-- dump date 20140620_034931 -- class Genbank::CDS -- table cds_note -- id note YP_005294738.1 COG1806 Uncharacterized protein conserved in bacteria YP_005294739.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005294740.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005294741.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_005294742.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_005294743.1 COG2337 Growth inhibitor YP_005294744.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005294745.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005294746.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005294748.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005294749.1 COG1196 Chromosome segregation ATPases YP_005294752.1 COG0042 tRNA-dihydrouridine synthase YP_005294755.1 COG0802 Predicted ATPase or kinase YP_005294756.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005294757.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005294759.1 COG0658 Predicted membrane metal-binding protein YP_005294764.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005294766.1 COG0457 FOG: TPR repeat YP_005294767.1 COG0711 F0F1-type ATP synthase, subunit b YP_005294768.1 COG0711 F0F1-type ATP synthase, subunit b YP_005294769.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005294770.1 COG0356 F0F1-type ATP synthase, subunit a YP_005294771.1 COG5336 Uncharacterized protein conserved in bacteria YP_005294772.1 COG1651 Protein-disulfide isomerase YP_005294773.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_005294774.1 COG0500 SAM-dependent methyltransferases YP_005294776.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005294777.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_005294779.1 COG0262 Dihydrofolate reductase YP_005294782.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005294783.1 COG1678 Putative transcriptional regulator YP_005294784.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005294791.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005294792.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005294793.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005294795.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005294796.1 COG1398 Fatty-acid desaturase YP_005294797.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005294799.1 COG0360 Ribosomal protein S6 YP_005294800.1 COG0238 Ribosomal protein S18 YP_005294801.1 COG0359 Ribosomal protein L9 YP_005294802.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005294803.1 COG0465 ATP-dependent Zn proteases YP_005294804.1 COG0270 Site-specific DNA methylase YP_005294805.1 COG0270 Site-specific DNA methylase YP_005294806.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005294808.1 COG1565 Uncharacterized conserved protein YP_005294809.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005294811.1 COG0668 Small-conductance mechanosensitive channel YP_005294812.1 COG0706 Preprotein translocase subunit YidC YP_005294813.1 COG0558 Phosphatidylglycerophosphate synthase YP_005294815.1 COG0500 SAM-dependent methyltransferases YP_005294818.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005294819.1 COG3202 ATP/ADP translocase YP_005294820.1 COG2271 Sugar phosphate permease YP_005294821.1 COG0105 Nucleoside diphosphate kinase YP_005294822.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005294823.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005294824.1 COG1192 ATPases involved in chromosome partitioning YP_005294825.1 COG1475 Predicted transcriptional regulators YP_005294826.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005294828.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005294831.1 COG0316 Uncharacterized conserved protein YP_005294832.1 COG0232 dGTP triphosphohydrolase YP_005294833.1 COG0018 Arginyl-tRNA synthetase YP_005294835.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005294838.1 COG0717 Deoxycytidine deaminase YP_005294839.1 COG1952 Preprotein translocase subunit SecB YP_005294840.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005294841.1 COG2904 Uncharacterized protein conserved in bacteria YP_005294842.1 COG3820 Uncharacterized protein conserved in bacteria YP_005294843.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_005294844.1 COG3047 Outer membrane protein W YP_005294845.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005294846.1 COG0477 Permeases of the major facilitator superfamily YP_005294851.1 COG0215 Cysteinyl-tRNA synthetase YP_005294852.1 COG0052 Ribosomal protein S2 YP_005294853.1 COG0264 Translation elongation factor Ts YP_005294856.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005294857.1 COG2121 Uncharacterized protein conserved in bacteria YP_005294858.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005294860.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005294861.1 COG0457 FOG: TPR repeat YP_005294862.1 COG2853 Surface lipoprotein YP_005294863.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_005294864.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005294865.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005294867.1 COG0787 Alanine racemase YP_005294868.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005294869.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005294874.1 COG0457 FOG: TPR repeat YP_005294876.1 COG0227 Ribosomal protein L28 YP_005294877.1 COG0254 Ribosomal protein L31 YP_005294878.1 COG0218 Predicted GTPase YP_005294879.1 COG0548 Acetylglutamate kinase YP_005294880.1 COG3702 Type IV secretory pathway, VirB3 components YP_005294881.1 COG3451 Type IV secretory pathway, VirB4 components YP_005294882.1 COG3704 Type IV secretory pathway, VirB6 components YP_005294883.1 COG3704 Type IV secretory pathway, VirB6 components YP_005294884.1 COG3704 Type IV secretory pathway, VirB6 components YP_005294885.1 COG3704 Type IV secretory pathway, VirB6 components YP_005294886.1 COG3704 Type IV secretory pathway, VirB6 components YP_005294888.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005294889.1 COG0335 Ribosomal protein L19 YP_005294890.1 COG3750 Uncharacterized protein conserved in bacteria YP_005294891.1 COG0341 Preprotein translocase subunit SecF YP_005294892.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_005294893.1 COG0681 Signal peptidase I YP_005294894.1 COG0571 dsRNA-specific ribonuclease YP_005294895.1 COG1159 GTPase YP_005294896.