-- dump date 20140620_040846 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 357808000001 SEQ_END SEQ_END NC_009523.1 5801598 5801598 DR NC_009523.1; contig end 5801598..5801598 Roseiflexus sp. RS-1 YP_001274394.1 CDS dnaA NC_009523.1 415 1860 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 415..1860 Roseiflexus sp. RS-1 5211616 YP_001274395.1 CDS RoseRS_0002 NC_009523.1 2021 3196 D PFAM: class II aldolase/adducin family protein; class II aldolase/adducin family protein 2021..3196 Roseiflexus sp. RS-1 5206935 YP_001274396.1 CDS RoseRS_0003 NC_009523.1 3243 3956 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3243..3956 Roseiflexus sp. RS-1 5206936 YP_001274397.1 CDS RoseRS_0004 NC_009523.1 4002 4865 R hypothetical protein complement(4002..4865) Roseiflexus sp. RS-1 5206937 YP_001274398.1 CDS RoseRS_0005 NC_009523.1 5453 6856 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NADP(+) reductase complement(5453..6856) Roseiflexus sp. RS-1 5206938 YP_001274399.1 CDS RoseRS_0006 NC_009523.1 7035 7766 R hypothetical protein complement(7035..7766) Roseiflexus sp. RS-1 5206939 YP_001274400.1 CDS RoseRS_0007 NC_009523.1 7768 8286 R hypothetical protein complement(7768..8286) Roseiflexus sp. RS-1 5206940 YP_001274401.1 CDS RoseRS_0008 NC_009523.1 8314 9039 R PFAM: Phosphoglycerate mutase; phosphoglycerate mutase complement(8314..9039) Roseiflexus sp. RS-1 5206941 YP_001274402.1 CDS RoseRS_0009 NC_009523.1 9360 10886 D PFAM: deoxyribodipyrimidine photolyase-related protein; deoxyribodipyrimidine photolyase-like protein 9360..10886 Roseiflexus sp. RS-1 5206942 YP_001274403.1 CDS RoseRS_0010 NC_009523.1 11402 13084 D PFAM: WD40 domain protein beta Propeller; WD40 domain-containing protein 11402..13084 Roseiflexus sp. RS-1 5206943 YP_001274404.1 CDS RoseRS_0011 NC_009523.1 13336 14148 D deoxyribodipyrimidine photolyase-like protein 13336..14148 Roseiflexus sp. RS-1 5206944 YP_001274405.1 CDS RoseRS_0012 NC_009523.1 14156 15151 D PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 14156..15151 Roseiflexus sp. RS-1 5206945 YP_001274406.1 CDS RoseRS_0013 NC_009523.1 15231 15686 D hypothetical protein 15231..15686 Roseiflexus sp. RS-1 5206946 YP_001274407.1 CDS RoseRS_0014 NC_009523.1 15683 17470 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase catalytic subunit 15683..17470 Roseiflexus sp. RS-1 5206947 YP_001274408.1 CDS RoseRS_0015 NC_009523.1 18072 18938 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(18072..18938) Roseiflexus sp. RS-1 5206948 YP_001274409.1 CDS RoseRS_0016 NC_009523.1 18954 19379 R hypothetical protein complement(18954..19379) Roseiflexus sp. RS-1 5206949 YP_001274410.1 CDS RoseRS_0017 NC_009523.1 19469 20176 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(19469..20176) Roseiflexus sp. RS-1 5206950 YP_001274411.1 CDS RoseRS_0018 NC_009523.1 20290 20595 D hypothetical protein 20290..20595 Roseiflexus sp. RS-1 5206951 YP_001274412.1 CDS RoseRS_0019 NC_009523.1 21474 21662 D hypothetical protein 21474..21662 Roseiflexus sp. RS-1 5206952 YP_001274413.1 CDS RoseRS_0020 NC_009523.1 21659 21970 D hypothetical protein 21659..21970 Roseiflexus sp. RS-1 5206953 YP_001274414.1 CDS RoseRS_0021 NC_009523.1 21970 22200 D hypothetical protein 21970..22200 Roseiflexus sp. RS-1 5206954 YP_001274415.1 CDS RoseRS_0022 NC_009523.1 22266 22517 D hypothetical protein 22266..22517 Roseiflexus sp. RS-1 5206955 YP_001274416.1 CDS RoseRS_0023 NC_009523.1 22552 24036 R TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; o-succinylbenzoate--CoA ligase complement(22552..24036) Roseiflexus sp. RS-1 5206956 YP_001274417.1 CDS RoseRS_0024 NC_009523.1 24033 24896 R TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; naphthoate synthase complement(24033..24896) Roseiflexus sp. RS-1 5206957 YP_001274418.1 CDS RoseRS_0025 NC_009523.1 25063 26814 R TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase complement(25063..26814) Roseiflexus sp. RS-1 5206958 YP_001274419.1 CDS RoseRS_0026 NC_009523.1 26915 28282 R TIGRFAM: isochorismate synthase; PFAM: Anthranilate synthase component I and chorismate binding protein; isochorismate synthase complement(26915..28282) Roseiflexus sp. RS-1 5206959 YP_001274420.1 CDS RoseRS_0027 NC_009523.1 28272 28901 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(28272..28901) Roseiflexus sp. RS-1 5206960 YP_001274421.1 CDS RoseRS_0028 NC_009523.1 29106 30236 D hypothetical protein 29106..30236 Roseiflexus sp. RS-1 5206961 YP_001274422.1 CDS RoseRS_0029 NC_009523.1 31039 31383 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(31039..31383) Roseiflexus sp. RS-1 5206962 YP_001274423.1 CDS RoseRS_0030 NC_009523.1 31373 31807 R PFAM: ATP-binding region, ATPase domain protein domain protein; putative anti-sigma regulatory factor complement(31373..31807) Roseiflexus sp. RS-1 5206963 YP_001274424.1 CDS RoseRS_0031 NC_009523.1 31829 33397 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(31829..33397) Roseiflexus sp. RS-1 5206964 YP_001274425.1 CDS RoseRS_0032 NC_009523.1 33506 34603 R PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; stage II sporulation E family protein complement(33506..34603) Roseiflexus sp. RS-1 5206965 YP_001274426.1 CDS RoseRS_0033 NC_009523.1 34610 36082 R PFAM: MCP methyltransferase, CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; protein-glutamate O-methyltransferase complement(34610..36082) Roseiflexus sp. RS-1 5206966 YP_001274427.1 CDS RoseRS_0034 NC_009523.1 36306 37454 R PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase complement(36306..37454) Roseiflexus sp. RS-1 5206967 YP_001274428.1 CDS RoseRS_0035 NC_009523.1 37620 37982 R PFAM: response regulator receiver; response regulator receiver protein complement(37620..37982) Roseiflexus sp. RS-1 5206968 YP_001274429.1 CDS RoseRS_0036 NC_009523.1 38053 40281 R PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase complement(38053..40281) Roseiflexus sp. RS-1 5206969 YP_001274430.1 CDS RoseRS_0037 NC_009523.1 40342 41847 R PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(40342..41847) Roseiflexus sp. RS-1 5206970 YP_001274431.1 CDS RoseRS_0038 NC_009523.1 41856 42272 R hypothetical protein complement(41856..42272) Roseiflexus sp. RS-1 5206971 YP_001274432.1 CDS RoseRS_0039 NC_009523.1 42595 43059 R PFAM: CheW domain protein; putative CheW protein complement(42595..43059) Roseiflexus sp. RS-1 5206972 YP_001274433.1 CDS RoseRS_0040 NC_009523.1 43467 45119 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 43467..45119 Roseiflexus sp. RS-1 5206973 YP_001274434.1 CDS RoseRS_0041 NC_009523.1 45116 46900 D TIGRFAM: ABC transporter, transmembrane region, type 1; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter transmembrane region, type 1 45116..46900 Roseiflexus sp. RS-1 5206974 YP_001274435.1 CDS RoseRS_0042 NC_009523.1 46897 47316 D PFAM: protein of unknown function DUF454; hypothetical protein 46897..47316 Roseiflexus sp. RS-1 5206975 YP_001274436.1 CDS RoseRS_0043 NC_009523.1 47351 48706 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(47351..48706) Roseiflexus sp. RS-1 5206976 YP_001274437.1 CDS RoseRS_0044 NC_009523.1 48909 50042 D hypothetical protein 48909..50042 Roseiflexus sp. RS-1 5206977 YP_001274438.1 CDS RoseRS_0045 NC_009523.1 50360 52096 R GTPase subunit of restriction endonuclease-like protein complement(50360..52096) Roseiflexus sp. RS-1 5206978 YP_001274439.1 CDS RoseRS_0046 NC_009523.1 52288 53253 D hypothetical protein 52288..53253 Roseiflexus sp. RS-1 5206979 YP_001274440.1 CDS RoseRS_0047 NC_009523.1 53374 55311 D TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 53374..55311 Roseiflexus sp. RS-1 5206980 YP_001274441.1 CDS RoseRS_0048 NC_009523.1 55517 56149 R PFAM: isochorismatase hydrolase; isochorismatase hydrolase complement(55517..56149) Roseiflexus sp. RS-1 5206981 YP_001274442.1 CDS RoseRS_0049 NC_009523.1 56429 57343 R PFAM: pyruvate carboxyltransferase; pyruvate carboxyltransferase complement(56429..57343) Roseiflexus sp. RS-1 5206982 YP_001274443.1 CDS RoseRS_0050 NC_009523.1 57347 58561 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase complement(57347..58561) Roseiflexus sp. RS-1 5206983 YP_001274444.1 CDS RoseRS_0051 NC_009523.1 58619 59302 R PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator complement(58619..59302) Roseiflexus sp. RS-1 5206984 YP_001274445.1 CDS RoseRS_0052 NC_009523.1 59755 60903 R PFAM: peptidase M23B; peptidase M23B complement(59755..60903) Roseiflexus sp. RS-1 5206985 YP_001274446.1 CDS RoseRS_0053 NC_009523.1 61097 62230 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(61097..62230) Roseiflexus sp. RS-1 5206986 YP_001274447.1 CDS RoseRS_0054 NC_009523.1 62514 62789 D hypothetical protein 62514..62789 Roseiflexus sp. RS-1 5206987 YP_001274448.1 CDS RoseRS_0055 NC_009523.1 62752 64767 R PFAM: UvrD/REP helicase; UvrD/REP helicase complement(62752..64767) Roseiflexus sp. RS-1 5206988 YP_001274449.1 CDS RoseRS_0056 NC_009523.1 64812 66632 R SMART: AAA ATPase; ATPase AAA complement(64812..66632) Roseiflexus sp. RS-1 5206989 YP_001274450.1 CDS RoseRS_0057 NC_009523.1 67267 67584 R hypothetical protein complement(67267..67584) Roseiflexus sp. RS-1 5206990 YP_001274451.1 CDS RoseRS_0058 NC_009523.1 67831 68478 D PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 67831..68478 Roseiflexus sp. RS-1 5206991 YP_001274452.1 CDS RoseRS_0059 NC_009523.1 68475 69080 D SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 68475..69080 Roseiflexus sp. RS-1 5206992 YP_001274453.1 CDS RoseRS_0060 NC_009523.1 69077 72610 D PFAM: UvrD/REP helicase; protein of unknown function DUF955; UvrD/REP helicase 69077..72610 Roseiflexus sp. RS-1 5206993 YP_001274454.1 CDS RoseRS_0061 NC_009523.1 72627 73091 R hypothetical protein complement(72627..73091) Roseiflexus sp. RS-1 5206994 YP_001274455.1 CDS RoseRS_0062 NC_009523.1 73133 74143 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(73133..74143) Roseiflexus sp. RS-1 5206995 YP_001274456.1 CDS RoseRS_0063 NC_009523.1 74133 77705 R PFAM: transcriptional regulator domain protein; transcriptional activator domain; transcriptional regulator complement(74133..77705) Roseiflexus sp. RS-1 5206996 YP_001274457.1 CDS RoseRS_0064 NC_009523.1 78141 81905 D TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; Vitamin B12 dependent methionine synthase, activation region; cobalamin B12-binding domain protein; methionine synthase 78141..81905 Roseiflexus sp. RS-1 5206997 YP_001274458.1 CDS RoseRS_0065 NC_009523.1 81916 83046 D secreted hydrolase-like protein 81916..83046 Roseiflexus sp. RS-1 5206998 YP_001274459.1 CDS RoseRS_0066 NC_009523.1 83335 83721 D PFAM: thioesterase superfamily protein; thioesterase superfamily protein 83335..83721 Roseiflexus sp. RS-1 5206999 YP_001274460.1 CDS RoseRS_0068 NC_009523.1 84282 85475 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein 84282..85475 Roseiflexus sp. RS-1 5207001 YP_001274461.1 CDS RoseRS_0070 NC_009523.1 86495 86917 R hypothetical protein complement(86495..86917) Roseiflexus sp. RS-1 5207003 YP_001274462.1 CDS RoseRS_0071 NC_009523.1 86918 87148 R hypothetical protein complement(86918..87148) Roseiflexus sp. RS-1 5207004 YP_001274463.1 CDS RoseRS_0072 NC_009523.1 87519 88481 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 87519..88481 Roseiflexus sp. RS-1 5207005 YP_001274464.1 CDS RoseRS_0073 NC_009523.1 88533 88871 R PFAM: protein of unknown function DUF86; hypothetical protein complement(88533..88871) Roseiflexus sp. RS-1 5207006 YP_001274465.1 CDS RoseRS_0074 NC_009523.1 88876 89379 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(88876..89379) Roseiflexus sp. RS-1 5207007 YP_001274466.1 CDS RoseRS_0075 NC_009523.1 89494 89910 R PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein complement(89494..89910) Roseiflexus sp. RS-1 5207008 YP_001274467.1 CDS RoseRS_0076 NC_009523.1 89941 91683 R PFAM: helix-hairpin-helix motif; PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; phosphotransferase domain-containing protein complement(89941..91683) Roseiflexus sp. RS-1 5207009 YP_001274468.1 CDS greA NC_009523.1 92146 92619 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 92146..92619 Roseiflexus sp. RS-1 5207010 YP_001274469.1 CDS lysS NC_009523.1 92787 94256 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 92787..94256 Roseiflexus sp. RS-1 5207011 YP_001274470.1 CDS RoseRS_0079 NC_009523.1 94303 94539 D hypothetical protein 94303..94539 Roseiflexus sp. RS-1 5207012 YP_001274471.1 CDS RoseRS_0080 NC_009523.1 94747 95130 D TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; death-on-curing family protein 94747..95130 Roseiflexus sp. RS-1 5207013 YP_001274472.1 CDS RoseRS_0081 NC_009523.1 95156 96094 D PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 95156..96094 Roseiflexus sp. RS-1 5207014 YP_001274473.1 CDS RoseRS_0082 NC_009523.1 96325 97620 D PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 96325..97620 Roseiflexus sp. RS-1 5207015 YP_001274474.1 CDS RoseRS_0083 NC_009523.1 98048 98383 D hypothetical protein 98048..98383 Roseiflexus sp. RS-1 5207016 YP_001274475.1 CDS RoseRS_0084 NC_009523.1 98370 98693 D PFAM: HEPN domain protein; HEPN domain-containing protein 98370..98693 Roseiflexus sp. RS-1 5207017 YP_001274476.1 CDS RoseRS_0085 NC_009523.1 99040 99429 D PFAM: HEPN domain protein; HEPN domain-containing protein 99040..99429 Roseiflexus sp. RS-1 5207018 YP_001274477.1 CDS RoseRS_0086 NC_009523.1 99434 99736 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 99434..99736 Roseiflexus sp. RS-1 5207019 YP_001274478.1 CDS RoseRS_0087 NC_009523.1 99758 100096 R hypothetical protein complement(99758..100096) Roseiflexus sp. RS-1 5207020 YP_001274479.1 CDS RoseRS_0088 NC_009523.1 100102 101448 R PFAM: amine oxidase; FAD dependent oxidoreductase; hypothetical protein complement(100102..101448) Roseiflexus sp. RS-1 5207021 YP_001274480.1 CDS RoseRS_0089 NC_009523.1 101445 102497 R PFAM: conserved hypothetical protein 374; hypothetical protein complement(101445..102497) Roseiflexus sp. RS-1 5207022 YP_001274481.1 CDS RoseRS_0090 NC_009523.1 103222 103860 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(103222..103860) Roseiflexus sp. RS-1 5207023 YP_001274482.1 CDS RoseRS_0091 NC_009523.1 104234 108073 R TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(104234..108073) Roseiflexus sp. RS-1 5207024 YP_001274483.1 CDS RoseRS_0092 NC_009523.1 108462 109415 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 108462..109415 Roseiflexus sp. RS-1 5207025 YP_001274484.1 CDS RoseRS_0093 NC_009523.1 109432 111246 R PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(109432..111246) Roseiflexus sp. RS-1 5207026 YP_001274485.1 CDS RoseRS_0094 NC_009523.1 111358 112704 D PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M20 111358..112704 Roseiflexus sp. RS-1 5207027 YP_001274486.1 CDS RoseRS_0095 NC_009523.1 112701 114245 D hypothetical protein 112701..114245 Roseiflexus sp. RS-1 5207028 YP_001274487.1 CDS RoseRS_0096 NC_009523.1 114369 115622 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; molybdenum cofactor synthesis domain-containing protein complement(114369..115622) Roseiflexus sp. RS-1 5207029 YP_001274488.1 CDS RoseRS_0097 NC_009523.1 115644 116606 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase complement(115644..116606) Roseiflexus sp. RS-1 5207030 YP_001274489.1 CDS RoseRS_0098 NC_009523.1 116761 118578 D hypothetical protein 116761..118578 Roseiflexus sp. RS-1 5207031 YP_001274490.1 CDS RoseRS_0099 NC_009523.1 118560 119633 D PFAM: ROK family protein; ROK family protein 118560..119633 Roseiflexus sp. RS-1 5207032 YP_001274491.1 CDS RoseRS_0100 NC_009523.1 119781 121622 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; GTP-binding protein TypA 119781..121622 Roseiflexus sp. RS-1 5207033 YP_001274492.1 CDS RoseRS_0101 NC_009523.1 121916 122973 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(121916..122443,122443..122973)) Roseiflexus sp. RS-1 5207034 YP_001274493.1 CDS RoseRS_0103 NC_009523.1 123422 123688 R PFAM: acyl-coA-binding protein, ACBP; acyl-CoA-binding protein complement(123422..123688) Roseiflexus sp. RS-1 5207036 YP_001274494.1 CDS RoseRS_0104 NC_009523.1 123692 124669 R PFAM: peptidase T2, asparaginase 2; asparaginase complement(123692..124669) Roseiflexus sp. RS-1 5207037 YP_001274495.1 CDS RoseRS_0105 NC_009523.1 124703 125269 R PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(124703..125269) Roseiflexus sp. RS-1 5207038 YP_001274496.1 CDS RoseRS_0106 NC_009523.1 125269 125991 R hypothetical protein complement(125269..125991) Roseiflexus sp. RS-1 5207039 YP_001274497.1 CDS RoseRS_0107 NC_009523.1 126007 126735 R hypothetical protein complement(126007..126735) Roseiflexus sp. RS-1 5207040 YP_001274498.1 CDS RoseRS_0108 NC_009523.1 126770 127945 R TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; competence/damage-inducible protein CinA complement(126770..127945) Roseiflexus sp. RS-1 5207041 YP_001274499.1 CDS RoseRS_0109 NC_009523.1 127935 128186 R hypothetical protein complement(127935..128186) Roseiflexus sp. RS-1 5207042 YP_001274500.1 CDS RoseRS_0110 NC_009523.1 128203 129990 R TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase, SAD; threonyl-tRNA synthetase complement(128203..129990) Roseiflexus sp. RS-1 5207043 YP_001274501.1 CDS RoseRS_0111 NC_009523.1 130010 130591 R hypothetical protein complement(130010..130591) Roseiflexus sp. RS-1 5207044 YP_001274502.1 CDS RoseRS_0112 NC_009523.1 130968 133250 R PFAM: Na+/solute symporter; Na+/solute symporter complement(130968..133250) Roseiflexus sp. RS-1 5207045 YP_001274503.1 CDS RoseRS_0113 NC_009523.1 133367 134515 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(133367..134515) Roseiflexus sp. RS-1 5207046 YP_001274504.1 CDS RoseRS_0114 NC_009523.1 134569 135258 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(134569..135258) Roseiflexus sp. RS-1 5207047 YP_001274505.1 CDS RoseRS_0115 NC_009523.1 135782 136363 R PFAM: protein of unknown function DUF151; hypothetical protein complement(135782..136363) Roseiflexus sp. RS-1 5207048 YP_001274506.1 CDS RoseRS_0116 NC_009523.1 136652 137458 D PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 136652..137458 Roseiflexus sp. RS-1 5207049 YP_001274507.1 CDS RoseRS_0117 NC_009523.1 137455 138360 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; parB-like partition protein 137455..138360 Roseiflexus sp. RS-1 5207050 YP_001274508.1 CDS RoseRS_0118 NC_009523.1 138410 139039 D PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 138410..139039 Roseiflexus sp. RS-1 5207051 YP_001274509.1 CDS RoseRS_0119 NC_009523.1 139126 140925 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 139126..140925 Roseiflexus sp. RS-1 5207052 YP_001274510.1 CDS RoseRS_0120 NC_009523.1 140964 144251 D PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein 140964..144251 Roseiflexus sp. RS-1 5207053 YP_001274511.1 CDS RoseRS_0121 NC_009523.1 144387 145298 D PFAM: Auxin Efflux Carrier; auxin efflux carrier 144387..145298 Roseiflexus sp. RS-1 5207054 YP_001274512.1 CDS RoseRS_0122 NC_009523.1 145505 146101 D PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 145505..146101 Roseiflexus sp. RS-1 5207055 YP_001274513.1 CDS RoseRS_0123 NC_009523.1 146111 147445 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 146111..147445 Roseiflexus sp. RS-1 5207056 YP_001274514.1 CDS RoseRS_0124 NC_009523.1 147513 148424 D PFAM: DNA methylase N-4/N-6 domain protein; adenine-specific DNA-methyltransferase 147513..148424 Roseiflexus sp. RS-1 5207057 YP_001274515.1 CDS RoseRS_0125 NC_009523.1 148454 149008 D hypothetical protein 148454..149008 Roseiflexus sp. RS-1 5207058 YP_001274516.1 CDS RoseRS_0126 NC_009523.1 149921 151085 D hypothetical protein join(149921..150187,150189..151085) Roseiflexus sp. RS-1 5207059 YP_001274517.1 CDS RoseRS_0127 NC_009523.1 151822 152295 D hypothetical protein 151822..152295 Roseiflexus sp. RS-1 5207060 YP_001274518.1 CDS RoseRS_0128 NC_009523.1 152584 157779 D PFAM: peptidase C14, caspase catalytic subunit p20; Tetratricopeptide TPR_4; peptidase C14, caspase catalytic subunit p20 152584..157779 Roseiflexus sp. RS-1 5207061 YP_001274519.1 CDS RoseRS_0129 NC_009523.1 157914 160628 D TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 157914..160628 Roseiflexus sp. RS-1 5207062 YP_001274520.1 CDS RoseRS_0130 NC_009523.1 160625 161668 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 160625..161668 Roseiflexus sp. RS-1 5207063 YP_001274521.1 CDS RoseRS_0131 NC_009523.1 161736 162797 D TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 161736..162797 Roseiflexus sp. RS-1 5207064 YP_001274522.1 CDS RoseRS_0132 NC_009523.1 162808 164394 D TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 162808..164394 Roseiflexus sp. RS-1 5207065 YP_001274523.1 CDS RoseRS_0135 NC_009523.1 168740 169855 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(168740..169855) Roseiflexus sp. RS-1 5207067 YP_001274524.1 CDS RoseRS_0136 NC_009523.1 169927 170679 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(169927..170679) Roseiflexus sp. RS-1 5207068 YP_001274525.1 CDS RoseRS_0137 NC_009523.1 170760 172037 D PFAM: amine oxidase; FAD dependent oxidoreductase; amine oxidase 170760..172037 Roseiflexus sp. RS-1 5207069 YP_001274526.1 CDS RoseRS_0138 NC_009523.1 172112 174310 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase complement(172112..174310) Roseiflexus sp. RS-1 5207070 YP_001274527.1 CDS RoseRS_0139 NC_009523.1 174345 175337 R PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(174345..175337) Roseiflexus sp. RS-1 5207071 YP_001274528.1 CDS RoseRS_0140 NC_009523.1 175564 176919 D glucose/sorbosone dehydrogenase-like protein 175564..176919 Roseiflexus sp. RS-1 5207072 YP_001274529.1 CDS RoseRS_0141 NC_009523.1 176972 178549 D transcriptional regulator CdaR 176972..178549 Roseiflexus sp. RS-1 5207073 YP_001274530.1 CDS RoseRS_0142 NC_009523.1 178564 180819 R PFAM: UvrD/REP helicase; UvrD/REP helicase complement(178564..180819) Roseiflexus sp. RS-1 5207074 YP_001274531.1 CDS RoseRS_0143 NC_009523.1 180816 181448 R PFAM: Appr-1-p processing domain protein; appr-1-p processing domain-containing protein complement(180816..181448) Roseiflexus sp. RS-1 5207075 YP_001274532.1 CDS RoseRS_0144 NC_009523.1 181497 182213 R nicotinamidase-like amidase complement(181497..182213) Roseiflexus sp. RS-1 5207076 YP_001274533.1 CDS RoseRS_0145 NC_009523.1 182282 183040 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(182282..183040) Roseiflexus sp. RS-1 5207077 YP_001274534.1 CDS RoseRS_0146 NC_009523.1 183363 183539 R hypothetical protein complement(183363..183539) Roseiflexus sp. RS-1 5207079 YP_001274535.1 CDS RoseRS_0147 NC_009523.1 183977 185500 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 183977..185500 Roseiflexus sp. RS-1 5207080 YP_001274536.1 CDS RoseRS_0148 NC_009523.1 187337 190423 R SMART: Tetratricopeptide domain protein; tetratricopeptide domain-containing protein complement(187337..190423) Roseiflexus sp. RS-1 5207081 YP_001274537.1 CDS RoseRS_0149 NC_009523.1 190438 191811 R hypothetical protein complement(190438..191811) Roseiflexus sp. RS-1 5207082 YP_001274538.1 CDS RoseRS_0150 NC_009523.1 191891 193093 R hypothetical protein complement(191891..193093) Roseiflexus sp. RS-1 5207083 YP_001274539.1 CDS RoseRS_0151 NC_009523.1 193520 194914 R PFAM: transcriptional regulator domain protein; winged helix family two component response transcriptional regulator complement(193520..194914) Roseiflexus sp. RS-1 5207084 YP_001274540.1 CDS RoseRS_0152 NC_009523.1 194914 197271 R hypothetical protein complement(194914..197271) Roseiflexus sp. RS-1 5207085 YP_001274541.1 CDS RoseRS_0153 NC_009523.1 198141 198647 R hypothetical protein complement(198141..198647) Roseiflexus sp. RS-1 5207086 YP_001274542.1 CDS RoseRS_0154 NC_009523.1 198724 199686 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(198724..199686) Roseiflexus sp. RS-1 5207087 YP_001274543.1 CDS RoseRS_0157 NC_009523.1 200410 201467 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(200410..200940,200940..201467) Roseiflexus sp. RS-1 5207090 YP_001274544.1 CDS RoseRS_0158 NC_009523.1 201996 204902 R PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; peptidase M16C associated domain-containing protein complement(201996..204902) Roseiflexus sp. RS-1 5207091 YP_001274545.1 CDS RoseRS_0159 NC_009523.1 206011 206211 R hypothetical protein complement(206011..206211) Roseiflexus sp. RS-1 5207092 YP_001274546.1 CDS RoseRS_0160 NC_009523.1 206215 206679 R hypothetical protein complement(206215..206679) Roseiflexus sp. RS-1 5207093 YP_001274547.1 CDS RoseRS_0161 NC_009523.1 206829 207227 D PFAM: response regulator receiver; response regulator receiver protein 206829..207227 Roseiflexus sp. RS-1 5207094 YP_001274548.1 CDS RoseRS_0162 NC_009523.1 207304 207705 R PFAM: ATP-binding region, ATPase domain protein domain protein; putative anti-sigma regulatory factor complement(207304..207705) Roseiflexus sp. RS-1 5207095 YP_001274549.1 CDS RoseRS_0163 NC_009523.1 207692 208075 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(207692..208075) Roseiflexus sp. RS-1 5207096 YP_001274550.1 CDS RoseRS_0164 NC_009523.1 208322 208759 D PFAM: NUDIX hydrolase; NUDIX hydrolase 208322..208759 Roseiflexus sp. RS-1 5207097 YP_001274551.1 CDS RoseRS_0165 NC_009523.1 209109 209534 D hypothetical protein 209109..209534 Roseiflexus sp. RS-1 5207100 YP_001274552.1 CDS RoseRS_0166 NC_009523.1 209537 210004 D hypothetical protein 209537..210004 Roseiflexus sp. RS-1 5207101 YP_001274553.1 CDS RoseRS_0167 NC_009523.1 209937 211517 R recombinase B complement(209937..211517) Roseiflexus sp. RS-1 5207102 YP_001274554.1 CDS RoseRS_0168 NC_009523.1 211514 212743 R PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; class V aminotransferase complement(211514..212743) Roseiflexus sp. RS-1 5207103 YP_001274555.1 CDS RoseRS_0169 NC_009523.1 212743 213501 R TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase complement(212743..213501) Roseiflexus sp. RS-1 5207104 YP_001274556.1 CDS RoseRS_0170 NC_009523.1 213650 214432 R TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ complement(213650..214432) Roseiflexus sp. RS-1 5207105 YP_001274557.1 CDS RoseRS_0171 NC_009523.1 214659 217520 R hypothetical protein complement(214659..217520) Roseiflexus sp. RS-1 5207106 YP_001274558.1 CDS RoseRS_0172 NC_009523.1 217866 218132 R hypothetical protein complement(217866..218132) Roseiflexus sp. RS-1 5207107 YP_001274559.1 CDS RoseRS_0173 NC_009523.1 218119 218358 R hypothetical protein complement(218119..218358) Roseiflexus sp. RS-1 5207108 YP_001274560.1 CDS RoseRS_0174 NC_009523.1 218697 219677 R PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM complement(218697..219677) Roseiflexus sp. RS-1 5207109 YP_001274561.1 CDS RoseRS_0175 NC_009523.1 219682 220644 R PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent enzyme subunit beta complement(219682..220644) Roseiflexus sp. RS-1 5207110 YP_001274562.1 CDS RoseRS_0176 NC_009523.1 220779 222059 D PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; major facilitator transporter 220779..222059 Roseiflexus sp. RS-1 5207111 YP_001274563.1 CDS RoseRS_0177 NC_009523.1 222129 223673 D PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; secretion protein HlyD family protein; secretion protein HlyD family protein 222129..223673 Roseiflexus sp. RS-1 5207112 YP_001274564.1 CDS RoseRS_0178 NC_009523.1 223683 226601 D PFAM: protein of unknown function DUF214; hypothetical protein 223683..226601 Roseiflexus sp. RS-1 5207113 YP_001274565.1 CDS RoseRS_0179 NC_009523.1 226641 227627 D TIGRFAM: transcriptional regulator, AbrB family; PFAM: ABC transporter related; SpoVT/AbrB domain protein; SMART: AAA ATPase; AbrB family transcriptional regulator 226641..227627 Roseiflexus sp. RS-1 5207114 YP_001274566.1 CDS RoseRS_0180 NC_009523.1 227624 228319 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 227624..228319 Roseiflexus sp. RS-1 5207115 YP_001274567.1 CDS RoseRS_0181 NC_009523.1 228365 229516 D ATPase AAA 228365..229516 Roseiflexus sp. RS-1 5207116 YP_001274568.1 CDS RoseRS_0182 NC_009523.1 229657 230928 D hypothetical protein 229657..230928 Roseiflexus sp. RS-1 5207117 YP_001274569.1 CDS RoseRS_0183 NC_009523.1 230939 231340 D hypothetical protein 230939..231340 Roseiflexus sp. RS-1 5207118 YP_001274570.1 CDS RoseRS_0184 NC_009523.1 231731 231985 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 231731..231985 Roseiflexus sp. RS-1 5207119 YP_001274571.1 CDS RoseRS_0185 NC_009523.1 231982 232404 D PFAM: PilT protein domain protein; PilT domain-containing protein 231982..232404 Roseiflexus sp. RS-1 5207120 YP_001274572.1 CDS RoseRS_0186 NC_009523.1 232895 233143 D hypothetical protein 232895..233143 Roseiflexus sp. RS-1 5207121 YP_001274573.1 CDS RoseRS_0187 NC_009523.1 233411 234619 R PFAM: ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase complement(233411..234619) Roseiflexus sp. RS-1 5207122 YP_001274574.1 CDS RoseRS_0188 NC_009523.1 234812 235549 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 234812..235549 Roseiflexus sp. RS-1 5207123 YP_001274575.1 CDS smpB NC_009523.1 235561 236037 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(235561..236037) Roseiflexus sp. RS-1 5207124 YP_001274576.1 CDS pyrF NC_009523.1 236131 236949 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(236131..236949) Roseiflexus sp. RS-1 5207125 YP_001274577.1 CDS RoseRS_0191 NC_009523.1 237364 238572 D TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor RpoD domain protein; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor 237364..238572 Roseiflexus sp. RS-1 5207126 YP_001274578.1 CDS RoseRS_0192 NC_009523.1 238834 239115 D PFAM: transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 238834..239115 Roseiflexus sp. RS-1 5207127 YP_001274579.1 CDS RoseRS_0193 NC_009523.1 239267 239779 D hypothetical protein 239267..239779 Roseiflexus sp. RS-1 5207128 YP_001274580.1 CDS RoseRS_0194 NC_009523.1 239785 240537 D PFAM: chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 239785..240537 Roseiflexus sp. RS-1 5207129 YP_001274581.1 CDS RoseRS_0195 NC_009523.1 240565 241296 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(240565..241296) Roseiflexus sp. RS-1 5207130 YP_001274582.1 CDS RoseRS_0196 NC_009523.1 241310 242980 R TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(241310..242980) Roseiflexus sp. RS-1 5207131 YP_001274583.1 CDS RoseRS_0197 NC_009523.1 243106 243549 D PFAM: heat shock protein Hsp20; heat shock protein Hsp20 243106..243549 Roseiflexus sp. RS-1 5207132 YP_001274584.1 CDS RoseRS_0198 NC_009523.1 243871 244158 D hypothetical protein 243871..244158 Roseiflexus sp. RS-1 5207133 YP_001274585.1 CDS RoseRS_0199 NC_009523.1 244347 244883 D PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 244347..244883 Roseiflexus sp. RS-1 5207134 YP_001274586.1 CDS RoseRS_0200 NC_009523.1 244946 245521 D hypothetical protein 244946..245521 Roseiflexus sp. RS-1 5207135 YP_001274587.1 CDS RoseRS_0201 NC_009523.1 245579 246385 D hypothetical protein 245579..246385 Roseiflexus sp. RS-1 5207136 YP_001274588.1 CDS RoseRS_0202 NC_009523.1 247162 247407 D hypothetical protein 247162..247407 Roseiflexus sp. RS-1 5207137 YP_001274589.1 CDS RoseRS_0203 NC_009523.1 247404 247661 D hypothetical protein 247404..247661 Roseiflexus sp. RS-1 5207138 YP_001274590.1 CDS RoseRS_0204 NC_009523.1 247812 249875 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor hybrid histidine kinase 247812..249875 Roseiflexus sp. RS-1 5207139 YP_001274591.1 CDS RoseRS_0205 NC_009523.1 249916 250326 D PFAM: response regulator receiver; response regulator receiver protein 249916..250326 Roseiflexus sp. RS-1 5207140 YP_001274592.1 CDS purH NC_009523.1 250856 252373 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 250856..252373 Roseiflexus sp. RS-1 5207141 YP_001274593.1 CDS RoseRS_0207 NC_009523.1 252381 253007 D PFAM: phosphoribosyl-AMP cyclohydrolase; MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-AMP cyclohydrolase 252381..253007 Roseiflexus sp. RS-1 5207142 YP_001274594.1 CDS RoseRS_0208 NC_009523.1 253010 254275 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; histidine kinase 253010..254275 Roseiflexus sp. RS-1 5207143 YP_001274595.1 CDS RoseRS_0209 NC_009523.1 254295 254600 R hypothetical protein complement(254295..254600) Roseiflexus sp. RS-1 5207144 YP_001274596.1 CDS RoseRS_0210 NC_009523.1 255136 255447 R hypothetical protein complement(255136..255447) Roseiflexus sp. RS-1 5207145 YP_001274597.1 CDS RoseRS_0211 NC_009523.1 255567 256001 D hypothetical protein 255567..256001 Roseiflexus sp. RS-1 5207146 YP_001274598.1 CDS RoseRS_0212 NC_009523.1 256087 257379 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(256087..257379) Roseiflexus sp. RS-1 5207147 YP_001274599.1 CDS RoseRS_0213 NC_009523.1 257394 258548 R hypothetical protein complement(257394..258548) Roseiflexus sp. RS-1 5207148 YP_001274600.1 CDS RoseRS_0214 NC_009523.1 258739 260412 R TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit complement(258739..260412) Roseiflexus sp. RS-1 5207149 YP_001274601.1 CDS RoseRS_0215 NC_009523.1 260534 261148 D hypothetical protein 260534..261148 Roseiflexus sp. RS-1 5207150 YP_001274602.1 CDS RoseRS_0216 NC_009523.1 261099 262121 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; glyoxylate reductase 261099..262121 Roseiflexus sp. RS-1 5207151 YP_001274603.1 CDS RoseRS_0217 NC_009523.1 262879 263439 D PFAM: protein of unknown function DUF820; hypothetical protein 262879..263439 Roseiflexus sp. RS-1 5207152 YP_001274604.1 CDS RoseRS_0218 NC_009523.1 263528 264250 D hypothetical protein 263528..264250 Roseiflexus sp. RS-1 5207153 YP_001274605.1 CDS RoseRS_0219 NC_009523.1 264378 266072 D PFAM: formate-tetrahydrofolate ligase, FTHFS; formate--tetrahydrofolate ligase 264378..266072 Roseiflexus sp. RS-1 5207154 YP_001274606.1 CDS RoseRS_0220 NC_009523.1 266099 267115 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; 3-beta hydroxysteroid dehydrogenase/isomerase complement(266099..267115) Roseiflexus sp. RS-1 5207155 YP_001274607.1 CDS RoseRS_0221 NC_009523.1 267105 268205 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(267105..268205) Roseiflexus sp. RS-1 5207156 YP_001274608.1 CDS RoseRS_0222 NC_009523.1 269248 270762 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 269248..270762 Roseiflexus sp. RS-1 5207157 YP_001274609.1 CDS RoseRS_0223 NC_009523.1 270768 275903 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 270768..275903 Roseiflexus sp. RS-1 5207158 YP_001274610.1 CDS RoseRS_0224 NC_009523.1 276074 277678 D TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 276074..277678 Roseiflexus sp. RS-1 5207159 YP_001274611.1 CDS RoseRS_0225 NC_009523.1 277993 278811 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 277993..278811 Roseiflexus sp. RS-1 5207160 YP_001274612.1 CDS RoseRS_0226 NC_009523.1 278811 279626 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 278811..279626 Roseiflexus sp. RS-1 5207161 YP_001274613.1 CDS RoseRS_0227 NC_009523.1 279623 280078 D PFAM: amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 279623..280078 Roseiflexus sp. RS-1 5207162 YP_001274614.1 CDS RoseRS_0228 NC_009523.1 280090 281766 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 280090..281766 Roseiflexus sp. RS-1 5207163 YP_001274615.1 CDS RoseRS_0229 NC_009523.1 281771 282835 D PFAM: beta-lactamase; beta-lactamase 281771..282835 Roseiflexus sp. RS-1 5207164 YP_001274616.1 CDS RoseRS_0230 NC_009523.1 283228 283656 D hypothetical protein 283228..283656 Roseiflexus sp. RS-1 5207165 YP_001274617.1 CDS RoseRS_0231 NC_009523.1 283660 286194 R PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; GAF sensor hybrid histidine kinase complement(283660..286194) Roseiflexus sp. RS-1 5207166 YP_001274618.1 CDS asnC NC_009523.1 286204 287526 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(286204..287526) Roseiflexus sp. RS-1 5207167 YP_001274619.1 CDS RoseRS_0233 NC_009523.1 287709 288590 D TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 287709..288590 Roseiflexus sp. RS-1 5207168 YP_001274620.1 CDS RoseRS_0234 NC_009523.1 289031 289486 R hypothetical protein complement(289031..289486) Roseiflexus sp. RS-1 5207169 YP_001274621.1 CDS RoseRS_0235 NC_009523.1 289732 292491 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(289732..292491) Roseiflexus sp. RS-1 5207170 YP_001274622.1 CDS RoseRS_0236 NC_009523.1 292605 293486 D PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 292605..293486 Roseiflexus sp. RS-1 5207171 YP_001274623.1 CDS RoseRS_0237 NC_009523.1 293633 296230 R ATPase AAA complement(293633..296230) Roseiflexus sp. RS-1 5207172 YP_001274624.1 CDS RoseRS_0238 NC_009523.1 296561 296950 R hypothetical protein complement(296561..296950) Roseiflexus sp. RS-1 5207173 YP_001274625.1 CDS RoseRS_0239 NC_009523.1 297127 300447 R PFAM: protein of unknown function DUF1156; hypothetical protein complement(297127..300447) Roseiflexus sp. RS-1 5207174 YP_001274626.1 CDS RoseRS_0240 NC_009523.1 300689 304039 R PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; helicase domain-containing protein complement(300689..304039) Roseiflexus sp. RS-1 5207175 YP_001274627.1 CDS RoseRS_0241 NC_009523.1 304959 305784 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(join(304959..305384,305386..305784)) Roseiflexus sp. RS-1 5207176 YP_001274628.1 CDS RoseRS_0242 NC_009523.1 306778 310218 R PFAM: NHL repeat containing protein; SMART: low-density lipoprotein receptor, YWTD repeat; NHL repeat-containing protein complement(306778..310218) Roseiflexus sp. RS-1 5207177 YP_001274629.1 CDS RoseRS_0243 NC_009523.1 310276 312792 R PFAM: glycosyl transferase, family 39; glycosyl transferase family protein complement(310276..312792) Roseiflexus sp. RS-1 5207178 YP_001274630.1 CDS RoseRS_0244 NC_009523.1 312869 313555 R PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator complement(312869..313555) Roseiflexus sp. RS-1 5207179 YP_001274631.1 CDS RoseRS_0245 NC_009523.1 313548 314210 R PFAM: Phosphoglycerate mutase; phosphoglycerate mutase complement(313548..314210) Roseiflexus sp. RS-1 5207180 YP_001274632.1 CDS RoseRS_0246 NC_009523.1 314266 314688 R hypothetical protein complement(314266..314688) Roseiflexus sp. RS-1 5207181 YP_001274633.1 CDS RoseRS_0247 NC_009523.1 315239 316296 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(315239..315766,315766..316296)) Roseiflexus sp. RS-1 5207182 YP_001274634.1 CDS RoseRS_0248 NC_009523.1 316487 317308 R PFAM: metallophosphoesterase; metallophosphoesterase complement(316487..317308) Roseiflexus sp. RS-1 5207183 YP_001274635.1 CDS RoseRS_0249 NC_009523.1 317756 319141 D TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 317756..319141 Roseiflexus sp. RS-1 5207184 YP_001274636.1 CDS RoseRS_0250 NC_009523.1 319197 319868 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 319197..319868 Roseiflexus sp. RS-1 5207185 YP_001274637.1 CDS RoseRS_0251 NC_009523.1 320508 321401 R TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase complement(320508..321401) Roseiflexus sp. RS-1 5207186 YP_001274638.1 CDS RoseRS_0252 NC_009523.1 321398 323173 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; multi-sensor signal transduction histidine kinase complement(321398..323173) Roseiflexus sp. RS-1 5207187 YP_001274639.1 CDS RoseRS_0253 NC_009523.1 323443 324372 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(323443..324372) Roseiflexus sp. RS-1 5207188 YP_001274640.1 CDS RoseRS_0254 NC_009523.1 324480 325430 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase complement(324480..325430) Roseiflexus sp. RS-1 5207189 YP_001274641.1 CDS RoseRS_0255 NC_009523.1 325467 326060 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(325467..326060) Roseiflexus sp. RS-1 5207190 YP_001274642.1 CDS RoseRS_0256 NC_009523.1 326308 326673 R PFAM: zinc finger, DksA/TraR C4-type; TraR/DksA family transcriptional regulator complement(326308..326673) Roseiflexus sp. RS-1 5207191 YP_001274643.1 CDS RoseRS_0257 NC_009523.1 326826 327473 R hypothetical protein complement(326826..327473) Roseiflexus sp. RS-1 5207192 YP_001274644.1 CDS RoseRS_0258 NC_009523.1 327630 327959 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 327630..327959 Roseiflexus sp. RS-1 5207193 YP_001274645.1 CDS RoseRS_0259 NC_009523.1 327978 328571 R hypothetical protein complement(327978..328571) Roseiflexus sp. RS-1 5207194 YP_001274646.1 CDS RoseRS_0260 NC_009523.1 328629 329420 D hypothetical protein 328629..329420 Roseiflexus sp. RS-1 5207195 YP_001274647.1 CDS RoseRS_0262 NC_009523.1 330925 331353 R hypothetical protein complement(330925..331353) Roseiflexus sp. RS-1 5207197 YP_001274648.1 CDS RoseRS_0263 NC_009523.1 331594 332913 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(331594..332913) Roseiflexus sp. RS-1 5207198 YP_001274649.1 CDS RoseRS_0264 NC_009523.1 333005 333532 D PFAM: protein of unknown function DUF820; hypothetical protein 333005..333532 Roseiflexus sp. RS-1 5207199 YP_001274650.1 CDS RoseRS_0265 NC_009523.1 333806 335344 D PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 333806..335344 Roseiflexus sp. RS-1 5207200 YP_001274651.1 CDS RoseRS_0266 NC_009523.1 336650 337273 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 336650..337273 Roseiflexus sp. RS-1 5207201 YP_001274652.1 CDS RoseRS_0267 NC_009523.1 337362 339122 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 337362..339122 Roseiflexus sp. RS-1 5207202 YP_001274653.1 CDS RoseRS_0268 NC_009523.1 339193 340026 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 339193..340026 Roseiflexus sp. RS-1 5207203 YP_001274654.1 CDS RoseRS_0269 NC_009523.1 340033 341277 D PFAM: protein of unknown function DUF214; hypothetical protein 340033..341277 Roseiflexus sp. RS-1 5207204 YP_001274655.1 CDS RoseRS_0270 NC_009523.1 341347 343359 R PFAM: alpha/beta hydrolase fold; TAP domain protein; TAP domain-containing protein complement(341347..343359) Roseiflexus sp. RS-1 5207205 YP_001274656.1 CDS RoseRS_0271 NC_009523.1 343703 345277 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 343703..345277 Roseiflexus sp. RS-1 5207206 YP_001274657.1 CDS RoseRS_0273 NC_009523.1 346256 347299 D PFAM: protein of unknown function DUF1016; hypothetical protein 346256..347299 Roseiflexus sp. RS-1 5207208 YP_001274658.1 CDS RoseRS_0274 NC_009523.1 347289 347579 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 347289..347579 Roseiflexus sp. RS-1 5207209 YP_001274659.1 CDS RoseRS_0275 NC_009523.1 347661 347942 D hypothetical protein 347661..347942 Roseiflexus sp. RS-1 5207210 YP_001274660.1 CDS RoseRS_0276 NC_009523.1 348028 349191 D PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 348028..349191 Roseiflexus sp. RS-1 5207211 YP_001274661.1 CDS RoseRS_0279 NC_009523.1 351461 355276 D hypothetical protein 351461..355276 Roseiflexus sp. RS-1 5207214 YP_001274662.1 CDS RoseRS_0280 NC_009523.1 355485 356474 D PFAM: Death-on-curing protein; death-on-curing protein 355485..356474 Roseiflexus sp. RS-1 5207215 YP_001274663.1 CDS RoseRS_0281 NC_009523.1 356471 359557 D TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease 356471..359557 Roseiflexus sp. RS-1 5207216 YP_001274664.1 CDS RoseRS_0282 NC_009523.1 359747 360679 R hypothetical protein complement(359747..360679) Roseiflexus sp. RS-1 5207217 YP_001274665.1 CDS RoseRS_0283 NC_009523.1 360666 362132 R hypothetical protein complement(360666..362132) Roseiflexus sp. RS-1 5207218 YP_001274666.1 CDS RoseRS_0284 NC_009523.1 362126 362719 R molybdopterin-guanine dinucleotide biosynthesis protein A-like protein complement(362126..362719) Roseiflexus sp. RS-1 5207219 YP_001274667.1 CDS RoseRS_0285 NC_009523.1 363480 364631 R PFAM: Glycoside hydrolase, family 42, N-terminal domain protein; glycoside hydrolase family 42 protein complement(363480..364631) Roseiflexus sp. RS-1 5207220 YP_001274668.1 CDS RoseRS_0286 NC_009523.1 364631 365950 R PFAM: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(364631..365950) Roseiflexus sp. RS-1 5207221 YP_001274669.1 CDS RoseRS_0287 NC_009523.1 366008 367633 R TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor RpoD domain protein; PFAM: Bacterio-opsin activator, HTH domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor complement(366008..367633) Roseiflexus sp. RS-1 5207222 YP_001274670.1 CDS RoseRS_0288 NC_009523.1 367805 369760 R TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; DNA primase complement(367805..369760) Roseiflexus sp. RS-1 5207223 YP_001274671.1 CDS RoseRS_0289 NC_009523.1 369992 371065 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(369992..371065) Roseiflexus sp. RS-1 5207224 YP_001274672.1 CDS RoseRS_0290 NC_009523.1 371149 371631 R hypothetical protein complement(371149..371631) Roseiflexus sp. RS-1 5207225 YP_001274673.1 CDS RoseRS_0291 NC_009523.1 371791 372027 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(371791..372027) Roseiflexus sp. RS-1 5207226 YP_001274674.1 CDS RoseRS_0292 NC_009523.1 372140 372814 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; CRP/FNR family transcriptional regulator complement(372140..372814) Roseiflexus sp. RS-1 5207227 YP_001274675.1 CDS RoseRS_0293 NC_009523.1 372939 374453 D PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 372939..374453 Roseiflexus sp. RS-1 5207228 YP_001274676.1 CDS RoseRS_0294 NC_009523.1 375535 376497 D hypothetical protein 375535..376497 Roseiflexus sp. RS-1 5207229 YP_001274677.1 CDS RoseRS_0295 NC_009523.1 376618 377058 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator complement(376618..377058) Roseiflexus sp. RS-1 5207230 YP_001274678.1 CDS RoseRS_0296 NC_009523.1 377692 378372 D hypothetical protein 377692..378372 Roseiflexus sp. RS-1 5207231 YP_001274679.1 CDS RoseRS_0297 NC_009523.1 378388 379452 D PFAM: Appr-1-p processing domain protein; appr-1-p processing domain-containing protein 378388..379452 Roseiflexus sp. RS-1 5207232 YP_001274680.1 CDS RoseRS_0298 NC_009523.1 379705 383091 D PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; helicase domain-containing protein 379705..383091 Roseiflexus sp. RS-1 5207233 YP_001274681.1 CDS RoseRS_0299 NC_009523.1 383091 386555 D hypothetical protein 383091..386555 Roseiflexus sp. RS-1 5207234 YP_001274682.1 CDS RoseRS_0300 NC_009523.1 386775 387356 D hypothetical protein 386775..387356 Roseiflexus sp. RS-1 5207235 YP_001274683.1 CDS RoseRS_0301 NC_009523.1 387528 388289 D hypothetical protein 387528..388289 Roseiflexus sp. RS-1 5207236 YP_001274684.1 CDS RoseRS_0302 NC_009523.1 388207 389264 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(388207..388734,388734..389264)) Roseiflexus sp. RS-1 5207237 YP_001274685.1 CDS RoseRS_0303 NC_009523.1 389756 390763 D hypothetical protein 389756..390763 Roseiflexus sp. RS-1 5207238 YP_001274686.1 CDS RoseRS_0304 NC_009523.1 391288 392181 D PFAM: protein of unknown function DUF1130; hypothetical protein 391288..392181 Roseiflexus sp. RS-1 5207239 YP_001274687.1 CDS RoseRS_0305 NC_009523.1 392193 393020 D hypothetical protein 392193..393020 Roseiflexus sp. RS-1 5207240 YP_001274688.1 CDS RoseRS_0306 NC_009523.1 393098 394231 R hypothetical protein complement(393098..394231) Roseiflexus sp. RS-1 5207241 YP_001274689.1 CDS RoseRS_0307 NC_009523.1 394231 395511 R PFAM: glycoside hydrolase, family 18; SMART: chitinase II; glycoside hydrolase family protein complement(394231..395511) Roseiflexus sp. RS-1 5207242 YP_001274690.1 CDS RoseRS_0308 NC_009523.1 395558 395959 R PFAM: protein of unknown function DUF1025; hypothetical protein complement(395558..395959) Roseiflexus sp. RS-1 5207243 YP_001274691.1 CDS RoseRS_0309 NC_009523.1 396061 396654 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(396061..396654) Roseiflexus sp. RS-1 5207244 YP_001274692.1 CDS RoseRS_0310 NC_009523.1 397318 397974 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 397318..397974 Roseiflexus sp. RS-1 5207245 YP_001274693.1 CDS RoseRS_0311 NC_009523.1 397971 398252 D catalyzes the hydrolysis of acylphosphate; acylphosphatase 397971..398252 Roseiflexus sp. RS-1 5207246 YP_001274694.1 CDS RoseRS_0312 NC_009523.1 398857 399699 D hypothetical protein 398857..399699 Roseiflexus sp. RS-1 5207247 YP_001274695.1 CDS RoseRS_0313 NC_009523.1 400225 400662 D hypothetical protein 400225..400662 Roseiflexus sp. RS-1 5207248 YP_001274696.1 CDS RoseRS_0314 NC_009523.1 400828 401310 D hypothetical protein 400828..401310 Roseiflexus sp. RS-1 5207249 YP_001274697.1 CDS RoseRS_0315 NC_009523.1 401458 403905 R PFAM: transglutaminase domain protein; transglutaminase domain-containing protein complement(401458..403905) Roseiflexus sp. RS-1 5207250 YP_001274698.1 CDS RoseRS_0316 NC_009523.1 403902 404675 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase complement(403902..404675) Roseiflexus sp. RS-1 5207251 YP_001274699.1 CDS RoseRS_0317 NC_009523.1 404744 405967 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; response regulator receiver sensor signal transduction histidine kinase 404744..405967 Roseiflexus sp. RS-1 5207252 YP_001274700.1 CDS RoseRS_0318 NC_009523.1 405964 406545 D PFAM: Uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein 405964..406545 Roseiflexus sp. RS-1 5207253 YP_001274701.1 CDS RoseRS_0319 NC_009523.1 406542 407693 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 406542..407693 Roseiflexus sp. RS-1 5207254 YP_001274702.1 CDS RoseRS_0320 NC_009523.1 407987 409402 R catalyzes the formation of phenol and pyruvate from tyrosine; tyrosine phenol-lyase complement(407987..409402) Roseiflexus sp. RS-1 5207255 YP_001274703.1 CDS RoseRS_0321 NC_009523.1 409426 411474 R TIGRFAM: hypoxanthine phosphoribosyltransferase; tRNA(Ile)-lysidine synthetase; PFAM: phosphoribosyltransferase; PP-loop domain protein; tRNA(Ile)-lysidine synthetase domain protein; hypoxanthine phosphoribosyltransferase complement(409426..411474) Roseiflexus sp. RS-1 5207256 YP_001274704.1 CDS RoseRS_0322 NC_009523.1 411487 413370 R hypothetical protein complement(411487..413370) Roseiflexus sp. RS-1 5207257 YP_001274705.1 CDS RoseRS_0323 NC_009523.1 413390 414877 R hypothetical protein complement(413390..414877) Roseiflexus sp. RS-1 5207258 YP_001274706.1 CDS RoseRS_0324 NC_009523.1 415014 415748 R TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase complement(415014..415748) Roseiflexus sp. RS-1 5207259 YP_001274707.1 CDS RoseRS_0325 NC_009523.1 415844 416413 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 415844..416413 Roseiflexus sp. RS-1 5207260 YP_001274708.1 CDS RoseRS_0326 NC_009523.1 416415 417155 D PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 416415..417155 Roseiflexus sp. RS-1 5207261 YP_001274709.1 CDS RoseRS_0327 NC_009523.1 417152 417919 D PFAM: protein of unknown function DUF82; hypothetical protein 417152..417919 Roseiflexus sp. RS-1 5207262 YP_001274710.1 CDS RoseRS_0328 NC_009523.1 418024 418971 D TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; 2-dehydropantoate 2-reductase 418024..418971 Roseiflexus sp. RS-1 5207263 YP_001274711.1 CDS RoseRS_0329 NC_009523.1 419019 419360 R PFAM: Stage V sporulation protein S; stage V sporulation protein S complement(419019..419360) Roseiflexus sp. RS-1 5207264 YP_001274712.1 CDS RoseRS_0330 NC_009523.1 419550 421157 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(419550..421157) Roseiflexus sp. RS-1 5207265 YP_001274713.1 CDS RoseRS_0331 NC_009523.1 421282 424887 D TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; chromosome segregation protein SMC 421282..424887 Roseiflexus sp. RS-1 5207266 YP_001274714.1 CDS RoseRS_0332 NC_009523.1 425710 426408 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 425710..426408 Roseiflexus sp. RS-1 5207267 YP_001274715.1 CDS RoseRS_0333 NC_009523.1 426854 427306 R hypothetical protein complement(426854..427306) Roseiflexus sp. RS-1 5207268 YP_001274716.1 CDS RoseRS_0334 NC_009523.1 427570 429510 D glycosyltransferase 427570..429510 Roseiflexus sp. RS-1 5207269 YP_001274717.1 CDS RoseRS_0335 NC_009523.1 429701 430834 D PFAM: Patatin; patatin 429701..430834 Roseiflexus sp. RS-1 5207270 YP_001274718.1 CDS RoseRS_0336 NC_009523.1 430831 431691 D PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein 430831..431691 Roseiflexus sp. RS-1 5207271 YP_001274719.1 CDS RoseRS_0337 NC_009523.1 431914 432333 D PFAM: response regulator receiver; response regulator receiver protein 431914..432333 Roseiflexus sp. RS-1 5207272 YP_001274720.1 CDS RoseRS_0338 NC_009523.1 432581 434122 D TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 432581..434122 Roseiflexus sp. RS-1 5207273 YP_001274721.1 CDS RoseRS_0339 NC_009523.1 434504 435229 D PFAM: carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 434504..435229 Roseiflexus sp. RS-1 5207274 YP_001274722.1 CDS RoseRS_0340 NC_009523.1 435271 435762 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 435271..435762 Roseiflexus sp. RS-1 5207275 YP_001274723.1 CDS RoseRS_0341 NC_009523.1 435839 438220 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 435839..438220 Roseiflexus sp. RS-1 5207276 YP_001274724.1 CDS RoseRS_0342 NC_009523.1 438289 439155 D PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; molybdopterin dehydrogenase 438289..439155 Roseiflexus sp. RS-1 5207277 YP_001274725.1 CDS RoseRS_0343 NC_009523.1 439384 440412 D PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 439384..440412 Roseiflexus sp. RS-1 5207278 YP_001274726.1 CDS RoseRS_0344 NC_009523.1 440745 441551 R PFAM: histidine triad (HIT) protein; Methyltransferase type 11; Methyltransferase type 12; histidine triad (HIT) protein complement(440745..441551) Roseiflexus sp. RS-1 5207279 YP_001274727.1 CDS RoseRS_0345 NC_009523.1 441585 442703 R hypothetical protein complement(441585..442703) Roseiflexus sp. RS-1 5207280 YP_001274728.1 CDS RoseRS_0346 NC_009523.1 443372 443836 R hypothetical protein complement(443372..443836) Roseiflexus sp. RS-1 5207281 YP_001274729.1 CDS RoseRS_0347 NC_009523.1 443947 444660 D hypothetical protein 443947..444660 Roseiflexus sp. RS-1 5207282 YP_001274730.1 CDS RoseRS_0348 NC_009523.1 444835 445158 D hypothetical protein 444835..445158 Roseiflexus sp. RS-1 5207283 YP_001274731.1 CDS RoseRS_0349 NC_009523.1 445412 446470 D PFAM: peptidase M18, aminopeptidase I; peptidase M20; peptidase M42 family protein; peptidase M42 family protein 445412..446470 Roseiflexus sp. RS-1 5207284 YP_001274732.1 CDS RoseRS_0350 NC_009523.1 446805 447962 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 446805..447962 Roseiflexus sp. RS-1 5207285 YP_001274733.1 CDS RoseRS_0351 NC_009523.1 447940 449307 D PFAM: phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase 447940..449307 Roseiflexus sp. RS-1 5207286 YP_001274734.1 CDS RoseRS_0352 NC_009523.1 449285 450589 D TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; methyltransferase small; (Uracil-5)-methyltransferase; RNA methyltransferase 449285..450589 Roseiflexus sp. RS-1 5207287 YP_001274735.1 CDS RoseRS_0353 NC_009523.1 450873 452324 D hypothetical protein 450873..452324 Roseiflexus sp. RS-1 5207288 YP_001274736.1 CDS RoseRS_0354 NC_009523.1 452427 453572 R dipeptide ABC transporter periplasmic component-like protein complement(452427..453572) Roseiflexus sp. RS-1 5207289 YP_001274737.1 CDS RoseRS_0355 NC_009523.1 454020 457112 R PFAM: NHL repeat containing protein; NHL repeat-containing protein complement(454020..457112) Roseiflexus sp. RS-1 5207290 YP_001274738.1 CDS RoseRS_0356 NC_009523.1 457328 457552 R hypothetical protein complement(457328..457552) Roseiflexus sp. RS-1 5207291 YP_001274739.1 CDS RoseRS_0357 NC_009523.1 457732 458043 D hypothetical protein 457732..458043 Roseiflexus sp. RS-1 5207292 YP_001274740.1 CDS RoseRS_0358 NC_009523.1 458354 458569 D PFAM: protein of unknown function UPF0150; hypothetical protein 458354..458569 Roseiflexus sp. RS-1 5207293 YP_001274741.1 CDS RoseRS_0359 NC_009523.1 459530 460507 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; NAD-dependent epimerase/dehydratase 459530..460507 Roseiflexus sp. RS-1 5207294 YP_001274742.1 CDS RoseRS_0361 NC_009523.1 461909 462679 R hypothetical protein complement(461909..462679) Roseiflexus sp. RS-1 5207296 YP_001274743.1 CDS RoseRS_0362 NC_009523.1 462682 463647 R hypothetical protein complement(462682..463647) Roseiflexus sp. RS-1 5207297 YP_001274744.1 CDS RoseRS_0363 NC_009523.1 463644 464123 R hypothetical protein complement(463644..464123) Roseiflexus sp. RS-1 5207298 YP_001274745.1 CDS RoseRS_0364 NC_009523.1 464120 465184 R PFAM: protein of unknown function DUF324; hypothetical protein complement(464120..465184) Roseiflexus sp. RS-1 5207299 YP_001274746.1 CDS RoseRS_0365 NC_009523.1 465177 466046 R TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; PFAM: protein of unknown function DUF324; CRISPR-associated Csm3 family protein complement(465177..466046) Roseiflexus sp. RS-1 5207300 YP_001274747.1 CDS RoseRS_0366 NC_009523.1 466036 466506 R hypothetical protein complement(466036..466506) Roseiflexus sp. RS-1 5207301 YP_001274748.1 CDS RoseRS_0367 NC_009523.1 466487 467668 R hypothetical protein complement(466487..467668) Roseiflexus sp. RS-1 5207302 YP_001274749.1 CDS RoseRS_0368 NC_009523.1 467665 468318 R PFAM: protein of unknown function DUF324; hypothetical protein complement(467665..468318) Roseiflexus sp. RS-1 5207303 YP_001274750.1 CDS RoseRS_0369 NC_009523.1 468315 470489 R hydrolase complement(468315..470489) Roseiflexus sp. RS-1 5207304 YP_001274751.1 CDS RoseRS_0370 NC_009523.1 470744 471796 R hypothetical protein complement(470744..471796) Roseiflexus sp. RS-1 5207305 YP_001274752.1 CDS RoseRS_0371 NC_009523.1 472080 473132 D PFAM: nuclease (SNase domain protein); nuclease 472080..473132 Roseiflexus sp. RS-1 5207306 YP_001274753.1 CDS RoseRS_0372 NC_009523.1 473366 474530 R hypothetical protein complement(join(473366..474262,474264..474530)) Roseiflexus sp. RS-1 5207307 YP_001274754.1 CDS RoseRS_0373 NC_009523.1 474609 475091 R hypothetical protein complement(474609..475091) Roseiflexus sp. RS-1 5207308 YP_001274755.1 CDS RoseRS_0374 NC_009523.1 475756 476796 D PFAM: nuclease (SNase domain protein); nuclease 475756..476796 Roseiflexus sp. RS-1 5207309 YP_001274756.1 CDS RoseRS_0375 NC_009523.1 476836 477957 R PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(476836..477957) Roseiflexus sp. RS-1 5207310 YP_001274757.1 CDS RoseRS_0376 NC_009523.1 478206 478571 R hypothetical protein complement(478206..478571) Roseiflexus sp. RS-1 5207311 YP_001274758.1 CDS RoseRS_0377 NC_009523.1 478576 478905 R hypothetical protein complement(478576..478905) Roseiflexus sp. RS-1 5207312 YP_001274759.1 CDS RoseRS_0378 NC_009523.1 479098 479853 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(479098..479853) Roseiflexus sp. RS-1 5207313 YP_001274760.1 CDS RoseRS_0379 NC_009523.1 479985 480212 R hypothetical protein complement(479985..480212) Roseiflexus sp. RS-1 5207314 YP_001274761.1 CDS RoseRS_0380 NC_009523.1 480216 480503 R hypothetical protein complement(480216..480503) Roseiflexus sp. RS-1 5207315 YP_001274762.1 CDS RoseRS_0381 NC_009523.1 480642 481316 R hypothetical protein complement(480642..481316) Roseiflexus sp. RS-1 5207316 YP_001274763.1 CDS RoseRS_0382 NC_009523.1 481624 482694 D PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; myo-inositol-1-phosphate synthase 481624..482694 Roseiflexus sp. RS-1 5207317 YP_001274764.1 CDS RoseRS_0383 NC_009523.1 482879 484849 D hypothetical protein 482879..484849 Roseiflexus sp. RS-1 5207318 YP_001274765.1 CDS RoseRS_0384 NC_009523.1 484866 486101 R PFAM: band 7 protein; hypothetical protein complement(484866..486101) Roseiflexus sp. RS-1 5207319 YP_001274766.1 CDS RoseRS_0385 NC_009523.1 486098 487612 R hypothetical protein complement(486098..487612) Roseiflexus sp. RS-1 5207320 YP_001274767.1 CDS RoseRS_0386 NC_009523.1 488305 489486 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(488305..489486) Roseiflexus sp. RS-1 5207321 YP_001274768.1 CDS RoseRS_0387 NC_009523.1 489813 490811 R PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(489813..490811) Roseiflexus sp. RS-1 5207322 YP_001274769.1 CDS RoseRS_0388 NC_009523.1 490954 491763 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(490954..491763) Roseiflexus sp. RS-1 5207323 YP_001274770.1 CDS glyA NC_009523.1 491976 493286 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 491976..493286 Roseiflexus sp. RS-1 5207324 YP_001274771.1 CDS RoseRS_0390 NC_009523.1 493340 494158 D TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase 493340..494158 Roseiflexus sp. RS-1 5207325 YP_001274772.1 CDS RoseRS_0391 NC_009523.1 494398 495930 R PFAM: protein of unknown function DUF1058; SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; SH3 type 3 domain-containing protein complement(494398..495930) Roseiflexus sp. RS-1 5207326 YP_001274773.1 CDS RoseRS_0392 NC_009523.1 496148 497050 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 496148..497050 Roseiflexus sp. RS-1 5207327 YP_001274774.1 CDS RoseRS_0393 NC_009523.1 497059 497925 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase, alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 497059..497925 Roseiflexus sp. RS-1 5207328 YP_001274775.1 CDS RoseRS_0394 NC_009523.1 497912 499960 R PFAM: glycosyl transferase, family 39; glycosyl transferase family protein complement(497912..499960) Roseiflexus sp. RS-1 5207329 YP_001274776.1 CDS RoseRS_0395 NC_009523.1 500094 500345 R hypothetical protein complement(500094..500345) Roseiflexus sp. RS-1 5207330 YP_001274777.1 CDS RoseRS_0396 NC_009523.1 500409 502082 R hypothetical protein complement(500409..502082) Roseiflexus sp. RS-1 5207331 YP_001274778.1 CDS RoseRS_0397 NC_009523.1 502233 503528 D PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 502233..503528 Roseiflexus sp. RS-1 5207332 YP_001274779.1 CDS RoseRS_0398 NC_009523.1 504160 505386 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 504160..505386 Roseiflexus sp. RS-1 5207334 YP_001274780.1 CDS RoseRS_0399 NC_009523.1 505728 507026 R hypothetical protein complement(505728..507026) Roseiflexus sp. RS-1 5207335 YP_001274781.1 CDS RoseRS_0400 NC_009523.1 507199 507945 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 507199..507945 Roseiflexus sp. RS-1 5207336 YP_001274782.1 CDS RoseRS_0401 NC_009523.1 507927 509120 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 507927..509120 Roseiflexus sp. RS-1 5207337 YP_001274783.1 CDS RoseRS_0402 NC_009523.1 509117 510601 D PFAM: sugar transferase; sugar transferase 509117..510601 Roseiflexus sp. RS-1 5207338 YP_001274784.1 CDS RoseRS_0403 NC_009523.1 510746 513427 D hypothetical protein 510746..513427 Roseiflexus sp. RS-1 5207339 YP_001274785.1 CDS RoseRS_0404 NC_009523.1 513509 514873 R PFAM: aminotransferase class-III; class III aminotransferase complement(513509..514873) Roseiflexus sp. RS-1 5207340 YP_001274786.1 CDS RoseRS_0405 NC_009523.1 515185 515772 D hypothetical protein 515185..515772 Roseiflexus sp. RS-1 5207341 YP_001274787.1 CDS RoseRS_0406 NC_009523.1 515810 517147 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase complement(515810..517147) Roseiflexus sp. RS-1 5207342 YP_001274788.1 CDS RoseRS_0407 NC_009523.1 517219 518679 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(517219..518679) Roseiflexus sp. RS-1 5207343 YP_001274789.1 CDS RoseRS_0408 NC_009523.1 519011 519517 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; redoxin domain-containing protein complement(519011..519517) Roseiflexus sp. RS-1 5207344 YP_001274790.1 CDS RoseRS_0409 NC_009523.1 519730 521208 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; putative PAS/PAC sensor protein 519730..521208 Roseiflexus sp. RS-1 5207345 YP_001274791.1 CDS RoseRS_0410 NC_009523.1 521356 523833 D PFAM: glycosyl transferase, family 39; glycosyl transferase family protein 521356..523833 Roseiflexus sp. RS-1 5207346 YP_001274792.1 CDS RoseRS_0411 NC_009523.1 523858 524982 R PFAM: restriction endonuclease; restriction endonuclease complement(523858..524982) Roseiflexus sp. RS-1 5207347 YP_001274793.1 CDS RoseRS_0412 NC_009523.1 525036 527123 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; multi-sensor signal transduction histidine kinase complement(525036..527123) Roseiflexus sp. RS-1 5207348 YP_001274794.1 CDS RoseRS_0413 NC_009523.1 527559 529520 D dipeptide ABC transporter periplasmic component-like protein 527559..529520 Roseiflexus sp. RS-1 5207349 YP_001274795.1 CDS RoseRS_0414 NC_009523.1 529612 530814 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 529612..530814 Roseiflexus sp. RS-1 5207350 YP_001274796.1 CDS RoseRS_0415 NC_009523.1 530831 531835 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 530831..531835 Roseiflexus sp. RS-1 5207351 YP_001274797.1 CDS RoseRS_0416 NC_009523.1 531853 532890 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 531853..532890 Roseiflexus sp. RS-1 5207352 YP_001274798.1 CDS RoseRS_0417 NC_009523.1 532932 533915 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 532932..533915 Roseiflexus sp. RS-1 5207353 YP_001274799.1 CDS RoseRS_0418 NC_009523.1 533928 534947 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 533928..534947 Roseiflexus sp. RS-1 5207354 YP_001274800.1 CDS RoseRS_0419 NC_009523.1 534982 536049 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 534982..536049 Roseiflexus sp. RS-1 5207355 YP_001274801.1 CDS RoseRS_0420 NC_009523.1 537047 537757 D PFAM: protein of unknown function DUF820; hypothetical protein 537047..537757 Roseiflexus sp. RS-1 5207356 YP_001274802.1 CDS RoseRS_0421 NC_009523.1 537931 540444 D PFAM: regulator of chromosome condensation, RCC1; regulator of chromosome condensation, RCC1 537931..540444 Roseiflexus sp. RS-1 5207357 YP_001274803.1 CDS RoseRS_0422 NC_009523.1 540636 541523 R PFAM: YdjC family protein; hypothetical protein complement(540636..541523) Roseiflexus sp. RS-1 5207358 YP_001274804.1 CDS RoseRS_0423 NC_009523.1 541539 542174 R TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase complement(541539..542174) Roseiflexus sp. RS-1 5207359 YP_001274805.1 CDS RoseRS_0424 NC_009523.1 542447 543589 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(542447..543589) Roseiflexus sp. RS-1 5207360 YP_001274806.1 CDS RoseRS_0425 NC_009523.1 543730 544209 D PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding protein LysM 543730..544209 Roseiflexus sp. RS-1 5207361 YP_001274807.1 CDS RoseRS_0426 NC_009523.1 544432 545088 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(544432..545088) Roseiflexus sp. RS-1 5207362 YP_001274808.1 CDS RoseRS_0427 NC_009523.1 545265 545996 D TIGRFAM: LexA repressor; PFAM: peptidase S24, S26A and S26B; LexA DNA-binding domain protein; SOS-response transcriptional repressor LexA 545265..545996 Roseiflexus sp. RS-1 5207363 YP_001274809.1 CDS RoseRS_0428 NC_009523.1 546135 546530 R PFAM: protein of unknown function DUF35; hypothetical protein complement(546135..546530) Roseiflexus sp. RS-1 5207364 YP_001274810.1 CDS RoseRS_0429 NC_009523.1 546546 547706 R Acetyl-CoA acetyltransferase-like protein complement(546546..547706) Roseiflexus sp. RS-1 5207365 YP_001274811.1 CDS RoseRS_0430 NC_009523.1 547706 548752 R TIGRFAM: putative hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase, N-terminal domain; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; hypothetical protein complement(547706..548752) Roseiflexus sp. RS-1 5207366 YP_001274812.1 CDS RoseRS_0431 NC_009523.1 548966 550336 R TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; hydroxymethylglutaryl-CoA reductase, degradative complement(548966..550336) Roseiflexus sp. RS-1 5207367 YP_001274813.1 CDS RoseRS_0432 NC_009523.1 550483 551205 D hypothetical protein 550483..551205 Roseiflexus sp. RS-1 5207368 YP_001274814.1 CDS RoseRS_0433 NC_009523.1 551695 552657 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 551695..552657 Roseiflexus sp. RS-1 5207369 YP_001274815.1 CDS RoseRS_0434 NC_009523.1 553221 555200 D PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; carbamoyl-phosphate synthase subunit L 553221..555200 Roseiflexus sp. RS-1 5207370 YP_001274816.1 CDS RoseRS_0437 NC_009523.1 556389 557993 R TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; L-aspartate oxidase complement(556389..557993) Roseiflexus sp. RS-1 5207373 YP_001274817.1 CDS RoseRS_0438 NC_009523.1 558100 559131 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(558100..559131) Roseiflexus sp. RS-1 5207374 YP_001274818.1 CDS RoseRS_0439 NC_009523.1 559128 560018 R TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(559128..560018) Roseiflexus sp. RS-1 5207375 YP_001274819.1 CDS RoseRS_0442 NC_009523.1 561312 562476 D hypothetical protein join(561312..561578,561580..562476) Roseiflexus sp. RS-1 5207378 YP_001274820.1 CDS RoseRS_0444 NC_009523.1 563079 564197 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(563079..564197) Roseiflexus sp. RS-1 5207380 YP_001274821.1 CDS RoseRS_0445 NC_009523.1 564523 564984 R hypothetical protein complement(564523..564984) Roseiflexus sp. RS-1 5207381 YP_001274822.1 CDS RoseRS_0447 NC_009523.1 566030 566254 R hypothetical protein complement(566030..566254) Roseiflexus sp. RS-1 5207383 YP_001274823.1 CDS RoseRS_0448 NC_009523.1 566416 566862 D hypothetical protein 566416..566862 Roseiflexus sp. RS-1 5207384 YP_001274824.1 CDS RoseRS_0449 NC_009523.1 566872 567642 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone) 566872..567642 Roseiflexus sp. RS-1 5207385 YP_001274825.1 CDS RoseRS_0450 NC_009523.1 567643 568224 D hypothetical protein 567643..568224 Roseiflexus sp. RS-1 5207386 YP_001274826.1 CDS RoseRS_0451 NC_009523.1 568255 568704 D hypothetical protein 568255..568704 Roseiflexus sp. RS-1 5207387 YP_001274827.1 CDS RoseRS_0452 NC_009523.1 568836 569303 R hypothetical protein complement(568836..569303) Roseiflexus sp. RS-1 5207388 YP_001274828.1 CDS RoseRS_0453 NC_009523.1 569477 570037 R hypothetical protein complement(569477..570037) Roseiflexus sp. RS-1 5207389 YP_001274829.1 CDS RoseRS_0454 NC_009523.1 570091 570717 R PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator complement(570091..570717) Roseiflexus sp. RS-1 5207390 YP_001274830.1 CDS RoseRS_0455 NC_009523.1 570984 572231 R PFAM: protein of unknown function DUF405; protein of unknown function DUF418; hypothetical protein complement(570984..572231) Roseiflexus sp. RS-1 5207391 YP_001274831.1 CDS RoseRS_0456 NC_009523.1 572445 574772 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase complement(572445..574772) Roseiflexus sp. RS-1 5207392 YP_001274832.1 CDS RoseRS_0457 NC_009523.1 575301 576689 D hypothetical protein 575301..576689 Roseiflexus sp. RS-1 5207393 YP_001274833.1 CDS RoseRS_0458 NC_009523.1 577017 577685 R hypothetical protein complement(577017..577685) Roseiflexus sp. RS-1 5207394 YP_001274834.1 CDS RoseRS_0459 NC_009523.1 577945 579036 D hypothetical protein 577945..579036 Roseiflexus sp. RS-1 5207395 YP_001274835.1 CDS RoseRS_0460 NC_009523.1 580513 584634 R hypothetical protein complement(580513..584634) Roseiflexus sp. RS-1 5207396 YP_001274836.1 CDS RoseRS_0461 NC_009523.1 585367 588327 R PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; helicase domain-containing protein complement(585367..588327) Roseiflexus sp. RS-1 5207397 YP_001274837.1 CDS RoseRS_0462 NC_009523.1 588443 588751 R hypothetical protein complement(588443..588751) Roseiflexus sp. RS-1 5207398 YP_001274838.1 CDS RoseRS_0463 NC_009523.1 588748 590922 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase complement(588748..590922) Roseiflexus sp. RS-1 5207399 YP_001274839.1 CDS RoseRS_0464 NC_009523.1 590923 591708 R PFAM: transcriptional regulator TrmB; transcriptional regulator TrmB complement(590923..591708) Roseiflexus sp. RS-1 5207400 YP_001274840.1 CDS RoseRS_0465 NC_009523.1 591861 593261 D PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 591861..593261 Roseiflexus sp. RS-1 5207401 YP_001274841.1 CDS RoseRS_0466 NC_009523.1 593252 594160 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 593252..594160 Roseiflexus sp. RS-1 5207402 YP_001274842.1 CDS RoseRS_0467 NC_009523.1 594157 595086 D PFAM: Methyltransferase type 11; type 11 methyltransferase 594157..595086 Roseiflexus sp. RS-1 5207403 YP_001274843.1 CDS RoseRS_0468 NC_009523.1 595099 595914 D PFAM: Methyltransferase type 11; type 11 methyltransferase 595099..595914 Roseiflexus sp. RS-1 5207404 YP_001274844.1 CDS RoseRS_0469 NC_009523.1 596020 597480 D PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; polysaccharide biosynthesis protein 596020..597480 Roseiflexus sp. RS-1 5207405 YP_001274845.1 CDS RoseRS_0470 NC_009523.1 597504 599183 D PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 597504..599183 Roseiflexus sp. RS-1 5207406 YP_001274846.1 CDS RoseRS_0471 NC_009523.1 599305 600840 D hypothetical protein 599305..600840 Roseiflexus sp. RS-1 5207407 YP_001274847.1 CDS RoseRS_0472 NC_009523.1 600992 601477 D hypothetical protein 600992..601477 Roseiflexus sp. RS-1 5207408 YP_001274848.1 CDS RoseRS_0473 NC_009523.1 601493 602326 D PFAM: Methyltransferase type 12; type 12 methyltransferase 601493..602326 Roseiflexus sp. RS-1 5207409 YP_001274849.1 CDS RoseRS_0474 NC_009523.1 602395 603810 R PFAM: regulatory protein, LuxR; Kelch repeat-containing protein; Bacterio-opsin activator, HTH domain protein; sigma-70 region 4 domain protein; Kelch repeat protein; Sigma-70, region 4 type 2; response regulator receiver protein complement(602395..603810) Roseiflexus sp. RS-1 5207410 YP_001274850.1 CDS RoseRS_0475 NC_009523.1 603969 605822 R hypothetical protein complement(603969..605822) Roseiflexus sp. RS-1 5207411 YP_001274851.1 CDS RoseRS_0476 NC_009523.1 606447 607205 R hypothetical protein complement(606447..607205) Roseiflexus sp. RS-1 5207412 YP_001274852.1 CDS RoseRS_0477 NC_009523.1 607454 607648 D hypothetical protein 607454..607648 Roseiflexus sp. RS-1 5207413 YP_001274853.1 CDS RoseRS_0478 NC_009523.1 607747 608937 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 607747..608937 Roseiflexus sp. RS-1 5207414 YP_001274854.1 CDS RoseRS_0479 NC_009523.1 608939 609685 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 608939..609685 Roseiflexus sp. RS-1 5207415 YP_001274855.1 CDS RoseRS_0480 NC_009523.1 609753 610157 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 609753..610157 Roseiflexus sp. RS-1 5207416 YP_001274856.1 CDS RoseRS_0481 NC_009523.1 610191 611168 D PFAM: conserved hypothetical protein 374; hypothetical protein 610191..611168 Roseiflexus sp. RS-1 5207417 YP_001274857.1 CDS RoseRS_0482 NC_009523.1 611317 612525 D hypothetical protein 611317..612525 Roseiflexus sp. RS-1 5207418 YP_001274858.1 CDS RoseRS_0484 NC_009523.1 612787 615840 R TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(612787..615840) Roseiflexus sp. RS-1 5207420 YP_001274859.1 CDS RoseRS_0485 NC_009523.1 615991 617052 D TIGRFAM: putative translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; aIF-2BI family translation initiation factor 615991..617052 Roseiflexus sp. RS-1 5207421 YP_001274860.1 CDS RoseRS_0486 NC_009523.1 617056 618096 D hypothetical protein 617056..618096 Roseiflexus sp. RS-1 5207422 YP_001274861.1 CDS RoseRS_0487 NC_009523.1 618108 619091 D PFAM: PfkB domain protein; ribokinase-like domain-containing protein 618108..619091 Roseiflexus sp. RS-1 5207423 YP_001274862.1 CDS RoseRS_0488 NC_009523.1 619185 620480 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 619185..620480 Roseiflexus sp. RS-1 5207424 YP_001274863.1 CDS RoseRS_0489 NC_009523.1 620492 621709 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 620492..621709 Roseiflexus sp. RS-1 5207425 YP_001274864.1 CDS RoseRS_0490 NC_009523.1 621908 622771 D hypothetical protein 621908..622771 Roseiflexus sp. RS-1 5207426 YP_001274865.1 CDS RoseRS_0491 NC_009523.1 623054 623629 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(623054..623629) Roseiflexus sp. RS-1 5207428 YP_001274866.1 CDS RoseRS_0492 NC_009523.1 623622 624596 R hypothetical protein complement(623622..624596) Roseiflexus sp. RS-1 5207429 YP_001274867.1 CDS RoseRS_0493 NC_009523.1 624600 625628 R PFAM: Vitamin K epoxide reductase; vitamin K epoxide reductase complement(624600..625628) Roseiflexus sp. RS-1 5207430 YP_001274868.1 CDS RoseRS_0494 NC_009523.1 625985 627820 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(625985..627820) Roseiflexus sp. RS-1 5207431 YP_001274869.1 CDS RoseRS_0495 NC_009523.1 627972 629783 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(627972..629783) Roseiflexus sp. RS-1 5207432 YP_001274870.1 CDS RoseRS_0496 NC_009523.1 630266 630796 R hypothetical protein complement(630266..630796) Roseiflexus sp. RS-1 5207433 YP_001274871.1 CDS RoseRS_0497 NC_009523.1 630922 632028 R hypothetical protein complement(630922..632028) Roseiflexus sp. RS-1 5207434 YP_001274872.1 CDS RoseRS_0498 NC_009523.1 632111 