 Predicted transcriptional regulators YP_005289337.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005289339.1 COG1225 Peroxiredoxin YP_005289340.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005289341.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005289342.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005289343.1 COG2961 Protein involved in catabolism of external DNA YP_005289344.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005289346.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005289347.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005289349.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005289350.1 COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_005289351.1 COG0328 Ribonuclease HI YP_005289352.1 COG3814 Uncharacterized protein conserved in bacteria YP_005289353.1 COG3494 Uncharacterized protein conserved in bacteria YP_005289354.1 COG0237 Dephospho-CoA kinase YP_005289355.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005289356.1 COG3346 Uncharacterized conserved protein YP_005289357.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005289360.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005289369.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_005289370.1 COG3202 ATP/ADP translocase YP_005289371.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005289372.1 COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance YP_005289373.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005289374.1 COG0319 Predicted metal-dependent hydrolase YP_005289377.1 COG0320 Lipoate synthase YP_005289378.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005289379.1 COG0400 Predicted esterase YP_005289380.1 COG0278 Glutaredoxin-related protein YP_005289381.1 COG0177 Predicted EndoIII-related endonuclease YP_005289385.1 COG5510 Predicted small secreted protein YP_005289388.1 COG0313 Predicted methyltransferases YP_005289389.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_005289390.1 COG1826 Sec-independent protein secretion pathway components YP_005289391.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005289392.1 COG0261 Ribosomal protein L21 YP_005289393.1 COG0211 Ribosomal protein L27 YP_005289394.1 COG0527 Aspartokinases YP_005289395.1 COG1396 Predicted transcriptional regulators YP_005289397.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005289401.1 COG0477 Permeases of the major facilitator superfamily YP_005289402.1 COG3027 Uncharacterized protein conserved in bacteria YP_005289403.1 COG0419 ATPase involved in DNA repair YP_005289404.1 COG1426 Uncharacterized protein conserved in bacteria YP_005289405.1 COG2902 NAD-specific glutamate dehydrogenase YP_005289406.1 COG0486 Predicted GTPase YP_005289408.1 COG0477 Permeases of the major facilitator superfamily YP_005289410.1 COG0468 RecA/RadA recombinase YP_005289411.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005289412.1 COG0236 Acyl carrier protein YP_005289413.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005289414.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005289417.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005289418.1 COG0194 Guanylate kinase YP_005289419.1 COG1396 Predicted transcriptional regulators YP_005289420.1 COG1792 Cell shape-determining protein YP_005289421.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005289422.1 COG0795 Predicted permeases YP_005289423.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005289425.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005289426.1 COG0333 Ribosomal protein L32 YP_005289427.1 COG2913 Small protein A (tmRNA-binding) YP_005289428.1 COG0552 Signal recognition particle GTPase YP_005289429.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005289430.1 COG0192 S-adenosylmethionine synthetase YP_005289431.1 COG0192 S-adenosylmethionine synthetase YP_005289433.1 COG0192 S-adenosylmethionine synthetase YP_005289437.1 COG0587 DNA polymerase III, alpha subunit YP_005289438.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005289440.1 COG0477 Permeases of the major facilitator superfamily YP_005289441.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005289442.1 COG0172 Seryl-tRNA synthetase YP_005289444.1 COG3451 Type IV secretory pathway, VirB4 components YP_005289446.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005289447.1 COG3637 Opacity protein and related surface antigens YP_005289448.1 COG0500 SAM-dependent methyltransferases YP_005289450.1 COG2944 Predicted transcriptional regulator YP_005289451.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005289452.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005289453.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005289454.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005289455.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_005289456.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005289457.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005289458.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005289459.1 COG3671 Predicted membrane protein YP_005289460.1 COG1048 Aconitase A YP_005289461.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005289462.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005289463.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005289464.