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005294897.1 COG0565 rRNA methylase YP_005294899.1 COG3660 Predicted nucleoside-diphosphate-sugar epimerase YP_005294900.1 COG0489 ATPases involved in chromosome partitioning YP_005294901.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005294902.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005294903.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005294904.1 COG1054 Predicted sulfurtransferase YP_005294905.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005294906.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_005294907.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005294908.1 COG0765 ABC-type amino acid transport system, permease component YP_005294909.1 COG0048 Ribosomal protein S12 YP_005294910.1 COG0049 Ribosomal protein S7 YP_005294911.1 COG0480 Translation elongation factors (GTPases) YP_005294912.1 COG0690 Preprotein translocase subunit SecE YP_005294913.1 COG0250 Transcription antiterminator YP_005294914.1 COG0080 Ribosomal protein L11 YP_005294915.1 COG0081 Ribosomal protein L1 YP_005294916.1 COG0244 Ribosomal protein L10 YP_005294917.1 COG0222 Ribosomal protein L7/L12 YP_005294918.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005294919.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005294920.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005294921.1 COG0260 Leucyl aminopeptidase YP_005294922.1 COG1192 ATPases involved in chromosome partitioning YP_005294924.1 COG0173 Aspartyl-tRNA synthetase YP_005294926.1 COG0670 Integral membrane protein, interacts with FtsH YP_005294927.1 COG0289 Dihydrodipicolinate reductase YP_005294928.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_005294929.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005294930.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005294931.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005294932.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005294934.1 COG0233 Ribosome recycling factor YP_005294935.1 COG0528 Uridylate kinase YP_005294936.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_005294937.1 COG0477 Permeases of the major facilitator superfamily YP_005294938.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005294941.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005294942.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005294943.1 COG0781 Transcription termination factor YP_005294944.1 COG0293 23S rRNA methylase YP_005294947.1 COG2867 Oligoketide cyclase/lipid transport protein YP_005294948.1 COG5508 Uncharacterized conserved small protein YP_005294949.1 COG1385 Uncharacterized protein conserved in bacteria YP_005294950.1 COG2155 Uncharacterized conserved protein YP_005294951.1 COG0841 Cation/multidrug efflux pump YP_005294952.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005294953.1 COG0470 ATPase involved in DNA replication YP_005294954.1 COG0541 Signal recognition particle GTPase YP_005294955.1 COG1505 Serine proteases of the peptidase family S9A YP_005294956.1 COG1505 Serine proteases of the peptidase family S9A YP_005294957.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005294959.1 COG0666 FOG: Ankyrin repeat YP_005294963.1 COG1301 Na+/H+-dicarboxylate symporters YP_005294964.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_005294965.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005294966.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005294968.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005294969.1 COG2317 Zn-dependent carboxypeptidase YP_005294970.1 COG0497 ATPase involved in DNA repair YP_005294971.1 COG4105 DNA uptake lipoprotein YP_005294972.1 COG4572 Putative cation transport regulator YP_005294973.1 COG4572 Putative cation transport regulator YP_005294974.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005294975.1 COG0443 Molecular chaperone YP_005294976.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005294977.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005294980.1 COG1466 DNA polymerase III, delta subunit YP_005294981.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_005294982.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005294985.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005294996.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005294997.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005294998.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_005295000.1 COG0633 Ferredoxin YP_005295001.1 COG0443 Molecular chaperone YP_005295002.1 COG1076 DnaJ-domain-containing proteins 1 YP_005295003.1 COG0164 Ribonuclease HII YP_005295004.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005295005.1 COG0695 Glutaredoxin and related proteins YP_005295006.1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components YP_005295009.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005295011.1 COG1301 Na+/H+-dicarboxylate symporters YP_005295016.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005295017.1 COG0223 Methionyl-tRNA formyltransferase YP_005295018.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005295019.1 COG1485 Predicted ATPase YP_005295021.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005295022.1 COG0666 FOG: Ankyrin repeat YP_005295023.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005295025.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005295026.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005295027.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005295028.1 COG4115 Uncharacterized protein conserved in bacteria YP_005295029.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005295030.1 COG0612 Predicted Zn-dependent peptidases YP_005295031.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_005295033.1 COG0441 Threonyl-tRNA synthetase YP_005295035.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005295036.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005295037.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005295043.1 COG1538 Outer membrane protein YP_005295044.1 COG3827 Uncharacterized protein conserved in bacteria YP_005295046.1 COG0666 FOG: Ankyrin repeat YP_005295047.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005295048.1 COG0793 Periplasmic protease YP_005295049.1 COG0642 Signal transduction histidine kinase YP_005295050.1 COG1729 Uncharacterized protein conserved in bacteria YP_005295052.1 COG1520 FOG: WD40-like repeat YP_005295053.1 COG0102 Ribosomal protein L13 YP_005295054.1 COG0103 Ribosomal protein S9 YP_005295055.1 COG2173 D-alanyl-D-alanine dipeptidase YP_005295057.1 COG2154 Pterin-4a-carbinolamine dehydratase YP_005295058.1 COG0753 Catalase YP_005295060.