632869 R TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; 2-deoxy-D-gluconate 3-dehydrogenase complement(632111..632869) Roseiflexus sp. RS-1 5207435 YP_001274873.1 CDS RoseRS_0499 NC_009523.1 632878 633705 R PFAM: Myo-inositol catabolism IolB domain protein; myo-inositol catabolism IolB domain-containing protein complement(632878..633705) Roseiflexus sp. RS-1 5207436 YP_001274874.1 CDS RoseRS_0500 NC_009523.1 633859 635334 R PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; hypothetical protein complement(633859..635334) Roseiflexus sp. RS-1 5207437 YP_001274875.1 CDS RoseRS_0501 NC_009523.1 635347 636081 R xanthine and Co dehydrogenase maturation factor complement(635347..636081) Roseiflexus sp. RS-1 5207438 YP_001274876.1 CDS RoseRS_0502 NC_009523.1 636253 636567 R PFAM: protein of unknown function DUF182; hypothetical protein complement(636253..636567) Roseiflexus sp. RS-1 5207439 YP_001274877.1 CDS RoseRS_0503 NC_009523.1 636583 638700 R PFAM: Peptidoglycan-binding LysM; polysaccharide deacetylase; polysaccharide deacetylase complement(636583..638700) Roseiflexus sp. RS-1 5207440 YP_001274878.1 CDS RoseRS_0504 NC_009523.1 638763 639233 D hypothetical protein 638763..639233 Roseiflexus sp. RS-1 5207441 YP_001274879.1 CDS RoseRS_0505 NC_009523.1 639362 640324 R hypothetical protein complement(639362..640324) Roseiflexus sp. RS-1 5207442 YP_001274880.1 CDS RoseRS_0506 NC_009523.1 640464 641741 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(640464..641741) Roseiflexus sp. RS-1 5207443 YP_001274881.1 CDS RoseRS_0507 NC_009523.1 641758 642873 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(641758..642873) Roseiflexus sp. RS-1 5207444 YP_001274882.1 CDS RoseRS_0508 NC_009523.1 642870 643352 R PFAM: protein of unknown function DUF402; hypothetical protein complement(642870..643352) Roseiflexus sp. RS-1 5207445 YP_001274883.1 CDS RoseRS_0509 NC_009523.1 643428 644126 R PFAM: Methyltransferase type 11; type 11 methyltransferase complement(643428..644126) Roseiflexus sp. RS-1 5207446 YP_001274884.1 CDS RoseRS_0510 NC_009523.1 644246 645256 R TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; rod shape-determining protein MreB complement(644246..645256) Roseiflexus sp. RS-1 5207447 YP_001274885.1 CDS atpC NC_009523.1 645378 645797 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(645378..645797) Roseiflexus sp. RS-1 5207448 YP_001274886.1 CDS RoseRS_0512 NC_009523.1 645804 647219 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(645804..647219) Roseiflexus sp. RS-1 5207449 YP_001274887.1 CDS RoseRS_0513 NC_009523.1 647249 648121 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(647249..648121) Roseiflexus sp. RS-1 5207450 YP_001274888.1 CDS RoseRS_0514 NC_009523.1 648152 649735 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(648152..649735) Roseiflexus sp. RS-1 5207451 YP_001274889.1 CDS RoseRS_0515 NC_009523.1 649783 650259 R PFAM: H+-transporting two-sector ATPase, delta (OSCP) subunit; H+-transporting two-sector ATPase subunit delta complement(649783..650259) Roseiflexus sp. RS-1 5207452 YP_001274890.1 CDS RoseRS_0516 NC_009523.1 650303 650794 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(650303..650794) Roseiflexus sp. RS-1 5207453 YP_001274891.1 CDS RoseRS_0517 NC_009523.1 650825 651058 R TIGRFAM: ATP synthase F0, C subunit; PFAM: H+-transporting two-sector ATPase, C subunit; ATP synthase F0 subunit C complement(650825..651058) Roseiflexus sp. RS-1 5207454 YP_001274892.1 CDS RoseRS_0518 NC_009523.1 651142 652116 R TIGRFAM: ATP synthase F0, A subunit; PFAM: H+-transporting two-sector ATPase, A subunit; ATP synthase F0 subunit A complement(651142..652116) Roseiflexus sp. RS-1 5207455 YP_001274893.1 CDS RoseRS_0519 NC_009523.1 652290 653255 R PFAM: response regulator receiver; response regulator receiver protein complement(652290..653255) Roseiflexus sp. RS-1 5207456 YP_001274894.1 CDS RoseRS_0520 NC_009523.1 653276 654946 R PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; multi-sensor signal transduction histidine kinase complement(653276..654946) Roseiflexus sp. RS-1 5207457 YP_001274895.1 CDS RoseRS_0521 NC_009523.1 654966 656111 R hypothetical protein complement(654966..656111) Roseiflexus sp. RS-1 5207458 YP_001274896.1 CDS RoseRS_0522 NC_009523.1 656270 656764 D PFAM: PspC domain protein; phage shock protein PspC 656270..656764 Roseiflexus sp. RS-1 5207459 YP_001274897.1 CDS RoseRS_0523 NC_009523.1 656867 657406 R PFAM: protein of unknown function DUF165; hypothetical protein complement(656867..657406) Roseiflexus sp. RS-1 5207460 YP_001274898.1 CDS RoseRS_0524 NC_009523.1 657556 658575 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; alanine racemase 657556..658575 Roseiflexus sp. RS-1 5207461 YP_001274899.1 CDS RoseRS_0525 NC_009523.1 658629 659732 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein 658629..659732 Roseiflexus sp. RS-1 5207462 YP_001274900.1 CDS RoseRS_0526 NC_009523.1 659734 660102 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 659734..660102 Roseiflexus sp. RS-1 5207463 YP_001274901.1 CDS RoseRS_0527 NC_009523.1 660227 661849 R hypothetical protein complement(660227..661849) Roseiflexus sp. RS-1 5207464 YP_001274902.1 CDS RoseRS_0528 NC_009523.1 662276 663571 D hypothetical protein 662276..663571 Roseiflexus sp. RS-1 5207465 YP_001274903.1 CDS RoseRS_0529 NC_009523.1 663691 664488 D SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 663691..664488 Roseiflexus sp. RS-1 5207466 YP_001274904.1 CDS RoseRS_0530 NC_009523.1 664504 665001 D PFAM: protein of unknown function DUF520; hypothetical protein 664504..665001 Roseiflexus sp. RS-1 5207467 YP_001274905.1 CDS RoseRS_0531 NC_009523.1 665005 666423 D TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 665005..666423 Roseiflexus sp. RS-1 5207468 YP_001274906.1 CDS RoseRS_0532 NC_009523.1 666482 666901 R PFAM: Penicillinase repressor; CopY family transcriptional regulator complement(666482..666901) Roseiflexus sp. RS-1 5207469 YP_001274907.1 CDS RoseRS_0533 NC_009523.1 667075 668091 D PFAM: Polyprenyl synthetase; polyprenyl synthetase 667075..668091 Roseiflexus sp. RS-1 5207470 YP_001274908.1 CDS RoseRS_0534 NC_009523.1 668184 669257 R PFAM: Protein of unknown function DUF1626; hypothetical protein complement(668184..669257) Roseiflexus sp. RS-1 5207471 YP_001274909.1 CDS RoseRS_0535 NC_009523.1 669810 671198 R PFAM: VWA containing CoxE family protein; VWA containing CoxE family protein complement(669810..671198) Roseiflexus sp. RS-1 5207472 YP_001274910.1 CDS RoseRS_0536 NC_009523.1 671211 672191 R PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase complement(671211..672191) Roseiflexus sp. RS-1 5207473 YP_001274911.1 CDS RoseRS_0537 NC_009523.1 672206 673057 R PFAM: metallophosphoesterase; metallophosphoesterase complement(672206..673057) Roseiflexus sp. RS-1 5207474 YP_001274912.1 CDS RoseRS_0539 NC_009523.1 673986 675043 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(673986..674516,674516..675043) Roseiflexus sp. RS-1 5207476 YP_001274913.1 CDS RoseRS_0541 NC_009523.1 676124 676975 D PFAM: photosystem I assembly BtpA; photosystem I assembly BtpA 676124..676975 Roseiflexus sp. RS-1 5207478 YP_001274914.1 CDS RoseRS_0542 NC_009523.1 677275 678069 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 677275..678069 Roseiflexus sp. RS-1 5207479 YP_001274915.1 CDS RoseRS_0543 NC_009523.1 678066 678542 R TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C complement(678066..678542) Roseiflexus sp. RS-1 5207480 YP_001274916.1 CDS RoseRS_0544 NC_009523.1 678925 681096 D TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 678925..681096 Roseiflexus sp. RS-1 5207482 YP_001274917.1 CDS RoseRS_0545 NC_009523.1 681093 683315 D MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 681093..683315 Roseiflexus sp. RS-1 5207483 YP_001274918.1 CDS RoseRS_0546 NC_009523.1 683312 684448 D functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 683312..684448 Roseiflexus sp. RS-1 5207484 YP_001274919.1 CDS RoseRS_0547 NC_009523.1 684902 685204 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 684902..685204 Roseiflexus sp. RS-1 5207485 YP_001274920.1 CDS RoseRS_0548 NC_009523.1 685194 685538 D PFAM: protein of unknown function DUF86; hypothetical protein 685194..685538 Roseiflexus sp. RS-1 5207486 YP_001274921.1 CDS RoseRS_0549 NC_009523.1 685864 686397 D hypothetical protein 685864..686397 Roseiflexus sp. RS-1 5207487 YP_001274922.1 CDS RoseRS_0550 NC_009523.1 686418 687230 D PFAM: iron dependent repressor; FeoA family protein; FeoA family protein 686418..687230 Roseiflexus sp. RS-1 5207488 YP_001274923.1 CDS RoseRS_0551 NC_009523.1 687256 687744 D hypothetical protein 687256..687744 Roseiflexus sp. RS-1 5207489 YP_001274924.1 CDS RoseRS_0552 NC_009523.1 687823 688077 D PFAM: FeoA family protein; FeoA family protein 687823..688077 Roseiflexus sp. RS-1 5207490 YP_001274925.1 CDS RoseRS_0553 NC_009523.1 688064 688321 D PFAM: FeoA family protein; FeoA family protein 688064..688321 Roseiflexus sp. RS-1 5207491 YP_001274926.1 CDS RoseRS_0554 NC_009523.1 688318 688848 D TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; small GTP-binding protein 688318..688848 Roseiflexus sp. RS-1 5207492 YP_001274927.1 CDS RoseRS_0555 NC_009523.1 688848 690581 D PFAM: Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; ferrous iron transport B domain-containing protein 688848..690581 Roseiflexus sp. RS-1 5207493 YP_001274928.1 CDS RoseRS_0556 NC_009523.1 690735 690989 D hypothetical protein 690735..690989 Roseiflexus sp. RS-1 5207494 YP_001274929.1 CDS RoseRS_0557 NC_009523.1 691587 692267 D TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 691587..692267 Roseiflexus sp. RS-1 5207495 YP_001274930.1 CDS RoseRS_0558 NC_009523.1 692362 696723 D TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase; cobaltochelatase 692362..696723 Roseiflexus sp. RS-1 5207496 YP_001274931.1 CDS RoseRS_0559 NC_009523.1 696950 698011 D PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 696950..698011 Roseiflexus sp. RS-1 5207497 YP_001274932.1 CDS RoseRS_0560 NC_009523.1 698152 698901 D TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin biosynthesis protein CbiM 698152..698901 Roseiflexus sp. RS-1 5207498 YP_001274933.1 CDS RoseRS_0561 NC_009523.1 698898 699194 D TIGRFAM: cobalt transport protein; PFAM: Cobalt transport protein CbiN; cobalt transport protein 698898..699194 Roseiflexus sp. RS-1 5207499 YP_001274934.1 CDS RoseRS_0562 NC_009523.1 699210 699980 D TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ 699210..699980 Roseiflexus sp. RS-1 5207500 YP_001274935.1 CDS RoseRS_0563 NC_009523.1 699977 700708 D TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase 699977..700708 Roseiflexus sp. RS-1 5207501 YP_001274936.1 CDS RoseRS_0564 NC_009523.1 700896 701900 D TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CobD 700896..701900 Roseiflexus sp. RS-1 5207502 YP_001274937.1 CDS RoseRS_0565 NC_009523.1 701867 703282 D PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 701867..703282 Roseiflexus sp. RS-1 5207503 YP_001274938.1 CDS RoseRS_0566 NC_009523.1 703366 703884 D multimeric flavodoxin WrbA-like protein 703366..703884 Roseiflexus sp. RS-1 5207504 YP_001274939.1 CDS RoseRS_0567 NC_009523.1 703884 704552 D PFAM: Precorrin-8X methylmutase CbiC/CobH; precorrin-8X methylmutase CbiC/CobH 703884..704552 Roseiflexus sp. RS-1 5207505 YP_001274940.1 CDS cbiD NC_009523.1 704552 705793 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 704552..705793 Roseiflexus sp. RS-1 5207506 YP_001274941.1 CDS RoseRS_0569 NC_009523.1 705790 707016 D TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 705790..707016 Roseiflexus sp. RS-1 5207507 YP_001274942.1 CDS RoseRS_0570 NC_009523.1 707009 707737 D TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-2 C(20)-methyltransferase 707009..707737 Roseiflexus sp. RS-1 5207508 YP_001274943.1 CDS RoseRS_0571 NC_009523.1 707734 708552 D TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 707734..708552 Roseiflexus sp. RS-1 5207509 YP_001274944.1 CDS RoseRS_0572 NC_009523.1 708549 710951 D TIGRFAM: precorrin-3B C17-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; precorrin-3B C(17)-methyltransferase 708549..710951 Roseiflexus sp. RS-1 5207510 YP_001274945.1 CDS RoseRS_0573 NC_009523.1 711095 711874 D TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C-methyltransferase 711095..711874 Roseiflexus sp. RS-1 5207511 YP_001274946.1 CDS RoseRS_0574 NC_009523.1 711874 713277 D TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid a,c-diamide synthase 711874..713277 Roseiflexus sp. RS-1 5207512 YP_001274947.1 CDS RoseRS_0575 NC_009523.1 713274 713828 D PFAM: cobalbumin biosynthesis enzyme; adenosylcobinamide-phosphate guanylyltransferase 713274..713828 Roseiflexus sp. RS-1 5207513 YP_001274948.1 CDS RoseRS_0576 NC_009523.1 713807 714880 D PFAM: aminotransferase, class I and II; class I/II aminotransferase 713807..714880 Roseiflexus sp. RS-1 5207514 YP_001274949.1 CDS RoseRS_0577 NC_009523.1 714877 716349 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 714877..716349 Roseiflexus sp. RS-1 5207515 YP_001274950.1 CDS RoseRS_0578 NC_009523.1 716413 718095 D PFAM: ABC-1 domain protein; hypothetical protein 716413..718095 Roseiflexus sp. RS-1 5207516 YP_001274951.1 CDS RoseRS_0579 NC_009523.1 718180 718734 D PFAM: PEBP family protein; PEBP family protein 718180..718734 Roseiflexus sp. RS-1 5207517 YP_001274952.1 CDS RoseRS_0580 NC_009523.1 718738 719865 R PFAM: glycosyl transferase, family 4; glycosyl transferase family protein complement(718738..719865) Roseiflexus sp. RS-1 5207518 YP_001274953.1 CDS upp NC_009523.1 719907 720533 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(719907..720533) Roseiflexus sp. RS-1 5207519 YP_001274954.1 CDS RoseRS_0582 NC_009523.1 721117 722388 D TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 721117..722388 Roseiflexus sp. RS-1 5207520 YP_001274955.1 CDS RoseRS_0583 NC_009523.1 724200 728201 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(724200..728201) Roseiflexus sp. RS-1 5207521 YP_001274956.1 CDS RoseRS_0584 NC_009523.1 729790 730752 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 729790..730752 Roseiflexus sp. RS-1 5207522 YP_001274957.1 CDS RoseRS_0585 NC_009523.1 730881 733883 R hypothetical protein complement(730881..733883) Roseiflexus sp. RS-1 5207523 YP_001274958.1 CDS RoseRS_0586 NC_009523.1 733932 735089 R PFAM: protein of unknown function DUF58; hypothetical protein complement(733932..735089) Roseiflexus sp. RS-1 5207524 YP_001274959.1 CDS RoseRS_0587 NC_009523.1 735154 736104 R PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase complement(735154..736104) Roseiflexus sp. RS-1 5207525 YP_001274960.1 CDS RoseRS_0588 NC_009523.1 736115 736879 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(736115..736879) Roseiflexus sp. RS-1 5207526 YP_001274961.1 CDS RoseRS_0589 NC_009523.1 737231 738148 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 737231..738148 Roseiflexus sp. RS-1 5207527 YP_001274962.1 CDS RoseRS_0590 NC_009523.1 738156 739391 D PFAM: protein of unknown function DUF111; hypothetical protein 738156..739391 Roseiflexus sp. RS-1 5207528 YP_001274963.1 CDS RoseRS_0591 NC_009523.1 739482 740084 R hypothetical protein complement(739482..740084) Roseiflexus sp. RS-1 5207529 YP_001274964.1 CDS RoseRS_0592 NC_009523.1 740337 741470 D PFAM: permease; permease 740337..741470 Roseiflexus sp. RS-1 5207530 YP_001274965.1 CDS RoseRS_0593 NC_009523.1 741574 742038 R PFAM: ferric-uptake regulator; ferric uptake regulator family protein complement(741574..742038) Roseiflexus sp. RS-1 5207531 YP_001274966.1 CDS RoseRS_0594 NC_009523.1 742137 742871 D hypothetical protein 742137..742871 Roseiflexus sp. RS-1 5207532 YP_001274967.1 CDS RoseRS_0595 NC_009523.1 742964 743650 D PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator 742964..743650 Roseiflexus sp. RS-1 5207533 YP_001274968.1 CDS RoseRS_0596 NC_009523.1 743964 745370 D hypothetical protein 743964..745370 Roseiflexus sp. RS-1 5207534 YP_001274969.1 CDS RoseRS_0597 NC_009523.1 745374 746573 D hypothetical protein 745374..746573 Roseiflexus sp. RS-1 5207535 YP_001274970.1 CDS RoseRS_0598 NC_009523.1 746839 747408 D cold-shock DNA-binding domain-containing protein 746839..747408 Roseiflexus sp. RS-1 5207536 YP_001274971.1 CDS RoseRS_0599 NC_009523.1 747680 748003 R hypothetical protein complement(747680..748003) Roseiflexus sp. RS-1 5207537 YP_001274972.1 CDS RoseRS_0600 NC_009523.1 748643 748909 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(748643..748909) Roseiflexus sp. RS-1 5207538 YP_001274973.1 CDS RoseRS_0601 NC_009523.1 748906 749181 R PFAM: ribosomal protein L28; 50S ribosomal protein L28 complement(748906..749181) Roseiflexus sp. RS-1 5207539 YP_001274974.1 CDS RoseRS_0602 NC_009523.1 749205 749438 R hypothetical protein complement(749205..749438) Roseiflexus sp. RS-1 5207540 YP_001274975.1 CDS RoseRS_0603 NC_009523.1 749562 750428 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 749562..750428 Roseiflexus sp. RS-1 5207541 YP_001274976.1 CDS RoseRS_0604 NC_009523.1 750940 752226 D TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 750940..752226 Roseiflexus sp. RS-1 5207542 YP_001274977.1 CDS RoseRS_0605 NC_009523.1 752274 753542 R hypothetical protein complement(752274..753542) Roseiflexus sp. RS-1 5207543 YP_001274978.1 CDS RoseRS_0606 NC_009523.1 754081 755763 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 754081..755763 Roseiflexus sp. RS-1 5207544 YP_001274979.1 CDS RoseRS_0607 NC_009523.1 755825 756259 R hypothetical protein complement(755825..756259) Roseiflexus sp. RS-1 5207545 YP_001274980.1 CDS RoseRS_0608 NC_009523.1 756401 757240 R hypothetical protein complement(756401..757240) Roseiflexus sp. RS-1 5207546 YP_001274981.1 CDS RoseRS_0609 NC_009523.1 757233 758183 R PFAM: ApbE family lipoprotein; ApbE family lipoprotein complement(757233..758183) Roseiflexus sp. RS-1 5207547 YP_001274982.1 CDS RoseRS_0610 NC_009523.1 758194 758652 R hypothetical protein complement(758194..758652) Roseiflexus sp. RS-1 5207548 YP_001274983.1 CDS RoseRS_0611 NC_009523.1 758652 759404 R PFAM: Propeptide, PepSY amd peptidase M4; peptidase complement(758652..759404) Roseiflexus sp. RS-1 5207549 YP_001274984.1 CDS RoseRS_0612 NC_009523.1 759570 760253 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 759570..760253 Roseiflexus sp. RS-1 5207550 YP_001274985.1 CDS RoseRS_0613 NC_009523.1 760246 761673 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 760246..761673 Roseiflexus sp. RS-1 5207551 YP_001274986.1 CDS RoseRS_0614 NC_009523.1 762369 763250 D TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease, family 2; apurinic endonuclease Apn1 762369..763250 Roseiflexus sp. RS-1 5207552 YP_001274987.1 CDS RoseRS_0615 NC_009523.1 763275 764057 D hypothetical protein 763275..764057 Roseiflexus sp. RS-1 5207553 YP_001274988.1 CDS RoseRS_0616 NC_009523.1 764364 765590 D PFAM: peptidase M24; peptidase M24 764364..765590 Roseiflexus sp. RS-1 5207554 YP_001274989.1 CDS RoseRS_0617 NC_009523.1 765992 766249 R hypothetical protein complement(765992..766249) Roseiflexus sp. RS-1 5207555 YP_001274990.1 CDS RoseRS_0618 NC_009523.1 766665 768401 D hypothetical protein 766665..768401 Roseiflexus sp. RS-1 5207556 YP_001274991.1 CDS RoseRS_0619 NC_009523.1 768356 769318 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(768356..769318) Roseiflexus sp. RS-1 5207557 YP_001274992.1 CDS RoseRS_0620 NC_009523.1 769486 770508 R hypothetical protein complement(769486..770508) Roseiflexus sp. RS-1 5207558 YP_001274993.1 CDS RoseRS_0621 NC_009523.1 770756 771202 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(770756..771202) Roseiflexus sp. RS-1 5207559 YP_001274994.1 CDS RoseRS_0622 NC_009523.1 772524 773333 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 772524..773333 Roseiflexus sp. RS-1 5207560 YP_001274995.1 CDS RoseRS_0623 NC_009523.1 773340 775283 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 773340..775283 Roseiflexus sp. RS-1 5207561 YP_001274996.1 CDS RoseRS_0624 NC_009523.1 775301 776182 D PFAM: inner-membrane translocator; inner-membrane translocator 775301..776182 Roseiflexus sp. RS-1 5207562 YP_001274997.1 CDS RoseRS_0625 NC_009523.1 776198 777256 D PFAM: inner-membrane translocator; inner-membrane translocator 776198..777256 Roseiflexus sp. RS-1 5207563 YP_001274998.1 CDS RoseRS_0626 NC_009523.1 777278 778510 D branched-chain amino acid ABC transporter periplasmic component-like protein 777278..778510 Roseiflexus sp. RS-1 5207564 YP_001274999.1 CDS RoseRS_0627 NC_009523.1 778601 779401 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 778601..779401 Roseiflexus sp. RS-1 5207565 YP_001275000.1 CDS RoseRS_0628 NC_009523.1 779417 780640 D coenzyme F390 synthetase-like protein 779417..780640 Roseiflexus sp. RS-1 5207566 YP_001275001.1 CDS RoseRS_0629 NC_009523.1 781044 782208 R hypothetical protein complement(join(781044..781940,781942..782208)) Roseiflexus sp. RS-1 5207567 YP_001275002.1 CDS RoseRS_0630 NC_009523.1 782584 783006 D hypothetical protein 782584..783006 Roseiflexus sp. RS-1 5207568 YP_001275003.1 CDS RoseRS_0631 NC_009523.1 783066 783713 D hypothetical protein 783066..783713 Roseiflexus sp. RS-1 5207569 YP_001275004.1 CDS RoseRS_0632 NC_009523.1 784204 784602 R hypothetical protein complement(784204..784602) Roseiflexus sp. RS-1 5207570 YP_001275005.1 CDS RoseRS_0633 NC_009523.1 784599 785552 R PFAM: Fibronectin, type III domain protein; fibronectin, type III domain-containing protein complement(784599..785552) Roseiflexus sp. RS-1 5207571 YP_001275006.1 CDS RoseRS_0634 NC_009523.1 785780 787048 R hypothetical protein complement(785780..787048) Roseiflexus sp. RS-1 5207572 YP_001275007.1 CDS RoseRS_0635 NC_009523.1 787048 788105 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(787048..787575,787575..788105)) Roseiflexus sp. RS-1 5207573 YP_001275008.1 CDS RoseRS_0637 NC_009523.1 788653 788979 R hypothetical protein complement(788653..788979) Roseiflexus sp. RS-1 5207575 YP_001275009.1 CDS RoseRS_0639 NC_009523.1 789641 790210 R hypothetical protein complement(789641..790210) Roseiflexus sp. RS-1 5207577 YP_001275010.1 CDS RoseRS_0640 NC_009523.1 790385 791074 R hypothetical protein complement(790385..791074) Roseiflexus sp. RS-1 5207578 YP_001275011.1 CDS RoseRS_0641 NC_009523.1 791447 794347 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 791447..794347 Roseiflexus sp. RS-1 5207579 YP_001275012.1 CDS RoseRS_0642 NC_009523.1 794489 795544 R PFAM: proline racemase; proline racemase complement(794489..795544) Roseiflexus sp. RS-1 5207580 YP_001275013.1 CDS RoseRS_0643 NC_009523.1 795674 796090 R hypothetical protein complement(795674..796090) Roseiflexus sp. RS-1 5207581 YP_001275014.1 CDS RoseRS_0644 NC_009523.1 796156 796434 D hypothetical protein 796156..796434 Roseiflexus sp. RS-1 5207582 YP_001275015.1 CDS RoseRS_0645 NC_009523.1 798411 799358 R TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein complement(798411..799358) Roseiflexus sp. RS-1 5207583 YP_001275016.1 CDS RoseRS_0646 NC_009523.1 799453 800169 R TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein, CT1974; CRISPR-associated Cse3 family protein complement(799453..800169) Roseiflexus sp. RS-1 5207584 YP_001275017.1 CDS RoseRS_0647 NC_009523.1 800171 800959 R TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; CRISPR-associated Cas5 family protein complement(800171..800959) Roseiflexus sp. RS-1 5207585 YP_001275018.1 CDS RoseRS_0648 NC_009523.1 800956 802164 R TIGRFAM: CRISPR-associated protein, Cse4 family; CRISPR-associated Cse4 family protein complement(800956..802164) Roseiflexus sp. RS-1 5207586 YP_001275019.1 CDS RoseRS_0649 NC_009523.1 802231 802734 R TIGRFAM: CRISPR-associated protein, Cse2 family; CRISPR-associated Cse2 family protein complement(802231..802734) Roseiflexus sp. RS-1 5207587 YP_001275020.1 CDS RoseRS_0650 NC_009523.1 802727 804304 R TIGRFAM: CRISPR-associated protein, Cse1 family; CRISPR-associated Cse1 family protein complement(802727..804304) Roseiflexus sp. RS-1 5207588 YP_001275021.1 CDS RoseRS_0651 NC_009523.1 804301 807084 R TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; CRISPR-associated helicase Cas3 complement(804301..807084) Roseiflexus sp. RS-1 5207589 YP_001275022.1 CDS RoseRS_0652 NC_009523.1 807084 808082 R PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; regulatory protein DeoR complement(807084..808082) Roseiflexus sp. RS-1 5207590 YP_001275023.1 CDS RoseRS_0654 NC_009523.1 808842 809162 R hypothetical protein complement(808842..809162) Roseiflexus sp. RS-1 5207592 YP_001275024.1 CDS RoseRS_0655 NC_009523.1 809159 809374 R PFAM: protein of unknown function DUF433; hypothetical protein complement(809159..809374) Roseiflexus sp. RS-1 5207593 YP_001275025.1 CDS RoseRS_0656 NC_009523.1 809993 811039 R PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(809993..811039) Roseiflexus sp. RS-1 5207594 YP_001275026.1 CDS RoseRS_0657 NC_009523.1 811635 812942 D PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 811635..812942 Roseiflexus sp. RS-1 5207595 YP_001275027.1 CDS RoseRS_0658 NC_009523.1 812957 814273 D hypothetical protein 812957..814273 Roseiflexus sp. RS-1 5207596 YP_001275028.1 CDS RoseRS_0659 NC_009523.1 814979 822934 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 814979..822934 Roseiflexus sp. RS-1 5207597 YP_001275029.1 CDS RoseRS_0660 NC_009523.1 823150 825936 D hypothetical protein 823150..825936 Roseiflexus sp. RS-1 5207598 YP_001275030.1 CDS RoseRS_0661 NC_009523.1 825939 827816 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(825939..827816) Roseiflexus sp. RS-1 5207599 YP_001275031.1 CDS RoseRS_0662 NC_009523.1 827964 828494 R hypothetical protein complement(827964..828494) Roseiflexus sp. RS-1 5207600 YP_001275032.1 CDS RoseRS_0663 NC_009523.1 828816 829745 R PFAM: LmbE family protein; LmbE family protein complement(828816..829745) Roseiflexus sp. RS-1 5207601 YP_001275033.1 CDS RoseRS_0664 NC_009523.1 829894 831963 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 829894..831963 Roseiflexus sp. RS-1 5207602 YP_001275034.1 CDS RoseRS_0665 NC_009523.1 831964 832515 R hypothetical protein complement(831964..832515) Roseiflexus sp. RS-1 5207603 YP_001275035.1 CDS RoseRS_0666 NC_009523.1 832832 835501 D PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; protein kinase 832832..835501 Roseiflexus sp. RS-1 5207604 YP_001275036.1 CDS RoseRS_0667 NC_009523.1 835526 836488 D PFAM: putative esterase; putative esterase 835526..836488 Roseiflexus sp. RS-1 5207605 YP_001275037.1 CDS RoseRS_0668 NC_009523.1 836850 837146 D PFAM: protein of unknown function DUF77; hypothetical protein 836850..837146 Roseiflexus sp. RS-1 5207606 YP_001275038.1 CDS RoseRS_0669 NC_009523.1 837136 837954 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 837136..837954 Roseiflexus sp. RS-1 5207607 YP_001275039.1 CDS RoseRS_0670 NC_009523.1 837951 838937 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 837951..838937 Roseiflexus sp. RS-1 5207608 YP_001275040.1 CDS RoseRS_0671 NC_009523.1 838969 839736 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 838969..839736 Roseiflexus sp. RS-1 5207609 YP_001275041.1 CDS RoseRS_0673 NC_009523.1 841546 841782 D PFAM: protein of unknown function DUF433; hypothetical protein 841546..841782 Roseiflexus sp. RS-1 5207611 YP_001275042.1 CDS RoseRS_0674 NC_009523.1 841779 842087 D hypothetical protein 841779..842087 Roseiflexus sp. RS-1 5207612 YP_001275043.1 CDS RoseRS_0676 NC_009523.1 843017 843502 R hypothetical protein complement(843017..843502) Roseiflexus sp. RS-1 5207614 YP_001275044.1 CDS RoseRS_0677 NC_009523.1 843722 844075 R hypothetical protein complement(843722..844075) Roseiflexus sp. RS-1 5207615 YP_001275045.1 CDS RoseRS_0678 NC_009523.1 844156 845688 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Forkhead-associated protein; peptidase S8/S53 subtilisin kexin sedolisin complement(844156..845688) Roseiflexus sp. RS-1 5207616 YP_001275046.1 CDS RoseRS_0679 NC_009523.1 845692 846234 R hypothetical protein complement(845692..846234) Roseiflexus sp. RS-1 5207617 YP_001275047.1 CDS RoseRS_0680 NC_009523.1 846231 847055 R PFAM: metallophosphoesterase; metallophosphoesterase complement(846231..847055) Roseiflexus sp. RS-1 5207618 YP_001275048.1 CDS RoseRS_0681 NC_009523.1 847077 847214 R hypothetical protein complement(847077..847214) Roseiflexus sp. RS-1 5207619 YP_001275049.1 CDS RoseRS_0682 NC_009523.1 847362 847832 D PFAM: NUDIX hydrolase; NUDIX hydrolase 847362..847832 Roseiflexus sp. RS-1 5207620 YP_001275050.1 CDS RoseRS_0683 NC_009523.1 847836 849284 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 847836..849284 Roseiflexus sp. RS-1 5207621 YP_001275051.1 CDS RoseRS_0684 NC_009523.1 849370 849987 D PFAM: protein of unknown function DUF820; hypothetical protein 849370..849987 Roseiflexus sp. RS-1 5207622 YP_001275052.1 CDS RoseRS_0685 NC_009523.1 850087 850704 D PFAM: protein of unknown function DUF820; hypothetical protein 850087..850704 Roseiflexus sp. RS-1 5207623 YP_001275053.1 CDS RoseRS_0686 NC_009523.1 850773 853352 R hypothetical protein complement(850773..853352) Roseiflexus sp. RS-1 5207624 YP_001275054.1 CDS RoseRS_0687 NC_009523.1 853491 860279 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: RNA-processing protein, HAT helix repeating-containing protein; Tetratricopeptide domain protein; hypothetical protein complement(853491..860279) Roseiflexus sp. RS-1 5207625 YP_001275055.1 CDS RoseRS_0688 NC_009523.1 860462 860800 R hypothetical protein complement(860462..860800) Roseiflexus sp. RS-1 5207626 YP_001275056.1 CDS RoseRS_0689 NC_009523.1 860853 862205 R hypothetical protein complement(860853..862205) Roseiflexus sp. RS-1 5207627 YP_001275057.1 CDS RoseRS_0690 NC_009523.1 862250 863509 R PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase complement(862250..863509) Roseiflexus sp. RS-1 5207628 YP_001275058.1 CDS RoseRS_0691 NC_009523.1 863830 864513 D PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator 863830..864513 Roseiflexus sp. RS-1 5207629 YP_001275059.1 CDS RoseRS_0692 NC_009523.1 864516 865487 R PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase complement(864516..865487) Roseiflexus sp. RS-1 5207630 YP_001275060.1 CDS RoseRS_0693 NC_009523.1 865866 866798 R PFAM: PfkB domain protein; 1-phosphofructokinase complement(865866..866798) Roseiflexus sp. RS-1 5207631 YP_001275061.1 CDS RoseRS_0695 NC_009523.1 868104 868370 D PFAM: protein of unknown function DUF433; hypothetical protein 868104..868370 Roseiflexus sp. RS-1 5207634 YP_001275062.1 CDS RoseRS_0696 NC_009523.1 868367 868726 D hypothetical protein 868367..868726 Roseiflexus sp. RS-1 5207635 YP_001275063.1 CDS RoseRS_0697 NC_009523.1 868914 870386 D TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 868914..870386 Roseiflexus sp. RS-1 5207636 YP_001275064.1 CDS RoseRS_0698 NC_009523.1 870432 870647 R TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; copper ion binding protein complement(870432..870647) Roseiflexus sp. RS-1 5207637 YP_001275065.1 CDS RoseRS_0699 NC_009523.1 870848 872311 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 870848..872311 Roseiflexus sp. RS-1 5207638 YP_001275066.1 CDS RoseRS_0700 NC_009523.1 872336 873184 D hypothetical protein 872336..873184 Roseiflexus sp. RS-1 5207639 YP_001275067.1 CDS RoseRS_0701 NC_009523.1 873184 873996 D hypothetical protein 873184..873996 Roseiflexus sp. RS-1 5207640 YP_001275068.1 CDS RoseRS_0702 NC_009523.1 874176 875171 R PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase complement(874176..875171) Roseiflexus sp. RS-1 5207641 YP_001275069.1 CDS RoseRS_0703 NC_009523.1 875445 876617 D PFAM: aminotransferase, class I and II; class I/II aminotransferase 875445..876617 Roseiflexus sp. RS-1 5207642 YP_001275070.1 CDS RoseRS_0704 NC_009523.1 876856 877683 D PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; putative 6-pyruvoyl tetrahydropterin synthase 876856..877683 Roseiflexus sp. RS-1 5207643 YP_001275071.1 CDS RoseRS_0705 NC_009523.1 877861 878541 D PFAM: GTP cyclohydrolase I; GTP cyclohydrolase I 877861..878541 Roseiflexus sp. RS-1 5207644 YP_001275072.1 CDS RoseRS_0706 NC_009523.1 878674 879387 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 878674..879387 Roseiflexus sp. RS-1 5207645 YP_001275073.1 CDS RoseRS_0707 NC_009523.1 879481 880110 D PFAM: regulatory protein, DeoR; regulatory protein, ArsR; transcriptional regulator TrmB; transcriptional regulator TrmB 879481..880110 Roseiflexus sp. RS-1 5207646 YP_001275074.1 CDS RoseRS_0708 NC_009523.1 880157 880939 D TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 880157..880939 Roseiflexus sp. RS-1 5207647 YP_001275075.1 CDS RoseRS_0709 NC_009523.1 880936 882153 D TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; FeS assembly protein SufD 880936..882153 Roseiflexus sp. RS-1 5207648 YP_001275076.1 CDS RoseRS_0710 NC_009523.1 882167 883411 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase, class V; SufS subfamily cysteine desulfurase 882167..883411 Roseiflexus sp. RS-1 5207649 YP_001275077.1 CDS RoseRS_0711 NC_009523.1 883417 883815 D TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; NifU family SUF system FeS assembly protein 883417..883815 Roseiflexus sp. RS-1 5207650 YP_001275078.1 CDS RoseRS_0712 NC_009523.1 883842 885257 D TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; FeS assembly protein SufB 883842..885257 Roseiflexus sp. RS-1 5207651 YP_001275079.1 CDS RoseRS_0713 NC_009523.1 885421 885717 R hypothetical protein complement(885421..885717) Roseiflexus sp. RS-1 5207652 YP_001275080.1 CDS RoseRS_0714 NC_009523.1 885704 886081 R PFAM: protein of unknown function DUF497; hypothetical protein complement(885704..886081) Roseiflexus sp. RS-1 5207653 YP_001275081.1 CDS RoseRS_0715 NC_009523.1 886264 886674 D hypothetical protein 886264..886674 Roseiflexus sp. RS-1 5207654 YP_001275082.1 CDS RoseRS_0716 NC_009523.1 886764 887081 D PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 886764..887081 Roseiflexus sp. RS-1 5207655 YP_001275083.1 CDS RoseRS_0717 NC_009523.1 887174 888019 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 887174..888019 Roseiflexus sp. RS-1 5207656 YP_001275084.1 CDS RoseRS_0718 NC_009523.1 888031 888483 D PFAM: Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 888031..888483 Roseiflexus sp. RS-1 5207657 YP_001275085.1 CDS RoseRS_0719 NC_009523.1 888483 888872 D PFAM: nitrogen-fixing NifU domain protein; NifU domain-containing protein 888483..888872 Roseiflexus sp. RS-1 5207658 YP_001275086.1 CDS RoseRS_0720 NC_009523.1 888869 889834 D TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase 888869..889834 Roseiflexus sp. RS-1 5207659 YP_001275087.1 CDS RoseRS_0721 NC_009523.1 890017 890490 D PFAM: Mov34/MPN/PAD-1 family protein; Mov34/MPN/PAD-1 family protein 890017..890490 Roseiflexus sp. RS-1 5207660 YP_001275088.1 CDS RoseRS_0722 NC_009523.1 890759 891037 D PFAM: thiamineS protein; hypothetical protein 890759..891037 Roseiflexus sp. RS-1 5207661 YP_001275089.1 CDS RoseRS_0723 NC_009523.1 891150 892301 D PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; UBA/THIF-type NAD/FAD binding protein 891150..892301 Roseiflexus sp. RS-1 5207662 YP_001275090.1 CDS secG NC_009523.1 892373 892582 D preprotein translocase subunit SecG 892373..892582 Roseiflexus sp. RS-1 5207663 YP_001275091.1 CDS RoseRS_0725 NC_009523.1 892657 894327 D PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein 892657..894327 Roseiflexus sp. RS-1 5207664 YP_001275092.1 CDS RoseRS_0726 NC_009523.1 894348 895223 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 894348..895223 Roseiflexus sp. RS-1 5207665 YP_001275093.1 CDS RoseRS_0727 NC_009523.1 895501 898710 D TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 895501..898710 Roseiflexus sp. RS-1 5207666 YP_001275094.1 CDS RoseRS_0728 NC_009523.1 898875 899906 R PFAM: protein of unknown function DUF820; hypothetical protein complement(898875..899906) Roseiflexus sp. RS-1 5207667 YP_001275095.1 CDS RoseRS_0729 NC_009523.1 899925 902396 R TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; DNA gyrase subunit A complement(899925..902396) Roseiflexus sp. RS-1 5207668 YP_001275096.1 CDS RoseRS_0730 NC_009523.1 902519 903250 R PFAM: metallophosphoesterase; metallophosphoesterase complement(902519..903250) Roseiflexus sp. RS-1 5207669 YP_001275097.1 CDS RoseRS_0731 NC_009523.1 903523 906222 D PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; type III restriction enzyme, res subunit 903523..906222 Roseiflexus sp. RS-1 5207670 YP_001275098.1 CDS RoseRS_0732 NC_009523.1 906239 907309 D hypothetical protein 906239..907309 Roseiflexus sp. RS-1 5207671 YP_001275099.1 CDS RoseRS_0733 NC_009523.1 907775 908188 D PFAM: transposase IS200-family protein; transposase IS200-family protein 907775..908188 Roseiflexus sp. RS-1 5207672 YP_001275100.1 CDS RoseRS_0734 NC_009523.1 908611 910215 D PFAM: N-6 DNA methylase; N-6 DNA methylase 908611..910215 Roseiflexus sp. RS-1 5207673 YP_001275101.1 CDS RoseRS_0735 NC_009523.1 910212 911390 D PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 910212..911390 Roseiflexus sp. RS-1 5207674 YP_001275102.1 CDS RoseRS_0736 NC_009523.1 911394 913571 D PFAM: putative RNA methylase; N-6 DNA methylase; methyltransferase small; N-6 DNA methylase 911394..913571 Roseiflexus sp. RS-1 5207675 YP_001275103.1 CDS RoseRS_0737 NC_009523.1 913568 915097 D hypothetical protein 913568..915097 Roseiflexus sp. RS-1 5207676 YP_001275104.1 CDS RoseRS_0738 NC_009523.1 915336 916367 D hypothetical protein 915336..916367 Roseiflexus sp. RS-1 5207677 YP_001275105.1 CDS RoseRS_0739 NC_009523.1 917125 917814 R PFAM: phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase complement(917125..917814) Roseiflexus sp. RS-1 5207678 YP_001275106.1 CDS RoseRS_0740 NC_009523.1 917908 919212 R hypothetical protein complement(917908..919212) Roseiflexus sp. RS-1 5207679 YP_001275107.1 CDS RoseRS_0741 NC_009523.1 919228 919746 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(919228..919746) Roseiflexus sp. RS-1 5207680 YP_001275108.1 CDS RoseRS_0742 NC_009523.1 919837 920970 R hypothetical protein complement(919837..920970) Roseiflexus sp. RS-1 5207681 YP_001275109.1 CDS RoseRS_0743 NC_009523.1 920981 921856 R PFAM: D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase complement(920981..921856) Roseiflexus sp. RS-1 5207682 YP_001275110.1 CDS panC NC_009523.1 921934 922770 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(921934..922770) Roseiflexus sp. RS-1 5207683 YP_001275111.1 CDS panB NC_009523.1 922777 923613 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(922777..923613) Roseiflexus sp. RS-1 5207684 YP_001275112.1 CDS RoseRS_0746 NC_009523.1 923688 924056 R PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein complement(923688..924056) Roseiflexus sp. RS-1 5207685 YP_001275113.1 CDS RoseRS_0747 NC_009523.1 924275 925582 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(924275..925582) Roseiflexus sp. RS-1 5207686 YP_001275114.1 CDS RoseRS_0748 NC_009523.1 925617 926543 R PFAM: peptidase T2, asparaginase 2; asparaginase complement(925617..926543) Roseiflexus sp. RS-1 5207687 YP_001275115.1 CDS RoseRS_0749 NC_009523.1 926540 927427 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(926540..927427) Roseiflexus sp. RS-1 5207688 YP_001275116.1 CDS RoseRS_0750 NC_009523.1 927411 928670 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(927411..928670) Roseiflexus sp. RS-1 5207689 YP_001275117.1 CDS RoseRS_0751 NC_009523.1 930029 931086 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(930029..930559,930559..931086) Roseiflexus sp. RS-1 5207690 YP_001275118.1 CDS RoseRS_0752 NC_009523.1 931815 932840 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(931815..932840) Roseiflexus sp. RS-1 5207691 YP_001275119.1 CDS RoseRS_0753 NC_009523.1 933490 934125 D TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA 933490..934125 Roseiflexus sp. RS-1 5207692 YP_001275120.1 CDS RoseRS_0754 NC_009523.1 934172 934918 D PFAM: cytochrome c-type biogenesis protein CcmB; cytochrome c-type biogenesis protein CcmB 934172..934918 Roseiflexus sp. RS-1 5207693 YP_001275121.1 CDS RoseRS_0755 NC_009523.1 934978 935985 D PFAM: cytochrome c assembly protein; cytochrome c assembly protein 934978..935985 Roseiflexus sp. RS-1 5207694 YP_001275122.1 CDS RoseRS_0756 NC_009523.1 935969 936199 D hypothetical protein 935969..936199 Roseiflexus sp. RS-1 5207695 YP_001275123.1 CDS RoseRS_0757 NC_009523.1 936222 936641 D hypothetical protein 936222..936641 Roseiflexus sp. RS-1 5207696 YP_001275124.1 CDS RoseRS_0758 NC_009523.1 936660 939023 D PFAM: cytochrome c assembly protein; cytochrome c assembly protein 936660..939023 Roseiflexus sp. RS-1 5207697 YP_001275125.1 CDS RoseRS_0759 NC_009523.1 939026 940003 D PFAM: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 939026..940003 Roseiflexus sp. RS-1 5207698 YP_001275126.1 CDS RoseRS_0760 NC_009523.1 940170 940856 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase 940170..940856 Roseiflexus sp. RS-1 5207699 YP_001275127.1 CDS RoseRS_0761 NC_009523.1 940843 941532 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 940843..941532 Roseiflexus sp. RS-1 5207700 YP_001275128.1 CDS RoseRS_0762 NC_009523.1 941665 942768 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 941665..942768 Roseiflexus sp. RS-1 5207701 YP_001275129.1 CDS proA NC_009523.1 942973 944244 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 942973..944244 Roseiflexus sp. RS-1 5207702 YP_001275130.1 CDS RoseRS_0764 NC_009523.1 944265 945059 R TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; dihydroorotate dehydrogenase family protein complement(944265..945059) Roseiflexus sp. RS-1 5207703 YP_001275131.1 CDS RoseRS_0765 NC_009523.1 945215 946423 D PFAM: cytochrome P450; cytochrome P450 945215..946423 Roseiflexus sp. RS-1 5207704 YP_001275132.1 CDS RoseRS_0766 NC_009523.1 946444 947355 R hypothetical protein complement(946444..947355) Roseiflexus sp. RS-1 5207705 YP_001275133.1 CDS radC NC_009523.1 947610 948311 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 947610..948311 Roseiflexus sp. RS-1 5207706 YP_001275134.1 CDS RoseRS_0768 NC_009523.1 948409 950319 D PFAM: VanW family protein; VanW family protein 948409..950319 Roseiflexus sp. RS-1 5207707 YP_001275135.1 CDS RoseRS_0769 NC_009523.1 950518 950940 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 950518..950940 Roseiflexus sp. RS-1 5207708 YP_001275136.1 CDS RoseRS_0770 NC_009523.1 950937 951368 D PFAM: protein of unknown function DUF86; hypothetical protein 950937..951368 Roseiflexus sp. RS-1 5207709 YP_001275137.1 CDS RoseRS_0771 NC_009523.1 951365 952633 D hypothetical protein 951365..952633 Roseiflexus sp. RS-1 5207710 YP_001275138.1 CDS ndk NC_009523.1 952958 953407 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(952958..953407) Roseiflexus sp. RS-1 5207711 YP_001275139.1 CDS RoseRS_0773 NC_009523.1 953552 953911 R PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein complement(953552..953911) Roseiflexus sp. RS-1 5207712 YP_001275140.1 CDS RoseRS_0774 NC_009523.1 953954 958558 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(953954..958558) Roseiflexus sp. RS-1 5207713 YP_001275141.1 CDS RoseRS_0776 NC_009523.1 959420 960745 R hypothetical protein complement(959420..960745) Roseiflexus sp. RS-1 5207716 YP_001275142.1 CDS RoseRS_0777 NC_009523.1 961106 962068 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 961106..962068 Roseiflexus sp. RS-1 5207717 YP_001275143.1 CDS RoseRS_0778 NC_009523.1 962131 962784 R PFAM: deoxynucleoside kinase; deoxynucleoside kinase complement(962131..962784) Roseiflexus sp. RS-1 5207718 YP_001275144.1 CDS RoseRS_0779 NC_009523.1 962806 964869 R PFAM: glycosyl transferase, family 39; glycosyl transferase family protein complement(962806..964869) Roseiflexus sp. RS-1 5207719 YP_001275145.1 CDS RoseRS_0780 NC_009523.1 965178 967313 R PFAM: glycosyl transferase, group 1; Methyltransferase type 11; Methyltransferase type 12; group 1 glycosyl transferase complement(965178..967313) Roseiflexus sp. RS-1 5207720 YP_001275146.1 CDS RoseRS_0781 NC_009523.1 968118 969179 D PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase 968118..969179 Roseiflexus sp. RS-1 5207724 YP_001275147.1 CDS RoseRS_0783 NC_009523.1 970133 970534 D PFAM: globin; globin 970133..970534 Roseiflexus sp. RS-1 5207726 YP_001275148.1 CDS RoseRS_0784 NC_009523.1 970612 971253 D PFAM: CBS domain containing protein; signal-transduction protein 970612..971253 Roseiflexus sp. RS-1 5207727 YP_001275149.1 CDS RoseRS_0785 NC_009523.1 971316 972677 R TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; NADP-dependent isocitrate dehydrogenase complement(971316..972677) Roseiflexus sp. RS-1 5207728 YP_001275150.1 CDS RoseRS_0786 NC_009523.1 972934 975069 D SMART: Parallel beta-helix repeat; parallel beta-helix repeat-containing protein 972934..975069 Roseiflexus sp. RS-1 5207729 YP_001275151.1 CDS RoseRS_0787 NC_009523.1 975815 976768 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(975815..976768) Roseiflexus sp. RS-1 5207730 YP_001275152.1 CDS RoseRS_0788 NC_009523.1 977200 978162 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(977200..978162) Roseiflexus sp. RS-1 5207731 YP_001275153.1 CDS RoseRS_0789 NC_009523.1 978548 979960 D phytoene dehydrogenase-like protein 978548..979960 Roseiflexus sp. RS-1 5207732 YP_001275154.1 CDS RoseRS_0790 NC_009523.1 979924 981042 R TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(979924..981042) Roseiflexus sp. RS-1 5207733 YP_001275155.1 CDS RoseRS_0791 NC_009523.1 981069 981848 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(981069..981848) Roseiflexus sp. RS-1 5207734 YP_001275156.1 CDS RoseRS_0792 NC_009523.1 981853 982749 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(981853..982749) Roseiflexus sp. RS-1 5207735 YP_001275157.1 CDS RoseRS_0793 NC_009523.1 983225 984457 R Fe3+ ABC transporter periplasmic component-like protein complement(983225..984457) Roseiflexus sp. RS-1 5207736 YP_001275158.1 CDS RoseRS_0794 NC_009523.1 984796 986325 D TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramyl tripeptide synthetase 984796..986325 Roseiflexus sp. RS-1 5207737 YP_001275159.1 CDS RoseRS_0795 NC_009523.1 986397 987455 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein 986397..987455 Roseiflexus sp. RS-1 5207738 YP_001275160.1 CDS RoseRS_0796 NC_009523.1 988551 989525 R PFAM: Acetyl xylan esterase; Acetyl xylan esterase complement(988551..989525) Roseiflexus sp. RS-1 5207739 YP_001275161.1 CDS RoseRS_0797 NC_009523.1 989671 990582 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PDZ/DHR/GLGF domain-containing protein 989671..990582 Roseiflexus sp. RS-1 5207740 YP_001275162.1 CDS RoseRS_0798 NC_009523.1 990700 991590 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; peptidase S1 and S6, chymotrypsin/Hap 990700..991590 Roseiflexus sp. RS-1 5207741 YP_001275163.1 CDS RoseRS_0799 NC_009523.1 991965 992579 D PFAM: regulatory protein, LuxR; response regulator receiver protein 991965..992579 Roseiflexus sp. RS-1 5207742 YP_001275164.1 CDS RoseRS_0800 NC_009523.1 992631 993122 D binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps 992631..993122 Roseiflexus sp. RS-1 5207743 YP_001275165.1 CDS RoseRS_0801 NC_009523.1 993472 994344 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(993472..994344) Roseiflexus sp. RS-1 5207744 YP_001275166.1 CDS RoseRS_0802 NC_009523.1 994341 995333 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(994341..995333) Roseiflexus sp. RS-1 5207745 YP_001275167.1 CDS RoseRS_0803 NC_009523.1 995605 996912 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(995605..996912) Roseiflexus sp. RS-1 5207746 YP_001275168.1 CDS RoseRS_0804 NC_009523.1 997056 998132 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(997056..998132) Roseiflexus sp. RS-1 5207747 YP_001275169.1 CDS RoseRS_0805 NC_009523.1 998119 998808 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(998119..998808) Roseiflexus sp. RS-1 5207748 YP_001275170.1 CDS RoseRS_0806 NC_009523.1 998783 999307 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase complement(998783..999307) Roseiflexus sp. RS-1 5207749 YP_001275171.1 CDS RoseRS_0807 NC_009523.1 999304 1000107 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(999304..1000107) Roseiflexus sp. RS-1 5207750 YP_001275172.1 CDS RoseRS_0808 NC_009523.1 1001070 1002032 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 1001070..1002032 Roseiflexus sp. RS-1 5207751 YP_001275173.1 CDS RoseRS_0809 NC_009523.1 1002050 1002376 D PFAM: protein of unknown function DUF59; hypothetical protein 1002050..1002376 Roseiflexus sp. RS-1 5207752 YP_001275174.1 CDS RoseRS_0810 NC_009523.1 1002400 1003092 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1002400..1003092 Roseiflexus sp. RS-1 5207753 YP_001275175.1 CDS RoseRS_0811 NC_009523.1 1003158 1004153 D PFAM: SufBD protein; SufBD protein 1003158..1004153 Roseiflexus sp. RS-1 5207754 YP_001275176.1 CDS RoseRS_0812 NC_009523.1 1004568 1006325 R TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; sulfate transporter complement(1004568..1006325) Roseiflexus sp. RS-1 5207755 YP_001275177.1 CDS RoseRS_0813 NC_009523.1 1006346 1006843 R PFAM: protein of unknown function DUF442; hypothetical protein complement(1006346..1006843) Roseiflexus sp. RS-1 5207756 YP_001275178.1 CDS RoseRS_0814 NC_009523.1 1006869 1007459 R hypothetical protein complement(1006869..1007459) Roseiflexus sp. RS-1 5207757 YP_001275179.1 CDS RoseRS_0815 NC_009523.1 1007501 1007752 R PFAM: SirA family protein; SirA family protein complement(1007501..1007752) Roseiflexus sp. RS-1 5207758 YP_001275180.1 CDS RoseRS_0816 NC_009523.1 1007786 1008967 R PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; beta-lactamase domain-containing protein complement(1007786..1008967) Roseiflexus sp. RS-1 5207759 YP_001275181.1 CDS RoseRS_0817 NC_009523.1 1010217 1011293 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(1010217..1011293) Roseiflexus sp. RS-1 5207760 YP_001275182.1 CDS RoseRS_0818 NC_009523.1 1011466 1011705 D hypothetical protein 1011466..1011705 Roseiflexus sp. RS-1 5207761 YP_001275183.1 CDS RoseRS_0819 NC_009523.1 1011750 1013252 D PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 1011750..1013252 Roseiflexus sp. RS-1 5207762 YP_001275184.1 CDS RoseRS_0820 NC_009523.1 1013308 1015710 R PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; cell division protein FtsK complement(1013308..1015710) Roseiflexus sp. RS-1 5207763 YP_001275185.1 CDS RoseRS_0821 NC_009523.1 1016949 1017911 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(1016949..1017911) Roseiflexus sp. RS-1 5207764 YP_001275186.1 CDS RoseRS_0822 NC_009523.1 1018277 1019848 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(1018277..1019848) Roseiflexus sp. RS-1 5207765 YP_001275187.1 CDS RoseRS_0823 NC_009523.1 1019868 1022900 R TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; preprotein translocase subunit SecA complement(1019868..1022900) Roseiflexus sp. RS-1 5207766 YP_001275188.1 CDS RoseRS_0824 NC_009523.1 1023240 1024949 D glycosyltransferase 1023240..1024949 Roseiflexus sp. RS-1 5207767 YP_001275189.1 CDS RoseRS_0825 NC_009523.1 1024952 1025542 D MobA-like protein 1024952..1025542 Roseiflexus sp. RS-1 5207768 YP_001275190.1 CDS RoseRS_0826 NC_009523.1 1025556 1026548 D PFAM: molybdopterin binding domain; molybdopterin binding domain-containing protein 1025556..1026548 Roseiflexus sp. RS-1 5207769 YP_001275191.1 CDS RoseRS_0827 NC_009523.1 1026705 1028822 R TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX complement(1026705..1028822) Roseiflexus sp. RS-1 5207771 YP_001275192.1 CDS RoseRS_0828 NC_009523.1 1029067 1029597 D TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 1029067..1029597 Roseiflexus sp. RS-1 5207772 YP_001275193.1 CDS RoseRS_0829 NC_009523.1 1030174 1031685 R PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase complement(1030174..1031685) Roseiflexus sp. RS-1 5207773 YP_001275194.1 CDS RoseRS_0830 NC_009523.1 1031844 1032323 D hypothetical protein 1031844..1032323 Roseiflexus sp. RS-1 5207774 YP_001275195.1 CDS RoseRS_0831 NC_009523.1 1032440 1033261 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; parB-like partition protein complement(1032440..1033261) Roseiflexus sp. RS-1 5207775 YP_001275196.1 CDS RoseRS_0832 NC_009523.1 1034230 1034526 R PFAM: protein of unknown function DUF497; hypothetical protein complement(1034230..1034526) Roseiflexus sp. RS-1 5207776 YP_001275197.1 CDS RoseRS_0833 NC_009523.1 1034765 1035415 R hypothetical protein complement(1034765..1035415) Roseiflexus sp. RS-1 5207777 YP_001275198.1 CDS RoseRS_0834 NC_009523.1 1035514 1036571 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(1035514..1036044,1036044..1036571) Roseiflexus sp. RS-1 5207778 YP_001275199.1 CDS RoseRS_0835 NC_009523.1 1036755 1037648 R hypothetical protein complement(1036755..1037648) Roseiflexus sp. RS-1 5207779 YP_001275200.1 CDS RoseRS_0836 NC_009523.1 1037790 1038584 R hypothetical protein complement(1037790..1038584) Roseiflexus sp. RS-1 5207780 YP_001275201.1 CDS RoseRS_0837 NC_009523.1 1038674 1039426 R hypothetical protein complement(1038674..1039426) Roseiflexus sp. RS-1 5207781 YP_001275202.1 CDS RoseRS_0838 NC_009523.1 1039528 1040541 R hypothetical protein complement(1039528..1040541) Roseiflexus sp. RS-1 5207782 YP_001275203.1 CDS RoseRS_0839 NC_009523.1 1041538 1042344 R hypothetical protein complement(1041538..1042344) Roseiflexus sp. RS-1 5207783 YP_001275204.1 CDS RoseRS_0840 NC_009523.1 1042504 1043463 D TIGRFAM: integron integrase; PFAM: phage integrase family protein; integron integrase 1042504..1043463 Roseiflexus sp. RS-1 5207784 YP_001275205.1 CDS RoseRS_0842 NC_009523.1 1044138 1045337 R TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase complement(1044138..1045337) Roseiflexus sp. RS-1 5207786 YP_001275206.1 CDS RoseRS_0843 NC_009523.1 1045694 1047517 R PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; 5'-nucleotidase domain-containing protein complement(1045694..1047517) Roseiflexus sp. RS-1 5207787 YP_001275207.1 CDS RoseRS_0844 NC_009523.1 1047944 1048294 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1047944..1048294 Roseiflexus sp. RS-1 5207788 YP_001275208.1 CDS RoseRS_0845 NC_009523.1 1049054 1049626 R hypothetical protein complement(1049054..1049626) Roseiflexus sp. RS-1 5207791 YP_001275209.1 CDS RoseRS_0846 NC_009523.1 1049781 1050998 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1049781..1050998) Roseiflexus sp. RS-1 5207792 YP_001275210.1 CDS RoseRS_0847 NC_009523.1 1051015 1052127 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1051015..1052127) Roseiflexus sp. RS-1 5207793 YP_001275211.1 CDS RoseRS_0848 NC_009523.1 1052155 1053828 R hypothetical protein complement(1052155..1053828) Roseiflexus sp. RS-1 5207794 YP_001275212.1 CDS RoseRS_0849 NC_009523.1 1053831 1054682 R PFAM: putative RNA methylase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(1053831..1054682) Roseiflexus sp. RS-1 5207795 YP_001275213.1 CDS RoseRS_0850 NC_009523.1 1054679 1056844 R hypothetical protein complement(1054679..1056844) Roseiflexus sp. RS-1 5207796 YP_001275214.1 CDS RoseRS_0851 NC_009523.1 1056849 1058846 R hypothetical protein complement(1056849..1058846) Roseiflexus sp. RS-1 5207797 YP_001275215.1 CDS RoseRS_0852 NC_009523.1 1058894 1060993 R hypothetical protein complement(1058894..1060993) Roseiflexus sp. RS-1 5207798 YP_001275216.1 CDS RoseRS_0853 NC_009523.1 1061001 1062740 R hypothetical protein complement(1061001..1062740) Roseiflexus sp. RS-1 5207799 YP_001275217.1 CDS RoseRS_0854 NC_009523.1 1062904 1065201 R hypothetical protein complement(1062904..1065201) Roseiflexus sp. RS-1 5207800 YP_001275218.1 CDS RoseRS_0855 NC_009523.1 1065399 1066478 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1065399..1066478 Roseiflexus sp. RS-1 5207801 YP_001275219.1 CDS RoseRS_0856 NC_009523.1 1066673 1069354 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 1066673..1069354 Roseiflexus sp. RS-1 5207802 YP_001275220.1 CDS RoseRS_0857 NC_009523.1 1069272 1070549 R hypothetical protein complement(1069272..1070549) Roseiflexus sp. RS-1 5207803 YP_001275221.1 CDS RoseRS_0858 NC_009523.1 1070675 1071898 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1070675..1071898) Roseiflexus sp. RS-1 5207804 YP_001275222.1 CDS RoseRS_0859 NC_009523.1 1072088 1073011 D hypothetical protein 1072088..1073011 Roseiflexus sp. RS-1 5207805 YP_001275223.1 CDS RoseRS_0860 NC_009523.1 1073023 1074036 D PFAM: phage integrase family protein; phage integrase family protein 1073023..1074036 Roseiflexus sp. RS-1 5207806 YP_001275224.1 CDS RoseRS_0861 NC_009523.1 1074149 1075363 D PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1074149..1075363 Roseiflexus sp. RS-1 5207807 YP_001275225.1 CDS RoseRS_0862 NC_009523.1 1075779 1077371 R TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; glycyl-tRNA synthetase complement(1075779..1077371) Roseiflexus sp. RS-1 5207808 YP_001275226.1 CDS RoseRS_0863 NC_009523.1 1077615 1078556 R PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; phage integrase family protein complement(1077615..1078556) Roseiflexus sp. RS-1 5207809 YP_001275227.1 CDS RoseRS_0864 NC_009523.1 1078699 1079748 R TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; dihydroorotate dehydrogenase; nifR3 family TIM-barrel protein complement(1078699..1079748) Roseiflexus sp. RS-1 5207810 YP_001275228.1 CDS RoseRS_0865 NC_009523.1 1080055 1081389 R PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; virulence factor MVIN family protein complement(1080055..1081389) Roseiflexus sp. RS-1 5207811 YP_001275229.1 CDS RoseRS_0866 NC_009523.1 1081386 1082372 R PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase complement(1081386..1082372) Roseiflexus sp. RS-1 5207812 YP_001275230.1 CDS RoseRS_0867 NC_009523.1 1082359 1083957 R hypothetical protein complement(1082359..1083957) Roseiflexus sp. RS-1 5207813 YP_001275231.1 CDS RoseRS_0868 NC_009523.1 1084112 1084987 D PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 1084112..1084987 Roseiflexus sp. RS-1 5207814 YP_001275232.1 CDS RoseRS_0870 NC_009523.1 1085633 1086595 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(1085633..1086595) Roseiflexus sp. RS-1 5207816 YP_001275233.1 CDS RoseRS_0871 NC_009523.1 1087924 1088136 D hypothetical protein 1087924..1088136 Roseiflexus sp. RS-1 5207817 YP_001275234.1 CDS RoseRS_0872 NC_009523.1 1088142 1088528 D hypothetical protein 1088142..1088528 Roseiflexus sp. RS-1 5207818 YP_001275235.1 CDS RoseRS_0873 NC_009523.1 1088638 1089198 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-like protein 1088638..1089198 Roseiflexus sp. RS-1 5207819 YP_001275236.1 CDS RoseRS_0874 NC_009523.1 1089205 1089780 D hypothetical protein 1089205..1089780 Roseiflexus sp. RS-1 5207820 YP_001275237.1 CDS RoseRS_0875 NC_009523.1 1089899 1091584 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein 1089899..1091584 Roseiflexus sp. RS-1 5207821 YP_001275238.1 CDS RoseRS_0876 NC_009523.1 1092127 1092792 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(1092127..1092792) Roseiflexus sp. RS-1 5207822 YP_001275239.1 CDS RoseRS_0877 NC_009523.1 1092809 1093663 R hypothetical protein complement(1092809..1093663) Roseiflexus sp. RS-1 5207823 YP_001275240.1 CDS RoseRS_0878 NC_009523.1 1093845 1094489 D hypothetical protein 1093845..1094489 Roseiflexus sp. RS-1 5207824 YP_001275241.1 CDS RoseRS_0879 NC_009523.1 1094559 1095395 D PFAM: alpha/beta hydrolase fold; PGAP1 family protein; alpha/beta hydrolase fold protein 1094559..1095395 Roseiflexus sp. RS-1 5207825 YP_001275242.1 CDS RoseRS_0880 NC_009523.1 1095547 1095783 D TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein 1095547..1095783 Roseiflexus sp. RS-1 5207826 YP_001275243.1 CDS RoseRS_0881 NC_009523.1 1095812 1096807 D PFAM: Nucleotidyl transferase; nucleotidyl transferase 1095812..1096807 Roseiflexus sp. RS-1 5207827 YP_001275244.1 CDS RoseRS_0882 NC_009523.1 1096828 1097964 D hypothetical protein 1096828..1097964 Roseiflexus sp. RS-1 5207828 YP_001275245.1 CDS RoseRS_0883 NC_009523.1 1097909 1099000 R PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; magnesium chelatase complement(1097909..1099000) Roseiflexus sp. RS-1 5207829 YP_001275246.1 CDS RoseRS_0884 NC_009523.1 1099009 1099293 R PFAM: protein of unknown function DUF503; hypothetical protein complement(1099009..1099293) Roseiflexus sp. RS-1 5207830 YP_001275247.1 CDS RoseRS_0885 NC_009523.1 1099312 1100010 R PFAM: peptidase S16, lon domain protein; peptidase S16, lon domain-containing protein complement(1099312..1100010) Roseiflexus sp. RS-1 5207831 YP_001275248.1 CDS RoseRS_0886 NC_009523.1 1100014 1101213 R TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ complement(1100014..1101213) Roseiflexus sp. RS-1 5207832 YP_001275249.1 CDS RoseRS_0887 NC_009523.1 1101214 1102404 R SMART: PUA domain containing protein; PUA domain-containing protein complement(1101214..1102404) Roseiflexus sp. RS-1 5207833 YP_001275250.1 CDS RoseRS_0888 NC_009523.1 1102534 1103217 R PFAM: protein of unknown function DUF1498; hypothetical protein complement(1102534..1103217) Roseiflexus sp. RS-1 5207834 YP_001275251.1 CDS RoseRS_0889 NC_009523.1 1103378 1104643 D hypothetical protein 1103378..1104643 Roseiflexus sp. RS-1 5207835 YP_001275252.1 CDS RoseRS_0892 NC_009523.1 1105992 1108082 D PFAM: WD-40 repeat protein; SMP-30/Gluconolaconase/LRE domain protein; WD-40 repeat-containing protein 1105992..1108082 Roseiflexus sp. RS-1 5207838 YP_001275253.1 CDS RoseRS_0893 NC_009523.1 1108788 1109885 R hypothetical protein complement(1108788..1109885) Roseiflexus sp. RS-1 5207839 YP_001275254.1 CDS RoseRS_0894 NC_009523.1 1109969 1110814 D hypothetical protein 1109969..1110814 Roseiflexus sp. RS-1 5207840 YP_001275255.1 CDS RoseRS_0896 NC_009523.1 1111474 1111719 R PFAM: protein of unknown function DUF433; hypothetical protein complement(1111474..1111719) Roseiflexus sp. RS-1 5207842 YP_001275256.1 CDS RoseRS_0897 NC_009523.1 1111934 1112140 R hypothetical protein complement(1111934..1112140) Roseiflexus sp. RS-1 5207843 YP_001275257.1 CDS RoseRS_0898 NC_009523.1 1112137 1112442 R hypothetical protein complement(1112137..1112442) Roseiflexus sp. RS-1 5207844 YP_001275258.1 CDS RoseRS_0899 NC_009523.1 1112592 1112942 R PFAM: protein of unknown function DUF86; hypothetical protein complement(1112592..1112942) Roseiflexus sp. RS-1 5207845 YP_001275259.1 CDS RoseRS_0900 NC_009523.1 1112923 1113234 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(1112923..1113234) Roseiflexus sp. RS-1 5207846 YP_001275260.1 CDS RoseRS_0901 NC_009523.1 1113479 1113736 R hypothetical protein complement(1113479..1113736) Roseiflexus sp. RS-1 5207847 YP_001275261.1 CDS RoseRS_0902 NC_009523.1 1115205 1115744 R hypothetical protein complement(1115205..1115744) Roseiflexus sp. RS-1 5207848 YP_001275262.1 CDS RoseRS_0903 NC_009523.1 1116325 1116615 R hypothetical protein complement(1116325..1116615) Roseiflexus sp. RS-1 5207849 YP_001275263.1 CDS RoseRS_0904 NC_009523.1 1116809 1117564 R PFAM: protein of unknown function DUF323; hypothetical protein complement(1116809..1117564) Roseiflexus sp. RS-1 5207850 YP_001275264.1 CDS RoseRS_0905 NC_009523.1 1117623 1120691 R PFAM: SMC domain protein; SMC domain-containing protein complement(1117623..1120691) Roseiflexus sp. RS-1 5207851 YP_001275265.1 CDS RoseRS_0906 NC_009523.1 1120771 1121931 R biotin carboxylase-like protein complement(1120771..1121931) Roseiflexus sp. RS-1 5207852 YP_001275266.1 CDS RoseRS_0907 NC_009523.1 1122166 1123416 R PFAM: glycosyl transferase, family 28; sterol 3-beta-glucosyltransferase complement(1122166..1123416) Roseiflexus sp. RS-1 5207853 YP_001275267.1 CDS RoseRS_0908 NC_009523.1 1123426 1123713 R PFAM: Fe(II) trafficking protein YggX; hypothetical protein complement(1123426..1123713) Roseiflexus sp. RS-1 5207854 YP_001275268.1 CDS RoseRS_0909 NC_009523.1 1123841 1124932 D PFAM: alanine dehydrogenase/PNT domain protein; NAD(P) transhydrogenase subunit alpha 1123841..1124932 Roseiflexus sp. RS-1 5207855 YP_001275269.1 CDS RoseRS_0910 NC_009523.1 1124954 1125193 D hypothetical protein 1124954..1125193 Roseiflexus sp. RS-1 5207856 YP_001275270.1 CDS RoseRS_0911 NC_009523.1 1125178 1126473 D PFAM: acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 1125178..1126473 Roseiflexus sp. RS-1 5207857 YP_001275271.1 CDS RoseRS_0912 NC_009523.1 1126477 1127430 R PFAM: UspA domain protein; UspA domain-containing protein complement(1126477..1127430) Roseiflexus sp. RS-1 5207858 YP_001275272.1 CDS RoseRS_0913 NC_009523.1 1127656 1128072 D PFAM: UspA domain protein; UspA domain-containing protein 1127656..1128072 Roseiflexus sp. RS-1 5207859 YP_001275273.1 CDS RoseRS_0914 NC_009523.1 1128123 1129016 D PFAM: UspA domain protein; UspA domain-containing protein 1128123..1129016 Roseiflexus sp. RS-1 5207860 YP_001275274.1 CDS RoseRS_0915 NC_009523.1 1129006 1129719 R phosphoribosyltransferase-like protein complement(1129006..1129719) Roseiflexus sp. RS-1 5207861 YP_001275275.1 CDS RoseRS_0916 NC_009523.1 1129740 1130417 R PFAM: CBS domain containing protein; hypothetical protein complement(1129740..1130417) Roseiflexus sp. RS-1 5207862 YP_001275276.1 CDS RoseRS_0917 NC_009523.1 1130728 1131216 D PFAM: CBS domain containing protein; hypothetical protein 1130728..1131216 Roseiflexus sp. RS-1 5207863 YP_001275277.1 CDS RoseRS_0918 NC_009523.1 1131378 1132286 D PFAM: protein of unknown function DUF820; hypothetical protein 1131378..1132286 Roseiflexus sp. RS-1 5207864 YP_001275278.1 CDS RoseRS_0919 NC_009523.1 1132744 1133934 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(1132744..1133934) Roseiflexus sp. RS-1 5207865 YP_001275279.1 CDS RoseRS_0920 NC_009523.1 1133939 1137484 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; HAD superfamily ATPase complement(1133939..1137484) Roseiflexus sp. RS-1 5207866 YP_001275280.1 CDS RoseRS_0921 NC_009523.1 1137533 1138009 R hypothetical protein complement(1137533..1138009) Roseiflexus sp. RS-1 5207867 YP_001275281.1 CDS RoseRS_0922 NC_009523.1 1138024 1138284 R hypothetical protein complement(1138024..1138284) Roseiflexus sp. RS-1 5207868 YP_001275282.1 CDS RoseRS_0923 NC_009523.1 1138370 1138930 R hypothetical protein complement(1138370..1138930) Roseiflexus sp. RS-1 5207869 YP_001275283.1 CDS RoseRS_0924 NC_009523.1 1139260 1140453 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; GntR family transcriptional regulator 1139260..1140453 Roseiflexus sp. RS-1 5207870 YP_001275284.1 CDS RoseRS_0925 NC_009523.1 1141137 1142099 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(1141137..1142099) Roseiflexus sp. RS-1 5207871 YP_001275285.1 CDS RoseRS_0926 NC_009523.1 1142725 1144386 D PFAM: thymidylate synthase complementing protein ThyX; thymidylate synthase complementing protein ThyX 1142725..1144386 Roseiflexus sp. RS-1 5207872 YP_001275286.1 CDS RoseRS_0927 NC_009523.1 1144386 1146773 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 1144386..1146773 Roseiflexus sp. RS-1 5207873 YP_001275287.1 CDS RoseRS_0928 NC_009523.1 1146925 1148115 D TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 1146925..1148115 Roseiflexus sp. RS-1 5207874 YP_001275288.1 CDS RoseRS_0929 NC_009523.1 1148213 1148530 D PFAM: protein of unknown function DUF59; hypothetical protein 1148213..1148530 Roseiflexus sp. RS-1 5207875 YP_001275289.1 CDS RoseRS_0930 NC_009523.1 1148731 1149129 D PFAM: PilT protein domain protein; PilT domain-containing protein 1148731..1149129 Roseiflexus sp. RS-1 5207876 YP_001275290.1 CDS RoseRS_0931 NC_009523.1 1149714 1150460 D PFAM: electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 1149714..1150460 Roseiflexus sp. RS-1 5207877 YP_001275291.1 CDS RoseRS_0932 NC_009523.1 1150523 1150693 D hypothetical protein 1150523..1150693 Roseiflexus sp. RS-1 5207878 YP_001275292.1 CDS RoseRS_0933 NC_009523.1 1150690 1151196 D PFAM: blue (type 1) copper domain protein; cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 1150690..1151196 Roseiflexus sp. RS-1 5207879 YP_001275293.1 CDS RoseRS_0934 NC_009523.1 1151253 1152938 D PFAM: cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 1151253..1152938 Roseiflexus sp. RS-1 5207880 YP_001275294.1 CDS RoseRS_0935 NC_009523.1 1153070 1155346 D PFAM: peptidase domain protein; peptidase domain-containing protein 1153070..1155346 Roseiflexus sp. RS-1 5207881 YP_001275295.1 CDS RoseRS_0936 NC_009523.1 1155447 1155806 D PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1155447..1155806 Roseiflexus sp. RS-1 5207882 YP_001275296.1 CDS RoseRS_0937 NC_009523.1 1155799 1157559 D PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein 1155799..1157559 Roseiflexus sp. RS-1 5207883 YP_001275297.1 CDS RoseRS_0938 NC_009523.1 1157619 1158347 R PFAM: regulatory protein, LuxR; response regulator receiver; Helix-turn-helix, type 11 domain protein; two component LuxR family transcriptional regulator complement(1157619..1158347) Roseiflexus sp. RS-1 5207884 YP_001275298.1 CDS RoseRS_0939 NC_009523.1 1158362 1159453 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; histidine kinase complement(1158362..1159453) Roseiflexus sp. RS-1 5207885 YP_001275299.1 CDS RoseRS_0940 NC_009523.1 1159787 1160386 D TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase, 4VR; bacteriochlorophyll 4-vinyl reductase 1159787..1160386 Roseiflexus sp. RS-1 5207886 YP_001275300.1 CDS RoseRS_0941 NC_009523.1 1160471 1161574 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1160471..1161574 Roseiflexus sp. RS-1 5207887 YP_001275301.1 CDS RoseRS_0942 NC_009523.1 1161645 1163231 D TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 1161645..1163231 Roseiflexus sp. RS-1 5207888 YP_001275302.1 CDS RoseRS_0943 NC_009523.1 1163302 1164789 D TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; FAD dependent oxidoreductase; phytoene dehydrogenase-like protein 1163302..1164789 Roseiflexus sp. RS-1 5207889 YP_001275303.1 CDS RoseRS_0944 NC_009523.1 1164868 1165701 D Zn-dependent hydrolase 1164868..1165701 Roseiflexus sp. RS-1 5207890 YP_001275304.1 CDS RoseRS_0945 NC_009523.1 1165815 1166681 R PFAM: intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase complement(1165815..1166681) Roseiflexus sp. RS-1 5207891 YP_001275305.1 CDS RoseRS_0946 NC_009523.1 1166912 1167883 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 1166912..1167883 Roseiflexus sp. RS-1 5207892 YP_001275306.1 CDS RoseRS_0947 NC_009523.1 1167985 1170144 R PFAM: CHAD domain containing protein; adenylate cyclase; CHAD domain-containing protein complement(1167985..1170144) Roseiflexus sp. RS-1 5207893 YP_001275307.1 CDS rpsO NC_009523.1 1170318 1170587 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1170318..1170587 Roseiflexus sp. RS-1 5207894 YP_001275308.1 CDS RoseRS_0949 NC_009523.1 1170885 1173128 D PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 2 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 1170885..1173128 Roseiflexus sp. RS-1 5207895 YP_001275309.1 CDS RoseRS_0950 NC_009523.1 1173245 1174459 D PFAM: Arsenical pump membrane protein; Citrate transporter; citrate transporter 1173245..1174459 Roseiflexus sp. RS-1 5207896 YP_001275310.1 CDS RoseRS_0951 NC_009523.1 1174522 1175217 R PFAM: Abortive infection protein; abortive infection protein complement(1174522..1175217) Roseiflexus sp. RS-1 5207897 YP_001275311.1 CDS RoseRS_0952 NC_009523.1 1175318 1176382 R PFAM: GHMP kinase; GHMP kinase complement(1175318..1176382) Roseiflexus sp. RS-1 5207898 YP_001275312.1 CDS RoseRS_0953 NC_009523.1 1176351 1177469 R PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(1176351..1177469) Roseiflexus sp. RS-1 5207899 YP_001275313.1 CDS RoseRS_0954 NC_009523.1 1177634 1179355 R PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; thiamine pyrophosphate binding domain-containing protein complement(1177634..1179355) Roseiflexus sp. RS-1 5207900 YP_001275314.1 CDS RoseRS_0955 NC_009523.1 1179488 1179808 D hypothetical protein 1179488..1179808 Roseiflexus sp. RS-1 5207901 YP_001275315.1 CDS RoseRS_0956 NC_009523.1 1180173 1181018 D PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 1180173..1181018 Roseiflexus sp. RS-1 5207902 YP_001275316.1 CDS RoseRS_0957 NC_009523.1 1181015 1182043 D PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 1181015..1182043 Roseiflexus sp. RS-1 5207903 YP_001275317.1 CDS RoseRS_0958 NC_009523.1 1182024 1183337 D PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; electron-transferring-flavoprotein dehydrogenase 1182024..1183337 Roseiflexus sp. RS-1 5207904 YP_001275318.1 CDS RoseRS_0959 NC_009523.1 1183340 1183672 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1183340..1183672 Roseiflexus sp. RS-1 5207905 YP_001275319.1 CDS RoseRS_0960 NC_009523.1 1183817 1184593 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase complement(1183817..1184593) Roseiflexus sp. RS-1 5207906 YP_001275320.1 CDS RoseRS_0961 NC_009523.1 1184621 1185259 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1184621..1185259 Roseiflexus sp. RS-1 5207907 YP_001275321.1 CDS RoseRS_0962 NC_009523.1 1185311 1186072 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase complement(1185311..1186072) Roseiflexus sp. RS-1 5207908 YP_001275322.1 CDS RoseRS_0963 NC_009523.1 1186077 1186721 R hypothetical protein complement(1186077..1186721) Roseiflexus sp. RS-1 5207909 YP_001275323.1 CDS RoseRS_0964 NC_009523.1 1186819 1188168 R PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(1186819..1188168) Roseiflexus sp. RS-1 5207910 YP_001275324.1 CDS RoseRS_0965 NC_009523.1 1188427 1189374 D TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 1188427..1189374 Roseiflexus sp. RS-1 5207911 YP_001275325.1 CDS RoseRS_0966 NC_009523.1 1189387 1190223 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 1189387..1190223 Roseiflexus sp. RS-1 5207912 YP_001275326.1 CDS RoseRS_0967 NC_009523.1 1190438 1190809 D TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; hydrogenase nickel incorporation protein HypA 1190438..1190809 Roseiflexus sp. RS-1 5207913 YP_001275327.1 CDS RoseRS_0968 NC_009523.1 1190908 1192167 D hypothetical protein 1190908..1192167 Roseiflexus sp. RS-1 5207914 YP_001275328.1 CDS RoseRS_0969 NC_009523.1 1193237 1193848 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1193237..1193848 Roseiflexus sp. RS-1 5207915 YP_001275329.1 CDS RoseRS_0970 NC_009523.1 1193829 1195142 D PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 6,7-dimethyl-8-ribityllumazine synthase; riboflavin synthase 1193829..1195142 Roseiflexus sp. RS-1 5207916 YP_001275330.1 CDS RoseRS_0971 NC_009523.1 1195551 1195976 D hypothetical protein 1195551..1195976 Roseiflexus sp. RS-1 5207917 YP_001275331.1 CDS RoseRS_0972 NC_009523.1 1195954 1196661 D TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; hydrogenase nickel incorporation protein HypB 1195954..1196661 Roseiflexus sp. RS-1 5207918 YP_001275332.1 CDS RoseRS_0973 NC_009523.1 1197000 1197269 D TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 1197000..1197269 Roseiflexus sp. RS-1 5207919 YP_001275333.1 CDS RoseRS_0974 NC_009523.1 1197266 1198381 D TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 1197266..1198381 Roseiflexus sp. RS-1 5207920 YP_001275334.1 CDS RoseRS_0975 NC_009523.1 1198378 1199436 D TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; hydrogenase expression/formation protein HypE 1198378..1199436 Roseiflexus sp. RS-1 5207921 YP_001275335.1 CDS RoseRS_0976 NC_009523.1 1199446 1201152 R hypothetical protein complement(1199446..1201152) Roseiflexus sp. RS-1 5207922 YP_001275336.1 CDS RoseRS_0977 NC_009523.1 1201149 1201808 R hypothetical protein complement(1201149..1201808) Roseiflexus sp. RS-1 5207923 YP_001275337.1 CDS RoseRS_0978 NC_009523.1 1202109 1203362 R hypothetical protein complement(1202109..1203362) Roseiflexus sp. RS-1 5207924 YP_001275338.1 CDS RoseRS_0979 NC_009523.1 1203683 1204771 D PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 1203683..1204771 Roseiflexus sp. RS-1 5207925 YP_001275339.1 CDS RoseRS_0980 NC_009523.1 1204772 1205374 R PFAM: protein of unknown function DUF820; hypothetical protein complement(1204772..1205374) Roseiflexus sp. RS-1 5207926 YP_001275340.1 CDS RoseRS_0981 NC_009523.1 1205435 1206028 R PFAM: protein of unknown function DUF820; hypothetical protein complement(1205435..1206028) Roseiflexus sp. RS-1 5207927 YP_001275341.1 CDS RoseRS_0982 NC_009523.1 1206146 1207081 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC complement(1206146..1207081) Roseiflexus sp. RS-1 5207928 YP_001275342.1 CDS RoseRS_0983 NC_009523.1 1207094 1208002 R PFAM: sec-independent translocation