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005289465.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005289466.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005289467.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005289469.1 COG2602 Beta-lactamase class D YP_005289470.1 COG2602 Beta-lactamase class D YP_005289471.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_005289472.1 COG0621 2-methylthioadenine synthetase YP_005289478.1 COG3807 Uncharacterized protein conserved in bacteria YP_005289479.1 COG0475 Kef-type K+ transport systems, membrane components YP_005289480.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005289481.1 COG0271 Stress-induced morphogen (activity unknown) YP_005289484.1 COG3209 Rhs family protein YP_005289489.1 COG0361 Translation initiation factor 1 (IF-1) YP_005289490.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005289491.1 COG1734 DnaK suppressor protein YP_005289492.1 COG0582 Integrase YP_005289494.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005289496.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_005289497.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005289498.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005289500.1 COG1140 Nitrate reductase beta subunit YP_005289502.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005289503.1 COG1835 Predicted acyltransferases YP_005289504.1 COG0024 Methionine aminopeptidase YP_005289505.1 COG2003 DNA repair proteins YP_005289506.1 COG2003 DNA repair proteins YP_005289507.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005289509.1 COG3637 Opacity protein and related surface antigens YP_005289510.1 COG3637 Opacity protein and related surface antigens YP_005289511.1 COG1146 Ferredoxin YP_005289512.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005289513.1 COG0590 Cytosine/adenosine deaminases YP_005289514.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005289515.1 COG4520 Surface antigen YP_005289516.1 COG1881 Phospholipid-binding protein YP_005289517.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005289521.1 COG0178 Excinuclease ATPase subunit YP_005289522.1 COG0629 Single-stranded DNA-binding protein YP_005289525.1 COG3772 Phage-related lysozyme (muraminidase) YP_005289527.1 COG1872 Uncharacterized conserved protein YP_005289528.1 COG0326 Molecular chaperone, HSP90 family YP_005289529.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005289532.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005289533.1 COG0536 Predicted GTPase YP_005289534.1 COG0372 Citrate synthase YP_005289536.1 COG1573 Uracil-DNA glycosylase YP_005289537.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005289540.1 COG2890 Methylase of polypeptide chain release factors YP_005289541.1 COG0009 Putative translation factor (SUA5) YP_005289542.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005289543.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005289544.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005289545.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005289546.1 COG1636 Uncharacterized protein conserved in bacteria YP_005289548.1 COG1474 Cdc6-related protein, AAA superfamily ATPase YP_005289550.1 COG0013 Alanyl-tRNA synthetase YP_005289551.1 COG0101 Pseudouridylate synthase YP_005289552.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005289553.1 COG0358 DNA primase (bacterial type) YP_005289554.1 COG0170 Dolichol kinase YP_005289555.1 COG0782 Transcription elongation factor YP_005289556.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_005289557.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_005289558.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005289559.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005289560.1 COG0718 Uncharacterized protein conserved in bacteria YP_005289563.1 COG3577 Predicted aspartyl protease YP_005289569.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005289570.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005289571.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005289572.1 COG0671 Membrane-associated phospholipid phosphatase YP_005289573.1 COG3077 DNA-damage-inducible protein J YP_005289574.1 COG3041 Uncharacterized protein conserved in bacteria YP_005289575.1 COG0795 Predicted permeases YP_005289576.1 COG2927 DNA polymerase III, chi subunit YP_005289578.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005289579.1 COG0732 Restriction endonuclease S subunits YP_005289581.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005289586.1 COG3004 Na+/H+ antiporter YP_005289587.1 COG1434 Uncharacterized conserved protein YP_005289588.1 COG0321 Lipoate-protein ligase B YP_005289589.1 COG3023 Negative regulator of beta-lactamase expression YP_005289590.1 COG0228 Ribosomal protein S16 YP_005289591.1 COG0267 Ribosomal protein L33 YP_005289592.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005289594.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005289596.1 COG0457 FOG: TPR repeat YP_005289597.1 COG0477 Permeases of the major facilitator superfamily YP_005289598.1 COG0408 Coproporphyrinogen III oxidase YP_005289599.1 COG1981 Predicted membrane protein YP_005289600.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005289601.1 COG0407 Uroporphyrinogen-III decarboxylase