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005295061.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_005295062.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005295063.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005295065.1 COG0688 Phosphatidylserine decarboxylase YP_005295066.1 COG1183 Phosphatidylserine synthase YP_005295067.1 COG1566 Multidrug resistance efflux pump YP_005295071.1 COG0271 Stress-induced morphogen (activity unknown) YP_005295072.1 COG2200 FOG: EAL domain YP_005295073.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005295074.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005295075.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005295076.1 COG1589 Cell division septal protein YP_005295077.1 COG0849 Actin-like ATPase involved in cell division YP_005295079.1 COG3474 Cytochrome c2 YP_005295081.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005295083.1 COG1530 Ribonucleases G and E YP_005295084.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_005295085.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005295086.1 COG0708 Exonuclease III YP_005295087.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005295088.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005295089.1 COG1217 Predicted membrane GTPase involved in stress response YP_005295092.1 COG2825 Outer membrane protein YP_005295093.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005295094.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_005295095.1 COG1563 Predicted subunit of the Multisubunit Na+/H+ antiporter YP_005295098.1 COG0723 Rieske Fe-S protein YP_005295099.1 COG1290 Cytochrome b subunit of the bc complex YP_005295101.1 COG2857 Cytochrome c1 YP_005295102.1 COG3067 Na+/H+ antiporter YP_005295103.1 COG0071 Molecular chaperone (small heat shock protein) YP_005295105.1 COG4804 Uncharacterized conserved protein YP_005295106.1 COG4804 Uncharacterized conserved protein YP_005295107.1 COG1186 Protein chain release factor B YP_005295108.1 COG0481 Membrane GTPase LepA YP_005295115.1 COG0283 Cytidylate kinase YP_005295117.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005295118.1 COG1694 Predicted pyrophosphatase YP_005295125.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005295126.1 COG0217 Uncharacterized conserved protein YP_005295129.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005295133.1 COG0338 Site-specific DNA methylase YP_005295135.1 COG0500 SAM-dependent methyltransferases YP_005295136.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005295137.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005295139.1 COG0349 Ribonuclease D YP_005295140.1 COG1723 Uncharacterized conserved protein YP_005295141.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_005295143.1 COG0666 FOG: Ankyrin repeat YP_005295144.1 COG0642 Signal transduction histidine kinase YP_005295145.1 COG0642 Signal transduction histidine kinase YP_005295146.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005295147.1 COG0181 Porphobilinogen deaminase YP_005295150.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005295151.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005295153.1 COG0180 Tryptophanyl-tRNA synthetase YP_005295154.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005295155.1 COG5622 Protein required for attachment to host cells YP_005295157.1 COG3077 DNA-damage-inducible protein J YP_005295158.1 COG2945 Predicted hydrolase of the alpha/beta superfamily YP_005295159.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_005295161.1 COG1587 Uroporphyrinogen-III synthase YP_005295162.1 COG1279 Lysine efflux permease YP_005295164.1 COG0477 Permeases of the major facilitator superfamily YP_005295168.1 COG3202 ATP/ADP translocase YP_005295170.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005295171.1 COG0006 Xaa-Pro aminopeptidase YP_005295172.1 COG0531 Amino acid transporters YP_005295173.1 COG0316 Uncharacterized conserved protein YP_005295174.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005295175.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005295176.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005295177.1 COG1959 Predicted transcriptional regulator YP_005295179.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_005295185.1 COG4804 Uncharacterized conserved protein YP_005295186.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005295188.1 COG5628 Predicted acetyltransferase YP_005295189.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005295190.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005295191.1 COG0539 Ribosomal protein S1 YP_005295192.1 COG0283 Cytidylate kinase YP_005295193.1 COG1396 Predicted transcriptional regulators YP_005295199.1 COG3022 Uncharacterized protein conserved in bacteria YP_005295203.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005295204.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005295205.1 COG1158 Transcription termination factor YP_005295206.1 COG0500 SAM-dependent methyltransferases YP_005295207.1 COG0608 Single-stranded DNA-specific exonuclease YP_005295208.1 COG0216 Protein chain release factor A YP_005295209.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005295210.1 COG0290 Translation initiation factor 3 (IF-3) YP_005295211.1 COG5346 Predicted membrane protein YP_005295213.1 COG5449 Uncharacterized conserved protein YP_005295215.1 COG5448 Uncharacterized conserved protein YP_005295216.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005295217.1 COG0605 Superoxide dismutase YP_005295218.1 COG0285 Folylpolyglutamate synthase YP_005295219.1 COG1268 Uncharacterized conserved protein YP_005295220.1 COG4285 Uncharacterized conserved protein YP_005295221.1 COG0625 Glutathione S-transferase YP_005295222.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005295224.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005295225.1 COG4113 Predicted nucleic acid-binding protein, contains PIN domain YP_005295227.