protein mttA/Hcf106; sec-independent translocation protein mttA/Hcf106 complement(1207094..1208002) Roseiflexus sp. RS-1 5207929 YP_001275343.1 CDS acpP NC_009523.1 1208133 1208381 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(1208133..1208381) Roseiflexus sp. RS-1 5207930 YP_001275344.1 CDS RoseRS_0985 NC_009523.1 1208435 1208863 R TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor complement(1208435..1208863) Roseiflexus sp. RS-1 5207931 YP_001275345.1 CDS RoseRS_0986 NC_009523.1 1208856 1209206 R PFAM: protein of unknown function DUF322; hypothetical protein complement(1208856..1209206) Roseiflexus sp. RS-1 5207932 YP_001275346.1 CDS RoseRS_0987 NC_009523.1 1209283 1210035 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR; 3-oxoacyl-(acyl-carrier-protein) reductase complement(1209283..1210035) Roseiflexus sp. RS-1 5207933 YP_001275347.1 CDS RoseRS_0988 NC_009523.1 1210058 1210951 R PFAM: restriction endonuclease; restriction endonuclease complement(1210058..1210951) Roseiflexus sp. RS-1 5207934 YP_001275348.1 CDS nrdR NC_009523.1 1210966 1211424 R PFAM: ATP-cone domain protein; transcriptional regulator NrdR complement(1210966..1211424) Roseiflexus sp. RS-1 5207935 YP_001275349.1 CDS RoseRS_0990 NC_009523.1 1211638 1213473 D PFAM: zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein 1211638..1213473 Roseiflexus sp. RS-1 5207936 YP_001275350.1 CDS RoseRS_0991 NC_009523.1 1213856 1216600 R PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, sugar binding; glycoside hydrolase family protein complement(1213856..1216600) Roseiflexus sp. RS-1 5207937 YP_001275351.1 CDS RoseRS_0992 NC_009523.1 1217144 1217803 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 1217144..1217803 Roseiflexus sp. RS-1 5207938 YP_001275352.1 CDS RoseRS_0993 NC_009523.1 1217815 1219221 R PFAM: MCP methyltransferase, CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; protein-glutamate O-methyltransferase complement(1217815..1219221) Roseiflexus sp. RS-1 5207939 YP_001275353.1 CDS RoseRS_0994 NC_009523.1 1219218 1220258 R PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase complement(1219218..1220258) Roseiflexus sp. RS-1 5207940 YP_001275354.1 CDS RoseRS_0995 NC_009523.1 1220255 1220695 R PFAM: CheW domain protein; putative CheW protein complement(1220255..1220695) Roseiflexus sp. RS-1 5207941 YP_001275355.1 CDS RoseRS_0996 NC_009523.1 1220710 1221084 R putative anti-sigma regulatory factor complement(1220710..1221084) Roseiflexus sp. RS-1 5207942 YP_001275356.1 CDS RoseRS_0997 NC_009523.1 1221093 1221473 R PFAM: response regulator receiver; response regulator receiver protein complement(1221093..1221473) Roseiflexus sp. RS-1 5207943 YP_001275357.1 CDS RoseRS_0998 NC_009523.1 1221486 1223837 R PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; CheA signal transduction histidine kinase complement(1221486..1223837) Roseiflexus sp. RS-1 5207944 YP_001275358.1 CDS RoseRS_0999 NC_009523.1 1223855 1225732 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1223855..1225732) Roseiflexus sp. RS-1 5207945 YP_001275359.1 CDS RoseRS_1000 NC_009523.1 1225776 1226324 R PFAM: CheW domain protein; putative CheW protein complement(1225776..1226324) Roseiflexus sp. RS-1 5207946 YP_001275360.1 CDS RoseRS_1001 NC_009523.1 1226459 1227112 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(1226459..1227112) Roseiflexus sp. RS-1 5207947 YP_001275361.1 CDS RoseRS_1002 NC_009523.1 1227277 1229433 R TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; hypothetical protein complement(1227277..1229433) Roseiflexus sp. RS-1 5207948 YP_001275362.1 CDS RoseRS_1003 NC_009523.1 1229467 1230372 R TIGRFAM: sortase family protein; PFAM: peptidase C60, sortase A and B; sortase family protein complement(1229467..1230372) Roseiflexus sp. RS-1 5207949 YP_001275363.1 CDS RoseRS_1004 NC_009523.1 1230561 1231436 D hypothetical protein 1230561..1231436 Roseiflexus sp. RS-1 5207950 YP_001275364.1 CDS RoseRS_1005 NC_009523.1 1231446 1231766 R hypothetical protein complement(1231446..1231766) Roseiflexus sp. RS-1 5207951 YP_001275365.1 CDS RoseRS_1006 NC_009523.1 1231944 1232723 D TIGRFAM: thioredoxin; PFAM: glutaredoxin 2; Thioredoxin domain; thioredoxin 1231944..1232723 Roseiflexus sp. RS-1 5207952 YP_001275366.1 CDS RoseRS_1007 NC_009523.1 1232784 1234349 R PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1232784..1234349) Roseiflexus sp. RS-1 5207953 YP_001275367.1 CDS rpmG NC_009523.1 1234529 1234693 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1234529..1234693 Roseiflexus sp. RS-1 5207954 YP_001275368.1 CDS RoseRS_1009 NC_009523.1 1234960 1236516 D hypothetical protein 1234960..1236516 Roseiflexus sp. RS-1 5207955 YP_001275369.1 CDS RoseRS_1010 NC_009523.1 1236513 1237403 D PFAM: HhH-GPD family protein; HhH-GPD family protein 1236513..1237403 Roseiflexus sp. RS-1 5207956 YP_001275370.1 CDS RoseRS_1011 NC_009523.1 1237336 1238085 R hypothetical protein complement(1237336..1238085) Roseiflexus sp. RS-1 5207957 YP_001275371.1 CDS RoseRS_1012 NC_009523.1 1238552 1239079 R PFAM: Phosphoglycerate mutase; phosphoglycerate mutase complement(1238552..1239079) Roseiflexus sp. RS-1 5207958 YP_001275372.1 CDS RoseRS_1013 NC_009523.1 1239164 1241512 D hypothetical protein 1239164..1241512 Roseiflexus sp. RS-1 5207959 YP_001275373.1 CDS RoseRS_1014 NC_009523.1 1241858 1242502 R PFAM: ribonuclease H; ribonuclease H complement(1241858..1242502) Roseiflexus sp. RS-1 5207960 YP_001275374.1 CDS RoseRS_1015 NC_009523.1 1242622 1246272 D PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; SARP family transcriptional regulator 1242622..1246272 Roseiflexus sp. RS-1 5207961 YP_001275375.1 CDS RoseRS_1016 NC_009523.1 1246786 1250583 D PFAM: Thrombospondin type 3 repeat; SMART: LamG domain protein jellyroll fold domain protein; thrombospondin type 3 repeat-containing protein 1246786..1250583 Roseiflexus sp. RS-1 5207962 YP_001275376.1 CDS RoseRS_1017 NC_009523.1 1250715 1250843 D hypothetical protein 1250715..1250843 Roseiflexus sp. RS-1 5207963 YP_001275377.1 CDS RoseRS_1018 NC_009523.1 1250952 1251467 D hypothetical protein 1250952..1251467 Roseiflexus sp. RS-1 5207964 YP_001275378.1 CDS RoseRS_1019 NC_009523.1 1252103 1254082 R hypothetical protein complement(1252103..1254082) Roseiflexus sp. RS-1 5207965 YP_001275379.1 CDS RoseRS_1020 NC_009523.1 1254083 1255780 R hypothetical protein complement(1254083..1255780) Roseiflexus sp. RS-1 5207966 YP_001275380.1 CDS RoseRS_1021 NC_009523.1 1255944 1257368 R hypothetical protein complement(1255944..1257368) Roseiflexus sp. RS-1 5207967 YP_001275381.1 CDS RoseRS_1022 NC_009523.1 1258611 1259111 D hypothetical protein 1258611..1259111 Roseiflexus sp. RS-1 5207968 YP_001275382.1 CDS RoseRS_1023 NC_009523.1 1259108 1260241 D hypothetical protein 1259108..1260241 Roseiflexus sp. RS-1 5207969 YP_001275383.1 CDS RoseRS_1024 NC_009523.1 1260297 1262303 D PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase 1260297..1262303 Roseiflexus sp. RS-1 5207970 YP_001275384.1 CDS RoseRS_1025 NC_009523.1 1262305 1264614 D hypothetical protein 1262305..1264614 Roseiflexus sp. RS-1 5207971 YP_001275385.1 CDS RoseRS_1026 NC_009523.1 1264633 1265664 R hypothetical protein complement(1264633..1265664) Roseiflexus sp. RS-1 5207972 YP_001275386.1 CDS RoseRS_1027 NC_009523.1 1266000 1266848 R hypothetical protein complement(1266000..1266848) Roseiflexus sp. RS-1 5207973 YP_001275387.1 CDS RoseRS_1028 NC_009523.1 1266845 1267501 R PFAM: TENA/THI-4 domain protein; TenA family transcription regulator complement(1266845..1267501) Roseiflexus sp. RS-1 5207974 YP_001275388.1 CDS RoseRS_1029 NC_009523.1 1267800 1268594 R hypothetical protein complement(1267800..1268594) Roseiflexus sp. RS-1 5207975 YP_001275389.1 CDS RoseRS_1030 NC_009523.1 1268664 1269458 R hypothetical protein complement(1268664..1269458) Roseiflexus sp. RS-1 5207976 YP_001275390.1 CDS RoseRS_1031 NC_009523.1 1269528 1270316 R hypothetical protein complement(1269528..1270316) Roseiflexus sp. RS-1 5207977 YP_001275391.1 CDS RoseRS_1032 NC_009523.1 1270784 1271500 D TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; translation initiation factor IF-3 1270784..1271500 Roseiflexus sp. RS-1 5207978 YP_001275392.1 CDS RoseRS_1033 NC_009523.1 1271505 1271717 D PFAM: ribosomal protein L35; 50S ribosomal protein L35 1271505..1271717 Roseiflexus sp. RS-1 5207979 YP_001275393.1 CDS rplT NC_009523.1 1271753 1272106 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1271753..1272106 Roseiflexus sp. RS-1 5207980 YP_001275394.1 CDS RoseRS_1035 NC_009523.1 1272103 1272891 D PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; tRNA/rRNA methyltransferase SpoU 1272103..1272891 Roseiflexus sp. RS-1 5207981 YP_001275395.1 CDS pheS NC_009523.1 1273193 1274236 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1273193..1274236 Roseiflexus sp. RS-1 5207982 YP_001275396.1 CDS RoseRS_1037 NC_009523.1 1274236 1276044 D hypothetical protein 1274236..1276044 Roseiflexus sp. RS-1 5207983 YP_001275397.1 CDS pheT NC_009523.1 1276054 1278561 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1276054..1278561 Roseiflexus sp. RS-1 5207984 YP_001275398.1 CDS RoseRS_1039 NC_009523.1 1278756 1279190 D hypothetical protein 1278756..1279190 Roseiflexus sp. RS-1 5207985 YP_001275399.1 CDS RoseRS_1040 NC_009523.1 1279209 1279517 D hypothetical protein 1279209..1279517 Roseiflexus sp. RS-1 5207986 YP_001275400.1 CDS RoseRS_1041 NC_009523.1 1279994 1280956 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(1279994..1280956) Roseiflexus sp. RS-1 5207987 YP_001275401.1 CDS RoseRS_1042 NC_009523.1 1281782 1282687 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(1281782..1282687) Roseiflexus sp. RS-1 5207988 YP_001275402.1 CDS RoseRS_1043 NC_009523.1 1282830 1283552 R TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B complement(1282830..1283552) Roseiflexus sp. RS-1 5207989 YP_001275403.1 CDS RoseRS_1044 NC_009523.1 1283599 1284006 R hypothetical protein complement(1283599..1284006) Roseiflexus sp. RS-1 5207990 YP_001275404.1 CDS RoseRS_1045 NC_009523.1 1284000 1284416 R TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-acyl-carrier-protein synthase complement(1284000..1284416) Roseiflexus sp. RS-1 5207991 YP_001275405.1 CDS RoseRS_1046 NC_009523.1 1284413 1285840 R hypothetical protein complement(1284413..1285840) Roseiflexus sp. RS-1 5207992 YP_001275406.1 CDS RoseRS_1047 NC_009523.1 1285877 1287211 R TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase, type I complement(1285877..1287211) Roseiflexus sp. RS-1 5207993 YP_001275407.1 CDS RoseRS_1048 NC_009523.1 1287208 1287645 R hypothetical protein complement(1287208..1287645) Roseiflexus sp. RS-1 5207994 YP_001275408.1 CDS RoseRS_1049 NC_009523.1 1287649 1287846 R hypothetical protein complement(1287649..1287846) Roseiflexus sp. RS-1 5207995 YP_001275409.1 CDS RoseRS_1050 NC_009523.1 1287863 1288843 R TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY complement(1287863..1288843) Roseiflexus sp. RS-1 5207996 YP_001275410.1 CDS RoseRS_1051 NC_009523.1 1289084 1289446 D hypothetical protein 1289084..1289446 Roseiflexus sp. RS-1 5207997 YP_001275411.1 CDS RoseRS_1052 NC_009523.1 1290422 1290979 R TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase complement(1290422..1290979) Roseiflexus sp. RS-1 5207998 YP_001275412.1 CDS RoseRS_1053 NC_009523.1 1291295 1292560 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 1291295..1292560 Roseiflexus sp. RS-1 5207999 YP_001275413.1 CDS RoseRS_1054 NC_009523.1 1292557 1293219 D PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA 1292557..1293219 Roseiflexus sp. RS-1 5208000 YP_001275414.1 CDS RoseRS_1055 NC_009523.1 1293233 1294375 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; cystathionine gamma-synthase 1293233..1294375 Roseiflexus sp. RS-1 5208001 YP_001275415.1 CDS RoseRS_1056 NC_009523.1 1294916 1295416 D catalyzes the formation of homoisocitrate from cis-homoaconitate; homoaconitate hydratase small subunit 1294916..1295416 Roseiflexus sp. RS-1 5208002 YP_001275416.1 CDS RoseRS_1057 NC_009523.1 1295413 1296501 D PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1295413..1296501 Roseiflexus sp. RS-1 5208003 YP_001275417.1 CDS RoseRS_1058 NC_009523.1 1296518 1296685 D TIGRFAM: lysine biosynthesis protein LysW; lysine biosynthesis protein LysW 1296518..1296685 Roseiflexus sp. RS-1 5208004 YP_001275418.1 CDS RoseRS_1059 NC_009523.1 1296689 1297537 D TIGRFAM: alpha-L-glutamate ligase, RimK family; lysine biosynthesis enzyme LysX; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; protein of unknown function DUF201; RimK domain protein ATP-grasp; lysine biosynthesis protein LysX 1296689..1297537 Roseiflexus sp. RS-1 5208005 YP_001275419.1 CDS RoseRS_1060 NC_009523.1 1297555 1298601 D TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 1297555..1298601 Roseiflexus sp. RS-1 5208006 YP_001275420.1 CDS RoseRS_1061 NC_009523.1 1299275 1300786 D PFAM: pyruvate carboxyltransferase; pyruvate carboxyltransferase 1299275..1300786 Roseiflexus sp. RS-1 5208007 YP_001275421.1 CDS RoseRS_1062 NC_009523.1 1300783 1301586 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate and N-acetyl-L-aminoadipate to form N-acetyl-L-aminoadipate 5-phosphate in arginine and lysine biosynthesis; acetylglutamate/acetylaminoadipate kinase 1300783..1301586 Roseiflexus sp. RS-1 5208008 YP_001275422.1 CDS RoseRS_1063 NC_009523.1 1301583 1302806 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 1301583..1302806 Roseiflexus sp. RS-1 5208009 YP_001275423.1 CDS RoseRS_1064 NC_009523.1 1304916 1307588 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1304916..1307588 Roseiflexus sp. RS-1 5208010 YP_001275424.1 CDS RoseRS_1065 NC_009523.1 1307769 1309013 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1307769..1309013) Roseiflexus sp. RS-1 5208011 YP_001275425.1 CDS RoseRS_1066 NC_009523.1 1309333 1310508 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 1309333..1310508 Roseiflexus sp. RS-1 5208012 YP_001275426.1 CDS RoseRS_1067 NC_009523.1 1310672 1311094 D hypothetical protein 1310672..1311094 Roseiflexus sp. RS-1 5208013 YP_001275427.1 CDS RoseRS_1068 NC_009523.1 1311535 1327035 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Cna B domain protein; hypothetical protein 1311535..1327035 Roseiflexus sp. RS-1 5208014 YP_001275428.1 CDS RoseRS_1069 NC_009523.1 1327145 1327924 R PFAM: protein of unknown function DUF820; hypothetical protein complement(1327145..1327924) Roseiflexus sp. RS-1 5208015 YP_001275429.1 CDS RoseRS_1070 NC_009523.1 1328314 1329003 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1328314..1329003 Roseiflexus sp. RS-1 5208016 YP_001275430.1 CDS RoseRS_1071 NC_009523.1 1329047 1330384 D Na+/melibiose symporter and related transporter-like protein 1329047..1330384 Roseiflexus sp. RS-1 5208017 YP_001275431.1 CDS RoseRS_1072 NC_009523.1 1330381 1331805 D PFAM: aminotransferase, class V; Pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 1330381..1331805 Roseiflexus sp. RS-1 5208018 YP_001275432.1 CDS RoseRS_1073 NC_009523.1 1331846 1334389 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KR; thiamine pyrophosphate enzyme, central region 1331846..1334389 Roseiflexus sp. RS-1 5208019 YP_001275433.1 CDS RoseRS_1074 NC_009523.1 1334401 1335825 D PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M20 1334401..1335825 Roseiflexus sp. RS-1 5208020 YP_001275434.1 CDS RoseRS_1075 NC_009523.1 1335829 1338315 R PFAM: protein of unknown function DUF214; hypothetical protein complement(1335829..1338315) Roseiflexus sp. RS-1 5208021 YP_001275435.1 CDS RoseRS_1076 NC_009523.1 1338430 1338726 D PFAM: chaperonin Cpn10; chaperonin Cpn10 1338430..1338726 Roseiflexus sp. RS-1 5208022 YP_001275436.1 CDS RoseRS_1077 NC_009523.1 1338730 1340370 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; chaperonin GroEL 1338730..1340370 Roseiflexus sp. RS-1 5208023 YP_001275437.1 CDS RoseRS_1079 NC_009523.1 1343334 1343633 R hypothetical protein complement(1343334..1343633) Roseiflexus sp. RS-1 5208026 YP_001275438.1 CDS RoseRS_1080 NC_009523.1 1343643 1345241 R PFAM: protein of unknown function DUF344; hypothetical protein complement(1343643..1345241) Roseiflexus sp. RS-1 5208027 YP_001275439.1 CDS RoseRS_1081 NC_009523.1 1345244 1346758 R TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; glycogen/starch synthase complement(1345244..1346758) Roseiflexus sp. RS-1 5208028 YP_001275440.1 CDS RoseRS_1082 NC_009523.1 1346779 1347855 R hypothetical protein complement(1346779..1347855) Roseiflexus sp. RS-1 5208029 YP_001275441.1 CDS RoseRS_1083 NC_009523.1 1348220 1348966 R TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase complement(1348220..1348966) Roseiflexus sp. RS-1 5208030 YP_001275442.1 CDS RoseRS_1084 NC_009523.1 1349156 1350304 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; homoserine dehydrogenase, NAD-binding; oxidoreductase domain-containing protein 1349156..1350304 Roseiflexus sp. RS-1 5208031 YP_001275443.1 CDS RoseRS_1085 NC_009523.1 1350323 1351240 D PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1350323..1351240 Roseiflexus sp. RS-1 5208032 YP_001275444.1 CDS RoseRS_1086 NC_009523.1 1351290 1351907 R PFAM: oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase complement(1351290..1351907) Roseiflexus sp. RS-1 5208033 YP_001275445.1 CDS RoseRS_1087 NC_009523.1 1351922 1352314 R hypothetical protein complement(1351922..1352314) Roseiflexus sp. RS-1 5208034 YP_001275446.1 CDS RoseRS_1088 NC_009523.1 1352668 1353462 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 1352668..1353462 Roseiflexus sp. RS-1 5208035 YP_001275447.1 CDS RoseRS_1089 NC_009523.1 1353510 1354598 R PFAM: aminotransferase, class I and II; GntR family transcriptional regulator complement(1353510..1354598) Roseiflexus sp. RS-1 5208036 YP_001275448.1 CDS RoseRS_1090 NC_009523.1 1354751 1354960 D hypothetical protein 1354751..1354960 Roseiflexus sp. RS-1 5208037 YP_001275449.1 CDS RoseRS_1091 NC_009523.1 1355063 1355884 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(1355063..1355884) Roseiflexus sp. RS-1 5208038 YP_001275450.1 CDS RoseRS_1092 NC_009523.1 1356259 1359573 R PFAM: peptidase S41; WD40 domain protein beta Propeller; peptidase S41 complement(1356259..1359573) Roseiflexus sp. RS-1 5208039 YP_001275451.1 CDS RoseRS_1093 NC_009523.1 1359985 1361874 D PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein 1359985..1361874 Roseiflexus sp. RS-1 5208040 YP_001275452.1 CDS RoseRS_1094 NC_009523.1 1361955 1362878 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1361955..1362878 Roseiflexus sp. RS-1 5208041 YP_001275453.1 CDS RoseRS_1095 NC_009523.1 1362906 1363808 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1362906..1363808 Roseiflexus sp. RS-1 5208042 YP_001275454.1 CDS RoseRS_1096 NC_009523.1 1363861 1365669 R hypothetical protein complement(1363861..1365669) Roseiflexus sp. RS-1 5208043 YP_001275455.1 CDS RoseRS_1097 NC_009523.1 1365717 1370963 R large extracellular alpha-helical protein-like protein complement(1365717..1370963) Roseiflexus sp. RS-1 5208044 YP_001275456.1 CDS RoseRS_1098 NC_009523.1 1371053 1372252 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1371053..1372252) Roseiflexus sp. RS-1 5208045 YP_001275457.1 CDS RoseRS_1099 NC_009523.1 1372348 1374966 R PFAM: glycosyl transferase, family 39; glycosyl transferase family protein complement(1372348..1374966) Roseiflexus sp. RS-1 5208046 YP_001275458.1 CDS RoseRS_1100 NC_009523.1 1375091 1376977 R PFAM: glycosyl transferase, family 39; glycosyl transferase family protein complement(1375091..1376977) Roseiflexus sp. RS-1 5208047 YP_001275459.1 CDS RoseRS_1101 NC_009523.1 1377116 1378750 R hypothetical protein complement(1377116..1378750) Roseiflexus sp. RS-1 5208048 YP_001275460.1 CDS RoseRS_1103 NC_009523.1 1379073 1379786 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(1379073..1379786) Roseiflexus sp. RS-1 5208050 YP_001275461.1 CDS RoseRS_1104 NC_009523.1 1379801 1380991 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1379801..1380991) Roseiflexus sp. RS-1 5208051 YP_001275462.1 CDS RoseRS_1105 NC_009523.1 1380988 1383087 R hypothetical protein complement(1380988..1383087) Roseiflexus sp. RS-1 5208052 YP_001275463.1 CDS RoseRS_1106 NC_009523.1 1383099 1383644 R PFAM: Dual specificity protein phosphatase; dual specificity protein phosphatase complement(1383099..1383644) Roseiflexus sp. RS-1 5208053 YP_001275464.1 CDS RoseRS_1107 NC_009523.1 1383759 1384037 D PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator 1383759..1384037 Roseiflexus sp. RS-1 5208054 YP_001275465.1 CDS RoseRS_1108 NC_009523.1 1384043 1384423 D hypothetical protein 1384043..1384423 Roseiflexus sp. RS-1 5208055 YP_001275466.1 CDS RoseRS_1109 NC_009523.1 1384431 1384943 R hypothetical protein complement(1384431..1384943) Roseiflexus sp. RS-1 5208056 YP_001275467.1 CDS RoseRS_1110 NC_009523.1 1385048 1385536 D PFAM: protein of unknown function DUF355; hypothetical protein 1385048..1385536 Roseiflexus sp. RS-1 5208057 YP_001275468.1 CDS RoseRS_1111 NC_009523.1 1385580 1387043 D TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB N-terminal region; GatB, central domain protein; glutamyl-tRNA(Gln) amidotransferase subunit B 1385580..1387043 Roseiflexus sp. RS-1 5208058 YP_001275469.1 CDS RoseRS_1112 NC_009523.1 1387117 1388346 D PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; putative esterase 1387117..1388346 Roseiflexus sp. RS-1 5208059 YP_001275470.1 CDS RoseRS_1113 NC_009523.1 1388428 1389333 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1388428..1389333 Roseiflexus sp. RS-1 5208060 YP_001275471.1 CDS RoseRS_1114 NC_009523.1 1389330 1390202 D hypothetical protein 1389330..1390202 Roseiflexus sp. RS-1 5208061 YP_001275472.1 CDS RoseRS_1115 NC_009523.1 1390218 1391066 R hypothetical protein complement(1390218..1391066) Roseiflexus sp. RS-1 5208062 YP_001275473.1 CDS RoseRS_1116 NC_009523.1 1391162 1392265 R TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; CaCA family Na(+)/Ca(+) antiporter complement(1391162..1392265) Roseiflexus sp. RS-1 5208063 YP_001275474.1 CDS RoseRS_1117 NC_009523.1 1392568 1393719 D PFAM: ATP-binding region, ATPase domain protein domain protein; putative signal transduction histidine kinase 1392568..1393719 Roseiflexus sp. RS-1 5208064 YP_001275475.1 CDS RoseRS_1118 NC_009523.1 1393722 1395476 D PFAM: penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase 1393722..1395476 Roseiflexus sp. RS-1 5208065 YP_001275476.1 CDS RoseRS_1119 NC_009523.1 1395615 1396913 D PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; peptidase S41 1395615..1396913 Roseiflexus sp. RS-1 5208066 YP_001275477.1 CDS hisB NC_009523.1 1396913 1397512 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1396913..1397512 Roseiflexus sp. RS-1 5208067 YP_001275478.1 CDS RoseRS_1121 NC_009523.1 1397509 1398534 D PFAM: luciferase family protein; luciferase family protein 1397509..1398534 Roseiflexus sp. RS-1 5208068 YP_001275479.1 CDS RoseRS_1122 NC_009523.1 1398540 1399760 D SMART: Laminin G; laminin G 1398540..1399760 Roseiflexus sp. RS-1 5208069 YP_001275480.1 CDS RoseRS_1123 NC_009523.1 1400037 1400993 D SMART: LamG domain protein jellyroll fold domain protein; LamG domain-containing protein 1400037..1400993 Roseiflexus sp. RS-1 5208070 YP_001275481.1 CDS RoseRS_1124 NC_009523.1 1400993 1402102 D SMART: LamG domain protein jellyroll fold domain protein; LamG domain-containing protein 1400993..1402102 Roseiflexus sp. RS-1 5208071 YP_001275482.1 CDS RoseRS_1125 NC_009523.1 1402316 1402639 D hypothetical protein 1402316..1402639 Roseiflexus sp. RS-1 5208072 YP_001275483.1 CDS RoseRS_1126 NC_009523.1 1402651 1403358 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 1402651..1403358 Roseiflexus sp. RS-1 5208073 YP_001275484.1 CDS RoseRS_1127 NC_009523.1 1403388 1404731 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1403388..1404731 Roseiflexus sp. RS-1 5208074 YP_001275485.1 CDS RoseRS_1128 NC_009523.1 1404765 1406252 D hypothetical protein 1404765..1406252 Roseiflexus sp. RS-1 5208075 YP_001275486.1 CDS RoseRS_1129 NC_009523.1 1406295 1407272 D PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 1406295..1407272 Roseiflexus sp. RS-1 5208076 YP_001275487.1 CDS RoseRS_1130 NC_009523.1 1407370 1408170 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1407370..1408170 Roseiflexus sp. RS-1 5208077 YP_001275488.1 CDS RoseRS_1131 NC_009523.1 1408173 1409264 D PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1408173..1409264 Roseiflexus sp. RS-1 5208078 YP_001275489.1 CDS RoseRS_1132 NC_009523.1 1409287 1409724 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 1409287..1409724 Roseiflexus sp. RS-1 5208079 YP_001275490.1 CDS RoseRS_1133 NC_009523.1 1409947 1411299 D PFAM: amine oxidase; FAD dependent oxidoreductase; hypothetical protein 1409947..1411299 Roseiflexus sp. RS-1 5208080 YP_001275491.1 CDS RoseRS_1134 NC_009523.1 1411323 1412789 D PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 1411323..1412789 Roseiflexus sp. RS-1 5208081 YP_001275492.1 CDS RoseRS_1135 NC_009523.1 1412804 1413889 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein 1412804..1413889 Roseiflexus sp. RS-1 5208082 YP_001275493.1 CDS RoseRS_1136 NC_009523.1 1419365 1420120 D TIGRFAM: F420-dependent oxidoreductase, putative; PFAM: protein of unknown function DUF129; F420-dependent oxidoreductase 1419365..1420120 Roseiflexus sp. RS-1 5208087 YP_001275494.1 CDS RoseRS_1137 NC_009523.1 1420143 1420772 D PFAM: nitroreductase; nitroreductase 1420143..1420772 Roseiflexus sp. RS-1 5208088 YP_001275495.1 CDS RoseRS_1138 NC_009523.1 1420792 1421736 D catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); LPPG:FO 2-phospho-L-lactate transferase 1420792..1421736 Roseiflexus sp. RS-1 5208089 YP_001275496.1 CDS RoseRS_1139 NC_009523.1 1421751 1422419 D PFAM: protein of unknown function DUF121; hypothetical protein 1421751..1422419 Roseiflexus sp. RS-1 5208090 YP_001275497.1 CDS RoseRS_1140 NC_009523.1 1422389 1423387 D PFAM: luciferase family protein; luciferase family protein 1422389..1423387 Roseiflexus sp. RS-1 5208091 YP_001275498.1 CDS RoseRS_1141 NC_009523.1 1423579 1423995 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1423579..1423995 Roseiflexus sp. RS-1 5208092 YP_001275499.1 CDS RoseRS_1142 NC_009523.1 1424031 1426316 R PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; xanthine dehydrogenase complement(1424031..1426316) Roseiflexus sp. RS-1 5208093 YP_001275500.1 CDS RoseRS_1143 NC_009523.1 1426331 1426624 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C complement(1426331..1426624) Roseiflexus sp. RS-1 5208094 YP_001275501.1 CDS RoseRS_1144 NC_009523.1 1426654 1428009 R PFAM: YbbR family protein; YbbR family protein complement(1426654..1428009) Roseiflexus sp. RS-1 5208095 YP_001275502.1 CDS RoseRS_1145 NC_009523.1 1428031 1428870 R PFAM: protein of unknown function DUF147; hypothetical protein complement(1428031..1428870) Roseiflexus sp. RS-1 5208096 YP_001275503.1 CDS RoseRS_1146 NC_009523.1 1429027 1432302 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(1429027..1432302) Roseiflexus sp. RS-1 5208097 YP_001275504.1 CDS RoseRS_1147 NC_009523.1 1432456 1433247 R PFAM: IstB domain protein ATP-binding protein; Chromosomal replication initiator, DnaA; SMART: AAA ATPase; IstB ATP binding domain-containing protein complement(1432456..1433247) Roseiflexus sp. RS-1 5208098 YP_001275505.1 CDS RoseRS_1148 NC_009523.1 1433174 1433893 R TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; primosome subunit DnaD complement(1433174..1433893) Roseiflexus sp. RS-1 5208099 YP_001275506.1 CDS RoseRS_1149 NC_009523.1 1433994 1435328 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase; replicative DNA helicase complement(1433994..1435328) Roseiflexus sp. RS-1 5208100 YP_001275507.1 CDS rplI NC_009523.1 1435527 1436024 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(1435527..1436024) Roseiflexus sp. RS-1 5208101 YP_001275508.1 CDS RoseRS_1151 NC_009523.1 1436275 1436934 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(1436275..1436934) Roseiflexus sp. RS-1 5208102 YP_001275509.1 CDS RoseRS_1152 NC_009523.1 1436955 1437920 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(1436955..1437920) Roseiflexus sp. RS-1 5208103 YP_001275510.1 CDS RoseRS_1153 NC_009523.1 1437962 1438735 D PFAM: inositol monophosphatase; inositol-phosphate phosphatase 1437962..1438735 Roseiflexus sp. RS-1 5208104 YP_001275511.1 CDS RoseRS_1154 NC_009523.1 1438804 1439202 R PFAM: ribosomal protein S9; 30S ribosomal protein S9 complement(1438804..1439202) Roseiflexus sp. RS-1 5208105 YP_001275512.1 CDS rplM NC_009523.1 1439224 1439664 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(1439224..1439664) Roseiflexus sp. RS-1 5208106 YP_001275513.1 CDS RoseRS_1156 NC_009523.1 1439661 1440473 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase ACD complement(1439661..1440473) Roseiflexus sp. RS-1 5208107 YP_001275514.1 CDS rplQ NC_009523.1 1440474 1440824 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(1440474..1440824) Roseiflexus sp. RS-1 5208108 YP_001275515.1 CDS RoseRS_1158 NC_009523.1 1440837 1441808 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(1440837..1441808) Roseiflexus sp. RS-1 5208109 YP_001275516.1 CDS RoseRS_1159 NC_009523.1 1441902 1442522 R PFAM: ribosomal protein S4; RNA-binding S4 domain protein; 30S ribosomal protein S4 complement(1441902..1442522) Roseiflexus sp. RS-1 5208110 YP_001275517.1 CDS RoseRS_1160 NC_009523.1 1442544 1442963 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(1442544..1442963) Roseiflexus sp. RS-1 5208111 YP_001275518.1 CDS rpsM NC_009523.1 1443041 1443424 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(1443041..1443424) Roseiflexus sp. RS-1 5208112 YP_001275519.1 CDS rpmJ NC_009523.1 1443527 1443643 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(1443527..1443643) Roseiflexus sp. RS-1 5208113 YP_001275520.1 CDS infA NC_009523.1 1443758 1443979 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(1443758..1443979) Roseiflexus sp. RS-1 5208114 YP_001275521.1 CDS RoseRS_1164 NC_009523.1 1443995 1444675 R PFAM: adenylate kinase; adenylate kinase, lid domain protein; nucleoside-triphosphate--adenylate kinase complement(1443995..1444675) Roseiflexus sp. RS-1 5208115 YP_001275522.1 CDS RoseRS_1165 NC_009523.1 1444711 1446063 R TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY complement(1444711..1446063) Roseiflexus sp. RS-1 5208116 YP_001275523.1 CDS rplO NC_009523.1 1446113 1446637 R late assembly protein; 50S ribosomal protein L15 complement(1446113..1446637) Roseiflexus sp. RS-1 5208117 YP_001275524.1 CDS rpmD NC_009523.1 1446634 1446870 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(1446634..1446870) Roseiflexus sp. RS-1 5208118 YP_001275525.1 CDS rpsE NC_009523.1 1446883 1447425 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(1446883..1447425) Roseiflexus sp. RS-1 5208119 YP_001275526.1 CDS rplR NC_009523.1 1447511 1447876 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(1447511..1447876) Roseiflexus sp. RS-1 5208120 YP_001275527.1 CDS rplF NC_009523.1 1447948 1448511 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(1447948..1448511) Roseiflexus sp. RS-1 5208121 YP_001275528.1 CDS rpsH NC_009523.1 1448529 1448921 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(1448529..1448921) Roseiflexus sp. RS-1 5208122 YP_001275529.1 CDS rpsN NC_009523.1 1448974 1449159 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(1448974..1449159) Roseiflexus sp. RS-1 5208123 YP_001275530.1 CDS rplE NC_009523.1 1449234 1449776 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(1449234..1449776) Roseiflexus sp. RS-1 5208124 YP_001275531.1 CDS rplX NC_009523.1 1449827 1450159 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(1449827..1450159) Roseiflexus sp. RS-1 5208125 YP_001275532.1 CDS rplN NC_009523.1 1450174 1450542 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(1450174..1450542) Roseiflexus sp. RS-1 5208126 YP_001275533.1 CDS rpsQ NC_009523.1 1450545 1450805 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(1450545..1450805) Roseiflexus sp. RS-1 5208127 YP_001275534.1 CDS RoseRS_1177 NC_009523.1 1450802 1451017 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(1450802..1451017) Roseiflexus sp. RS-1 5208128 YP_001275535.1 CDS rplP NC_009523.1 1451014 1451439 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(1451014..1451439) Roseiflexus sp. RS-1 5208129 YP_001275536.1 CDS RoseRS_1179 NC_009523.1 1451455 1452243 R TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3-C-terminal domain protein; KH, type 2 domain protein; Ribosomal protein S3, N-terminal domain; SMART: KH domain protein; 30S ribosomal protein S3 complement(1451455..1452243) Roseiflexus sp. RS-1 5208130 YP_001275537.1 CDS rplV NC_009523.1 1452291 1452632 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(1452291..1452632) Roseiflexus sp. RS-1 5208131 YP_001275538.1 CDS rpsS NC_009523.1 1452688 1452975 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(1452688..1452975) Roseiflexus sp. RS-1 5208132 YP_001275539.1 CDS rplB NC_009523.1 1453000 1453827 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(1453000..1453827) Roseiflexus sp. RS-1 5208133 YP_001275540.1 CDS rplW NC_009523.1 1453831 1454115 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(1453831..1454115) Roseiflexus sp. RS-1 5208134 YP_001275541.1 CDS RoseRS_1184 NC_009523.1 1454112 1454783 R PFAM: ribosomal protein L4/L1e; 50S ribosomal protein L4 complement(1454112..1454783) Roseiflexus sp. RS-1 5208135 YP_001275542.1 CDS rplC NC_009523.1 1454828 1455460 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(1454828..1455460) Roseiflexus sp. RS-1 5208136 YP_001275543.1 CDS rpsJ NC_009523.1 1455521 1455829 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(1455521..1455829) Roseiflexus sp. RS-1 5208137 YP_001275544.1 CDS RoseRS_1187 NC_009523.1 1455944 1457149 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(1455944..1457149) Roseiflexus sp. RS-1 5208138 YP_001275545.1 CDS RoseRS_1188 NC_009523.1 1457204 1459309 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(1457204..1459309) Roseiflexus sp. RS-1 5208139 YP_001275546.1 CDS RoseRS_1189 NC_009523.1 1459416 1459889 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(1459416..1459889) Roseiflexus sp. RS-1 5208140 YP_001275547.1 CDS rpsL NC_009523.1 1459946 1460380 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(1459946..1460380) Roseiflexus sp. RS-1 5208141 YP_001275548.1 CDS RoseRS_1191 NC_009523.1 1460686 1461600 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1460686..1461600 Roseiflexus sp. RS-1 5208142 YP_001275549.1 CDS RoseRS_1192 NC_009523.1 1461702 1462226 D hypothetical protein 1461702..1462226 Roseiflexus sp. RS-1 5208143 YP_001275550.1 CDS RoseRS_1193 NC_009523.1 1463239 1464084 D hypothetical protein 1463239..1464084 Roseiflexus sp. RS-1 5208145 YP_001275551.1 CDS RoseRS_1194 NC_009523.1 1464094 1464354 D hypothetical protein 1464094..1464354 Roseiflexus sp. RS-1 5208146 YP_001275552.1 CDS RoseRS_1195 NC_009523.1 1464736 1465290 R hypothetical protein complement(1464736..1465290) Roseiflexus sp. RS-1 5208147 YP_001275553.1 CDS RoseRS_1196 NC_009523.1 1466168 1466614 R PFAM: regulatory protein, LuxR; response regulator receiver protein complement(1466168..1466614) Roseiflexus sp. RS-1 5208148 YP_001275554.1 CDS RoseRS_1197 NC_009523.1 1467652 1468032 R hypothetical protein complement(1467652..1468032) Roseiflexus sp. RS-1 5208149 YP_001275555.1 CDS RoseRS_1198 NC_009523.1 1468054 1469481 R PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase complement(1468054..1469481) Roseiflexus sp. RS-1 5208150 YP_001275556.1 CDS RoseRS_1199 NC_009523.1 1469478 1470908 R TIGRFAM: nitrogenase alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase component I subunit alpha complement(1469478..1470908) Roseiflexus sp. RS-1 5208151 YP_001275557.1 CDS RoseRS_1200 NC_009523.1 1470877 1471818 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(1470877..1471818) Roseiflexus sp. RS-1 5208152 YP_001275558.1 CDS RoseRS_1201 NC_009523.1 1471846 1472667 R TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein complement(1471846..1472667) Roseiflexus sp. RS-1 5208153 YP_001275559.1 CDS RoseRS_1202 NC_009523.1 1473424 1474329 D hypothetical protein 1473424..1474329 Roseiflexus sp. RS-1 5208154 YP_001275560.1 CDS RoseRS_1203 NC_009523.1 1474342 1477248 D PFAM: protein of unknown function DUF214; hypothetical protein 1474342..1477248 Roseiflexus sp. RS-1 5208155 YP_001275561.1 CDS RoseRS_1204 NC_009523.1 1477328 1478290 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(1477328..1478290) Roseiflexus sp. RS-1 5208156 YP_001275562.1 CDS RoseRS_1205 NC_009523.1 1479280 1481934 D hypothetical protein 1479280..1481934 Roseiflexus sp. RS-1 5208157 YP_001275563.1 CDS RoseRS_1206 NC_009523.1 1482479 1483099 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 1482479..1483099 Roseiflexus sp. RS-1 5208158 YP_001275564.1 CDS RoseRS_1207 NC_009523.1 1483121 1483711 D hypothetical protein 1483121..1483711 Roseiflexus sp. RS-1 5208159 YP_001275565.1 CDS RoseRS_1208 NC_009523.1 1484099 1484884 D hypothetical protein 1484099..1484884 Roseiflexus sp. RS-1 5208160 YP_001275566.1 CDS RoseRS_1209 NC_009523.1 1484921 1485238 D hypothetical protein 1484921..1485238 Roseiflexus sp. RS-1 5208161 YP_001275567.1 CDS RoseRS_1210 NC_009523.1 1485677 1487323 R hypothetical protein complement(1485677..1487323) Roseiflexus sp. RS-1 5208162 YP_001275568.1 CDS RoseRS_1211 NC_009523.1 1487411 1488238 D PFAM: cyclase family protein; cyclase family protein 1487411..1488238 Roseiflexus sp. RS-1 5208163 YP_001275569.1 CDS RoseRS_1212 NC_009523.1 1488242 1488652 R hypothetical protein complement(1488242..1488652) Roseiflexus sp. RS-1 5208164 YP_001275570.1 CDS RoseRS_1213 NC_009523.1 1489161 1492739 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1489161..1492739 Roseiflexus sp. RS-1 5208165 YP_001275571.1 CDS RoseRS_1214 NC_009523.1 1492853 1493527 R PFAM: adenylate kinase; adenylate kinase complement(1492853..1493527) Roseiflexus sp. RS-1 5208166 YP_001275572.1 CDS RoseRS_1215 NC_009523.1 1493558 1494244 R PFAM: Translin; haloacid dehalogenase superfamily protein complement(1493558..1494244) Roseiflexus sp. RS-1 5208167 YP_001275573.1 CDS RoseRS_1216 NC_009523.1 1494462 1496255 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1494462..1496255 Roseiflexus sp. RS-1 5208168 YP_001275574.1 CDS RoseRS_1217 NC_009523.1 1496310 1497254 D PFAM: protein of unknown function DUF820; hypothetical protein 1496310..1497254 Roseiflexus sp. RS-1 5208169 YP_001275575.1 CDS RoseRS_1218 NC_009523.1 1497492 1498472 D PFAM: deoxyhypusine synthase; deoxyhypusine synthase 1497492..1498472 Roseiflexus sp. RS-1 5208170 YP_001275576.1 CDS RoseRS_1219 NC_009523.1 1499193 1499471 D hypothetical protein 1499193..1499471 Roseiflexus sp. RS-1 5208171 YP_001275577.1 CDS RoseRS_1221 NC_009523.1 1499936 1500993 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(1499936..1500463,1500463..1500993)) Roseiflexus sp. RS-1 5208173 YP_001275578.1 CDS RoseRS_1223 NC_009523.1 1502950 1503345 D PFAM: regulatory protein, ArsR; regulatory protein ArsR 1502950..1503345 Roseiflexus sp. RS-1 5208175 YP_001275579.1 CDS RoseRS_1224 NC_009523.1 1503435 1504283 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 1503435..1504283 Roseiflexus sp. RS-1 5208176 YP_001275580.1 CDS RoseRS_1225 NC_009523.1 1504350 1505648 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(1504350..1505648) Roseiflexus sp. RS-1 5208177 YP_001275581.1 CDS RoseRS_1226 NC_009523.1 1505773 1506783 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; type I glyceraldehyde-3-phosphate dehydrogenase complement(1505773..1506783) Roseiflexus sp. RS-1 5208178 YP_001275582.1 CDS RoseRS_1227 NC_009523.1 1506812 1507588 R PFAM: low molecular weight phosphotyrosine protein phosphatase; SMART: regulatory protein, ArsR; protein tyrosine phosphatase complement(1506812..1507588) Roseiflexus sp. RS-1 5208179 YP_001275583.1 CDS RoseRS_1228 NC_009523.1 1507610 1508374 R PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein, ArsR; protein tyrosine phosphatase complement(1507610..1508374) Roseiflexus sp. RS-1 5208180 YP_001275584.1 CDS RoseRS_1229 NC_009523.1 1508465 1509301 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(1508465..1509301) Roseiflexus sp. RS-1 5208181 YP_001275585.1 CDS RoseRS_1230 NC_009523.1 1509325 1510566 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1509325..1510566) Roseiflexus sp. RS-1 5208182 YP_001275586.1 CDS RoseRS_1231 NC_009523.1 1510523 1511422 R hypothetical protein complement(1510523..1511422) Roseiflexus sp. RS-1 5208183 YP_001275587.1 CDS RoseRS_1232 NC_009523.1 1511397 1511891 R PFAM: protein of unknown function DUF123; hypothetical protein complement(1511397..1511891) Roseiflexus sp. RS-1 5208184 YP_001275588.1 CDS RoseRS_1233 NC_009523.1 1511956 1513935 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1511956..1513935) Roseiflexus sp. RS-1 5208185 YP_001275589.1 CDS RoseRS_1234 NC_009523.1 1514053 1514661 D PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 1514053..1514661 Roseiflexus sp. RS-1 5208186 YP_001275590.1 CDS RoseRS_1235 NC_009523.1 1514658 1515803 D putative transmembrane anti-sigma factor 1514658..1515803 Roseiflexus sp. RS-1 5208187 YP_001275591.1 CDS RoseRS_1236 NC_009523.1 1516417 1517349 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1516417..1517349 Roseiflexus sp. RS-1 5208188 YP_001275592.1 CDS RoseRS_1237 NC_009523.1 1517711 1518619 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 1517711..1518619 Roseiflexus sp. RS-1 5208189 YP_001275593.1 CDS RoseRS_1238 NC_009523.1 1518616 1519530 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1518616..1519530 Roseiflexus sp. RS-1 5208190 YP_001275594.1 CDS RoseRS_1239 NC_009523.1 1519537 1520043 D hypothetical protein 1519537..1520043 Roseiflexus sp. RS-1 5208191 YP_001275595.1 CDS RoseRS_1240 NC_009523.1 1520206 1522812 R TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; primosomal protein N' complement(1520206..1522812) Roseiflexus sp. RS-1 5208192 YP_001275596.1 CDS RoseRS_1241 NC_009523.1 1523434 1523607 D hypothetical protein 1523434..1523607 Roseiflexus sp. RS-1 5208193 YP_001275597.1 CDS RoseRS_1242 NC_009523.1 1523611 1524153 D type II site-specific deoxyribonuclease 1523611..1524153 Roseiflexus sp. RS-1 5208194 YP_001275598.1 CDS RoseRS_1243 NC_009523.1 1524159 1525763 D hypothetical protein 1524159..1525763 Roseiflexus sp. RS-1 5208195 YP_001275599.1 CDS RoseRS_1244 NC_009523.1 1526424 1526768 D hypothetical protein 1526424..1526768 Roseiflexus sp. RS-1 5208196 YP_001275600.1 CDS RoseRS_1245 NC_009523.1 1526768 1529314 D PFAM: TPR repeat-containing protein; NB-ARC domain protein; SMART: AAA ATPase; Tetratricopeptide domain protein; NB-ARC domain-containing protein 1526768..1529314 Roseiflexus sp. RS-1 5208197 YP_001275601.1 CDS RoseRS_1246 NC_009523.1 1529345 1530718 R PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; nucleotidyl transferase complement(1529345..1530718) Roseiflexus sp. RS-1 5208198 YP_001275602.1 CDS RoseRS_1247 NC_009523.1 1530764 1531903 R PFAM: peptidase M50; peptidase M50 complement(1530764..1531903) Roseiflexus sp. RS-1 5208199 YP_001275603.1 CDS RoseRS_1248 NC_009523.1 1532404 1533396 D hypothetical protein 1532404..1533396 Roseiflexus sp. RS-1 5208200 YP_001275604.1 CDS RoseRS_1249 NC_009523.1 1533438 1533902 D hypothetical protein 1533438..1533902 Roseiflexus sp. RS-1 5208201 YP_001275605.1 CDS RoseRS_1250 NC_009523.1 1534644 1536866 D PFAM: cell surface receptor IPT/TIG domain protein; cell surface receptor IPT/TIG domain-containing protein 1534644..1536866 Roseiflexus sp. RS-1 5208202 YP_001275606.1 CDS RoseRS_1251 NC_009523.1 1537081 1538532 D PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; peptidase S41 1537081..1538532 Roseiflexus sp. RS-1 5208203 YP_001275607.1 CDS trpC NC_009523.1 1538628 1539437 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 1538628..1539437 Roseiflexus sp. RS-1 5208204 YP_001275608.1 CDS RoseRS_1253 NC_009523.1 1539434 1539952 D hypothetical protein 1539434..1539952 Roseiflexus sp. RS-1 5208205 YP_001275609.1 CDS RoseRS_1254 NC_009523.1 1539973 1541391 D PFAM: Amidase; amidase 1539973..1541391 Roseiflexus sp. RS-1 5208206 YP_001275610.1 CDS RoseRS_1255 NC_009523.1 1541491 1543293 R TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; oligoendopeptidase F complement(1541491..1543293) Roseiflexus sp. RS-1 5208207 YP_001275611.1 CDS RoseRS_1256 NC_009523.1 1543395 1544237 R PFAM: transport system permease protein; ABC-3 protein; ABC-3 protein complement(1543395..1544237) Roseiflexus sp. RS-1 5208208 YP_001275612.1 CDS RoseRS_1257 NC_009523.1 1544234 1545049 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1544234..1545049) Roseiflexus sp. RS-1 5208209 YP_001275613.1 CDS RoseRS_1258 NC_009523.1 1545046 1546530 R PFAM: periplasmic solute binding protein; periplasmic solute binding protein complement(1545046..1546530) Roseiflexus sp. RS-1 5208210 YP_001275614.1 CDS RoseRS_1259 NC_009523.1 1546822 1548213 D PFAM: protein kinase; SH3, type 3 domain protein; SMART: serine/threonine protein kinase; protein kinase 1546822..1548213 Roseiflexus sp. RS-1 5208211 YP_001275615.1 CDS RoseRS_1260 NC_009523.1 1548441 1549184 D PFAM: Silent information regulator protein Sir2; silent information regulator protein Sir2 1548441..1549184 Roseiflexus sp. RS-1 5208212 YP_001275616.1 CDS RoseRS_1261 NC_009523.1 1549231 1550010 D PFAM: Silent information regulator protein Sir2; silent information regulator protein Sir2 1549231..1550010 Roseiflexus sp. RS-1 5208213 YP_001275617.1 CDS RoseRS_1262 NC_009523.1 1550032 1550649 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1550032..1550649 Roseiflexus sp. RS-1 5208214 YP_001275618.1 CDS RoseRS_1263 NC_009523.1 1550748 1551305 D hypothetical protein 1550748..1551305 Roseiflexus sp. RS-1 5208215 YP_001275619.1 CDS RoseRS_1264 NC_009523.1 1551587 1556101 R TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' complement(1551587..1556101) Roseiflexus sp. RS-1 5208216 YP_001275620.1 CDS rpoB NC_009523.1 1556187 1559876 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(1556187..1559876) Roseiflexus sp. RS-1 5208217 YP_001275621.1 CDS RoseRS_1266 NC_009523.1 1560445 1564593 D hypothetical protein 1560445..1564593 Roseiflexus sp. RS-1 5208218 YP_001275622.1 CDS RoseRS_1267 NC_009523.1 1565015 1565542 D PFAM: TadE family protein; TadE family protein 1565015..1565542 Roseiflexus sp. RS-1 5208219 YP_001275623.1 CDS RoseRS_1268 NC_009523.1 1565566 1567302 D PFAM: PA14 domain protein; TadE family protein; SMART: PA14-related domain protein; PA14 domain-containing protein 1565566..1567302 Roseiflexus sp. RS-1 5208220 YP_001275624.1 CDS RoseRS_1269 NC_009523.1 1567444 1569918 D SMART: von Willebrand factor, type A; von Willebrand factor, type A 1567444..1569918 Roseiflexus sp. RS-1 5208221 YP_001275625.1 CDS RoseRS_1271 NC_009523.1 1571071 1573659 D PFAM: Kelch repeat-containing protein; kelch repeat-containing protein 1571071..1573659 Roseiflexus sp. RS-1 5208223 YP_001275626.1 CDS RoseRS_1272 NC_009523.1 1574761 1575777 D PFAM: SAF domain; SAF domain-containing protein 1574761..1575777 Roseiflexus sp. RS-1 5208224 YP_001275627.1 CDS RoseRS_1273 NC_009523.1 1575911 1577203 D PFAM: response regulator receiver; response regulator receiver protein 1575911..1577203 Roseiflexus sp. RS-1 5208225 YP_001275628.1 CDS RoseRS_1274 NC_009523.1 1577230 1578621 D PFAM: type II secretion system protein E; type II secretion system protein E 1577230..1578621 Roseiflexus sp. RS-1 5208226 YP_001275629.1 CDS RoseRS_1275 NC_009523.1 1578682 1579665 D PFAM: type II secretion system protein; type II secretion system protein 1578682..1579665 Roseiflexus sp. RS-1 5208227 YP_001275630.1 CDS RoseRS_1276 NC_009523.1 1579679 1580614 D PFAM: type II secretion system protein; type II secretion system protein 1579679..1580614 Roseiflexus sp. RS-1 5208228 YP_001275631.1 CDS RoseRS_1277 NC_009523.1 1580636 1581007 D PFAM: protein of unknown function DUF192; hypothetical protein 1580636..1581007 Roseiflexus sp. RS-1 5208229 YP_001275632.1 CDS RoseRS_1278 NC_009523.1 1581007 1582998 D hypothetical protein 1581007..1582998 Roseiflexus sp. RS-1 5208230 YP_001275633.1 CDS RoseRS_1279 NC_009523.1 1583008 1583280 R hypothetical protein complement(1583008..1583280) Roseiflexus sp. RS-1 5208231 YP_001275634.1 CDS RoseRS_1280 NC_009523.1 1583292 1585958 R PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase complement(1583292..1585958) Roseiflexus sp. RS-1 5208232 YP_001275635.1 CDS RoseRS_1281 NC_009523.1 1586148 1586648 R hypothetical protein complement(1586148..1586648) Roseiflexus sp. RS-1 5208233 YP_001275636.1 CDS RoseRS_1282 NC_009523.1 1586651 1587541 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(1586651..1587541) Roseiflexus sp. RS-1 5208234 YP_001275637.1 CDS RoseRS_1283 NC_009523.1 1587553 1588629 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(1587553..1588629) Roseiflexus sp. RS-1 5208235 YP_001275638.1 CDS RoseRS_1284 NC_009523.1 1588882 1589886 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1588882..1589886 Roseiflexus sp. RS-1 5208236 YP_001275639.1 CDS RoseRS_1285 NC_009523.1 1589928 1591376 D PFAM: protein of unknown function DUF95, transmembrane; ABC-2 type transporter; hypothetical protein 1589928..1591376 Roseiflexus sp. RS-1 5208237 YP_001275640.1 CDS RoseRS_1286 NC_009523.1 1591461 1592795 D TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle protein 1591461..1592795 Roseiflexus sp. RS-1 5208238 YP_001275641.1 CDS RoseRS_1287 NC_009523.1 1592825 1593112 D PFAM: ribosomal protein S16; 30S ribosomal protein S16 1592825..1593112 Roseiflexus sp. RS-1 5208239 YP_001275642.1 CDS RoseRS_1288 NC_009523.1 1593117 1593344 D RNA-binding protein 1593117..1593344 Roseiflexus sp. RS-1 5208240 YP_001275643.1 CDS RoseRS_1289 NC_009523.1 1593346 1593894 D TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA processing protein RimM 1593346..1593894 Roseiflexus sp. RS-1 5208241 YP_001275644.1 CDS RoseRS_1290 NC_009523.1 1593938 1594612 D phosphatidylserine decarboxylase 1593938..1594612 Roseiflexus sp. RS-1 5208242 YP_001275645.1 CDS RoseRS_1291 NC_009523.1 1594568 1595623 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(1594568..1595623) Roseiflexus sp. RS-1 5208243 YP_001275646.1 CDS RoseRS_1292 NC_009523.1 1595755 1596519 D PFAM: DSBA oxidoreductase; DSBA oxidoreductase 1595755..1596519 Roseiflexus sp. RS-1 5208244 YP_001275647.1 CDS RoseRS_1293 NC_009523.1 1596695 1597144 R PFAM: ferric-uptake regulator; ferric uptake regulator family protein complement(1596695..1597144) Roseiflexus sp. RS-1 5208245 YP_001275648.1 CDS RoseRS_1294 NC_009523.1 1597282 1597950 D hypothetical protein 1597282..1597950 Roseiflexus sp. RS-1 5208246 YP_001275649.1 CDS RoseRS_1295 NC_009523.1 1598016 1598741 D PFAM: NUDIX hydrolase; NUDIX hydrolase 1598016..1598741 Roseiflexus sp. RS-1 5208247 YP_001275650.1 CDS RoseRS_1296 NC_009523.1 1598759 1599004 D hypothetical protein 1598759..1599004 Roseiflexus sp. RS-1 5208248 YP_001275651.1 CDS RoseRS_1297 NC_009523.1 1599050 1601533 D PFAM: peptidase S45, penicillin amidase; peptidase S45, penicillin amidase 1599050..1601533 Roseiflexus sp. RS-1 5208249 YP_001275652.1 CDS RoseRS_1298 NC_009523.1 1601530 1602027 D PFAM: protein of unknown function DUF427; hypothetical protein 1601530..1602027 Roseiflexus sp. RS-1 5208250 YP_001275653.1 CDS RoseRS_1299 NC_009523.1 1601996 1602889 R TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine phosphorylase, family 2; inosine guanosine and xanthosine phosphorylase family protein complement(1601996..1602889) Roseiflexus sp. RS-1 5208251 YP_001275654.1 CDS RoseRS_1300 NC_009523.1 1602903 1603562 R PFAM: membrane-flanked domain; membrane-flanked domain-containing protein complement(1602903..1603562) Roseiflexus sp. RS-1 5208252 YP_001275655.1 CDS RoseRS_1301 NC_009523.1 1603567 1604418 R TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; DNA repair protein RecO complement(1603567..1604418) Roseiflexus sp. RS-1 5208253 YP_001275656.1 CDS tgt NC_009523.1 1604515 1605717 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(1604515..1605717) Roseiflexus sp. RS-1 5208254 YP_001275657.1 CDS RoseRS_1303 NC_009523.1 1605836 1607482 R hypothetical protein complement(1605836..1607482) Roseiflexus sp. RS-1 5208255 YP_001275658.1 CDS RoseRS_1304 NC_009523.1 1607505 1608101 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(1607505..1608101) Roseiflexus sp. RS-1 5208256 YP_001275659.1 CDS RoseRS_1305 NC_009523.1 1608502 1609584 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1608502..1609584 Roseiflexus sp. RS-1 5208257 YP_001275660.1 CDS RoseRS_1306 NC_009523.1 1609588 1611006 D PFAM: cell cycle protein; cell cycle protein 1609588..1611006 Roseiflexus sp. RS-1 5208258 YP_001275661.1 CDS RoseRS_1307 NC_009523.1 1610981 1612156 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; response regulator receiver sensor signal transduction histidine kinase complement(1610981..1612156) Roseiflexus sp. RS-1 5208259 YP_001275662.1 CDS RoseRS_1308 NC_009523.1 1612153 1614837 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Cache domain protein; multi-sensor signal transduction histidine kinase complement(1612153..1614837) Roseiflexus sp. RS-1 5208260 YP_001275663.1 CDS argS NC_009523.1 1615019 1616860 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1615019..1616860 Roseiflexus sp. RS-1 5208261 YP_001275664.1 CDS RoseRS_1310 NC_009523.1 1616871 1617668 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 1616871..1617668 Roseiflexus sp. RS-1 5208262 YP_001275665.1 CDS RoseRS_1311 NC_009523.1 1617746 1618081 R hypothetical protein complement(1617746..1618081) Roseiflexus sp. RS-1 5208263 YP_001275666.1 CDS RoseRS_1312 NC_009523.1 1618365 1620689 D PFAM: PHP C-terminal domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; ATPase AAA 1618365..1620689 Roseiflexus sp. RS-1 5208264 YP_001275667.1 CDS RoseRS_1313 NC_009523.1 1620712 1621677 D hypothetical protein 1620712..1621677 Roseiflexus sp. RS-1 5208265 YP_001275668.1 CDS RoseRS_1314 NC_009523.1 1621680 1622237 D hypothetical protein 1621680..1622237 Roseiflexus sp. RS-1 5208266 YP_001275669.1 CDS RoseRS_1315 NC_009523.1 1622197 1622451 R hypothetical protein complement(1622197..1622451) Roseiflexus sp. RS-1 5208267 YP_001275670.1 CDS RoseRS_1316 NC_009523.1 1623083 1624450 D nicotinic acid phosphoribosyltransferase-like protein 1623083..1624450 Roseiflexus sp. RS-1 5208268 YP_001275671.1 CDS RoseRS_1317 NC_009523.1 1624441 1626018 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1624441..1626018) Roseiflexus sp. RS-1 5208269 YP_001275672.1 CDS RoseRS_1318 NC_009523.1 1626027 1627067 R PFAM: inner-membrane translocator; inner-membrane translocator complement(1626027..1627067) Roseiflexus sp. RS-1 5208270 YP_001275673.1 CDS RoseRS_1319 NC_009523.1 1627080 1628195 R PFAM: inner-membrane translocator; inner-membrane translocator complement(1627080..1628195) Roseiflexus sp. RS-1 5208271 YP_001275674.1 CDS RoseRS_1320 NC_009523.1 1628322 1629392 R PFAM: basic membrane lipoprotein; basic membrane lipoprotein complement(1628322..1629392) Roseiflexus sp. RS-1 5208272 YP_001275675.1 CDS RoseRS_1321 NC_009523.1 1629942 1630817 D PFAM: WD-40 repeat protein; WD-40 repeat-containing protein 1629942..1630817 Roseiflexus sp. RS-1 5208273 YP_001275676.1 CDS RoseRS_1322 NC_009523.1 1631084 1631371 R PFAM: chaperonin Cpn10; chaperonin Cpn10 complement(1631084..1631371) Roseiflexus sp. RS-1 5208274 YP_001275677.1 CDS RoseRS_1323 NC_009523.1 1631415 1631669 R TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; YruB family glutaredoxin-like protein complement(1631415..1631669) Roseiflexus sp. RS-1 5208275 YP_001275678.1 CDS RoseRS_1324 NC_009523.1 1631873 1632490 R hypothetical protein complement(1631873..1632490) Roseiflexus sp. RS-1 5208276 YP_001275679.1 CDS RoseRS_1326 NC_009523.1 1633224 1634186 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(1633224..1634186) Roseiflexus sp. RS-1 5208278 YP_001275680.1 CDS RoseRS_1327 NC_009523.1 1635005 1635445 D hypothetical protein 1635005..1635445 Roseiflexus sp. RS-1 5208279 YP_001275681.1 CDS RoseRS_1328 NC_009523.1 1635706 1636044 R hypothetical protein complement(1635706..1636044) Roseiflexus sp. RS-1 5208280 YP_001275682.1 CDS RoseRS_1329 NC_009523.1 1636046 1636633 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(1636046..1636633) Roseiflexus sp. RS-1 5208281 YP_001275683.1 CDS RoseRS_1330 NC_009523.1 1636635 1638692 R PFAM: Shikimate/quinate 5-dehydrogenase; shikimate/quinate 5-dehydrogenase complement(1636635..1638692) Roseiflexus sp. RS-1 5208282 YP_001275684.1 CDS RoseRS_1331 NC_009523.1 1638784 1641039 R hypothetical protein complement(1638784..1641039) Roseiflexus sp. RS-1 5208283 YP_001275685.1 CDS RoseRS_1332 NC_009523.1 1641274 1643079 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1641274..1643079 Roseiflexus sp. RS-1 5208284 YP_001275686.1 CDS RoseRS_1333 NC_009523.1 1643137 1644150 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1643137..1644150 Roseiflexus sp. RS-1 5208285 YP_001275687.1 CDS RoseRS_1334 NC_009523.1 1644147 1645694 D TIGRFAM: MazG family protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; MazG nucleotide pyrophosphohydrolase; MazG family protein 1644147..1645694 Roseiflexus sp. RS-1 5208286 YP_001275688.1 CDS RoseRS_1335 NC_009523.1 1645701 1645928 D PFAM: protein of unknown function DUF951; hypothetical protein 1645701..1645928 Roseiflexus sp. RS-1 5208287 YP_001275689.1 CDS RoseRS_1336 NC_009523.1 1646038 1647432 D PFAM: protein of unknown function DUF107; hypothetical protein 1646038..1647432 Roseiflexus sp. RS-1 5208288 YP_001275690.1 CDS RoseRS_1337 NC_009523.1 1647449 1648294 D PFAM: band 7 protein; hypothetical protein 1647449..1648294 Roseiflexus sp. RS-1 5208289 YP_001275691.1 CDS RoseRS_1338 NC_009523.1 1648282 1649064 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(1648282..1649064) Roseiflexus sp. RS-1 5208290 YP_001275692.1 CDS RoseRS_1339 NC_009523.1 1649143 1650453 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1649143..1650453) Roseiflexus sp. RS-1 5208291 YP_001275693.1 CDS RoseRS_1340 NC_009523.1 1650610 1651842 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1650610..1651842) Roseiflexus sp. RS-1 5208292 YP_001275694.1 CDS RoseRS_1341 NC_009523.1 1652168 1652914 D PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 1652168..1652914 Roseiflexus sp. RS-1 5208293 YP_001275695.1 CDS RoseRS_1342 NC_009523.1 1652904 1653761 D PFAM: ExsB family protein; PP-loop domain protein; ExsB family protein 1652904..1653761 Roseiflexus sp. RS-1 5208294 YP_001275696.1 CDS RoseRS_1343 NC_009523.1 1653982 1654797 R PFAM: peptidase M23B; peptidase M23B complement(1653982..1654797) Roseiflexus sp. RS-1 5208295 YP_001275697.1 CDS RoseRS_1344 NC_009523.1 1654997 1655251 D TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; YruB family glutaredoxin-like protein 1654997..1655251 Roseiflexus sp. RS-1 5208296 YP_001275698.1 CDS RoseRS_1345 NC_009523.1 1655295 1655582 D PFAM: chaperonin Cpn10; chaperonin Cpn10 1655295..1655582 Roseiflexus sp. RS-1 5208297 YP_001275699.1 CDS RoseRS_1348 NC_009523.1 1657159 1658115 D hypothetical protein 1657159..1658115 Roseiflexus sp. RS-1 5208300 YP_001275700.1 CDS RoseRS_1349 NC_009523.1 1658150 1658650 D hypothetical protein 1658150..1658650 Roseiflexus sp. RS-1 5208301 YP_001275701.1 CDS RoseRS_1351 NC_009523.1 1658954 1659934 R PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; ornithine cyclodeaminase complement(1658954..1659934) Roseiflexus sp. RS-1 5208303 YP_001275702.1 CDS RoseRS_1352 NC_009523.1 1659915 1660733 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KR; short-chain dehydrogenase/reductase SDR complement(1659915..1660733) Roseiflexus sp. RS-1 5208304 YP_001275703.1 CDS RoseRS_1353 NC_009523.1 1660739 1661170 R hypothetical protein complement(1660739..1661170) Roseiflexus sp. RS-1 5208305 YP_001275704.1 CDS RoseRS_1354 NC_009523.1 1661271 1662449 R PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein complement(1661271..1662449) Roseiflexus sp. RS-1 5208306 YP_001275705.1 CDS RoseRS_1355 NC_009523.1 1662550 1663503 D PFAM: regulatory protein GntR, HTH; regulatory protein GntR 1662550..1663503 Roseiflexus sp. RS-1 5208307 YP_001275706.1 CDS RoseRS_1356 NC_009523.1 1663500 1665551 D PFAM: glycoside hydrolase, clan GH-D; glycoside hydrolase 1663500..1665551 Roseiflexus sp. RS-1 5208308 YP_001275707.1 CDS RoseRS_1357 NC_009523.1 1665649 1666599 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1665649..1666599 Roseiflexus sp. RS-1 5208309 YP_001275708.1 CDS RoseRS_1358 NC_009523.1 1666599 1667474 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1666599..1667474 Roseiflexus sp. RS-1 5208310 YP_001275709.1 CDS RoseRS_1359 NC_009523.1 1667499 1668875 D PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 1667499..1668875 Roseiflexus sp. RS-1 5208311 YP_001275710.1 CDS RoseRS_1360 NC_009523.1 1668880 1670904 D PFAM: glycoside hydrolase, clan GH-D; glycoside hydrolase 1668880..1670904 Roseiflexus sp. RS-1 5208312 YP_001275711.1 CDS RoseRS_1361 NC_009523.1 1670901 1671887 D hypothetical protein 1670901..1671887 Roseiflexus sp. RS-1 5208313 YP_001275712.1 CDS RoseRS_1362 NC_009523.1 1671884 1672657 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 1671884..1672657 Roseiflexus sp. RS-1 5208314 YP_001275713.1 CDS RoseRS_1363 NC_009523.1 1672765 1675224 D PFAM: Spermine synthase; spermine synthase 1672765..1675224 Roseiflexus sp. RS-1 5208315 YP_001275714.1 CDS RoseRS_1364 NC_009523.1 1675419 1676417 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein 1675419..1676417 Roseiflexus sp. RS-1 5208316 YP_001275715.1 CDS RoseRS_1365 NC_009523.1 1676452 1677519 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein 1676452..1677519 Roseiflexus sp. RS-1 5208317 YP_001275716.1 CDS RoseRS_1366 NC_009523.1 1677689 1678309 D hypothetical protein 1677689..1678309 Roseiflexus sp. RS-1 5208318 YP_001275717.1 CDS RoseRS_1367 NC_009523.1 1678312 1678578 D TIGRFAM: conserved hypothetical selenoprotein; putative selenoprotein 1678312..1678578 Roseiflexus sp. RS-1 5208319 YP_001275718.1 CDS RoseRS_1368 NC_009523.1 1678547 1679098 R PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase complement(1678547..1679098) Roseiflexus sp. RS-1 5208320 YP_001275719.1 CDS RoseRS_1369 NC_009523.1 1679383 1680153 R PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein complement(1679383..1680153) Roseiflexus sp. RS-1 5208321 YP_001275720.1 CDS RoseRS_1370 NC_009523.1 1680150 1681253 R PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(1680150..1681253) Roseiflexus sp. RS-1 5208322 YP_001275721.1 CDS RoseRS_1371 NC_009523.1 1681287 1681565 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(1681287..1681565) Roseiflexus sp. RS-1 5208323 YP_001275722.1 CDS RoseRS_1372 NC_009523.1 1681566 1682774 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(1681566..1682774) Roseiflexus sp. RS-1 5208324 YP_001275723.1 CDS RoseRS_1373 NC_009523.1 1682821 1684143 R hypothetical protein complement(1682821..1684143) Roseiflexus sp. RS-1 5208325 YP_001275724.1 CDS RoseRS_1374 NC_009523.1 1684316 1685329 D PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; GHMP kinase 1684316..1685329 Roseiflexus sp. RS-1 5208326 YP_001275725.1 CDS RoseRS_1375 NC_009523.1 1685384 1686319 D PFAM: Indigoidine synthase A family protein; indigoidine synthase A family protein 1685384..1686319 Roseiflexus sp. RS-1 5208327 YP_001275726.1 CDS RoseRS_1376 NC_009523.1 1686316 1687515 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1686316..1687515 Roseiflexus sp. RS-1 5208328 YP_001275727.1 CDS RoseRS_1377 NC_009523.1 1688035 1689207 D PFAM: aminotransferase, class V; class V aminotransferase 1688035..1689207 Roseiflexus sp. RS-1 5208329 YP_001275728.1 CDS RoseRS_1378 NC_009523.1 1689378 1690472 D hypothetical protein 1689378..1690472 Roseiflexus sp. RS-1 5208330 YP_001275729.1 CDS RoseRS_1379 NC_009523.1 1690582 1692507 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(1690582..1692507) Roseiflexus sp. RS-1 5208331 YP_001275730.1 CDS RoseRS_1380 NC_009523.1 1692527 1692928 R hypothetical protein complement(1692527..1692928) Roseiflexus sp. RS-1 5208332 YP_001275731.1 CDS RoseRS_1381 NC_009523.1 1693096 1693599 R hypothetical protein complement(1693096..1693599) Roseiflexus sp. RS-1 5208333 YP_001275732.1 CDS RoseRS_1382 NC_009523.1 1694145 1694958 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein join(1694145..1694543,1694545..1694958) Roseiflexus sp. RS-1 5208334 YP_001275733.1 CDS RoseRS_1383 NC_009523.1 1695409 1696466 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(1695409..1695939,1695939..1696466) Roseiflexus sp. RS-1 5208335 YP_001275734.1 CDS RoseRS_1384 NC_009523.1 1696508 1696981 R hypothetical protein complement(1696508..1696981) Roseiflexus sp. RS-1 5208336 YP_001275735.1 CDS RoseRS_1385 NC_009523.1 1697021 1697554 R hypothetical protein complement(1697021..1697554) Roseiflexus sp. RS-1 5208337 YP_001275736.1 CDS RoseRS_1386 NC_009523.1 1697986 1698501 R hypothetical protein complement(1697986..1698501) Roseiflexus sp. RS-1 5208338 YP_001275737.1 CDS RoseRS_1387 NC_009523.1 1699103 1699444 R hypothetical protein complement(1699103..1699444) Roseiflexus sp. RS-1 5208339 YP_001275738.1 CDS RoseRS_1388 NC_009523.1 1699537 1700190 R hypothetical protein complement(1699537..1700190) Roseiflexus sp. RS-1 5208340 YP_001275739.1 CDS RoseRS_1389 NC_009523.1 1700205 1701011 R hypothetical protein complement(1700205..1701011) Roseiflexus sp. RS-1 5208341 YP_001275740.1 CDS RoseRS_1390 NC_009523.1 1701015 1701542 R hypothetical protein complement(1701015..1701542) Roseiflexus sp. RS-1 5208342 YP_001275741.1 CDS RoseRS_1391 NC_009523.1 1701667 1701939 R hypothetical protein complement(1701667..1701939) Roseiflexus sp. RS-1 5208343 YP_001275742.1 CDS RoseRS_1392 NC_009523.1 1701958 1702581 R hypothetical protein complement(1701958..1702581) Roseiflexus sp. RS-1 5208344 YP_001275743.1 CDS RoseRS_1393 NC_009523.1 1702602 1703030 R PFAM: TadE family protein; TadE family protein complement(1702602..1703030) Roseiflexus sp. RS-1 5208345 YP_001275744.1 CDS RoseRS_1394 NC_009523.1 1703034 1703504 R PFAM: TadE family protein; TadE family protein complement(1703034..1703504) Roseiflexus sp. RS-1 5208346 YP_001275745.1 CDS RoseRS_1395 NC_009523.1 1703587 1703829 R hypothetical protein complement(1703587..1703829) Roseiflexus sp. RS-1 5208347 YP_001275746.1 CDS RoseRS_1396 NC_009523.1 1704133 1705647 D PFAM: von Willebrand factor, type A; von Willebrand factor, type A 1704133..1705647 Roseiflexus sp. RS-1 5208348 YP_001275747.1 CDS RoseRS_1397 NC_009523.1 1706457 1707242 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 1706457..1707242 Roseiflexus sp. RS-1 5208349 YP_001275748.1 CDS RoseRS_1398 NC_009523.1 1707309 1707875 R hypothetical protein complement(1707309..1707875) Roseiflexus sp. RS-1 5208350 YP_001275749.1 CDS RoseRS_1399 NC_009523.1 1707878 1708777 R PFAM: type II secretion system protein; type II secretion system protein complement(1707878..1708777) Roseiflexus sp. RS-1 5208351 YP_001275750.1 CDS RoseRS_1400 NC_009523.1 1708798 1709472 R hypothetical protein complement(1708798..1709472) Roseiflexus sp. RS-1 5208352 YP_001275751.1 CDS RoseRS_1401 NC_009523.1 1709503 1710171 R hypothetical protein complement(1709503..1710171) Roseiflexus sp. RS-1 5208353 YP_001275752.1 CDS RoseRS_1402 NC_009523.1 1710218 1710628 R hypothetical protein complement(1710218..1710628) Roseiflexus sp. RS-1 5208354 YP_001275753.1 CDS RoseRS_1403 NC_009523.1 1710906 1711283 R hypothetical protein complement(1710906..1711283) Roseiflexus sp. RS-1 5208355 YP_001275754.1 CDS RoseRS_1404 NC_009523.1 1711608 1712918 R hypothetical protein complement(1711608..1712918) Roseiflexus sp. RS-1 5208356 YP_001275755.1 CDS RoseRS_1405 NC_009523.1 1713276 1713878 R PFAM: RDD domain containing protein; RDD domain-containing protein complement(1713276..1713878) Roseiflexus sp. RS-1 5208357 YP_001275756.1 CDS RoseRS_1406 NC_009523.1 1713919 1714299 R hypothetical protein complement(1713919..1714299) Roseiflexus sp. RS-1 5208358 YP_001275757.1 CDS RoseRS_1407 NC_009523.1 1714646 1715197 R hypothetical protein complement(1714646..1715197) Roseiflexus sp. RS-1 5208359 YP_001275758.1 CDS RoseRS_1408 NC_009523.1 1715284 1715835 R hypothetical protein complement(1715284..1715835) Roseiflexus sp. RS-1 5208360 YP_001275759.1 CDS RoseRS_1409 NC_009523.1 1715862 1716308 R hypothetical protein complement(1715862..1716308) Roseiflexus sp. RS-1 5208361 YP_001275760.1 CDS RoseRS_1410 NC_009523.1 1716877 1717734 R PFAM: aldo/keto reductase; aldo/keto reductase complement(1716877..1717734) Roseiflexus sp. RS-1 5208362 YP_001275761.1 CDS RoseRS_1411 NC_009523.1 1717878 1720538 D hypothetical protein 1717878..1720538 Roseiflexus sp. RS-1 5208363 YP_001275762.1 CDS RoseRS_1412 NC_009523.1 1720741 1721295 R PFAM: protein of unknown function DUF820; hypothetical protein complement(1720741..1721295) Roseiflexus sp. RS-1 5208364 YP_001275763.1 CDS RoseRS_1413 NC_009523.1 1721901 1722455 R PFAM: protein of unknown function DUF820; hypothetical protein complement(1721901..1722455) Roseiflexus sp. RS-1 5208365 YP_001275764.1 CDS RoseRS_1414 NC_009523.1 1722738 1723568 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(1722738..1723568) Roseiflexus sp. RS-1 5208366 YP_001275765.1 CDS RoseRS_1415 NC_009523.1 1723578 1724516 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(1723578..1724516) Roseiflexus sp. RS-1 5208367 YP_001275766.1 CDS RoseRS_1416 NC_009523.1 1724941 1725786 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; dTDP-4-dehydrorhamnose reductase complement(1724941..1725786) Roseiflexus sp. RS-1 5208368 YP_001275767.1 CDS RoseRS_1417 NC_009523.1 1726051 1726425 D hypothetical protein 1726051..1726425 Roseiflexus sp. RS-1 5208369 YP_001275768.1 CDS RoseRS_1418 NC_009523.1 1726431 1728089 D hypothetical protein 1726431..1728089 Roseiflexus sp. RS-1 5208370 YP_001275769.1 CDS RoseRS_1419 NC_009523.1 1728115 1729542 R PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase dimerisation domain-containing protein complement(1728115..1729542) Roseiflexus sp. RS-1 5208371 YP_001275770.1 CDS RoseRS_1420 NC_009523.1 1729990 1731237 D SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein 1729990..1731237 Roseiflexus sp. RS-1 5208372 YP_001275771.1 CDS RoseRS_1421 NC_009523.1 1732395 1734080 R hypothetical protein complement(1732395..1734080) Roseiflexus sp. RS-1 5208375 YP_001275772.1 CDS RoseRS_1423 NC_009523.1 1734816 1735061 D hypothetical protein 1734816..1735061 Roseiflexus sp. RS-1 5208377 YP_001275773.1 CDS RoseRS_1424 NC_009523.1 1735058 1735324 D PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 1735058..1735324 Roseiflexus sp. RS-1 5208378 YP_001275774.1 CDS RoseRS_1426 NC_009523.1 1736722 1738017 R hypothetical protein complement(1736722..1738017) Roseiflexus sp. RS-1 5208380 YP_001275775.1 CDS RoseRS_1427 NC_009523.1 1738170 1738640 D hypothetical protein 1738170..1738640 Roseiflexus sp. RS-1 5208381 YP_001275776.1 CDS RoseRS_1428 NC_009523.1 1738716 1740152 R PFAM: pyruvate kinase; pyruvate kinase complement(1738716..1740152) Roseiflexus sp. RS-1 5208382 YP_001275777.1 CDS RoseRS_1429 NC_009523.1 1740152 1740814 R PFAM: helix-hairpin-helix motif; helix-hairpin-helix DNA-binding motif-containing protein complement(1740152..1740814) Roseiflexus sp. RS-1 5208383 YP_001275778.1 CDS RoseRS_1430 NC_009523.1 1741028 1743397 R TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; DNA topoisomerase I complement(1741028..1743397) Roseiflexus sp. RS-1 5208384 YP_001275779.1 CDS RoseRS_1431 NC_009523.1 1743784 1744689 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1743784..1744689) Roseiflexus sp. RS-1 5208385 YP_001275780.1 CDS RoseRS_1432 NC_009523.1 1744876 1745661 R hypothetical protein complement(1744876..1745661) Roseiflexus sp. RS-1 5208386 YP_001275781.1 CDS RoseRS_1433 NC_009523.1 1745802 1746677 R PFAM: Arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase complement(1745802..1746677) Roseiflexus sp. RS-1 5208387 YP_001275782.1 CDS RoseRS_1434 NC_009523.1 1746725 1749898 R PFAM: glycoside hydrolase, family 38; glycosyl hydrolase 38 domain protein; Alpha-mannosidase complement(1746725..1749898) Roseiflexus sp. RS-1 5208388 YP_001275783.1 CDS RoseRS_1435 NC_009523.1 1750293 1750553 R PFAM: protein of unknown function UPF0150; hypothetical protein complement(1750293..1750553) Roseiflexus sp. RS-1 5208389 YP_001275784.1 CDS RoseRS_1438 NC_009523.1 1752154 1753797 D hypothetical protein 1752154..1753797 Roseiflexus sp. RS-1 5208392 YP_001275785.1 CDS RoseRS_1439 NC_009523.1 1753797 1754468 D PFAM: protein of unknown function DUF324; hypothetical protein 1753797..1754468 Roseiflexus sp. RS-1 5208393 YP_001275786.1 CDS RoseRS_1440 NC_009523.1 1754446 1755654 D TIGRFAM: CRISPR-associated RAMP protein, Csx10 family; CRISPR-associated RAMP Csx10 family protein 1754446..1755654 Roseiflexus sp. RS-1 5208394 YP_001275787.1 CDS RoseRS_1441 NC_009523.1 1755657 1756037 D hypothetical protein 1755657..1756037 Roseiflexus sp. RS-1 5208395 YP_001275788.1 CDS RoseRS_1442 NC_009523.1 1756034 1756837 D TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; PFAM: protein of unknown function DUF324; CRISPR-associated Csm3 family protein 1756034..1756837 Roseiflexus sp. RS-1 5208396 YP_001275789.1 CDS RoseRS_1443 NC_009523.1 1756848 1757732 D PFAM: protein of unknown function DUF324; hypothetical protein 1756848..1757732 Roseiflexus sp. RS-1 5208397 YP_001275790.1 CDS RoseRS_1444 NC_009523.1 1757743 1758198 D hypothetical protein 1757743..1758198 Roseiflexus sp. RS-1 5208398 YP_001275791.1 CDS RoseRS_1445 NC_009523.1 1758195 1759187 D PFAM: protein of unknown function DUF324; hypothetical protein 1758195..1759187 Roseiflexus sp. RS-1 5208399 YP_001275792.1 CDS RoseRS_1446 NC_009523.1 1759971 1760978 D hypothetical protein 1759971..1760978 Roseiflexus sp. RS-1 5208400 YP_001275793.1 CDS RoseRS_1447 NC_009523.1 1761000 1761956 D hypothetical protein 1761000..1761956 Roseiflexus sp. RS-1 5208401 YP_001275794.1 CDS RoseRS_1448 NC_009523.1 1761989 1762894 D hypothetical protein 1761989..1762894 Roseiflexus sp. RS-1 5208402 YP_001275795.1 CDS RoseRS_1449 NC_009523.1 1762946 1763389 D hypothetical protein 1762946..1763389 Roseiflexus sp. RS-1 5208403 YP_001275796.1 CDS RoseRS_1450 NC_009523.1 1763386 1763733 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1763386..1763733 Roseiflexus sp. RS-1 5208404 YP_001275797.1 CDS RoseRS_1451 NC_009523.1 1763720 1764121 D PFAM: HEPN domain protein; HEPN domain-containing protein 1763720..1764121 Roseiflexus sp. RS-1 5208405 YP_001275798.1 CDS trpD NC_009523.1 1764943 1765968 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(1764943..1765968) Roseiflexus sp. RS-1 5208406 YP_001275799.1 CDS RoseRS_1453 NC_009523.1 1765955 1767379 R hypothetical protein complement(1765955..1767379) Roseiflexus sp. RS-1 5208407 YP_001275800.1 CDS RoseRS_1454 NC_009523.1 1767381 1767947 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase complement(1767381..1767947) Roseiflexus sp. RS-1 5208408 YP_001275801.1 CDS RoseRS_1455 NC_009523.1 1767944 1769488 R TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; anthranilate synthase component I complement(1767944..1769488) Roseiflexus sp. RS-1 5208409 YP_001275802.1 CDS RoseRS_1456 NC_009523.1 1770282 1771289 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(1770282..1771289) Roseiflexus sp. RS-1 5208410 YP_001275803.1 CDS RoseRS_1457 NC_009523.1 1771401 1773326 D hypothetical protein 1771401..1773326 Roseiflexus sp. RS-1 5208411 YP_001275804.1 CDS RoseRS_1458 NC_009523.1 1773338 1774105 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(1773338..1774105) Roseiflexus sp. RS-1 5208412 YP_001275805.1 CDS RoseRS_1459 NC_009523.1 1774122 1775480 R catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta complement(1774122..1775480) Roseiflexus sp. RS-1 5208413 YP_001275806.1 CDS RoseRS_1460 NC_009523.1 1776124 1776882 D hypothetical protein 1776124..1776882 Roseiflexus sp. RS-1 5208414 YP_001275807.1 CDS RoseRS_1461 NC_009523.1 1776996 1777241 R hypothetical protein complement(1776996..1777241) Roseiflexus sp. RS-1 5208415 YP_001275808.1 CDS RoseRS_1462 NC_009523.1 1777254 1777775 R PFAM: Forkhead-associated protein; FHA domain-containing protein complement(1777254..1777775) Roseiflexus sp. RS-1 5208416 YP_001275809.1 CDS RoseRS_1463 NC_009523.1 1777852 1779129 R PFAM: von Willebrand factor, type A; von Willebrand factor, type A