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005295228.1 COG1496 Uncharacterized conserved protein YP_005295229.1 COG0174 Glutamine synthetase YP_005295230.1 COG1295 Predicted membrane protein YP_005295231.1 COG1396 Predicted transcriptional regulators YP_005295232.1 COG0460 Homoserine dehydrogenase YP_005295233.1 COG3202 ATP/ADP translocase YP_005295234.1 COG0130 Pseudouridine synthase YP_005295235.1 COG0184 Ribosomal protein S15P/S13E YP_005295236.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005295237.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005295238.1 COG5375 Uncharacterized protein conserved in bacteria YP_005295239.1 COG1934 Uncharacterized protein conserved in bacteria YP_005295240.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005295242.1 COG1109 Phosphomannomutase YP_005295244.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005295245.1 COG1357 Uncharacterized low-complexity proteins YP_005295246.1 COG0208 Ribonucleotide reductase, beta subunit YP_005295247.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005295250.1 COG5430 Uncharacterized secreted protein YP_005295252.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005295253.1 COG3121 P pilus assembly protein, chaperone PapD YP_005295254.1 COG5430 Uncharacterized secreted protein YP_005295256.1 COG0492 Thioredoxin reductase YP_005295257.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005295258.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_005295259.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_005295263.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005295264.1 COG1171 Threonine dehydratase YP_005295267.1 COG0210 Superfamily I DNA and RNA helicases YP_005295268.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005295269.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005295273.1 COG0492 Thioredoxin reductase YP_005295274.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005295275.1 COG0679 Predicted permeases YP_005295276.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005295277.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005295278.1 COG0061 Predicted sugar kinase YP_005295283.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005295284.1 COG1714 Predicted membrane protein/domain YP_005295285.1 COG1238 Predicted membrane protein YP_005295286.1 COG0858 Ribosome-binding factor A YP_005295287.1 COG1835 Predicted acyltransferases YP_005295288.1 COG1835 Predicted acyltransferases YP_005295289.1 COG4395 Uncharacterized protein conserved in bacteria YP_005295290.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_005295293.1 COG2002 Regulators of stationary/sporulation gene expression YP_005295294.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005295295.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_005295296.1 COG1651 Protein-disulfide isomerase YP_005295297.1 COG0691 tmRNA-binding protein YP_005295298.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005295299.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005295300.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005295301.1 COG0642 Signal transduction histidine kinase YP_005295302.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005295303.1 COG0575 CDP-diglyceride synthetase YP_005295304.1 COG2919 Septum formation initiator YP_005295305.1 COG0349 Ribonuclease D YP_005295306.1 COG0495 Leucyl-tRNA synthetase YP_005295310.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005295311.1 COG0073 EMAP domain YP_005295312.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005295313.1 COG0621 2-methylthioadenine synthetase YP_005295314.1 COG0253 Diaminopimelate epimerase YP_005295317.1 COG0438 Glycosyltransferase YP_005295318.1 COG0841 Cation/multidrug efflux pump YP_005295319.1 COG0841 Cation/multidrug efflux pump YP_005295320.1 COG0841 Cation/multidrug efflux pump YP_005295321.1 COG0841 Cation/multidrug efflux pump YP_005295322.1 COG0841 Cation/multidrug efflux pump YP_005295323.1 COG0841 Cation/multidrug efflux pump YP_005295328.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005295329.1 COG0772 Bacterial cell division membrane protein YP_005295330.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005295332.1 COG0597 Lipoprotein signal peptidase YP_005295333.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005295334.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005295335.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005295336.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005295337.1 COG2071 Predicted glutamine amidotransferases YP_005295339.1 COG2887 RecB family exonuclease YP_005295340.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005295342.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005295343.1 COG0756 dUTPase YP_005295344.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005295345.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005295346.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_005295347.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005295349.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005295350.1 COG2917 Intracellular septation protein A YP_005295351.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_005295352.1 COG0797 Lipoproteins YP_005295353.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005295354.1 COG0477 Permeases of the major facilitator superfamily YP_005295355.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005295356.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005295359.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005295361.1 COG3177 Uncharacterized conserved protein YP_005295362.1 COG0442 Prolyl-tRNA synthetase YP_005295363.1 COG0302 GTP cyclohydrolase I YP_005295367.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005295368.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005295369.1 COG3202 ATP/ADP translocase YP_005295371.1 COG0666 FOG: Ankyrin repeat YP_005295372.1 COG0039 Malate/lactate dehydrogenases YP_005295377.1 COG0477 Permeases of the major facilitator superfamily YP_005295378.1 COG2002 Regulators of stationary/sporulation gene expression YP_005295379.1 COG4374 Uncharacterized protein conserved in bacteria YP_005295382.1 COG0281 Malic enzyme YP_005295383.1 COG0679 Predicted permeases YP_005295384.1 COG1384 Lysyl-tRNA synthetase (class I) YP_005295385.1 COG1495 Disulfide bond formation protein DsbB YP_005295388.1 COG0666 FOG: Ankyrin repeat YP_005295390.1 COG1101 ABC-type uncharacterized transport system, ATPase component YP_005295391.1 COG4120 ABC-type uncharacterized transport system, permease component YP_005295392.