complement(1777852..1779129) Roseiflexus sp. RS-1 5208417 YP_001275810.1 CDS RoseRS_1464 NC_009523.1 1779237 1780205 R PFAM: protein phosphatase 2C domain protein; protein phosphatase 2C domain-containing protein complement(1779237..1780205) Roseiflexus sp. RS-1 5208418 YP_001275811.1 CDS RoseRS_1465 NC_009523.1 1780283 1782244 R PFAM: protein kinase; Pyrrolo-quinoline quinone; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase complement(1780283..1782244) Roseiflexus sp. RS-1 5208419 YP_001275812.1 CDS RoseRS_1466 NC_009523.1 1782685 1783308 D hypothetical protein 1782685..1783308 Roseiflexus sp. RS-1 5208420 YP_001275813.1 CDS RoseRS_1467 NC_009523.1 1783339 1784499 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(1783339..1784499) Roseiflexus sp. RS-1 5208421 YP_001275814.1 CDS RoseRS_1468 NC_009523.1 1785847 1786872 D transcriptional regulator-like protein 1785847..1786872 Roseiflexus sp. RS-1 5208423 YP_001275815.1 CDS RoseRS_1469 NC_009523.1 1787917 1790388 R TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(1787917..1790388) Roseiflexus sp. RS-1 5208424 YP_001275816.1 CDS RoseRS_1470 NC_009523.1 1790728 1791576 R hypothetical protein complement(1790728..1791576) Roseiflexus sp. RS-1 5208425 YP_001275817.1 CDS RoseRS_1471 NC_009523.1 1791594 1792166 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(1791594..1792166) Roseiflexus sp. RS-1 5208426 YP_001275818.1 CDS RoseRS_1472 NC_009523.1 1792378 1792632 D hypothetical protein 1792378..1792632 Roseiflexus sp. RS-1 5208427 YP_001275819.1 CDS pgk NC_009523.1 1792694 1793881 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(1792694..1793881) Roseiflexus sp. RS-1 5208428 YP_001275820.1 CDS RoseRS_1474 NC_009523.1 1794013 1794660 R hypothetical protein complement(1794013..1794660) Roseiflexus sp. RS-1 5208429 YP_001275821.1 CDS RoseRS_1475 NC_009523.1 1794657 1795736 R hypothetical protein complement(1794657..1795736) Roseiflexus sp. RS-1 5208430 YP_001275822.1 CDS RoseRS_1476 NC_009523.1 1795733 1796476 R hypothetical protein complement(1795733..1796476) Roseiflexus sp. RS-1 5208431 YP_001275823.1 CDS RoseRS_1477 NC_009523.1 1796590 1797647 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(1796590..1797120,1797120..1797647) Roseiflexus sp. RS-1 5208432 YP_001275824.1 CDS RoseRS_1478 NC_009523.1 1797654 1800170 R hypothetical protein complement(1797654..1800170) Roseiflexus sp. RS-1 5208433 YP_001275825.1 CDS RoseRS_1479 NC_009523.1 1800175 1803597 R PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; helicase domain-containing protein complement(1800175..1803597) Roseiflexus sp. RS-1 5208434 YP_001275826.1 CDS RoseRS_1481 NC_009523.1 1804179 1804898 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 1804179..1804898 Roseiflexus sp. RS-1 5208436 YP_001275827.1 CDS RoseRS_1482 NC_009523.1 1804873 1806039 R hypothetical protein complement(1804873..1806039) Roseiflexus sp. RS-1 5208437 YP_001275828.1 CDS RoseRS_1483 NC_009523.1 1806093 1807019 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 1806093..1807019 Roseiflexus sp. RS-1 5208438 YP_001275829.1 CDS RoseRS_1484 NC_009523.1 1807168 1808136 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(1807168..1808136) Roseiflexus sp. RS-1 5208439 YP_001275830.1 CDS RoseRS_1485 NC_009523.1 1808136 1811825 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase complement(1808136..1811825) Roseiflexus sp. RS-1 5208440 YP_001275831.1 CDS RoseRS_1486 NC_009523.1 1812624 1813877 D hypothetical protein 1812624..1813877 Roseiflexus sp. RS-1 5208441 YP_001275832.1 CDS RoseRS_1487 NC_009523.1 1814074 1814826 D hypothetical protein 1814074..1814826 Roseiflexus sp. RS-1 5208442 YP_001275833.1 CDS RoseRS_1488 NC_009523.1 1814946 1816013 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 1814946..1816013 Roseiflexus sp. RS-1 5208443 YP_001275834.1 CDS RoseRS_1489 NC_009523.1 1816020 1817258 D PFAM: protein of unknown function DUF395, YeeE/YedE; hypothetical protein 1816020..1817258 Roseiflexus sp. RS-1 5208444 YP_001275835.1 CDS RoseRS_1490 NC_009523.1 1817280 1818809 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1817280..1818809) Roseiflexus sp. RS-1 5208445 YP_001275836.1 CDS RoseRS_1491 NC_009523.1 1819019 1820236 R hypothetical protein complement(1819019..1820236) Roseiflexus sp. RS-1 5208446 YP_001275837.1 CDS RoseRS_1492 NC_009523.1 1820692 1821630 D TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1820692..1821630 Roseiflexus sp. RS-1 5208447 YP_001275838.1 CDS RoseRS_1493 NC_009523.1 1821862 1822086 R hypothetical protein complement(1821862..1822086) Roseiflexus sp. RS-1 5208448 YP_001275839.1 CDS RoseRS_1494 NC_009523.1 1822222 1822626 D PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 1822222..1822626 Roseiflexus sp. RS-1 5208449 YP_001275840.1 CDS RoseRS_1495 NC_009523.1 1822614 1823213 R PFAM: ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein complement(1822614..1823213) Roseiflexus sp. RS-1 5208450 YP_001275841.1 CDS RoseRS_1496 NC_009523.1 1823294 1823878 R hypothetical protein complement(1823294..1823878) Roseiflexus sp. RS-1 5208451 YP_001275842.1 CDS RoseRS_1497 NC_009523.1 1823875 1824117 R hypothetical protein complement(1823875..1824117) Roseiflexus sp. RS-1 5208452 YP_001275843.1 CDS RoseRS_1498 NC_009523.1 1824459 1824899 R PFAM: cytochrome c, class I; cytochrome c, class I complement(1824459..1824899) Roseiflexus sp. RS-1 5208453 YP_001275844.1 CDS RoseRS_1499 NC_009523.1 1825022 1825483 R hypothetical protein complement(1825022..1825483) Roseiflexus sp. RS-1 5208454 YP_001275845.1 CDS RoseRS_1500 NC_009523.1 1825582 1827354 R PFAM: copper resistance protein CopC; copper resistance D domain protein; copper resistance protein CopC complement(1825582..1827354) Roseiflexus sp. RS-1 5208455 YP_001275846.1 CDS RoseRS_1501 NC_009523.1 1827776 1828294 R PFAM: copper resistance protein CopC; copper resistance protein CopC complement(1827776..1828294) Roseiflexus sp. RS-1 5208456 YP_001275847.1 CDS RoseRS_1502 NC_009523.1 1828486 1828836 R hypothetical protein complement(1828486..1828836) Roseiflexus sp. RS-1 5208457 YP_001275848.1 CDS RoseRS_1504 NC_009523.1 1829779 1830462 R PFAM: Ferric reductase domain protein transmembrane component, N-terminal domain; ferric reductase domain-containing protein complement(1829779..1830462) Roseiflexus sp. RS-1 5208459 YP_001275849.1 CDS RoseRS_1505 NC_009523.1 1830595 1831554 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY complement(1830595..1831554) Roseiflexus sp. RS-1 5208460 YP_001275850.1 CDS RoseRS_1506 NC_009523.1 1831722 1832651 R TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase A complement(1831722..1832651) Roseiflexus sp. RS-1 5208461 YP_001275851.1 CDS RoseRS_1507 NC_009523.1 1832781 1834175 D hypothetical protein 1832781..1834175 Roseiflexus sp. RS-1 5208462 YP_001275852.1 CDS RoseRS_1508 NC_009523.1 1834167 1834598 R hypothetical protein complement(1834167..1834598) Roseiflexus sp. RS-1 5208463 YP_001275853.1 CDS RoseRS_1509 NC_009523.1 1834733 1835713 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; UDP-glucose 4-epimerase 1834733..1835713 Roseiflexus sp. RS-1 5208464 YP_001275854.1 CDS RoseRS_1510 NC_009523.1 1835720 1837975 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1835720..1837975) Roseiflexus sp. RS-1 5208465 YP_001275855.1 CDS RoseRS_1511 NC_009523.1 1838289 1839251 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 1838289..1839251 Roseiflexus sp. RS-1 5208466 YP_001275856.1 CDS RoseRS_1512 NC_009523.1 1839910 1841595 D PFAM: transcriptional activator domain; response regulator receiver/SARP domain-containing protein 1839910..1841595 Roseiflexus sp. RS-1 5208467 YP_001275857.1 CDS RoseRS_1513 NC_009523.1 1842144 1845494 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; protease domain-containing protein 1842144..1845494 Roseiflexus sp. RS-1 5208468 YP_001275858.1 CDS RoseRS_1514 NC_009523.1 1845838 1846104 D hypothetical protein 1845838..1846104 Roseiflexus sp. RS-1 5208469 YP_001275859.1 CDS RoseRS_1515 NC_009523.1 1846566 1847165 R hypothetical protein complement(1846566..1847165) Roseiflexus sp. RS-1 5208470 YP_001275860.1 CDS RoseRS_1517 NC_009523.1 1848936 1849703 D coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein 1848936..1849703 Roseiflexus sp. RS-1 5208472 YP_001275861.1 CDS RoseRS_1518 NC_009523.1 1849736 1850377 D hypothetical protein 1849736..1850377 Roseiflexus sp. RS-1 5208473 YP_001275862.1 CDS RoseRS_1519 NC_009523.1 1850385 1852673 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase complement(1850385..1852673) Roseiflexus sp. RS-1 5208474 YP_001275863.1 CDS RoseRS_1520 NC_009523.1 1852866 1856063 R PFAM: Forkhead-associated protein; peptidase C11, clostripain; FHA domain-containing protein complement(1852866..1856063) Roseiflexus sp. RS-1 5208475 YP_001275864.1 CDS RoseRS_1521 NC_009523.1 1856266 1857084 R TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; glutamate racemase complement(1856266..1857084) Roseiflexus sp. RS-1 5208476 YP_001275865.1 CDS RoseRS_1522 NC_009523.1 1857844 1859397 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(1857844..1859397) Roseiflexus sp. RS-1 5208477 YP_001275866.1 CDS RoseRS_1523 NC_009523.1 1859410 1860318 R hypothetical protein complement(1859410..1860318) Roseiflexus sp. RS-1 5208478 YP_001275867.1 CDS RoseRS_1524 NC_009523.1 1860356 1861693 R PFAM: glycine cleavage system P-protein; glycine dehydrogenase complement(1860356..1861693) Roseiflexus sp. RS-1 5208479 YP_001275868.1 CDS RoseRS_1525 NC_009523.1 1861903 1862292 R TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein complement(1861903..1862292) Roseiflexus sp. RS-1 5208480 YP_001275869.1 CDS RoseRS_1526 NC_009523.1 1862335 1863450 R TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; glycine cleavage system T protein complement(1862335..1863450) Roseiflexus sp. RS-1 5208481 YP_001275870.1 CDS RoseRS_1527 NC_009523.1 1863753 1864526 R PFAM: response regulator receiver; response regulator receiver protein complement(1863753..1864526) Roseiflexus sp. RS-1 5208482 YP_001275871.1 CDS RoseRS_1528 NC_009523.1 1864513 1867488 R PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase complement(1864513..1867488) Roseiflexus sp. RS-1 5208483 YP_001275872.1 CDS RoseRS_1529 NC_009523.1 1867735 1870059 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 1867735..1870059 Roseiflexus sp. RS-1 5208484 YP_001275873.1 CDS RoseRS_1530 NC_009523.1 1870078 1871220 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1870078..1871220 Roseiflexus sp. RS-1 5208485 YP_001275874.1 CDS RoseRS_1531 NC_009523.1 1871245 1872207 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(1871245..1872207) Roseiflexus sp. RS-1 5208486 YP_001275875.1 CDS RoseRS_1532 NC_009523.1 1872827 1874002 D PFAM: PT repeat-containing protein; PT repeat-containing protein 1872827..1874002 Roseiflexus sp. RS-1 5208487 YP_001275876.1 CDS recR NC_009523.1 1874007 1874624 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(1874007..1874624) Roseiflexus sp. RS-1 5208488 YP_001275877.1 CDS RoseRS_1534 NC_009523.1 1874655 1874957 R PFAM: conserved hypothetical protein 103; hypothetical protein complement(1874655..1874957) Roseiflexus sp. RS-1 5208489 YP_001275878.1 CDS RoseRS_1535 NC_009523.1 1874973 1876772 R TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau complement(1874973..1876772) Roseiflexus sp. RS-1 5208490 YP_001275879.1 CDS RoseRS_1536 NC_009523.1 1877768 1878733 D hypothetical protein 1877768..1878733 Roseiflexus sp. RS-1 5208491 YP_001275880.1 CDS RoseRS_1537 NC_009523.1 1878817 1879668 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(1878817..1879668) Roseiflexus sp. RS-1 5208492 YP_001275881.1 CDS RoseRS_1538 NC_009523.1 1879693 1880625 R PFAM: protein of unknown function DUF849; hypothetical protein complement(1879693..1880625) Roseiflexus sp. RS-1 5208493 YP_001275882.1 CDS RoseRS_1539 NC_009523.1 1880643 1881347 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1880643..1881347) Roseiflexus sp. RS-1 5208494 YP_001275883.1 CDS RoseRS_1540 NC_009523.1 1881334 1882062 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1881334..1882062) Roseiflexus sp. RS-1 5208495 YP_001275884.1 CDS RoseRS_1541 NC_009523.1 1882083 1882844 R PFAM: cyclase family protein; cyclase family protein complement(1882083..1882844) Roseiflexus sp. RS-1 5208496 YP_001275885.1 CDS RoseRS_1543 NC_009523.1 1884244 1885113 R PFAM: inner-membrane translocator; inner-membrane translocator complement(1884244..1885113) Roseiflexus sp. RS-1 5208498 YP_001275886.1 CDS RoseRS_1544 NC_009523.1 1885120 1886406 R PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(1885120..1886406) Roseiflexus sp. RS-1 5208499 YP_001275887.1 CDS RoseRS_1545 NC_009523.1 1886434 1886964 R PFAM: GntR domain protein; GntR family transcriptional regulator complement(1886434..1886964) Roseiflexus sp. RS-1 5208500 YP_001275888.1 CDS RoseRS_1546 NC_009523.1 1887629 1889587 R PFAM: glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase complement(1887629..1889587) Roseiflexus sp. RS-1 5208501 YP_001275889.1 CDS RoseRS_1547 NC_009523.1 1890089 1891981 R PFAM: glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase complement(1890089..1891981) Roseiflexus sp. RS-1 5208502 YP_001275890.1 CDS RoseRS_1548 NC_009523.1 1892318 1893868 D TIGRFAM: putative delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; putative delta-1-pyrroline-5-carboxylate dehydrogenase 1892318..1893868 Roseiflexus sp. RS-1 5208503 YP_001275891.1 CDS RoseRS_1549 NC_009523.1 1894197 1895738 D PFAM: peptidase M32, carboxypeptidase Taq metallopeptidase; carboxypeptidase Taq 1894197..1895738 Roseiflexus sp. RS-1 5208504 YP_001275892.1 CDS RoseRS_1550 NC_009523.1 1895793 1896509 D PFAM: Rare lipoprotein A; rare lipoprotein A 1895793..1896509 Roseiflexus sp. RS-1 5208505 YP_001275893.1 CDS RoseRS_1551 NC_009523.1 1896767 1898617 D PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1896767..1898617 Roseiflexus sp. RS-1 5208506 YP_001275894.1 CDS RoseRS_1552 NC_009523.1 1898972 1900018 D catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1898972..1900018 Roseiflexus sp. RS-1 5208507 YP_001275895.1 CDS RoseRS_1553 NC_009523.1 1900771 1901382 D PFAM: peptidase S14, ClpP; endopeptidase Clp 1900771..1901382 Roseiflexus sp. RS-1 5208508 YP_001275896.1 CDS RoseRS_1554 NC_009523.1 1901385 1902464 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1901385..1902464) Roseiflexus sp. RS-1 5208509 YP_001275897.1 CDS RoseRS_1555 NC_009523.1 1902941 1903720 D enoyl-(acyl-carrier-protein)-like protein 1902941..1903720 Roseiflexus sp. RS-1 5208510 YP_001275898.1 CDS RoseRS_1556 NC_009523.1 1903704 1904927 R PFAM: protein of unknown function UPF0118; hypothetical protein complement(1903704..1904927) Roseiflexus sp. RS-1 5208511 YP_001275899.1 CDS RoseRS_1557 NC_009523.1 1905229 1905492 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(1905229..1905492) Roseiflexus sp. RS-1 5208512 YP_001275900.1 CDS RoseRS_1558 NC_009523.1 1905557 1906369 R TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; septum site-determining protein MinD complement(1905557..1906369) Roseiflexus sp. RS-1 5208513 YP_001275901.1 CDS RoseRS_1559 NC_009523.1 1906430 1907089 R TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; septum site-determining protein MinC complement(1906430..1907089) Roseiflexus sp. RS-1 5208514 YP_001275902.1 CDS RoseRS_1560 NC_009523.1 1907306 1908463 R PFAM: aminotransferase, class I and II; class I/II aminotransferase complement(1907306..1908463) Roseiflexus sp. RS-1 5208515 YP_001275903.1 CDS RoseRS_1561 NC_009523.1 1908562 1909797 D TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1908562..1909797 Roseiflexus sp. RS-1 5208516 YP_001275904.1 CDS RoseRS_1562 NC_009523.1 1909915 1911027 D PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase 1909915..1911027 Roseiflexus sp. RS-1 5208517 YP_001275905.1 CDS RoseRS_1563 NC_009523.1 1911049 1912158 D PFAM: aminodeoxychorismate lyase; aminodeoxychorismate lyase 1911049..1912158 Roseiflexus sp. RS-1 5208518 YP_001275906.1 CDS RoseRS_1564 NC_009523.1 1912143 1912994 D TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; shikimate 5-dehydrogenase 1912143..1912994 Roseiflexus sp. RS-1 5208519 YP_001275907.1 CDS RoseRS_1565 NC_009523.1 1913006 1913770 D PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; peptidase A24A domain-containing protein 1913006..1913770 Roseiflexus sp. RS-1 5208520 YP_001275908.1 CDS RoseRS_1566 NC_009523.1 1913890 1917465 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 1913890..1917465 Roseiflexus sp. RS-1 5208521 YP_001275909.1 CDS RoseRS_1567 NC_009523.1 1917589 1918884 R hypothetical protein complement(1917589..1918884) Roseiflexus sp. RS-1 5208522 YP_001275910.1 CDS RoseRS_1568 NC_009523.1 1918900 1919139 R hypothetical protein complement(1918900..1919139) Roseiflexus sp. RS-1 5208523 YP_001275911.1 CDS RoseRS_1569 NC_009523.1 1919136 1920197 R hypothetical protein complement(1919136..1920197) Roseiflexus sp. RS-1 5208524 YP_001275912.1 CDS RoseRS_1570 NC_009523.1 1920273 1920920 R hypothetical protein complement(1920273..1920920) Roseiflexus sp. RS-1 5208525 YP_001275913.1 CDS RoseRS_1571 NC_009523.1 1921150 1921488 R hypothetical protein complement(1921150..1921488) Roseiflexus sp. RS-1 5208526 YP_001275914.1 CDS RoseRS_1572 NC_009523.1 1921592 1922839 D PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; major facilitator transporter 1921592..1922839 Roseiflexus sp. RS-1 5208527 YP_001275915.1 CDS RoseRS_1573 NC_009523.1 1922912 1923343 D hypothetical protein 1922912..1923343 Roseiflexus sp. RS-1 5208528 YP_001275916.1 CDS RoseRS_1574 NC_009523.1 1923367 1924434 R hypothetical protein complement(1923367..1924434) Roseiflexus sp. RS-1 5208529 YP_001275917.1 CDS RoseRS_1575 NC_009523.1 1924794 1926332 D amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 1924794..1926332 Roseiflexus sp. RS-1 5208530 YP_001275918.1 CDS RoseRS_1576 NC_009523.1 1926344 1928863 R PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, sugar binding; Beta-mannosidase complement(1926344..1928863) Roseiflexus sp. RS-1 5208531 YP_001275919.1 CDS RoseRS_1577 NC_009523.1 1928999 1929409 R hypothetical protein complement(1928999..1929409) Roseiflexus sp. RS-1 5208532 YP_001275920.1 CDS RoseRS_1578 NC_009523.1 1929592 1930314 D hypothetical protein 1929592..1930314 Roseiflexus sp. RS-1 5208533 YP_001275921.1 CDS RoseRS_1579 NC_009523.1 1930429 1932477 R PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; oligopeptidase B complement(1930429..1932477) Roseiflexus sp. RS-1 5208534 YP_001275922.1 CDS RoseRS_1580 NC_009523.1 1932595 1933524 R PFAM: PfkB domain protein; ribokinase-like domain-containing protein complement(1932595..1933524) Roseiflexus sp. RS-1 5208535 YP_001275923.1 CDS RoseRS_1581 NC_009523.1 1933948 1934772 D rhamnulose-1-phosphate aldolase 1933948..1934772 Roseiflexus sp. RS-1 5208536 YP_001275924.1 CDS RoseRS_1582 NC_009523.1 1934804 1935802 D RNA procession exonuclease-like protein 1934804..1935802 Roseiflexus sp. RS-1 5208537 YP_001275925.1 CDS RoseRS_1583 NC_009523.1 1935821 1937479 D PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; ATP dependent DNA ligase 1935821..1937479 Roseiflexus sp. RS-1 5208538 YP_001275926.1 CDS RoseRS_1584 NC_009523.1 1937476 1938372 D PFAM: histone deacetylase superfamily; histone deacetylase superfamily protein 1937476..1938372 Roseiflexus sp. RS-1 5208539 YP_001275927.1 CDS RoseRS_1585 NC_009523.1 1938480 1939688 R TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; phosphonate metabolism protein PhnM complement(1938480..1939688) Roseiflexus sp. RS-1 5208540 YP_001275928.1 CDS RoseRS_1586 NC_009523.1 1939692 1940384 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1939692..1940384) Roseiflexus sp. RS-1 5208541 YP_001275929.1 CDS RoseRS_1587 NC_009523.1 1940458 1941300 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1940458..1941300) Roseiflexus sp. RS-1 5208542 YP_001275930.1 CDS RoseRS_1588 NC_009523.1 1941297 1942163 R PFAM: phosphonate metabolism PhnJ; phosphonate metabolism PhnJ complement(1941297..1942163) Roseiflexus sp. RS-1 5208543 YP_001275931.1 CDS RoseRS_1589 NC_009523.1 1942160 1943329 R PFAM: phosphonate metabolism; phosphonate metabolism protein complement(1942160..1943329) Roseiflexus sp. RS-1 5208544 YP_001275932.1 CDS RoseRS_1590 NC_009523.1 1943342 1943974 R hypothetical protein complement(1943342..1943974) Roseiflexus sp. RS-1 5208545 YP_001275933.1 CDS RoseRS_1591 NC_009523.1 1943978 1944397 R hypothetical protein complement(1943978..1944397) Roseiflexus sp. RS-1 5208546 YP_001275934.1 CDS RoseRS_1592 NC_009523.1 1944418 1945248 R TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit complement(1944418..1945248) Roseiflexus sp. RS-1 5208547 YP_001275935.1 CDS RoseRS_1593 NC_009523.1 1945248 1946036 R TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit complement(1945248..1946036) Roseiflexus sp. RS-1 5208548 YP_001275936.1 CDS RoseRS_1594 NC_009523.1 1946026 1946811 R TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase complement(1946026..1946811) Roseiflexus sp. RS-1 5208549 YP_001275937.1 CDS RoseRS_1595 NC_009523.1 1946879 1947940 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein complement(1946879..1947940) Roseiflexus sp. RS-1 5208550 YP_001275938.1 CDS RoseRS_1596 NC_009523.1 1948201 1948977 R PFAM: RDD domain containing protein; RDD domain-containing protein complement(1948201..1948977) Roseiflexus sp. RS-1 5208551 YP_001275939.1 CDS RoseRS_1597 NC_009523.1 1949051 1950859 D PFAM: Allergen V5/Tpx-1 family protein; allergen V5/Tpx-1 family protein 1949051..1950859 Roseiflexus sp. RS-1 5208552 YP_001275940.1 CDS RoseRS_1598 NC_009523.1 1951580 1952833 R hypothetical protein complement(1951580..1952833) Roseiflexus sp. RS-1 5208553 YP_001275941.1 CDS RoseRS_1599 NC_009523.1 1953282 1953953 R PFAM: Phosphoglycerate mutase; phosphoglycerate mutase complement(1953282..1953953) Roseiflexus sp. RS-1 5208554 YP_001275942.1 CDS RoseRS_1600 NC_009523.1 1954300 1954869 R PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein complement(1954300..1954869) Roseiflexus sp. RS-1 5208555 YP_001275943.1 CDS RoseRS_1601 NC_009523.1 1955430 1957379 R hypothetical protein complement(1955430..1957379) Roseiflexus sp. RS-1 5208556 YP_001275944.1 CDS RoseRS_1602 NC_009523.1 1957382 1958242 R PFAM: SEC-C motif domain protein; SecC motif-containing protein complement(1957382..1958242) Roseiflexus sp. RS-1 5208557 YP_001275945.1 CDS RoseRS_1603 NC_009523.1 1958261 1959304 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(1958261..1959304) Roseiflexus sp. RS-1 5208558 YP_001275946.1 CDS RoseRS_1604 NC_009523.1 1959366 1960298 R PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; aminoglycoside/hydroxyurea antibiotic resistance kinase complement(1959366..1960298) Roseiflexus sp. RS-1 5208559 YP_001275947.1 CDS RoseRS_1605 NC_009523.1 1960298 1962805 R TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(1960298..1962805) Roseiflexus sp. RS-1 5208560 YP_001275948.1 CDS RoseRS_1606 NC_009523.1 1963329 1963586 D hypothetical protein 1963329..1963586 Roseiflexus sp. RS-1 5208561 YP_001275949.1 CDS RoseRS_1607 NC_009523.1 1963906 1965906 D hypothetical protein 1963906..1965906 Roseiflexus sp. RS-1 5208562 YP_001275950.1 CDS RoseRS_1608 NC_009523.1 1965918 1966751 D PFAM: LmbE family protein; LmbE family protein 1965918..1966751 Roseiflexus sp. RS-1 5208563 YP_001275951.1 CDS RoseRS_1609 NC_009523.1 1966699 1968339 R PFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein complement(1966699..1968339) Roseiflexus sp. RS-1 5208564 YP_001275952.1 CDS RoseRS_1610 NC_009523.1 1968494 1971388 D PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: Animal peptidoglycan recognition protein PGRP; N-acetylmuramoyl-L-alanine amidase 1968494..1971388 Roseiflexus sp. RS-1 5208565 YP_001275953.1 CDS RoseRS_1611 NC_009523.1 1971555 1972607 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; dTDP-glucose 4,6-dehydratase 1971555..1972607 Roseiflexus sp. RS-1 5208566 YP_001275954.1 CDS RoseRS_1612 NC_009523.1 1972707 1975379 R PFAM: FAD linked oxidase domain protein; D-lactate dehydrogenase complement(1972707..1975379) Roseiflexus sp. RS-1 5208567 YP_001275955.1 CDS RoseRS_1613 NC_009523.1 1975637 1976065 R PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase complement(1975637..1976065) Roseiflexus sp. RS-1 5208568 YP_001275956.1 CDS RoseRS_1614 NC_009523.1 1976213 1977220 D TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; transporter DMT superfamily protein 1976213..1977220 Roseiflexus sp. RS-1 5208569 YP_001275957.1 CDS RoseRS_1615 NC_009523.1 1977704 1980004 D TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; multi-sensor signal transduction histidine kinase 1977704..1980004 Roseiflexus sp. RS-1 5208570 YP_001275958.1 CDS RoseRS_1616 NC_009523.1 1980063 1981499 D hypothetical protein 1980063..1981499 Roseiflexus sp. RS-1 5208571 YP_001275959.1 CDS RoseRS_1617 NC_009523.1 1981527 1982939 D PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase 1981527..1982939 Roseiflexus sp. RS-1 5208572 YP_001275960.1 CDS RoseRS_1618 NC_009523.1 1983080 1985215 D TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 1983080..1985215 Roseiflexus sp. RS-1 5208573 YP_001275961.1 CDS RoseRS_1619 NC_009523.1 1985362 1988061 D TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 1985362..1988061 Roseiflexus sp. RS-1 5208574 YP_001275962.1 CDS RoseRS_1620 NC_009523.1 1988090 1989415 D hypothetical protein 1988090..1989415 Roseiflexus sp. RS-1 5208575 YP_001275963.1 CDS RoseRS_1621 NC_009523.1 1989773 1990465 D FHA domain-containing protein 1989773..1990465 Roseiflexus sp. RS-1 5208576 YP_001275964.1 CDS RoseRS_1622 NC_009523.1 1990530 1991501 D hypothetical protein 1990530..1991501 Roseiflexus sp. RS-1 5208577 YP_001275965.1 CDS RoseRS_1623 NC_009523.1 1991561 1994155 D helicase 1991561..1994155 Roseiflexus sp. RS-1 5208578 YP_001275966.1 CDS RoseRS_1624 NC_009523.1 1994394 1994657 D hypothetical protein 1994394..1994657 Roseiflexus sp. RS-1 5208579 YP_001275967.1 CDS RoseRS_1625 NC_009523.1 1994654 1994917 D hypothetical protein 1994654..1994917 Roseiflexus sp. RS-1 5208580 YP_001275968.1 CDS RoseRS_1626 NC_009523.1 1995016 1996101 D hypothetical protein 1995016..1996101 Roseiflexus sp. RS-1 5208581 YP_001275969.1 CDS RoseRS_1627 NC_009523.1 1996655 1997617 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(1996655..1997617) Roseiflexus sp. RS-1 5208582 YP_001275970.1 CDS RoseRS_1628 NC_009523.1 1998835 2001003 R PFAM: Na+/solute symporter; Na+/solute symporter complement(1998835..2001003) Roseiflexus sp. RS-1 5208583 YP_001275971.1 CDS RoseRS_1629 NC_009523.1 2001024 2001305 R hypothetical protein complement(2001024..2001305) Roseiflexus sp. RS-1 5208584 YP_001275972.1 CDS RoseRS_1630 NC_009523.1 2001708 2002964 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(2001708..2002964) Roseiflexus sp. RS-1 5208585 YP_001275973.1 CDS RoseRS_1631 NC_009523.1 2002964 2004007 R PFAM: WD40 domain protein beta Propeller; WD40 domain-containing protein complement(2002964..2004007) Roseiflexus sp. RS-1 5208586 YP_001275974.1 CDS RoseRS_1632 NC_009523.1 2004010 2005113 R PFAM: diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit complement(2004010..2005113) Roseiflexus sp. RS-1 5208587 YP_001275975.1 CDS RoseRS_1633 NC_009523.1 2005106 2005870 R PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; Helix-turn-helix, type 11 domain protein; two component LuxR family transcriptional regulator complement(2005106..2005870) Roseiflexus sp. RS-1 5208588 YP_001275976.1 CDS RoseRS_1634 NC_009523.1 2005849 2006571 R TIGRFAM: maf protein; PFAM: Maf family protein; maf protein complement(2005849..2006571) Roseiflexus sp. RS-1 5208589 YP_001275977.1 CDS RoseRS_1635 NC_009523.1 2006568 2007416 R PFAM: protein of unknown function DUF344; hypothetical protein complement(2006568..2007416) Roseiflexus sp. RS-1 5208590 YP_001275978.1 CDS RoseRS_1636 NC_009523.1 2007440 2008465 R PFAM: oxidoreductase domain protein; oxidoreductase domain-containing protein complement(2007440..2008465) Roseiflexus sp. RS-1 5208591 YP_001275979.1 CDS RoseRS_1637 NC_009523.1 2008487 2009707 R PFAM: PSP1 domain protein; PSP1 domain-containing protein complement(2008487..2009707) Roseiflexus sp. RS-1 5208592 YP_001275980.1 CDS RoseRS_1638 NC_009523.1 2009824 2011371 R PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; putative adenylate/guanylate cyclase complement(2009824..2011371) Roseiflexus sp. RS-1 5208593 YP_001275981.1 CDS RoseRS_1639 NC_009523.1 2011514 2012101 R TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: surface protein from Gram-positive cocci, anchor region; cell wall anchor domain-containing protein complement(2011514..2012101) Roseiflexus sp. RS-1 5208594 YP_001275982.1 CDS RoseRS_1640 NC_009523.1 2012122 2014425 R TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein, Chlamydia; polymorphic outer membrane protein complement(2012122..2014425) Roseiflexus sp. RS-1 5208595 YP_001275983.1 CDS RoseRS_1641 NC_009523.1 2014894 2016012 D TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 2014894..2016012 Roseiflexus sp. RS-1 5208596 YP_001275984.1 CDS RoseRS_1642 NC_009523.1 2016034 2016942 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2016034..2016942 Roseiflexus sp. RS-1 5208597 YP_001275985.1 CDS RoseRS_1643 NC_009523.1 2017052 2018014 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(2017052..2018014) Roseiflexus sp. RS-1 5208598 YP_001275986.1 CDS RoseRS_1644 NC_009523.1 2018271 2019128 D PFAM: binding-protein-dependent transport systems inner membrane component; ornithine carbamoyltransferase 2018271..2019128 Roseiflexus sp. RS-1 5208599 YP_001275987.1 CDS RoseRS_1645 NC_009523.1 2019189 2020379 D PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 2019189..2020379 Roseiflexus sp. RS-1 5208600 YP_001275988.1 CDS RoseRS_1646 NC_009523.1 2020881 2021750 D PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein 2020881..2021750 Roseiflexus sp. RS-1 5208603 YP_001275989.1 CDS RoseRS_1647 NC_009523.1 2021771 2022064 D PFAM: regulatory protein, MerR; MerR family transcriptional regulator 2021771..2022064 Roseiflexus sp. RS-1 5208604 YP_001275990.1 CDS RoseRS_1648 NC_009523.1 2022141 2022560 D PFAM: RbsD or FucU transport; transport protein RbsD/FucU 2022141..2022560 Roseiflexus sp. RS-1 5208605 YP_001275991.1 CDS RoseRS_1649 NC_009523.1 2022573 2024141 R hypothetical protein complement(2022573..2024141) Roseiflexus sp. RS-1 5208606 YP_001275992.1 CDS RoseRS_1650 NC_009523.1 2024426 2025004 D hypothetical protein 2024426..2025004 Roseiflexus sp. RS-1 5208607 YP_001275993.1 CDS RoseRS_1651 NC_009523.1 2025027 2026988 D PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; ATPase central domain-containing protein 2025027..2026988 Roseiflexus sp. RS-1 5208608 YP_001275994.1 CDS RoseRS_1652 NC_009523.1 2027359 2029011 D hypothetical protein 2027359..2029011 Roseiflexus sp. RS-1 5208609 YP_001275995.1 CDS RoseRS_1653 NC_009523.1 2029048 2029872 D hypothetical protein 2029048..2029872 Roseiflexus sp. RS-1 5208610 YP_001275996.1 CDS RoseRS_1654 NC_009523.1 2030058 2032982 D PFAM: Peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 2030058..2032982 Roseiflexus sp. RS-1 5208611 YP_001275997.1 CDS RoseRS_1655 NC_009523.1 2033008 2033424 D hypothetical protein 2033008..2033424 Roseiflexus sp. RS-1 5208612 YP_001275998.1 CDS RoseRS_1656 NC_009523.1 2033431 2034393 D hypothetical protein 2033431..2034393 Roseiflexus sp. RS-1 5208613 YP_001275999.1 CDS RoseRS_1657 NC_009523.1 2034406 2035971 D PFAM: phage tail sheath protein; phage tail sheath protein 2034406..2035971 Roseiflexus sp. RS-1 5208614 YP_001276000.1 CDS RoseRS_1658 NC_009523.1 2036037 2036477 D TIGRFAM: conserved hypothetical phage tail protein; phage tail protein 2036037..2036477 Roseiflexus sp. RS-1 5208615 YP_001276001.1 CDS RoseRS_1659 NC_009523.1 2036661 2037029 D hypothetical protein 2036661..2037029 Roseiflexus sp. RS-1 5208616 YP_001276002.1 CDS RoseRS_1660 NC_009523.1 2037233 2037661 D TIGRFAM: conserved hypothetical phage tail protein; phage tail protein 2037233..2037661 Roseiflexus sp. RS-1 5208617 YP_001276003.1 CDS RoseRS_1661 NC_009523.1 2037666 2040590 D hypothetical protein 2037666..2040590 Roseiflexus sp. RS-1 5208618 YP_001276004.1 CDS RoseRS_1662 NC_009523.1 2040603 2041280 D hypothetical protein 2040603..2041280 Roseiflexus sp. RS-1 5208619 YP_001276005.1 CDS RoseRS_1663 NC_009523.1 2041273 2043042 D PFAM: Rhs element Vgr protein; Rhs element Vgr protein 2041273..2043042 Roseiflexus sp. RS-1 5208620 YP_001276006.1 CDS RoseRS_1664 NC_009523.1 2043056 2043346 D PFAM: PAAR repeat-containing protein; PAAR repeat-containing protein 2043056..2043346 Roseiflexus sp. RS-1 5208621 YP_001276007.1 CDS RoseRS_1665 NC_009523.1 2043353 2043745 D PFAM: GPW/gp25 family protein; GPW/gp25 family protein 2043353..2043745 Roseiflexus sp. RS-1 5208622 YP_001276008.1 CDS RoseRS_1666 NC_009523.1 2043758 2045788 D hypothetical protein 2043758..2045788 Roseiflexus sp. RS-1 5208623 YP_001276009.1 CDS RoseRS_1667 NC_009523.1 2045952 2046992 D TIGRFAM: phage tail protein; PFAM: Forkhead-associated protein; FHA domain-containing protein 2045952..2046992 Roseiflexus sp. RS-1 5208624 YP_001276010.1 CDS RoseRS_1668 NC_009523.1 2046985 2048592 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase 2046985..2048592 Roseiflexus sp. RS-1 5208625 YP_001276011.1 CDS RoseRS_1669 NC_009523.1 2048872 2052033 D PFAM: Forkhead-associated protein; protein kinase; tyrosine protein kinase; SMART: serine/threonine protein kinase; protein kinase 2048872..2052033 Roseiflexus sp. RS-1 5208626 YP_001276012.1 CDS RoseRS_1670 NC_009523.1 2052097 2055318 D PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 2052097..2055318 Roseiflexus sp. RS-1 5208627 YP_001276013.1 CDS RoseRS_1671 NC_009523.1 2055322 2057175 D PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 2055322..2057175 Roseiflexus sp. RS-1 5208628 YP_001276014.1 CDS RoseRS_1672 NC_009523.1 2057226 2059910 D PFAM: Forkhead-associated protein; Na-Ca exchanger/integrin-beta4; forkhead-associated protein 2057226..2059910 Roseiflexus sp. RS-1 5208629 YP_001276015.1 CDS RoseRS_1673 NC_009523.1 2059946 2064232 D PFAM: Forkhead-associated protein; FHA domain-containing protein 2059946..2064232 Roseiflexus sp. RS-1 5208630 YP_001276016.1 CDS RoseRS_1674 NC_009523.1 2064287 2067790 D PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 2064287..2067790 Roseiflexus sp. RS-1 5208631 YP_001276017.1 CDS RoseRS_1675 NC_009523.1 2067794 2069098 R PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; dehydrogenase catalytic domain-containing protein complement(2067794..2069098) Roseiflexus sp. RS-1 5208632 YP_001276018.1 CDS RoseRS_1676 NC_009523.1 2069217 2069552 R hypothetical protein complement(2069217..2069552) Roseiflexus sp. RS-1 5208633 YP_001276019.1 CDS RoseRS_1678 NC_009523.1 2070056 2070430 R hypothetical protein complement(2070056..2070430) Roseiflexus sp. RS-1 5208635 YP_001276020.1 CDS RoseRS_1679 NC_009523.1 2070659 2071180 R hypothetical protein complement(2070659..2071180) Roseiflexus sp. RS-1 5208636 YP_001276021.1 CDS RoseRS_1680 NC_009523.1 2071462 2071812 R hypothetical protein complement(2071462..2071812) Roseiflexus sp. RS-1 5208637 YP_001276022.1 CDS RoseRS_1681 NC_009523.1 2071947 2072996 R hypothetical protein complement(2071947..2072996) Roseiflexus sp. RS-1 5208638 YP_001276023.1 CDS RoseRS_1682 NC_009523.1 2073012 2074436 R TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; YD repeat-containing protein complement(2073012..2074436) Roseiflexus sp. RS-1 5208639 YP_001276024.1 CDS RoseRS_1683 NC_009523.1 2074610 2075053 D hypothetical protein 2074610..2075053 Roseiflexus sp. RS-1 5208640 YP_001276025.1 CDS RoseRS_1684 NC_009523.1 2075047 2075298 D hypothetical protein 2075047..2075298 Roseiflexus sp. RS-1 5208641 YP_001276026.1 CDS RoseRS_1686 NC_009523.1 2075771 2076430 R hypothetical protein complement(2075771..2076430) Roseiflexus sp. RS-1 5208643 YP_001276027.1 CDS RoseRS_1687 NC_009523.1 2076459 2076965 R hypothetical protein complement(2076459..2076965) Roseiflexus sp. RS-1 5208644 YP_001276028.1 CDS RoseRS_1688 NC_009523.1 2077337 2077759 R hypothetical protein complement(2077337..2077759) Roseiflexus sp. RS-1 5208645 YP_001276029.1 CDS RoseRS_1689 NC_009523.1 2077908 2079356 R PFAM: YD repeat-containing protein; YD repeat-/RHS repeat-containing protein complement(2077908..2079356) Roseiflexus sp. RS-1 5208646 YP_001276030.1 CDS RoseRS_1690 NC_009523.1 2079530 2079973 D hypothetical protein 2079530..2079973 Roseiflexus sp. RS-1 5208647 YP_001276031.1 CDS RoseRS_1691 NC_009523.1 2079967 2080218 D hypothetical protein 2079967..2080218 Roseiflexus sp. RS-1 5208648 YP_001276032.1 CDS RoseRS_1692 NC_009523.1 2080718 2082712 R PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase complement(2080718..2082712) Roseiflexus sp. RS-1 5208649 YP_001276033.1 CDS RoseRS_1693 NC_009523.1 2083068 2083559 R hypothetical protein complement(2083068..2083559) Roseiflexus sp. RS-1 5208650 YP_001276034.1 CDS RoseRS_1694 NC_009523.1 2083741 2084682 R UV damage repair endonuclease-like protein complement(2083741..2084682) Roseiflexus sp. RS-1 5208651 YP_001276035.1 CDS RoseRS_1695 NC_009523.1 2084800 2086320 D TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; glutamyl-tRNA synthetase 2084800..2086320 Roseiflexus sp. RS-1 5208652 YP_001276036.1 CDS RoseRS_1696 NC_009523.1 2086311 2086868 R PFAM: Forkhead-associated protein; FHA domain-containing protein complement(2086311..2086868) Roseiflexus sp. RS-1 5208653 YP_001276037.1 CDS RoseRS_1697 NC_009523.1 2087183 2088424 D PFAM: CBS domain containing protein; protein of unknown function DUF190; hypothetical protein 2087183..2088424 Roseiflexus sp. RS-1 5208654 YP_001276038.1 CDS RoseRS_1698 NC_009523.1 2088441 2089490 R PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(2088441..2089490) Roseiflexus sp. RS-1 5208655 YP_001276039.1 CDS RoseRS_1699 NC_009523.1 2089716 2090357 R PFAM: Phosphoglycerate mutase; phosphoglycerate mutase complement(2089716..2090357) Roseiflexus sp. RS-1 5208656 YP_001276040.1 CDS RoseRS_1700 NC_009523.1 2090464 2091390 D PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 2090464..2091390 Roseiflexus sp. RS-1 5208657 YP_001276041.1 CDS RoseRS_1701 NC_009523.1 2091427 2093046 R PFAM: protein of unknown function DUF87; hypothetical protein complement(2091427..2093046) Roseiflexus sp. RS-1 5208658 YP_001276042.1 CDS RoseRS_1702 NC_009523.1 2093415 2097953 D hypothetical protein 2093415..2097953 Roseiflexus sp. RS-1 5208659 YP_001276043.1 CDS RoseRS_1703 NC_009523.1 2098053 2099240 D hypothetical protein 2098053..2099240 Roseiflexus sp. RS-1 5208660 YP_001276044.1 CDS RoseRS_1704 NC_009523.1 2099295 2100404 R PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M20 complement(2099295..2100404) Roseiflexus sp. RS-1 5208661 YP_001276045.1 CDS RoseRS_1705 NC_009523.1 2100545 2101363 R hypothetical protein complement(2100545..2101363) Roseiflexus sp. RS-1 5208662 YP_001276046.1 CDS RoseRS_1706 NC_009523.1 2101510 2101902 D TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein; methylglyoxal synthase 2101510..2101902 Roseiflexus sp. RS-1 5208663 YP_001276047.1 CDS RoseRS_1707 NC_009523.1 2102090 2103148 R PFAM: permease; permease complement(2102090..2103148) Roseiflexus sp. RS-1 5208664 YP_001276048.1 CDS RoseRS_1708 NC_009523.1 2103270 2103509 R TIGRFAM: redox-active disulfide protein 2; redox-active disulfide protein 2 complement(2103270..2103509) Roseiflexus sp. RS-1 5208665 YP_001276049.1 CDS RoseRS_1709 NC_009523.1 2103524 2103928 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(2103524..2103928) Roseiflexus sp. RS-1 5208666 YP_001276050.1 CDS RoseRS_1710 NC_009523.1 2104090 2105064 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(2104090..2105064) Roseiflexus sp. RS-1 5208667 YP_001276051.1 CDS RoseRS_1711 NC_009523.1 2105061 2105756 R hypothetical protein complement(2105061..2105756) Roseiflexus sp. RS-1 5208668 YP_001276052.1 CDS RoseRS_1712 NC_009523.1 2105753 2107198 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase complement(2105753..2107198) Roseiflexus sp. RS-1 5208669 YP_001276053.1 CDS RoseRS_1713 NC_009523.1 2107210 2107881 R PFAM: protein of unknown function DUF820; hypothetical protein complement(2107210..2107881) Roseiflexus sp. RS-1 5208670 YP_001276054.1 CDS RoseRS_1714 NC_009523.1 2107890 2109476 R TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator complement(2107890..2109476) Roseiflexus sp. RS-1 5208671 YP_001276055.1 CDS RoseRS_1715 NC_009523.1 2109790 2110383 D PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 2109790..2110383 Roseiflexus sp. RS-1 5208672 YP_001276056.1 CDS RoseRS_1716 NC_009523.1 2110547 2112490 R PFAM: protein of unknown function DUF839; hypothetical protein complement(2110547..2112490) Roseiflexus sp. RS-1 5208673 YP_001276057.1 CDS RoseRS_1717 NC_009523.1 2112655 2113041 R hypothetical protein complement(2112655..2113041) Roseiflexus sp. RS-1 5208674 YP_001276058.1 CDS RoseRS_1718 NC_009523.1 2113038 2115521 R hypothetical protein complement(2113038..2115521) Roseiflexus sp. RS-1 5208675 YP_001276059.1 CDS RoseRS_1719 NC_009523.1 2115565 2116737 R PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(2115565..2116737) Roseiflexus sp. RS-1 5208676 YP_001276060.1 CDS RoseRS_1720 NC_009523.1 2116827 2117960 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(2116827..2117960) Roseiflexus sp. RS-1 5208677 YP_001276061.1 CDS RoseRS_1721 NC_009523.1 2117977 2118612 R TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase complement(2117977..2118612) Roseiflexus sp. RS-1 5208678 YP_001276062.1 CDS RoseRS_1722 NC_009523.1 2118856 2120109 D PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase 2118856..2120109 Roseiflexus sp. RS-1 5208679 YP_001276063.1 CDS RoseRS_1723 NC_009523.1 2120116 2120487 D PFAM: protein of unknown function UPF0102; hypothetical protein 2120116..2120487 Roseiflexus sp. RS-1 5208680 YP_001276064.1 CDS RoseRS_1724 NC_009523.1 2120544 2121092 D PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 2120544..2121092 Roseiflexus sp. RS-1 5208681 YP_001276065.1 CDS RoseRS_1725 NC_009523.1 2121089 2121556 D PFAM: CBS domain containing protein; signal-transduction protein 2121089..2121556 Roseiflexus sp. RS-1 5208682 YP_001276066.1 CDS RoseRS_1726 NC_009523.1 2121625 2123004 R PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; dihydrolipoyllysine-residue succinyltransferase complement(2121625..2123004) Roseiflexus sp. RS-1 5208683 YP_001276067.1 CDS RoseRS_1727 NC_009523.1 2123016 2123984 R PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region complement(2123016..2123984) Roseiflexus sp. RS-1 5208684 YP_001276068.1 CDS RoseRS_1728 NC_009523.1 2123988 2125040 R PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase complement(2123988..2125040) Roseiflexus sp. RS-1 5208685 YP_001276069.1 CDS RoseRS_1729 NC_009523.1 2125284 2126243 R hypothetical protein complement(2125284..2126243) Roseiflexus sp. RS-1 5208686 YP_001276070.1 CDS RoseRS_1730 NC_009523.1 2126389 2127600 D PFAM: RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 2126389..2127600 Roseiflexus sp. RS-1 5208687 YP_001276071.1 CDS RoseRS_1731 NC_009523.1 2127680 2130217 D PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 2127680..2130217 Roseiflexus sp. RS-1 5208688 YP_001276072.1 CDS RoseRS_1732 NC_009523.1 2130479 2131867 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2130479..2131867 Roseiflexus sp. RS-1 5208689 YP_001276073.1 CDS RoseRS_1733 NC_009523.1 2131900 2132985 D PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; PilT domain-containing protein 2131900..2132985 Roseiflexus sp. RS-1 5208690 YP_001276074.1 CDS RoseRS_1734 NC_009523.1 2133112 2135832 D PFAM: SMC domain protein; SMC domain-containing protein 2133112..2135832 Roseiflexus sp. RS-1 5208691 YP_001276075.1 CDS RoseRS_1735 NC_009523.1 2135835 2137025 D PFAM: AAA-4 family protein; putative transcriptional regulator 2135835..2137025 Roseiflexus sp. RS-1 5208692 YP_001276076.1 CDS RoseRS_1736 NC_009523.1 2137994 2142310 D PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: Armadillo domain protein; HEAT repeat-containing PBS lyase 2137994..2142310 Roseiflexus sp. RS-1 5208693 YP_001276077.1 CDS RoseRS_1737 NC_009523.1 2142396 2143358 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(2142396..2143358) Roseiflexus sp. RS-1 5208694 YP_001276078.1 CDS RoseRS_1738 NC_009523.1 2144345 2145742 D PFAM: aminotransferase class-III; class III aminotransferase 2144345..2145742 Roseiflexus sp. RS-1 5208695 YP_001276079.1 CDS RoseRS_1739 NC_009523.1 2145747 2146250 R hypothetical protein complement(2145747..2146250) Roseiflexus sp. RS-1 5208696 YP_001276080.1 CDS RoseRS_1740 NC_009523.1 2146413 2148632 D PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase family protein 2146413..2148632 Roseiflexus sp. RS-1 5208697 YP_001276081.1 CDS RoseRS_1741 NC_009523.1 2148601 2149788 D TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2148601..2149788 Roseiflexus sp. RS-1 5208698 YP_001276082.1 CDS RoseRS_1742 NC_009523.1 2150698 2151279 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; PfpI family intracellular peptidase complement(2150698..2151279) Roseiflexus sp. RS-1 5208699 YP_001276083.1 CDS RoseRS_1743 NC_009523.1 2151561 2155715 R PFAM: Cna B domain protein; Cna B domain-containing protein complement(2151561..2155715) Roseiflexus sp. RS-1 5208700 YP_001276084.1 CDS RoseRS_1744 NC_009523.1 2156637 2158103 D TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; protoporphyrinogen oxidase 2156637..2158103 Roseiflexus sp. RS-1 5208701 YP_001276085.1 CDS RoseRS_1745 NC_009523.1 2158151 2158768 D TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; DNA binding domain-containing protein 2158151..2158768 Roseiflexus sp. RS-1 5208702 YP_001276086.1 CDS hemA NC_009523.1 2158784 2160061 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2158784..2160061 Roseiflexus sp. RS-1 5208703 YP_001276087.1 CDS RoseRS_1747 NC_009523.1 2160091 2160792 D PFAM: Chlorite dismutase; chlorite dismutase 2160091..2160792 Roseiflexus sp. RS-1 5208704 YP_001276088.1 CDS RoseRS_1748 NC_009523.1 2160797 2161843 D TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 2160797..2161843 Roseiflexus sp. RS-1 5208705 YP_001276089.1 CDS RoseRS_1749 NC_009523.1 2161847 2162788 D PFAM: ferrochelatase; ferrochelatase 2161847..2162788 Roseiflexus sp. RS-1 5208706 YP_001276090.1 CDS hemC NC_009523.1 2162785 2163696 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2162785..2163696 Roseiflexus sp. RS-1 5208707 YP_001276091.1 CDS RoseRS_1751 NC_009523.1 2163706 2164488 D PFAM: Uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 2163706..2164488 Roseiflexus sp. RS-1 5208708 YP_001276092.1 CDS RoseRS_1752 NC_009523.1 2164507 2165490 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2164507..2165490 Roseiflexus sp. RS-1 5208709 YP_001276093.1 CDS RoseRS_1753 NC_009523.1 2166667 2167950 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2166667..2167950 Roseiflexus sp. RS-1 5208710 YP_001276094.1 CDS RoseRS_1754 NC_009523.1 2168183 2169436 R hypothetical protein complement(2168183..2169436) Roseiflexus sp. RS-1 5208711 YP_001276095.1 CDS RoseRS_1755 NC_009523.1 2169814 2170824 D hypothetical protein 2169814..2170824 Roseiflexus sp. RS-1 5208712 YP_001276096.1 CDS RoseRS_1756 NC_009523.1 2172287 2173112 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(join(2172287..2172712,2172714..2173112)) Roseiflexus sp. RS-1 5208713 YP_001276097.1 CDS RoseRS_1757 NC_009523.1 2173349 2173717 R hypothetical protein complement(2173349..2173717) Roseiflexus sp. RS-1 5208714 YP_001276098.1 CDS RoseRS_1758 NC_009523.1 2174373 2175659 D TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; O-acetylhomoserine/O-acetylserine sulfhydrylase 2174373..2175659 Roseiflexus sp. RS-1 5208715 YP_001276099.1 CDS RoseRS_1759 NC_009523.1 2175847 2176992 D TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 2175847..2176992 Roseiflexus sp. RS-1 5208716 YP_001276100.1 CDS RoseRS_1760 NC_009523.1 2177163 2177780 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 2177163..2177780 Roseiflexus sp. RS-1 5208717 YP_001276101.1 CDS RoseRS_1761 NC_009523.1 2177780 2178736 D putative transmembrane anti-sigma factor 2177780..2178736 Roseiflexus sp. RS-1 5208718 YP_001276102.1 CDS RoseRS_1762 NC_009523.1 2179082 2179888 R PFAM: protein of unknown function DUF574; hypothetical protein complement(2179082..2179888) Roseiflexus sp. RS-1 5208719 YP_001276103.1 CDS RoseRS_1763 NC_009523.1 2180078 2180407 R hypothetical protein complement(2180078..2180407) Roseiflexus sp. RS-1 5208720 YP_001276104.1 CDS RoseRS_1764 NC_009523.1 2180518 2181343 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(join(2180518..2180943,2180945..2181343)) Roseiflexus sp. RS-1 5208721 YP_001276105.1 CDS RoseRS_1765 NC_009523.1 2181382 2182116 D TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; MIP family channel protein 2181382..2182116 Roseiflexus sp. RS-1 5208722 YP_001276106.1 CDS RoseRS_1766 NC_009523.1 2182217 2183218 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2182217..2183218 Roseiflexus sp. RS-1 5208723 YP_001276107.1 CDS RoseRS_1767 NC_009523.1 2183222 2183857 D TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; dihydroxyacetone kinase subunit L 2183222..2183857 Roseiflexus sp. RS-1 5208724 YP_001276108.1 CDS RoseRS_1768 NC_009523.1 2183897 2185393 D TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; glycerol kinase 2183897..2185393 Roseiflexus sp. RS-1 5208725 YP_001276109.1 CDS RoseRS_1769 NC_009523.1 2185547 2186149 D hypothetical protein 2185547..2186149 Roseiflexus sp. RS-1 5208726 YP_001276110.1 CDS RoseRS_1770 NC_009523.1 2186121 2188643 D TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; dihydroxyacetone kinase, phosphotransfer subunit; PFAM: phosphocarrier HPr protein; PEP-utilizing enzyme; PTS system fructose subfamily IIA component; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; phosphoenolpyruvate-protein phosphotransferase 2186121..2188643 Roseiflexus sp. RS-1 5208727 YP_001276111.1 CDS RoseRS_1771 NC_009523.1 2188736 2189152 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(2188736..2189152) Roseiflexus sp. RS-1 5208728 YP_001276112.1 CDS RoseRS_1772 NC_009523.1 2189353 2190048 R hypothetical protein complement(2189353..2190048) Roseiflexus sp. RS-1 5208729 YP_001276113.1 CDS RoseRS_1773 NC_009523.1 2190446 2191045 R PFAM: Disulphide bond formation protein DsbB; disulfide bond formation protein DsbB complement(2190446..2191045) Roseiflexus sp. RS-1 5208732 YP_001276114.1 CDS RoseRS_1774 NC_009523.1 2191162 2191773 D TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15, pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase 2191162..2191773 Roseiflexus sp. RS-1 5208733 YP_001276115.1 CDS RoseRS_1775 NC_009523.1 2192500 2193942 R TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; aminoacyl-transfer RNA synthetase, class II; prolyl-tRNA synthetase complement(2192500..2193942) Roseiflexus sp. RS-1 5208734 YP_001276116.1 CDS RoseRS_1776 NC_009523.1 2194144 2194932 R hypothetical protein complement(2194144..2194932) Roseiflexus sp. RS-1 5208735 YP_001276117.1 CDS RoseRS_1777 NC_009523.1 2194986 2195678 R PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(2194986..2195678) Roseiflexus sp. RS-1 5208736 YP_001276118.1 CDS RoseRS_1778 NC_009523.1 2195829 2197253 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 2195829..2197253 Roseiflexus sp. RS-1 5208737 YP_001276119.1 CDS RoseRS_1779 NC_009523.1 2197365 2197832 D hypothetical protein 2197365..2197832 Roseiflexus sp. RS-1 5208738 YP_001276120.1 CDS RoseRS_1780 NC_009523.1 2197919 2198383 R PFAM: Forkhead-associated protein; FHA domain-containing protein complement(2197919..2198383) Roseiflexus sp. RS-1 5208739 YP_001276121.1 CDS RoseRS_1781 NC_009523.1 2198419 2199144 R PFAM: Forkhead-associated protein; FHA domain-containing protein complement(2198419..2199144) Roseiflexus sp. RS-1 5208740 YP_001276122.1 CDS RoseRS_1782 NC_009523.1 2199250 2200194 R dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein complement(2199250..2200194) Roseiflexus sp. RS-1 5208741 YP_001276123.1 CDS RoseRS_1783 NC_009523.1 2200312 2202036 R transposase complement(2200312..2202036) Roseiflexus sp. RS-1 5208742 YP_001276124.1 CDS RoseRS_1784 NC_009523.1 2202532 2205528 D hypothetical protein 2202532..2205528 Roseiflexus sp. RS-1 5208743 YP_001276125.1 CDS RoseRS_1785 NC_009523.1 2205644 2206636 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(2205644..2206636) Roseiflexus sp. RS-1 5208744 YP_001276126.1 CDS RoseRS_1786 NC_009523.1 2206959 2208347 D PFAM: alpha/beta hydrolase fold; cyclic nucleotide-binding; cyclic nucleotide-binding protein 2206959..2208347 Roseiflexus sp. RS-1 5208745 YP_001276127.1 CDS RoseRS_1787 NC_009523.1 2208436 2208642 D PFAM: protein of unknown function UPF0150; hypothetical protein 2208436..2208642 Roseiflexus sp. RS-1 5208746 YP_001276128.1 CDS RoseRS_1788 NC_009523.1 2208639 2208851 D hypothetical protein 2208639..2208851 Roseiflexus sp. RS-1 5208747 YP_001276129.1 CDS RoseRS_1789 NC_009523.1 2209059 2210237 D PFAM: peptidase M24; peptidase M24 2209059..2210237 Roseiflexus sp. RS-1 5208748 YP_001276130.1 CDS RoseRS_1790 NC_009523.1 2210424 2212454 R PFAM: Amylo-alpha-1,6-glucosidase; amylo-alpha-1,6-glucosidase complement(2210424..2212454) Roseiflexus sp. RS-1 5208749 YP_001276131.1 CDS RoseRS_1791 NC_009523.1 2212485 2213357 R PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(2212485..2213357) Roseiflexus sp. RS-1 5208750 YP_001276132.1 CDS RoseRS_1792 NC_009523.1 2213532 2215229 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Polysulphide reductase, NrfD; 4Fe-4S ferredoxin 2213532..2215229 Roseiflexus sp. RS-1 5208751 YP_001276133.1 CDS RoseRS_1793 NC_009523.1 2215273 2218317 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; formate dehydrogenase 2215273..2218317 Roseiflexus sp. RS-1 5208752 YP_001276134.1 CDS RoseRS_1794 NC_009523.1 2218466 2219509 D hypothetical protein 2218466..2219509 Roseiflexus sp. RS-1 5208753 YP_001276135.1 CDS RoseRS_1795 NC_009523.1 2219555 2220175 D PFAM: formylmethanofuran dehydrogenase, subunit E region; formylmethanofuran dehydrogenase subunit E 2219555..2220175 Roseiflexus sp. RS-1 5208754 YP_001276136.1 CDS RoseRS_1796 NC_009523.1 2220144 2221325 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein complement(2220144..2221325) Roseiflexus sp. RS-1 5208755 YP_001276137.1 CDS RoseRS_1797 NC_009523.1 2221322 2221999 R TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit complement(2221322..2221999) Roseiflexus sp. RS-1 5208756 YP_001276138.1 CDS RoseRS_1798 NC_009523.1 2221996 2222802 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; molybdenum ABC transporter periplasmic molybdate-binding protein complement(2221996..2222802) Roseiflexus sp. RS-1 5208757 YP_001276139.1 CDS RoseRS_1799 NC_009523.1 2222925 2224241 R hypothetical protein complement(2222925..2224241) Roseiflexus sp. RS-1 5208758 YP_001276140.1 CDS RoseRS_1800 NC_009523.1 2224525 2225199 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(2224525..2225199) Roseiflexus sp. RS-1 5208759 YP_001276141.1 CDS RoseRS_1801 NC_009523.1 2225230 2225982 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2225230..2225982) Roseiflexus sp. RS-1 5208760 YP_001276142.1 CDS RoseRS_1802 NC_009523.1 2226014 2226664 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(2226014..2226664) Roseiflexus sp. RS-1 5208761 YP_001276143.1 CDS RoseRS_1803 NC_009523.1 2226671 2227537 R PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; extracellular solute-binding protein complement(2226671..2227537) Roseiflexus sp. RS-1 5208762 YP_001276144.1 CDS RoseRS_1804 NC_009523.1 2228169 2229512 R hypothetical protein complement(2228169..2229512) Roseiflexus sp. RS-1 5208763 YP_001276145.1 CDS RoseRS_1805 NC_009523.1 2229648 2230812 D hypothetical protein join(2229648..2229914,2229916..2230812) Roseiflexus sp. RS-1 5208764 YP_001276146.1 CDS RoseRS_1806 NC_009523.1 2231044 2231583 R PFAM: phosphotransferase KptA/Tpt1; phosphate acetyltransferase complement(2231044..2231583) Roseiflexus sp. RS-1 5208765 YP_001276147.1 CDS RoseRS_1807 NC_009523.1 2231840 2232589 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 2231840..2232589 Roseiflexus sp. RS-1 5208766 YP_001276148.1 CDS RoseRS_1808 NC_009523.1 2232857 2233682 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein join(2232857..2233255,2233257..2233682) Roseiflexus sp. RS-1 5208767 YP_001276149.1 CDS RoseRS_1809 NC_009523.1 2233744 2234667 R hypothetical protein complement(2233744..2234667) Roseiflexus sp. RS-1 5208768 YP_001276150.1 CDS RoseRS_1810 NC_009523.1 2234877 2235503 D hypothetical protein 2234877..2235503 Roseiflexus sp. RS-1 5208769 YP_001276151.1 CDS RoseRS_1811 NC_009523.1 2235558 2237066 R TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; FAD dependent oxidoreductase; phytoene dehydrogenase-like protein complement(2235558..2237066) Roseiflexus sp. RS-1 5208770 YP_001276152.1 CDS RoseRS_1812 NC_009523.1 2237300 2238844 D glycosyltransferase 2237300..2238844 Roseiflexus sp. RS-1 5208771 YP_001276153.1 CDS RoseRS_1813 NC_009523.1 2239292 2240155 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2239292..2240155) Roseiflexus sp. RS-1 5208772 YP_001276154.1 CDS RoseRS_1814 NC_009523.1 2240422 2241063 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2240422..2241063) Roseiflexus sp. RS-1 5208773 YP_001276155.1 CDS RoseRS_1815 NC_009523.1 2241047 2242027 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2241047..2242027) Roseiflexus sp. RS-1 5208774 YP_001276156.1 CDS RoseRS_1816 NC_009523.1 2242032 2242964 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(2242032..2242964) Roseiflexus sp. RS-1 5208775 YP_001276157.1 CDS RoseRS_1817 NC_009523.1 2243013 2243666 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2243013..2243666) Roseiflexus sp. RS-1 5208776 YP_001276158.1 CDS RoseRS_1818 NC_009523.1 2243674 2244555 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(2243674..2244555) Roseiflexus sp. RS-1 5208777 YP_001276159.1 CDS RoseRS_1819 NC_009523.1 2244593 2246308 R TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type complement(2244593..2246308) Roseiflexus sp. RS-1 5208778 YP_001276160.1 CDS RoseRS_1820 NC_009523.1 2246302 2247429 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(2246302..2247429) Roseiflexus sp. RS-1 5208779 YP_001276161.1 CDS RoseRS_1821 NC_009523.1 2247426 2247923 R TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(2247426..2247923) Roseiflexus sp. RS-1 5208780 YP_001276162.1 CDS RoseRS_1822 NC_009523.1 2247945 2248682 R PFAM: glutamine amidotransferase class-I; peptidase C26; peptidase C26 complement(2247945..2248682) Roseiflexus sp. RS-1 5208781 YP_001276163.1 CDS RoseRS_1823 NC_009523.1 2249237 2251828 R PFAM: Forkhead-associated protein; XYPPX repeat-containing protein; FHA domain-containing protein complement(2249237..2251828) Roseiflexus sp. RS-1 5208782 YP_001276164.1 CDS RoseRS_1825 NC_009523.1 2253352 2254083 R PFAM: alpha/beta hydrolase fold; Thioesterase; alpha/beta hydrolase fold protein complement(2253352..2254083) Roseiflexus sp. RS-1 5208784 YP_001276165.1 CDS RoseRS_1826 NC_009523.1 2254622 2256004 R PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(2254622..2256004) Roseiflexus sp. RS-1 5208785 YP_001276166.1 CDS RoseRS_1827 NC_009523.1 2256034 2256408 R hypothetical protein complement(2256034..2256408) Roseiflexus sp. RS-1 5208786 YP_001276167.1 CDS RoseRS_1828 NC_009523.1 2256498 2257874 D glycogen debranching protein 2256498..2257874 Roseiflexus sp. RS-1 5208787 YP_001276168.1 CDS RoseRS_1829 NC_009523.1 2257901 2259019 R PFAM: phosphofructokinase; 6-phosphofructokinase complement(2257901..2259019) Roseiflexus sp. RS-1 5208788 YP_001276169.1 CDS RoseRS_1830 NC_009523.1 2259230 2260270 R catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase complement(2259230..2260270) Roseiflexus sp. RS-1 5208789 YP_001276170.1 CDS RoseRS_1831 NC_009523.1 2260283 2261440 R PFAM: phosphofructokinase; 6-phosphofructokinase complement(2260283..2261440) Roseiflexus sp. RS-1 5208790 YP_001276171.1 CDS RoseRS_1832 NC_009523.1 2261786 2262766 D hypothetical protein 2261786..2262766 Roseiflexus sp. RS-1 5208791 YP_001276172.1 CDS RoseRS_1833 NC_009523.1 2262763 2263926 D hypothetical protein 2262763..2263926 Roseiflexus sp. RS-1 5208792 YP_001276173.1 CDS RoseRS_1834 NC_009523.1 2263948 2264922 D hypothetical protein 2263948..2264922 Roseiflexus sp. RS-1 5208793 YP_001276174.1 CDS RoseRS_1835 NC_009523.1 2264983 2265930 D PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase 2264983..2265930 Roseiflexus sp. RS-1 5208794 YP_001276175.1 CDS RoseRS_1836 NC_009523.1 2266563 2267885 D PFAM: protein of unknown function DUF58; hypothetical protein 2266563..2267885 Roseiflexus sp. RS-1 5208795 YP_001276176.1 CDS RoseRS_1837 NC_009523.1 2267972 2268880 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase 2267972..2268880 Roseiflexus sp. RS-1 5208796 YP_001276177.1 CDS RoseRS_1838 NC_009523.1 2268890 2271028 D hypothetical protein 2268890..2271028 Roseiflexus sp. RS-1 5208797 YP_001276178.1 CDS RoseRS_1839 NC_009523.1 2271412 2272200 D hypothetical protein 2271412..2272200 Roseiflexus sp. RS-1 5208798 YP_001276179.1 CDS RoseRS_1840 NC_009523.1 2272229 2274721 D hypothetical protein 2272229..2274721 Roseiflexus sp. RS-1 5208799 YP_001276180.1 CDS RoseRS_1841 NC_009523.1 2274777 2276294 D hypothetical protein 2274777..2276294 Roseiflexus sp. RS-1 5208800 YP_001276181.1 CDS RoseRS_1842 NC_009523.1 2276568 2276858 R PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(2276568..2276858) Roseiflexus sp. RS-1 5208802 YP_001276182.1 CDS RoseRS_1843 NC_009523.1 2276963 2278225 R PFAM: von Willebrand factor, type A; von Willebrand factor, type A complement(2276963..2278225) Roseiflexus sp. RS-1 5208803 YP_001276183.1 CDS RoseRS_1844 NC_009523.1 2278465 2279922 D PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 2278465..2279922 Roseiflexus sp. RS-1 5208804 YP_001276184.1 CDS RoseRS_1845 NC_009523.1 2279926 2280732 D TIGRFAM: phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase I 2279926..2280732 Roseiflexus sp. RS-1 5208805 YP_001276185.1 CDS RoseRS_1846 NC_009523.1 2281003 2281836 R PFAM: extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(2281003..2281836) Roseiflexus sp. RS-1 5208806 YP_001276186.1 CDS RoseRS_1847 NC_009523.1 2282029 2282673 D hypothetical protein 2282029..2282673 Roseiflexus sp. RS-1 5208807 YP_001276187.1 CDS RoseRS_1848 NC_009523.1 2282737 2284719 D PFAM: peptidase M41; AAA ATPase, central domain protein; SMART: AAA ATPase; ATPase central domain-containing protein 2282737..2284719 Roseiflexus sp. RS-1 5208808 YP_001276188.1 CDS RoseRS_1849 NC_009523.1 2284946 2285485 D hypothetical protein 2284946..2285485 Roseiflexus sp. RS-1 5208809 YP_001276189.1 CDS RoseRS_1850 NC_009523.1 2285698 2286492 D hypothetical protein 2285698..2286492 Roseiflexus sp. RS-1 5208810 YP_001276190.1 CDS RoseRS_1851 NC_009523.1 2286549 2287592 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; type I glyceraldehyde-3-phosphate dehydrogenase complement(2286549..2287592) Roseiflexus sp. RS-1 5208811 YP_001276191.1 CDS RoseRS_1852 NC_009523.1 2287679 2288791 R PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; nucleotidyl transferase complement(2287679..2288791) Roseiflexus sp. RS-1 5208812 YP_001276192.1 CDS RoseRS_1853 NC_009523.1 2288788 2289747 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(2288788..2289747) Roseiflexus sp. RS-1 5208813 YP_001276193.1 CDS RoseRS_1854 NC_009523.1 2289963 2290844 R hypothetical protein complement(2289963..2290844) Roseiflexus sp. RS-1 5208814 YP_001276194.1 CDS RoseRS_1855 NC_009523.1 2291083 2291586 D PFAM: Ferritin, Dps family protein; ferroxidase 2291083..2291586 Roseiflexus sp. RS-1 5208815 YP_001276195.1 CDS RoseRS_1856 NC_009523.1 2292000 2294138 R hypothetical protein complement(2292000..2294138) Roseiflexus sp. RS-1 5208816 YP_001276196.1 CDS RoseRS_1857 NC_009523.1 2294143 2296278 R hypothetical protein complement(2294143..2296278) Roseiflexus sp. RS-1 5208817 YP_001276197.1 CDS RoseRS_1858 NC_009523.1 2296280 2296867 R hypothetical protein complement(2296280..2296867) Roseiflexus sp. RS-1 5208818 YP_001276198.1 CDS RoseRS_1859 NC_009523.1 2296864 2298648 R PFAM: protein of unknown function DUF324; hypothetical protein complement(2296864..2298648) Roseiflexus sp. RS-1 5208819 YP_001276199.1 CDS RoseRS_1860 NC_009523.1 2298651 2301116 R PFAM: protein of unknown function DUF324; hypothetical protein complement(2298651..2301116) Roseiflexus sp. RS-1 5208820 YP_001276200.1 CDS RoseRS_1861 NC_009523.1 2301113 2302750 R hypothetical protein complement(2301113..2302750) Roseiflexus sp. RS-1 5208821 YP_001276201.1 CDS RoseRS_1862 NC_009523.1 2302772 2304529 R hypothetical protein complement(2302772..2304529) Roseiflexus sp. RS-1 5208822 YP_001276202.1 CDS RoseRS_1863 NC_009523.1 2304703 2305596 R PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; response regulator receiver protein complement(2304703..2305596) Roseiflexus sp. RS-1 5208823 YP_001276203.1 CDS RoseRS_1864 NC_009523.1 2305635 2306828 D hypothetical protein 2305635..2306828 Roseiflexus sp. RS-1 5208824 YP_001276204.1 CDS RoseRS_1865 NC_009523.1 2307164 2308657 D TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; CRISPR-associated Cst1 family protein 2307164..2308657 Roseiflexus sp. RS-1 5208825 YP_001276205.1 CDS RoseRS_1866 NC_009523.1 2308676 2309767 D TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; CRISPR-associated autoregulator DevR family protein 2308676..2309767 Roseiflexus sp. RS-1 5208826 YP_001276206.1 CDS RoseRS_1867 NC_009523.1 2310196 2310933 D TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; CRISPR-associated Cas5 family protein 2310196..2310933 Roseiflexus sp. RS-1 5208827 YP_001276207.1 CDS RoseRS_1868 NC_009523.1 2310911 2313262 D TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; CRISPR-associated helicase Cas3 2310911..2313262 Roseiflexus sp. RS-1 5208828 YP_001276208.1 CDS RoseRS_1869 NC_009523.1 2313297 2314256 D hypothetical protein 2313297..2314256 Roseiflexus sp. RS-1 5208829 YP_001276209.1 CDS RoseRS_1870 NC_009523.1 2314536 2315549 D TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated Cas1 family protein 2314536..2315549 Roseiflexus sp. RS-1 5208830 YP_001276210.1 CDS RoseRS_1871 NC_009523.1 2315554 2315808 D TIGRFAM: CRISPR-associated protein Cas2; CRISPR-associated Cas2 family protein 2315554..2315808 Roseiflexus sp. RS-1 5208831 YP_001276211.1 CDS RoseRS_1872 NC_009523.1 2315805 2316401 D TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated Cas4 family protein 2315805..2316401 Roseiflexus sp. RS-1 5208832 YP_001276212.1 CDS RoseRS_1873 NC_009523.1 2320562 2321619 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(2320562..2321089,2321089..2321619)) Roseiflexus sp. RS-1 5208833 YP_001276213.1 CDS RoseRS_1874 NC_009523.1 2326114 2326440 D PFAM: protein of unknown function UPF0150; hypothetical protein 2326114..2326440 Roseiflexus sp. RS-1 5208834 YP_001276214.1 CDS RoseRS_1875 NC_009523.1 2327404 2328051 D amidophosphoribosyltransferase-like protein 2327404..2328051 Roseiflexus sp. RS-1 5208835 YP_001276215.1 CDS RoseRS_1876 NC_009523.1 2328060 2329493 R PFAM: type II secretion system protein E; type II secretion system protein E complement(2328060..2329493) Roseiflexus sp. RS-1 5208836 YP_001276216.1 CDS RoseRS_1877 NC_009523.1 2329510 2330886 R PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; ATPase central domain-containing protein complement(2329510..2330886) Roseiflexus sp. RS-1 5208837 YP_001276217.1 CDS RoseRS_1878 NC_009523.1 2330883 2331575 R hypothetical protein complement(2330883..2331575) Roseiflexus sp. RS-1 5208838 YP_001276218.1 CDS RoseRS_1879 NC_009523.1 2331722 2332579 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(2331722..2332579) Roseiflexus sp. RS-1 5208839 YP_001276219.1 CDS RoseRS_1880 NC_009523.1 2332587 2333426 R PFAM: Abortive infection protein; abortive infection protein complement(2332587..2333426) Roseiflexus sp. RS-1 5208840 YP_001276220.1 CDS RoseRS_1881 NC_009523.1 2333426 2334856 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(2333426..2334856) Roseiflexus sp. RS-1 5208841 YP_001276221.1 CDS RoseRS_1882 NC_009523.1 2335149 2339417 D hypothetical protein 2335149..2339417 Roseiflexus sp. RS-1 5208842 YP_001276222.1 CDS RoseRS_1883 NC_009523.1 2339475 2339678 D hypothetical protein 2339475..2339678 Roseiflexus sp. RS-1 5208843 YP_001276223.1 CDS RoseRS_1884 NC_009523.1 2339681 2340076 D PFAM: PilT protein domain protein; PilT domain-containing protein 2339681..2340076 Roseiflexus sp. RS-1 5208844 YP_001276224.1 CDS RoseRS_1885 NC_009523.1 2340454 2340882 D hypothetical protein 2340454..2340882 Roseiflexus sp. RS-1 5208846 YP_001276225.1 CDS RoseRS_1886 NC_009523.1 2340894 2342627 D hypothetical protein 2340894..2342627 Roseiflexus sp. RS-1 5208847 YP_001276226.1 CDS RoseRS_1887 NC_009523.1 2342674 2342874 D hypothetical protein 2342674..2342874 Roseiflexus sp. RS-1 5208848 YP_001276227.1 CDS RoseRS_1888 NC_009523.1 2342888 2343892 D PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase 2342888..2343892 Roseiflexus sp. RS-1 5208849 YP_001276228.1 CDS RoseRS_1889 NC_009523.1 2343924 2344832 D PFAM: protein of unknown function DUF58; hypothetical protein 2343924..2344832 Roseiflexus sp. RS-1 5208850 YP_001276229.1 CDS RoseRS_1890 NC_009523.1 2344848 2346782 D TIGRFAM: conserved hypothetical membrane protein; PFAM: von Willebrand factor, type A; hypothetical protein 2344848..2346782 Roseiflexus sp. RS-1 5208851 YP_001276230.1 CDS RoseRS_1891 NC_009523.1 2346784 2349582 D PFAM: von Willebrand factor, type A; protein of unknown function DUF1355; von Willebrand factor, type A 2346784..2349582 Roseiflexus sp. RS-1 5208852 YP_001276231.1 CDS RoseRS_1892 NC_009523.1 2349588 2350622 R PFAM: aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(2349588..2350622) Roseiflexus sp. RS-1 5208853 YP_001276232.1 CDS RoseRS_1893 NC_009523.1 2350802 2351299 R hypothetical protein complement(2350802..2351299) Roseiflexus sp. RS-1 5208854 YP_001276233.1 CDS RoseRS_1894 NC_009523.1 2351972 2352586 R hypothetical protein complement(2351972..2352586) Roseiflexus sp. RS-1 5208855 YP_001276234.1 CDS RoseRS_1895 NC_009523.1 2352583 2352984 R PFAM: CBS domain containing protein; hypothetical protein complement(2352583..2352984) Roseiflexus sp. RS-1 5208856 YP_001276235.1 CDS RoseRS_1896 NC_009523.1 2353042 2353350 R hypothetical protein complement(2353042..2353350) Roseiflexus sp. RS-1 5208857 YP_001276236.1 CDS RoseRS_1897 NC_009523.1 2353526 2354992 D PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; GAF sensor signal transduction histidine kinase 2353526..2354992 Roseiflexus sp. RS-1 5208858 YP_001276237.1 CDS RoseRS_1898 NC_009523.1 2355566 2356351 D hypothetical protein 2355566..2356351 Roseiflexus sp. RS-1 5208859 YP_001276238.1 CDS RoseRS_1899 NC_009523.1 2356599 2359469 D TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DEXDc2; helicase c2; DNA polymerase III subunit epsilon 2356599..2359469 Roseiflexus sp. RS-1 5208860 YP_001276239.1 CDS RoseRS_1900 NC_009523.1 2359531 2359836 R hypothetical protein complement(2359531..2359836) Roseiflexus sp. RS-1 5208861 YP_001276240.1 CDS RoseRS_1901 NC_009523.1 2359848 2360132 R hypothetical protein complement(2359848..2360132) Roseiflexus sp. RS-1 5208862 YP_001276241.1 CDS RoseRS_1902 NC_009523.1 2360267 2361406 R TIGRFAM: magnesium chelatase ATPase subunit I; SMART: AAA ATPase; magnesium chelatase ATPase subunit I complement(2360267..2361406) Roseiflexus sp. RS-1 5208863 YP_001276242.1 CDS RoseRS_1903 NC_009523.1 2361412 2362713 R PFAM: PUCC protein; major facilitator superfamily MFS_1; PUCC protein complement(2361412..2362713) Roseiflexus sp. RS-1 5208864 YP_001276243.1 CDS RoseRS_1904 NC_009523.1 2362839 2366741 R catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis; magnesium chelatase subunit H complement(2362839..2366741) Roseiflexus sp. RS-1 5208865 YP_001276244.1 CDS RoseRS_1905 NC_009523.1 2366738 2367853 R oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase complement(2366738..2367853) Roseiflexus sp. RS-1 5208866 YP_001276245.1 CDS RoseRS_1906 NC_009523.1 2367915 2368256 R hypothetical protein complement(2367915..2368256) Roseiflexus sp. RS-1 5208867 YP_001276246.1 CDS RoseRS_1907 NC_009523.1 2368458 2369171 R catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase complement(2368458..2369171) Roseiflexus sp. RS-1 5208868 YP_001276247.1 CDS chlL NC_009523.1 2369162 2369983 R light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein complement(2369162..2369983) Roseiflexus sp. RS-1 5208869 YP_001276248.1 CDS RoseRS_1909 NC_009523.1 2370004 2371710 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B complement(2370004..2371710) Roseiflexus sp. RS-1 5208870 YP_001276249.1 CDS RoseRS_1910 NC_009523.1 2371875 2373122 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N complement(2371875..2373122) Roseiflexus sp. RS-1 5208871 YP_001276250.1 CDS RoseRS_1911 NC_009523.1 2373265 2374065 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(2373265..2374065) Roseiflexus sp. RS-1 5208872 YP_001276251.1 CDS RoseRS_1912 NC_009523.1 2374082 2375455 R PFAM: PUCC protein; PUCC protein complement(2374082..2375455) Roseiflexus sp. RS-1 5208873 YP_001276252.1 CDS RoseRS_1913 NC_009523.1 2377314 2378282 R hypothetical protein complement(2377314..2378282) Roseiflexus sp. RS-1 5208874 YP_001276253.1 CDS RoseRS_1914 NC_009523.1 2378366 2379235 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2378366..2379235) Roseiflexus sp. RS-1 5208875 YP_001276254.1 CDS RoseRS_1915 NC_009523.1 2379369 2381072 D PFAM: peptidase S9B, dipeptidylpeptidase IV domain protein; WD40 domain protein beta Propeller; WD40 domain-containing protein 2379369..2381072 Roseiflexus sp. RS-1 5208876 YP_001276255.1 CDS RoseRS_1916 NC_009523.1 2381103 2382845 R TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; sulfate transporter complement(2381103..2382845) Roseiflexus sp. RS-1 5208877 YP_001276256.1 CDS RoseRS_1917 NC_009523.1 2383213 2384382 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 2383213..2384382 Roseiflexus sp. RS-1 5208878 YP_001276257.1 CDS RoseRS_1918 NC_009523.1 2384467 2385291 R PFAM: Abortive infection protein; abortive infection protein complement(2384467..2385291) Roseiflexus sp. RS-1 5208879 YP_001276258.1 CDS RoseRS_1919 NC_009523.1 2385321 2385884 R hypothetical protein complement(2385321..2385884) Roseiflexus sp. RS-1 5208880 YP_001276259.1 CDS RoseRS_1920 NC_009523.1 2385967 2386389 D hypothetical protein 2385967..2386389 Roseiflexus sp. RS-1 5208881 YP_001276260.1 CDS RoseRS_1921 NC_009523.1 2386453 2387256 R TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase complement(2386453..2387256) Roseiflexus sp. RS-1 5208882 YP_001276261.1 CDS RoseRS_1922 NC_009523.1 2387267 2387932 R PFAM: cobalt transport protein; cobalt transport protein complement(2387267..2387932) Roseiflexus sp. RS-1 5208883 YP_001276262.1 CDS RoseRS_1923 NC_009523.1 2387929 2388420 R PFAM: ABC transporter related; ABC transporter-like protein complement(2387929..2388420) Roseiflexus sp. RS-1 5208884 YP_001276263.1 CDS RoseRS_1924 NC_009523.1 2388475 2389536 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2388475..2389536) Roseiflexus sp. RS-1 5208885 YP_001276264.1 CDS RoseRS_1925 NC_009523.1 2389533 2390057 R TIGRFAM: thiW protein; thiW protein complement(2389533..2390057) Roseiflexus sp. RS-1 5208886 YP_001276265.1 CDS RoseRS_1926 NC_009523.1 2390543 2391355 R catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase complement(2390543..2391355) Roseiflexus sp. RS-1 5208887 YP_001276266.1 CDS thiE NC_009523.1 2391398 2392108 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(2391398..2392108) Roseiflexus sp. RS-1 5208888 YP_001276267.1 CDS RoseRS_1928 NC_009523.1 2392512 2393402 R PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p complement(2392512..2393402) Roseiflexus sp. RS-1 5208889 YP_001276268.1 CDS RoseRS_1929 NC_009523.1 2393563 2394012 R PFAM: heat shock protein Hsp20; heat shock protein Hsp20 complement(2393563..2394012) Roseiflexus sp. RS-1 5208890 YP_001276269.1 CDS RoseRS_1930 NC_009523.1 2394105 2395484 R PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; polynucleotide adenylyltransferase/metal dependent phosphohydrolase complement(2394105..2395484) Roseiflexus sp. RS-1 5208891 YP_001276270.1 CDS RoseRS_1931 NC_009523.1 2395733 2397358 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase 2395733..2397358 Roseiflexus sp. RS-1 5208892 YP_001276271.1 CDS RoseRS_1932 NC_009523.1 2397569 2398957 D hypothetical protein 2397569..2398957 Roseiflexus sp. RS-1 5208893 YP_001276272.1 CDS RoseRS_1934 NC_009523.1 2399752 2401170 R PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2399752..2401170) Roseiflexus sp. RS-1 5208895 YP_001276273.1 CDS RoseRS_1935 NC_009523.1 2401395 2402660 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase, HAMP region domain protein; anti-sigma-factor antagonist 2401395..2402660 Roseiflexus sp. RS-1 5208896 YP_001276274.1 CDS RoseRS_1936 NC_009523.1 2402657 2403601 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 2402657..2403601 Roseiflexus sp. RS-1 5208897 YP_001276275.1 CDS RoseRS_1937 NC_009523.1 2403980 2404225 D hypothetical protein 2403980..2404225 Roseiflexus sp. RS-1 5208898 YP_001276276.1 CDS RoseRS_1938 NC_009523.1 2404315 2404845 R hypothetical protein complement(2404315..2404845) Roseiflexus sp. RS-1 5208899 YP_001276277.1 CDS RoseRS_1939 NC_009523.1 2405092 2406525 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(2405092..2406525) Roseiflexus sp. RS-1 5208900 YP_001276278.1 CDS RoseRS_1940 NC_009523.1 2406586 2407182 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(2406586..2407182) Roseiflexus sp. RS-1 5208901 YP_001276279.1 CDS RoseRS_1941 NC_009523.1 2407363 2407620 D hypothetical protein 2407363..2407620 Roseiflexus sp. RS-1 5208902 YP_001276280.1 CDS RoseRS_1942 NC_009523.1 2408083 2408970 D hypothetical protein 2408083..2408970 Roseiflexus sp. RS-1 5208904 YP_001276281.1 CDS RoseRS_1943 NC_009523.1 2408980 2409552 D hypothetical protein 2408980..2409552 Roseiflexus sp. RS-1 5208905 YP_001276282.1 CDS RoseRS_1944 NC_009523.1 2409777 2410109 D hypothetical protein 2409777..2410109 Roseiflexus sp. RS-1 5208906 YP_001276283.1 CDS RoseRS_1945 NC_009523.1 2410124 2410342 D hypothetical protein 2410124..2410342 Roseiflexus sp. RS-1 5208907 YP_001276284.1 CDS RoseRS_1946 NC_009523.1 2410424 2411245 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(2410424..2411245) Roseiflexus sp. RS-1 5208908 YP_001276285.1 CDS RoseRS_1947 NC_009523.1 2411295 2412110 D hypothetical protein 2411295..2412110 Roseiflexus sp. RS-1 5208909 YP_001276286.1 CDS RoseRS_1948 NC_009523.1 2412156 2414723 D TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 2412156..2414723 Roseiflexus sp. RS-1 5208910 YP_001276287.1 CDS RoseRS_1949 NC_009523.1 2414746 2416947 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase complement(2414746..2416947) Roseiflexus sp. RS-1 5208911 YP_001276288.1 CDS RoseRS_1950 NC_009523.1 2417202 2418794 D PFAM: Amidohydrolase 3; amidohydrolase 3 2417202..2418794 Roseiflexus sp. RS-1 5208912 YP_001276289.1 CDS RoseRS_1951 NC_009523.1 2418828 2420258 D PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2418828..2420258 Roseiflexus sp. RS-1 5208913 YP_001276290.1 CDS RoseRS_1952 NC_009523.1 2420275 2421351 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2420275..2421351 Roseiflexus sp. RS-1 5208914 YP_001276291.1 CDS RoseRS_1953 NC_009523.1 2421554 2423527 D AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 2421554..2423527 Roseiflexus sp. RS-1 5208915 YP_001276292.1 CDS RoseRS_1954 NC_009523.1 2423531 2424148 D hypothetical protein 2423531..2424148 Roseiflexus sp. RS-1 5208916 YP_001276293.1 CDS RoseRS_1955 NC_009523.1 2424235 2424636 R PFAM: response regulator receiver; response regulator receiver protein complement(2424235..2424636) Roseiflexus sp. RS-1 5208917 YP_001276294.1 CDS RoseRS_1956 NC_009523.1 2425494 2426048 R hypothetical protein complement(2425494..2426048) Roseiflexus sp. RS-1 5208918 YP_001276295.1 CDS RoseRS_1958 NC_009523.1 2437021 2438124 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(2437021..2438124) Roseiflexus sp. RS-1 5208920 YP_001276296.1 CDS RoseRS_1959 NC_009523.1 2438137 2438625 R PFAM: Uncharacterized protein UPF0114; hypothetical protein complement(2438137..2438625) Roseiflexus sp. RS-1 5208921 YP_001276297.1 CDS leuD NC_009523.1 2438632 2439246 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(2438632..2439246) Roseiflexus sp. RS-1 5208922 YP_001276298.1 CDS RoseRS_1961 NC_009523.1 2440366 2441790 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(2440366..2441790) Roseiflexus sp. RS-1 5208923 YP_001276299.1 CDS RoseRS_1962 NC_009523.1 2441847 2442773 R TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase, class IV; branched-chain amino acid aminotransferase complement(2441847..2442773) Roseiflexus sp. RS-1 5208924 YP_001276300.1 CDS RoseRS_1963 NC_009523.1 2442952 2444574 R TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; putative alpha-isopropylmalate/homocitrate synthase family transferase complement(2442952..2444574) Roseiflexus sp. RS-1 5208925 YP_001276301.1 CDS RoseRS_1964 NC_009523.1 2444614 2445453 R PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; prephenate dehydratase complement(2444614..2445453) Roseiflexus sp. RS-1 5208926 YP_001276302.1 CDS RoseRS_1965 NC_009523.1 2445511 2447181 R TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase complement(2445511..2447181) Roseiflexus sp. RS-1 5208927 YP_001276303.2 CDS RoseRS_1966 NC_009523.1 2447209 2448231 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2447209..2448231) Roseiflexus sp. RS-1 5208928 YP_001276304.1 CDS RoseRS_1967 NC_009523.1 2448323 2448865 R TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit complement(2448323..2448865) Roseiflexus sp. RS-1 5208929 YP_001276305.1 CDS RoseRS_1968 NC_009523.1 2448912 2450657 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; acetolactate synthase large subunit complement(2448912..2450657) Roseiflexus sp. RS-1 5208930 YP_001276306.1 CDS RoseRS_1969 NC_009523.1 2450980 2451291 R hypothetical protein complement(2450980..2451291) Roseiflexus sp. RS-1 5208931 YP_001276307.1 CDS RoseRS_1970 NC_009523.1 2451269 2452237 R PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent enzyme subunit beta complement(2451269..2452237) Roseiflexus sp. RS-1 5208932 YP_001276308.1 CDS RoseRS_1971 NC_009523.1 2452253 2453314 R PFAM: homoserine dehydrogenase; homoserine dehydrogenase, NAD-binding; homoserine dehydrogenase complement(2452253..2453314) Roseiflexus sp. RS-1 5208933 YP_001276309.1 CDS RoseRS_1972 NC_009523.1 2453558 2453902 D hypothetical protein 2453558..2453902 Roseiflexus sp. RS-1 5208934 YP_001276310.1 CDS RoseRS_1973 NC_009523.1 2454090 2454983 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(2454090..2454983) Roseiflexus sp. RS-1 5208935 YP_001276311.1 CDS RoseRS_1974 NC_009523.1 2454980 2455966 R PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(2454980..2455966) Roseiflexus sp. RS-1 5208936 YP_001276312.1 CDS RoseRS_1975 NC_009523.1 2455985 2456554 R PFAM: sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region complement(2455985..2456554) Roseiflexus sp. RS-1 5208937 YP_001276313.1 CDS RoseRS_1976 NC_009523.1 2456623 2457132 D PFAM: CoA-binding domain protein; CoA-binding domain-containing protein 2456623..2457132 Roseiflexus sp. RS-1 5208938 YP_001276314.1 CDS RoseRS_1977 NC_009523.1 2457233 2458408 D PFAM: N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase 2457233..2458408 Roseiflexus sp. RS-1 5208939 YP_001276315.1 CDS RoseRS_1978 NC_009523.1 2458355 2459107 R TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(2458355..2459107) Roseiflexus sp. RS-1 5208940 YP_001276316.1 CDS RoseRS_1979 NC_009523.1 2459206 2460975 D TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); GAD domain protein; tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; aspartyl-tRNA synthetase 2459206..2460975 Roseiflexus sp. RS-1 5208941 YP_001276317.1 CDS RoseRS_1980 NC_009523.1 2460991 2461557 D TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; ATP--cobalamin adenosyltransferase 2460991..2461557 Roseiflexus sp. RS-1 5208942 YP_001276318.1 CDS RoseRS_1981 NC_009523.1 2461713 2462666 D PFAM: ribosomal RNA methyltransferase; ribosomal RNA methyltransferase 2461713..2462666 Roseiflexus sp. RS-1 5208943 YP_001276319.1 CDS RoseRS_1982 NC_009523.1 2462894 2463778 D PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p 2462894..2463778 Roseiflexus sp. RS-1 5208944 YP_001276320.1 CDS RoseRS_1983 NC_009523.1 2463933 2465342 D PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; multi-sensor signal transduction histidine kinase 2463933..2465342 Roseiflexus sp. RS-1 5208945 YP_001276321.1 CDS RoseRS_1984 NC_009523.1 2465430 2466092 D PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator 2465430..2466092 Roseiflexus sp. RS-1 5208946 YP_001276322.1 CDS RoseRS_1985 NC_009523.1 2466110 2467078 R PFAM: protein of unknown function DUF897; hypothetical protein complement(2466110..2467078) Roseiflexus sp. RS-1 5208947 YP_001276323.1 CDS RoseRS_1986 NC_009523.1 2467192 2467908 D PFAM: Methyltransferase type 11; type 11 methyltransferase 2467192..2467908 Roseiflexus sp. RS-1 5208948 YP_001276324.1 CDS RoseRS_1987 NC_009523.1 2467962 2468210 R hypothetical protein complement(2467962..2468210) Roseiflexus sp. RS-1 5208949 YP_001276325.1 CDS RoseRS_1988 NC_009523.1 2468324 2469445 D TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities 2468324..2469445 Roseiflexus sp. RS-1 5208950 YP_001276326.1 CDS RoseRS_1989 NC_009523.1 2469476 2469706 R hypothetical protein complement(2469476..2469706) Roseiflexus sp. RS-1 5208951 YP_001276327.1 CDS RoseRS_1990 NC_009523.1 2470151 2471725 D PFAM: Alkaline phosphatase; alkaline phosphatase 2470151..2471725 Roseiflexus sp. RS-1 5208952 YP_001276328.1 CDS RoseRS_1991 NC_009523.1 2472258 2473076 R PFAM: molybdopterin binding domain; molybdopterin binding domain-containing protein complement(2472258..2473076) Roseiflexus sp. RS-1 5208953 YP_001276329.1 CDS RoseRS_1992 NC_009523.1 2473449 2473709 R hypothetical protein complement(2473449..2473709) Roseiflexus sp. RS-1 5208954 YP_001276330.1 CDS RoseRS_1993 NC_009523.1 2473702 2473989 R hypothetical protein complement(2473702..2473989) Roseiflexus sp. RS-1 5208955 YP_001276331.1 CDS RoseRS_1995 NC_009523.1 2474580 2474966 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(2474580..2474966) Roseiflexus sp. RS-1 5208957 YP_001276332.1 CDS RoseRS_1996 NC_009523.1 2474963 2475190 R TIGRFAM: prevent-host-death family protein; prevent-host-death family protein complement(2474963..2475190) Roseiflexus sp. RS-1 5208958 YP_001276333.1 CDS RoseRS_1997 NC_009523.1 2475353 2476729 R PFAM: MOFRL domain protein; hydroxypyruvate reductase complement(2475353..2476729) Roseiflexus sp. RS-1 5208959 YP_001276334.1 CDS RoseRS_1998 NC_009523.1 2476726 2478537 R TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; pepF/M3 family oligoendopeptidase complement(2476726..2478537) Roseiflexus sp. RS-1 5208960 YP_001276335.1 CDS RoseRS_1999 NC_009523.1 2478661 2479914 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(2478661..2479914) Roseiflexus sp. RS-1 5208961 YP_001276336.1 CDS RoseRS_2000 NC_009523.1 2479928 2480203 R hypothetical protein complement(2479928..2480203) Roseiflexus sp. RS-1 5208962 YP_001276337.1 CDS RoseRS_2001 NC_009523.1 2480465 2481202 R TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; ribonuclease PH complement(2480465..2481202) Roseiflexus sp. RS-1 5208963 YP_001276338.1 CDS RoseRS_2002 NC_009523.1 2481279 2481827 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2481279..2481827 Roseiflexus sp. RS-1 5208964 YP_001276339.1 CDS RoseRS_2003 NC_009523.1 2481930 2483882 R TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetate--CoA ligase complement(2481930..2483882) Roseiflexus sp. RS-1 5208965 YP_001276340.1 CDS RoseRS_2004 NC_009523.1 2483934 2485853 R TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetate--CoA ligase complement(2483934..2485853) Roseiflexus sp. RS-1 5208966 YP_001276341.1 CDS RoseRS_2005 NC_009523.1 2486032 2486364 R hypothetical protein complement(2486032..2486364) Roseiflexus sp. RS-1 5208967 YP_001276342.1 CDS RoseRS_2006 NC_009523.1 2487092 2487793 R TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon complement(2487092..2487793) Roseiflexus sp. RS-1 5208968 YP_001276343.1 CDS RoseRS_2007 NC_009523.1 2487795 2489666 R PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; hypothetical protein complement(2487795..2489666) Roseiflexus sp. RS-1 5208969 YP_001276344.1 CDS RoseRS_2008 NC_009523.1 2489678 2491396 R TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; single-stranded-DNA-specific exonuclease RecJ complement(2489678..2491396) Roseiflexus sp. RS-1 5208970 YP_001276345.1 CDS RoseRS_2009 NC_009523.1 2492925 2497433 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2492925..2497433 Roseiflexus sp. RS-1 5208971 YP_001276346.1 CDS RoseRS_2010 NC_009523.1 2498416 2500002 D hypothetical protein 2498416..2500002 Roseiflexus sp. RS-1 5208972 YP_001276347.1 CDS RoseRS_2011 NC_009523.1 2500066 2500359 D PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein 2500066..2500359 Roseiflexus sp. RS-1 5208973 YP_001276348.1 CDS RoseRS_2012 NC_009523.1 2500832 2501896 D hypothetical protein 2500832..2501896 Roseiflexus sp. RS-1 5208974 YP_001276349.1 CDS RoseRS_2013 NC_009523.1 2502738 2502965 D hypothetical protein 2502738..2502965 Roseiflexus sp. RS-1 5208975 YP_001276350.1 CDS RoseRS_2014 NC_009523.1 2503128 2503970 R PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(2503128..2503970) Roseiflexus sp. RS-1 5208976 YP_001276351.1 CDS RoseRS_2015 NC_009523.1 2503975 2504685 R TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(2503975..2504685) Roseiflexus sp. RS-1 5208977 YP_001276352.1 CDS frr NC_009523.1 2504804 2505361 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2504804..2505361) Roseiflexus sp. RS-1 5208978 YP_001276353.1 CDS pyrH NC_009523.1 2505455 2506201 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2505455..2506201) Roseiflexus sp. RS-1 5208979 YP_001276354.1 CDS RoseRS_2018 NC_009523.1 2506277 2506807 R TIGRFAM: translation elongation factor Ts; PFAM: ubiquitin-associated- domain-containing protein; elongation factor Ts; translation elongation factor Ts complement(2506277..2506807) Roseiflexus sp. RS-1 5208980 YP_001276355.1 CDS rpsB NC_009523.1 2506898 2507686 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2506898..2507686) Roseiflexus sp. RS-1 5208981 YP_001276356.1 CDS RoseRS_2020 NC_009523.1 2508038 2509336 D PFAM: glycosyl transferase, group 1; Glycosyltransferase 28, C-terminal domain; Monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 2508038..2509336 Roseiflexus sp. RS-1 5208982 YP_001276357.1 CDS RoseRS_2022 NC_009523.1 2509920 2510546 D hypothetical protein 2509920..2510546 Roseiflexus sp. RS-1 5208984 YP_001276358.1 CDS RoseRS_2023 NC_009523.1 2510543 2511529 D PFAM: Prephenate dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; prephenate dehydrogenase 2510543..2511529 Roseiflexus sp. RS-1 5208985 YP_001276359.1 CDS RoseRS_2024 NC_009523.1 2511542 2511946 D PFAM: cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 2511542..2511946 Roseiflexus sp. RS-1 5208986 YP_001276360.1 CDS RoseRS_2025 NC_009523.1 2511951 2512889 D TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; LAO/AO transport system ATPase 2511951..2512889 Roseiflexus sp. RS-1 5208987 YP_001276361.1 CDS RoseRS_2026 NC_009523.1 2513002 2513520 D PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 2513002..2513520 Roseiflexus sp. RS-1 5208988 YP_001276362.1 CDS RoseRS_2027 NC_009523.1 2513557 2514708 R PFAM: aminotransferase, class I and II; GntR family transcriptional regulator complement(2513557..2514708) Roseiflexus sp. RS-1 5208989 YP_001276363.1 CDS RoseRS_2028 NC_009523.1 2514921 2518664 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase complement(2514921..2518664) Roseiflexus sp. RS-1 5208990 YP_001276364.1 CDS RoseRS_2029 NC_009523.1 2518824 2519525 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 2518824..2519525 Roseiflexus sp. RS-1 5208991 YP_001276365.1 CDS RoseRS_2030 NC_009523.1 2520339 2520752 D hypothetical protein 2520339..2520752 Roseiflexus sp. RS-1 5208992 YP_001276366.1 CDS RoseRS_2031 NC_009523.1 2520772 2522181 R TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase complement(2520772..2522181) Roseiflexus sp. RS-1 5208993 YP_001276367.1 CDS RoseRS_2032 NC_009523.1 2522188 2523117 R PFAM: methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase complement(2522188..2523117) Roseiflexus sp. RS-1 5208994 YP_001276368.1 CDS RoseRS_2033 NC_009523.1 2523141 2523956 R PFAM: UspA domain protein; UspA domain-containing protein complement(2523141..2523956) Roseiflexus sp. RS-1 5208995 YP_001276369.1 CDS RoseRS_2034 NC_009523.1 2523959 2525065 R hypothetical protein complement(2523959..2525065) Roseiflexus sp. RS-1 5208996 YP_001276370.1 CDS RoseRS_2035 NC_009523.1 2525062 2525967 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(2525062..2525967) Roseiflexus sp. RS-1 5208997 YP_001276371.1 CDS RoseRS_2036 NC_009523.1 2526452 2526793 R hypothetical protein complement(2526452..2526793) Roseiflexus sp. RS-1 5208998 YP_001276372.1 CDS RoseRS_2037 NC_009523.1 2526899 2528677 R TIGRFAM: methionyl-tRNA synthetase; PFAM: methionyl-tRNA synthetase, class Ia; methionyl-tRNA synthetase complement(2526899..2528677) Roseiflexus sp. RS-1 5208999 YP_001276373.1 CDS RoseRS_2038 NC_009523.1 2528964 2529266 R TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin, Txe/YoeB; addiction module antitoxin complement(2528964..2529266) Roseiflexus sp. RS-1 5209000 YP_001276374.1 CDS RoseRS_2039 NC_009523.1 2529250 2529537 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein complement(2529250..2529537) Roseiflexus sp. RS-1 5209001 YP_001276375.1 CDS RoseRS_2040 NC_009523.1 2529646 2530374 D hypothetical protein 2529646..2530374 Roseiflexus sp. RS-1 5209002 YP_001276376.1 CDS RoseRS_2041 NC_009523.1 2530375 2531484 D hypothetical protein 2530375..2531484 Roseiflexus sp. RS-1 5209003 YP_001276377.1 CDS RoseRS_2042 NC_009523.1 2531499 2532464 D hypothetical protein 2531499..2532464 Roseiflexus sp. RS-1 5209004 YP_001276378.1 CDS RoseRS_2043 NC_009523.1 2532472 2533056 D hypothetical protein 2532472..2533056 Roseiflexus sp. RS-1 5209005 YP_001276379.1 CDS RoseRS_2044 NC_009523.1 2533053 2534729 D PFAM: asparagine synthase; asparagine synthase 2533053..2534729 Roseiflexus sp. RS-1 5209006 YP_001276380.1 CDS RoseRS_2045 NC_009523.1 2534737 2536164 D hypothetical protein 2534737..2536164 Roseiflexus sp. RS-1 5209007 YP_001276381.1 CDS RoseRS_2046 NC_009523.1 2536206 2537009 R PFAM: Dimethylmenaquinone methyltransferase; hypothetical protein complement(2536206..2537009) Roseiflexus sp. RS-1 5209008 YP_001276382.1 CDS RoseRS_2047 NC_009523.1 2537053 2537994 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2537053..2537994) Roseiflexus sp. RS-1 5209009 YP_001276383.1 CDS RoseRS_2048 NC_009523.1 2538384 2539184 D hypothetical protein 2538384..2539184 Roseiflexus sp. RS-1 5209010 YP_001276384.1 CDS RoseRS_2049 NC_009523.1 2539512 2540669 D PFAM: protein of unknown function DUF100; hypothetical protein 2539512..2540669 Roseiflexus sp. RS-1 5209011 YP_001276385.1 CDS RoseRS_2050 NC_009523.1 2540883 2541602 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2540883..2541602) Roseiflexus sp. RS-1 5209012 YP_001276386.1 CDS RoseRS_2052 NC_009523.1 2542556 2543479 R hypothetical protein complement(2542556..2543479) Roseiflexus sp. RS-1 5209014 YP_001276387.1 CDS RoseRS_2053 NC_009523.1 2543890 2545824 R PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase complement(2543890..2545824) Roseiflexus sp. RS-1 5209015 YP_001276388.1 CDS RoseRS_2055 NC_009523.1 2546179 2546406 R hypothetical protein complement(2546179..2546406) Roseiflexus sp. RS-1 5209017 YP_001276389.1 CDS RoseRS_2056 NC_009523.1 2546527 2547849 R hypothetical protein complement(2546527..2547849) Roseiflexus sp. RS-1 5209018 YP_001276390.1 CDS RoseRS_2057 NC_009523.1 2548030 2549544 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 2548030..2549544 Roseiflexus sp. RS-1 5209019 YP_001276391.1 CDS RoseRS_2058 NC_009523.1 2549553 2551382 D PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; citrate transporter 2549553..2551382 Roseiflexus sp. RS-1 5209020 YP_001276392.1 CDS RoseRS_2059 NC_009523.1 2551383 2551592 D hypothetical protein 2551383..2551592 Roseiflexus sp. RS-1 5209021 YP_001276393.1 CDS RoseRS_2060 NC_009523.1 2551785 2552870 D hypothetical protein 2551785..2552870 Roseiflexus sp. RS-1 5209022 YP_001276394.1 CDS RoseRS_2061 NC_009523.1 2552900 2553550 D hypothetical protein 2552900..2553550 Roseiflexus sp. RS-1 5209023 YP_001276395.1 CDS RoseRS_2062 NC_009523.1 2553547 2554479 D hypothetical protein 2553547..2554479 Roseiflexus sp. RS-1 5209024 YP_001276396.1 CDS RoseRS_2063 NC_009523.1 2554466 2555464 D hypothetical protein 2554466..2555464 Roseiflexus sp. RS-1 5209025 YP_001276397.1 CDS RoseRS_2064 NC_009523.1 2555540 2555953 D hypothetical protein 2555540..2555953 Roseiflexus sp. RS-1 5209026 YP_001276398.1 CDS RoseRS_2065 NC_009523.1 2555950 2557248 D hypothetical protein 2555950..2557248 Roseiflexus sp. RS-1 5209027 YP_001276399.1 CDS RoseRS_2066 NC_009523.1 2557245 2558681 D hypothetical protein 2557245..2558681 Roseiflexus sp. RS-1 5209028 YP_001276400.1 CDS RoseRS_2067 NC_009523.1 2558904 2560628 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport complement(2558904..2560628) Roseiflexus sp. RS-1 5209029 YP_001276401.1 CDS RoseRS_2068 NC_009523.1 2560892 2561143 D PFAM: protein of unknown function DUF433; hypothetical protein 2560892..2561143 Roseiflexus sp. RS-1 5209030 YP_001276402.1 CDS RoseRS_2069 NC_009523.1 2561298 2562572 R TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase complement(2561298..2562572) Roseiflexus sp. RS-1 5209031 YP_001276403.1 CDS RoseRS_2070 NC_009523.1 2563212 2563703 D PFAM: YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 2563212..2563703 Roseiflexus sp. RS-1 5209032 YP_001276404.1 CDS RoseRS_2071 NC_009523.1 2563734 2563949 D PFAM: protein of unknown function DUF1458; hypothetical protein 2563734..2563949 Roseiflexus sp. RS-1 5209033 YP_001276405.1 CDS RoseRS_2072 NC_009523.1 2564370 2564615 D hypothetical protein 2564370..2564615 Roseiflexus sp. RS-1 5209034 YP_001276406.1 CDS RoseRS_2073 NC_009523.1 2564617 2565240 D PFAM: cation efflux protein; cation efflux protein 2564617..2565240 Roseiflexus sp. RS-1 5209035 YP_001276407.1 CDS RoseRS_2074 NC_009523.1 2565263 2566732 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: GAF domain protein; GAF sensor signal transduction histidine kinase complement(2565263..2566732) Roseiflexus sp. RS-1 5209036 YP_001276408.1 CDS RoseRS_2075 NC_009523.1 2567164 2568645 D hypothetical protein 2567164..2568645 Roseiflexus sp. RS-1 5209037 YP_001276409.1 CDS RoseRS_2076 NC_009523.1 2568794 2569216 D hypothetical protein 2568794..2569216 Roseiflexus sp. RS-1 5209038 YP_001276410.1 CDS RoseRS_2077 NC_009523.1 2569502 2569861 D hypothetical protein 2569502..2569861 Roseiflexus sp. RS-1 5209039 YP_001276411.1 CDS RoseRS_2078 NC_009523.1 2569865 2570227 D hypothetical protein 2569865..2570227 Roseiflexus sp. RS-1 5209040 YP_001276412.1 CDS RoseRS_2079 NC_009523.1 2570371 2570823 D hypothetical protein 2570371..2570823 Roseiflexus sp. RS-1 5209041 YP_001276413.1 CDS RoseRS_2081 NC_009523.1 2572113 2572394 D hypothetical protein 2572113..2572394 Roseiflexus sp. RS-1 5209043 YP_001276414.1 CDS RoseRS_2082 NC_009523.1 2572801 2573967 R PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(2572801..2573967) Roseiflexus sp. RS-1 5209044 YP_001276415.1 CDS RoseRS_2083 NC_009523.1 2573970 2575196 R hypothetical protein complement(2573970..2575196) Roseiflexus sp. RS-1 5209045 YP_001276416.1 CDS RoseRS_2084 NC_009523.1 2575292 2577067 R PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2575292..2577067) Roseiflexus sp. RS-1 5209046 YP_001276417.1 CDS RoseRS_2085 NC_009523.1 2577307 2577477 R hypothetical protein complement(2577307..2577477) Roseiflexus sp. RS-1 5209047 YP_001276418.1 CDS RoseRS_2086 NC_009523.1 2577777 2578007 D PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator 2577777..2578007 Roseiflexus sp. RS-1 5209048 YP_001276419.1 CDS RoseRS_2087 NC_009523.1 2578122 2578790 D PFAM: TrkA-N domain protein; TrkA-C domain protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; TrkA domain-containing protein 2578122..2578790 Roseiflexus sp. RS-1 5209049 YP_001276420.1 CDS RoseRS_2088 NC_009523.1 2578787 2580148 D PFAM: cation transporter; H(+)-transporting two-sector ATPase 2578787..2580148 Roseiflexus sp. RS-1 5209050 YP_001276421.1 CDS RoseRS_2089 NC_009523.1 2580552 2581310 D PFAM: protein of unknown function DUF81; hypothetical protein 2580552..2581310 Roseiflexus sp. RS-1 5209051 YP_001276422.1 CDS RoseRS_2090 NC_009523.1 2581364 2582383 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(2581364..2582383) Roseiflexus sp. RS-1 5209052 YP_001276423.1 CDS RoseRS_2091 NC_009523.1 2582627 2584774 D PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; 5-oxoprolinase 2582627..2584774 Roseiflexus sp. RS-1 5209053 YP_001276424.1 CDS RoseRS_2092 NC_009523.1 2584826 2587036 D PFAM: Hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase 2584826..2587036 Roseiflexus sp. RS-1 5209054 YP_001276425.1 CDS RoseRS_2093 NC_009523.1 2587054 2587542 D acetone carboxylase subunit gamma-like protein 2587054..2587542 Roseiflexus sp. RS-1 5209055 YP_001276426.1 CDS RoseRS_2094 NC_009523.1 2587725 2589287 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2587725..2589287 Roseiflexus sp. RS-1 5209056 YP_001276427.1 CDS RoseRS_2096 NC_009523.1 2589986 2590405 R TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG complement(2589986..2590405) Roseiflexus sp. RS-1 5209058 YP_001276428.1 CDS RoseRS_2097 NC_009523.1 2590402 2590665 R PFAM: multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F complement(2590402..2590665) Roseiflexus sp. RS-1 5209059 YP_001276429.1 CDS RoseRS_2098 NC_009523.1 2590665 2591135 R subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit E complement(2590665..2591135) Roseiflexus sp. RS-1 5209060 YP_001276430.1 CDS RoseRS_2099 NC_009523.1 2591148 2592644 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) complement(2591148..2592644) Roseiflexus sp. RS-1 5209061 YP_001276431.1 CDS RoseRS_2100 NC_009523.1 2592694 2593041 R subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C complement(2592694..2593041) Roseiflexus sp. RS-1 5209062 YP_001276432.1 CDS RoseRS_2101 NC_009523.1 2593046 2593462 R subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit B complement(2593046..2593462) Roseiflexus sp. RS-1 5209063 YP_001276433.1 CDS RoseRS_2102 NC_009523.1 2593474 2595855 R PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) complement(2593474..2595855) Roseiflexus sp. RS-1 5209064 YP_001276434.1 CDS RoseRS_2103 NC_009523.1 2596630 2597253 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 2596630..2597253 Roseiflexus sp. RS-1 5209065 YP_001276435.1 CDS RoseRS_2104 NC_009523.1 2597304 2598929 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 2597304..2598929 Roseiflexus sp. RS-1 5209066 YP_001276436.1 CDS RoseRS_2105 NC_009523.1 2599015 2599812 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2599015..2599812 Roseiflexus sp. RS-1 5209067 YP_001276437.1 CDS RoseRS_2106 NC_009523.1 2599809 2600744 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2599809..2600744 Roseiflexus sp. RS-1 5209068 YP_001276438.1 CDS RoseRS_2107 NC_009523.1 2600741 2601616 D PFAM: UspA domain protein; UspA domain-containing protein 2600741..2601616 Roseiflexus sp. RS-1 5209069 YP_001276439.1 CDS RoseRS_2108 NC_009523.1 2601729 2602706 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2601729..2602706 Roseiflexus sp. RS-1 5209070 YP_001276440.1 CDS RoseRS_2109 NC_009523.1 2603007 2604110 D PFAM: protein of unknown function DUF59; hypothetical protein 2603007..2604110 Roseiflexus sp. RS-1 5209071 YP_001276441.1 CDS RoseRS_2110 NC_009523.1 2604126 2605196 D TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 2604126..2605196 Roseiflexus sp. RS-1 5209072 YP_001276442.1 CDS RoseRS_2111 NC_009523.1 2605352 2605801 D TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein 2605352..2605801 Roseiflexus sp. RS-1 5209073 YP_001276443.1 CDS RoseRS_2112 NC_009523.1 2605881 2606225 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 2605881..2606225 Roseiflexus sp. RS-1 5209074 YP_001276444.1 CDS RoseRS_2113 NC_009523.1 2606249 2606638 D PFAM: protein of unknown function DUF309; hypothetical protein 2606249..2606638 Roseiflexus sp. RS-1 5209075 YP_001276445.1 CDS RoseRS_2114 NC_009523.1 2606631 2607461 D PFAM: UbiE/COQ5 methyltransferase; protein of unknown function DUF343; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 2606631..2607461 Roseiflexus sp. RS-1 5209076 YP_001276446.1 CDS RoseRS_2115 NC_009523.1 2607461 2608348 D hypothetical protein 2607461..2608348 Roseiflexus sp. RS-1 5209077 YP_001276447.1 CDS RoseRS_2116 NC_009523.1 2608455 2609414 D PFAM: regulatory protein, MerR; cobalamin B12-binding domain protein; regulatory protein MerR 2608455..2609414 Roseiflexus sp. RS-1 5209078 YP_001276448.1 CDS RoseRS_2117 NC_009523.1 2609691 2610704 D PFAM: Squalene/phytoene synthase; squalene/phytoene synthase 2609691..2610704 Roseiflexus sp. RS-1 5209079 YP_001276449.1 CDS RoseRS_2118 NC_009523.1 2610849 2611781 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; domain of unknown function DUF1731; hypothetical protein 2610849..2611781 Roseiflexus sp. RS-1 5209080 YP_001276450.1 CDS RoseRS_2119 NC_009523.1 2611795 2613051 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; 2-alkenal reductase 2611795..2613051 Roseiflexus sp. RS-1 5209081 YP_001276451.1 CDS aat NC_009523.1 2613052 2613645 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(2613052..2613645) Roseiflexus sp. RS-1 5209082 YP_001276452.1 CDS RoseRS_2121 NC_009523.1 2613823 2615121 R SMART: AAA ATPase; ATPase AAA complement(2613823..2615121) Roseiflexus sp. RS-1 5209083 YP_001276453.1 CDS RoseRS_2122 NC_009523.1 2615210 2615938 R hypothetical protein complement(2615210..2615938) Roseiflexus sp. RS-1 5209084 YP_001276454.1 CDS RoseRS_2123 NC_009523.1 2616345 2616995 R PFAM: lipolytic enzyme, G-D-S-L family; GDSL family lipase complement(2616345..2616995) Roseiflexus sp. RS-1 5209085 YP_001276455.1 CDS RoseRS_2124 NC_009523.1 2617094 2617723 D PFAM: peptidase S16, lon domain protein; peptidase S16, lon domain-containing protein 2617094..2617723 Roseiflexus sp. RS-1 5209086 YP_001276456.1 CDS RoseRS_2125 NC_009523.1 2617708 2619114 R PFAM: AAA-4 family protein; putative transcriptional regulator complement(2617708..2619114) Roseiflexus sp. RS-1 5209087 YP_001276457.1 CDS RoseRS_2126 NC_009523.1 2619196 2619615 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2619196..2619615 Roseiflexus sp. RS-1 5209088 YP_001276458.1 CDS RoseRS_2127 NC_009523.1 2619718 2620290 D hypothetical protein 2619718..2620290 Roseiflexus sp. RS-1 5209089 YP_001276459.1 CDS RoseRS_2128 NC_009523.1 2620316 2620714 D hypothetical protein 2620316..2620714 Roseiflexus sp. RS-1 5209090 YP_001276460.1 CDS RoseRS_2129 NC_009523.1 2620950 2622413 D hypothetical protein 2620950..2622413 Roseiflexus sp. RS-1 5209091 YP_001276461.1 CDS RoseRS_2130 NC_009523.1 2622683 2623508 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(join(2622683..2623108,2623110..2623508)) Roseiflexus sp. RS-1 5209092 YP_001276462.1 CDS RoseRS_2131 NC_009523.1 2624147 2624626 R TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase SixA complement(2624147..2624626) Roseiflexus sp. RS-1 5209093 YP_001276463.1 CDS guaA NC_009523.1 2624717 2626255 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2624717..2626255 Roseiflexus sp. RS-1 5209094 YP_001276464.1 CDS RoseRS_2133 NC_009523.1 2626389 2627147 D TIGRFAM: DNA binding domain, excisionase family; DNA binding domain-containing protein 2626389..2627147 Roseiflexus sp. RS-1 5209095 YP_001276465.1 CDS RoseRS_2134 NC_009523.1 2627199 2630273 D PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; hypothetical protein 2627199..2630273 Roseiflexus sp. RS-1 5209096 YP_001276466.1 CDS RoseRS_2135 NC_009523.1 2630754 2631698 D TIGRFAM: mevalonate kinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; mevalonate kinase 2630754..2631698 Roseiflexus sp. RS-1 5209097 YP_001276467.1 CDS mnmA NC_009523.1 2631811 2632932 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2631811..2632932 Roseiflexus sp. RS-1 5209098 YP_001276468.1 CDS RoseRS_2137 NC_009523.1 2632951 2633199 D hypothetical protein 2632951..2633199 Roseiflexus sp. RS-1 5209099 YP_001276469.1 CDS RoseRS_2138 NC_009523.1 2633262 2633705 D hypothetical protein 2633262..2633705 Roseiflexus sp. RS-1 5209100 YP_001276470.1 CDS RoseRS_2139 NC_009523.1 2633866 2634807 D PFAM: protein of unknown function DUF1385; hypothetical protein 2633866..2634807 Roseiflexus sp. RS-1 5209101 YP_001276471.1 CDS RoseRS_2140 NC_009523.1 2634837 2635658 D hypothetical protein 2634837..2635658 Roseiflexus sp. RS-1 5209102 YP_001276472.1 CDS RoseRS_2141 NC_009523.1 2635685 2636215 D TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function, ATP binding; Miro domain protein; small GTP-binding protein 2635685..2636215 Roseiflexus sp. RS-1 5209103 YP_001276473.1 CDS RoseRS_2142 NC_009523.1 2636274 2636525 D hypothetical protein 2636274..2636525 Roseiflexus sp. RS-1 5209104 YP_001276474.1 CDS RoseRS_2143 NC_009523.1 2636547 2637473 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 2636547..2637473 Roseiflexus sp. RS-1 5209105 YP_001276475.1 CDS RoseRS_2144 NC_009523.1 2638175 2639680 D PFAM: protein of unknown function DUF512; hypothetical protein 2638175..2639680 Roseiflexus sp. RS-1 5209106 YP_001276476.1 CDS RoseRS_2145 NC_009523.1 2639714 2641411 D PFAM: GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2639714..2641411 Roseiflexus sp. RS-1 5209107 YP_001276477.1 CDS engA NC_009523.1 2641416 2642897 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2641416..2642897 Roseiflexus sp. RS-1 5209108 YP_001276478.1 CDS RoseRS_2147 NC_009523.1 2642900 2643313 R PFAM: Forkhead-associated protein; FHA domain-containing protein complement(2642900..2643313) Roseiflexus sp. RS-1 5209109 YP_001276479.1 CDS RoseRS_2148 NC_009523.1 2643378 2644370 R pyruvate-formate lyase-activating enzyme-like protein complement(2643378..2644370) Roseiflexus sp. RS-1 5209110 YP_001276480.1 CDS RoseRS_2149 NC_009523.1 2644519 2645250 D TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 2644519..2645250 Roseiflexus sp. RS-1 5209111 YP_001276481.1 CDS RoseRS_2150 NC_009523.1 2645272 2646465 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2645272..2646465 Roseiflexus sp. RS-1 5209112 YP_001276482.1 CDS RoseRS_2152 NC_009523.1 2647239 2648417 R hypothetical protein complement(2647239..2648417) Roseiflexus sp. RS-1 5209114 YP_001276483.1 CDS RoseRS_2153 NC_009523.1 2648539 2649735 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2648539..2649735 Roseiflexus sp. RS-1 5209115 YP_001276484.1 CDS RoseRS_2154 NC_009523.1 2649741 2652866 R PFAM: protein kinase; WD-40 repeat protein; SMART: serine/threonine protein kinase; Pyrrolo-quinoline quinone; WD-40 repeat-containing protein complement(2649741..2652866) Roseiflexus sp. RS-1 5209116 YP_001276485.1 CDS RoseRS_2155 NC_009523.1 2652899 2654560 R TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; phytoene dehydrogenase-like protein complement(2652899..2654560) Roseiflexus sp. RS-1 5209117 YP_001276486.1 CDS RoseRS_2156 NC_009523.1 2654819 2655382 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase 2654819..2655382 Roseiflexus sp. RS-1 5209118 YP_001276487.1 CDS RoseRS_2157 NC_009523.1 2655403 2655822 D PFAM: protein of unknown function UPF0047; hypothetical protein 2655403..2655822 Roseiflexus sp. RS-1 5209119 YP_001276488.1 CDS RoseRS_2158 NC_009523.1 2655897 2657216 R PFAM: protein of unknown function DUF1501; hypothetical protein complement(2655897..2657216) Roseiflexus sp. RS-1 5209120 YP_001276489.1 CDS RoseRS_2159 NC_009523.1 2657225 2658922 R hypothetical protein complement(2657225..2658922) Roseiflexus sp. RS-1 5209121 YP_001276490.1 CDS RoseRS_2160 NC_009523.1 2659350 2659700 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 2659350..2659700 Roseiflexus sp. RS-1 5209122 YP_001276491.1 CDS RoseRS_2161 NC_009523.1 2659807 2660559 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; ATP-binding region, ATPase domain protein domain protein; anti-sigma-factor antagonist 2659807..2660559 Roseiflexus sp. RS-1 5209123 YP_001276492.1 CDS RoseRS_2162 NC_009523.1 2660556 2663609 D PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; GAF sensor-containing protein serine phosphatase 2660556..2663609 Roseiflexus sp. RS-1 5209124 YP_001276493.1 CDS RoseRS_2163 NC_009523.1 2663652 2664161 D PFAM: PHA accumulation regulator DNA-binding protein; PHA accumulation regulator DNA-binding protein 2663652..2664161 Roseiflexus sp. RS-1 5209125 YP_001276494.1 CDS RoseRS_2164 NC_009523.1 2664301 2665497 D PFAM: Patatin; patatin 2664301..2665497 Roseiflexus sp. RS-1 5209126 YP_001276495.1 CDS RoseRS_2165 NC_009523.1 2665494 2666699 R PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor, type A; VWA containing CoxE family protein complement(2665494..2666699) Roseiflexus sp. RS-1 5209127 YP_001276496.1 CDS RoseRS_2166 NC_009523.1 2666724 2667614 R PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase complement(2666724..2667614) Roseiflexus sp. RS-1 5209128 YP_001276497.1 CDS RoseRS_2167 NC_009523.1 2667719 2668633 D hypothetical protein 2667719..2668633 Roseiflexus sp. RS-1 5209129 YP_001276498.1 CDS RoseRS_2168 NC_009523.1 2668612 2669133 R PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase complement(2668612..2669133) Roseiflexus sp. RS-1 5209130 YP_001276499.1 CDS RoseRS_2169 NC_009523.1 2669457 2671133 R TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(2669457..2671133) Roseiflexus sp. RS-1 5209131 YP_001276500.1 CDS RoseRS_2170 NC_009523.1 2671203 2672162 D dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein 2671203..2672162 Roseiflexus sp. RS-1 5209132 YP_001276501.1 CDS RoseRS_2171 NC_009523.1 2672239 2672901 R hypothetical protein complement(2672239..2672901) Roseiflexus sp. RS-1 5209133 YP_001276502.1 CDS RoseRS_2172 NC_009523.1 2672923 2673723 R hypothetical protein complement(2672923..2673723) Roseiflexus sp. RS-1 5209134 YP_001276503.1 CDS RoseRS_2173 NC_009523.1 2673720 2675042 R hypothetical protein complement(2673720..2675042) Roseiflexus sp. RS-1 5209135 YP_001276504.1 CDS RoseRS_2174 NC_009523.1 2675039 2675470 R PFAM: HEPN domain protein; HEPN domain-containing protein complement(2675039..2675470) Roseiflexus sp. RS-1 5209136 YP_001276505.1 CDS RoseRS_2175 NC_009523.1 2675830 2677704 D PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 2675830..2677704 Roseiflexus sp. RS-1 5209138 YP_001276506.1 CDS RoseRS_2176 NC_009523.1 2677808 2680234 D hypothetical protein 2677808..2680234 Roseiflexus sp. RS-1 5209139 YP_001276507.1 CDS RoseRS_2177 NC_009523.1 2680241 2681824 D FliA/WhiG family RNA polymerase sigma 28 subunit 2680241..2681824 Roseiflexus sp. RS-1 5209140 YP_001276508.1 CDS RoseRS_2178 NC_009523.1 2681799 2682167 D hypothetical protein 2681799..2682167 Roseiflexus sp. RS-1 5209141 YP_001276509.1 CDS RoseRS_2179 NC_009523.1 2682910 2684076 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2682910..2684076 Roseiflexus sp. RS-1 5209142 YP_001276510.1 CDS RoseRS_2180 NC_009523.1 2684088 2685521 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter complement(2684088..2685521) Roseiflexus sp. RS-1 5209143 YP_001276511.1 CDS RoseRS_2181 NC_009523.1 2685533 2686888 R TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; KH, type 2 domain protein; Miro domain protein; SMART: AAA ATPase; GTP-binding protein Era complement(2685533..2686888) Roseiflexus sp. RS-1 5209144 YP_001276512.1 CDS RoseRS_2182 NC_009523.1 2686920 2687843 R hypothetical protein complement(2686920..2687843) Roseiflexus sp. RS-1 5209145 YP_001276513.1 CDS RoseRS_2183 NC_009523.1 2687843 2688889 R PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(2687843..2688889) Roseiflexus sp. RS-1 5209146 YP_001276514.1 CDS RoseRS_2184 NC_009523.1 2688962 2689846 R hypothetical protein complement(2688962..2689846) Roseiflexus sp. RS-1 5209147 YP_001276515.1 CDS RoseRS_2185 NC_009523.1 2689865 2690581 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; ubiquinone/menaquinone biosynthesis methyltransferase complement(2689865..2690581) Roseiflexus sp. RS-1 5209148 YP_001276516.1 CDS RoseRS_2186 NC_009523.1 2690578 2691345 R TIGRFAM: putative transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor; Baf family transcriptional activator complement(2690578..2691345) Roseiflexus sp. RS-1 5209149 YP_001276517.1 CDS RoseRS_2187 NC_009523.1 2691433 2692395 R PFAM: Asparaginase/glutaminase; asparaginase/glutaminase complement(2691433..2692395) Roseiflexus sp. RS-1 5209150 YP_001276518.1 CDS RoseRS_2188 NC_009523.1 2692402 2693286 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(2692402..2693286) Roseiflexus sp. RS-1 5209151 YP_001276519.1 CDS RoseRS_2189 NC_009523.1 2693379 2694395 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(2693379..2694395) Roseiflexus sp. RS-1 5209152 YP_001276520.1 CDS RoseRS_2190 NC_009523.1 2694483 2700491 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin domain-containing protein complement(2694483..2700491) Roseiflexus sp. RS-1 5209153 YP_001276521.1 CDS RoseRS_2191 NC_009523.1 2700664 2700999 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2700664..2700999 Roseiflexus sp. RS-1 5209154 YP_001276522.1 CDS RoseRS_2192 NC_009523.1 2700980 2701402 D PFAM: HEPN domain protein; HEPN domain-containing protein 2700980..2701402 Roseiflexus sp. RS-1 5209155 YP_001276523.1 CDS RoseRS_2193 NC_009523.1 2701436 2702689 R TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; nuclease SbcCD subunit D complement(2701436..2702689) Roseiflexus sp. RS-1 5209156 YP_001276524.1 CDS RoseRS_2194 NC_009523.1 2703330 2704010 D hypothetical protein 2703330..2704010 Roseiflexus sp. RS-1 5209157 YP_001276525.1 CDS RoseRS_2195 NC_009523.1 2704023 2704721 D PFAM: Allergen V5/Tpx-1 family protein; allergen V5/Tpx-1 family protein 2704023..2704721 Roseiflexus sp. RS-1 5209158 YP_001276526.1 CDS RoseRS_2196 NC_009523.1 2704774 2707674 D TIGRFAM: conserved repeat domain; hypothetical protein 2704774..2707674 Roseiflexus sp. RS-1 5209159 YP_001276527.1 CDS RoseRS_2197 NC_009523.1 2707778 2708686 D PFAM: TadE family protein; TadE family protein 2707778..2708686 Roseiflexus sp. RS-1 5209160 YP_001276528.1 CDS RoseRS_2198 NC_009523.1 2708707 2709240 D hypothetical protein 2708707..2709240 Roseiflexus sp. RS-1 5209161 YP_001276529.1 CDS RoseRS_2199 NC_009523.1 2709289 2710203 D PFAM: SAF domain; SAF domain-containing protein 2709289..2710203 Roseiflexus sp. RS-1 5209162 YP_001276530.1 CDS RoseRS_2200 NC_009523.1 2710240 2711481 D PFAM: type II secretion system protein E; type II secretion system protein E 2710240..2711481 Roseiflexus sp. RS-1 5209163 YP_001276531.1 CDS RoseRS_2201 NC_009523.1 2711634 2712884 D chromosome partitioning ATPase 2711634..2712884 Roseiflexus sp. RS-1 5209164 YP_001276532.1 CDS RoseRS_2202 NC_009523.1 2712894 2714981 D PFAM: type II secretion system protein E; type II secretion system protein E 2712894..2714981 Roseiflexus sp. RS-1 5209165 YP_001276533.1 CDS RoseRS_2203 NC_009523.1 2714997 2715947 D hypothetical protein 2714997..2715947 Roseiflexus sp. RS-1 5209166 YP_001276534.1 CDS RoseRS_2204 NC_009523.1 2715970 2716761 D hypothetical protein 2715970..2716761 Roseiflexus sp. RS-1 5209167 YP_001276535.1 CDS RoseRS_2205 NC_009523.1 2716775 2717485 D hypothetical protein 2716775..2717485 Roseiflexus sp. RS-1 5209168 YP_001276536.1 CDS RoseRS_2206 NC_009523.1 2717585 2719774 D hypothetical protein 2717585..2719774 Roseiflexus sp. RS-1 5209169 YP_001276537.1 CDS RoseRS_2207 NC_009523.1 2719771 2722587 D hypothetical protein 2719771..2722587 Roseiflexus sp. RS-1 5209170 YP_001276538.1 CDS RoseRS_2208 NC_009523.1 2722618 2722950 D hypothetical protein 2722618..2722950 Roseiflexus sp. RS-1 5209171 YP_001276539.1 CDS RoseRS_2209 NC_009523.1 2722964 2723365 D hypothetical protein 2722964..2723365 Roseiflexus sp. RS-1 5209172 YP_001276540.1 CDS RoseRS_2210 NC_009523.1 2723358 2724014 D hypothetical protein 2723358..2724014 Roseiflexus sp. RS-1 5209173 YP_001276541.1 CDS RoseRS_2211 NC_009523.1 2724034 2725890 D Type IV secretory pathway VirB4 components-like protein 2724034..2725890 Roseiflexus sp. RS-1 5209174 YP_001276542.1 CDS RoseRS_2212 NC_009523.1 2725887 2727200 D hypothetical protein 2725887..2727200 Roseiflexus sp. RS-1 5209175 YP_001276543.1 CDS RoseRS_2213 NC_009523.1 2727181 2729067 D hypothetical protein 2727181..2729067 Roseiflexus sp. RS-1 5209176 YP_001276544.1 CDS RoseRS_2214 NC_009523.1 2729214 2730299 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2729214..2730299 Roseiflexus sp. RS-1 5209177 YP_001276545.1 CDS RoseRS_2215 NC_009523.1 2730315 2732435 D PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosylation/crystallin J1 2730315..2732435 Roseiflexus sp. RS-1 5209178 YP_001276546.1 CDS gidB NC_009523.1 2732442 2733146 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(2732442..2733146) Roseiflexus sp. RS-1 5209179 YP_001276547.1 CDS RoseRS_2217 NC_009523.1 2733150 2733749 R TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(2733150..2733749) Roseiflexus sp. RS-1 5209180 YP_001276548.1 CDS RoseRS_2218 NC_009523.1 2733746 2733997 R hypothetical protein complement(2733746..2733997) Roseiflexus sp. RS-1 5209181 YP_001276549.1 CDS RoseRS_2219 NC_009523.1 2734003 2734956 R hypothetical protein complement(2734003..2734956) Roseiflexus sp. RS-1 5209182 YP_001276550.1 CDS RoseRS_2220 NC_009523.1 2734977 2735537 R hypothetical protein complement(2734977..2735537) Roseiflexus sp. RS-1 5209183 YP_001276551.1 CDS RoseRS_2221 NC_009523.1 2735809 2736741 R PFAM: band 7 protein; hypothetical protein complement(2735809..2736741) Roseiflexus sp. RS-1 5209184 YP_001276552.1 CDS RoseRS_2222 NC_009523.1 2736738 2737718 R PFAM: band 7 protein; hypothetical protein complement(2736738..2737718) Roseiflexus sp. RS-1 5209185 YP_001276553.1 CDS RoseRS_2223 NC_009523.1 2737868 2738605 D PFAM: protein of unknown function DUF820; hypothetical protein 2737868..2738605 Roseiflexus sp. RS-1 5209186 YP_001276554.1 CDS RoseRS_2224 NC_009523.1 2738592 2740571 D PFAM: UvrD/REP helicase; UvrD/REP helicase 2738592..2740571 Roseiflexus sp. RS-1 5209187 YP_001276555.1 CDS RoseRS_2225 NC_009523.1 2740617 2741438 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2740617..2741438 Roseiflexus sp. RS-1 5209188 YP_001276556.1 CDS RoseRS_2226 NC_009523.1 2741498 2741935 D hypothetical protein 2741498..2741935 Roseiflexus sp. RS-1 5209189 YP_001276557.1 CDS RoseRS_2227 NC_009523.1 2742093 2743580 D hypothetical protein 2742093..2743580 Roseiflexus sp. RS-1 5209190 YP_001276558.1 CDS RoseRS_2229 NC_009523.1 2744271 2745773 D PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 2744271..2745773 Roseiflexus sp. RS-1 5209192 YP_001276559.1 CDS RoseRS_2230 NC_009523.1 2745970 2747466 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N complement(2745970..2747466) Roseiflexus sp. RS-1 5209193 YP_001276560.1 CDS RoseRS_2231 NC_009523.1 2747523 2749046 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M complement(2747523..2749046) Roseiflexus sp. RS-1 5209194 YP_001276561.1 CDS RoseRS_2232 NC_009523.1 2749052 2751016 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L complement(2749052..2751016) Roseiflexus sp. RS-1 5209195 YP_001276562.1 CDS RoseRS_2233 NC_009523.1 2751088 2751390 R PFAM: NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase, chain 4L complement(2751088..2751390) Roseiflexus sp. RS-1 5209196 YP_001276563.1 CDS RoseRS_2234 NC_009523.1 2751486 2751995 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 complement(2751486..2751995) Roseiflexus sp. RS-1 5209197 YP_001276564.1 CDS RoseRS_2235 NC_009523.1 2752009 2752506 R TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH-quinone oxidoreductase subunit I complement(2752009..2752506) Roseiflexus sp. RS-1 5209198 YP_001276565.1 CDS RoseRS_2236 NC_009523.1 2752580 2753755 R PFAM: respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) complement(2752580..2753755) Roseiflexus sp. RS-1 5209199 YP_001276566.1 CDS RoseRS_2237 NC_009523.1 2753752 2756508 R TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; NADH-quinone oxidoreductase subunit G complement(2753752..2756508) Roseiflexus sp. RS-1 5209200 YP_001276567.1 CDS RoseRS_2238 NC_009523.1 2756785 2758134 R TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH-quinone oxidoreductase subunit F complement(2756785..2758134) Roseiflexus sp. RS-1 5209201 YP_001276568.1 CDS RoseRS_2239 NC_009523.1 2758392 2759612 D hypothetical protein 2758392..2759612 Roseiflexus sp. RS-1 5209202 YP_001276569.1 CDS RoseRS_2240 NC_009523.1 2759675 2761540 R hypothetical protein complement(2759675..2761540) Roseiflexus sp. RS-1 5209203 YP_001276570.1 CDS RoseRS_2241 NC_009523.1 2761610 2762647 R PFAM: protein of unknown function DUF820; hypothetical protein complement(2761610..2762647) Roseiflexus sp. RS-1 5209204 YP_001276571.1 CDS RoseRS_2242 NC_009523.1 2762864 2764162 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 2762864..2764162 Roseiflexus sp. RS-1 5209205 YP_001276572.1 CDS RoseRS_2243 NC_009523.1 2764240 2765646 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 2764240..2765646 Roseiflexus sp. RS-1 5209206 YP_001276573.1 CDS RoseRS_2244 NC_009523.1 2765757 2766497 D hypothetical protein 2765757..2766497 Roseiflexus sp. RS-1 5209207 YP_001276574.1 CDS RoseRS_2245 NC_009523.1 2766611 2766952 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2766611..2766952 Roseiflexus sp. RS-1 5209208 YP_001276575.1 CDS RoseRS_2246 NC_009523.1 2766955 2768037 R putative virion core protein (lumpy skin disease virus)-like protein complement(2766955..2768037) Roseiflexus sp. RS-1 5209209 YP_001276576.1 CDS RoseRS_2247 NC_009523.1 2768251 2769060 R PFAM: aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase complement(2768251..2769060) Roseiflexus sp. RS-1 5209210 YP_001276577.1 CDS RoseRS_2248 NC_009523.1 2769154 2770137 R PFAM: UbiA prenyltransferase; UbiA prenyltransferase complement(2769154..2770137) Roseiflexus sp. RS-1 5209211 YP_001276578.1 CDS RoseRS_2249 NC_009523.1 2770268 2770882 D TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 2770268..2770882 Roseiflexus sp. RS-1 5209212 YP_001276579.1 CDS RoseRS_2250 NC_009523.1 2770958 2772568 D hypothetical protein 2770958..2772568 Roseiflexus sp. RS-1 5209213 YP_001276580.1 CDS RoseRS_2251 NC_009523.1 2772688 2773869 D hypothetical protein 2772688..2773869 Roseiflexus sp. RS-1 5209214 YP_001276581.1 CDS RoseRS_2252 NC_009523.1 2773897 2774535 D hypothetical protein 2773897..2774535 Roseiflexus sp. RS-1 5209215 YP_001276582.1 CDS RoseRS_2253 NC_009523.1 2774532 2774930 D hypothetical protein 2774532..2774930 Roseiflexus sp. RS-1 5209216 YP_001276583.1 CDS RoseRS_2254 NC_009523.1 2774923 2775660 D hypothetical protein 2774923..2775660 Roseiflexus sp. RS-1 5209217 YP_001276584.1 CDS RoseRS_2255 NC_009523.1 2775730 2776932 D hypothetical protein 2775730..2776932 Roseiflexus sp. RS-1 5209218 YP_001276585.1 CDS RoseRS_2256 NC_009523.1 2776947 2778902 D PFAM: protein of unknown function DUF87; hypothetical protein 2776947..2778902 Roseiflexus sp. RS-1 5209219 YP_001276586.1 CDS RoseRS_2257 NC_009523.1 2779011 2780207 D PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-32 subunit RpoH 2779011..2780207 Roseiflexus sp. RS-1 5209220 YP_001276587.1 CDS RoseRS_2258 NC_009523.1 2780213 2782906 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 2780213..2782906 Roseiflexus sp. RS-1 5209221 YP_001276588.1 CDS RoseRS_2259 NC_009523.1 2783054 2785186 R PFAM: UvrD/REP helicase; UvrD/REP helicase complement(2783054..2785186) Roseiflexus sp. RS-1 5209222 YP_001276589.1 CDS RoseRS_2260 NC_009523.1 2785426 2786049 D PFAM: protein of unknown function DUF820; hypothetical protein 2785426..2786049 Roseiflexus sp. RS-1 5209223 YP_001276590.1 CDS RoseRS_2261 NC_009523.1 2786232 2786621 D hypothetical protein 2786232..2786621 Roseiflexus sp. RS-1 5209224 YP_001276591.1 CDS hppA NC_009523.1 2786740 2789079 R pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase complement(2786740..2789079) Roseiflexus sp. RS-1 5209225 YP_001276592.1 CDS RoseRS_2263 NC_009523.1 2789624 2790727 D PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region; cytochrome c oxidase subunit II 2789624..2790727 Roseiflexus sp. RS-1 5209226 YP_001276593.1 CDS RoseRS_2264 NC_009523.1 2790746 2792671 D PFAM: cytochrome c oxidase, subunit I; cytochrome-c oxidase 2790746..2792671 Roseiflexus sp. RS-1 5209227 YP_001276594.1 CDS RoseRS_2265 NC_009523.1 2792696 2793304 D PFAM: cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 2792696..2793304 Roseiflexus sp. RS-1 5209228 YP_001276595.1 CDS RoseRS_2266 NC_009523.1 2793320 2793649 D TIGRFAM: caa(3)-type oxidase, subunit IV; caa(3)-type oxidase subunit IV 2793320..2793649 Roseiflexus sp. RS-1 5209229 YP_001276596.1 CDS RoseRS_2267 NC_009523.1 2793662 2794459 D hypothetical protein 2793662..2794459 Roseiflexus sp. RS-1 5209230 YP_001276597.1 CDS RoseRS_2268 NC_009523.1 2794504 2794839 R PFAM: Cupin 2, conserved barrel domain protein; cupin complement(2794504..2794839) Roseiflexus sp. RS-1 5209231 YP_001276598.1 CDS RoseRS_2269 NC_009523.1 2794988 2795569 D hypothetical protein 2794988..2795569 Roseiflexus sp. RS-1 5209232 YP_001276599.1 CDS RoseRS_2270 NC_009523.1 2795661 2797520 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2795661..2797520) Roseiflexus sp. RS-1 5209233 YP_001276600.1 CDS RoseRS_2271 NC_009523.1 2797726 2798457 R protein tyrosine/serine phosphatase complement(2797726..2798457) Roseiflexus sp. RS-1 5209234 YP_001276601.1 CDS RoseRS_2272 NC_009523.1 2798454 2800295 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2798454..2800295) Roseiflexus sp. RS-1 5209235 YP_001276602.1 CDS RoseRS_2273 NC_009523.1 2800426 2801742 R PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein complement(2800426..2801742) Roseiflexus sp. RS-1 5209236 YP_001276603.1 CDS RoseRS_2274 NC_009523.1 2801743 2803017 R PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein complement(2801743..2803017) Roseiflexus sp. RS-1 5209237 YP_001276604.1 CDS RoseRS_2275 NC_009523.1 2808874 2809347 D hypothetical protein 2808874..2809347 Roseiflexus sp. RS-1 5209242 YP_001276605.1 CDS RoseRS_2276 NC_009523.1 2809397 2810446 D PFAM: putative RNA methylase; Methyltransferase type 11; putative RNA methylase 2809397..2810446 Roseiflexus sp. RS-1 5209243 YP_001276606.1 CDS RoseRS_2277 NC_009523.1 2810433 2812148 R PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; proline--tRNA ligase complement(2810433..2812148) Roseiflexus sp. RS-1 5209244 YP_001276607.1 CDS RoseRS_2278 NC_009523.1 2812341 2812817 R hypothetical protein complement(2812341..2812817) Roseiflexus sp. RS-1 5209245 YP_001276608.1 CDS RoseRS_2279 NC_009523.1 2813022 2815124 D PFAM: protein of unknown function DUF255; hypothetical protein 2813022..2815124 Roseiflexus sp. RS-1 5209246 YP_001276609.1 CDS RoseRS_2280 NC_009523.1 2815368 2816330 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(2815368..2816330) Roseiflexus sp. RS-1 5209247 YP_001276610.1 CDS RoseRS_2281 NC_009523.1 2816525 2817487 R PFAM: transposase, IS111A/IS1328/IS1533; transposase, IS111A/IS1328/IS1533 complement(2816525..2817487) Roseiflexus sp. RS-1 5209248 YP_001276611.1 CDS RoseRS_2282 NC_009523.1 2817791 2818222 D hypothetical protein 2817791..2818222 Roseiflexus sp. RS-1 5209249 YP_001276612.1 CDS RoseRS_2283 NC_009523.1 2818235 2819962 R TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein, Chlamydia; polymorphic outer membrane protein complement(2818235..2819962) Roseiflexus sp. RS-1 5209250 YP_001276613.1 CDS RoseRS_2284 NC_009523.1 2820202 2821554 D hypothetical protein 2820202..2821554 Roseiflexus sp. RS-1 5209251 YP_001276614.1 CDS RoseRS_2285 NC_009523.1 2821562 2822590 R PFAM: C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein complement(2821562..2822590) Roseiflexus sp. RS-1 5209252 YP_001276615.1 CDS RoseRS_2286 NC_009523.1 2822704 2824128 R PFAM: amino acid-binding ACT domain protein; malic enzyme domain protein; malic enzyme, NAD-binding; malate dehydrogenase complement(2822704..2824128) Roseiflexus sp. RS-1 5209253 YP_001276616.1 CDS RoseRS_2287 NC_009523.1 2824222 2825217 R PFAM: helix-turn-helix domain protein; peptidase M23B; peptidase M23B complement(2824222..2825217) Roseiflexus sp. RS-1 5209254 YP_001276617.1 CDS RoseRS_2288 NC_009523.1 2825796 2826758 D PFAM: transposase, IS111A/IS1328/IS1533; transposase, IS111A/IS1328/IS1533 2825796..2826758 Roseiflexus sp. RS-1 5209255 YP_001276618.1 CDS RoseRS_2289 NC_009523.1 2827118 2827873 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(2827118..2827873) Roseiflexus sp. RS-1 5209256 YP_001276619.1 CDS RoseRS_2290 NC_009523.1 2828111 2828785 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 2828111..2828785 Roseiflexus sp. RS-1 5209257 YP_001276620.1 CDS RoseRS_2291 NC_009523.1 2828981 2830255 D PFAM: protein of unknown function UPF0118; hypothetical protein 2828981..2830255 Roseiflexus sp. RS-1 5209258 YP_001276621.1 CDS RoseRS_2292 NC_009523.1 2830358 2830915 D hypothetical protein 2830358..2830915 Roseiflexus sp. RS-1 5209259 YP_001276622.1 CDS RoseRS_2293 NC_009523.1 2831363 2833036 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2831363..2833036) Roseiflexus sp. RS-1 5209260 YP_001276623.1 CDS RoseRS_2294 NC_009523.1 2833134 2834279 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(2833134..2834279) Roseiflexus sp. RS-1 5209261 YP_001276624.1 CDS RoseRS_2295 NC_009523.1 2834595 2837312 R TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(2834595..2837312) Roseiflexus sp. RS-1 5209262 YP_001276625.1 CDS RoseRS_2296 NC_009523.1 2837333 2837908 R PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; stage II sporulation E family protein complement(2837333..2837908) Roseiflexus sp. RS-1 5209263 YP_001276626.1 CDS RoseRS_2297 NC_009523.1 2837905 2838336 R PFAM: ATP-binding region, ATPase domain protein domain protein; putative anti-sigma regulatory factor complement(2837905..2838336) Roseiflexus sp. RS-1 5209264 YP_001276627.1 CDS RoseRS_2298 NC_009523.1 2838714 2839700 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha complement(2838714..2839700) Roseiflexus sp. RS-1 5209265 YP_001276628.1 CDS RoseRS_2299 NC_009523.1 2839714 2840490 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta complement(2839714..2840490) Roseiflexus sp. RS-1 5209266 YP_001276629.1 CDS RoseRS_2300 NC_009523.1 2840599 2841843 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(2840599..2841843) Roseiflexus sp. RS-1 5209267 YP_001276630.1 CDS RoseRS_2301 NC_009523.1 2842043 2843404 R major facilitator superfamily permease complement(2842043..2843404) Roseiflexus sp. RS-1 5209268 YP_001276631.1 CDS RoseRS_2302 NC_009523.1 2843438 2844223 R PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(2843438..2844223) Roseiflexus sp. RS-1 5209269 YP_001276632.1 CDS RoseRS_2303 NC_009523.1 2844509 2845273 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 2844509..2845273 Roseiflexus sp. RS-1 5209270 YP_001276633.1 CDS RoseRS_2304 NC_009523.1 2845425 2847464 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; nitrogen specific signal transduction histidine kinase NtrB 2845425..2847464 Roseiflexus sp. RS-1 5209271 YP_001276634.1 CDS RoseRS_2305 NC_009523.1 2847548 2848339 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 2847548..2848339 Roseiflexus sp. RS-1 5209272 YP_001276635.1 CDS RoseRS_2306 NC_009523.1 2848520 2849107 D hypothetical protein 2848520..2849107 Roseiflexus sp. RS-1 5209273 YP_001276636.1 CDS RoseRS_2307 NC_009523.1 2849179 2850498 D PFAM: periplasmic binding protein/LacI transcriptional regulator; Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 2849179..2850498 Roseiflexus sp. RS-1 5209274 YP_001276637.1 CDS RoseRS_2308 NC_009523.1 2850510 2851667 R PFAM: CBS domain containing protein; peptidase M50; peptidase M50 complement(2850510..2851667) Roseiflexus sp. RS-1 5209275 YP_001276638.1 CDS RoseRS_2309 NC_009523.1 2851824 2852819 R hypothetical protein complement(2851824..2852819) Roseiflexus sp. RS-1 5209276 YP_001276639.1 CDS RoseRS_2310 NC_009523.1 2852823 2853020 R hypothetical protein complement(2852823..2853020) Roseiflexus sp. RS-1 5209277 YP_001276640.1 CDS RoseRS_2311 NC_009523.1 2853197 2854264 R PFAM: Aldose 1-epimerase; aldose 1-epimerase complement(2853197..2854264) Roseiflexus sp. RS-1 5209278 YP_001276641.1 CDS RoseRS_2312 NC_009523.1 2854348 2857596 R PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; WD40 domain protein beta Propeller; peptidase S41 complement(2854348..2857596) Roseiflexus sp. RS-1 5209279 YP_001276642.1 CDS RoseRS_2313 NC_009523.1 2857849 2860554 D PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 2857849..2860554 Roseiflexus sp. RS-1 5209280 YP_001276643.1 CDS RoseRS_2314 NC_009523.1 2861548 2861955 D hypothetical protein 2861548..2861955 Roseiflexus sp. RS-1 5209281 YP_001276644.1 CDS RoseRS_2315 NC_009523.1 2862230 2865007 D PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 2862230..2865007 Roseiflexus sp. RS-1 5209282 YP_001276645.1 CDS RoseRS_2316 NC_009523.1 2865020 2866621 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 2865020..2866621 Roseiflexus sp. RS-1 5209283 YP_001276646.1 CDS RoseRS_2317 NC_009523.1 2866624 2869467 D PFAM: protein of unknown function DUF214; hypothetical protein 2866624..2869467 Roseiflexus sp. RS-1 5209284 YP_001276647.1 CDS RoseRS_2318 NC_009523.1 2869728 2871425 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2869728..2871425 Roseiflexus sp. RS-1 5209285 YP_001276648.1 CDS RoseRS_2319 NC_009523.1 2871614 2872861 D TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 2871614..2872861 Roseiflexus sp. RS-1 5209286 YP_001276649.1 CDS RoseRS_2320 NC_009523.1 2872892 2874604 D PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 2872892..2874604 Roseiflexus sp. RS-1 5209287 YP_001276650.1 CDS RoseRS_2321 NC_009523.1 2874613 2875389 D TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; Ni/Fe-hydrogenase, b-type cytochrome subunit 2874613..2875389 Roseiflexus sp. RS-1 5209288 YP_001276651.1 CDS RoseRS_2322 NC_009523.1 2875386 2875886 D TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52, hydrogen uptake protein; hydrogenase expression/formation protein 2875386..2875886 Roseiflexus sp. RS-1 5209289 YP_001276652.1 CDS RoseRS_2323 NC_009523.1 2876823 2878487 D hypothetical protein 2876823..2878487 Roseiflexus sp. RS-1 5209290 YP_001276653.1 CDS RoseRS_2324 NC_009523.1 2878529 2878855 D hypothetical protein 2878529..2878855 Roseiflexus sp. RS-1 5209291 YP_001276654.1 CDS RoseRS_2325 NC_009523.1 2879330 2879827 D hypothetical protein 2879330..2879827 Roseiflexus sp. RS-1 5209292 YP_001276655.1 CDS RoseRS_2326 NC_009523.1 2879891 2880073 D hypothetical protein 2879891..2880073 Roseiflexus sp. RS-1 5209293 YP_001276656.1 CDS RoseRS_2327 NC_009523.1 2880552 2880908 D hypothetical protein 2880552..2880908 Roseiflexus sp. RS-1 5209294 YP_001276657.1 CDS RoseRS_2328 NC_009523.1 2880889 2881323 D PFAM: PilT protein domain protein; PilT domain-containing protein 2880889..2881323 Roseiflexus sp. RS-1 5209295 YP_001276658.1 CDS RoseRS_2329 NC_009523.1 2881454 2881927 D hypothetical protein 2881454..2881927 Roseiflexus sp. RS-1 5209296 YP_001276659.1 CDS RoseRS_2330 NC_009523.1 2882164 2882745 D hypothetical protein 2882164..2882745 Roseiflexus sp. RS-1 5209297 YP_001276660.1 CDS RoseRS_2331 NC_009523.1 2883600 2883854 D hypothetical protein 2883600..2883854 Roseiflexus sp. RS-1 5209298 YP_001276661.1 CDS RoseRS_2332 NC_009523.1 2883847 2884284 D hypothetical protein 2883847..2884284 Roseiflexus sp. RS-1 5209299 YP_001276662.1 CDS RoseRS_2333 NC_009523.1 2884938 2885231 R hypothetical protein complement(2884938..2885231) Roseiflexus sp. RS-1 5209300 YP_001276663.1 CDS RoseRS_2334 NC_009523.1 2885364 2886728 D TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; small GTP-binding protein 2885364..2886728 Roseiflexus sp. RS-1 5209301 YP_001276664.1 CDS RoseRS_2335 NC_009523.1 2886732 2887679 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2886732..2887679 Roseiflexus sp. RS-1 5209302 YP_001276665.1 CDS RoseRS_2336 NC_009523.1 2887845 2888687 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(2887845..2888687) Roseiflexus sp. RS-1 5209303 YP_001276666.1 CDS RoseRS_2337 NC_009523.1 2888816 2890114 R PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(2888816..2890114) Roseiflexus sp. RS-1 5209304 YP_001276667.1 CDS RoseRS_2338 NC_009523.1 2892277 2893002 R PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein complement(2892277..2893002) Roseiflexus sp. RS-1 5209305 YP_001276668.1 CDS RoseRS_2339 NC_009523.1 2892999 2894144 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(2892999..2894144) Roseiflexus sp. RS-1 5209306 YP_001276669.1 CDS RoseRS_2340 NC_009523.1 2894305 2894985 R hypothetical protein complement(2894305..2894985) Roseiflexus sp. RS-1 5209307 YP_001276670.1 CDS RoseRS_2341 NC_009523.1 2894982 2895692 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(2894982..2895692) Roseiflexus sp. RS-1 5209308 YP_001276671.1 CDS RoseRS_2342 NC_009523.1 2895797 2896177 R TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein complement(2895797..2896177) Roseiflexus sp. RS-1 5209309 YP_001276672.1 CDS RoseRS_2343 NC_009523.1 2896427 2899192 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2896427..2899192 Roseiflexus sp. RS-1 5209310 YP_001276673.1 CDS RoseRS_2344 NC_009523.1 2899205 2901757 D TIGRFAM: PAS sensor protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; histidine kinase A domain protein domain protein; PAS/PAC sensor signal transduction histidine kinase 2899205..2901757 Roseiflexus sp. RS-1 5209311 YP_001276674.1 CDS RoseRS_2345 NC_009523.1 2901675 2902732 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(2901675..2902202,2902202..2902732)) Roseiflexus sp. RS-1 5209312 YP_001276675.1 CDS RoseRS_2346 NC_009523.1 2902794 2903912 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase 2902794..2903912 Roseiflexus sp. RS-1 5209313 YP_001276676.1 CDS RoseRS_2347 NC_009523.1 2903909 2904517 D PFAM: response regulator receiver; response regulator receiver protein 2903909..2904517 Roseiflexus sp. RS-1 5209314 YP_001276677.1 CDS RoseRS_2348 NC_009523.1 2904903 2906540 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Polymorphic membrane protein, Chlamydia; hypothetical protein 2904903..2906540 Roseiflexus sp. RS-1 5209317 YP_001276678.1 CDS RoseRS_2349 NC_009523.1 2906586 2907689 D PFAM: cell cycle protein; cell cycle protein 2906586..2907689 Roseiflexus sp. RS-1 5209318 YP_001276679.1 CDS RoseRS_2350 NC_009523.1 2907838 2908422 D PFAM: PspC domain protein; phage shock protein PspC 2907838..2908422 Roseiflexus sp. RS-1 5209319 YP_001276680.1 CDS RoseRS_2351 NC_009523.1 2908430 2909629 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; histidine kinase complement(2908430..2909629) Roseiflexus sp. RS-1 5209320 YP_001276681.1 CDS RoseRS_2352 NC_009523.1 2909746 2910543 R hypothetical protein complement(2909746..2910543) Roseiflexus sp. RS-1 5209321 YP_001276682.1 CDS RoseRS_2354 NC_009523.1 2911204 2914416 R PFAM: transcriptional activator domain; SMART: Tetratricopeptide domain protein; transcriptional activator domain-containing protein complement(2911204..2914416) Roseiflexus sp. RS-1 5209323 YP_001276683.1 CDS RoseRS_2355 NC_009523.1 2914605 2915456 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2914605..2915456 Roseiflexus sp. RS-1 5209324 YP_001276684.1 CDS RoseRS_2356 NC_009523.1 2915478 2916845 D PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; ASPIC/UnbV domain-containing protein 2915478..2916845 Roseiflexus sp. RS-1 5209325 YP_001276685.1 CDS RoseRS_2357 NC_009523.1 2916867 2918072 R hypothetical protein complement(2916867..2918072) Roseiflexus sp. RS-1 5209326 YP_001276686.1 CDS RoseRS_2358 NC_009523.1 2918293 2920602 R hypothetical protein complement(2918293..2920602) Roseiflexus sp. RS-1 5209327 YP_001276687.1 CDS RoseRS_2359 NC_009523.1 2920801 2921835 R TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2920801..2921835) Roseiflexus sp. RS-1 5209328 YP_001276688.1 CDS RoseRS_2360 NC_009523.1 2922101 2922499 R TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; chorismate mutase complement(2922101..2922499) Roseiflexus sp. RS-1 5209329 YP_001276689.1 CDS RoseRS_2361 NC_009523.1 2922727 2923317 R PFAM: response regulator receiver; ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein complement(2922727..2923317) Roseiflexus sp. RS-1 5209330 YP_001276690.1 CDS RoseRS_2362 NC_009523.1 2923494 2924567 R PFAM: beta-lactamase; beta-lactamase complement(2923494..2924567) Roseiflexus sp. RS-1 5209331 YP_001276691.1 CDS RoseRS_2363 NC_009523.1 2924580 2926148 R hypothetical protein complement(2924580..2926148) Roseiflexus sp. RS-1 5209332 YP_001276692.1 CDS RoseRS_2364 NC_009523.1 2926507 2928447 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; multi-sensor signal transduction histidine kinase complement(2926507..2928447) Roseiflexus sp. RS-1 5209333 YP_001276693.1 CDS RoseRS_2365 NC_009523.1 2928586 2929215 D hypothetical protein 2928586..2929215 Roseiflexus sp. RS-1 5209334 YP_001276694.1 CDS RoseRS_2366 NC_009523.1 2929275 2929754 D PFAM: blue (type 1) copper domain protein; blue (type1) copper domain-containing protein 2929275..2929754 Roseiflexus sp. RS-1 5209335 YP_001276695.1 CDS RoseRS_2367 NC_009523.1 2929837 2930880 R PFAM: sugar isomerase (SIS); glutamine--fructose-6-phosphate transaminase complement(2929837..2930880) Roseiflexus sp. RS-1 5209336 YP_001276696.1 CDS RoseRS_2368 NC_009523.1 2931089 2932111 D hypothetical protein 2931089..2932111 Roseiflexus sp. RS-1 5209337 YP_001276697.1 CDS RoseRS_2369 NC_009523.1 2932108 2932980 D putative diguanylate cyclase 2932108..2932980 Roseiflexus sp. RS-1 5209338 YP_001276698.1 CDS RoseRS_2370 NC_009523.1 2933025 2933714 D PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 2933025..2933714 Roseiflexus sp. RS-1 5209339 YP_001276699.1 CDS RoseRS_2371 NC_009523.1 2933714 2935006 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2933714..2935006 Roseiflexus sp. RS-1 5209340 YP_001276700.1 CDS RoseRS_2372 NC_009523.1 2935011 2936162 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2935011..2936162 Roseiflexus sp. RS-1 5209341 YP_001276701.1 CDS RoseRS_2373 NC_009523.1 2936159 2937394 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2936159..2937394 Roseiflexus sp. RS-1 5209342 YP_001276702.1 CDS RoseRS_2374 NC_009523.1 2937422 2938114 D PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 2937422..2938114 Roseiflexus sp. RS-1 5209343 YP_001276703.1 CDS RoseRS_2375 NC_009523.1 2938204 2939706 D PFAM: O-antigen polymerase; O-antigen polymerase 2938204..2939706 Roseiflexus sp. RS-1 5209344 YP_001276704.1 CDS RoseRS_2376 NC_009523.1 2939703 2940632 D hypothetical protein 2939703..2940632 Roseiflexus sp. RS-1 5209345 YP_001276705.1 CDS RoseRS_2377 NC_009523.1 2940718 2942178 D PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; polysaccharide biosynthesis protein 2940718..2942178 Roseiflexus sp. RS-1 5209346 YP_001276706.1 CDS RoseRS_2378 NC_009523.1 2942221 2943216 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2942221..2943216 Roseiflexus sp. RS-1 5209347 YP_001276707.1 CDS RoseRS_2379 NC_009523.1 2943216 2944361 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2943216..2944361 Roseiflexus sp. RS-1 5209348 YP_001276708.1 CDS RoseRS_2380 NC_009523.1 2944377 2945552 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2944377..2945552 Roseiflexus sp. RS-1 5209349 YP_001276709.1 CDS RoseRS_2381 NC_009523.1 2945574 2946167 D catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 2945574..2946167 Roseiflexus sp. RS-1 5209350 YP_001276710.1 CDS RoseRS_2382 NC_009523.1 2946274 2947233 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2946274..2947233 Roseiflexus sp. RS-1 5209351 YP_001276711.1 CDS RoseRS_2383 NC_009523.1 2947275 2948225 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2947275..2948225 Roseiflexus sp. RS-1 5209352 YP_001276712.1 CDS RoseRS_2384 NC_009523.1 2948222 2948992 D TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate cytidylyltransferase 2948222..2948992 Roseiflexus sp. RS-1 5209353 YP_001276713.1 CDS RoseRS_2385 NC_009523.1 2949034 2950083 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 2949034..2950083 Roseiflexus sp. RS-1 5209354 YP_001276714.1 CDS RoseRS_2386 NC_009523.1 2950113 2951345 D PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; C-methyltransferase 2950113..2951345 Roseiflexus sp. RS-1 5209355 YP_001276715.1 CDS RoseRS_2387 NC_009523.1 2951374 2952582 D PFAM: C-methyltransferase; C-methyltransferase 2951374..2952582 Roseiflexus sp. RS-1 5209356 YP_001276716.1 CDS RoseRS_2388 NC_009523.1 2952771 2955203 D PFAM: Fibronectin, type III domain protein; fibronectin, type III domain-containing protein 2952771..2955203 Roseiflexus sp. RS-1 5209357 YP_001276717.1 CDS RoseRS_2390 NC_009523.1 2955763 2956820 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(2955763..2956290,2956290..2956820)) Roseiflexus sp. RS-1 5209359 YP_001276718.1 CDS RoseRS_2391 NC_009523.1 2957477 2958697 D PFAM: Methyltransferase type 11; Methyltransferase type 12; C-methyltransferase; type 12 methyltransferase 2957477..2958697 Roseiflexus sp. RS-1 5209360 YP_001276719.1 CDS RoseRS_2392 NC_009523.1 2958698 2960002 R hypothetical protein complement(2958698..2960002) Roseiflexus sp. RS-1 5209361 YP_001276720.1 CDS RoseRS_2393 NC_009523.1 2960168 2962147 D TIGRFAM: polymorphic outer membrane protein; polymorphic outer membrane protein 2960168..2962147 Roseiflexus sp. RS-1 5209362 YP_001276721.1 CDS RoseRS_2394 NC_009523.1 2962220 2963248 D TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 2962220..2963248 Roseiflexus sp. RS-1 5209363 YP_001276722.1 CDS RoseRS_2395 NC_009523.1 2963263 2964204 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 2963263..2964204 Roseiflexus sp. RS-1 5209364 YP_001276723.1 CDS RoseRS_2396 NC_009523.1 2964210 2965517 D PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; UDP-glucose 6-dehydrogenase 2964210..2965517 Roseiflexus sp. RS-1 5209365 YP_001276724.1 CDS RoseRS_2397 NC_009523.1 2965408 2967786 R hypothetical protein complement(2965408..2967786) Roseiflexus sp. RS-1 5209366 YP_001276725.1 CDS RoseRS_2398 NC_009523.1 2967846 2968595 R TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; succinate dehydrogenase/fumarate reductase iron-sulfur subunit complement(2967846..2968595) Roseiflexus sp. RS-1 5209367 YP_001276726.1 CDS sdhA NC_009523.1 2968686 2970656 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(2968686..2970656) Roseiflexus sp. RS-1 5209368 YP_001276727.1 CDS RoseRS_2400 NC_009523.1 2970716 2971396 R TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase/fumarate reductase cytochrome b subunit complement(2970716..2971396) Roseiflexus sp. RS-1 5209369 YP_001276728.1 CDS RoseRS_2401 NC_009523.1 2971726 2972565 R PFAM: low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase complement(2971726..2972565) Roseiflexus sp. RS-1 5209370 YP_001276729.1 CDS RoseRS_2402 NC_009523.1 2972773 2974626 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 2972773..2974626 Roseiflexus sp. RS-1 5209371 YP_001276730.1 CDS RoseRS_2403 NC_009523.1 2974813 2976180 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(2974813..2976180) Roseiflexus sp. RS-1 5209372 YP_001276731.1 CDS RoseRS_2404 NC_009523.1 2976511 2977128 D PFAM: protein of unknown function DUF820; hypothetical protein 2976511..2977128 Roseiflexus sp. RS-1 5209373 YP_001276732.1 CDS RoseRS_2405 NC_009523.1 2977141 2978082 D TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; ornithine carbamoyltransferase 2977141..2978082 Roseiflexus sp. RS-1 5209374 YP_001276733.1 CDS RoseRS_2406 NC_009523.1 2978092 2978736 D PFAM: TrkA-N domain protein; TrkA-C domain protein; TrkA domain-containing protein 2978092..2978736 Roseiflexus sp. RS-1 5209375 YP_001276734.1 CDS RoseRS_2407 NC_009523.1 2978756 2979418 D PFAM: TrkA-N domain protein; TrkA-C domain protein; TrkA domain-containing protein 2978756..2979418 Roseiflexus sp. RS-1 5209376 YP_001276735.1 CDS RoseRS_2408 NC_009523.1 2979420 2980439 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; magnesium and cobalt transport protein CorA 2979420..2980439 Roseiflexus sp. RS-1 5209377 YP_001276736.1 CDS RoseRS_2409 NC_009523.1 2980477 2981331 D PFAM: protein of unknown function DUF52; hypothetical protein 2980477..2981331 Roseiflexus sp. RS-1 