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_005295393.1 COG3023 Negative regulator of beta-lactamase expression YP_005295395.1 COG0815 Apolipoprotein N-acyltransferase YP_005295396.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005295399.1 COG4974 Site-specific recombinase XerD YP_005295400.1 COG4765 Uncharacterized protein conserved in bacteria YP_005295401.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005295402.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005295403.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005295404.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005295405.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005295406.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_005295407.1 COG0759 Uncharacterized conserved protein YP_005295409.1 COG2094 3-methyladenine DNA glycosylase YP_005295410.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005295411.1 COG1722 Exonuclease VII small subunit YP_005295413.1 COG0806 RimM protein, required for 16S rRNA processing YP_005295414.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_005295415.1 COG0457 FOG: TPR repeat YP_005295417.1 COG1533 DNA repair photolyase YP_005295418.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_005295419.1 COG0522 Ribosomal protein S4 and related proteins YP_005295422.1 COG0438 Glycosyltransferase YP_005295423.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005295425.1 COG0845 Membrane-fusion protein YP_005295426.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005295427.1 COG0500 SAM-dependent methyltransferases YP_005295429.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_005295430.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005295431.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_005295433.1 COG3093 Plasmid maintenance system antidote protein YP_005295434.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005295435.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005295436.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005295437.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005295438.1 COG0450 Peroxiredoxin YP_005295440.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005295441.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005295442.1 COG0550 Topoisomerase IA YP_005295443.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005295446.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_005295447.1 COG1559 Predicted periplasmic solute-binding protein YP_005295449.1 COG0763 Lipid A disaccharide synthetase YP_005295450.1 COG5464 Uncharacterized conserved protein YP_005295453.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005295454.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005295457.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005295458.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005295459.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components YP_005295460.1 COG0845 Membrane-fusion protein YP_005295461.1 COG0477 Permeases of the major facilitator superfamily YP_005295462.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005295464.1 COG0848 Biopolymer transport protein YP_005295465.1 COG0811 Biopolymer transport proteins YP_005295468.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005295470.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005295471.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005295472.1 COG0124 Histidyl-tRNA synthetase YP_005295473.1 COG0531 Amino acid transporters YP_005295474.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005295475.1 COG0457 FOG: TPR repeat YP_005295476.1 COG3175 Cytochrome oxidase assembly factor YP_005295477.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005295478.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005295479.1 COG1351 Predicted alternative thymidylate synthase YP_005295480.1 COG1451 Predicted metal-dependent hydrolase YP_005295481.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005295482.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005295483.1 COG0249 Mismatch repair ATPase (MutS family) YP_005295484.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_005295493.1 COG0248 Exopolyphosphatase YP_005295494.1 COG3505 Type IV secretory pathway, VirD4 components YP_005295495.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005295496.1 COG2948 Type IV secretory pathway, VirB10 components YP_005295497.1 COG3504 Type IV secretory pathway, VirB9 components YP_005295498.1 COG3736 Type IV secretory pathway, component VirB8 YP_005295500.1 COG3736 Type IV secretory pathway, component VirB8 YP_005295501.1 COG3504 Type IV secretory pathway, VirB9 components YP_005295502.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_005295503.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005295504.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005295506.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005295507.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005295508.1 COG1770 Protease II YP_005295509.1 COG0772 Bacterial cell division membrane protein YP_005295511.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005295515.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005295517.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005295519.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005295520.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005295522.1 COG0305 Replicative DNA helicase YP_005295524.1 COG0814 Amino acid permeases YP_005295525.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005295526.1 COG1357 Uncharacterized low-complexity proteins YP_005295527.1 COG0742 N6-adenine-specific methylase YP_005295528.1 COG1066 Predicted ATP-dependent serine protease YP_005295529.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005295530.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_005295532.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005295534.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005295535.1 COG0195 Transcription elongation factor YP_005295536.1 COG0779 Uncharacterized protein conserved in bacteria YP_005295539.1 COG1959 Predicted transcriptional regulator YP_005295540.1 COG1189 Predicted rRNA methylase YP_005295541.1 COG0162 Tyrosyl-tRNA synthetase YP_005295543.1 COG5304 Uncharacterized protein conserved in bacteria YP_005295546.1 COG3547 Transposase and inactivated derivatives YP_005295549.1 COG1672 Predicted ATPase (AAA+ superfamily) YP_005295550.1 COG0477 Permeases of the major facilitator superfamily YP_005295551.