5209378 YP_001276737.1 CDS RoseRS_2410 NC_009523.1 2981401 2981874 D hypothetical protein 2981401..2981874 Roseiflexus sp. RS-1 5209379 YP_001276738.1 CDS RoseRS_2411 NC_009523.1 2981841 2982422 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA complement(2981841..2982422) Roseiflexus sp. RS-1 5209380 YP_001276739.1 CDS RoseRS_2412 NC_009523.1 2982777 2983586 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(2982777..2983586) Roseiflexus sp. RS-1 5209381 YP_001276740.1 CDS RoseRS_2413 NC_009523.1 2983598 2985100 R PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2983598..2985100) Roseiflexus sp. RS-1 5209382 YP_001276741.1 CDS RoseRS_2414 NC_009523.1 2985349 2986986 D PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; GAF sensor signal transduction histidine kinase 2985349..2986986 Roseiflexus sp. RS-1 5209383 YP_001276742.1 CDS RoseRS_2415 NC_009523.1 2987021 2988025 D PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase 2987021..2988025 Roseiflexus sp. RS-1 5209384 YP_001276743.1 CDS RoseRS_2416 NC_009523.1 2988057 2989040 D PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 2988057..2989040 Roseiflexus sp. RS-1 5209385 YP_001276744.1 CDS RoseRS_2417 NC_009523.1 2989053 2990090 D PFAM: conserved hypothetical protein 374; hypothetical protein 2989053..2990090 Roseiflexus sp. RS-1 5209386 YP_001276745.1 CDS RoseRS_2418 NC_009523.1 2990054 2990995 R hypothetical protein complement(2990054..2990995) Roseiflexus sp. RS-1 5209387 YP_001276746.1 CDS RoseRS_2419 NC_009523.1 2991006 2991992 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2991006..2991992) Roseiflexus sp. RS-1 5209388 YP_001276747.1 CDS RoseRS_2420 NC_009523.1 2992069 2993151 D hypothetical protein 2992069..2993151 Roseiflexus sp. RS-1 5209389 YP_001276748.1 CDS RoseRS_2421 NC_009523.1 2993059 2993736 R hypothetical protein complement(2993059..2993736) Roseiflexus sp. RS-1 5209390 YP_001276749.1 CDS RoseRS_2422 NC_009523.1 2993740 2994405 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(2993740..2994405) Roseiflexus sp. RS-1 5209391 YP_001276750.1 CDS RoseRS_2423 NC_009523.1 2994538 2995302 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(2994538..2995302) Roseiflexus sp. RS-1 5209392 YP_001276751.1 CDS RoseRS_2424 NC_009523.1 2995458 2995934 D TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 2995458..2995934 Roseiflexus sp. RS-1 5209393 YP_001276752.1 CDS ruvB NC_009523.1 2995935 2996978 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(2995935..2996978) Roseiflexus sp. RS-1 5209394 YP_001276753.1 CDS RoseRS_2426 NC_009523.1 2997212 2998861 D PFAM: Amidohydrolase 3; amidohydrolase 3 2997212..2998861 Roseiflexus sp. RS-1 5209395 YP_001276754.1 CDS RoseRS_2427 NC_009523.1 2998871 2999749 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2998871..2999749 Roseiflexus sp. RS-1 5209396 YP_001276755.1 CDS RoseRS_2428 NC_009523.1 2999732 3000478 R PFAM: glutamine amidotransferase class-I; peptidase C26; peptidase C26 complement(2999732..3000478) Roseiflexus sp. RS-1 5209397 YP_001276756.1 CDS RoseRS_2429 NC_009523.1 3000573 3001121 D PFAM: NUDIX hydrolase; NUDIX hydrolase 3000573..3001121 Roseiflexus sp. RS-1 5209398 YP_001276757.1 CDS RoseRS_2430 NC_009523.1 3001131 3002228 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(3001131..3002228) Roseiflexus sp. RS-1 5209399 YP_001276758.1 CDS RoseRS_2431 NC_009523.1 3004717 3005457 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3004717..3005457) Roseiflexus sp. RS-1 5209400 YP_001276759.1 CDS RoseRS_2432 NC_009523.1 3005628 3006233 R hypothetical protein complement(3005628..3006233) Roseiflexus sp. RS-1 5209401 YP_001276760.1 CDS RoseRS_2433 NC_009523.1 3006495 3007988 R PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(3006495..3007988) Roseiflexus sp. RS-1 5209402 YP_001276761.1 CDS RoseRS_2434 NC_009523.1 3008034 3008888 R PFAM: Forkhead-associated protein; FHA domain-containing protein complement(3008034..3008888) Roseiflexus sp. RS-1 5209403 YP_001276762.1 CDS RoseRS_2435 NC_009523.1 3009280 3009768 D hypothetical protein 3009280..3009768 Roseiflexus sp. RS-1 5209404 YP_001276763.1 CDS RoseRS_2436 NC_009523.1 3010070 3011266 R TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF complement(3010070..3011266) Roseiflexus sp. RS-1 5209405 YP_001276764.1 CDS RoseRS_2437 NC_009523.1 3011281 3012318 R catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase complement(3011281..3012318) Roseiflexus sp. RS-1 5209406 YP_001276765.1 CDS RoseRS_2438 NC_009523.1 3012694 3013446 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; peptidyl-prolyl isomerase 3012694..3013446 Roseiflexus sp. RS-1 5209407 YP_001276766.1 CDS RoseRS_2439 NC_009523.1 3013449 3015458 R hypothetical protein complement(3013449..3015458) Roseiflexus sp. RS-1 5209408 YP_001276767.1 CDS RoseRS_2440 NC_009523.1 3015478 3016125 R hypothetical protein complement(3015478..3016125) Roseiflexus sp. RS-1 5209409 YP_001276768.1 CDS RoseRS_2441 NC_009523.1 3016122 3016967 R hypothetical protein complement(3016122..3016967) Roseiflexus sp. RS-1 5209410 YP_001276769.1 CDS RoseRS_2442 NC_009523.1 3019197 3019868 R hypothetical protein complement(3019197..3019868) Roseiflexus sp. RS-1 5209411 YP_001276770.1 CDS RoseRS_2443 NC_009523.1 3019883 3020656 R hypothetical protein complement(3019883..3020656) Roseiflexus sp. RS-1 5209412 YP_001276771.1 CDS RoseRS_2444 NC_009523.1 3020732 3020971 R hypothetical protein complement(3020732..3020971) Roseiflexus sp. RS-1 5209413 YP_001276772.1 CDS RoseRS_2445 NC_009523.1 3021073 3021540 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(3021073..3021540) Roseiflexus sp. RS-1 5209414 YP_001276773.1 CDS RoseRS_2446 NC_009523.1 3021543 3021959 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(3021543..3021959) Roseiflexus sp. RS-1 5209415 YP_001276774.1 CDS RoseRS_2447 NC_009523.1 3022128 3024452 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 3022128..3024452 Roseiflexus sp. RS-1 5209416 YP_001276775.1 CDS RoseRS_2448 NC_009523.1 3024526 3025140 D PFAM: SH3, type 3 domain protein; SH3 type 3 domain-containing protein 3024526..3025140 Roseiflexus sp. RS-1 5209417 YP_001276776.1 CDS RoseRS_2449 NC_009523.1 3025183 3026418 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; chromate transporter 3025183..3026418 Roseiflexus sp. RS-1 5209418 YP_001276777.1 CDS RoseRS_2450 NC_009523.1 3026545 3028761 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase 3026545..3028761 Roseiflexus sp. RS-1 5209419 YP_001276778.1 CDS RoseRS_2451 NC_009523.1 3028958 3032566 R PFAM: peptidase C1A, papain; Cna B domain protein; peptidase C1A, papain complement(3028958..3032566) Roseiflexus sp. RS-1 5209420 YP_001276779.1 CDS RoseRS_2452 NC_009523.1 3032951 3037156 D PFAM: Fibronectin, type III domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase catalytic subunit 3032951..3037156 Roseiflexus sp. RS-1 5209421 YP_001276780.1 CDS RoseRS_2453 NC_009523.1 3037371 3037673 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3037371..3037673 Roseiflexus sp. RS-1 5209422 YP_001276781.1 CDS RoseRS_2454 NC_009523.1 3038013 3039497 D hypothetical protein 3038013..3039497 Roseiflexus sp. RS-1 5209423 YP_001276782.1 CDS RoseRS_2455 NC_009523.1 3039867 3040112 D PFAM: PspC domain protein; phage shock protein PspC 3039867..3040112 Roseiflexus sp. RS-1 5209424 YP_001276783.1 CDS RoseRS_2456 NC_009523.1 3040297 3041712 R PFAM: protein of unknown function UPF0089; hypothetical protein complement(3040297..3041712) Roseiflexus sp. RS-1 5209425 YP_001276784.1 CDS RoseRS_2457 NC_009523.1 3041935 3042723 D PFAM: purine or other phosphorylase, family 1; purine phosphorylase family 1 3041935..3042723 Roseiflexus sp. RS-1 5209426 YP_001276785.1 CDS RoseRS_2458 NC_009523.1 3042743 3043420 D hypothetical protein 3042743..3043420 Roseiflexus sp. RS-1 5209427 YP_001276786.1 CDS RoseRS_2459 NC_009523.1 3044333 3045997 D PFAM: cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 3044333..3045997 Roseiflexus sp. RS-1 5209428 YP_001276787.1 CDS RoseRS_2460 NC_009523.1 3046017 3047123 D PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD/NADP octopine/nopaline dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; NAD/NADP octopine/nopaline dehydrogenase 3046017..3047123 Roseiflexus sp. RS-1 5209429 YP_001276788.1 CDS asnB NC_009523.1 3047151 3048647 D functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 3047151..3048647 Roseiflexus sp. RS-1 5209430 YP_001276789.1 CDS RoseRS_2462 NC_009523.1 3048692 3048976 D hypothetical protein 3048692..3048976 Roseiflexus sp. RS-1 5209431 YP_001276790.1 CDS RoseRS_2463 NC_009523.1 3049008 3049220 D hypothetical protein 3049008..3049220 Roseiflexus sp. RS-1 5209432 YP_001276791.1 CDS RoseRS_2464 NC_009523.1 3049481 3049882 D hypothetical protein 3049481..3049882 Roseiflexus sp. RS-1 5209433 YP_001276792.1 CDS RoseRS_2465 NC_009523.1 3050221 3051159 R hypothetical protein complement(3050221..3051159) Roseiflexus sp. RS-1 5209434 YP_001276793.1 CDS RoseRS_2466 NC_009523.1 3051953 3052480 R PFAM: Ferritin, Dps family protein; Ferritin, Dps family protein complement(3051953..3052480) Roseiflexus sp. RS-1 5209435 YP_001276794.1 CDS RoseRS_2467 NC_009523.1 3052589 3052930 R hypothetical protein complement(3052589..3052930) Roseiflexus sp. RS-1 5209436 YP_001276795.1 CDS RoseRS_2468 NC_009523.1 3053179 3054081 R hypothetical protein complement(3053179..3054081) Roseiflexus sp. RS-1 5209437 YP_001276796.1 CDS RoseRS_2469 NC_009523.1 3054703 3055482 R TIGRFAM: LPXTG-motif cell wall anchor domain; cell wall anchor domain-containing protein complement(3054703..3055482) Roseiflexus sp. RS-1 5209438 YP_001276797.1 CDS RoseRS_2470 NC_009523.1 3055623 3056660 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3055623..3056660) Roseiflexus sp. RS-1 5209439 YP_001276798.1 CDS RoseRS_2471 NC_009523.1 3056663 3057868 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3056663..3057868) Roseiflexus sp. RS-1 5209440 YP_001276799.1 CDS RoseRS_2472 NC_009523.1 3057865 3058968 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(3057865..3058968) Roseiflexus sp. RS-1 5209441 YP_001276800.1 CDS RoseRS_2473 NC_009523.1 3059315 3060346 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3059315..3060346 Roseiflexus sp. RS-1 5209442 YP_001276801.1 CDS RoseRS_2474 NC_009523.1 3061122 3062021 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3061122..3062021 Roseiflexus sp. RS-1 5209443 YP_001276802.1 CDS RoseRS_2475 NC_009523.1 3062068 3062958 D TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A 3062068..3062958 Roseiflexus sp. RS-1 5209444 YP_001276803.1 CDS RoseRS_2476 NC_009523.1 3062962 3063600 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3062962..3063600 Roseiflexus sp. RS-1 5209445 YP_001276804.1 CDS RoseRS_2477 NC_009523.1 3063597 3064457 D PFAM: ABC-2 type transporter; ABC-2 type transporter 3063597..3064457 Roseiflexus sp. RS-1 5209446 YP_001276805.1 CDS RoseRS_2478 NC_009523.1 3064772 3066133 D hypothetical protein 3064772..3066133 Roseiflexus sp. RS-1 5209447 YP_001276806.1 CDS RoseRS_2479 NC_009523.1 3066179 3067309 R PFAM: ABC-2 type transporter; ABC-2 type transporter complement(3066179..3067309) Roseiflexus sp. RS-1 5209448 YP_001276807.1 CDS RoseRS_2480 NC_009523.1 3067323 3068558 R PFAM: beta-lactamase; beta-lactamase complement(3067323..3068558) Roseiflexus sp. RS-1 5209449 YP_001276808.1 CDS RoseRS_2481 NC_009523.1 3068781 3069779 R PFAM: PAS fold-4 domain protein; PAS domain-containing protein complement(3068781..3069779) Roseiflexus sp. RS-1 5209450 YP_001276809.1 CDS RoseRS_2482 NC_009523.1 3070058 3070978 D hypothetical protein 3070058..3070978 Roseiflexus sp. RS-1 5209451 YP_001276810.1 CDS RoseRS_2483 NC_009523.1 3071103 3073289 D dehydrogenase-like protein 3071103..3073289 Roseiflexus sp. RS-1 5209452 YP_001276811.1 CDS RoseRS_2484 NC_009523.1 3073294 3073710 D PFAM: cytochrome c, class I; cytochrome c, class I 3073294..3073710 Roseiflexus sp. RS-1 5209453 YP_001276812.1 CDS RoseRS_2485 NC_009523.1 3073749 3074810 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(3073749..3074810) Roseiflexus sp. RS-1 5209454 YP_001276813.1 CDS RoseRS_2486 NC_009523.1 3074818 3075582 R PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(3074818..3075582) Roseiflexus sp. RS-1 5209455 YP_001276814.1 CDS RoseRS_2487 NC_009523.1 3075664 3076275 R hypothetical protein complement(3075664..3076275) Roseiflexus sp. RS-1 5209456 YP_001276815.1 CDS RoseRS_2488 NC_009523.1 3076456 3077439 D hypothetical protein 3076456..3077439 Roseiflexus sp. RS-1 5209457 YP_001276816.1 CDS RoseRS_2489 NC_009523.1 3077436 3077864 D PFAM: protein of unknown function DUF55; hypothetical protein 3077436..3077864 Roseiflexus sp. RS-1 5209458 YP_001276817.1 CDS RoseRS_2490 NC_009523.1 3077865 3079406 R hypothetical protein complement(3077865..3079406) Roseiflexus sp. RS-1 5209459 YP_001276818.1 CDS RoseRS_2491 NC_009523.1 3079664 3079906 D hypothetical protein 3079664..3079906 Roseiflexus sp. RS-1 5209460 YP_001276819.1 CDS RoseRS_2492 NC_009523.1 3079881 3080144 D PFAM: protein of unknown function DUF433; hypothetical protein 3079881..3080144 Roseiflexus sp. RS-1 5209461 YP_001276820.1 CDS RoseRS_2493 NC_009523.1 3080336 3080710 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3080336..3080710 Roseiflexus sp. RS-1 5209462 YP_001276821.1 CDS RoseRS_2494 NC_009523.1 3080726 3082009 D PFAM: CBS domain containing protein; protein of unknown function DUF190; hypothetical protein 3080726..3082009 Roseiflexus sp. RS-1 5209463 YP_001276822.1 CDS RoseRS_2495 NC_009523.1 3082133 3083809 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 3082133..3083809 Roseiflexus sp. RS-1 5209464 YP_001276823.1 CDS RoseRS_2496 NC_009523.1 3083942 3085801 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 3083942..3085801 Roseiflexus sp. RS-1 5209465 YP_001276824.1 CDS RoseRS_2497 NC_009523.1 3085962 3087080 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein 3085962..3087080 Roseiflexus sp. RS-1 5209466 YP_001276825.1 CDS RoseRS_2498 NC_009523.1 3087460 3088323 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; gluconolactonase complement(3087460..3088323) Roseiflexus sp. RS-1 5209467 YP_001276826.1 CDS RoseRS_2499 NC_009523.1 3088514 3091387 D PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; GAF sensor-containing protein serine phosphatase 3088514..3091387 Roseiflexus sp. RS-1 5209468 YP_001276827.1 CDS RoseRS_2500 NC_009523.1 3091400 3091972 R PFAM: CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase complement(3091400..3091972) Roseiflexus sp. RS-1 5209469 YP_001276828.1 CDS RoseRS_2501 NC_009523.1 3092050 3092799 R hypothetical protein complement(3092050..3092799) Roseiflexus sp. RS-1 5209470 YP_001276829.1 CDS RoseRS_2502 NC_009523.1 3092796 3093959 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3092796..3093959) Roseiflexus sp. RS-1 5209471 YP_001276830.1 CDS RoseRS_2503 NC_009523.1 3094005 3094949 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(3094005..3094949) Roseiflexus sp. RS-1 5209472 YP_001276831.1 CDS RoseRS_2504 NC_009523.1 3095241 3096746 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 3095241..3096746 Roseiflexus sp. RS-1 5209473 YP_001276832.1 CDS RoseRS_2505 NC_009523.1 3096839 3097402 R PFAM: protein of unknown function DUF820; hypothetical protein complement(3096839..3097402) Roseiflexus sp. RS-1 5209474 YP_001276833.1 CDS RoseRS_2506 NC_009523.1 3097680 3098975 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 3097680..3098975 Roseiflexus sp. RS-1 5209475 YP_001276834.1 CDS RoseRS_2507 NC_009523.1 3099100 3100956 R hypothetical protein complement(3099100..3100956) Roseiflexus sp. RS-1 5209476 YP_001276835.1 CDS RoseRS_2508 NC_009523.1 3101346 3102509 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase complement(3101346..3102509) Roseiflexus sp. RS-1 5209477 YP_001276836.1 CDS RoseRS_2509 NC_009523.1 3102621 3103787 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 3102621..3103787 Roseiflexus sp. RS-1 5209478 YP_001276837.1 CDS RoseRS_2510 NC_009523.1 3103812 3104849 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3103812..3104849 Roseiflexus sp. RS-1 5209479 YP_001276838.1 CDS RoseRS_2511 NC_009523.1 3104888 3107245 D PFAM: FG-GAP repeat protein; FG-GAP repeat-containing protein 3104888..3107245 Roseiflexus sp. RS-1 5209480 YP_001276839.1 CDS RoseRS_2512 NC_009523.1 3107296 3108318 D PFAM: ROK family protein; ROK family protein 3107296..3108318 Roseiflexus sp. RS-1 5209481 YP_001276840.1 CDS RoseRS_2513 NC_009523.1 3108343 3109542 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein 3108343..3109542 Roseiflexus sp. RS-1 5209482 YP_001276841.1 CDS RoseRS_2514 NC_009523.1 3109551 3110375 D hypothetical protein 3109551..3110375 Roseiflexus sp. RS-1 5209483 YP_001276842.1 CDS RoseRS_2515 NC_009523.1 3110369 3111160 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 3110369..3111160 Roseiflexus sp. RS-1 5209484 YP_001276843.1 CDS RoseRS_2516 NC_009523.1 3111187 3112209 D PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin-independent synthase MetE, N-terminal domain protein; methionine synthase, vitamin-B12 independent 3111187..3112209 Roseiflexus sp. RS-1 5209485 YP_001276844.1 CDS RoseRS_2517 NC_009523.1 3112286 3112555 R hypothetical protein complement(3112286..3112555) Roseiflexus sp. RS-1 5209486 YP_001276845.1 CDS RoseRS_2518 NC_009523.1 3112649 3113563 D PFAM: diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 3112649..3113563 Roseiflexus sp. RS-1 5209487 YP_001276846.1 CDS RoseRS_2519 NC_009523.1 3113569 3114525 R PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein complement(3113569..3114525) Roseiflexus sp. RS-1 5209488 YP_001276847.1 CDS RoseRS_2520 NC_009523.1 3114574 3115932 D PFAM: von Willebrand factor, type A; von Willebrand factor, type A 3114574..3115932 Roseiflexus sp. RS-1 5209489 YP_001276848.1 CDS RoseRS_2521 NC_009523.1 3115953 3117173 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3115953..3117173 Roseiflexus sp. RS-1 5209490 YP_001276849.1 CDS RoseRS_2522 NC_009523.1 3117463 3117822 D hypothetical protein 3117463..3117822 Roseiflexus sp. RS-1 5209491 YP_001276850.1 CDS RoseRS_2523 NC_009523.1 3117819 3118478 D PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase 3117819..3118478 Roseiflexus sp. RS-1 5209492 YP_001276851.1 CDS RoseRS_2524 NC_009523.1 3118593 3119015 D hypothetical protein 3118593..3119015 Roseiflexus sp. RS-1 5209493 YP_001276852.1 CDS RoseRS_2525 NC_009523.1 3119097 3122849 R TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase; magnesium chelatase subunit H complement(3119097..3122849) Roseiflexus sp. RS-1 5209494 YP_001276853.1 CDS RoseRS_2526 NC_009523.1 3122954 3123283 R hypothetical protein complement(3122954..3123283) Roseiflexus sp. RS-1 5209495 YP_001276854.1 CDS RoseRS_2527 NC_009523.1 3123256 3124704 R PFAM: glycosyl transferase, group 1; Glycosyltransferase 28, C-terminal domain; Monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase complement(3123256..3124704) Roseiflexus sp. RS-1 5209496 YP_001276855.1 CDS solA NC_009523.1 3125129 3126268 R catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase complement(3125129..3126268) Roseiflexus sp. RS-1 5209497 YP_001276856.1 CDS RoseRS_2529 NC_009523.1 3126433 3126747 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3126433..3126747 Roseiflexus sp. RS-1 5209498 YP_001276857.1 CDS RoseRS_2531 NC_009523.1 3127497 3128060 D hypothetical protein 3127497..3128060 Roseiflexus sp. RS-1 5209500 YP_001276858.1 CDS RoseRS_2532 NC_009523.1 3128112 3128426 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3128112..3128426 Roseiflexus sp. RS-1 5209501 YP_001276859.1 CDS RoseRS_2533 NC_009523.1 3128423 3128773 D PFAM: protein of unknown function DUF86; hypothetical protein 3128423..3128773 Roseiflexus sp. RS-1 5209502 YP_001276860.1 CDS RoseRS_2534 NC_009523.1 3128875 3129219 D hypothetical protein 3128875..3129219 Roseiflexus sp. RS-1 5209503 YP_001276861.1 CDS RoseRS_2535 NC_009523.1 3129485 3129799 D hypothetical protein 3129485..3129799 Roseiflexus sp. RS-1 5209504 YP_001276862.1 CDS RoseRS_2536 NC_009523.1 3129787 3129999 D hypothetical protein 3129787..3129999 Roseiflexus sp. RS-1 5209505 YP_001276863.1 CDS RoseRS_2537 NC_009523.1 3130191 3130346 D hypothetical protein 3130191..3130346 Roseiflexus sp. RS-1 5209506 YP_001276864.1 CDS RoseRS_2538 NC_009523.1 3130711 3134442 R hypothetical protein complement(3130711..3134442) Roseiflexus sp. RS-1 5209507 YP_001276865.1 CDS RoseRS_2539 NC_009523.1 3134439 3137348 R PFAM: helicase domain protein; SMART: DEAD-like helicases-like; helicase domain-containing protein complement(3134439..3137348) Roseiflexus sp. RS-1 5209508 YP_001276866.1 CDS RoseRS_2540 NC_009523.1 3138605 3139048 R PFAM: transposase IS200-family protein; transposase IS200-family protein complement(3138605..3139048) Roseiflexus sp. RS-1 5209509 YP_001276867.1 CDS RoseRS_2541 NC_009523.1 3141120 3142961 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3141120..3142961) Roseiflexus sp. RS-1 5209510 YP_001276868.1 CDS RoseRS_2542 NC_009523.1 3143544 3145667 R hypothetical protein complement(3143544..3145667) Roseiflexus sp. RS-1 5209511 YP_001276869.1 CDS RoseRS_2543 NC_009523.1 3145961 3146377 R hypothetical protein complement(3145961..3146377) Roseiflexus sp. RS-1 5209512 YP_001276870.1 CDS RoseRS_2544 NC_009523.1 3146547 3147473 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3146547..3147473 Roseiflexus sp. RS-1 5209513 YP_001276871.1 CDS RoseRS_2545 NC_009523.1 3147486 3148643 D TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 3147486..3148643 Roseiflexus sp. RS-1 5209514 YP_001276872.1 CDS RoseRS_2546 NC_009523.1 3149427 3151457 R hypothetical protein complement(3149427..3151457) Roseiflexus sp. RS-1 5209515 YP_001276873.1 CDS RoseRS_2547 NC_009523.1 3158392 3159645 D hypothetical protein 3158392..3159645 Roseiflexus sp. RS-1 5209516 YP_001276874.1 CDS RoseRS_2548 NC_009523.1 3160188 3161291 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3160188..3161291) Roseiflexus sp. RS-1 5209517 YP_001276875.1 CDS RoseRS_2549 NC_009523.1 3161294 3162640 R PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M20 complement(3161294..3162640) Roseiflexus sp. RS-1 5209518 YP_001276876.1 CDS RoseRS_2550 NC_009523.1 3162821 3163879 D PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein 3162821..3163879 Roseiflexus sp. RS-1 5209519 YP_001276877.1 CDS RoseRS_2551 NC_009523.1 3164218 3165348 R hypothetical protein complement(3164218..3165348) Roseiflexus sp. RS-1 5209520 YP_001276878.1 CDS RoseRS_2552 NC_009523.1 3165345 3166094 R PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(3165345..3166094) Roseiflexus sp. RS-1 5209521 YP_001276879.1 CDS RoseRS_2553 NC_009523.1 3166091 3166837 R PFAM: protein of unknown function DUF820; hypothetical protein complement(3166091..3166837) Roseiflexus sp. RS-1 5209522 YP_001276880.1 CDS RoseRS_2554 NC_009523.1 3166918 3167943 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(3166918..3167943) Roseiflexus sp. RS-1 5209523 YP_001276881.1 CDS RoseRS_2555 NC_009523.1 3168057 3168713 D hypothetical protein 3168057..3168713 Roseiflexus sp. RS-1 5209524 YP_001276882.1 CDS RoseRS_2556 NC_009523.1 3168723 3171053 D TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; (NiFe) hydrogenase maturation protein HypF 3168723..3171053 Roseiflexus sp. RS-1 5209525 YP_001276883.1 CDS RoseRS_2557 NC_009523.1 3171080 3172099 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 3171080..3172099 Roseiflexus sp. RS-1 5209526 YP_001276884.1 CDS RoseRS_2558 NC_009523.1 3172301 3173263 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(3172301..3173263) Roseiflexus sp. RS-1 5209527 YP_001276885.1 CDS RoseRS_2559 NC_009523.1 3174021 3175097 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; alanine racemase 3174021..3175097 Roseiflexus sp. RS-1 5209528 YP_001276886.1 CDS RoseRS_2560 NC_009523.1 3175110 3175361 D hypothetical protein 3175110..3175361 Roseiflexus sp. RS-1 5209529 YP_001276887.1 CDS RoseRS_2561 NC_009523.1 3175342 3176475 R glucose-6-phosphate dehydrogenase complement(3175342..3176475) Roseiflexus sp. RS-1 5209530 YP_001276888.1 CDS RoseRS_2562 NC_009523.1 3176460 3178001 R TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(3176460..3178001) Roseiflexus sp. RS-1 5209531 YP_001276889.1 CDS RoseRS_2563 NC_009523.1 3178023 3180626 R hypothetical protein complement(3178023..3180626) Roseiflexus sp. RS-1 5209532 YP_001276890.1 CDS RoseRS_2564 NC_009523.1 3180706 3180990 D PFAM: protein of unknown function DUF427; hypothetical protein 3180706..3180990 Roseiflexus sp. RS-1 5209533 YP_001276891.1 CDS RoseRS_2565 NC_009523.1 3181145 3181846 R PFAM: protein of unknown function DUF162; hypothetical protein complement(3181145..3181846) Roseiflexus sp. RS-1 5209534 YP_001276892.1 CDS RoseRS_2566 NC_009523.1 3181999 3183087 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 3181999..3183087 Roseiflexus sp. RS-1 5209535 YP_001276893.1 CDS RoseRS_2567 NC_009523.1 3183207 3184316 R hypothetical protein complement(3183207..3184316) Roseiflexus sp. RS-1 5209536 YP_001276894.1 CDS RoseRS_2568 NC_009523.1 3184348 3184554 R hypothetical protein complement(3184348..3184554) Roseiflexus sp. RS-1 5209537 YP_001276895.1 CDS RoseRS_2569 NC_009523.1 3184847 3186412 D PFAM: 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 3184847..3186412 Roseiflexus sp. RS-1 5209538 YP_001276896.1 CDS RoseRS_2570 NC_009523.1 3186441 3187448 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; catechol 2,3-dioxygenase 3186441..3187448 Roseiflexus sp. RS-1 5209539 YP_001276897.1 CDS RoseRS_2571 NC_009523.1 3187605 3188381 D PFAM: regulatory protein, IclR; regulatory protein IclR 3187605..3188381 Roseiflexus sp. RS-1 5209540 YP_001276898.1 CDS RoseRS_2572 NC_009523.1 3188363 3189280 D catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 3188363..3189280 Roseiflexus sp. RS-1 5209541 YP_001276899.1 CDS RoseRS_2573 NC_009523.1 3189277 3190293 D catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 3189277..3190293 Roseiflexus sp. RS-1 5209542 YP_001276900.1 CDS RoseRS_2574 NC_009523.1 3190310 3190855 D PFAM: flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 3190310..3190855 Roseiflexus sp. RS-1 5209543 YP_001276901.1 CDS RoseRS_2575 NC_009523.1 3190868 3191080 D TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 3190868..3191080 Roseiflexus sp. RS-1 5209544 YP_001276902.1 CDS RoseRS_2576 NC_009523.1 3191064 3191798 D PFAM: Hydratase/decarboxylase; hydratase/decarboxylase 3191064..3191798 Roseiflexus sp. RS-1 5209545 YP_001276903.1 CDS RoseRS_2577 NC_009523.1 3191798 3193252 D PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 3191798..3193252 Roseiflexus sp. RS-1 5209546 YP_001276904.1 CDS RoseRS_2578 NC_009523.1 3193234 3194064 D PFAM: Hydratase/decarboxylase; 4-oxalocrotonate decarboxylase 3193234..3194064 Roseiflexus sp. RS-1 5209547 YP_001276905.1 CDS RoseRS_2579 NC_009523.1 3194051 3194266 D hypothetical protein 3194051..3194266 Roseiflexus sp. RS-1 5209548 YP_001276906.1 CDS RoseRS_2580 NC_009523.1 3194897 3195421 D PFAM: ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 3194897..3195421 Roseiflexus sp. RS-1 5209549 YP_001276907.1 CDS RoseRS_2581 NC_009523.1 3195535 3199086 D PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; transcriptional activator domain-containing protein 3195535..3199086 Roseiflexus sp. RS-1 5209550 YP_001276908.1 CDS RoseRS_2582 NC_009523.1 3199848 3200891 D hypothetical protein 3199848..3200891 Roseiflexus sp. RS-1 5209551 YP_001276909.1 CDS RoseRS_2583 NC_009523.1 3201462 3206606 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 3201462..3206606 Roseiflexus sp. RS-1 5209552 YP_001276910.1 CDS RoseRS_2584 NC_009523.1 3206799 3207227 D hypothetical protein 3206799..3207227 Roseiflexus sp. RS-1 5209553 YP_001276911.1 CDS RoseRS_2585 NC_009523.1 3207889 3210489 R PFAM: protein of unknown function DUF214; hypothetical protein complement(3207889..3210489) Roseiflexus sp. RS-1 5209554 YP_001276912.1 CDS RoseRS_2586 NC_009523.1 3210506 3212119 R PFAM: amidohydrolase; Amidohydrolase 3; amidohydrolase 3 complement(3210506..3212119) Roseiflexus sp. RS-1 5209555 YP_001276913.1 CDS RoseRS_2587 NC_009523.1 3212116 3212949 R hypothetical protein complement(3212116..3212949) Roseiflexus sp. RS-1 5209556 YP_001276914.1 CDS RoseRS_2588 NC_009523.1 3212946 3213362 R hypothetical protein complement(3212946..3213362) Roseiflexus sp. RS-1 5209557 YP_001276915.1 CDS RoseRS_2589 NC_009523.1 3213377 3214369 R TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; CRISPR-associated RAMP Cmr4 family protein complement(3213377..3214369) Roseiflexus sp. RS-1 5209558 YP_001276916.1 CDS RoseRS_2590 NC_009523.1 3214376 3217207 R hypothetical protein complement(3214376..3217207) Roseiflexus sp. RS-1 5209559 YP_001276917.1 CDS RoseRS_2591 NC_009523.1 3217392 3218387 R PFAM: protein of unknown function DUF324; hypothetical protein complement(3217392..3218387) Roseiflexus sp. RS-1 5209560 YP_001276918.1 CDS RoseRS_2592 NC_009523.1 3219072 3220361 R hypothetical protein complement(3219072..3220361) Roseiflexus sp. RS-1 5209561 YP_001276919.1 CDS RoseRS_2593 NC_009523.1 3220358 3221428 R TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; CRISPR-associated RAMP Cmr1 family protein complement(3220358..3221428) Roseiflexus sp. RS-1 5209562 YP_001276920.1 CDS RoseRS_2594 NC_009523.1 3222136 3223572 D PFAM: amine oxidase; amine oxidase 3222136..3223572 Roseiflexus sp. RS-1 5209563 YP_001276921.1 CDS RoseRS_2595 NC_009523.1 3223584 3224201 D PFAM: protein of unknown function DUF820; hypothetical protein 3223584..3224201 Roseiflexus sp. RS-1 5209564 YP_001276922.1 CDS RoseRS_2596 NC_009523.1 3224222 3225784 D PFAM: carbohydrate kinase, FGGY; carbohydrate kinase FGGY 3224222..3225784 Roseiflexus sp. RS-1 5209565 YP_001276923.1 CDS RoseRS_2597 NC_009523.1 3225786 3227282 D PFAM: aminotransferase, class V; Pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 3225786..3227282 Roseiflexus sp. RS-1 5209566 YP_001276924.1 CDS RoseRS_2598 NC_009523.1 3227444 3227665 R hypothetical protein complement(3227444..3227665) Roseiflexus sp. RS-1 5209567 YP_001276925.1 CDS RoseRS_2599 NC_009523.1 3227697 3227906 R hypothetical protein complement(3227697..3227906) Roseiflexus sp. RS-1 5209568 YP_001276926.1 CDS RoseRS_2600 NC_009523.1 3227950 3229839 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase complement(3227950..3229839) Roseiflexus sp. RS-1 5209569 YP_001276927.1 CDS RoseRS_2601 NC_009523.1 3230312 3231490 D PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; peptidase M50 3230312..3231490 Roseiflexus sp. RS-1 5209570 YP_001276928.1 CDS RoseRS_2602 NC_009523.1 3231515 3231763 D hypothetical protein 3231515..3231763 Roseiflexus sp. RS-1 5209571 YP_001276929.1 CDS RoseRS_2603 NC_009523.1 3231767 3232279 D hypothetical protein 3231767..3232279 Roseiflexus sp. RS-1 5209572 YP_001276930.1 CDS RoseRS_2604 NC_009523.1 3232351 3232605 D hypothetical protein 3232351..3232605 Roseiflexus sp. RS-1 5209573 YP_001276931.1 CDS RoseRS_2605 NC_009523.1 3232602 3232937 D hypothetical protein 3232602..3232937 Roseiflexus sp. RS-1 5209574 YP_001276932.1 CDS RoseRS_2606 NC_009523.1 3232972 3234603 R hypothetical protein complement(3232972..3234603) Roseiflexus sp. RS-1 5209575 YP_001276933.1 CDS RoseRS_2607 NC_009523.1 3234813 3235547 D PFAM: metallophosphoesterase; metallophosphoesterase 3234813..3235547 Roseiflexus sp. RS-1 5209576 YP_001276934.1 CDS RoseRS_2608 NC_009523.1 3235547 3236914 D PFAM: aminotransferase class-III; class III aminotransferase 3235547..3236914 Roseiflexus sp. RS-1 5209577 YP_001276935.1 CDS RoseRS_2609 NC_009523.1 3236930 3237547 D TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; putative methyltransferase 3236930..3237547 Roseiflexus sp. RS-1 5209578 YP_001276936.1 CDS coaD NC_009523.1 3237613 3238095 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 3237613..3238095 Roseiflexus sp. RS-1 5209579 YP_001276937.1 CDS RoseRS_2611 NC_009523.1 3238117 3238536 D hypothetical protein 3238117..3238536 Roseiflexus sp. RS-1 5209580 YP_001276938.1 CDS RoseRS_2612 NC_009523.1 3238604 3239152 D PFAM: protein of unknown function DUF177; hypothetical protein 3238604..3239152 Roseiflexus sp. RS-1 5209581 YP_001276939.1 CDS RoseRS_2613 NC_009523.1 3239153 3239377 D TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 3239153..3239377 Roseiflexus sp. RS-1 5209582 YP_001276940.1 CDS RoseRS_2614 NC_009523.1 3239459 3240448 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 3239459..3240448 Roseiflexus sp. RS-1 5209583 YP_001276941.1 CDS RoseRS_2615 NC_009523.1 3240479 3241618 R ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase complement(3240479..3241618) Roseiflexus sp. RS-1 5209584 YP_001276942.1 CDS RoseRS_2616 NC_009523.1 3241615 3243012 R PFAM: protein of unknown function DUF407; hypothetical protein complement(3241615..3243012) Roseiflexus sp. RS-1 5209585 YP_001276943.1 CDS RoseRS_2617 NC_009523.1 3243028 3243990 R hypothetical protein complement(3243028..3243990) Roseiflexus sp. RS-1 5209586 YP_001276944.1 CDS RoseRS_2618 NC_009523.1 3244017 3244736 R PFAM: putative esterase; putative esterase complement(3244017..3244736) Roseiflexus sp. RS-1 5209587 YP_001276945.1 CDS RoseRS_2619 NC_009523.1 3245261 3245914 D PFAM: O-methyltransferase, family 3; Methyltransferase type 11; Methyltransferase type 12; O-methyltransferase family protein 3245261..3245914 Roseiflexus sp. RS-1 5209588 YP_001276946.1 CDS RoseRS_2620 NC_009523.1 3245919 3246641 R hypothetical protein complement(3245919..3246641) Roseiflexus sp. RS-1 5209589 YP_001276947.1 CDS RoseRS_2621 NC_009523.1 3246641 3247459 R hypothetical protein complement(3246641..3247459) Roseiflexus sp. RS-1 5209590 YP_001276948.1 CDS RoseRS_2622 NC_009523.1 3247483 3250440 R TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase II complement(3247483..3250440) Roseiflexus sp. RS-1 5209591 YP_001276949.1 CDS RoseRS_2623 NC_009523.1 3250447 3251208 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(3250447..3251208) Roseiflexus sp. RS-1 5209592 YP_001276950.1 CDS RoseRS_2624 NC_009523.1 3251830 3255363 D PFAM: cyclic nucleotide-binding; peptidase M50; cyclic nucleotide-binding protein 3251830..3255363 Roseiflexus sp. RS-1 5209593 YP_001276951.1 CDS RoseRS_2625 NC_009523.1 3255490 3256185 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 3255490..3256185 Roseiflexus sp. RS-1 5209594 YP_001276952.1 CDS RoseRS_2626 NC_009523.1 3256182 3257402 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 3256182..3257402 Roseiflexus sp. RS-1 5209595 YP_001276953.1 CDS RoseRS_2627 NC_009523.1 3258557 3259063 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 3258557..3259063 Roseiflexus sp. RS-1 5209596 YP_001276954.1 CDS RoseRS_2630 NC_009523.1 3260259 3262664 R hypothetical protein complement(3260259..3262664) Roseiflexus sp. RS-1 5209599 YP_001276955.1 CDS RoseRS_2631 NC_009523.1 3263026 3264807 R PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; protein kinase complement(3263026..3264807) Roseiflexus sp. RS-1 5209600 YP_001276956.1 CDS RoseRS_2632 NC_009523.1 3264815 3265321 R exonuclease-like protein complement(3264815..3265321) Roseiflexus sp. RS-1 5209601 YP_001276957.1 CDS RoseRS_2633 NC_009523.1 3265543 3266559 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 3265543..3266559 Roseiflexus sp. RS-1 5209602 YP_001276958.1 CDS RoseRS_2634 NC_009523.1 3266588 3269377 D hypothetical protein 3266588..3269377 Roseiflexus sp. RS-1 5209603 YP_001276959.1 CDS RoseRS_2635 NC_009523.1 3269392 3270459 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 3269392..3270459 Roseiflexus sp. RS-1 5209604 YP_001276960.1 CDS RoseRS_2636 NC_009523.1 3270540 3271520 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 3270540..3271520 Roseiflexus sp. RS-1 5209605 YP_001276961.1 CDS RoseRS_2637 NC_009523.1 3271706 3272971 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3271706..3272971 Roseiflexus sp. RS-1 5209606 YP_001276962.1 CDS RoseRS_2638 NC_009523.1 3272988 3274325 D PFAM: beta-lactamase; beta-lactamase 3272988..3274325 Roseiflexus sp. RS-1 5209607 YP_001276963.1 CDS RoseRS_2639 NC_009523.1 3274329 3275228 R PFAM: pseudouridine synthase; pseudouridine synthase complement(3274329..3275228) Roseiflexus sp. RS-1 5209608 YP_001276964.1 CDS RoseRS_2640 NC_009523.1 3275336 3276109 D PFAM: protein of unknown function DUF820; hypothetical protein 3275336..3276109 Roseiflexus sp. RS-1 5209609 YP_001276965.1 CDS RoseRS_2641 NC_009523.1 3276139 3278640 D PFAM: Lytic transglycosylase, catalytic; Tetratricopeptide TPR_4; lytic transglycosylase catalytic subunit 3276139..3278640 Roseiflexus sp. RS-1 5209610 YP_001276966.1 CDS RoseRS_2642 NC_009523.1 3278641 3278922 R hypothetical protein complement(3278641..3278922) Roseiflexus sp. RS-1 5209611 YP_001276967.1 CDS RoseRS_2643 NC_009523.1 3278938 3280179 R TIGRFAM: lycopene cyclase family protein; PFAM: FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; lycopene cyclase family protein complement(3278938..3280179) Roseiflexus sp. RS-1 5209612 YP_001276968.1 CDS RoseRS_2644 NC_009523.1 3280182 3281282 R PFAM: peptidase M29, aminopeptidase II; peptidase M29, aminopeptidase II complement(3280182..3281282) Roseiflexus sp. RS-1 5209613 YP_001276969.1 CDS RoseRS_2645 NC_009523.1 3281275 3282300 R PFAM: protein of unknown function UPF0052 and CofD; hypothetical protein complement(3281275..3282300) Roseiflexus sp. RS-1 5209614 YP_001276970.1 CDS RoseRS_2646 NC_009523.1 3282971 3283756 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(3282971..3283756) Roseiflexus sp. RS-1 5209615 YP_001276971.1 CDS RoseRS_2647 NC_009523.1 3283784 3284077 R hypothetical protein complement(3283784..3284077) Roseiflexus sp. RS-1 5209616 YP_001276972.1 CDS RoseRS_2648 NC_009523.1 3284201 3285172 D hypothetical protein 3284201..3285172 Roseiflexus sp. RS-1 5209617 YP_001276973.1 CDS RoseRS_2649 NC_009523.1 3285292 3286665 R hypothetical protein complement(3285292..3286665) Roseiflexus sp. RS-1 5209618 YP_001276974.1 CDS RoseRS_2650 NC_009523.1 3286689 3287876 R hypothetical protein complement(3286689..3287876) Roseiflexus sp. RS-1 5209619 YP_001276975.1 CDS RoseRS_2651 NC_009523.1 3287903 3289012 R PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/subunit complement(3287903..3289012) Roseiflexus sp. RS-1 5209620 YP_001276976.1 CDS RoseRS_2652 NC_009523.1 3289034 3290443 R PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphomannomutase complement(3289034..3290443) Roseiflexus sp. RS-1 5209621 YP_001276977.1 CDS RoseRS_2653 NC_009523.1 3290552 3292051 R PFAM: O-antigen polymerase; O-antigen polymerase complement(3290552..3292051) Roseiflexus sp. RS-1 5209622 YP_001276978.1 CDS RoseRS_2654 NC_009523.1 3292069 3293721 R hypothetical protein complement(3292069..3293721) Roseiflexus sp. RS-1 5209623 YP_001276979.1 CDS RoseRS_2655 NC_009523.1 3293856 3294524 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3293856..3294524 Roseiflexus sp. RS-1 5209624 YP_001276980.1 CDS RoseRS_2656 NC_009523.1 3295073 3297352 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 3295073..3297352 Roseiflexus sp. RS-1 5209625 YP_001276981.1 CDS RoseRS_2657 NC_009523.1 3297366 3299750 D hypothetical protein 3297366..3299750 Roseiflexus sp. RS-1 5209626 YP_001276982.1 CDS RoseRS_2658 NC_009523.1 3299753 3301813 D PFAM: glycosyl transferase, family 39; Tetratricopeptide TPR_2 repeat protein; glycosyl transferase family protein 3299753..3301813 Roseiflexus sp. RS-1 5209627 YP_001276983.1 CDS RoseRS_2659 NC_009523.1 3301838 3303994 D PFAM: glycosyl transferase, family 39; glycosyl transferase family protein 3301838..3303994 Roseiflexus sp. RS-1 5209628 YP_001276984.1 CDS RoseRS_2660 NC_009523.1 3304097 3304591 R hypothetical protein complement(3304097..3304591) Roseiflexus sp. RS-1 5209629 YP_001276985.1 CDS RoseRS_2661 NC_009523.1 3304685 3304903 R hypothetical protein complement(3304685..3304903) Roseiflexus sp. RS-1 5209630 YP_001276986.1 CDS RoseRS_2662 NC_009523.1 3304948 3309216 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; adenylyl cyclase class-3/4/guanylyl cyclase complement(3304948..3309216) Roseiflexus sp. RS-1 5209631 YP_001276987.1 CDS RoseRS_2663 NC_009523.1 3309333 3310847 R hypothetical protein complement(3309333..3310847) Roseiflexus sp. RS-1 5209632 YP_001276988.1 CDS RoseRS_2664 NC_009523.1 3310890 3311192 R SMART: regulatory protein, ArsR; regulatory protein ArsR complement(3310890..3311192) Roseiflexus sp. RS-1 5209633 YP_001276989.1 CDS RoseRS_2665 NC_009523.1 3311531 3312292 R hypothetical protein complement(3311531..3312292) Roseiflexus sp. RS-1 5209634 YP_001276990.1 CDS RoseRS_2666 NC_009523.1 3312292 3313320 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3312292..3313320) Roseiflexus sp. RS-1 5209635 YP_001276991.1 CDS RoseRS_2667 NC_009523.1 3313388 3314206 R hypothetical protein complement(3313388..3314206) Roseiflexus sp. RS-1 5209636 YP_001276992.1 CDS RoseRS_2668 NC_009523.1 3314213 3314596 R PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit complement(3314213..3314596) Roseiflexus sp. RS-1 5209637 YP_001276993.1 CDS RoseRS_2669 NC_009523.1 3314660 3316123 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone (complex I) complement(3314660..3316123) Roseiflexus sp. RS-1 5209638 YP_001276994.1 CDS RoseRS_2670 NC_009523.1 3316169 3316888 R hypothetical protein complement(3316169..3316888) Roseiflexus sp. RS-1 5209639 YP_001276995.1 CDS RoseRS_2671 NC_009523.1 3316892 3318628 R hypothetical protein complement(3316892..3318628) Roseiflexus sp. RS-1 5209640 YP_001276996.1 CDS RoseRS_2672 NC_009523.1 3318633 3319709 R PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH-ubiquinone oxidoreductase, chain 49kDa complement(3318633..3319709) Roseiflexus sp. RS-1 5209641 YP_001276997.1 CDS RoseRS_2673 NC_009523.1 3319808 3320191 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(3319808..3320191) Roseiflexus sp. RS-1 5209642 YP_001276998.1 CDS RoseRS_2674 NC_009523.1 3320332 3321948 R SMART: AAA ATPase; ATPase AAA complement(3320332..3321948) Roseiflexus sp. RS-1 5209643 YP_001276999.1 CDS RoseRS_2675 NC_009523.1 3322134 3323003 D hypothetical protein 3322134..3323003 Roseiflexus sp. RS-1 5209644 YP_001277000.1 CDS RoseRS_2676 NC_009523.1 3323022 3324731 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3323022..3324731 Roseiflexus sp. RS-1 5209645 YP_001277001.1 CDS RoseRS_2677 NC_009523.1 3324724 3328527 D PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; glycosyl transferase family protein 3324724..3328527 Roseiflexus sp. RS-1 5209646 YP_001277002.1 CDS RoseRS_2678 NC_009523.1 3328589 3329077 R TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; phosphodiesterase complement(3328589..3329077) Roseiflexus sp. RS-1 5209647 YP_001277003.1 CDS nadE NC_009523.1 3329227 3331287 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 3329227..3331287 Roseiflexus sp. RS-1 5209648 YP_001277004.1 CDS RoseRS_2680 NC_009523.1 3331352 3332515 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein 3331352..3332515 Roseiflexus sp. RS-1 5209649 YP_001277005.1 CDS RoseRS_2681 NC_009523.1 3332512 3333561 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; homoserine dehydrogenase, NAD-binding; oxidoreductase domain-containing protein 3332512..3333561 Roseiflexus sp. RS-1 5209650 YP_001277006.1 CDS RoseRS_2682 NC_009523.1 3333605 3334381 D PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3333605..3334381 Roseiflexus sp. RS-1 5209651 YP_001277007.1 CDS RoseRS_2683 NC_009523.1 3334671 3335408 R PFAM: YhhN family protein; YhhN family protein complement(3334671..3335408) Roseiflexus sp. RS-1 5209652 YP_001277008.1 CDS RoseRS_2684 NC_009523.1 3335652 3336365 D PFAM: dienelactone hydrolase; dienelactone hydrolase 3335652..3336365 Roseiflexus sp. RS-1 5209653 YP_001277009.1 CDS RoseRS_2685 NC_009523.1 3336820 3337284 R hypothetical protein complement(3336820..3337284) Roseiflexus sp. RS-1 5209654 YP_001277010.1 CDS RoseRS_2686 NC_009523.1 3337731 3338042 R PFAM: protein of unknown function DUF45; hypothetical protein complement(3337731..3338042) Roseiflexus sp. RS-1 5209655 YP_001277011.1 CDS RoseRS_2687 NC_009523.1 3338039 3340978 R TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease complement(3338039..3340978) Roseiflexus sp. RS-1 5209656 YP_001277012.1 CDS RoseRS_2688 NC_009523.1 3340975 3341694 R hypothetical protein complement(3340975..3341694) Roseiflexus sp. RS-1 5209657 YP_001277013.1 CDS RoseRS_2689 NC_009523.1 3341698 3342570 R PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit complement(3341698..3342570) Roseiflexus sp. RS-1 5209658 YP_001277014.1 CDS RoseRS_2690 NC_009523.1 3342552 3344501 R hypothetical protein complement(3342552..3344501) Roseiflexus sp. RS-1 5209659 YP_001277015.1 CDS RoseRS_2691 NC_009523.1 3344498 3346069 R PFAM: N-6 DNA methylase; N-6 DNA methylase complement(3344498..3346069) Roseiflexus sp. RS-1 5209660 YP_001277016.1 CDS RoseRS_2692 NC_009523.1 3346280 3347536 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 3346280..3347536 Roseiflexus sp. RS-1 5209661 YP_001277017.1 CDS RoseRS_2693 NC_009523.1 3347533 3348186 D TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 3347533..3348186 Roseiflexus sp. RS-1 5209662 YP_001277018.1 CDS RoseRS_2694 NC_009523.1 3348208 3351117 R TIGRFAM: PAS sensor protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; GAF domain protein; PAS fold-4 domain protein; putative PAS/PAC sensor protein complement(3348208..3351117) Roseiflexus sp. RS-1 5209663 YP_001277019.1 CDS rplU NC_009523.1 3351335 3351697 D PFAM: ribosomal protein L21; 50S ribosomal protein L21 3351335..3351697 Roseiflexus sp. RS-1 5209664 YP_001277020.1 CDS rpmA NC_009523.1 3351687 3351944 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 3351687..3351944 Roseiflexus sp. RS-1 5209665 YP_001277021.1 CDS RoseRS_2697 NC_009523.1 3351955 3352257 D PFAM: ribosomal protein L31; 50S ribosomal protein L31 3351955..3352257 Roseiflexus sp. RS-1 5209666 YP_001277022.1 CDS RoseRS_2698 NC_009523.1 3352239 3353210 R PFAM: Helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein complement(3352239..3353210) Roseiflexus sp. RS-1 5209667 YP_001277023.1 CDS RoseRS_2699 NC_009523.1 3353249 3353680 R hypothetical protein complement(3353249..3353680) Roseiflexus sp. RS-1 5209668 YP_001277024.1 CDS RoseRS_2700 NC_009523.1 3353914 3355329 D hypothetical protein 3353914..3355329 Roseiflexus sp. RS-1 5209669 YP_001277025.1 CDS RoseRS_2701 NC_009523.1 3355329 3356738 D hypothetical protein 3355329..3356738 Roseiflexus sp. RS-1 5209670 YP_001277026.1 CDS RoseRS_2702 NC_009523.1 3356710 3357633 D hypothetical protein 3356710..3357633 Roseiflexus sp. RS-1 5209671 YP_001277027.1 CDS RoseRS_2703 NC_009523.1 3357637 3359466 D TIGRFAM: conserved hypothetical membrane protein; PFAM: von Willebrand factor, type A; hypothetical protein 3357637..3359466 Roseiflexus sp. RS-1 5209672 YP_001277028.1 CDS RoseRS_2704 NC_009523.1 3359479 3362034 D PFAM: von Willebrand factor, type A; von Willebrand factor, type A 3359479..3362034 Roseiflexus sp. RS-1 5209673 YP_001277029.1 CDS RoseRS_2705 NC_009523.1 3362152 3363012 D PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3362152..3363012 Roseiflexus sp. RS-1 5209674 YP_001277030.1 CDS RoseRS_2706 NC_009523.1 3362894 3363733 R PFAM: protein of unknown function DUF422; hypothetical protein complement(3362894..3363733) Roseiflexus sp. RS-1 5209675 YP_001277031.1 CDS RoseRS_2707 NC_009523.1 3363819 3365204 D hypothetical protein 3363819..3365204 Roseiflexus sp. RS-1 5209676 YP_001277032.1 CDS RoseRS_2708 NC_009523.1 3365196 3366779 R PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase complement(3365196..3366779) Roseiflexus sp. RS-1 5209677 YP_001277033.1 CDS RoseRS_2709 NC_009523.1 3366922 3367329 D PFAM: response regulator receiver; response regulator receiver protein 3366922..3367329 Roseiflexus sp. RS-1 5209678 YP_001277034.1 CDS RoseRS_2710 NC_009523.1 3367336 3367629 R hypothetical protein complement(3367336..3367629) Roseiflexus sp. RS-1 5209679 YP_001277035.1 CDS RoseRS_2711 NC_009523.1 3367689 3369338 D TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; YidE/YbjL duplication 3367689..3369338 Roseiflexus sp. RS-1 5209680 YP_001277036.1 CDS RoseRS_2713 NC_009523.1 3369733 3371751 R hypothetical protein complement(3369733..3371751) Roseiflexus sp. RS-1 5209682 YP_001277037.1 CDS RoseRS_2714 NC_009523.1 3371823 3374885 R PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; beta-galactosidase complement(3371823..3374885) Roseiflexus sp. RS-1 5209683 YP_001277038.1 CDS RoseRS_2715 NC_009523.1 3374948 3376378 R PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase complement(3374948..3376378) Roseiflexus sp. RS-1 5209684 YP_001277039.1 CDS RoseRS_2716 NC_009523.1 3376639 3378318 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase, HAMP region domain protein; anti-sigma-factor antagonist 3376639..3378318 Roseiflexus sp. RS-1 5209685 YP_001277040.1 CDS RoseRS_2717 NC_009523.1 3378634 3380460 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3378634..3380460) Roseiflexus sp. RS-1 5209686 YP_001277041.1 CDS RoseRS_2718 NC_009523.1 3380457 3380930 R hypothetical protein complement(3380457..3380930) Roseiflexus sp. RS-1 5209687 YP_001277042.1 CDS RoseRS_2719 NC_009523.1 3380981 3382801 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3380981..3382801) Roseiflexus sp. RS-1 5209688 YP_001277043.1 CDS RoseRS_2720 NC_009523.1 3382798 3383304 R PFAM: regulatory protein, MarR; MarR family transcriptional regulator complement(3382798..3383304) Roseiflexus sp. RS-1 5209689 YP_001277044.1 CDS RoseRS_2721 NC_009523.1 3383380 3383895 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(3383380..3383895) Roseiflexus sp. RS-1 5209690 YP_001277045.1 CDS RoseRS_2722 NC_009523.1 3383980 3385149 D TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase 3383980..3385149 Roseiflexus sp. RS-1 5209691 YP_001277046.1 CDS RoseRS_2723 NC_009523.1 3385146 3386246 D catalyzes N(2)-acetyl-L-lysine + H(2)O = acetate + L-lysine; acetyl-lysine deacetylase 3385146..3386246 Roseiflexus sp. RS-1 5209692 YP_001277047.1 CDS RoseRS_2724 NC_009523.1 3386821 3387603 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; DeoR family transcriptional regulator 3386821..3387603 Roseiflexus sp. RS-1 5209693 YP_001277048.1 CDS RoseRS_2725 NC_009523.1 3387614 3389119 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3387614..3389119 Roseiflexus sp. RS-1 5209694 YP_001277049.1 CDS RoseRS_2726 NC_009523.1 3389153 3390175 D PFAM: inner-membrane translocator; monosaccharide-transporting ATPase 3389153..3390175 Roseiflexus sp. RS-1 5209695 YP_001277050.1 CDS RoseRS_2727 NC_009523.1 3390165 3391178 D PFAM: inner-membrane translocator; monosaccharide-transporting ATPase 3390165..3391178 Roseiflexus sp. RS-1 5209696 YP_001277051.1 CDS RoseRS_2729 NC_009523.1 3392448 3392771 D PFAM: protein of unknown function DUF718; hypothetical protein 3392448..3392771 Roseiflexus sp. RS-1 5209698 YP_001277052.1 CDS RoseRS_2730 NC_009523.1 3392799 3394082 D catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 3392799..3394082 Roseiflexus sp. RS-1 5209699 YP_001277053.1 CDS RoseRS_2731 NC_009523.1 3394142 3396331 D TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 3394142..3396331 Roseiflexus sp. RS-1 5209700 YP_001277054.1 CDS RoseRS_2732 NC_009523.1 3396344 3397801 D PFAM: carbohydrate kinase, FGGY; carbohydrate kinase FGGY 3396344..3397801 Roseiflexus sp. RS-1 5209701 YP_001277055.1 CDS RoseRS_2733 NC_009523.1 3399003 3399500 R TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; hydrogenase maturation protease complement(3399003..3399500) Roseiflexus sp. RS-1 5209702 YP_001277056.1 CDS RoseRS_2734 NC_009523.1 3399778 3402003 D TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 3399778..3402003 Roseiflexus sp. RS-1 5209703 YP_001277057.1 CDS RoseRS_2735 NC_009523.1 3402000 3404699 D PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase N-terminal domain protein; alpha-L-rhamnosidase 3402000..3404699 Roseiflexus sp. RS-1 5209704 YP_001277058.1 CDS RoseRS_2736 NC_009523.1 3404977 3405378 D hypothetical protein 3404977..3405378 Roseiflexus sp. RS-1 5209705 YP_001277059.1 CDS RoseRS_2737 NC_009523.1 3405525 3414119 D PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; glycosyltransferase 3405525..3414119 Roseiflexus sp. RS-1 5209706 YP_001277060.1 CDS RoseRS_2738 NC_009523.1 3414324 3414941 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 3414324..3414941 Roseiflexus sp. RS-1 5209707 YP_001277061.1 CDS RoseRS_2739 NC_009523.1 3414951 3416177 D hypothetical protein 3414951..3416177 Roseiflexus sp. RS-1 5209708 YP_001277062.1 CDS RoseRS_2740 NC_009523.1 3416181 3416795 D PFAM: protein of unknown function DUF820; hypothetical protein 3416181..3416795 Roseiflexus sp. RS-1 5209709 YP_001277063.1 CDS RoseRS_2741 NC_009523.1 3416823 3417707 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3416823..3417707 Roseiflexus sp. RS-1 5209710 YP_001277064.1 CDS RoseRS_2742 NC_009523.1 3417717 3418763 D PFAM: Porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase 3417717..3418763 Roseiflexus sp. RS-1 5209711 YP_001277065.1 CDS RoseRS_2743 NC_009523.1 3418767 3419624 R PFAM: protein of unknown function DUF92, transmembrane; hypothetical protein complement(3418767..3419624) Roseiflexus sp. RS-1 5209712 YP_001277066.1 CDS RoseRS_2744 NC_009523.1 3419634 3420140 R PFAM: cyclase/dehydrase; cyclase/dehydrase complement(3419634..3420140) Roseiflexus sp. RS-1 5209713 YP_001277067.1 CDS RoseRS_2745 NC_009523.1 3420266 3420613 D hypothetical protein 3420266..3420613 Roseiflexus sp. RS-1 5209714 YP_001277068.1 CDS RoseRS_2746 NC_009523.1 3420702 3421589 D hypothetical protein 3420702..3421589 Roseiflexus sp. RS-1 5209715 YP_001277069.1 CDS RoseRS_2747 NC_009523.1 3422040 3422450 D hypothetical protein 3422040..3422450 Roseiflexus sp. RS-1 5209716 YP_001277070.1 CDS RoseRS_2748 NC_009523.1 3422493 3424073 D PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; polysaccharide biosynthesis protein 3422493..3424073 Roseiflexus sp. RS-1 5209717 YP_001277071.1 CDS RoseRS_2749 NC_009523.1 3425311 3427158 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 3425311..3427158 Roseiflexus sp. RS-1 5209718 YP_001277072.1 CDS RoseRS_2750 NC_009523.1 3427161 3428324 D PFAM: amidohydrolase 2; amidohydrolase 2 3427161..3428324 Roseiflexus sp. RS-1 5209719 YP_001277073.1 CDS RoseRS_2751 NC_009523.1 3428321 3429544 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 3428321..3429544 Roseiflexus sp. RS-1 5209720 YP_001277074.1 CDS RoseRS_2752 NC_009523.1 3429569 3430375 D TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase 3429569..3430375 Roseiflexus sp. RS-1 5209721 YP_001277075.1 CDS RoseRS_2753 NC_009523.1 3430436 3433294 D PFAM: phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 3430436..3433294 Roseiflexus sp. RS-1 5209722 YP_001277076.1 CDS RoseRS_2754 NC_009523.1 3433297 3433932 R hypothetical protein complement(3433297..3433932) Roseiflexus sp. RS-1 5209723 YP_001277077.1 CDS RoseRS_2755 NC_009523.1 3434336 3436348 D PFAM: VanW family protein; VanW family protein 3434336..3436348 Roseiflexus sp. RS-1 5209724 YP_001277078.1 CDS RoseRS_2756 NC_009523.1 3436537 3437076 R hypothetical protein complement(3436537..3437076) Roseiflexus sp. RS-1 5209725 YP_001277079.1 CDS RoseRS_2757 NC_009523.1 3437204 3437674 D hypothetical protein 3437204..3437674 Roseiflexus sp. RS-1 5209726 YP_001277080.1 CDS RoseRS_2758 NC_009523.1 3437685 3438353 D PFAM: Endonuclease V; deoxyribonuclease V 3437685..3438353 Roseiflexus sp. RS-1 5209727 YP_001277081.1 CDS RoseRS_2759 NC_009523.1 3438489 3438860 D hypothetical protein 3438489..3438860 Roseiflexus sp. RS-1 5209728 YP_001277082.1 CDS RoseRS_2760 NC_009523.1 3439122 3439775 R PFAM: protein of unknown function DUF192; hypothetical protein complement(3439122..3439775) Roseiflexus sp. RS-1 5209729 YP_001277083.1 CDS RoseRS_2761 NC_009523.1 3439782 3441221 R PFAM: protein of unknown function UPF0089; hypothetical protein complement(3439782..3441221) Roseiflexus sp. RS-1 5209730 YP_001277084.1 CDS RoseRS_2762 NC_009523.1 3441388 3442431 R PFAM: membrane lipoprotein lipid attachment site; membrane lipoprotein lipid attachment site complement(3441388..3442431) Roseiflexus sp. RS-1 5209731 YP_001277085.1 CDS RoseRS_2763 NC_009523.1 3442434 3443261 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3442434..3443261) Roseiflexus sp. RS-1 5209732 YP_001277086.1 CDS RoseRS_2764 NC_009523.1 3443683 3444732 R PFAM: ROK family protein; ROK family protein complement(3443683..3444732) Roseiflexus sp. RS-1 5209733 YP_001277087.1 CDS RoseRS_2765 NC_009523.1 3444902 3446161 D PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; protein phosphatase 2C domain-containing protein 3444902..3446161 Roseiflexus sp. RS-1 5209734 YP_001277088.1 CDS RoseRS_2766 NC_009523.1 3446162 3447997 D PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; protein phosphatase 2C domain-containing protein 3446162..3447997 Roseiflexus sp. RS-1 5209735 YP_001277089.1 CDS RoseRS_2767 NC_009523.1 3448006 3449379 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 3448006..3449379 Roseiflexus sp. RS-1 5209736 YP_001277090.1 CDS RoseRS_2768 NC_009523.1 3449464 3450702 D PFAM: von Willebrand factor, type A; von Willebrand factor, type A 3449464..3450702 Roseiflexus sp. RS-1 5209737 YP_001277091.1 CDS RoseRS_2769 NC_009523.1 3450729 3452309 D PFAM: Forkhead-associated protein; FHA domain-containing protein 3450729..3452309 Roseiflexus sp. RS-1 5209738 YP_001277092.1 CDS RoseRS_2770 NC_009523.1 3452701 3454512 R PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(3452701..3454512) Roseiflexus sp. RS-1 5209739 YP_001277093.1 CDS RoseRS_2771 NC_009523.1 3454531 3455871 R TIGRFAM: putative hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; putative hydroxymethylpyrimidine transporter CytX complement(3454531..3455871) Roseiflexus sp. RS-1 5209740 YP_001277094.1 CDS RoseRS_2772 NC_009523.1 3456432 3457265 R hypothetical protein complement(3456432..3457265) Roseiflexus sp. RS-1 5209741 YP_001277095.1 CDS RoseRS_2773 NC_009523.1 3457268 3458494 R PFAM: protein of unknown function UPF0261; hypothetical protein complement(3457268..3458494) Roseiflexus sp. RS-1 5209742 YP_001277096.1 CDS RoseRS_2774 NC_009523.1 3458641 3459045 R hypothetical protein complement(3458641..3459045) Roseiflexus sp. RS-1 5209743 YP_001277097.1 CDS RoseRS_2775 NC_009523.1 3459066 3460460 R hypothetical protein complement(3459066..3460460) Roseiflexus sp. RS-1 5209744 YP_001277098.1 CDS RoseRS_2777 NC_009523.1 3462717 3463886 R PFAM: beta-lactamase; beta-lactamase complement(3462717..3463886) Roseiflexus sp. RS-1 5209746 YP_001277099.1 CDS RoseRS_2778 NC_009523.1 3463927 3466335 R TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(3463927..3466335) Roseiflexus sp. RS-1 5209747 YP_001277100.1 CDS RoseRS_2779 NC_009523.1 3466332 3466751 R molecular chaperone (small heat shock protein)-like protein complement(3466332..3466751) Roseiflexus sp. RS-1 5209748 YP_001277101.1 CDS RoseRS_2780 NC_009523.1 3466802 3467698 R PFAM: luciferase family protein; luciferase family protein complement(3466802..3467698) Roseiflexus sp. RS-1 5209749 YP_001277102.1 CDS rplS NC_009523.1 3467809 3468159 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3467809..3468159 Roseiflexus sp. RS-1 5209750 YP_001277103.1 CDS RoseRS_2782 NC_009523.1 3468186 3468890 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 3468186..3468890 Roseiflexus sp. RS-1 5209751 YP_001277104.1 CDS rnhB NC_009523.1 3468865 3469548 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3468865..3469548 Roseiflexus sp. RS-1 5209752 YP_001277105.1 CDS RoseRS_2784 NC_009523.1 3469545 3470282 D hypothetical protein 3469545..3470282 Roseiflexus sp. RS-1 5209753 YP_001277106.1 CDS RoseRS_2785 NC_009523.1 3470302 3471348 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3470302..3471348 Roseiflexus sp. RS-1 5209754 YP_001277107.1 CDS RoseRS_2786 NC_009523.1 3472031 3474253 D hypothetical protein 3472031..3474253 Roseiflexus sp. RS-1 5209755 YP_001277108.1 CDS RoseRS_2787 NC_009523.1 3474479 3475643 D hypothetical protein join(3474479..3474745,3474747..3475643) Roseiflexus sp. RS-1 5209756 YP_001277109.1 CDS RoseRS_2788 NC_009523.1 3476056 3477057 R PFAM: PfkB domain protein; ribokinase-like domain-containing protein complement(3476056..3477057) Roseiflexus sp. RS-1 5209757 YP_001277110.1 CDS RoseRS_2789 NC_009523.1 3477265 3477606 D hypothetical protein 3477265..3477606 Roseiflexus sp. RS-1 5209758 YP_001277111.1 CDS RoseRS_2790 NC_009523.1 3477613 3478218 R PFAM: Tellurite resistance protein TehB; thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(3477613..3478218) Roseiflexus sp. RS-1 5209759 YP_001277112.1 CDS RoseRS_2791 NC_009523.1 3478325 3478930 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 3478325..3478930 Roseiflexus sp. RS-1 5209760 YP_001277113.1 CDS RoseRS_2792 NC_009523.1 3478920 3479183 D hypothetical protein 3478920..3479183 Roseiflexus sp. RS-1 5209761 YP_001277114.1 CDS RoseRS_2793 NC_009523.1 3479226 3479828 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 3479226..3479828 Roseiflexus sp. RS-1 5209762 YP_001277115.1 CDS RoseRS_2794 NC_009523.1 3479861 3480145 D hypothetical protein 3479861..3480145 Roseiflexus sp. RS-1 5209763 YP_001277116.1 CDS RoseRS_2795 NC_009523.1 3480135 3480437 D hypothetical protein 3480135..3480437 Roseiflexus sp. RS-1 5209764 YP_001277117.1 CDS RoseRS_2796 NC_009523.1 3480762 3482393 R PFAM: von Willebrand factor, type A; von Willebrand factor, type A complement(3480762..3482393) Roseiflexus sp. RS-1 5209765 YP_001277118.1 CDS RoseRS_2797 NC_009523.1 3482416 3483354 R PFAM: protein of unknown function DUF820; hypothetical protein complement(3482416..3483354) Roseiflexus sp. RS-1 5209766 YP_001277119.1 CDS RoseRS_2798 NC_009523.1 3483811 3484566 R hypothetical protein complement(3483811..3484566) Roseiflexus sp. RS-1 5209767 YP_001277120.1 CDS RoseRS_2799 NC_009523.1 3485215 3486900 R PFAM: von Willebrand factor, type A; von Willebrand factor, type A complement(3485215..3486900) Roseiflexus sp. RS-1 5209768 YP_001277121.1 CDS RoseRS_2800 NC_009523.1 3487149 3488393 R hypothetical protein complement(3487149..3488393) Roseiflexus sp. RS-1 5209769 YP_001277122.1 CDS RoseRS_2801 NC_009523.1 3488897 3490003 R PFAM: putative RNA methylase; Methyltransferase type 11; putative RNA methylase complement(3488897..3490003) Roseiflexus sp. RS-1 5209770 YP_001277123.1 CDS RoseRS_2802 NC_009523.1 3490446 3492971 D hypothetical protein 3490446..3492971 Roseiflexus sp. RS-1 5209771 YP_001277124.1 CDS RoseRS_2803 NC_009523.1 3493259 3496069 D chromosome segregation ATPase-like protein 3493259..3496069 Roseiflexus sp. RS-1 5209772 YP_001277125.1 CDS RoseRS_2804 NC_009523.1 3496998 3497396 R hypothetical protein complement(3496998..3497396) Roseiflexus sp. RS-1 5209773 YP_001277126.1 CDS RoseRS_2805 NC_009523.1 3497486 3498076 D hypothetical protein 3497486..3498076 Roseiflexus sp. RS-1 5209774 YP_001277127.1 CDS RoseRS_2806 NC_009523.1 3498147 3498581 D hypothetical protein 3498147..3498581 Roseiflexus sp. RS-1 5209775 YP_001277128.1 CDS RoseRS_2807 NC_009523.1 3498699 3499277 D hypothetical protein 3498699..3499277 Roseiflexus sp. RS-1 5209776 YP_001277129.1 CDS RoseRS_2808 NC_009523.1 3499400 3501583 D PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein 3499400..3501583 Roseiflexus sp. RS-1 5209777 YP_001277130.1 CDS RoseRS_2809 NC_009523.1 3501720 3502703 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3501720..3502703 Roseiflexus sp. RS-1 5209778 YP_001277131.1 CDS RoseRS_2810 NC_009523.1 3502765 3503892 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3502765..3503892 Roseiflexus sp. RS-1 5209779 YP_001277132.1 CDS RoseRS_2811 NC_009523.1 3503905 3504951 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3503905..3504951 Roseiflexus sp. RS-1 5209780 YP_001277133.1 CDS RoseRS_2812 NC_009523.1 3504961 3506067 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3504961..3506067 Roseiflexus sp. RS-1 5209781 YP_001277134.1 CDS RoseRS_2813 NC_009523.1 3506122 3506535 D PFAM: OsmC family protein; OsmC family protein 3506122..3506535 Roseiflexus sp. RS-1 5209782 YP_001277135.1 CDS RoseRS_2814 NC_009523.1 3506613 3508028 R PFAM: glycoside hydrolase, family 29 (alpha-L-fucosidase); alpha-L-fucosidase complement(3506613..3508028) Roseiflexus sp. RS-1 5209783 YP_001277136.1 CDS RoseRS_2815 NC_009523.1 3508126 3509436 R PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein complement(3508126..3509436) Roseiflexus sp. RS-1 5209784 YP_001277137.1 CDS RoseRS_2816 NC_009523.1 3509803 3510510 D PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator 3509803..3510510 Roseiflexus sp. RS-1 5209785 YP_001277138.1 CDS RoseRS_2817 NC_009523.1 3510563 3510892 D hypothetical protein 3510563..3510892 Roseiflexus sp. RS-1 5209786 YP_001277139.1 CDS RoseRS_2818 NC_009523.1 3511311 3512777 D PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 3511311..3512777 Roseiflexus sp. RS-1 5209787 YP_001277140.1 CDS RoseRS_2819 NC_009523.1 3512848 3513795 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3512848..3513795 Roseiflexus sp. RS-1 5209788 YP_001277141.1 CDS RoseRS_2820 NC_009523.1 3513819 3514718 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3513819..3514718 Roseiflexus sp. RS-1 5209789 YP_001277142.1 CDS RoseRS_2821 NC_009523.1 3515401 3516468 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; parB-like partition protein complement(3515401..3516468) Roseiflexus sp. RS-1 5209790 YP_001277143.1 CDS RoseRS_2822 NC_009523.1 3516628 3517371 D PFAM: Forkhead-associated protein; FHA domain-containing protein 3516628..3517371 Roseiflexus sp. RS-1 5209791 YP_001277144.1 CDS RoseRS_2823 NC_009523.1 3517371 3519203 D TIGRFAM: magnesium chelatase ATPase subunit D; PFAM: von Willebrand factor, type A; magnesium chelatase ATPase subunit D 3517371..3519203 Roseiflexus sp. RS-1 5209792 YP_001277145.1 CDS RoseRS_2826 NC_009523.1 3520282 3522348 R PFAM: alpha/beta hydrolase fold; TAP domain protein; TAP domain-containing protein complement(3520282..3522348) Roseiflexus sp. RS-1 5209795 YP_001277146.1 CDS RoseRS_2827 NC_009523.1 3522429 3523790 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3522429..3523790 Roseiflexus sp. RS-1 5209796 YP_001277147.1 CDS RoseRS_2828 NC_009523.1 3524536 3529461 R PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(3524536..3529461) Roseiflexus sp. RS-1 5209797 YP_001277148.1 CDS RoseRS_2829 NC_009523.1 3529865 3532864 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3529865..3532864 Roseiflexus sp. RS-1 5209798 YP_001277149.1 CDS RoseRS_2830 NC_009523.1 3533008 3533448 D hypothetical protein 3533008..3533448 Roseiflexus sp. RS-1 5209799 YP_001277150.1 CDS RoseRS_2831 NC_009523.1 3533472 3534146 D PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3533472..3534146 Roseiflexus sp. RS-1 5209800 YP_001277151.1 CDS RoseRS_2832 NC_009523.1 3534196 3534339 R hypothetical protein complement(3534196..3534339) Roseiflexus sp. RS-1 5209801 YP_001277152.1 CDS RoseRS_2833 NC_009523.1 3534657 3535619 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 3534657..3535619 Roseiflexus sp. RS-1 5209802 YP_001277153.1 CDS RoseRS_2834 NC_009523.1 3535665 3535910 R hypothetical protein complement(3535665..3535910) Roseiflexus sp. RS-1 5209803 YP_001277154.1 CDS RoseRS_2835 NC_009523.1 3535907 3536992 R hypothetical protein complement(3535907..3536992) Roseiflexus sp. RS-1 5209804 YP_001277155.1 CDS RoseRS_2836 NC_009523.1 3537228 3539825 D PFAM: metallophosphoesterase; metallophosphoesterase 3537228..3539825 Roseiflexus sp. RS-1 5209805 YP_001277156.1 CDS RoseRS_2837 NC_009523.1 3540203 3540577 D PFAM: protein of unknown function DUF59; hypothetical protein 3540203..3540577 Roseiflexus sp. RS-1 5209806 YP_001277157.1 CDS RoseRS_2838 NC_009523.1 3540606 3541610 D PFAM: amidohydrolase 2; amidohydrolase 2 3540606..3541610 Roseiflexus sp. RS-1 5209807 YP_001277158.1 CDS RoseRS_2839 NC_009523.1 3542081 3543649 D PFAM: Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 3542081..3543649 Roseiflexus sp. RS-1 5209808 YP_001277159.1 CDS RoseRS_2840 NC_009523.1 3543691 3544902 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3543691..3544902) Roseiflexus sp. RS-1 5209809 YP_001277160.1 CDS RoseRS_2841 NC_009523.1 3544908 3546170 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3544908..3546170) Roseiflexus sp. RS-1 5209810 YP_001277161.1 CDS RoseRS_2842 NC_009523.1 3546324 3548681 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase 3546324..3548681 Roseiflexus sp. RS-1 5209811 YP_001277162.1 CDS RoseRS_2843 NC_009523.1 3548906 3549868 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(3548906..3549868) Roseiflexus sp. RS-1 5209812 YP_001277163.1 CDS RoseRS_2844 NC_009523.1 3550643 3552616 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 3550643..3552616 Roseiflexus sp. RS-1 5209813 YP_001277164.1 CDS RoseRS_2846 NC_009523.1 3552834 3554198 D DNA uptake Rossmann fold nucleotide-binding protein 3552834..3554198 Roseiflexus sp. RS-1 5209815 YP_001277165.1 CDS RoseRS_2847 NC_009523.1 3554182 3556806 R PFAM: CBS domain containing protein; phosphoesterase, RecJ domain protein; Polynucleotide adenylyltransferase region; phosphoesterase, DHHA1; polynucleotide adenylyltransferase complement(3554182..3556806) Roseiflexus sp. RS-1 5209816 YP_001277166.1 CDS RoseRS_2848 NC_009523.1 3556797 3557228 R hypothetical protein complement(3556797..3557228) Roseiflexus sp. RS-1 5209817 YP_001277167.1 CDS RoseRS_2849 NC_009523.1 3557222 3558271 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(3557222..3558271) Roseiflexus sp. RS-1 5209818 YP_001277168.1 CDS RoseRS_2850 NC_009523.1 3558354 3559499 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(3558354..3559499) Roseiflexus sp. RS-1 5209819 YP_001277169.1 CDS RoseRS_2851 NC_009523.1 3559499 3560446 R TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein complement(3559499..3560446) Roseiflexus sp. RS-1 5209820 YP_001277170.1 CDS RoseRS_2852 NC_009523.1 3560786 3562510 R transposase complement(3560786..3562510) Roseiflexus sp. RS-1 5209821 YP_001277171.1 CDS RoseRS_2853 NC_009523.1 3562954 3563778 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(3562954..3563778) Roseiflexus sp. RS-1 5209822 YP_001277172.1 CDS RoseRS_2854 NC_009523.1 3563782 3564954 R PFAM: protein of unknown function DUF993; hypothetical protein complement(3563782..3564954) Roseiflexus sp. RS-1 5209823 YP_001277173.1 CDS RoseRS_2855 NC_009523.1 3564961 3566112 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(3564961..3566112) Roseiflexus sp. RS-1 5209824 YP_001277174.1 CDS RoseRS_2856 NC_009523.1 3566205 3567224 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(3566205..3567224) Roseiflexus sp. RS-1 5209825 YP_001277175.1 CDS RoseRS_2857 NC_009523.1 3567479 3568339 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3567479..3568339 Roseiflexus sp. RS-1 5209826 YP_001277176.1 CDS RoseRS_2858 NC_009523.1 3568381 3569232 D hypothetical protein 3568381..3569232 Roseiflexus sp. RS-1 5209827 YP_001277177.1 CDS RoseRS_2859 NC_009523.1 3569229 3570341 D PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 3569229..3570341 Roseiflexus sp. RS-1 5209828 YP_001277178.1 CDS RoseRS_2860 NC_009523.1 3570378 3571463 R PFAM: dihydroorotate dehydrogenase; dihydroorotate oxidase complement(3570378..3571463) Roseiflexus sp. RS-1 5209829 YP_001277179.1 CDS RoseRS_2861 NC_009523.1 3571554 3572339 R hypothetical protein complement(3571554..3572339) Roseiflexus sp. RS-1 5209830 YP_001277180.1 CDS RoseRS_2862 NC_009523.1 3572339 3573832 R TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; dihydroorotase, multifunctional complex type complement(3572339..3573832) Roseiflexus sp. RS-1 5209831 YP_001277181.1 CDS pyrB NC_009523.1 3573844 3574800 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(3573844..3574800) Roseiflexus sp. RS-1 5209832 YP_001277182.1 CDS RoseRS_2864 NC_009523.1 3574814 3575365 R PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase complement(3574814..3575365) Roseiflexus sp. RS-1 5209833 YP_001277183.1 CDS RoseRS_2865 NC_009523.1 3575371 3575808 R PFAM: cyclase/dehydrase; cyclase/dehydrase complement(3575371..3575808) Roseiflexus sp. RS-1 5209834 YP_001277184.1 CDS RoseRS_2866 NC_009523.1 3575951 3576451 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3575951..3576451 Roseiflexus sp. RS-1 5209835 YP_001277185.1 CDS RoseRS_2867 NC_009523.1 3576470 3577531 R TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase complement(3576470..3577531) Roseiflexus sp. RS-1 5209836 YP_001277186.1 CDS prfA NC_009523.1 3577646 3578740 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(3577646..3578740) Roseiflexus sp. RS-1 5209837 YP_001277187.1 CDS RoseRS_2869 NC_009523.1 3578800 3579408 D hypothetical protein 3578800..3579408 Roseiflexus sp. RS-1 5209838 YP_001277188.1 CDS RoseRS_2870 NC_009523.1 3579455 3586030 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin domain-containing protein complement(3579455..3586030) Roseiflexus sp. RS-1 5209839 YP_001277189.1 CDS RoseRS_2871 NC_009523.1 3586063 3588645 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein complement(3586063..3588645) Roseiflexus sp. RS-1 5209840 YP_001277190.1 CDS RoseRS_2872 NC_009523.1 3588761 3589639 D PFAM: metallophosphoesterase; metallophosphoesterase 3588761..3589639 Roseiflexus sp. RS-1 5209841 YP_001277191.1 CDS RoseRS_2873 NC_009523.1 3589641 3590438 R hypothetical protein complement(3589641..3590438) Roseiflexus sp. RS-1 5209842 YP_001277192.1 CDS RoseRS_2874 NC_009523.1 3590474 3591271 R hypothetical protein complement(3590474..3591271) Roseiflexus sp. RS-1 5209843 YP_001277193.1 CDS RoseRS_2875 NC_009523.1 3591363 3591629 D PFAM: protein of unknown function UPF0153; hypothetical protein 3591363..3591629 Roseiflexus sp. RS-1 5209844 YP_001277194.1 CDS RoseRS_2876 NC_009523.1 3591645 3592076 D PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 3591645..3592076 Roseiflexus sp. RS-1 5209845 YP_001277195.1 CDS RoseRS_2877 NC_009523.1 3592078 3593271 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 3592078..3593271 Roseiflexus sp. RS-1 5209846 YP_001277196.1 CDS RoseRS_2878 NC_009523.1 3593411 3593704 R hypothetical protein complement(3593411..3593704) Roseiflexus sp. RS-1 5209847 YP_001277197.1 CDS RoseRS_2879 NC_009523.1 3593963 3594349 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3593963..3594349 Roseiflexus sp. RS-1 5209848 YP_001277198.1 CDS RoseRS_2880 NC_009523.1 3594388 3595551 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein 3594388..3595551 Roseiflexus sp. RS-1 5209849 YP_001277199.1 CDS RoseRS_2881 NC_009523.1 3595681 3596679 D PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3595681..3596679 Roseiflexus sp. RS-1 5209850 YP_001277200.1 CDS RoseRS_2882 NC_009523.1 3596782 3597558 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 3596782..3597558 Roseiflexus sp. RS-1 5209851 YP_001277201.1 CDS RoseRS_2883 NC_009523.1 3597669 3598091 D hypothetical protein 3597669..3598091 Roseiflexus sp. RS-1 5209852 YP_001277202.1 CDS RoseRS_2884 NC_009523.1 3598119 3599288 D catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 3598119..3599288 Roseiflexus sp. RS-1 5209853 YP_001277203.1 CDS RoseRS_2885 NC_009523.1 3599559 3602534 D PFAM: PKD domain containing protein; PKD domain-containing protein 3599559..3602534 Roseiflexus sp. RS-1 5209854 YP_001277204.1 CDS RoseRS_2886 NC_009523.1 3602723 3604237 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; xylulokinase 3602723..3604237 Roseiflexus sp. RS-1 5209855 YP_001277205.1 CDS RoseRS_2887 NC_009523.1 3604350 3605045 D hypothetical protein 3604350..3605045 Roseiflexus sp. RS-1 5209856 YP_001277206.1 CDS RoseRS_2888 NC_009523.1 3605049 3606191 R hypothetical protein complement(3605049..3606191) Roseiflexus sp. RS-1 5209857 YP_001277207.1 CDS RoseRS_2889 NC_009523.1 3606405 3607082 D hypothetical protein 3606405..3607082 Roseiflexus sp. RS-1 5209858 YP_001277208.1 CDS RoseRS_2890 NC_009523.1 3607512 3608591 D catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 3607512..3608591 Roseiflexus sp. RS-1 5209859 YP_001277209.1 CDS RoseRS_2891 NC_009523.1 3608908 3610314 R PFAM: glycoside hydrolase, family 4; glycoside hydrolase family protein complement(3608908..3610314) Roseiflexus sp. RS-1 5209860 YP_001277210.1 CDS RoseRS_2892 NC_009523.1 3610368 3611141 R hypothetical protein complement(3610368..3611141) Roseiflexus sp. RS-1 5209861 YP_001277211.1 CDS RoseRS_2893 NC_009523.1 3611155 3612855 R PFAM: FG-GAP repeat protein; FG-GAP repeat-containing protein complement(3611155..3612855) Roseiflexus sp. RS-1 5209862 YP_001277212.1 