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005295552.1 COG1040 Predicted amidophosphoribosyltransferases YP_005295559.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005295560.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_005295561.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005295562.1 COG1357 Uncharacterized low-complexity proteins YP_005295564.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005295566.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005295568.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005295569.1 COG2001 Uncharacterized protein conserved in bacteria YP_005295571.1 COG0591 Na+/proline symporter YP_005295573.1 COG0322 Nuclease subunit of the excinuclease complex YP_005295574.1 COG2847 Uncharacterized protein conserved in bacteria YP_005295575.1 COG4912 Predicted DNA alkylation repair enzyme YP_005295576.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005295577.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005295578.1 COG2169 Adenosine deaminase YP_005295579.1 COG2169 Adenosine deaminase YP_005295580.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005295587.1 COG0666 FOG: Ankyrin repeat YP_005295588.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005295589.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005295590.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005295591.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005295592.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005295593.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005295594.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005295595.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005295597.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005295601.1 COG4710 Predicted DNA-binding protein with an HTH domain YP_005295603.1 COG1862 Preprotein translocase subunit YajC YP_005295604.1 COG0342 Preprotein translocase subunit SecD YP_005295605.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005295606.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_005295607.1 COG0221 Inorganic pyrophosphatase YP_005295608.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005295610.1 COG1200 RecG-like helicase YP_005295611.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005295612.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005295613.1 COG0655 Multimeric flavodoxin WrbA YP_005295614.1 COG0655 Multimeric flavodoxin WrbA YP_005295616.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005295617.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005295618.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005295619.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005295620.1 COG2938 Uncharacterized conserved protein YP_005295621.1 COG0607 Rhodanese-related sulfurtransferase YP_005295622.1 COG0593 ATPase involved in DNA replication initiation YP_005295628.1 COG3621 Patatin YP_005295631.1 COG0477 Permeases of the major facilitator superfamily YP_005295633.1 COG1708 Predicted nucleotidyltransferases YP_005295634.1 COG0012 Predicted GTPase, probable translation factor YP_005295635.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005295637.1 COG0193 Peptidyl-tRNA hydrolase YP_005295638.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005295639.1 COG0602 Organic radical activating enzymes YP_005295640.1 COG0291 Ribosomal protein L35 YP_005295641.1 COG0292 Ribosomal protein L20 YP_005295642.1 COG0230 Ribosomal protein L34 YP_005295647.1 COG0598 Mg2+ and Co2+ transporters YP_005295651.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005295652.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005295653.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_005295655.1 COG0828 Ribosomal protein S21 YP_005295656.1 COG5590 Uncharacterized conserved protein YP_005295660.1 COG0060 Isoleucyl-tRNA synthetase YP_005295664.1 COG1729 Uncharacterized protein conserved in bacteria YP_005295666.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_005295667.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005295669.1 COG0477 Permeases of the major facilitator superfamily YP_005295670.1 COG3070 Regulator of competence-specific genes YP_005295671.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005295672.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_005295673.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005295674.1 COG5342 Invasion protein B, involved in pathogenesis YP_005295676.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005295677.1 COG0234 Co-chaperonin GroES (HSP10) YP_005295680.1 COG0689 RNase PH YP_005295681.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005295682.1 COG0628 Predicted permease YP_005295683.1 COG0593 ATPase involved in DNA replication initiation YP_005295684.1 COG0477 Permeases of the major facilitator superfamily YP_005295689.1 COG0477 Permeases of the major facilitator superfamily YP_005295691.1 COG0268 Ribosomal protein S20 YP_005295692.1 COG0203 Ribosomal protein L17 YP_005295693.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005295694.1 COG0100 Ribosomal protein S11 YP_005295695.1 COG0099 Ribosomal protein S13 YP_005295696.1 COG0563 Adenylate kinase and related kinases YP_005295697.1 COG0201 Preprotein translocase subunit SecY YP_005295698.1 COG0200 Ribosomal protein L15 YP_005295699.1 COG1841 Ribosomal protein L30/L7E YP_005295700.1 COG0098 Ribosomal protein S5 YP_005295701.1 COG0256 Ribosomal protein L18 YP_005295702.1 COG0097 Ribosomal protein L6P/L9E YP_005295703.1 COG0096 Ribosomal protein S8 YP_005295704.1 COG0199 Ribosomal protein S14 YP_005295705.1 COG0094 Ribosomal protein L5 YP_005295706.1 COG0198 Ribosomal protein L24 YP_005295707.1 COG0093 Ribosomal protein L14 YP_005295708.1 COG0186 Ribosomal protein S17 YP_005295709.1 COG0255 Ribosomal protein L29 YP_005295710.1 COG0197 Ribosomal protein L16/L10E YP_005295711.1 COG0092 Ribosomal protein S3 YP_005295712.1 COG0091 Ribosomal protein L22 YP_005295713.1 COG0185 Ribosomal protein S19 YP_005295714.1 COG0090 Ribosomal protein L2 YP_005295715.1 COG0089 Ribosomal protein L23 YP_005295716.1 COG0088 Ribosomal protein L4 YP_005295717.1 COG0087 Ribosomal protein L3 YP_005295718.1 COG0051 Ribosomal protein S10 YP_005295720.1 COG0050 GTPases - translation elongation factors YP_005295721.1 COG0566 rRNA methylases YP_005295723.1 COG0114 Fumarase YP_005295724.