CDS RoseRS_2894 NC_009523.1 3612863 3613756 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3612863..3613756) Roseiflexus sp. RS-1 5209863 YP_001277213.1 CDS RoseRS_2895 NC_009523.1 3613769 3614719 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3613769..3614719) Roseiflexus sp. RS-1 5209864 YP_001277214.1 CDS RoseRS_2896 NC_009523.1 3614809 3616167 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(3614809..3616167) Roseiflexus sp. RS-1 5209865 YP_001277215.1 CDS RoseRS_2897 NC_009523.1 3616632 3617615 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 3616632..3617615 Roseiflexus sp. RS-1 5209866 YP_001277216.1 CDS RoseRS_2898 NC_009523.1 3618149 3618382 R hypothetical protein complement(3618149..3618382) Roseiflexus sp. RS-1 5209867 YP_001277217.1 CDS RoseRS_2899 NC_009523.1 3618427 3619308 D PFAM: metallophosphoesterase; metallophosphoesterase 3618427..3619308 Roseiflexus sp. RS-1 5209868 YP_001277218.1 CDS RoseRS_2900 NC_009523.1 3619365 3620327 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(3619365..3620327) Roseiflexus sp. RS-1 5209869 YP_001277219.1 CDS RoseRS_2901 NC_009523.1 3620813 3621166 R hypothetical protein complement(3620813..3621166) Roseiflexus sp. RS-1 5209870 YP_001277220.1 CDS RoseRS_2902 NC_009523.1 3621576 3622049 R response regulator receiver protein complement(3621576..3622049) Roseiflexus sp. RS-1 5209871 YP_001277221.1 CDS RoseRS_2903 NC_009523.1 3622495 3623037 R hypothetical protein complement(3622495..3623037) Roseiflexus sp. RS-1 5209872 YP_001277222.1 CDS RoseRS_2904 NC_009523.1 3623203 3624840 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 3623203..3624840 Roseiflexus sp. RS-1 5209873 YP_001277223.1 CDS RoseRS_2905 NC_009523.1 3624854 3634585 D PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; XYPPX repeat-containing protein; phosphopantetheine-binding; KR; beta-ketoacyl synthase 3624854..3634585 Roseiflexus sp. RS-1 5209874 YP_001277224.1 CDS RoseRS_2906 NC_009523.1 3634655 3635416 D phosphopantetheinyl transferase-like protein 3634655..3635416 Roseiflexus sp. RS-1 5209875 YP_001277225.1 CDS RoseRS_2907 NC_009523.1 3635413 3636957 D PFAM: carboxyl transferase; propionyl-CoA carboxylase 3635413..3636957 Roseiflexus sp. RS-1 5209876 YP_001277226.1 CDS RoseRS_2908 NC_009523.1 3636969 3638450 D PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin carboxylase 3636969..3638450 Roseiflexus sp. RS-1 5209877 YP_001277227.1 CDS RoseRS_2909 NC_009523.1 3638462 3638956 D PFAM: biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 3638462..3638956 Roseiflexus sp. RS-1 5209878 YP_001277228.1 CDS RoseRS_2910 NC_009523.1 3639631 3640332 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(3639631..3640332) Roseiflexus sp. RS-1 5209879 YP_001277229.1 CDS RoseRS_2911 NC_009523.1 3640346 3640717 R hypothetical protein complement(3640346..3640717) Roseiflexus sp. RS-1 5209880 YP_001277230.1 CDS RoseRS_2912 NC_009523.1 3640721 3641314 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; electron transport protein SCO1/SenC complement(3640721..3641314) Roseiflexus sp. RS-1 5209881 YP_001277231.1 CDS RoseRS_2913 NC_009523.1 3641590 3643575 D hypothetical protein 3641590..3643575 Roseiflexus sp. RS-1 5209882 YP_001277232.1 CDS RoseRS_2914 NC_009523.1 3643617 3643988 D PFAM: ferredoxin; ferredoxin 3643617..3643988 Roseiflexus sp. RS-1 5209883 YP_001277233.1 CDS RoseRS_2915 NC_009523.1 3644400 3645362 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(3644400..3645362) Roseiflexus sp. RS-1 5209884 YP_001277234.1 CDS RoseRS_2916 NC_009523.1 3646281 3646670 D hypothetical protein 3646281..3646670 Roseiflexus sp. RS-1 5209885 YP_001277235.1 CDS RoseRS_2917 NC_009523.1 3646684 3646947 D hypothetical protein 3646684..3646947 Roseiflexus sp. RS-1 5209886 YP_001277236.1 CDS RoseRS_2918 NC_009523.1 3648425 3648799 R hypothetical protein complement(3648425..3648799) Roseiflexus sp. RS-1 5209887 YP_001277237.1 CDS RoseRS_2919 NC_009523.1 3649363 3652605 R PFAM: protein of unknown function DUF323; hypothetical protein complement(3649363..3652605) Roseiflexus sp. RS-1 5209888 YP_001277238.1 CDS RoseRS_2920 NC_009523.1 3653265 3654227 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 3653265..3654227 Roseiflexus sp. RS-1 5209889 YP_001277239.1 CDS RoseRS_2921 NC_009523.1 3655657 3658263 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase complement(3655657..3658263) Roseiflexus sp. RS-1 5209890 YP_001277240.1 CDS RoseRS_2922 NC_009523.1 3658462 3659259 D hypothetical protein 3658462..3659259 Roseiflexus sp. RS-1 5209891 YP_001277241.1 CDS RoseRS_2923 NC_009523.1 3659590 3660252 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; pyrimidine 5'-nucleotidase 3659590..3660252 Roseiflexus sp. RS-1 5209892 YP_001277242.1 CDS RoseRS_2924 NC_009523.1 3660354 3661310 R PFAM: band 7 protein; hypothetical protein complement(3660354..3661310) Roseiflexus sp. RS-1 5209893 YP_001277243.1 CDS RoseRS_2925 NC_009523.1 3661590 3662846 R PFAM: amine oxidase; FAD dependent oxidoreductase; amine oxidase complement(3661590..3662846) Roseiflexus sp. RS-1 5209894 YP_001277244.1 CDS RoseRS_2926 NC_009523.1 3662897 3663322 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3662897..3663322 Roseiflexus sp. RS-1 5209895 YP_001277245.1 CDS RoseRS_2927 NC_009523.1 3663364 3664086 D hypothetical protein 3663364..3664086 Roseiflexus sp. RS-1 5209896 YP_001277246.1 CDS RoseRS_2928 NC_009523.1 3664128 3665732 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 3664128..3665732 Roseiflexus sp. RS-1 5209897 YP_001277247.1 CDS RoseRS_2929 NC_009523.1 3665869 3666495 R hypothetical protein complement(3665869..3666495) Roseiflexus sp. RS-1 5209898 YP_001277248.1 CDS RoseRS_2930 NC_009523.1 3666623 3667066 D hypothetical protein 3666623..3667066 Roseiflexus sp. RS-1 5209899 YP_001277249.1 CDS RoseRS_2931 NC_009523.1 3667053 3667721 D PFAM: phospholipase/Carboxylesterase; phospholipase/carboxylesterase 3667053..3667721 Roseiflexus sp. RS-1 5209900 YP_001277250.1 CDS RoseRS_2932 NC_009523.1 3667752 3668183 D hypothetical protein 3667752..3668183 Roseiflexus sp. RS-1 5209901 YP_001277251.1 CDS RoseRS_2933 NC_009523.1 3668279 3668560 D hypothetical protein 3668279..3668560 Roseiflexus sp. RS-1 5209902 YP_001277252.1 CDS RoseRS_2934 NC_009523.1 3668541 3668879 D transcriptional modulator of MazE/toxin MazF 3668541..3668879 Roseiflexus sp. RS-1 5209903 YP_001277253.1 CDS RoseRS_2935 NC_009523.1 3668907 3669254 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3668907..3669254 Roseiflexus sp. RS-1 5209904 YP_001277254.1 CDS RoseRS_2936 NC_009523.1 3669436 3670170 D PFAM: protein of unknown function DUF820; hypothetical protein 3669436..3670170 Roseiflexus sp. RS-1 5209905 YP_001277255.1 CDS RoseRS_2937 NC_009523.1 3670182 3670910 D PFAM: protein of unknown function DUF820; hypothetical protein 3670182..3670910 Roseiflexus sp. RS-1 5209906 YP_001277256.1 CDS RoseRS_2938 NC_009523.1 3671153 3671473 D hypothetical protein 3671153..3671473 Roseiflexus sp. RS-1 5209907 YP_001277257.1 CDS RoseRS_2939 NC_009523.1 3671534 3674314 D PFAM: N-6 DNA methylase; N-6 DNA methylase 3671534..3674314 Roseiflexus sp. RS-1 5209908 YP_001277258.1 CDS RoseRS_2940 NC_009523.1 3674304 3675368 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 3674304..3675368 Roseiflexus sp. RS-1 5209909 YP_001277259.1 CDS RoseRS_2941 NC_009523.1 3675659 3676621 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 3675659..3676621 Roseiflexus sp. RS-1 5209910 YP_001277260.1 CDS RoseRS_2943 NC_009523.1 3678302 3680392 R superfamily I DNA/RNA helicase-like protein complement(3678302..3680392) Roseiflexus sp. RS-1 5209912 YP_001277261.1 CDS RoseRS_2946 NC_009523.1 3683818 3686874 R PFAM: type III restriction enzyme, res subunit; type III restriction enzyme, res subunit complement(3683818..3686874) Roseiflexus sp. RS-1 5209914 YP_001277262.1 CDS gatA NC_009523.1 3687409 3688872 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(3687409..3688872) Roseiflexus sp. RS-1 5209915 YP_001277263.1 CDS RoseRS_2948 NC_009523.1 3688872 3690302 R PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase complement(3688872..3690302) Roseiflexus sp. RS-1 5209916 YP_001277264.1 CDS RoseRS_2949 NC_009523.1 3690307 3691206 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3690307..3691206) Roseiflexus sp. RS-1 5209917 YP_001277265.1 CDS trpA NC_009523.1 3691345 3692130 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(3691345..3692130) Roseiflexus sp. RS-1 5209918 YP_001277266.1 CDS RoseRS_2951 NC_009523.1 3692262 3692624 D hypothetical protein 3692262..3692624 Roseiflexus sp. RS-1 5209919 YP_001277267.1 CDS RoseRS_2952 NC_009523.1 3692720 3695107 R PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region complement(3692720..3695107) Roseiflexus sp. RS-1 5209920 YP_001277268.1 CDS RoseRS_2953 NC_009523.1 3695126 3695566 R PFAM: protein of unknown function DUF86; hypothetical protein complement(3695126..3695566) Roseiflexus sp. RS-1 5209921 YP_001277269.1 CDS RoseRS_2954 NC_009523.1 3695563 3695964 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(3695563..3695964) Roseiflexus sp. RS-1 5209922 YP_001277270.1 CDS RoseRS_2955 NC_009523.1 3696051 3696620 R TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(3696051..3696620) Roseiflexus sp. RS-1 5209923 YP_001277271.1 CDS RoseRS_2956 NC_009523.1 3696661 3697077 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3696661..3697077 Roseiflexus sp. RS-1 5209924 YP_001277272.1 CDS RoseRS_2957 NC_009523.1 3697146 3699335 R hypothetical protein complement(3697146..3699335) Roseiflexus sp. RS-1 5209925 YP_001277273.1 CDS RoseRS_2958 NC_009523.1 3699360 3700574 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3699360..3700574) Roseiflexus sp. RS-1 5209926 YP_001277274.1 CDS RoseRS_2959 NC_009523.1 3700954 3703794 R hypothetical protein complement(3700954..3703794) Roseiflexus sp. RS-1 5209927 YP_001277275.1 CDS RoseRS_2960 NC_009523.1 3703866 3704255 D TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; putative endoribonuclease L-PSP 3703866..3704255 Roseiflexus sp. RS-1 5209928 YP_001277276.1 CDS RoseRS_2962 NC_009523.1 3705521 3705958 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 3705521..3705958 Roseiflexus sp. RS-1 5209930 YP_001277277.1 CDS RoseRS_2963 NC_009523.1 3706411 3708885 D PFAM: regulatory protein, LuxR; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; Sigma-70, region 4 type 2; SMART: Tetratricopeptide domain protein; regulatory protein LuxR 3706411..3708885 Roseiflexus sp. RS-1 5209931 YP_001277278.1 CDS RoseRS_2964 NC_009523.1 3709286 3711355 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase complement(3709286..3711355) Roseiflexus sp. RS-1 5209932 YP_001277279.1 CDS RoseRS_2965 NC_009523.1 3711358 3712020 R PFAM: O-methyltransferase, family 3; O-methyltransferase family protein complement(3711358..3712020) Roseiflexus sp. RS-1 5209933 YP_001277280.1 CDS RoseRS_2966 NC_009523.1 3712253 3713032 R PFAM: rhodopsin; rhodopsin complement(3712253..3713032) Roseiflexus sp. RS-1 5209934 YP_001277281.1 CDS RoseRS_2967 NC_009523.1 3713571 3714866 R PFAM: glycoside hydrolase, family 1; glycoside hydrolase family protein complement(3713571..3714866) Roseiflexus sp. RS-1 5209935 YP_001277282.1 CDS RoseRS_2968 NC_009523.1 3715960 3717741 R hypothetical protein complement(3715960..3717741) Roseiflexus sp. RS-1 5209936 YP_001277283.1 CDS RoseRS_2969 NC_009523.1 3717890 3719065 R TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(3717890..3719065) Roseiflexus sp. RS-1 5209937 YP_001277284.1 CDS RoseRS_2970 NC_009523.1 3719151 3721574 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase complement(3719151..3721574) Roseiflexus sp. RS-1 5209938 YP_001277285.1 CDS RoseRS_2971 NC_009523.1 3721653 3722909 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(3721653..3722909) Roseiflexus sp. RS-1 5209939 YP_001277286.1 CDS RoseRS_2972 NC_009523.1 3722921 3724015 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(3722921..3724015) Roseiflexus sp. RS-1 5209940 YP_001277287.1 CDS RoseRS_2973 NC_009523.1 3724074 3724625 R hypothetical protein complement(3724074..3724625) Roseiflexus sp. RS-1 5209941 YP_001277288.1 CDS RoseRS_2974 NC_009523.1 3724926 3725504 R hypothetical protein complement(3724926..3725504) Roseiflexus sp. RS-1 5209942 YP_001277289.1 CDS RoseRS_2975 NC_009523.1 3725946 3727205 D PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor 3725946..3727205 Roseiflexus sp. RS-1 5209943 YP_001277290.1 CDS RoseRS_2976 NC_009523.1 3727310 3728491 D PFAM: inner-membrane translocator; inner-membrane translocator 3727310..3728491 Roseiflexus sp. RS-1 5209944 YP_001277291.1 CDS RoseRS_2977 NC_009523.1 3728496 3729860 D PFAM: inner-membrane translocator; inner-membrane translocator 3728496..3729860 Roseiflexus sp. RS-1 5209945 YP_001277292.1 CDS RoseRS_2978 NC_009523.1 3729872 3730669 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3729872..3730669 Roseiflexus sp. RS-1 5209946 YP_001277293.1 CDS RoseRS_2979 NC_009523.1 3731244 3731957 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3731244..3731957 Roseiflexus sp. RS-1 5209947 YP_001277294.1 CDS RoseRS_2980 NC_009523.1 3732010 3732573 D hypothetical protein 3732010..3732573 Roseiflexus sp. RS-1 5209948 YP_001277295.1 CDS RoseRS_2981 NC_009523.1 3732589 3735123 R TIGRFAM: alanine racemase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; alanine racemase domain protein; Mur ligase, middle domain protein; alanine racemase complement(3732589..3735123) Roseiflexus sp. RS-1 5209949 YP_001277296.1 CDS RoseRS_2982 NC_009523.1 3735241 3736356 D PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 3735241..3736356 Roseiflexus sp. RS-1 5209950 YP_001277297.1 CDS RoseRS_2983 NC_009523.1 3736602 3738026 D TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase, type I 3736602..3738026 Roseiflexus sp. RS-1 5209951 YP_001277298.1 CDS RoseRS_2984 NC_009523.1 3738394 3739830 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; ammonium transporter 3738394..3739830 Roseiflexus sp. RS-1 5209952 YP_001277299.1 CDS RoseRS_2985 NC_009523.1 3740282 3744946 D PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; glutamate synthase 3740282..3744946 Roseiflexus sp. RS-1 5209953 YP_001277300.1 CDS RoseRS_2986 NC_009523.1 3746273 3750154 D PFAM: NHL repeat containing protein; PA14 domain protein; SMART: PA14-related domain protein; PA14 domain-containing protein 3746273..3750154 Roseiflexus sp. RS-1 5209954 YP_001277301.1 CDS RoseRS_2987 NC_009523.1 3750681 3751742 R PFAM: homoserine dehydrogenase; homoserine dehydrogenase, NAD-binding; homoserine dehydrogenase complement(3750681..3751742) Roseiflexus sp. RS-1 5209955 YP_001277302.1 CDS RoseRS_2988 NC_009523.1 3751862 3752425 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3751862..3752425 Roseiflexus sp. RS-1 5209956 YP_001277303.1 CDS RoseRS_2989 NC_009523.1 3752619 3752975 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 3752619..3752975 Roseiflexus sp. RS-1 5209957 YP_001277304.1 CDS RoseRS_2990 NC_009523.1 3753287 3754093 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3753287..3754093 Roseiflexus sp. RS-1 5209958 YP_001277305.1 CDS RoseRS_2991 NC_009523.1 3754134 3754640 D TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 3754134..3754640 Roseiflexus sp. RS-1 5209959 YP_001277306.1 CDS RoseRS_2992 NC_009523.1 3754672 3755796 D PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (quinone) 3754672..3755796 Roseiflexus sp. RS-1 5209960 YP_001277307.1 CDS RoseRS_2993 NC_009523.1 3755930 3757252 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3755930..3757252 Roseiflexus sp. RS-1 5209961 YP_001277308.1 CDS RoseRS_2994 NC_009523.1 3757264 3758622 D PFAM: respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) 3757264..3758622 Roseiflexus sp. RS-1 5209962 YP_001277309.1 CDS RoseRS_2995 NC_009523.1 3758662 3759309 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 3758662..3759309 Roseiflexus sp. RS-1 5209963 YP_001277310.1 CDS RoseRS_2996 NC_009523.1 3759364 3759690 D PFAM: NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase, chain 4L 3759364..3759690 Roseiflexus sp. RS-1 5209964 YP_001277311.1 CDS RoseRS_2997 NC_009523.1 3759956 3762133 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 3759956..3762133 Roseiflexus sp. RS-1 5209965 YP_001277312.1 CDS RoseRS_2998 NC_009523.1 3762199 3763884 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 3762199..3763884 Roseiflexus sp. RS-1 5209966 YP_001277313.1 CDS RoseRS_2999 NC_009523.1 3763910 3765433 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 3763910..3765433 Roseiflexus sp. RS-1 5209967 YP_001277314.1 CDS RoseRS_3000 NC_009523.1 3765637 3767259 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 3765637..3767259 Roseiflexus sp. RS-1 5209968 YP_001277315.1 CDS RoseRS_3001 NC_009523.1 3767301 3767864 D hypothetical protein 3767301..3767864 Roseiflexus sp. RS-1 5209969 YP_001277316.1 CDS RoseRS_3002 NC_009523.1 3768047 3769981 D hypothetical protein 3768047..3769981 Roseiflexus sp. RS-1 5209970 YP_001277317.1 CDS RoseRS_3003 NC_009523.1 3770121 3771536 D TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; dihydrolipoamide dehydrogenase 3770121..3771536 Roseiflexus sp. RS-1 5209971 YP_001277318.1 CDS RoseRS_3004 NC_009523.1 3771549 3771929 D hypothetical protein 3771549..3771929 Roseiflexus sp. RS-1 5209972 YP_001277319.1 CDS RoseRS_3005 NC_009523.1 3772099 3772734 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(3772099..3772734) Roseiflexus sp. RS-1 5209973 YP_001277320.1 CDS RoseRS_3006 NC_009523.1 3773051 3775498 R ATP-dependent protease-like protein complement(3773051..3775498) Roseiflexus sp. RS-1 5209974 YP_001277321.1 CDS RoseRS_3007 NC_009523.1 3775570 3776511 R TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; putative agmatinase complement(3775570..3776511) Roseiflexus sp. RS-1 5209975 YP_001277322.1 CDS RoseRS_3008 NC_009523.1 3776783 3779731 R PFAM: von Willebrand factor, type A; peptidase M23B; peptidase M23B complement(3776783..3779731) Roseiflexus sp. RS-1 5209976 YP_001277323.1 CDS RoseRS_3009 NC_009523.1 3786481 3788568 D transcriptional regulator-like protein 3786481..3788568 Roseiflexus sp. RS-1 5209977 YP_001277324.1 CDS RoseRS_3010 NC_009523.1 3788537 3788812 R TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; CRISPR-associated Cas2 family protein complement(3788537..3788812) Roseiflexus sp. RS-1 5209978 YP_001277325.1 CDS RoseRS_3011 NC_009523.1 3788945 3791269 R PFAM: von Willebrand factor, type A; von Willebrand factor, type A complement(3788945..3791269) Roseiflexus sp. RS-1 5209979 YP_001277326.1 CDS RoseRS_3012 NC_009523.1 3791391 3792389 R TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated Cas1 family protein complement(3791391..3792389) Roseiflexus sp. RS-1 5209980 YP_001277327.1 CDS RoseRS_3013 NC_009523.1 3792897 3794231 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); RNA-directed DNA polymerase complement(3792897..3794231) Roseiflexus sp. RS-1 5209981 YP_001277328.1 CDS RoseRS_3014 NC_009523.1 3794264 3794728 R hypothetical protein complement(3794264..3794728) Roseiflexus sp. RS-1 5209982 YP_001277329.1 CDS RoseRS_3015 NC_009523.1 3794725 3794913 R hypothetical protein complement(3794725..3794913) Roseiflexus sp. RS-1 5209983 YP_001277330.1 CDS RoseRS_3016 NC_009523.1 3795557 3796078 R nucleic acid binding protein complement(3795557..3796078) Roseiflexus sp. RS-1 5209984 YP_001277331.1 CDS RoseRS_3017 NC_009523.1 3796075 3796377 R PFAM: protein of unknown function UPF0175; hypothetical protein complement(3796075..3796377) Roseiflexus sp. RS-1 5209985 YP_001277332.1 CDS RoseRS_3018 NC_009523.1 3797218 3797595 R hypothetical protein complement(3797218..3797595) Roseiflexus sp. RS-1 5209986 YP_001277333.1 CDS RoseRS_3019 NC_009523.1 3797592 3798251 R hypothetical protein complement(3797592..3798251) Roseiflexus sp. RS-1 5209987 YP_001277334.1 CDS RoseRS_3020 NC_009523.1 3798319 3799377 R transcriptional regulator-like protein complement(3798319..3799377) Roseiflexus sp. RS-1 5209988 YP_001277335.1 CDS RoseRS_3021 NC_009523.1 3799388 3800785 R hypothetical protein complement(3799388..3800785) Roseiflexus sp. RS-1 5209989 YP_001277336.1 CDS RoseRS_3022 NC_009523.1 3801040 3801306 R hypothetical protein complement(3801040..3801306) Roseiflexus sp. RS-1 5209990 YP_001277337.1 CDS RoseRS_3023 NC_009523.1 3801782 3803332 R hypothetical protein complement(3801782..3803332) Roseiflexus sp. RS-1 5209991 YP_001277338.1 CDS RoseRS_3024 NC_009523.1 3803688 3804785 D hypothetical protein 3803688..3804785 Roseiflexus sp. RS-1 5209992 YP_001277339.1 CDS RoseRS_3025 NC_009523.1 3804795 3806036 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; 2-alkenal reductase complement(3804795..3806036) Roseiflexus sp. RS-1 5209993 YP_001277340.1 CDS RoseRS_3026 NC_009523.1 3806240 3808699 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; nitrogen specific signal transduction histidine kinase NtrB 3806240..3808699 Roseiflexus sp. RS-1 5209994 YP_001277341.1 CDS RoseRS_3027 NC_009523.1 3808812 3809774 D PFAM: initiation factor 2B related; initiation factor 2B-like protein 3808812..3809774 Roseiflexus sp. RS-1 5209995 YP_001277342.1 CDS RoseRS_3028 NC_009523.1 3809912 3810439 D hypothetical protein 3809912..3810439 Roseiflexus sp. RS-1 5209996 YP_001277343.1 CDS RoseRS_3029 NC_009523.1 3810436 3811464 D hypothetical protein 3810436..3811464 Roseiflexus sp. RS-1 5209997 YP_001277344.1 CDS RoseRS_3030 NC_009523.1 3811464 3812078 D PFAM: peptidase M23B; peptidase M23B 3811464..3812078 Roseiflexus sp. RS-1 5209998 YP_001277345.1 CDS RoseRS_3031 NC_009523.1 3812368 3812994 D hypothetical protein 3812368..3812994 Roseiflexus sp. RS-1 5209999 YP_001277346.1 CDS RoseRS_3032 NC_009523.1 3813001 3813474 R hypothetical protein complement(3813001..3813474) Roseiflexus sp. RS-1 5210000 YP_001277347.1 CDS RoseRS_3033 NC_009523.1 3813561 3814778 D PFAM: protein of unknown function DUF1006; hypothetical protein 3813561..3814778 Roseiflexus sp. RS-1 5210001 YP_001277348.1 CDS RoseRS_3034 NC_009523.1 3815037 3815291 D TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein 3815037..3815291 Roseiflexus sp. RS-1 5210002 YP_001277349.1 CDS RoseRS_3035 NC_009523.1 3815468 3816253 D TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase 3815468..3816253 Roseiflexus sp. RS-1 5210003 YP_001277350.1 CDS cysS NC_009523.1 3816259 3817695 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 3816259..3817695 Roseiflexus sp. RS-1 5210004 YP_001277351.1 CDS RoseRS_3037 NC_009523.1 3817692 3818717 D TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 3817692..3818717 Roseiflexus sp. RS-1 5210005 YP_001277352.1 CDS RoseRS_3038 NC_009523.1 3818698 3819480 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3818698..3819480 Roseiflexus sp. RS-1 5210006 YP_001277353.1 CDS RoseRS_3039 NC_009523.1 3819523 3820860 D TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 3819523..3820860 Roseiflexus sp. RS-1 5210007 YP_001277354.1 CDS RoseRS_3040 NC_009523.1 3821124 3821522 R PFAM: HEPN domain protein; HEPN domain-containing protein complement(3821124..3821522) Roseiflexus sp. RS-1 5210008 YP_001277355.1 CDS RoseRS_3041 NC_009523.1 3821506 3821856 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(3821506..3821856) Roseiflexus sp. RS-1 5210009 YP_001277356.1 CDS RoseRS_3042 NC_009523.1 3821877 3822164 R hypothetical protein complement(3821877..3822164) Roseiflexus sp. RS-1 5210010 YP_001277357.1 CDS RoseRS_3043 NC_009523.1 3822165 3823028 R PFAM: D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase complement(3822165..3823028) Roseiflexus sp. RS-1 5210011 YP_001277358.1 CDS RoseRS_3044 NC_009523.1 3823034 3824164 R hypothetical protein complement(3823034..3824164) Roseiflexus sp. RS-1 5210012 YP_001277359.1 CDS RoseRS_3045 NC_009523.1 3824487 3824933 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(3824487..3824933) Roseiflexus sp. RS-1 5210013 YP_001277360.1 CDS RoseRS_3046 NC_009523.1 3824920 3825132 R hypothetical protein complement(3824920..3825132) Roseiflexus sp. RS-1 5210014 YP_001277361.1 CDS RoseRS_3047 NC_009523.1 3825359 3826354 R hypothetical protein complement(3825359..3826354) Roseiflexus sp. RS-1 5210015 YP_001277362.1 CDS RoseRS_3048 NC_009523.1 3826423 3827553 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3826423..3827553) Roseiflexus sp. RS-1 5210016 YP_001277363.1 CDS RoseRS_3049 NC_009523.1 3827575 3828561 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3827575..3828561) Roseiflexus sp. RS-1 5210017 YP_001277364.1 CDS RoseRS_3050 NC_009523.1 3828692 3830965 R PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(3828692..3830965) Roseiflexus sp. RS-1 5210018 YP_001277365.1 CDS RoseRS_3051 NC_009523.1 3831188 3831718 R hypothetical protein complement(3831188..3831718) Roseiflexus sp. RS-1 5210019 YP_001277366.1 CDS RoseRS_3052 NC_009523.1 3831774 3832499 R hypothetical protein complement(3831774..3832499) Roseiflexus sp. RS-1 5210020 YP_001277367.1 CDS RoseRS_3053 NC_009523.1 3832572 3834950 R PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: Animal peptidoglycan recognition protein PGRP; N-acetylmuramoyl-L-alanine amidase complement(3832572..3834950) Roseiflexus sp. RS-1 5210021 YP_001277368.1 CDS RoseRS_3054 NC_009523.1 3834991 3837036 R hypothetical protein complement(3834991..3837036) Roseiflexus sp. RS-1 5210022 YP_001277369.1 CDS RoseRS_3055 NC_009523.1 3837147 3838109 R PFAM: inner-membrane translocator; inner-membrane translocator complement(3837147..3838109) Roseiflexus sp. RS-1 5210023 YP_001277370.1 CDS RoseRS_3056 NC_009523.1 3838106 3839074 R PFAM: inner-membrane translocator; monosaccharide-transporting ATPase complement(3838106..3839074) Roseiflexus sp. RS-1 5210024 YP_001277371.1 CDS RoseRS_3057 NC_009523.1 3839071 3840588 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3839071..3840588) Roseiflexus sp. RS-1 5210025 YP_001277372.1 CDS RoseRS_3058 NC_009523.1 3840593 3841705 R sugar ABC transporter periplasmic component-like protein complement(3840593..3841705) Roseiflexus sp. RS-1 5210026 YP_001277373.1 CDS RoseRS_3059 NC_009523.1 3842132 3844057 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase complement(3842132..3844057) Roseiflexus sp. RS-1 5210027 YP_001277374.1 CDS RoseRS_3060 NC_009523.1 3844054 3844497 R PFAM: response regulator receiver; response regulator receiver protein complement(3844054..3844497) Roseiflexus sp. RS-1 5210028 YP_001277375.1 CDS RoseRS_3061 NC_009523.1 3844457 3846571 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(3844457..3846571) Roseiflexus sp. RS-1 5210029 YP_001277376.1 CDS RoseRS_3062 NC_009523.1 3846830 3847513 R PFAM: TrkA-N domain protein; TrkA-C domain protein; TrkA domain-containing protein complement(3846830..3847513) Roseiflexus sp. RS-1 5210030 YP_001277377.1 CDS RoseRS_3063 NC_009523.1 3847517 3848161 R PFAM: TrkA-N domain protein; TrkA-C domain protein; TrkA domain-containing protein complement(3847517..3848161) Roseiflexus sp. RS-1 5210031 YP_001277378.1 CDS RoseRS_3064 NC_009523.1 3848179 3850974 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; HAD superfamily ATPase complement(3848179..3850974) Roseiflexus sp. RS-1 5210032 YP_001277379.1 CDS RoseRS_3065 NC_009523.1 3851561 3852115 R hypothetical protein complement(3851561..3852115) Roseiflexus sp. RS-1 5210033 YP_001277380.1 CDS RoseRS_3067 NC_009523.1 3854503 3855654 R PFAM: ABC-3 protein; ABC-3 protein complement(3854503..3855654) Roseiflexus sp. RS-1 5210035 YP_001277381.1 CDS RoseRS_3068 NC_009523.1 3855656 3856543 R PFAM: ABC-3 protein; ABC-3 protein complement(3855656..3856543) Roseiflexus sp. RS-1 5210036 YP_001277382.1 CDS RoseRS_3069 NC_009523.1 3856558 3857346 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3856558..3857346) Roseiflexus sp. RS-1 5210037 YP_001277383.1 CDS RoseRS_3070 NC_009523.1 3857361 3858308 R PFAM: periplasmic solute binding protein; periplasmic solute binding protein complement(3857361..3858308) Roseiflexus sp. RS-1 5210038 YP_001277384.1 CDS RoseRS_3071 NC_009523.1 3858614 3859192 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; peroxidase-like protein 3858614..3859192 Roseiflexus sp. RS-1 5210039 YP_001277385.1 CDS RoseRS_3072 NC_009523.1 3859222 3860760 D hypothetical protein 3859222..3860760 Roseiflexus sp. RS-1 5210040 YP_001277386.1 CDS RoseRS_3073 NC_009523.1 3860857 3862584 R hypothetical protein complement(3860857..3862584) Roseiflexus sp. RS-1 5210041 YP_001277387.1 CDS RoseRS_3074 NC_009523.1 3862887 3863888 D PFAM: aldo/keto reductase; aldo/keto reductase 3862887..3863888 Roseiflexus sp. RS-1 5210042 YP_001277388.1 CDS RoseRS_3075 NC_009523.1 3864128 3865075 D TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 3864128..3865075 Roseiflexus sp. RS-1 5210043 YP_001277389.1 CDS rpsT NC_009523.1 3865082 3865354 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(3865082..3865354) Roseiflexus sp. RS-1 5210044 YP_001277390.1 CDS RoseRS_3077 NC_009523.1 3865553 3867184 D TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; integral membrane protein MviN 3865553..3867184 Roseiflexus sp. RS-1 5210045 YP_001277391.1 CDS RoseRS_3078 NC_009523.1 3868192 3869250 R TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; aspartate-semialdehyde dehydrogenase complement(3868192..3869250) Roseiflexus sp. RS-1 5210046 YP_001277392.1 CDS RoseRS_3079 NC_009523.1 3869273 3870676 R TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase complement(3869273..3870676) Roseiflexus sp. RS-1 5210047 YP_001277393.1 CDS RoseRS_3080 NC_009523.1 3870694 3871734 R TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; threonine synthase complement(3870694..3871734) Roseiflexus sp. RS-1 5210048 YP_001277394.1 CDS RoseRS_3081 NC_009523.1 3872098 3874011 D hypothetical protein 3872098..3874011 Roseiflexus sp. RS-1 5210049 YP_001277395.1 CDS RoseRS_3082 NC_009523.1 3874087 3875889 D PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; peptidase M61 domain-containing protein 3874087..3875889 Roseiflexus sp. RS-1 5210050 YP_001277396.1 CDS RoseRS_3083 NC_009523.1 3876334 3877725 D PFAM: Amidase; amidase 3876334..3877725 Roseiflexus sp. RS-1 5210051 YP_001277397.1 CDS RoseRS_3084 NC_009523.1 3877729 3878610 D PFAM: protein of unknown function DUF72; hypothetical protein 3877729..3878610 Roseiflexus sp. RS-1 5210052 YP_001277398.1 CDS RoseRS_3085 NC_009523.1 3878859 3879203 D hypothetical protein 3878859..3879203 Roseiflexus sp. RS-1 5210053 YP_001277399.1 CDS RoseRS_3086 NC_009523.1 3879289 3880593 D PFAM: periplasmic binding protein; periplasmic binding protein 3879289..3880593 Roseiflexus sp. RS-1 5210054 YP_001277400.1 CDS RoseRS_3087 NC_009523.1 3880602 3880946 D ferredoxin-like protein 3880602..3880946 Roseiflexus sp. RS-1 5210055 YP_001277401.1 CDS RoseRS_3088 NC_009523.1 3880961 3882076 D PFAM: transport system permease protein; transport system permease 3880961..3882076 Roseiflexus sp. RS-1 5210056 YP_001277402.1 CDS RoseRS_3089 NC_009523.1 3882073 3883095 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3882073..3883095 Roseiflexus sp. RS-1 5210057 YP_001277403.1 CDS RoseRS_3090 NC_009523.1 3883181 3883756 D hypothetical protein 3883181..3883756 Roseiflexus sp. RS-1 5210058 YP_001277404.1 CDS RoseRS_3091 NC_009523.1 3883776 3884612 R PFAM: periplasmic binding protein; periplasmic binding protein complement(3883776..3884612) Roseiflexus sp. RS-1 5210059 YP_001277405.1 CDS RoseRS_3092 NC_009523.1 3884609 3885004 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(3884609..3885004) Roseiflexus sp. RS-1 5210060 YP_001277406.1 CDS RoseRS_3093 NC_009523.1 3885001 3885894 R PFAM: periplasmic binding protein; periplasmic binding protein complement(3885001..3885894) Roseiflexus sp. RS-1 5210061 YP_001277407.1 CDS RoseRS_3094 NC_009523.1 3885962 3886936 D PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein 3885962..3886936 Roseiflexus sp. RS-1 5210062 YP_001277408.1 CDS RoseRS_3095 NC_009523.1 3887095 3887421 D hypothetical protein 3887095..3887421 Roseiflexus sp. RS-1 5210063 YP_001277409.1 CDS RoseRS_3096 NC_009523.1 3887463 3888158 D PFAM: Rhomboid family protein; rhomboid family protein 3887463..3888158 Roseiflexus sp. RS-1 5210064 YP_001277410.1 CDS RoseRS_3097 NC_009523.1 3888174 3889022 D PFAM: protein of unknown function DUF114; hypothetical protein 3888174..3889022 Roseiflexus sp. RS-1 5210065 YP_001277411.1 CDS RoseRS_3098 NC_009523.1 3889011 3890087 R hypothetical protein complement(3889011..3890087) Roseiflexus sp. RS-1 5210066 YP_001277412.1 CDS RoseRS_3099 NC_009523.1 3890113 3893844 R PFAM: CobN/magnesium chelatase; cobaltochelatase complement(3890113..3893844) Roseiflexus sp. RS-1 5210067 YP_001277413.1 CDS RoseRS_3100 NC_009523.1 3893841 3895274 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3893841..3895274) Roseiflexus sp. RS-1 5210068 YP_001277414.1 CDS RoseRS_3101 NC_009523.1 3895259 3895960 R PFAM: cobalt transport protein; cobalt transport protein complement(3895259..3895960) Roseiflexus sp. RS-1 5210069 YP_001277415.1 CDS RoseRS_3102 NC_009523.1 3895976 3896521 R hypothetical protein complement(3895976..3896521) Roseiflexus sp. RS-1 5210070 YP_001277416.1 CDS RoseRS_3103 NC_009523.1 3896555 3897385 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(3896555..3897385) Roseiflexus sp. RS-1 5210071 YP_001277417.1 CDS RoseRS_3104 NC_009523.1 3898040 3898417 R hypothetical protein complement(3898040..3898417) Roseiflexus sp. RS-1 5210072 YP_001277418.1 CDS RoseRS_3105 NC_009523.1 3898453 3899706 R PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; cobalamin synthesis protein, P47K complement(3898453..3899706) Roseiflexus sp. RS-1 5210073 YP_001277419.1 CDS RoseRS_3106 NC_009523.1 3899835 3900338 R PFAM: glutathione peroxidase; glutathione peroxidase complement(3899835..3900338) Roseiflexus sp. RS-1 5210074 YP_001277420.1 CDS RoseRS_3107 NC_009523.1 3900473 3900760 D TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein 3900473..3900760 Roseiflexus sp. RS-1 5210075 YP_001277421.1 CDS RoseRS_3108 NC_009523.1 3900788 3901876 D PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; cobalamin synthesis protein, P47K 3900788..3901876 Roseiflexus sp. RS-1 5210076 YP_001277422.1 CDS RoseRS_3109 NC_009523.1 3902709 3903608 D hypothetical protein 3902709..3903608 Roseiflexus sp. RS-1 5210077 YP_001277423.1 CDS RoseRS_3110 NC_009523.1 3903638 3906364 R PFAM: phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase complement(3903638..3906364) Roseiflexus sp. RS-1 5210078 YP_001277424.1 CDS RoseRS_3111 NC_009523.1 3906395 3907906 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(3906395..3907906) Roseiflexus sp. RS-1 5210079 YP_001277425.1 CDS RoseRS_3112 NC_009523.1 3908109 3910343 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Proprotein convertase, P; hypothetical protein 3908109..3910343 Roseiflexus sp. RS-1 5210080 YP_001277426.1 CDS RoseRS_3113 NC_009523.1 3910455 3911702 D TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cysteine desulfurase 3910455..3911702 Roseiflexus sp. RS-1 5210081 YP_001277427.1 CDS RoseRS_3114 NC_009523.1 3912204 3913253 D PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor 3912204..3913253 Roseiflexus sp. RS-1 5210083 YP_001277428.1 CDS pyrG NC_009523.1 3914222 3915895 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(3914222..3915895) Roseiflexus sp. RS-1 5210084 YP_001277429.1 CDS RoseRS_3116 NC_009523.1 3916134 3916796 R Zn-dependent hydrolase complement(3916134..3916796) Roseiflexus sp. RS-1 5210085 YP_001277430.1 CDS RoseRS_3117 NC_009523.1 3916806 3917495 R PFAM: regulatory protein RecX; regulatory protein RecX complement(3916806..3917495) Roseiflexus sp. RS-1 5210086 YP_001277431.1 CDS recA NC_009523.1 3917502 3918563 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(3917502..3918563) Roseiflexus sp. RS-1 5210087 YP_001277432.1 CDS RoseRS_3119 NC_009523.1 3918777 3919685 R PFAM: peptidase C60, sortase A and B; peptidase C60, sortase A and B complement(3918777..3919685) Roseiflexus sp. RS-1 5210088 YP_001277433.1 CDS RoseRS_3120 NC_009523.1 3919976 3921076 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3919976..3921076) Roseiflexus sp. RS-1 5210089 YP_001277434.1 CDS RoseRS_3121 NC_009523.1 3921081 3922232 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3921081..3922232) Roseiflexus sp. RS-1 5210090 YP_001277435.1 CDS fabZ NC_009523.1 3922366 3922797 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3922366..3922797 Roseiflexus sp. RS-1 5210091 YP_001277436.1 CDS RoseRS_3124 NC_009523.1 3923151 3923498 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3923151..3923498 Roseiflexus sp. RS-1 5210093 YP_001277437.1 CDS RoseRS_3125 NC_009523.1 3923858 3924820 R PFAM: transposase, IS111A/IS1328/IS1533; transposase, IS111A/IS1328/IS1533 complement(3923858..3924820) Roseiflexus sp. RS-1 5210095 YP_001277438.1 CDS RoseRS_3126 NC_009523.1 3925376 3926527 D hypothetical protein 3925376..3926527 Roseiflexus sp. RS-1 5210096 YP_001277439.1 CDS RoseRS_3127 NC_009523.1 3926587 3926913 D hypothetical protein 3926587..3926913 Roseiflexus sp. RS-1 5210097 YP_001277440.1 CDS RoseRS_3128 NC_009523.1 3926923 3927186 D hypothetical protein 3926923..3927186 Roseiflexus sp. RS-1 5210098 YP_001277441.1 CDS RoseRS_3129 NC_009523.1 3929063 3930271 R NACHT family-like NTPase complement(3929063..3930271) Roseiflexus sp. RS-1 5210099 YP_001277442.1 CDS RoseRS_3130 NC_009523.1 3930678 3931904 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(3930678..3931904) Roseiflexus sp. RS-1 5210100 YP_001277443.1 CDS RoseRS_3131 NC_009523.1 3931908 3933107 R PFAM: NB-ARC domain protein; NB-ARC domain-containing protein complement(3931908..3933107) Roseiflexus sp. RS-1 5210101 YP_001277444.1 CDS RoseRS_3132 NC_009523.1 3933317 3933916 D hypothetical protein 3933317..3933916 Roseiflexus sp. RS-1 5210102 YP_001277445.1 CDS RoseRS_3133 NC_009523.1 3934161 3934517 D hypothetical protein 3934161..3934517 Roseiflexus sp. RS-1 5210103 YP_001277446.1 CDS RoseRS_3135 NC_009523.1 3935456 3937576 D hypothetical protein 3935456..3937576 Roseiflexus sp. RS-1 5210105 YP_001277447.1 CDS RoseRS_3136 NC_009523.1 3937605 3940016 D hypothetical protein 3937605..3940016 Roseiflexus sp. RS-1 5210106 YP_001277448.1 CDS RoseRS_3137 NC_009523.1 3940004 3940858 D hypothetical protein 3940004..3940858 Roseiflexus sp. RS-1 5210107 YP_001277449.1 CDS RoseRS_3138 NC_009523.1 3940932 3946538 D hypothetical protein 3940932..3946538 Roseiflexus sp. RS-1 5210108 YP_001277450.1 CDS RoseRS_3139 NC_009523.1 3946531 3948390 D hypothetical protein 3946531..3948390 Roseiflexus sp. RS-1 5210109 YP_001277451.1 CDS RoseRS_3140 NC_009523.1 3948851 3950227 D hypothetical protein 3948851..3950227 Roseiflexus sp. RS-1 5210110 YP_001277452.1 CDS RoseRS_3141 NC_009523.1 3950250 3951827 D hypothetical protein 3950250..3951827 Roseiflexus sp. RS-1 5210111 YP_001277453.1 CDS RoseRS_3142 NC_009523.1 3951936 3953396 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3951936..3953396 Roseiflexus sp. RS-1 5210112 YP_001277454.1 CDS RoseRS_3143 NC_009523.1 3953466 3954083 D PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 3953466..3954083 Roseiflexus sp. RS-1 5210113 YP_001277455.1 CDS RoseRS_3144 NC_009523.1 3954950 3955765 D hypothetical protein 3954950..3955765 Roseiflexus sp. RS-1 5210114 YP_001277456.1 CDS RoseRS_3145 NC_009523.1 3955765 3957372 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 3955765..3957372 Roseiflexus sp. RS-1 5210115 YP_001277457.1 CDS RoseRS_3146 NC_009523.1 3957369 3958484 D PFAM: flavin-containing monooxygenase FMO; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; flavin-containing monooxygenase FMO 3957369..3958484 Roseiflexus sp. RS-1 5210116 YP_001277458.1 CDS RoseRS_3147 NC_009523.1 3959462 3959881 R hypothetical protein complement(3959462..3959881) Roseiflexus sp. RS-1 5210117 YP_001277459.1 CDS RoseRS_3148 NC_009523.1 3959959 3962172 R PFAM: transglutaminase domain protein; transglutaminase domain-containing protein complement(3959959..3962172) Roseiflexus sp. RS-1 5210118 YP_001277460.1 CDS RoseRS_3149 NC_009523.1 3962182 3963465 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(3962182..3963465) Roseiflexus sp. RS-1 5210119 YP_001277461.1 CDS RoseRS_3150 NC_009523.1 3963541 3964365 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3963541..3964365) Roseiflexus sp. RS-1 5210120 YP_001277462.1 CDS RoseRS_3151 NC_009523.1 3964352 3965233 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(3964352..3965233) Roseiflexus sp. RS-1 5210121 YP_001277463.1 CDS RoseRS_3152 NC_009523.1 3965354 3966994 D PFAM: O-antigen polymerase; O-antigen polymerase 3965354..3966994 Roseiflexus sp. RS-1 5210122 YP_001277464.1 CDS RoseRS_3153 NC_009523.1 3967393 3968361 D PFAM: Allergen V5/Tpx-1 family protein; allergen V5/Tpx-1 family protein 3967393..3968361 Roseiflexus sp. RS-1 5210123 YP_001277465.1 CDS RoseRS_3154 NC_009523.1 3969287 3971296 R TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit domain protein; helix-hairpin-helix motif; excinuclease ABC, C subunit domain protein; UvrB/UvrC protein; SMART: Helix-hairpin-helix DNA-binding, class 1; excinuclease ABC subunit C complement(3969287..3971296) Roseiflexus sp. RS-1 5210124 YP_001277466.1 CDS RoseRS_3155 NC_009523.1 3971409 3973088 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 3971409..3973088 Roseiflexus sp. RS-1 5210125 YP_001277467.1 CDS RoseRS_3156 NC_009523.1 3973269 3976451 D hypothetical protein 3973269..3976451 Roseiflexus sp. RS-1 5210126 YP_001277468.1 CDS RoseRS_3157 NC_009523.1 3976596 3977633 R PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor complement(3976596..3977633) Roseiflexus sp. RS-1 5210127 YP_001277469.1 CDS RoseRS_3158 NC_009523.1 3978064 3979314 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein 3978064..3979314 Roseiflexus sp. RS-1 5210128 YP_001277470.1 CDS RoseRS_3159 NC_009523.1 3979552 3979929 R hypothetical protein complement(3979552..3979929) Roseiflexus sp. RS-1 5210129 YP_001277471.1 CDS RoseRS_3160 NC_009523.1 3979935 3981263 R PFAM: protein of unknown function DUF58; hypothetical protein complement(3979935..3981263) Roseiflexus sp. RS-1 5210130 YP_001277472.1 CDS trmE NC_009523.1 3981263 3982678 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3981263..3982678) Roseiflexus sp. RS-1 5210131 YP_001277473.1 CDS RoseRS_3162 NC_009523.1 3982757 3984109 R PFAM: response regulator receiver; response regulator receiver protein complement(3982757..3984109) Roseiflexus sp. RS-1 5210132 YP_001277474.1 CDS RoseRS_3163 NC_009523.1 3984181 3985170 D PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 3984181..3985170 Roseiflexus sp. RS-1 5210133 YP_001277475.1 CDS RoseRS_3164 NC_009523.1 3985176 3985955 R hypothetical protein complement(3985176..3985955) Roseiflexus sp. RS-1 5210134 YP_001277476.1 CDS RoseRS_3165 NC_009523.1 3986176 3987600 R PFAM: PUCC protein; major facilitator superfamily MFS_1; PUCC protein complement(3986176..3987600) Roseiflexus sp. RS-1 5210135 YP_001277477.1 CDS RoseRS_3166 NC_009523.1 3987718 3989166 R PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cyclic nucleotide-binding protein complement(3987718..3989166) Roseiflexus sp. RS-1 5210136 YP_001277478.1 CDS RoseRS_3167 NC_009523.1 3989173 3989769 R hypothetical protein complement(3989173..3989769) Roseiflexus sp. RS-1 5210137 YP_001277479.1 CDS RoseRS_3168 NC_009523.1 3990112 3992151 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3990112..3992151 Roseiflexus sp. RS-1 5210138 YP_001277480.1 CDS RoseRS_3169 NC_009523.1 3992307 3993065 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 3992307..3993065 Roseiflexus sp. RS-1 5210139 YP_001277481.1 CDS RoseRS_3170 NC_009523.1 3993236 3994180 R PFAM: ROK family protein; ROK family protein complement(3993236..3994180) Roseiflexus sp. RS-1 5210141 YP_001277482.1 CDS RoseRS_3171 NC_009523.1 3994171 3994737 R PFAM: sugar isomerase (SIS); sugar isomerase (SIS) complement(3994171..3994737) Roseiflexus sp. RS-1 5210142 YP_001277483.1 CDS RoseRS_3172 NC_009523.1 3994930 3995478 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 3994930..3995478 Roseiflexus sp. RS-1 5210143 YP_001277484.1 CDS RoseRS_3173 NC_009523.1 3995533 3996714 D TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; nucleic acid binding, OB-fold, tRNA/helicase-type; exodeoxyribonuclease VII large subunit 3995533..3996714 Roseiflexus sp. RS-1 5210144 YP_001277485.1 CDS RoseRS_3174 NC_009523.1 3996799 3997032 D TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 3996799..3997032 Roseiflexus sp. RS-1 5210145 YP_001277486.1 CDS RoseRS_3175 NC_009523.1 3997029 3998903 D hypothetical protein 3997029..3998903 Roseiflexus sp. RS-1 5210146 YP_001277487.1 CDS RoseRS_3176 NC_009523.1 3999093 4000025 R PFAM: Auxin Efflux Carrier; auxin efflux carrier complement(3999093..4000025) Roseiflexus sp. RS-1 5210147 YP_001277488.1 CDS RoseRS_3177 NC_009523.1 4000107 4001753 R spermidine synthase-like protein complement(4000107..4001753) Roseiflexus sp. RS-1 5210148 YP_001277489.1 CDS RoseRS_3178 NC_009523.1 4001843 4002100 R PFAM: protein of unknown function YGGT; hypothetical protein complement(4001843..4002100) Roseiflexus sp. RS-1 5210149 YP_001277490.1 CDS RoseRS_3179 NC_009523.1 4002162 4003493 R PFAM: histidinol dehydrogenase; histidinol dehydrogenase complement(4002162..4003493) Roseiflexus sp. RS-1 5210150 YP_001277491.1 CDS RoseRS_3180 NC_009523.1 4003490 4004551 R TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic region; ATP phosphoribosyltransferase complement(4003490..4004551) Roseiflexus sp. RS-1 5210151 YP_001277492.1 CDS RoseRS_3181 NC_009523.1 4004561 4005157 R hypothetical protein complement(4004561..4005157) Roseiflexus sp. RS-1 5210152 YP_001277493.1 CDS RoseRS_3182 NC_009523.1 4005239 4005841 R PFAM: protein of unknown function DUF820; hypothetical protein complement(4005239..4005841) Roseiflexus sp. RS-1 5210153 YP_001277494.1 CDS RoseRS_3183 NC_009523.1 4006010 4007269 R PFAM: protein of unknown function DUF11; protein of unknown function DUF58; hypothetical protein complement(4006010..4007269) Roseiflexus sp. RS-1 5210154 YP_001277495.1 CDS RoseRS_3184 NC_009523.1 4007266 4008222 R PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase complement(4007266..4008222) Roseiflexus sp. RS-1 5210155 YP_001277496.1 CDS RoseRS_3185 NC_009523.1 4008228 4008815 R hypothetical protein complement(4008228..4008815) Roseiflexus sp. RS-1 5210156 YP_001277497.1 CDS RoseRS_3186 NC_009523.1 4008875 4009753 R hypothetical protein complement(4008875..4009753) Roseiflexus sp. RS-1 5210157 YP_001277498.1 CDS RoseRS_3187 NC_009523.1 4009757 4011211 R TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase complement(4009757..4011211) Roseiflexus sp. RS-1 5210158 YP_001277499.1 CDS RoseRS_3188 NC_009523.1 4011419 4013137 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(4011419..4013137) Roseiflexus sp. RS-1 5210159 YP_001277500.1 CDS RoseRS_3189 NC_009523.1 4013187 4014143 D PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; HhH-GPD family protein 4013187..4014143 Roseiflexus sp. RS-1 5210160 YP_001277501.1 CDS RoseRS_3190 NC_009523.1 4014235 4015269 D PFAM: histone deacetylase superfamily; histone deacetylase superfamily protein 4014235..4015269 Roseiflexus sp. RS-1 5210161 YP_001277502.1 CDS hisH NC_009523.1 4015288 4015911 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 4015288..4015911 Roseiflexus sp. RS-1 5210162 YP_001277503.1 CDS RoseRS_3192 NC_009523.1 4015911 4016624 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 4015911..4016624 Roseiflexus sp. RS-1 5210163 YP_001277504.1 CDS RoseRS_3193 NC_009523.1 4016635 4017747 D hypothetical protein 4016635..4017747 Roseiflexus sp. RS-1 5210164 YP_001277505.1 CDS RoseRS_3194 NC_009523.1 4017773 4018549 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 4017773..4018549 Roseiflexus sp. RS-1 5210165 YP_001277506.1 CDS RoseRS_3195 NC_009523.1 4020793 4021509 D TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; molybdopterin converting factor subunit 1 4020793..4021509 Roseiflexus sp. RS-1 5210166 YP_001277507.1 CDS RoseRS_3196 NC_009523.1 4021491 4023050 R hypothetical protein complement(4021491..4023050) Roseiflexus sp. RS-1 5210167 YP_001277508.1 CDS RoseRS_3197 NC_009523.1 4023094 4024533 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein complement(4023094..4024533) Roseiflexus sp. RS-1 5210168 YP_001277509.1 CDS RoseRS_3198 NC_009523.1 4024692 4024991 R hypothetical protein complement(4024692..4024991) Roseiflexus sp. RS-1 5210169 YP_001277510.1 CDS RoseRS_3199 NC_009523.1 4025016 4025918 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 4025016..4025918 Roseiflexus sp. RS-1 5210170 YP_001277511.1 CDS RoseRS_3200 NC_009523.1 4025943 4026779 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase, alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 4025943..4026779 Roseiflexus sp. RS-1 5210171 YP_001277512.1 CDS RoseRS_3201 NC_009523.1 4027045 4030743 D PFAM: short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; short-chain dehydrogenase/reductase SDR 4027045..4030743 Roseiflexus sp. RS-1 5210172 YP_001277513.1 CDS RoseRS_3202 NC_009523.1 4030781 4036519 D PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein; AMP-dependent synthetase and ligase 4030781..4036519 Roseiflexus sp. RS-1 5210173 YP_001277514.1 CDS RoseRS_3203 NC_009523.1 4036783 4038147 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; acetyl-CoA carboxylase, biotin carboxylase 4036783..4038147 Roseiflexus sp. RS-1 5210174 YP_001277515.1 CDS RoseRS_3204 NC_009523.1 4038224 4039771 D PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 4038224..4039771 Roseiflexus sp. RS-1 5210175 YP_001277516.1 CDS RoseRS_3205 NC_009523.1 4039794 4040789 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 4039794..4040789 Roseiflexus sp. RS-1 5210176 YP_001277517.1 CDS RoseRS_3206 NC_009523.1 4040889 4042928 D hypothetical protein 4040889..4042928 Roseiflexus sp. RS-1 5210177 YP_001277518.1 CDS RoseRS_3207 NC_009523.1 4042932 4045010 R PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; peptidase S41 complement(4042932..4045010) Roseiflexus sp. RS-1 5210178 YP_001277519.1 CDS RoseRS_3208 NC_009523.1 4045222 4046205 R multi-copper enzyme maturation ABC transporter permease-like protein complement(4045222..4046205) Roseiflexus sp. RS-1 5210179 YP_001277520.1 CDS RoseRS_3209 NC_009523.1 4046189 4047202 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4046189..4047202) Roseiflexus sp. RS-1 5210180 YP_001277521.1 CDS RoseRS_3210 NC_009523.1 4047272 4048453 R PFAM: protein of unknown function DUF11; hypothetical protein complement(4047272..4048453) Roseiflexus sp. RS-1 5210181 YP_001277522.1 CDS RoseRS_3211 NC_009523.1 4048685 4049320 R hypothetical protein complement(4048685..4049320) Roseiflexus sp. RS-1 5210182 YP_001277523.1 CDS RoseRS_3212 NC_009523.1 4049790 4050956 D PFAM: cyclic nucleotide-binding; ABC transporter related; SMART: AAA ATPase; cyclic nucleotide-binding protein 4049790..4050956 Roseiflexus sp. RS-1 5210183 YP_001277524.1 CDS RoseRS_3213 NC_009523.1 4050997 4052505 D multidrug resistance efflux pump-like protein 4050997..4052505 Roseiflexus sp. RS-1 5210184 YP_001277525.1 CDS RoseRS_3214 NC_009523.1 4052703 4053116 D PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 4052703..4053116 Roseiflexus sp. RS-1 5210186 YP_001277526.1 CDS RoseRS_3215 NC_009523.1 4053128 4054390 D hypothetical protein 4053128..4054390 Roseiflexus sp. RS-1 5210187 YP_001277527.1 CDS RoseRS_3216 NC_009523.1 4054409 4055071 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 4054409..4055071 Roseiflexus sp. RS-1 5210188 YP_001277528.1 CDS RoseRS_3217 NC_009523.1 4055205 4055693 D hypothetical protein 4055205..4055693 Roseiflexus sp. RS-1 5210189 YP_001277529.1 CDS RoseRS_3218 NC_009523.1 4056281 4056997 D hypothetical protein 4056281..4056997 Roseiflexus sp. RS-1 5210193 YP_001277530.1 CDS RoseRS_3219 NC_009523.1 4057053 4057502 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(4057053..4057502) Roseiflexus sp. RS-1 5210194 YP_001277531.1 CDS RoseRS_3220 NC_009523.1 4057519 4058073 R PFAM: Inorganic pyrophosphatase; inorganic diphosphatase complement(4057519..4058073) Roseiflexus sp. RS-1 5210195 YP_001277532.1 CDS RoseRS_3221 NC_009523.1 4058250 4059059 R PFAM: protein of unknown function DUF124; hypothetical protein complement(4058250..4059059) Roseiflexus sp. RS-1 5210196 YP_001277533.1 CDS rho NC_009523.1 4059452 4060786 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(4059452..4060786) Roseiflexus sp. RS-1 5210197 YP_001277534.1 CDS alaS NC_009523.1 4061299 4064094 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 4061299..4064094 Roseiflexus sp. RS-1 5210198 YP_001277535.1 CDS RoseRS_3224 NC_009523.1 4064113 4066110 D hypothetical protein 4064113..4066110 Roseiflexus sp. RS-1 5210199 YP_001277536.1 CDS RoseRS_3225 NC_009523.1 4066129 4066554 D PFAM: Holliday junction resolvase YqgF; SMART: Resolvase, RNase H domain protein fold; Holliday junction resolvase YqgF 4066129..4066554 Roseiflexus sp. RS-1 5210200 YP_001277537.1 CDS RoseRS_3226 NC_009523.1 4066557 4067105 R hypothetical protein complement(4066557..4067105) Roseiflexus sp. RS-1 5210201 YP_001277538.1 CDS RoseRS_3227 NC_009523.1 4067578 4068459 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase complement(4067578..4068459) Roseiflexus sp. RS-1 5210202 YP_001277539.1 CDS RoseRS_3228 NC_009523.1 4068499 4069455 R PFAM: peptidase S58, DmpA; peptidase S58, DmpA complement(4068499..4069455) Roseiflexus sp. RS-1 5210203 YP_001277540.1 CDS RoseRS_3229 NC_009523.1 4069452 4070261 R PFAM: DSBA oxidoreductase; DSBA oxidoreductase complement(4069452..4070261) Roseiflexus sp. RS-1 5210204 YP_001277541.1 CDS RoseRS_3230 NC_009523.1 4070251 4070760 R hypothetical protein complement(4070251..4070760) Roseiflexus sp. RS-1 5210205 YP_001277542.1 CDS RoseRS_3231 NC_009523.1 4070828 4071166 R PFAM: protein of unknown function DUF970; hypothetical protein complement(4070828..4071166) Roseiflexus sp. RS-1 5210206 YP_001277543.1 CDS RoseRS_3232 NC_009523.1 4071184 4071864 R PFAM: thymidylate kinase; dTMP kinase complement(4071184..4071864) Roseiflexus sp. RS-1 5210207 YP_001277544.1 CDS RoseRS_3233 NC_009523.1 4071891 4073507 R PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: AAA ATPase; single-stranded nucleic acid binding R3H domain-containing protein complement(4071891..4073507) Roseiflexus sp. RS-1 5210208 YP_001277545.1 CDS RoseRS_3234 NC_009523.1 4073428 4074498 R hypothetical protein complement(4073428..4074498) Roseiflexus sp. RS-1 5210209 YP_001277546.1 CDS RoseRS_3235 NC_009523.1 4074528 4075097 R PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; SNO glutamine amidotransferase complement(4074528..4075097) Roseiflexus sp. RS-1 5210210 YP_001277547.1 CDS RoseRS_3236 NC_009523.1 4075120 4076001 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(4075120..4076001) Roseiflexus sp. RS-1 5210211 YP_001277548.1 CDS RoseRS_3237 NC_009523.1 4076175 4076780 R PFAM: manganese and iron superoxide dismutase; superoxide dismutase complement(4076175..4076780) Roseiflexus sp. RS-1 5210212 YP_001277549.1 CDS RoseRS_3238 NC_009523.1 4076830 4077465 R PFAM: regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; putative transcriptional regulator complement(4076830..4077465) Roseiflexus sp. RS-1 5210213 YP_001277550.1 CDS RoseRS_3239 NC_009523.1 4077656 4078432 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 4077656..4078432 Roseiflexus sp. RS-1 5210214 YP_001277551.1 CDS RoseRS_3240 NC_009523.1 4078445 4079611 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; class I/II aminotransferase 4078445..4079611 Roseiflexus sp. RS-1 5210215 YP_001277552.1 CDS RoseRS_3241 NC_009523.1 4079629 4079979 D hypothetical protein 4079629..4079979 Roseiflexus sp. RS-1 5210216 YP_001277553.1 CDS RoseRS_3242 NC_009523.1 4079986 4080669 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4079986..4080669 Roseiflexus sp. RS-1 5210217 YP_001277554.1 CDS RoseRS_3243 NC_009523.1 4080666 4081100 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(4080666..4081100) Roseiflexus sp. RS-1 5210218 YP_001277555.1 CDS RoseRS_3244 NC_009523.1 4081097 4086586 R SMART: Parallel beta-helix repeat; parallel beta-helix repeat-containing protein complement(4081097..4086586) Roseiflexus sp. RS-1 5210219 YP_001277556.1 CDS RoseRS_3245 NC_009523.1 4086588 4090907 R hypothetical protein complement(4086588..4090907) Roseiflexus sp. RS-1 5210220 YP_001277557.1 CDS RoseRS_3246 NC_009523.1 4091164 4093038 D TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 4091164..4093038 Roseiflexus sp. RS-1 5210221 YP_001277558.1 CDS RoseRS_3247 NC_009523.1 4093658 4094134 D PFAM: Colicin V production protein; colicin V production protein 4093658..4094134 Roseiflexus sp. RS-1 5210222 YP_001277559.1 CDS RoseRS_3248 NC_009523.1 4094426 4094803 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 4094426..4094803 Roseiflexus sp. RS-1 5210223 YP_001277560.1 CDS RoseRS_3249 NC_009523.1 4094818 4095006 D hypothetical protein 4094818..4095006 Roseiflexus sp. RS-1 5210224 YP_001277561.1 CDS RoseRS_3250 NC_009523.1 4095511 4096383 R TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha complement(4095511..4096383) Roseiflexus sp. RS-1 5210225 YP_001277562.1 CDS RoseRS_3251 NC_009523.1 4096460 4097194 R PFAM: alanine racemase domain protein; alanine racemase domain-containing protein complement(4096460..4097194) Roseiflexus sp. RS-1 5210226 YP_001277563.1 CDS RoseRS_3252 NC_009523.1 4097255 4097761 D PFAM: low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 4097255..4097761 Roseiflexus sp. RS-1 5210227 YP_001277564.1 CDS RoseRS_3253 NC_009523.1 4097779 4102257 R hypothetical protein complement(4097779..4102257) Roseiflexus sp. RS-1 5210228 YP_001277565.1 CDS RoseRS_3254 NC_009523.1 4103395 4104768 R PFAM: peptidase C14, caspase catalytic subunit p20; peptidase C14, caspase catalytic subunit p20 complement(4103395..4104768) Roseiflexus sp. RS-1 5210229 YP_001277566.1 CDS RoseRS_3255 NC_009523.1 4105001 4105963 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(4105001..4105963) Roseiflexus sp. RS-1 5210230 YP_001277567.1 CDS RoseRS_3256 NC_009523.1 4106545 4108026 R TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase, component 1; protein of unknown function DUF1197; chlorophyllide reductase subunit Z complement(4106545..4108026) Roseiflexus sp. RS-1 5210231 YP_001277568.1 CDS RoseRS_3257 NC_009523.1 4108032 4109300 R TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase, component 1; chlorophyllide reductase subunit Y complement(4108032..4109300) Roseiflexus sp. RS-1 5210232 YP_001277569.1 CDS RoseRS_3258 NC_009523.1 4109758 4109949 R hypothetical protein complement(4109758..4109949) Roseiflexus sp. RS-1 5210233 YP_001277570.1 CDS RoseRS_3259 NC_009523.1 4110022 4110768 R PFAM: protein of unknown function DUF169; hypothetical protein complement(4110022..4110768) Roseiflexus sp. RS-1 5210234 YP_001277571.1 CDS RoseRS_3260 NC_009523.1 4110880 4112058 R TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X complement(4110880..4112058) Roseiflexus sp. RS-1 5210235 YP_001277572.1 CDS RoseRS_3261 NC_009523.1 4112197 4113180 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(4112197..4113180) Roseiflexus sp. RS-1 5210236 YP_001277573.1 CDS RoseRS_3262 NC_009523.1 4113180 4113665 R PFAM: 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD complement(4113180..4113665) Roseiflexus sp. RS-1 5210237 YP_001277574.1 CDS RoseRS_3263 NC_009523.1 4113962 4114807 D PFAM: UspA domain protein; UspA domain-containing protein 4113962..4114807 Roseiflexus sp. RS-1 5210238 YP_001277575.1 CDS RoseRS_3264 NC_009523.1 4114860 4115630 R hypothetical protein complement(4114860..4115630) Roseiflexus sp. RS-1 5210239 YP_001277576.1 CDS RoseRS_3265 NC_009523.1 4115657 4116877 R TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; geranylgeranyl reductase complement(4115657..4116877) Roseiflexus sp. RS-1 5210240 YP_001277577.1 CDS RoseRS_3266 NC_009523.1 4117014 4117928 R TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; bacteriochlorophyll/chlorophyll a synthase complement(4117014..4117928) Roseiflexus sp. RS-1 5210241 YP_001277578.1 CDS RoseRS_3267 NC_009523.1 4118066 4119028 R hypothetical protein complement(4118066..4119028) Roseiflexus sp. RS-1 5210242 YP_001277579.1 CDS RoseRS_3268 NC_009523.1 4119127 4121058 R TIGRFAM: photosynthetic reaction center, M subunit; photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; bifunctional photosynthetic reaction center subunit L/M complement(4119127..4121058) Roseiflexus sp. RS-1 5210243 YP_001277580.1 CDS RoseRS_3269 NC_009523.1 4121238 4121360 R hypothetical protein complement(4121238..4121360) Roseiflexus sp. RS-1 5210244 YP_001277581.1 CDS RoseRS_3270 NC_009523.1 4121382 4121552 R PFAM: antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta complement(4121382..4121552) Roseiflexus sp. RS-1 5210245 YP_001277582.1 CDS RoseRS_3271 NC_009523.1 4122063 4123070 D PFAM: regulatory protein, MerR; MerR family transcriptional regulator 4122063..4123070 Roseiflexus sp. RS-1 5210246 YP_001277583.1 CDS RoseRS_3272 NC_009523.1 4123177 4123620 D hypothetical protein 4123177..4123620 Roseiflexus sp. RS-1 5210247 YP_001277584.1 CDS RoseRS_3273 NC_009523.1 4123655 4124605 R PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; transglutaminase domain-containing protein complement(4123655..4124605) Roseiflexus sp. RS-1 5210248 YP_001277585.1 CDS RoseRS_3274 NC_009523.1 4124721 4125778 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(4124721..4125248,4125248..4125778)) Roseiflexus sp. RS-1 5210249 YP_001277586.1 CDS RoseRS_3275 NC_009523.1 4126413 4127387 R PFAM: protein of unknown function DUF403; hypothetical protein complement(4126413..4127387) Roseiflexus sp. RS-1 5210250 YP_001277587.1 CDS RoseRS_3276 NC_009523.1 4127380 4128810 R PFAM: protein of unknown function DUF404; protein of unknown function DUF407; hypothetical protein complement(4127380..4128810) Roseiflexus sp. RS-1 5210251 YP_001277588.1 CDS RoseRS_3277 NC_009523.1 4128877 4130094 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase 4128877..4130094 Roseiflexus sp. RS-1 5210252 YP_001277589.1 CDS RoseRS_3278 NC_009523.1 4130091 4130735 D PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator 4130091..4130735 Roseiflexus sp. RS-1 5210253 YP_001277590.1 CDS RoseRS_3279 NC_009523.1 4130944 4131771 D hypothetical protein 4130944..4131771 Roseiflexus sp. RS-1 5210254 YP_001277591.1 CDS RoseRS_3280 NC_009523.1 4131879 4132796 D TIGRFAM: ribokinase; PFAM: PfkB domain protein; ribokinase 4131879..4132796 Roseiflexus sp. RS-1 5210255 YP_001277592.1 CDS RoseRS_3281 NC_009523.1 4132793 4133458 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 4132793..4133458 Roseiflexus sp. RS-1 5210256 YP_001277593.1 CDS RoseRS_3282 NC_009523.1 4133673 4134047 D PFAM: LrgA family protein; LrgA family protein 4133673..4134047 Roseiflexus sp. RS-1 5210257 YP_001277594.1 CDS RoseRS_3283 NC_009523.1 4134028 4134750 D PFAM: LrgB family protein; LrgB family protein 4134028..4134750 Roseiflexus sp. RS-1 5210258 YP_001277595.1 CDS RoseRS_3284 NC_009523.1 4134848 4135594 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 4134848..4135594 Roseiflexus sp. RS-1 5210259 YP_001277596.1 CDS RoseRS_3285 NC_009523.1 4135616 4136176 D PFAM: conserved hypothetical protein 730; hypothetical protein 4135616..4136176 Roseiflexus sp. RS-1 5210260 YP_001277597.1 CDS RoseRS_3286 NC_009523.1 4136192 4137547 D PFAM: protein of unknown function DUF58; hypothetical protein 4136192..4137547 Roseiflexus sp. RS-1 5210261 YP_001277598.1 CDS RoseRS_3287 NC_009523.1 4137551 4137910 R hypothetical protein complement(4137551..4137910) Roseiflexus sp. RS-1 5210262 YP_001277599.1 CDS RoseRS_3288 NC_009523.1 4137923 4138285 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(4137923..4138285) Roseiflexus sp. RS-1 5210263 YP_001277600.1 CDS RoseRS_3289 NC_009523.1 4138365 4138808 R PFAM: ATP-binding region, ATPase domain protein domain protein; putative anti-sigma regulatory factor complement(4138365..4138808) Roseiflexus sp. RS-1 5210264 YP_001277601.1 CDS RoseRS_3290 NC_009523.1 4138811 4139293 R PFAM: ATP-binding region, ATPase domain protein domain protein; putative anti-sigma regulatory factor complement(4138811..4139293) Roseiflexus sp. RS-1 5210265 YP_001277602.1 CDS RoseRS_3291 NC_009523.1 4139662 4141212 R PFAM: carboxyl transferase; carboxyl transferase complement(4139662..4141212) Roseiflexus sp. RS-1 5210266 YP_001277603.1 CDS RoseRS_3292 NC_009523.1 4141511 4141852 D hypothetical protein 4141511..4141852 Roseiflexus sp. RS-1 5210267 YP_001277604.1 CDS RoseRS_3293 NC_009523.1 4141859 4142371 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4141859..4142371) Roseiflexus sp. RS-1 5210268 YP_001277605.1 CDS RoseRS_3294 NC_009523.1 4142473 4142802 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin 4142473..4142802 Roseiflexus sp. RS-1 5210269 YP_001277606.1 CDS RoseRS_3295 NC_009523.1 4142820 4143104 D PFAM: protein of unknown function DUF156; hypothetical protein 4142820..4143104 Roseiflexus sp. RS-1 5210270 YP_001277607.1 CDS RoseRS_3296 NC_009523.1 4143105 4143344 R hypothetical protein complement(4143105..4143344) Roseiflexus sp. RS-1 5210271 YP_001277608.1 CDS RoseRS_3297 NC_009523.1 4143672 4144664 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 4143672..4144664 Roseiflexus sp. RS-1 5210272 YP_001277609.1 CDS RoseRS_3298 NC_009523.1 4144751 4145416 D TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; dihydroxyacetone kinase subunit L 4144751..4145416 Roseiflexus sp. RS-1 5210273 YP_001277610.1 CDS RoseRS_3299 NC_009523.1 4145438 4147117 D PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; FAD dependent oxidoreductase 4145438..4147117 Roseiflexus sp. RS-1 5210274 YP_001277611.1 CDS RoseRS_3300 NC_009523.1 4147133 4148377 D sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 4147133..4148377 Roseiflexus sp. RS-1 5210275 YP_001277612.1 CDS glpC NC_009523.1 4148374 4149621 D anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 4148374..4149621 Roseiflexus sp. RS-1 5210276 YP_001277613.1 CDS RoseRS_3302 NC_009523.1 4149625 4150032 D PFAM: PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 4149625..4150032 Roseiflexus sp. RS-1 5210277 YP_001277614.1 CDS RoseRS_3303 NC_009523.1 4150039 4150356 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; phosphotransferase system, phosphocarrier protein HPr 4150039..4150356 Roseiflexus sp. RS-1 5210278 YP_001277615.1 CDS RoseRS_3304 NC_009523.1 4150357 4152027 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; phosphoenolpyruvate-protein phosphotransferase 4150357..4152027 Roseiflexus sp. RS-1 5210279 YP_001277616.1 CDS RoseRS_3305 NC_009523.1 4152024 4154096 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 4152024..4154096 Roseiflexus sp. RS-1 5210280 YP_001277617.1 CDS RoseRS_3306 NC_009523.1 4154115 4156202 D hypothetical protein 4154115..4156202 Roseiflexus sp. RS-1 5210281 YP_001277618.1 CDS RoseRS_3307 NC_009523.1 4156524 4156670 R transcriptional modulator of MazE/toxin MazF complement(4156524..4156670) Roseiflexus sp. RS-1 5210282 YP_001277619.1 CDS RoseRS_3308 NC_009523.1 4156674 4156916 R PFAM: SpoVT/AbrB domain protein; transcriptional regulator/antitoxin MazE complement(4156674..4156916) Roseiflexus sp. RS-1 5210283 YP_001277620.1 CDS RoseRS_3309 NC_009523.1 4157320 4158282 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 4157320..4158282 Roseiflexus sp. RS-1 5210284 YP_001277621.1 CDS RoseRS_3310 NC_009523.1 4158451 4160178 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase complement(4158451..4160178) Roseiflexus sp. RS-1 5210285 YP_001277622.1 CDS RoseRS_3311 NC_009523.1 4160209 4160769 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(4160209..4160769) Roseiflexus sp. RS-1 5210286 YP_001277623.1 CDS RoseRS_3312 NC_009523.1 4161043 4162380 D hypothetical protein 4161043..4162380 Roseiflexus sp. RS-1 5210287 YP_001277624.1 CDS RoseRS_3313 NC_009523.1 4163004 4164017 R hypothetical protein complement(4163004..4164017) Roseiflexus sp. RS-1 5210288 YP_001277625.1 CDS RoseRS_3314 NC_009523.1 4164104 4164601 D hypothetical protein 4164104..4164601 Roseiflexus sp. RS-1 5210289 YP_001277626.1 CDS RoseRS_3315 NC_009523.1 4164652 4165128 R hypothetical protein complement(4164652..4165128) Roseiflexus sp. RS-1 5210290 YP_001277627.1 CDS RoseRS_3316 NC_009523.1 4165255 4166043 D PFAM: inositol monophosphatase; inositol monophosphatase 4165255..4166043 Roseiflexus sp. RS-1 5210291 YP_001277628.1 CDS RoseRS_3317 NC_009523.1 4166054 4167121 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4166054..4167121 Roseiflexus sp. RS-1 5210292 YP_001277629.1 CDS RoseRS_3318 NC_009523.1 4167160 4167378 D hypothetical protein 4167160..4167378 Roseiflexus sp. RS-1 5210293 YP_001277630.1 CDS RoseRS_3319 NC_009523.1 4167424 4168656 D TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; threonine dehydratase 4167424..4168656 Roseiflexus sp. RS-1 5210294 YP_001277631.1 CDS RoseRS_3320 NC_009523.1 4168675 4168896 D hypothetical protein 4168675..4168896 Roseiflexus sp. RS-1 5210295 YP_001277632.1 CDS RoseRS_3321 NC_009523.1 4168989 4169207 D hypothetical protein 4168989..4169207 Roseiflexus sp. RS-1 5210296 YP_001277633.1 CDS RoseRS_3322 NC_009523.1 4169284 4172898 R PFAM: HEAT domain containing protein; transcriptional regulator domain protein; transcriptional activator domain; Tetratricopeptide TPR_4; transcriptional activator domain-containing protein complement(4169284..4172898) Roseiflexus sp. RS-1 5210297 YP_001277634.1 CDS RoseRS_3323 NC_009523.1 4173332 4174537 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4173332..4174537 Roseiflexus sp. RS-1 5210300 YP_001277635.1 CDS RoseRS_3324 NC_009523.1 4174634 4174888 D TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; preprotein translocase subunit SecE 4174634..4174888 Roseiflexus sp. RS-1 5210301 YP_001277636.1 CDS RoseRS_3325 NC_009523.1 4174912 4175496 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor 4174912..4175496 Roseiflexus sp. RS-1 5210302 YP_001277637.1 CDS rplK NC_009523.1 4175522 4175947 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 4175522..4175947 Roseiflexus sp. RS-1 5210303 YP_001277638.1 CDS rplA NC_009523.1 4176001 4176723 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 4176001..4176723 Roseiflexus sp. RS-1 5210304 YP_001277639.1 CDS rplJ NC_009523.1 4176955 4177515 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4176955..4177515 Roseiflexus sp. RS-1 5210305 YP_001277640.1 CDS rplL NC_009523.1 4177598 4178020 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 4177598..4178020 Roseiflexus sp. RS-1 5210306 YP_001277641.1 CDS RoseRS_3330 NC_009523.1 4178077 4178205 R hypothetical protein complement(4178077..4178205) Roseiflexus sp. RS-1 5210307 YP_001277642.1 CDS RoseRS_3331 NC_009523.1 4178384 4179589 R TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; cysteinyl-tRNA synthetase complement(4178384..4179589) Roseiflexus sp. RS-1 5210308 YP_001277643.1 CDS RoseRS_3332 NC_009523.1 4179731 4180843 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4179731..4180843 Roseiflexus sp. RS-1 5210309 YP_001277644.1 CDS RoseRS_3333 NC_009523.1 4180855 4182075 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 4180855..4182075 Roseiflexus sp. RS-1 5210310 YP_001277645.1 CDS miaA NC_009523.1 4182655 4183572 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(4182655..4183572) Roseiflexus sp. RS-1 5210311 YP_001277646.1 CDS RoseRS_3335 NC_009523.1 4183641 4184543 R PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein complement(4183641..4184543) Roseiflexus sp. RS-1 5210312 YP_001277647.1 CDS RoseRS_3336 NC_009523.1 4184642 4186378 R in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase complement(4184642..4186378) Roseiflexus sp. RS-1 5210313 YP_001277648.1 CDS RoseRS_3337 NC_009523.1 4186392 4187798 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(4186392..4187798) Roseiflexus sp. RS-1 5210314 YP_001277649.1 CDS RoseRS_3338 NC_009523.1 4187811 4187996 R hypothetical protein complement(4187811..4187996) Roseiflexus sp. RS-1 5210315 YP_001277650.1 CDS RoseRS_3339 NC_009523.1 4188053 4188883 R PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(4188053..4188883) Roseiflexus sp. RS-1 5210316 YP_001277651.1 CDS RoseRS_3340 NC_009523.1 4188887 4190509 R PFAM: sulfatase; sulfatase complement(4188887..4190509) Roseiflexus sp. RS-1 5210317 YP_001277652.1 CDS RoseRS_3341 NC_009523.1 4190627 4192081 D PFAM: fumarate lyase; fumarate lyase 4190627..4192081 Roseiflexus sp. RS-1 5210318 YP_001277653.1 CDS RoseRS_3342 NC_009523.1 4192159 4193265 D chromosome partitioning ATPase 4192159..4193265 Roseiflexus sp. RS-1 5210319 YP_001277654.1 CDS RoseRS_3343 NC_009523.1 4193279 4194004 R PFAM: LIM, zinc-binding protein; LIM protein complement(4193279..4194004) Roseiflexus sp. RS-1 5210320 YP_001277655.1 CDS RoseRS_3344 NC_009523.1 4194207 4194992 D PFAM: Silent information regulator protein Sir2; silent information regulator protein Sir2 4194207..4194992 Roseiflexus sp. RS-1 5210321 YP_001277656.1 CDS RoseRS_3345 NC_009523.1 4195161 4196114 D TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 2 4195161..4196114 Roseiflexus sp. RS-1 5210322 YP_001277657.1 CDS RoseRS_3346 NC_009523.1 4196184 4197362 R hypothetical protein complement(4196184..4197362) Roseiflexus sp. RS-1 5210323 YP_001277658.1 CDS RoseRS_3347 NC_009523.1 4197359 4197781 R PFAM: TadE family protein; TadE family protein complement(4197359..4197781) Roseiflexus sp. RS-1 5210324 YP_001277659.1 CDS RoseRS_3348 NC_009523.1 4198061 4199770 R PFAM: TadE family protein; TadE family protein complement(4198061..4199770) Roseiflexus sp. RS-1 5210325 YP_001277660.1 CDS RoseRS_3349 NC_009523.1 4199767 4201056 R PFAM: von Willebrand factor, type A; von Willebrand factor, type A complement(4199767..4201056) Roseiflexus sp. RS-1 5210326 YP_001277661.1 CDS RoseRS_3350 NC_009523.1 4201053 4201982 R PFAM: type II secretion system protein; type II secretion system protein complement(4201053..4201982) Roseiflexus sp. RS-1 5210327 YP_001277662.1 CDS RoseRS_3351 NC_009523.1 4201982 4202989 R PFAM: type II secretion system protein; type II secretion system protein complement(4201982..4202989) Roseiflexus sp. RS-1 5210328 YP_001277663.1 CDS RoseRS_3352 NC_009523.1 4202967 4204382 R PFAM: type II secretion system protein E; type II secretion system protein E complement(4202967..4204382) Roseiflexus sp. RS-1 5210329 YP_001277664.1 CDS RoseRS_3353 NC_009523.1 4204397 4205656 R PFAM: response regulator receiver; response regulator receiver protein complement(4204397..4205656) Roseiflexus sp. RS-1 5210330 YP_001277665.1 CDS RoseRS_3354 NC_009523.1 4205694 4206476 R PFAM: SAF domain; SAF domain-containing protein complement(4205694..4206476) Roseiflexus sp. RS-1 5210331 YP_001277666.1 CDS RoseRS_3355 NC_009523.1 4207010 4207378 R PFAM: response regulator receiver; two component Fis family transcriptional regulator complement(4207010..4207378) Roseiflexus sp. RS-1 5210332 YP_001277667.1 CDS RoseRS_3356 NC_009523.1 4207569 4208774 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS/PAC sensor signal transduction histidine kinase 4207569..4208774 Roseiflexus sp. RS-1 5210333 YP_001277668.1 CDS RoseRS_3357 NC_009523.1 4208810 4209661 D PFAM: response regulator receiver; response regulator receiver protein 4208810..4209661 Roseiflexus sp. RS-1 5210334 YP_001277669.1 CDS RoseRS_3358 NC_009523.1 4209896 4210201 D PFAM: KaiB domain protein; KaiB domain-containing protein 4209896..4210201 Roseiflexus sp. RS-1 5210335 YP_001277670.1 CDS RoseRS_3359 NC_009523.1 4210198 4211730 D acts as a promotor non-specific transcription repressor; circadian clock protein KaiC 4210198..4211730 Roseiflexus sp. RS-1 5210336 YP_001277671.1 CDS RoseRS_3360 NC_009523.1 4211807 4213288 D PFAM: FAD linked oxidase domain protein; D-lactate dehydrogenase 4211807..4213288 Roseiflexus sp. RS-1 5210337 YP_001277672.1 CDS RoseRS_3362 NC_009523.1 4213866 4215149 D PFAM: FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 4213866..4215149 Roseiflexus sp. RS-1 5210339 YP_001277673.1 CDS RoseRS_3363 NC_009523.1 4215198 4215902 D PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 4215198..4215902 Roseiflexus sp. RS-1 5210340 YP_001277674.1 CDS RoseRS_3364 NC_009523.1 4215904 4216464 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(4215904..4216464) Roseiflexus sp. RS-1 5210341 YP_001277675.1 CDS RoseRS_3365 NC_009523.1 4217063 4218922 D PFAM: polysaccharide deacetylase; polysaccharide deacetylase 4217063..4218922 Roseiflexus sp. RS-1 5210342 YP_001277676.1 CDS RoseRS_3366 NC_009523.1 4218910 4220532 D hypothetical protein 4218910..4220532 Roseiflexus sp. RS-1 