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_005295726.1 COG0206 Cell division GTPase YP_005295728.1 COG4574 Serine protease inhibitor ecotin YP_005295729.1 COG0694 Thioredoxin-like proteins and domains YP_005295730.1 COG0477 Permeases of the major facilitator superfamily YP_005295731.1 COG0513 Superfamily II DNA and RNA helicases YP_005295732.1 COG1278 Cold shock proteins YP_005295733.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005295734.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005295735.1 COG1452 Organic solvent tolerance protein OstA YP_005295736.1 COG1570 Exonuclease VII, large subunit YP_005295738.1 COG0708 Exonuclease III YP_005295739.1 COG4095 Uncharacterized conserved protein YP_005295740.1 COG1160 Predicted GTPases YP_005295741.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005295744.1 COG0661 Predicted unusual protein kinase YP_005295745.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005295746.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_005295747.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_005295751.1 COG2958 Uncharacterized protein conserved in bacteria YP_005295754.1 COG2958 Uncharacterized protein conserved in bacteria YP_005295755.1 COG0084 Mg-dependent DNase YP_005295756.1 COG0143 Methionyl-tRNA synthetase YP_005295757.1 COG0125 Thymidylate kinase YP_005295758.1 COG0477 Permeases of the major facilitator superfamily YP_005295759.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005295760.1 COG0525 Valyl-tRNA synthetase YP_005295761.1 COG3475 LPS biosynthesis protein YP_005295762.1 COG3475 LPS biosynthesis protein YP_005295763.1 COG1322 Uncharacterized protein conserved in bacteria YP_005295765.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005295768.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005295769.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005295770.1 COG0603 Predicted PP-loop superfamily ATPase YP_005295771.1 COG1598 Uncharacterized conserved protein YP_005295773.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005295775.1 COG0477 Permeases of the major facilitator superfamily YP_005295776.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005295777.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005295779.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_005295780.1 COG1138 Cytochrome c biogenesis factor YP_005295782.1 COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain YP_005295783.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005295784.1 COG1472 Beta-glucosidase-related glycosidases YP_005295785.1 COG0789 Predicted transcriptional regulators YP_005295786.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005295788.1 COG1225 Peroxiredoxin YP_005295789.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005295790.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005295791.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005295792.1 COG2961 Protein involved in catabolism of external DNA YP_005295793.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005295795.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005295796.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005295799.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005295800.1 COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_005295801.1 COG0328 Ribonuclease HI YP_005295802.1 COG3814 Uncharacterized protein conserved in bacteria YP_005295803.1 COG3494 Uncharacterized protein conserved in bacteria YP_005295804.1 COG0237 Dephospho-CoA kinase YP_005295805.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005295806.1 COG3346 Uncharacterized conserved protein YP_005295807.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005295810.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005295819.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_005295820.1 COG3202 ATP/ADP translocase YP_005295821.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005295824.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005295825.1 COG0319 Predicted metal-dependent hydrolase YP_005295828.1 COG0320 Lipoate synthase YP_005295829.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005295830.1 COG0400 Predicted esterase YP_005295831.1 COG0278 Glutaredoxin-related protein YP_005295832.1 COG0177 Predicted EndoIII-related endonuclease YP_005295837.1 COG5510 Predicted small secreted protein YP_005295840.1 COG0313 Predicted methyltransferases YP_005295841.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_005295842.1 COG1826 Sec-independent protein secretion pathway components YP_005295843.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005295844.1 COG0261 Ribosomal protein L21 YP_005295845.1 COG0211 Ribosomal protein L27 YP_005295846.1 COG0527 Aspartokinases YP_005295847.1 COG1396 Predicted transcriptional regulators YP_005295848.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005295849.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005295852.1 COG0477 Permeases of the major facilitator superfamily YP_005295853.1 COG3027 Uncharacterized protein conserved in bacteria YP_005295855.1 COG1426 Uncharacterized protein conserved in bacteria YP_005295856.1 COG2902 NAD-specific glutamate dehydrogenase YP_005295857.1 COG0486 Predicted GTPase YP_005295859.1 COG0477 Permeases of the major facilitator superfamily YP_005295861.1 COG0468 RecA/RadA recombinase YP_005295862.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005295863.1 COG0236 Acyl carrier protein YP_005295864.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005295865.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005295868.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005295869.1 COG0194 Guanylate kinase YP_005295870.1 COG1396 Predicted transcriptional regulators YP_005295871.1 COG1792 Cell shape-determining protein YP_005295872.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005295873.1 COG0795 Predicted permeases YP_005295874.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005295876.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005295877.1 COG0333 Ribosomal protein L32 YP_005295878.1 COG2913 Small protein A (tmRNA-binding) YP_005295879.1 COG0552 Signal recognition particle GTPase YP_005295880.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005295881.1 COG0192 S-adenosylmethionine synthetase YP_005295882.1 COG0192 S-adenosylmethionine synthetase YP_005295883.1 COG0192 S-adenosylmethionine synthetase YP_005295887.1 COG0587 DNA polymerase III, alpha subunit YP_005295888.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005295890.1 COG0477 Permeases of the major facilitator superfamily YP_005295891.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005295892.1 COG0172 Seryl-tRNA synthetase YP_005295894.1 COG3451 Type IV secretory pathway, VirB4 components YP_005295896.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005295897.1 COG3637 Opacity protein and related surface antigens YP_005295898.1 COG0500 SAM-dependent methyltransferases YP_005295900.1 COG2944 Predicted transcriptional regulator YP_005295901.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005295902.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005295903.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005295904.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005295905.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_005295906.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005295907.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005295908.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005295909.1 COG3671 Predicted membrane protein YP_005295910.1 COG1048 Aconitase A YP_005295911.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005295912.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005295913.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005295914.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005295915.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005295916.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005295917.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005295919.1 COG2602 Beta-lactamase class D YP_005295920.1 COG2602 Beta-lactamase class D YP_005295921.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_005295922.1 COG0621 2-methylthioadenine synthetase YP_005295928.1 COG3807 Uncharacterized protein conserved in bacteria YP_005295929.1 COG0475 Kef-type K+ transport systems, membrane components YP_005295930.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005295931.1 COG0271 Stress-induced morphogen (activity unknown) YP_005295938.1 COG0361 Translation initiation factor 1 (IF-1) YP_005295939.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005295940.1 COG1734 DnaK suppressor protein YP_005295941.1 COG0582 Integrase YP_005295943.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005295945.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_005295946.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005295947.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005295949.1 COG1140 Nitrate reductase beta subunit YP_005295951.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005295952.1 COG1835 Predicted acyltransferases YP_005295953.1 COG0024 Methionine aminopeptidase YP_005295954.1 COG2003 DNA repair proteins YP_005295955.1 COG2003 DNA repair proteins YP_005295956.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005295958.1 COG3637 Opacity protein and related surface antigens YP_005295959.1 COG3637 Opacity protein and related surface antigens YP_005295960.1 COG1146 Ferredoxin YP_005295961.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005295962.1 COG0590 Cytosine/adenosine deaminases YP_005295963.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005295964.1 COG4520 Surface antigen YP_005295965.1 COG1881 Phospholipid-binding protein YP_005295966.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005295970.1 COG0178 Excinuclease ATPase subunit YP_005295971.1 COG0629 Single-stranded DNA-binding protein YP_005295975.1 COG1872 Uncharacterized conserved protein YP_005295976.1 COG0326 Molecular chaperone, HSP90 family YP_005295977.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005295980.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005295981.1 COG0536 Predicted GTPase YP_005295982.1 COG0372 Citrate synthase YP_005295984.1 COG1573 Uracil-DNA glycosylase YP_005295985.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005295988.1 COG2890 Methylase of polypeptide chain release factors YP_005295989.1 COG0009 Putative translation factor (SUA5) YP_005295990.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005295991.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005295992.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005295993.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005295994.1 COG1636 Uncharacterized protein conserved in bacteria YP_005295996.1 COG1474 Cdc6-related protein, AAA superfamily ATPase YP_005295998.1 COG0013 Alanyl-tRNA synthetase YP_005295999.1 COG0101 Pseudouridylate synthase YP_005296000.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005296001.1 COG0358 DNA primase (bacterial type) YP_005296002.1 COG0170 Dolichol kinase YP_005296003.1 COG0782 Transcription elongation factor YP_005296004.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_005296005.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_005296006.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005296007.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005296008.1 COG0718 Uncharacterized protein conserved in bacteria YP_005296011.1 COG3577 Predicted aspartyl protease YP_005296017.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005296018.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005296019.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005296020.1 COG0671 Membrane-associated phospholipid phosphatase YP_005296021.1 COG3077 DNA-damage-inducible protein J YP_005296022.1 COG3041 Uncharacterized protein conserved in bacteria YP_005296023.1 COG0795 Predicted permeases YP_005296024.1 COG2927 DNA polymerase III, chi subunit YP_005296026.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005296031.1 COG1434 Uncharacterized conserved protein YP_005296032.1 COG0321 Lipoate-protein ligase B YP_005296033.1 COG3023 Negative regulator of beta-lactamase expression YP_005296034.1 COG0228 Ribosomal protein S16 YP_005296035.1 COG0267 Ribosomal protein L33 YP_005296036.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005296038.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005296040.1 COG0457 FOG: TPR repeat YP_005296041.1 COG0477 Permeases of the major facilitator superfamily YP_005296042.1 COG0408 Coproporphyrinogen III oxidase YP_005296043.1 COG1981 Predicted membrane protein YP_005296044.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005296045.1 COG0407 Uroporphyrinogen-III decarboxylase