5210343 YP_001277677.1 CDS RoseRS_3367 NC_009523.1 4220651 4222465 D PFAM: ABC-2 type transporter; ABC-2 type transporter 4220651..4222465 Roseiflexus sp. RS-1 5210344 YP_001277678.1 CDS RoseRS_3368 NC_009523.1 4222696 4224735 D PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; glycosyl transferase family protein 4222696..4224735 Roseiflexus sp. RS-1 5210345 YP_001277679.1 CDS RoseRS_3369 NC_009523.1 4224735 4225988 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4224735..4225988 Roseiflexus sp. RS-1 5210346 YP_001277680.1 CDS RoseRS_3370 NC_009523.1 4225985 4226593 D hypothetical protein 4225985..4226593 Roseiflexus sp. RS-1 5210347 YP_001277681.1 CDS RoseRS_3371 NC_009523.1 4226748 4228697 D TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase, HD region; putative PAS/PAC sensor protein 4226748..4228697 Roseiflexus sp. RS-1 5210348 YP_001277682.1 CDS RoseRS_3372 NC_009523.1 4228714 4229070 R hypothetical protein complement(4228714..4229070) Roseiflexus sp. RS-1 5210349 YP_001277683.1 CDS RoseRS_3373 NC_009523.1 4229415 4230455 R PFAM: fatty acid desaturase; fatty acid desaturase complement(4229415..4230455) Roseiflexus sp. RS-1 5210350 YP_001277684.1 CDS RoseRS_3374 NC_009523.1 4230575 4230901 R hypothetical protein complement(4230575..4230901) Roseiflexus sp. RS-1 5210351 YP_001277685.1 CDS RoseRS_3375 NC_009523.1 4231260 4233620 D PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 4231260..4233620 Roseiflexus sp. RS-1 5210352 YP_001277686.1 CDS RoseRS_3376 NC_009523.1 4233671 4236523 D PFAM: Leucine zipper, homeobox-associated domain protein; leucine zipper homeobox-associated domain-containing protein 4233671..4236523 Roseiflexus sp. RS-1 5210353 YP_001277687.1 CDS RoseRS_3377 NC_009523.1 4236520 4237329 D PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; protein phosphatase 2C domain-containing protein 4236520..4237329 Roseiflexus sp. RS-1 5210354 YP_001277688.1 CDS RoseRS_3378 NC_009523.1 4237331 4238965 D PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 4237331..4238965 Roseiflexus sp. RS-1 5210355 YP_001277689.1 CDS RoseRS_3379 NC_009523.1 4238984 4242712 D PFAM: protein kinase; TPR repeat-containing protein; WD-40 repeat protein; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; protein kinase 4238984..4242712 Roseiflexus sp. RS-1 5210356 YP_001277690.1 CDS RoseRS_3380 NC_009523.1 4242716 4244095 D PFAM: von Willebrand factor, type A; von Willebrand factor, type A 4242716..4244095 Roseiflexus sp. RS-1 5210357 YP_001277691.1 CDS RoseRS_3382 NC_009523.1 4246009 4247066 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(4246009..4246539,4246539..4247066) Roseiflexus sp. RS-1 5210359 YP_001277692.1 CDS RoseRS_3383 NC_009523.1 4247632 4251624 D PFAM: protein kinase; TPR repeat-containing protein; WD-40 repeat protein; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; protein kinase 4247632..4251624 Roseiflexus sp. RS-1 5210360 YP_001277693.1 CDS RoseRS_3384 NC_009523.1 4251634 4252017 D hypothetical protein 4251634..4252017 Roseiflexus sp. RS-1 5210361 YP_001277694.1 CDS RoseRS_3385 NC_009523.1 4252019 4252651 D hypothetical protein 4252019..4252651 Roseiflexus sp. RS-1 5210362 YP_001277695.1 CDS RoseRS_3386 NC_009523.1 4252664 4253356 D PFAM: Forkhead-associated protein; FHA domain-containing protein 4252664..4253356 Roseiflexus sp. RS-1 5210363 YP_001277696.1 CDS RoseRS_3387 NC_009523.1 4253356 4254696 D hypothetical protein 4253356..4254696 Roseiflexus sp. RS-1 5210364 YP_001277697.1 CDS RoseRS_3388 NC_009523.1 4255040 4255387 D hypothetical protein 4255040..4255387 Roseiflexus sp. RS-1 5210365 YP_001277698.1 CDS RoseRS_3389 NC_009523.1 4255929 4256986 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(4255929..4256459,4256459..4256986) Roseiflexus sp. RS-1 5210366 YP_001277699.1 CDS RoseRS_3390 NC_009523.1 4257618 4258064 D hypothetical protein 4257618..4258064 Roseiflexus sp. RS-1 5210367 YP_001277700.1 CDS RoseRS_3391 NC_009523.1 4258720 4261122 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4258720..4261122 Roseiflexus sp. RS-1 5210368 YP_001277701.1 CDS RoseRS_3392 NC_009523.1 4261139 4262671 D PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: Armadillo domain protein; HEAT repeat-containing PBS lyase 4261139..4262671 Roseiflexus sp. RS-1 5210369 YP_001277702.1 CDS RoseRS_3393 NC_009523.1 4262668 4263267 D hypothetical protein 4262668..4263267 Roseiflexus sp. RS-1 5210370 YP_001277703.1 CDS RoseRS_3394 NC_009523.1 4263285 4264859 D PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: Armadillo domain protein; HEAT repeat-containing PBS lyase 4263285..4264859 Roseiflexus sp. RS-1 5210371 YP_001277704.1 CDS sucA NC_009523.1 4268190 4271045 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 4268190..4271045 Roseiflexus sp. RS-1 5210373 YP_001277705.1 CDS RoseRS_3397 NC_009523.1 4271058 4272260 D TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 4271058..4272260 Roseiflexus sp. RS-1 5210374 YP_001277706.1 CDS RoseRS_3398 NC_009523.1 4272277 4273188 R hypothetical protein complement(4272277..4273188) Roseiflexus sp. RS-1 5210375 YP_001277707.1 CDS RoseRS_3399 NC_009523.1 4273258 4274820 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(4273258..4274820) Roseiflexus sp. RS-1 5210376 YP_001277708.1 CDS rpsR NC_009523.1 4274927 4275199 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(4274927..4275199) Roseiflexus sp. RS-1 5210377 YP_001277709.1 CDS RoseRS_3401 NC_009523.1 4275220 4275675 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding, OB-fold, tRNA/helicase-type; single-strand binding protein complement(4275220..4275675) Roseiflexus sp. RS-1 5210378 YP_001277710.1 CDS RoseRS_3402 NC_009523.1 4275713 4276192 R PFAM: ribosomal protein S6; 30S ribosomal protein S6 complement(4275713..4276192) Roseiflexus sp. RS-1 5210379 YP_001277711.1 CDS RoseRS_3403 NC_009523.1 4276426 4277163 D PFAM: LmbE family protein; LmbE family protein 4276426..4277163 Roseiflexus sp. RS-1 5210380 YP_001277712.1 CDS RoseRS_3404 NC_009523.1 4277390 4278028 D PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; signal transduction protein 4277390..4278028 Roseiflexus sp. RS-1 5210381 YP_001277713.1 CDS RoseRS_3405 NC_009523.1 4278030 4278377 R hypothetical protein complement(4278030..4278377) Roseiflexus sp. RS-1 5210382 YP_001277714.1 CDS RoseRS_3406 NC_009523.1 4278356 4279006 R hypothetical protein complement(4278356..4279006) Roseiflexus sp. RS-1 5210383 YP_001277715.1 CDS RoseRS_3407 NC_009523.1 4278997 4279425 R TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein complement(4278997..4279425) Roseiflexus sp. RS-1 5210384 YP_001277716.1 CDS RoseRS_3408 NC_009523.1 4279428 4280177 R PFAM: protein of unknown function DUF820; hypothetical protein complement(4279428..4280177) Roseiflexus sp. RS-1 5210385 YP_001277717.1 CDS RoseRS_3409 NC_009523.1 4280223 4280930 R PFAM: protein of unknown function DUF820; hypothetical protein complement(4280223..4280930) Roseiflexus sp. RS-1 5210386 YP_001277718.1 CDS RoseRS_3410 NC_009523.1 4280945 4282615 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; carbohydrate kinase complement(4280945..4282615) Roseiflexus sp. RS-1 5210387 YP_001277719.1 CDS RoseRS_3411 NC_009523.1 4282840 4283403 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(4282840..4283403) Roseiflexus sp. RS-1 5210388 YP_001277720.1 CDS RoseRS_3412 NC_009523.1 4283823 4284107 D hypothetical protein 4283823..4284107 Roseiflexus sp. RS-1 5210389 YP_001277721.1 CDS RoseRS_3413 NC_009523.1 4284104 4284889 D PFAM: biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 4284104..4284889 Roseiflexus sp. RS-1 5210390 YP_001277722.1 CDS RoseRS_3414 NC_009523.1 4284942 4285934 R PFAM: glycosyl transferase, family 2; ribonuclease III complement(4284942..4285934) Roseiflexus sp. RS-1 5210391 YP_001277723.1 CDS RoseRS_3415 NC_009523.1 4286078 4288975 R TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; DNA polymerase I complement(4286078..4288975) Roseiflexus sp. RS-1 5210392 YP_001277724.1 CDS RoseRS_3416 NC_009523.1 4289025 4289294 R TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; addiction module antitoxin complement(4289025..4289294) Roseiflexus sp. RS-1 5210393 YP_001277725.1 CDS RoseRS_3417 NC_009523.1 4289294 4289890 R hypothetical protein complement(4289294..4289890) Roseiflexus sp. RS-1 5210394 YP_001277726.1 CDS RoseRS_3418 NC_009523.1 4289980 4290417 D hypothetical protein 4289980..4290417 Roseiflexus sp. RS-1 5210395 YP_001277727.1 CDS RoseRS_3419 NC_009523.1 4290467 4292932 D PFAM: protein of unknown function DUF214; hypothetical protein 4290467..4292932 Roseiflexus sp. RS-1 5210396 YP_001277728.1 CDS RoseRS_3420 NC_009523.1 4292961 4294283 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 4292961..4294283 Roseiflexus sp. RS-1 5210397 YP_001277729.1 CDS RoseRS_3421 NC_009523.1 4294258 4294929 D PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator 4294258..4294929 Roseiflexus sp. RS-1 5210398 YP_001277730.1 CDS RoseRS_3422 NC_009523.1 4295355 4296180 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein join(4295355..4295753,4295755..4296180) Roseiflexus sp. RS-1 5210399 YP_001277731.1 CDS RoseRS_3423 NC_009523.1 4296539 4297483 D TIGRFAM: methyltransferase FkbM family; FkbM family methyltransferase 4296539..4297483 Roseiflexus sp. RS-1 5210400 YP_001277732.1 CDS RoseRS_3424 NC_009523.1 4297656 4297988 D alpha/beta fold family hydrolase/acetyltransferase-like protein 4297656..4297988 Roseiflexus sp. RS-1 5210401 YP_001277733.1 CDS RoseRS_3425 NC_009523.1 4298382 4298615 D hypothetical protein 4298382..4298615 Roseiflexus sp. RS-1 5210402 YP_001277734.1 CDS RoseRS_3426 NC_009523.1 4298619 4298855 D hypothetical protein 4298619..4298855 Roseiflexus sp. RS-1 5210403 YP_001277735.1 CDS RoseRS_3427 NC_009523.1 4299362 4299979 R PFAM: protein of unknown function DUF218; hypothetical protein complement(4299362..4299979) Roseiflexus sp. RS-1 5210404 YP_001277736.1 CDS RoseRS_3428 NC_009523.1 4300143 4300826 D PFAM: LmbE family protein; LmbE family protein 4300143..4300826 Roseiflexus sp. RS-1 5210405 YP_001277737.1 CDS RoseRS_3429 NC_009523.1 4300962 4302173 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4300962..4302173) Roseiflexus sp. RS-1 5210406 YP_001277738.1 CDS RoseRS_3430 NC_009523.1 4302273 4304807 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 4302273..4304807 Roseiflexus sp. RS-1 5210407 YP_001277739.1 CDS RoseRS_3431 NC_009523.1 4304957 4305238 R hypothetical protein complement(4304957..4305238) Roseiflexus sp. RS-1 5210408 YP_001277740.1 CDS RoseRS_3432 NC_009523.1 4305442 4306746 D PFAM: PUCC protein; major facilitator superfamily MFS_1; PUCC protein 4305442..4306746 Roseiflexus sp. RS-1 5210409 YP_001277741.1 CDS RoseRS_3433 NC_009523.1 4306856 4307197 D hypothetical protein 4306856..4307197 Roseiflexus sp. RS-1 5210410 YP_001277742.1 CDS RoseRS_3434 NC_009523.1 4307410 4308381 D PFAM: aldo/keto reductase; pyridoxal 4-dehydrogenase 4307410..4308381 Roseiflexus sp. RS-1 5210411 YP_001277743.1 CDS RoseRS_3435 NC_009523.1 4308537 4309844 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 4308537..4309844 Roseiflexus sp. RS-1 5210412 YP_001277744.1 CDS RoseRS_3436 NC_009523.1 4310212 4310535 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 4310212..4310535 Roseiflexus sp. RS-1 5210413 YP_001277745.1 CDS RoseRS_3437 NC_009523.1 4310604 4310936 D PFAM: HEPN domain protein; HEPN domain-containing protein 4310604..4310936 Roseiflexus sp. RS-1 5210414 YP_001277746.1 CDS RoseRS_3438 NC_009523.1 4311519 4314641 D TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A 4311519..4314641 Roseiflexus sp. RS-1 5210415 YP_001277747.1 CDS RoseRS_3439 NC_009523.1 4315678 4317966 R TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter, 4TM/12TM fusion protein complement(4315678..4317966) Roseiflexus sp. RS-1 5210416 YP_001277748.1 CDS RoseRS_3440 NC_009523.1 4318137 4319165 R TIGRFAM: TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein complement(4318137..4319165) Roseiflexus sp. RS-1 5210417 YP_001277749.1 CDS RoseRS_3441 NC_009523.1 4319605 4320354 R PFAM: protein of unknown function DUF540; hypothetical protein complement(4319605..4320354) Roseiflexus sp. RS-1 5210418 YP_001277750.1 CDS RoseRS_3442 NC_009523.1 4320505 4320864 R PFAM: protein of unknown function DUF343; hypothetical protein complement(4320505..4320864) Roseiflexus sp. RS-1 5210419 YP_001277751.1 CDS RoseRS_3443 NC_009523.1 4320945 4322327 R PFAM: metallophosphoesterase; metallophosphoesterase complement(4320945..4322327) Roseiflexus sp. RS-1 5210420 YP_001277752.1 CDS RoseRS_3444 NC_009523.1 4322333 4322974 R PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase complement(4322333..4322974) Roseiflexus sp. RS-1 5210421 YP_001277753.1 CDS RoseRS_3445 NC_009523.1 4322994 4325522 R PFAM: protein of unknown function DUF88; hypothetical protein complement(4322994..4325522) Roseiflexus sp. RS-1 5210422 YP_001277754.1 CDS RoseRS_3446 NC_009523.1 4325962 4327437 R PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; deoxyribodipyrimidine photolyase complement(4325962..4327437) Roseiflexus sp. RS-1 5210423 YP_001277755.1 CDS RoseRS_3447 NC_009523.1 4327988 4328284 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(4327988..4328284) Roseiflexus sp. RS-1 5210424 YP_001277756.1 CDS RoseRS_3448 NC_009523.1 4328305 4328517 R hypothetical protein complement(4328305..4328517) Roseiflexus sp. RS-1 5210425 YP_001277757.1 CDS RoseRS_3449 NC_009523.1 4328624 4329697 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(4328624..4329697) Roseiflexus sp. RS-1 5210426 YP_001277758.1 CDS RoseRS_3450 NC_009523.1 4329779 4331527 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4329779..4331527) Roseiflexus sp. RS-1 5210427 YP_001277759.1 CDS RoseRS_3451 NC_009523.1 4331950 4332735 R PFAM: cobalt transport protein; cobalt transport protein complement(4331950..4332735) Roseiflexus sp. RS-1 5210428 YP_001277760.1 CDS RoseRS_3452 NC_009523.1 4332747 4333343 R signal transduction histidine kinase, LytS complement(4332747..4333343) Roseiflexus sp. RS-1 5210429 YP_001277761.1 CDS RoseRS_3453 NC_009523.1 4333589 4334242 D hypothetical protein 4333589..4334242 Roseiflexus sp. RS-1 5210430 YP_001277762.1 CDS RoseRS_3454 NC_009523.1 4334243 4335364 D PFAM: oxidoreductase domain protein; homoserine dehydrogenase, NAD-binding; oxidoreductase domain-containing protein 4334243..4335364 Roseiflexus sp. RS-1 5210431 YP_001277763.1 CDS RoseRS_3455 NC_009523.1 4335374 4336354 D PFAM: PfkB domain protein; ribokinase-like domain-containing protein 4335374..4336354 Roseiflexus sp. RS-1 5210432 YP_001277764.1 CDS RoseRS_3456 NC_009523.1 4336845 4337486 R TIGRFAM: metal dependent phophohydrolase; metal dependent phophohydrolase complement(4336845..4337486) Roseiflexus sp. RS-1 5210433 YP_001277765.1 CDS RoseRS_3457 NC_009523.1 4337635 4337931 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(4337635..4337931) Roseiflexus sp. RS-1 5210434 YP_001277766.1 CDS RoseRS_3458 NC_009523.1 4338039 4338797 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; RNA methyltransferase complement(4338039..4338797) Roseiflexus sp. RS-1 5210435 YP_001277767.1 CDS RoseRS_3459 NC_009523.1 4338815 4339927 R TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; chaperone protein DnaJ complement(4338815..4339927) Roseiflexus sp. RS-1 5210436 YP_001277768.1 CDS RoseRS_3460 NC_009523.1 4339966 4341804 R TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK complement(4339966..4341804) Roseiflexus sp. RS-1 5210437 YP_001277769.1 CDS RoseRS_3461 NC_009523.1 4341797 4342411 R PFAM: GrpE protein; GrpE protein HSP-70 cofactor complement(4341797..4342411) Roseiflexus sp. RS-1 5210438 YP_001277770.1 CDS RoseRS_3462 NC_009523.1 4342443 4343522 R TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; heat-inducible transcription repressor HrcA complement(4342443..4343522) Roseiflexus sp. RS-1 5210439 YP_001277771.1 CDS RoseRS_3463 NC_009523.1 4343818 4344075 D hypothetical protein 4343818..4344075 Roseiflexus sp. RS-1 5210440 YP_001277772.1 CDS RoseRS_3464 NC_009523.1 4344284 4344850 D PFAM: NUDIX hydrolase; NUDIX hydrolase 4344284..4344850 Roseiflexus sp. RS-1 5210441 YP_001277773.1 CDS RoseRS_3465 NC_009523.1 4344887 4345378 D PFAM: NUDIX hydrolase; NUDIX hydrolase 4344887..4345378 Roseiflexus sp. RS-1 5210442 YP_001277774.1 CDS RoseRS_3466 NC_009523.1 4345391 4346665 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 4345391..4346665 Roseiflexus sp. RS-1 5210443 YP_001277775.1 CDS RoseRS_3467 NC_009523.1 4347067 4348110 D hypothetical protein 4347067..4348110 Roseiflexus sp. RS-1 5210444 YP_001277776.1 CDS RoseRS_3468 NC_009523.1 4348119 4349366 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(4348119..4349366) Roseiflexus sp. RS-1 5210445 YP_001277777.1 CDS RoseRS_3469 NC_009523.1 4349453 4350427 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; malonyl CoA-acyl carrier protein transacylase complement(4349453..4350427) Roseiflexus sp. RS-1 5210446 YP_001277778.1 CDS RoseRS_3470 NC_009523.1 4350687 4350929 D PFAM: protein of unknown function DUF970; hypothetical protein 4350687..4350929 Roseiflexus sp. RS-1 5210447 YP_001277779.1 CDS RoseRS_3471 NC_009523.1 4350926 4352098 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4350926..4352098 Roseiflexus sp. RS-1 5210448 YP_001277780.1 CDS RoseRS_3472 NC_009523.1 4352698 4353981 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4352698..4353981 Roseiflexus sp. RS-1 5210449 YP_001277781.1 CDS RoseRS_3473 NC_009523.1 4354316 4355584 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase, HAMP region domain protein; anti-sigma-factor antagonist 4354316..4355584 Roseiflexus sp. RS-1 5210450 YP_001277782.1 CDS RoseRS_3474 NC_009523.1 4355653 4356054 R hypothetical protein complement(4355653..4356054) Roseiflexus sp. RS-1 5210451 YP_001277783.1 CDS RoseRS_3475 NC_009523.1 4356470 4358149 R PFAM: amine oxidase; FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(4356470..4358149) Roseiflexus sp. RS-1 5210452 YP_001277784.1 CDS RoseRS_3476 NC_009523.1 4358458 4359600 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 4358458..4359600 Roseiflexus sp. RS-1 5210453 YP_001277785.1 CDS RoseRS_3477 NC_009523.1 4359597 4360349 R PFAM: CobB/CobQ domain protein glutamine amidotransferase; glutamine amidotransferase complement(4359597..4360349) Roseiflexus sp. RS-1 5210454 YP_001277786.1 CDS RoseRS_3478 NC_009523.1 4360545 4361432 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4360545..4361432 Roseiflexus sp. RS-1 5210455 YP_001277787.1 CDS RoseRS_3479 NC_009523.1 4361907 4362716 R PFAM: YceI family protein; YceI family protein complement(4361907..4362716) Roseiflexus sp. RS-1 5210456 YP_001277788.1 CDS RoseRS_3480 NC_009523.1 4362883 4365630 D PFAM: glycoside hydrolase, family 3 domain protein; PA14 domain protein; SMART: PA14-related domain protein; glycoside hydrolase family 3 4362883..4365630 Roseiflexus sp. RS-1 5210457 YP_001277789.1 CDS RoseRS_3481 NC_009523.1 4366848 4367204 D hypothetical protein 4366848..4367204 Roseiflexus sp. RS-1 5210458 YP_001277790.1 CDS RoseRS_3482 NC_009523.1 4367323 4367934 D PFAM: protein of unknown function DUF461; hypothetical protein 4367323..4367934 Roseiflexus sp. RS-1 5210459 YP_001277791.1 CDS RoseRS_3483 NC_009523.1 4368201 4368728 D hypothetical protein 4368201..4368728 Roseiflexus sp. RS-1 5210460 YP_001277792.1 CDS RoseRS_3484 NC_009523.1 4368725 4369093 D hypothetical protein 4368725..4369093 Roseiflexus sp. RS-1 5210461 YP_001277793.1 CDS RoseRS_3485 NC_009523.1 4369090 4369800 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 4369090..4369800 Roseiflexus sp. RS-1 5210462 YP_001277794.1 CDS RoseRS_3486 NC_009523.1 4369803 4371218 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 4369803..4371218 Roseiflexus sp. RS-1 5210463 YP_001277795.1 CDS RoseRS_3487 NC_009523.1 4371425 4372589 R hypothetical protein complement(join(4371425..4372321,4372323..4372589)) Roseiflexus sp. RS-1 5210464 YP_001277796.1 CDS RoseRS_3488 NC_009523.1 4373039 4374325 R TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I complement(4373039..4374325) Roseiflexus sp. RS-1 5210465 YP_001277797.1 CDS RoseRS_3489 NC_009523.1 4374722 4375702 D hypothetical protein 4374722..4375702 Roseiflexus sp. RS-1 5210466 YP_001277798.1 CDS RoseRS_3490 NC_009523.1 4375757 4377190 R PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase complement(4375757..4377190) Roseiflexus sp. RS-1 5210467 YP_001277799.1 CDS RoseRS_3491 NC_009523.1 4377504 4378586 D PFAM: HEAT domain containing protein; response regulator receiver/SARP domain-containing protein 4377504..4378586 Roseiflexus sp. RS-1 5210468 YP_001277800.1 CDS RoseRS_3492 NC_009523.1 4379065 4379760 D hypothetical protein 4379065..4379760 Roseiflexus sp. RS-1 5210469 YP_001277801.1 CDS RoseRS_3493 NC_009523.1 4379841 4380119 D PFAM: protein of unknown function DUF909; hypothetical protein 4379841..4380119 Roseiflexus sp. RS-1 5210470 YP_001277802.1 CDS RoseRS_3494 NC_009523.1 4380162 4380443 D PFAM: protein of unknown function DUF909; hypothetical protein 4380162..4380443 Roseiflexus sp. RS-1 5210471 YP_001277803.1 CDS RoseRS_3495 NC_009523.1 4380500 4385167 D PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; cell division protein FtsK 4380500..4385167 Roseiflexus sp. RS-1 5210472 YP_001277804.1 CDS RoseRS_3496 NC_009523.1 4385160 4386011 D PFAM: Forkhead-associated protein; FHA domain-containing protein 4385160..4386011 Roseiflexus sp. RS-1 5210473 YP_001277805.1 CDS RoseRS_3497 NC_009523.1 4386008 4387234 D SMART: von Willebrand factor, type A; von Willebrand factor, type A 4386008..4387234 Roseiflexus sp. RS-1 5210474 YP_001277806.1 CDS RoseRS_3498 NC_009523.1 4387251 4388630 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 4387251..4388630 Roseiflexus sp. RS-1 5210475 YP_001277807.1 CDS RoseRS_3499 NC_009523.1 4388655 4390406 D PFAM: protein phosphatase 2C domain protein; PASTA domain containing protein; Stage II sporulation E family protein; protein PASTA domain-containing protein 4388655..4390406 Roseiflexus sp. RS-1 5210476 YP_001277808.1 CDS RoseRS_3500 NC_009523.1 4390456 4391760 D hypothetical protein 4390456..4391760 Roseiflexus sp. RS-1 5210477 YP_001277809.1 CDS RoseRS_3501 NC_009523.1 4391814 4392848 D hypothetical protein 4391814..4392848 Roseiflexus sp. RS-1 5210478 YP_001277810.1 CDS RoseRS_3502 NC_009523.1 4392903 4393742 D PFAM: CHAP domain containing protein; CHAP domain-containing protein 4392903..4393742 Roseiflexus sp. RS-1 5210479 YP_001277811.1 CDS RoseRS_3503 NC_009523.1 4393806 4394201 D hypothetical protein 4393806..4394201 Roseiflexus sp. RS-1 5210480 YP_001277812.1 CDS RoseRS_3504 NC_009523.1 4394294 4395289 D PFAM: Allergen V5/Tpx-1 family protein; allergen V5/Tpx-1 family protein 4394294..4395289 Roseiflexus sp. RS-1 5210481 YP_001277813.1 CDS RoseRS_3505 NC_009523.1 4395345 4395692 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(4395345..4395692) Roseiflexus sp. RS-1 5210482 YP_001277814.1 CDS RoseRS_3506 NC_009523.1 4395685 4396110 R TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; nucleotidyltransferase substrate-binding protein complement(4395685..4396110) Roseiflexus sp. RS-1 5210483 YP_001277815.1 CDS RoseRS_3507 NC_009523.1 4396328 4397362 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 4396328..4397362 Roseiflexus sp. RS-1 5210484 YP_001277816.1 CDS RoseRS_3508 NC_009523.1 4397740 4398819 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(4397740..4398819) Roseiflexus sp. RS-1 5210485 YP_001277817.1 CDS RoseRS_3509 NC_009523.1 4398832 4399812 R PFAM: Terpene synthase, metal-binding domain protein; terpene synthase metal-binding domain-containing protein complement(4398832..4399812) Roseiflexus sp. RS-1 5210486 YP_001277818.1 CDS RoseRS_3510 NC_009523.1 4399844 4400692 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(4399844..4400692) Roseiflexus sp. RS-1 5210487 YP_001277819.1 CDS RoseRS_3511 NC_009523.1 4400888 4401982 R PFAM: beta-lactamase; beta-lactamase complement(4400888..4401982) Roseiflexus sp. RS-1 5210488 YP_001277820.1 CDS RoseRS_3512 NC_009523.1 4402145 4403131 R hypothetical protein complement(4402145..4403131) Roseiflexus sp. RS-1 5210489 YP_001277821.1 CDS RoseRS_3513 NC_009523.1 4403886 4404347 D hypothetical protein 4403886..4404347 Roseiflexus sp. RS-1 5210490 YP_001277822.1 CDS RoseRS_3514 NC_009523.1 4404969 4406468 R PFAM: alpha-L-arabinofuranosidase domain protein; alpha-N-arabinofuranosidase complement(4404969..4406468) Roseiflexus sp. RS-1 5210491 YP_001277823.1 CDS RoseRS_3515 NC_009523.1 4406874 4407548 R TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; type II haloacid dehalogenase complement(4406874..4407548) Roseiflexus sp. RS-1 5210492 YP_001277824.1 CDS RoseRS_3516 NC_009523.1 4407642 4408148 R hypothetical protein complement(4407642..4408148) Roseiflexus sp. RS-1 5210493 YP_001277825.1 CDS RoseRS_3517 NC_009523.1 4408152 4408532 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(4408152..4408532) Roseiflexus sp. RS-1 5210494 YP_001277826.1 CDS RoseRS_3518 NC_009523.1 4408751 4411279 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(4408751..4411279) Roseiflexus sp. RS-1 5210495 YP_001277827.1 CDS RoseRS_3519 NC_009523.1 4411292 4412137 R TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein complement(4411292..4412137) Roseiflexus sp. RS-1 5210496 YP_001277828.1 CDS RoseRS_3520 NC_009523.1 4412141 4412989 R TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein complement(4412141..4412989) Roseiflexus sp. RS-1 5210497 YP_001277829.1 CDS RoseRS_3521 NC_009523.1 4413038 4414591 R PFAM: Dak phosphatase; Dak phosphatase complement(4413038..4414591) Roseiflexus sp. RS-1 5210498 YP_001277830.1 CDS RoseRS_3522 NC_009523.1 4414709 4415053 D hypothetical protein 4414709..4415053 Roseiflexus sp. RS-1 5210499 YP_001277831.1 CDS RoseRS_3523 NC_009523.1 4415062 4415268 D PFAM: ribosomal protein L28; 50S ribosomal protein L28 4415062..4415268 Roseiflexus sp. RS-1 5210500 YP_001277832.1 CDS RoseRS_3524 NC_009523.1 4415369 4416184 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; cof family hydrolase complement(4415369..4416184) Roseiflexus sp. RS-1 5210501 YP_001277833.1 CDS RoseRS_3525 NC_009523.1 4416169 4417026 R TIGRFAM: modification methylase, HemK family; PFAM: putative RNA methylase; methyltransferase small; HemK family modification methylase complement(4416169..4417026) Roseiflexus sp. RS-1 5210502 YP_001277834.1 CDS RoseRS_3526 NC_009523.1 4417029 4417562 R hypothetical protein complement(4417029..4417562) Roseiflexus sp. RS-1 5210503 YP_001277835.1 CDS RoseRS_3527 NC_009523.1 4417583 4419106 R PFAM: SpoVR family protein; SpoVR family protein complement(4417583..4419106) Roseiflexus sp. RS-1 5210504 YP_001277836.1 CDS RoseRS_3528 NC_009523.1 4419106 4420215 R PFAM: protein of unknown function DUF444; hypothetical protein complement(4419106..4420215) Roseiflexus sp. RS-1 5210505 YP_001277837.1 CDS RoseRS_3529 NC_009523.1 4420347 4422425 R PFAM: PrkA serine kinase; PrkA AAA domain protein; putative serine protein kinase PrkA complement(4420347..4422425) Roseiflexus sp. RS-1 5210506 YP_001277838.1 CDS RoseRS_3530 NC_009523.1 4422775 4423605 R PFAM: protein of unknown function DUF62; hypothetical protein complement(4422775..4423605) Roseiflexus sp. RS-1 5210507 YP_001277839.1 CDS RoseRS_3531 NC_009523.1 4423617 4425374 R PFAM: Dynamin family protein; GTP-binding protein, HSR1-related; Miro domain protein; dynamin family protein complement(4423617..4425374) Roseiflexus sp. RS-1 5210508 YP_001277840.1 CDS RoseRS_3532 NC_009523.1 4425387 4425662 R hypothetical protein complement(4425387..4425662) Roseiflexus sp. RS-1 5210509 YP_001277841.1 CDS RoseRS_3533 NC_009523.1 4425640 4427733 R PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; peptidase S9 prolyl oligopeptidase complement(4425640..4427733) Roseiflexus sp. RS-1 5210510 YP_001277842.1 CDS RoseRS_3534 NC_009523.1 4427836 4428177 R hypothetical protein complement(4427836..4428177) Roseiflexus sp. RS-1 5210511 YP_001277843.1 CDS RoseRS_3535 NC_009523.1 4428745 4428966 R hypothetical protein complement(4428745..4428966) Roseiflexus sp. RS-1 5210513 YP_001277844.1 CDS RoseRS_3536 NC_009523.1 4430118 4432079 R TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein complement(4430118..4432079) Roseiflexus sp. RS-1 5210514 YP_001277845.1 CDS RoseRS_3537 NC_009523.1 4432284 4433138 R protein-disulfide isomerase-like protein complement(4432284..4433138) Roseiflexus sp. RS-1 5210515 YP_001277846.1 CDS RoseRS_3538 NC_009523.1 4433182 4433640 R hypothetical protein complement(4433182..4433640) Roseiflexus sp. RS-1 5210516 YP_001277847.1 CDS RoseRS_3539 NC_009523.1 4433698 4435122 R PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit complement(4433698..4435122) Roseiflexus sp. RS-1 5210517 YP_001277848.1 CDS RoseRS_3540 NC_009523.1 4435140 4435685 R PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit complement(4435140..4435685) Roseiflexus sp. RS-1 5210518 YP_001277849.1 CDS RoseRS_3541 NC_009523.1 4435701 4436408 R with HoxF and HoxE catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution; bidirectional hydrogenase complex protein HoxU complement(4435701..4436408) Roseiflexus sp. RS-1 5210519 YP_001277850.1 CDS RoseRS_3542 NC_009523.1 4436429 4438042 R PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH dehydrogenase (quinone) complement(4436429..4438042) Roseiflexus sp. RS-1 5210520 YP_001277851.1 CDS RoseRS_3543 NC_009523.1 4438275 4438811 R with HoxF and HoxU catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution; bidirectional hydrogenase complex protein HoxE complement(4438275..4438811) Roseiflexus sp. RS-1 5210521 YP_001277852.1 CDS RoseRS_3544 NC_009523.1 4438960 4441860 D PFAM: von Willebrand factor, type A; protein of unknown function DUF1355; von Willebrand factor, type A 4438960..4441860 Roseiflexus sp. RS-1 5210522 YP_001277853.1 CDS RoseRS_3545 NC_009523.1 4441879 4443870 R PFAM: protein of unknown function DUF1680; hypothetical protein complement(4441879..4443870) Roseiflexus sp. RS-1 5210523 YP_001277854.1 CDS RoseRS_3546 NC_009523.1 4444177 4444887 R hypothetical protein complement(4444177..4444887) Roseiflexus sp. RS-1 5210524 YP_001277855.1 CDS RoseRS_3547 NC_009523.1 4444963 4445403 R PFAM: membrane protein of unknown function; hypothetical protein complement(4444963..4445403) Roseiflexus sp. RS-1 5210525 YP_001277856.1 CDS RoseRS_3548 NC_009523.1 4445400 4445966 R PFAM: protein of unknown function DUF820; hypothetical protein complement(4445400..4445966) Roseiflexus sp. RS-1 5210526 YP_001277857.1 CDS RoseRS_3549 NC_009523.1 4446086 4446811 D ICC-like phosphoesterase 4446086..4446811 Roseiflexus sp. RS-1 5210527 YP_001277858.1 CDS RoseRS_3550 NC_009523.1 4446732 4447979 R PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(4446732..4447979) Roseiflexus sp. RS-1 5210528 YP_001277859.1 CDS RoseRS_3551 NC_009523.1 4448371 4449309 D PFAM: Acetamidase/Formamidase; acetamidase/formamidase 4448371..4449309 Roseiflexus sp. RS-1 5210529 YP_001277860.1 CDS RoseRS_3553 NC_009523.1 4450022 4450678 D PFAM: protein of unknown function DUF820; hypothetical protein 4450022..4450678 Roseiflexus sp. RS-1 5210531 YP_001277861.1 CDS RoseRS_3554 NC_009523.1 4450735 4451346 D PFAM: protein of unknown function DUF820; hypothetical protein 4450735..4451346 Roseiflexus sp. RS-1 5210532 YP_001277862.1 CDS RoseRS_3555 NC_009523.1 4451797 4452273 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase complement(4451797..4452273) Roseiflexus sp. RS-1 5210533 YP_001277863.1 CDS RoseRS_3556 NC_009523.1 4453187 4453768 D hypothetical protein 4453187..4453768 Roseiflexus sp. RS-1 5210534 YP_001277864.1 CDS RoseRS_3557 NC_009523.1 4454050 4454814 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 4454050..4454814 Roseiflexus sp. RS-1 5210535 YP_001277865.1 CDS RoseRS_3558 NC_009523.1 4454811 4455164 D PFAM: protein of unknown function DUF86; hypothetical protein 4454811..4455164 Roseiflexus sp. RS-1 5210536 YP_001277866.1 CDS RoseRS_3559 NC_009523.1 4455161 4455598 D hypothetical protein 4455161..4455598 Roseiflexus sp. RS-1 5210537 YP_001277867.1 CDS RoseRS_3560 NC_009523.1 4455583 4456083 D hypothetical protein 4455583..4456083 Roseiflexus sp. RS-1 5210538 YP_001277868.1 CDS RoseRS_3561 NC_009523.1 4456195 4457020 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein join(4456195..4456593,4456595..4457020) Roseiflexus sp. RS-1 5210539 YP_001277869.1 CDS RoseRS_3562 NC_009523.1 4457051 4458418 D adenine-specific DNA methylase 4457051..4458418 Roseiflexus sp. RS-1 5210540 YP_001277870.1 CDS RoseRS_3563 NC_009523.1 4458924 4462292 D ATPase AAA 4458924..4462292 Roseiflexus sp. RS-1 5210541 YP_001277871.1 CDS RoseRS_3564 NC_009523.1 4463369 4464193 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4463369..4464193 Roseiflexus sp. RS-1 5210542 YP_001277872.1 CDS RoseRS_3565 NC_009523.1 4464174 4465256 D PFAM: periplasmic binding protein; periplasmic binding protein 4464174..4465256 Roseiflexus sp. RS-1 5210543 YP_001277873.1 CDS RoseRS_3566 NC_009523.1 4465253 4466317 D PFAM: transport system permease protein; transport system permease 4465253..4466317 Roseiflexus sp. RS-1 5210544 YP_001277874.1 CDS RoseRS_3567 NC_009523.1 4466334 4466717 D hypothetical protein 4466334..4466717 Roseiflexus sp. RS-1 5210545 YP_001277875.1 CDS RoseRS_3568 NC_009523.1 4466742 4467707 D PFAM: cytochrome c assembly protein; cytochrome c assembly protein 4466742..4467707 Roseiflexus sp. RS-1 5210546 YP_001277876.1 CDS RoseRS_3569 NC_009523.1 4467704 4468051 D hypothetical protein 4467704..4468051 Roseiflexus sp. RS-1 5210547 YP_001277877.1 CDS RoseRS_3570 NC_009523.1 4468048 4468407 D PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4468048..4468407 Roseiflexus sp. RS-1 5210548 YP_001277878.1 CDS RoseRS_3571 NC_009523.1 4468452 4469411 D PFAM: transport system permease protein; transport system permease 4468452..4469411 Roseiflexus sp. RS-1 5210549 YP_001277879.1 CDS RoseRS_3572 NC_009523.1 4469512 4469895 D hypothetical protein 4469512..4469895 Roseiflexus sp. RS-1 5210550 YP_001277880.1 CDS RoseRS_3573 NC_009523.1 4469877 4470413 D hypothetical protein 4469877..4470413 Roseiflexus sp. RS-1 5210551 YP_001277881.1 CDS RoseRS_3574 NC_009523.1 4470417 4471136 D PFAM: iron dependent repressor; iron dependent repressor 4470417..4471136 Roseiflexus sp. RS-1 5210552 YP_001277882.1 CDS RoseRS_3576 NC_009523.1 4472523 4472726 D TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin arginine-targeting protein translocase 4472523..4472726 Roseiflexus sp. RS-1 5210554 YP_001277883.1 CDS RoseRS_3577 NC_009523.1 4472847 4474166 D PFAM: GTP-binding protein, HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG domain-containing protein 4472847..4474166 Roseiflexus sp. RS-1 5210555 YP_001277884.1 CDS RoseRS_3578 NC_009523.1 4474200 4475738 D PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 4474200..4475738 Roseiflexus sp. RS-1 5210556 YP_001277885.1 CDS RoseRS_3579 NC_009523.1 4475881 4476834 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 4475881..4476834 Roseiflexus sp. RS-1 5210557 YP_001277886.1 CDS RoseRS_3580 NC_009523.1 4476879 4478393 D PFAM: O-antigen polymerase; O-antigen polymerase 4476879..4478393 Roseiflexus sp. RS-1 5210558 YP_001277887.1 CDS RoseRS_3581 NC_009523.1 4478345 4479298 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 4478345..4479298 Roseiflexus sp. RS-1 5210559 YP_001277888.1 CDS RoseRS_3582 NC_009523.1 4479288 4480424 D PFAM: conserved hypothetical protein 374; hypothetical protein 4479288..4480424 Roseiflexus sp. RS-1 5210560 YP_001277889.1 CDS RoseRS_3583 NC_009523.1 4480442 4481668 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4480442..4481668 Roseiflexus sp. RS-1 5210561 YP_001277890.1 CDS RoseRS_3584 NC_009523.1 4481655 4482236 D hypothetical protein 4481655..4482236 Roseiflexus sp. RS-1 5210562 YP_001277891.1 CDS RoseRS_3585 NC_009523.1 4482260 4483744 D PFAM: carbohydrate kinase, FGGY; carbohydrate kinase FGGY 4482260..4483744 Roseiflexus sp. RS-1 5210563 YP_001277892.1 CDS RoseRS_3586 NC_009523.1 4484117 4484500 R hypothetical protein complement(4484117..4484500) Roseiflexus sp. RS-1 5210564 YP_001277893.1 CDS RoseRS_3588 NC_009523.1 4485109 4486164 R TIGRFAM: DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' complement(4485109..4486164) Roseiflexus sp. RS-1 5210566 YP_001277894.1 CDS RoseRS_3589 NC_009523.1 4486245 4486625 D PFAM: response regulator receiver; response regulator receiver protein 4486245..4486625 Roseiflexus sp. RS-1 5210567 YP_001277895.1 CDS RoseRS_3590 NC_009523.1 4486976 4488415 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(4486976..4488415) Roseiflexus sp. RS-1 5210568 YP_001277896.1 CDS RoseRS_3591 NC_009523.1 4488457 4489317 R TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; putative undecaprenol kinase complement(4488457..4489317) Roseiflexus sp. RS-1 5210569 YP_001277897.1 CDS RoseRS_3592 NC_009523.1 4489811 4490197 D hypothetical protein 4489811..4490197 Roseiflexus sp. RS-1 5210570 YP_001277898.1 CDS RoseRS_3593 NC_009523.1 4490194 4491375 R PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase complement(4490194..4491375) Roseiflexus sp. RS-1 5210571 YP_001277899.1 CDS RoseRS_3594 NC_009523.1 4491591 4492856 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4491591..4492856) Roseiflexus sp. RS-1 5210572 YP_001277900.1 CDS RoseRS_3595 NC_009523.1 4492865 4493272 R PFAM: diacylglycerol kinase; diacylglycerol kinase complement(4492865..4493272) Roseiflexus sp. RS-1 5210573 YP_001277901.1 CDS RoseRS_3596 NC_009523.1 4493353 4493835 R PFAM: protein of unknown function UPF0054; hypothetical protein complement(4493353..4493835) Roseiflexus sp. RS-1 5210574 YP_001277902.1 CDS RoseRS_3597 NC_009523.1 4494059 4496260 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal-dependent phosphohydrolase, 7TM extracellular region; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(4494059..4496260) Roseiflexus sp. RS-1 5210575 YP_001277903.1 CDS RoseRS_3598 NC_009523.1 4496294 4496815 R PFAM: GatB/Yqey domain protein; GatB/Yqey domain-containing protein complement(4496294..4496815) Roseiflexus sp. RS-1 5210576 YP_001277904.1 CDS gmk NC_009523.1 4496847 4497479 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(4496847..4497479) Roseiflexus sp. RS-1 5210577 YP_001277905.1 CDS RoseRS_3600 NC_009523.1 4497522 4499273 D PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; fibronectin-binding A domain-containing protein 4497522..4499273 Roseiflexus sp. RS-1 5210578 YP_001277906.1 CDS RoseRS_3601 NC_009523.1 4499357 4499587 R hypothetical protein complement(4499357..4499587) Roseiflexus sp. RS-1 5210579 YP_001277907.1 CDS RoseRS_3602 NC_009523.1 4500077 4500343 D hypothetical protein 4500077..4500343 Roseiflexus sp. RS-1 5210580 YP_001277908.1 CDS RoseRS_3603 NC_009523.1 4500365 4502137 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; acetyl-CoA carboxylase, biotin carboxylase 4500365..4502137 Roseiflexus sp. RS-1 5210581 YP_001277909.1 CDS RoseRS_3604 NC_009523.1 4502145 4503023 D PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 4502145..4503023 Roseiflexus sp. RS-1 5210582 YP_001277910.1 CDS RoseRS_3605 NC_009523.1 4503732 4504949 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4503732..4504949) Roseiflexus sp. RS-1 5210583 YP_001277911.1 CDS RoseRS_3606 NC_009523.1 4504970 4505686 R PFAM: Haloacid dehalogenase domain protein hydrolase; hydrolase complement(4504970..4505686) Roseiflexus sp. RS-1 5210584 YP_001277912.1 CDS RoseRS_3607 NC_009523.1 4505738 4507075 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(4505738..4507075) Roseiflexus sp. RS-1 5210585 YP_001277913.1 CDS RoseRS_3608 NC_009523.1 4507428 4508111 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(4507428..4508111) Roseiflexus sp. RS-1 5210586 YP_001277914.1 CDS RoseRS_3609 NC_009523.1 4508598 4509608 D PFAM: sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region 4508598..4509608 Roseiflexus sp. RS-1 5210587 YP_001277915.1 CDS RoseRS_3610 NC_009523.1 4509900 4511030 D TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate binding protein 4509900..4511030 Roseiflexus sp. RS-1 5210588 YP_001277916.1 CDS RoseRS_3611 NC_009523.1 4511027 4512760 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 4511027..4512760 Roseiflexus sp. RS-1 5210589 YP_001277917.1 CDS RoseRS_3612 NC_009523.1 4512774 4513160 D PFAM: response regulator receiver; response regulator receiver protein 4512774..4513160 Roseiflexus sp. RS-1 5210590 YP_001277918.1 CDS RoseRS_3613 NC_009523.1 4513255 4513518 R hypothetical protein complement(4513255..4513518) Roseiflexus sp. RS-1 5210591 YP_001277919.1 CDS RoseRS_3614 NC_009523.1 4513938 4515284 R PFAM: glycoside hydrolase, family 1; Beta-glucosidase complement(4513938..4515284) Roseiflexus sp. RS-1 5210592 YP_001277920.1 CDS RoseRS_3615 NC_009523.1 4515335 4516588 R PFAM: oxidoreductase domain protein; oxidoreductase domain-containing protein complement(4515335..4516588) Roseiflexus sp. RS-1 5210593 YP_001277921.1 CDS RoseRS_3616 NC_009523.1 4516585 4518444 R PFAM: glycoside hydrolase, family 20; glycoside hydrolase family protein complement(4516585..4518444) Roseiflexus sp. RS-1 5210594 YP_001277922.1 CDS RoseRS_3617 NC_009523.1 4518517 4519557 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(4518517..4519557) Roseiflexus sp. RS-1 5210595 YP_001277923.1 CDS RoseRS_3618 NC_009523.1 4519833 4522340 R PFAM: Spermine synthase; spermine synthase complement(4519833..4522340) Roseiflexus sp. RS-1 5210596 YP_001277924.1 CDS RoseRS_3619 NC_009523.1 4522488 4523954 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(4522488..4523954) Roseiflexus sp. RS-1 5210597 YP_001277925.1 CDS RoseRS_3620 NC_009523.1 4524257 4525165 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4524257..4525165) Roseiflexus sp. RS-1 5210598 YP_001277926.1 CDS RoseRS_3621 NC_009523.1 4525205 4526212 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4525205..4526212) Roseiflexus sp. RS-1 5210599 YP_001277927.1 CDS RoseRS_3622 NC_009523.1 4526277 4527545 R PFAM: Pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone complement(4526277..4527545) Roseiflexus sp. RS-1 5210600 YP_001277928.1 CDS RoseRS_3623 NC_009523.1 4527697 4528704 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(4527697..4528704) Roseiflexus sp. RS-1 5210601 YP_001277929.1 CDS RoseRS_3624 NC_009523.1 4528778 4529092 R PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(4528778..4529092) Roseiflexus sp. RS-1 5210602 YP_001277930.1 CDS RoseRS_3625 NC_009523.1 4529114 4531111 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase complement(4529114..4531111) Roseiflexus sp. RS-1 5210603 YP_001277931.1 CDS RoseRS_3626 NC_009523.1 4531122 4533032 R hypothetical protein complement(4531122..4533032) Roseiflexus sp. RS-1 5210604 YP_001277932.1 CDS RoseRS_3627 NC_009523.1 4533166 4535892 D PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; glycosyl transferase family protein 4533166..4535892 Roseiflexus sp. RS-1 5210605 YP_001277933.1 CDS RoseRS_3628 NC_009523.1 4535893 4536510 R hypothetical protein complement(4535893..4536510) Roseiflexus sp. RS-1 5210606 YP_001277934.1 CDS RoseRS_3629 NC_009523.1 4536573 4536806 D PFAM: protein of unknown function DUF433; hypothetical protein 4536573..4536806 Roseiflexus sp. RS-1 5210607 YP_001277935.1 CDS RoseRS_3630 NC_009523.1 4537134 4539956 R hypothetical protein complement(4537134..4539956) Roseiflexus sp. RS-1 5210608 YP_001277936.1 CDS RoseRS_3631 NC_009523.1 4539980 4541152 R PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase complement(4539980..4541152) Roseiflexus sp. RS-1 5210609 YP_001277937.1 CDS RoseRS_3632 NC_009523.1 4541343 4541741 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4541343..4541741 Roseiflexus sp. RS-1 5210610 YP_001277938.1 CDS RoseRS_3633 NC_009523.1 4542023 4542985 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(4542023..4542985) Roseiflexus sp. RS-1 5210611 YP_001277939.1 CDS RoseRS_3634 NC_009523.1 4543554 4544576 D PFAM: CBS domain containing protein; CBS domain-containing protein 4543554..4544576 Roseiflexus sp. RS-1 5210612 YP_001277940.1 CDS RoseRS_3635 NC_009523.1 4544482 4545552 R hypothetical protein complement(4544482..4545552) Roseiflexus sp. RS-1 5210613 YP_001277941.1 CDS RoseRS_3636 NC_009523.1 4545552 4547339 R hypothetical protein complement(4545552..4547339) Roseiflexus sp. RS-1 5210614 YP_001277942.1 CDS RoseRS_3637 NC_009523.1 4548752 4550194 D PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 4548752..4550194 Roseiflexus sp. RS-1 5210615 YP_001277943.1 CDS RoseRS_3638 NC_009523.1 4550286 4551797 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 4550286..4551797 Roseiflexus sp. RS-1 5210616 YP_001277944.1 CDS RoseRS_3639 NC_009523.1 4551825 4554485 D hypothetical protein 4551825..4554485 Roseiflexus sp. RS-1 5210617 YP_001277945.1 CDS RoseRS_3640 NC_009523.1 4554513 4555835 D PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 4554513..4555835 Roseiflexus sp. RS-1 5210618 YP_001277946.1 CDS RoseRS_3641 NC_009523.1 4555846 4557342 D hypothetical protein 4555846..4557342 Roseiflexus sp. RS-1 5210619 YP_001277947.1 CDS RoseRS_3642 NC_009523.1 4557368 4558603 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4557368..4558603 Roseiflexus sp. RS-1 5210620 YP_001277948.1 CDS RoseRS_3643 NC_009523.1 4558607 4559770 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4558607..4559770 Roseiflexus sp. RS-1 5210621 YP_001277949.1 CDS RoseRS_3644 NC_009523.1 4559784 4560437 D PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 4559784..4560437 Roseiflexus sp. RS-1 5210622 YP_001277950.1 CDS RoseRS_3645 NC_009523.1 4560440 4561336 D hypothetical protein 4560440..4561336 Roseiflexus sp. RS-1 5210623 YP_001277951.1 CDS RoseRS_3646 NC_009523.1 4561356 4562021 D PFAM: LmbE family protein; LmbE family protein 4561356..4562021 Roseiflexus sp. RS-1 5210624 YP_001277952.1 CDS RoseRS_3647 NC_009523.1 4562037 4562360 D hypothetical protein 4562037..4562360 Roseiflexus sp. RS-1 5210625 YP_001277953.1 CDS RoseRS_3648 NC_009523.1 4562347 4563906 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4562347..4563906 Roseiflexus sp. RS-1 5210626 YP_001277954.1 CDS RoseRS_3649 NC_009523.1 4563920 4565914 D TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; asparagine synthase 4563920..4565914 Roseiflexus sp. RS-1 5210627 YP_001277955.1 CDS nadE NC_009523.1 4565911 4566948 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 4565911..4566948 Roseiflexus sp. RS-1 5210628 YP_001277956.1 CDS RoseRS_3651 NC_009523.1 4566945 4568036 D hypothetical protein 4566945..4568036 Roseiflexus sp. RS-1 5210629 YP_001277957.1 CDS RoseRS_3652 NC_009523.1 4568123 4569334 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase 4568123..4569334 Roseiflexus sp. RS-1 5210630 YP_001277958.1 CDS RoseRS_3653 NC_009523.1 4569427 4570002 D PFAM: protein of unknown function DUF218; hypothetical protein 4569427..4570002 Roseiflexus sp. RS-1 5210631 YP_001277959.1 CDS RoseRS_3654 NC_009523.1 4570046 4572016 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; polysaccharide biosynthesis protein CapD 4570046..4572016 Roseiflexus sp. RS-1 5210632 YP_001277960.1 CDS RoseRS_3655 NC_009523.1 4572400 4573365 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 4572400..4573365 Roseiflexus sp. RS-1 5210633 YP_001277961.1 CDS RoseRS_3656 NC_009523.1 4574142 4574501 R hypothetical protein complement(4574142..4574501) Roseiflexus sp. RS-1 5210634 YP_001277962.1 CDS RoseRS_3657 NC_009523.1 4574733 4576034 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(4574733..4576034) Roseiflexus sp. RS-1 5210635 YP_001277963.1 CDS RoseRS_3658 NC_009523.1 4576062 4576724 R PFAM: Forkhead-associated protein; transcriptional regulator domain protein; winged helix family two component response transcriptional regulator complement(4576062..4576724) Roseiflexus sp. RS-1 5210636 YP_001277964.1 CDS RoseRS_3659 NC_009523.1 4576892 4578691 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 4576892..4578691 Roseiflexus sp. RS-1 5210637 YP_001277965.1 CDS RoseRS_3660 NC_009523.1 4578722 4582519 R TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor complement(4578722..4582519) Roseiflexus sp. RS-1 5210638 YP_001277966.1 CDS RoseRS_3661 NC_009523.1 4582764 4584383 D TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase, FKBP-type; trigger factor, C-terminal domain protein; trigger factor, N-terminal domain; trigger factor 4582764..4584383 Roseiflexus sp. RS-1 5210639 YP_001277967.1 CDS RoseRS_3662 NC_009523.1 4584387 4585046 D PFAM: peptidase S14, ClpP; endopeptidase Clp 4584387..4585046 Roseiflexus sp. RS-1 5210640 YP_001277968.1 CDS clpX NC_009523.1 4585065 4586375 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 4585065..4586375 Roseiflexus sp. RS-1 5210641 YP_001277969.1 CDS RoseRS_3664 NC_009523.1 4586394 4587290 D TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase, family 2; methylthioadenosine phosphorylase 4586394..4587290 Roseiflexus sp. RS-1 5210642 YP_001277970.1 CDS RoseRS_3665 NC_009523.1 4589322 4590395 R PFAM: beta-lactamase; beta-lactamase complement(4589322..4590395) Roseiflexus sp. RS-1 5210643 YP_001277971.1 CDS RoseRS_3666 NC_009523.1 4590424 4591080 R PFAM: Abortive infection protein; abortive infection protein complement(4590424..4591080) Roseiflexus sp. RS-1 5210644 YP_001277972.1 CDS RoseRS_3667 NC_009523.1 4591091 4591783 R hypothetical protein complement(4591091..4591783) Roseiflexus sp. RS-1 5210645 YP_001277973.1 CDS RoseRS_3668 NC_009523.1 4592216 4592725 R hypothetical protein complement(4592216..4592725) Roseiflexus sp. RS-1 5210646 YP_001277974.1 CDS RoseRS_3669 NC_009523.1 4592747 4593304 R PFAM: UbiA prenyltransferase; UbiA prenyltransferase complement(4592747..4593304) Roseiflexus sp. RS-1 5210647 YP_001277975.1 CDS RoseRS_3670 NC_009523.1 4594743 4599410 D PFAM: TPR repeat-containing protein; Cold-shock protein, DNA-binding; SMART: Tetratricopeptide domain protein; cold-shock protein, DNA-binding 4594743..4599410 Roseiflexus sp. RS-1 5210649 YP_001277976.1 CDS RoseRS_3671 NC_009523.1 4599418 4600932 D hypothetical protein 4599418..4600932 Roseiflexus sp. RS-1 5210650 YP_001277977.1 CDS RoseRS_3672 NC_009523.1 4601143 4601589 R PFAM: UspA domain protein; UspA domain-containing protein complement(4601143..4601589) Roseiflexus sp. RS-1 5210651 YP_001277978.1 CDS RoseRS_3673 NC_009523.1 4601607 4604396 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; HAD superfamily ATPase complement(4601607..4604396) Roseiflexus sp. RS-1 5210652 YP_001277979.1 CDS RoseRS_3674 NC_009523.1 4604416 4604940 R TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH-quinone oxidoreductase subunit E complement(4604416..4604940) Roseiflexus sp. RS-1 5210653 YP_001277980.1 CDS RoseRS_3675 NC_009523.1 4604959 4606212 R TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase I subunit D complement(4604959..4606212) Roseiflexus sp. RS-1 5210654 YP_001277981.1 CDS RoseRS_3676 NC_009523.1 4606219 4606743 R TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C complement(4606219..4606743) Roseiflexus sp. RS-1 5210655 YP_001277982.1 CDS RoseRS_3677 NC_009523.1 4606782 4607285 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(4606782..4607285) Roseiflexus sp. RS-1 5210656 YP_001277983.1 CDS RoseRS_3678 NC_009523.1 4607276 4607632 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 complement(4607276..4607632) Roseiflexus sp. RS-1 5210657 YP_001277984.1 CDS RoseRS_3679 NC_009523.1 4607748 4608275 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(4607748..4608275) Roseiflexus sp. RS-1 5210658 YP_001277985.1 CDS RoseRS_3680 NC_009523.1 4608277 4609533 R TIGRFAM: conserved repeat domain; LPXTG-motif cell wall anchor domain; hypothetical protein complement(4608277..4609533) Roseiflexus sp. RS-1 5210659 YP_001277986.1 CDS RoseRS_3681 NC_009523.1 4609567 4610337 R hypothetical protein complement(4609567..4610337) Roseiflexus sp. RS-1 5210660 YP_001277987.1 CDS RoseRS_3682 NC_009523.1 4610415 4611407 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4610415..4611407) Roseiflexus sp. RS-1 5210661 YP_001277988.1 CDS RoseRS_3683 NC_009523.1 4611489 4611947 D hypothetical protein 4611489..4611947 Roseiflexus sp. RS-1 5210662 YP_001277989.1 CDS RoseRS_3684 NC_009523.1 4612005 4612451 R PFAM: Septum formation initiator; septum formation initiator complement(4612005..4612451) Roseiflexus sp. RS-1 5210663 YP_001277990.1 CDS RoseRS_3685 NC_009523.1 4612542 4612973 R PFAM: protein of unknown function DUF583; hypothetical protein complement(4612542..4612973) Roseiflexus sp. RS-1 5210664 YP_001277991.1 CDS RoseRS_3686 NC_009523.1 4613108 4613950 R TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase complement(4613108..4613950) Roseiflexus sp. RS-1 5210665 YP_001277992.1 CDS RoseRS_3687 NC_009523.1 4614109 4614534 D PFAM: carbonic anhydrase; carbonic anhydrase 4614109..4614534 Roseiflexus sp. RS-1 5210666 YP_001277993.1 CDS RoseRS_3688 NC_009523.1 4614811 4615041 R PFAM: protein of unknown function UPF0150; hypothetical protein complement(4614811..4615041) Roseiflexus sp. RS-1 5210667 YP_001277994.1 CDS RoseRS_3689 NC_009523.1 4615612 4615956 R PFAM: protein of unknown function DUF86; hypothetical protein complement(4615612..4615956) Roseiflexus sp. RS-1 5210668 YP_001277995.1 CDS RoseRS_3690 NC_009523.1 4616029 4616853 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(4616029..4616853) Roseiflexus sp. RS-1 5210669 YP_001277996.1 CDS RoseRS_3691 NC_009523.1 4616890 4617831 R hypothetical protein complement(4616890..4617831) Roseiflexus sp. RS-1 5210670 YP_001277997.1 CDS RoseRS_3692 NC_009523.1 4618504 4619634 R TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta complement(4618504..4619634) Roseiflexus sp. RS-1 5210671 YP_001277998.1 CDS RoseRS_3693 NC_009523.1 4619650 4620111 R PFAM: biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein complement(4619650..4620111) Roseiflexus sp. RS-1 5210672 YP_001277999.1 CDS RoseRS_3694 NC_009523.1 4620108 4620452 R hypothetical protein complement(4620108..4620452) Roseiflexus sp. RS-1 5210673 YP_001278000.1 CDS RoseRS_3695 NC_009523.1 4620591 4622207 R PFAM: carboxyl transferase; carboxyl transferase complement(4620591..4622207) Roseiflexus sp. RS-1 5210674 YP_001278001.1 CDS RoseRS_3696 NC_009523.1 4622343 4623248 D PFAM: PfkB domain protein; ribokinase-like domain-containing protein 4622343..4623248 Roseiflexus sp. RS-1 5210675 YP_001278002.1 CDS RoseRS_3697 NC_009523.1 4623295 4623819 R PFAM: membrane-flanked domain; membrane-flanked domain-containing protein complement(4623295..4623819) Roseiflexus sp. RS-1 5210676 YP_001278003.1 CDS RoseRS_3698 NC_009523.1 4623838 4625085 R PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; nucleotidyl transferase complement(4623838..4625085) Roseiflexus sp. RS-1 5210677 YP_001278004.1 CDS RoseRS_3699 NC_009523.1 4625094 4626347 R TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase complement(4625094..4626347) Roseiflexus sp. RS-1 5210678 YP_001278005.1 CDS RoseRS_3700 NC_009523.1 4626519 4627295 R TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase; histidinol-phosphate phosphatase complement(4626519..4627295) Roseiflexus sp. RS-1 5210679 YP_001278006.1 CDS RoseRS_3701 NC_009523.1 4627465 4628868 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 4627465..4628868 Roseiflexus sp. RS-1 5210680 YP_001278007.1 CDS RoseRS_3703 NC_009523.1 4630801 4631763 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 4630801..4631763 Roseiflexus sp. RS-1 5210682 YP_001278008.1 CDS RoseRS_3704 NC_009523.1 4631878 4633602 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(4631878..4633602) Roseiflexus sp. RS-1 5210683 YP_001278009.1 CDS RoseRS_3705 NC_009523.1 4633732 4635744 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(4633732..4635744) Roseiflexus sp. RS-1 5210684 YP_001278010.1 CDS RoseRS_3706 NC_009523.1 4637360 4640617 D TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; DNA mismatch repair protein MutS 4637360..4640617 Roseiflexus sp. RS-1 5210685 YP_001278011.1 CDS RoseRS_3707 NC_009523.1 4640624 4641103 R PFAM: Isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase complement(4640624..4641103) Roseiflexus sp. RS-1 5210686 YP_001278012.1 CDS RoseRS_3708 NC_009523.1 4641221 4642195 D PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; glycine cleavage T protein (aminomethyl transferase) 4641221..4642195 Roseiflexus sp. RS-1 5210687 YP_001278013.1 CDS RoseRS_3709 NC_009523.1 4642221 4643180 R PFAM: protein of unknown function DUF820; hypothetical protein complement(4642221..4643180) Roseiflexus sp. RS-1 5210688 YP_001278014.1 CDS RoseRS_3710 NC_009523.1 4643248 4644240 R PFAM: protein of unknown function DUF820; hypothetical protein complement(4643248..4644240) Roseiflexus sp. RS-1 5210689 YP_001278015.1 CDS RoseRS_3711 NC_009523.1 4644335 4645333 R PFAM: protein of unknown function DUF820; hypothetical protein complement(4644335..4645333) Roseiflexus sp. RS-1 5210690 YP_001278016.1 CDS RoseRS_3712 NC_009523.1 4645407 4647200 R hypothetical protein complement(4645407..4647200) Roseiflexus sp. RS-1 5210691 YP_001278017.1 CDS RoseRS_3713 NC_009523.1 4647346 4649151 R hypothetical protein complement(4647346..4649151) Roseiflexus sp. RS-1 5210692 YP_001278018.1 CDS RoseRS_3714 NC_009523.1 4649284 4650453 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; 2-alkenal reductase complement(4649284..4650453) Roseiflexus sp. RS-1 5210693 YP_001278019.1 CDS RoseRS_3715 NC_009523.1 4650665 4651903 R PFAM: protein of unknown function UPF0118; hypothetical protein complement(4650665..4651903) Roseiflexus sp. RS-1 5210694 YP_001278020.1 CDS RoseRS_3716 NC_009523.1 4651993 4652595 R TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; 2'-5' RNA ligase complement(4651993..4652595) Roseiflexus sp. RS-1 5210695 YP_001278021.1 CDS RoseRS_3717 NC_009523.1 4652856 4654982 R PFAM: Polyphosphate kinase; polyphosphate kinase complement(4652856..4654982) Roseiflexus sp. RS-1 5210696 YP_001278022.1 CDS RoseRS_3718 NC_009523.1 4656143 4656769 R PFAM: protein of unknown function DUF1405; hypothetical protein complement(4656143..4656769) Roseiflexus sp. RS-1 5210699 YP_001278023.1 CDS RoseRS_3719 NC_009523.1 4657043 4657618 R PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase complement(4657043..4657618) Roseiflexus sp. RS-1 5210700 YP_001278024.1 CDS RoseRS_3720 NC_009523.1 4657679 4658170 R PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; peptidyl-prolyl isomerase complement(4657679..4658170) Roseiflexus sp. RS-1 5210701 YP_001278025.1 CDS RoseRS_3721 NC_009523.1 4658274 4658657 R hypothetical protein complement(4658274..4658657) Roseiflexus sp. RS-1 5210702 YP_001278026.1 CDS RoseRS_3722 NC_009523.1 4658678 4660618 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase complement(4658678..4660618) Roseiflexus sp. RS-1 5210703 YP_001278027.1 CDS RoseRS_3723 NC_009523.1 4660830 4661663 D Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase 4660830..4661663 Roseiflexus sp. RS-1 5210704 YP_001278028.1 CDS RoseRS_3724 NC_009523.1 4661904 4662773 D hypothetical protein 4661904..4662773 Roseiflexus sp. RS-1 5210705 YP_001278029.1 CDS RoseRS_3725 NC_009523.1 4662876 4663487 D hypothetical protein 4662876..4663487 Roseiflexus sp. RS-1 5210706 YP_001278030.1 CDS RoseRS_3726 NC_009523.1 4663491 4664066 R hypothetical protein complement(4663491..4664066) Roseiflexus sp. RS-1 5210707 YP_001278031.1 CDS RoseRS_3727 NC_009523.1 4664228 4664731 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 4664228..4664731 Roseiflexus sp. RS-1 5210708 YP_001278032.1 CDS RoseRS_3728 NC_009523.1 4664922 4665656 R PFAM: peptidase C60, sortase A and B; peptidase C60, sortase A and B complement(4664922..4665656) Roseiflexus sp. RS-1 5210709 YP_001278033.1 CDS RoseRS_3729 NC_009523.1 4665908 4667089 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4665908..4667089 Roseiflexus sp. RS-1 5210710 YP_001278034.1 CDS RoseRS_3730 NC_009523.1 4667114 4668742 R TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(4667114..4668742) Roseiflexus sp. RS-1 5210711 YP_001278035.1 CDS RoseRS_3731 NC_009523.1 4668889 4669392 D hypothetical protein 4668889..4669392 Roseiflexus sp. RS-1 5210712 YP_001278036.1 CDS RoseRS_3732 NC_009523.1 4669405 4670262 D PFAM: amidohydrolase 2; amidohydrolase 2 4669405..4670262 Roseiflexus sp. RS-1 5210713 YP_001278037.1 CDS RoseRS_3733 NC_009523.1 4670298 4671293 D hypothetical protein 4670298..4671293 Roseiflexus sp. RS-1 5210714 YP_001278038.1 CDS RoseRS_3734 NC_009523.1 4671290 4672825 D PFAM: glycoside hydrolase, family 57; glycoside hydrolase family protein 4671290..4672825 Roseiflexus sp. RS-1 5210715 YP_001278039.1 CDS RoseRS_3735 NC_009523.1 4673073 4673414 R PFAM: Rhodanese domain protein; rhodanese domain-containing protein complement(4673073..4673414) Roseiflexus sp. RS-1 5210716 YP_001278040.1 CDS RoseRS_3736 NC_009523.1 4673443 4674894 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(4673443..4674894) Roseiflexus sp. RS-1 5210717 YP_001278041.1 CDS RoseRS_3737 NC_009523.1 4674891 4675586 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(4674891..4675586) Roseiflexus sp. RS-1 5210718 YP_001278042.1 CDS RoseRS_3738 NC_009523.1 4675742 4676302 R hypothetical protein complement(4675742..4676302) Roseiflexus sp. RS-1 5210719 YP_001278043.1 CDS RoseRS_3739 NC_009523.1 4676753 4679143 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4676753..4679143 Roseiflexus sp. RS-1 5210721 YP_001278044.1 CDS RoseRS_3740 NC_009523.1 4679200 4679892 R PFAM: peptidase, membrane zinc metallopeptidase, putative; peptidase, membrane zinc metallopeptidase complement(4679200..4679892) Roseiflexus sp. RS-1 5210722 YP_001278045.1 CDS RoseRS_3741 NC_009523.1 4680046 4681617 R PFAM: ABC-2 type transporter; ABC-2 type transporter complement(4680046..4681617) Roseiflexus sp. RS-1 5210723 YP_001278046.1 CDS RoseRS_3742 NC_009523.1 4681610 4682629 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4681610..4682629) Roseiflexus sp. RS-1 5210724 YP_001278047.1 CDS RoseRS_3743 NC_009523.1 4682870 4684270 D TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase, class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 4682870..4684270 Roseiflexus sp. RS-1 5210725 YP_001278048.1 CDS RoseRS_3744 NC_009523.1 4684449 4685465 D rRNA methylase-like protein 4684449..4685465 Roseiflexus sp. RS-1 5210726 YP_001278049.1 CDS RoseRS_3745 NC_009523.1 4685462 4686451 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 4685462..4686451 Roseiflexus sp. RS-1 5210727 YP_001278050.1 CDS RoseRS_3746 NC_009523.1 4686485 4687450 D PFAM: protein of unknown function DUF820; hypothetical protein 4686485..4687450 Roseiflexus sp. RS-1 5210728 YP_001278051.1 CDS RoseRS_3747 NC_009523.1 4687791 4688456 D PFAM: Abortive infection protein; abortive infection protein 4687791..4688456 Roseiflexus sp. RS-1 5210729 YP_001278052.1 CDS RoseRS_3748 NC_009523.1 4688512 4690029 R TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; SMART: AAA ATPase; Mg chelatase subunit ChlI complement(4688512..4690029) Roseiflexus sp. RS-1 5210730 YP_001278053.1 CDS RoseRS_3749 NC_009523.1 4690549 4691877 D TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH, type 1, domain protein; NusA N-terminal domain protein; SMART: KH domain protein; NusA antitermination factor 4690549..4691877 Roseiflexus sp. RS-1 5210731 YP_001278054.1 CDS RoseRS_3750 NC_009523.1 4691890 4692246 D PFAM: protein of unknown function DUF448; hypothetical protein 4691890..4692246 Roseiflexus sp. RS-1 5210732 YP_001278055.1 CDS infB NC_009523.1 4692347 4694536 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 4692347..4694536 Roseiflexus sp. RS-1 5210733 YP_001278056.1 CDS RoseRS_3752 NC_009523.1 4694533 4694925 D PFAM: ribosome-binding factor A; ribosome-binding factor A 4694533..4694925 Roseiflexus sp. RS-1 5210734 YP_001278057.1 CDS RoseRS_3753 NC_009523.1 4694968 4695564 D PFAM: methyltransferase small; methyltransferase small 4694968..4695564 Roseiflexus sp. RS-1 5210735 YP_001278058.1 CDS RoseRS_3754 NC_009523.1 4695561 4696562 D PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; phosphoesterase domain-containing protein 4695561..4696562 Roseiflexus sp. RS-1 5210736 YP_001278059.1 CDS RoseRS_3755 NC_009523.1 4696577 4697479 D TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B 4696577..4697479 Roseiflexus sp. RS-1 5210737 YP_001278060.1 CDS RoseRS_3756 NC_009523.1 4697476 4698408 D TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; riboflavin biosynthesis protein RibF 4697476..4698408 Roseiflexus sp. RS-1 5210738 YP_001278061.1 CDS RoseRS_3757 NC_009523.1 4698433 4699677 D PFAM: protein of unknown function DUF214; hypothetical protein 4698433..4699677 Roseiflexus sp. RS-1 5210739 YP_001278062.1 CDS RoseRS_3758 NC_009523.1 4700174 4700488 R hypothetical protein complement(4700174..4700488) Roseiflexus sp. RS-1 5210740 YP_001278063.1 CDS RoseRS_3759 NC_009523.1 4700557 4702056 R hypothetical protein complement(4700557..4702056) Roseiflexus sp. RS-1 5210741 YP_001278064.1 CDS RoseRS_3760 NC_009523.1 4702067 4703680 R hypothetical protein complement(4702067..4703680) Roseiflexus sp. RS-1 5210742 YP_001278065.1 CDS RoseRS_3761 NC_009523.1 4703814 4704569 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4703814..4704569 Roseiflexus sp. RS-1 5210743 YP_001278066.1 CDS RoseRS_3762 NC_009523.1 4704645 4705721 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; histidine kinase 4704645..4705721 Roseiflexus sp. RS-1 5210744 YP_001278067.1 CDS RoseRS_3763 NC_009523.1 4705950 4706282 R hypothetical protein complement(4705950..4706282) Roseiflexus sp. RS-1 5210745 YP_001278068.1 CDS RoseRS_3764 NC_009523.1 4707971 4708669 R PFAM: Haloacid dehalogenase domain protein hydrolase; hydrolase complement(4707971..4708669) Roseiflexus sp. RS-1 5210746 YP_001278069.1 CDS RoseRS_3765 NC_009523.1 4708666 4709448 R hypothetical protein complement(4708666..4709448) Roseiflexus sp. RS-1 5210747 YP_001278070.1 CDS RoseRS_3766 NC_009523.1 4709582 4709980 R putative anti-sigma regulatory factor complement(4709582..4709980) Roseiflexus sp. RS-1 5210748 YP_001278071.1 CDS RoseRS_3767 NC_009523.1 4710024 4710377 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(4710024..4710377) Roseiflexus sp. RS-1 5210749 YP_001278072.1 CDS RoseRS_3768 NC_009523.1 4710506 4712539 R PFAM: glycosyl transferase, family 2; cellulose synthase complement(4710506..4712539) Roseiflexus sp. RS-1 5210750 YP_001278073.1 CDS RoseRS_3769 NC_009523.1 4712536 4714692 R hypothetical protein complement(4712536..4714692) Roseiflexus sp. RS-1 5210751 YP_001278074.1 CDS RoseRS_3770 NC_009523.1 4714753 4715928 R PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; response regulator receiver protein complement(4714753..4715928) Roseiflexus sp. RS-1 5210752 YP_001278075.1 CDS RoseRS_3771 NC_009523.1 4715921 4719040 R TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(4715921..4719040) Roseiflexus sp. RS-1 5210753 YP_001278076.1 CDS ruvA NC_009523.1 4719198 4719791 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(4719198..4719791) Roseiflexus sp. RS-1 5210754 YP_001278077.1 CDS RoseRS_3773 NC_009523.1 4719788 4720273 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(4719788..4720273) Roseiflexus sp. RS-1 5210755 YP_001278078.1 CDS RoseRS_3774 NC_009523.1 4720320 4722977 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase complement(4720320..4722977) Roseiflexus sp. RS-1 5210756 YP_001278079.1 CDS RoseRS_3775 NC_009523.1 4723134 4724300 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 4723134..4724300 Roseiflexus sp. RS-1 5210757 YP_001278080.1 CDS RoseRS_3776 NC_009523.1 4724393 4726057 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap complement(4724393..4726057) Roseiflexus sp. RS-1 5210758 YP_001278081.1 CDS RoseRS_3777 NC_009523.1 4726576 4727007 D TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; MraZ protein 4726576..4727007 Roseiflexus sp. RS-1 5210759 YP_001278082.1 CDS mraW NC_009523.1 4727083 4728024 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 4727083..4728024 Roseiflexus sp. RS-1 5210760 YP_001278083.1 CDS RoseRS_3779 NC_009523.1 4728070 4728474 D hypothetical protein 4728070..4728474 Roseiflexus sp. RS-1 5210761 YP_001278084.1 CDS RoseRS_3780 NC_009523.1 4728487 4730343 D PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase 4728487..4730343 Roseiflexus sp. RS-1 5210762 YP_001278085.1 CDS RoseRS_3781 NC_009523.1 4730423 4731895 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 4730423..4731895 Roseiflexus sp. RS-1 5210763 YP_001278086.1 CDS mraY NC_009523.1 4731961 4733052 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 4731961..4733052 Roseiflexus sp. RS-1 5210764 YP_001278087.1 CDS RoseRS_3783 NC_009523.1 4733059 4734459 D TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase 4733059..4734459 Roseiflexus sp. RS-1 5210765 YP_001278088.1 CDS RoseRS_3784 NC_009523.1 4734456 4735307 D PFAM: Rhomboid family protein; rhomboid family protein 4734456..4735307 Roseiflexus sp. RS-1 5210766 YP_001278089.1 CDS RoseRS_3785 NC_009523.1 4735391 4736662 D TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; cell division protein FtsW 4735391..4736662 Roseiflexus sp. RS-1 5210767 YP_001278090.1 CDS RoseRS_3786 NC_009523.1 4736514 4737833 D PFAM: glycosyl transferase, family 28; Glycosyltransferase 28, C-terminal domain; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4736514..4737833 Roseiflexus sp. RS-1 5210768 YP_001278091.1 CDS RoseRS_3787 NC_009523.1 4737830 4738492 D hypothetical protein 4737830..4738492 Roseiflexus sp. RS-1 5210769 YP_001278092.1 CDS RoseRS_3788 NC_009523.1 4738511 4739917 D TIGRFAM: UDP-N-acetylmuramate--alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramate--L-alanine ligase 4738511..4739917 Roseiflexus sp. RS-1 5210770 YP_001278093.1 CDS RoseRS_3789 NC_009523.1 4739925 4741202 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 4739925..4741202 Roseiflexus sp. RS-1 5210771 YP_001278094.1 CDS RoseRS_3790 NC_009523.1 4741207 4742094 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 4741207..4742094 Roseiflexus sp. RS-1 5210772 YP_001278095.1 CDS RoseRS_3791 NC_009523.1 4742126 4743238 D TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 4742126..4743238 Roseiflexus sp. RS-1 5210773 YP_001278096.1 CDS RoseRS_3792 NC_009523.1 4743235 4744068 D PFAM: Polypeptide-transport-associated domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein 4743235..4744068 Roseiflexus sp. RS-1 5210774 YP_001278097.1 CDS RoseRS_3793 NC_009523.1 4744071 4745318 D PFAM: cell division protein FtsA; cell division protein FtsA 4744071..4745318 Roseiflexus sp. RS-1 5210775 YP_001278098.1 CDS RoseRS_3794 NC_009523.1 4745345 4746520 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; cell division protein FtsZ 4745345..4746520 Roseiflexus sp. RS-1 5210776 YP_001278099.1 CDS RoseRS_3795 NC_009523.1 4746525 4747277 R TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase complement(4746525..4747277) Roseiflexus sp. RS-1 5210777 YP_001278100.1 CDS RoseRS_3796 NC_009523.1 4747554 4750121 R hypothetical protein complement(4747554..4750121) Roseiflexus sp. RS-1 5210778 YP_001278101.1 CDS RoseRS_3797 NC_009523.1 4750319 4751704 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 4750319..4751704 Roseiflexus sp. RS-1 5210779 YP_001278102.1 CDS RoseRS_3798 NC_009523.1 4751807 4752601 R hypothetical protein complement(4751807..4752601) Roseiflexus sp. RS-1 5210780 YP_001278103.1 CDS RoseRS_3799 NC_009523.1 4752863 4753657 R hypothetical protein complement(4752863..4753657) Roseiflexus sp. RS-1 5210781 YP_001278104.1 CDS RoseRS_3800 NC_009523.1 4753901 4755193 D TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein 4753901..4755193 Roseiflexus sp. RS-1 5210782 YP_001278105.1 CDS RoseRS_3801 NC_009523.1 4755190 4756158 R PFAM: protein of unknown function DUF95, transmembrane; hypothetical protein complement(4755190..4756158) Roseiflexus sp. RS-1 5210783 YP_001278106.1 CDS RoseRS_3802 NC_009523.1 4756349 4757410 R PFAM: mannose-6-phosphate isomerase, type I; mannose-6-phosphate isomerase complement(4756349..4757410) Roseiflexus sp. RS-1 5210784 YP_001278107.1 CDS RoseRS_3803 NC_009523.1 4757846 4758808 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 4757846..4758808 Roseiflexus sp. RS-1 5210785 YP_001278108.1 CDS RoseRS_3804 NC_009523.1 4758847 4759428 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(4758847..4759428) Roseiflexus sp. RS-1 5210786 YP_001278109.1 CDS RoseRS_3805 NC_009523.1 4759434 4760474 R PFAM: histone deacetylase superfamily; histone deacetylase superfamily protein complement(4759434..4760474) Roseiflexus sp. RS-1 5210787 YP_001278110.1 CDS RoseRS_3806 NC_009523.1 4760554 4760814 D PFAM: Transglycosylase-associated protein; transglycosylase-associated protein 4760554..4760814 Roseiflexus sp. RS-1 5210788 YP_001278111.1 CDS RoseRS_3807 NC_009523.1 4761650 4763167 D PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; recombination factor protein RarA 4761650..4763167 Roseiflexus sp. RS-1 5210789 YP_001278112.1 CDS RoseRS_3808 NC_009523.1 4763192 4764349 D PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase 4763192..4764349 Roseiflexus sp. RS-1 5210790 YP_001278113.1 CDS RoseRS_3809 NC_009523.1 4764346 4764957 R PFAM: protein of unknown function DUF205; hypothetical protein complement(4764346..4764957) Roseiflexus sp. RS-1 5210791 YP_001278114.1 CDS RoseRS_3810 NC_009523.1 4765273 4765839 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(4765273..4765839) Roseiflexus sp. RS-1 5210792 YP_001278115.1 CDS RoseRS_3811 NC_009523.1 4765981 4766637 D TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 4765981..4766637 Roseiflexus sp. RS-1 5210793 YP_001278116.1 CDS RoseRS_3812 NC_009523.1 4766662 4767336 D PFAM: peptidase M50; peptidase M50 4766662..4767336 Roseiflexus sp. RS-1 5210794 YP_001278117.1 CDS tpiA NC_009523.1 4767347 4768111 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 4767347..4768111 Roseiflexus sp. RS-1 5210795 YP_001278118.1 CDS RoseRS_3814 NC_009523.1 4769487 4769870 R PFAM: response regulator receiver; response regulator receiver protein complement(4769487..4769870) Roseiflexus sp. RS-1 5210796 YP_001278119.1 CDS RoseRS_3815 NC_009523.1 4770229 4772580 D TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 4770229..4772580 Roseiflexus sp. RS-1 5210797 YP_001278120.1 CDS RoseRS_3816 NC_009523.1 4773117 4775510 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS/PAC sensor-containing diguanylate cyclase complement(4773117..4775510) Roseiflexus sp. RS-1 5210798 YP_001278121.1 CDS RoseRS_3817 NC_009523.1 4775600 4776778 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(4775600..4776778) Roseiflexus sp. RS-1 5210799 YP_001278122.1 CDS RoseRS_3818 NC_009523.1 4776811 4777503 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(4776811..4777503) Roseiflexus sp. RS-1 5210800 YP_001278123.1 CDS RoseRS_3819 NC_009523.1 4777593 4778768 R TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; galactokinase complement(4777593..4778768) Roseiflexus sp. RS-1 5210801 YP_001278124.1 CDS RoseRS_3820 NC_009523.1 4779003 4781240 D hypothetical protein 4779003..4781240 Roseiflexus sp. RS-1 5210802 YP_001278125.1 CDS RoseRS_3821 NC_009523.1 4781405 4784266 D hypothetical protein 4781405..4784266 Roseiflexus sp. RS-1 5210803 YP_001278126.1 CDS RoseRS_3822 NC_009523.1 4784275 4785150 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4784275..4785150) Roseiflexus sp. RS-1 5210804 YP_001278127.1 CDS RoseRS_3823 NC_009523.1 4785274 4785558 D hypothetical protein 4785274..4785558 Roseiflexus sp. RS-1 5210805 YP_001278128.1 CDS RoseRS_3824 NC_009523.1 4785548 4785787 D hypothetical protein 4785548..4785787 Roseiflexus sp. RS-1 5210806 YP_001278129.1 CDS RoseRS_3825 NC_009523.1 4786026 4786796 R PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(4786026..4786796) Roseiflexus sp. RS-1 5210807 YP_001278130.1 CDS RoseRS_3826 NC_009523.1 4786793 4787458 R hypothetical protein complement(4786793..4787458) Roseiflexus sp. RS-1 5210808 YP_001278131.1 CDS RoseRS_3827 NC_009523.1 4787469 4789076 R PFAM: carboxyl transferase; propionyl-CoA carboxylase complement(4787469..4789076) Roseiflexus sp. RS-1 5210809 YP_001278132.1 CDS RoseRS_3828 NC_009523.1 4789063 4790088 R TIGRFAM: galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase complement(4789063..4790088) Roseiflexus sp. RS-1 5210810 YP_001278133.1 CDS RoseRS_3829 NC_009523.1 4790123 4790710 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(4790123..4790710) Roseiflexus sp. RS-1 5210811 YP_001278134.1 CDS RoseRS_3830 NC_009523.1 4790715 4791455 R hypothetical protein complement(4790715..4791455) Roseiflexus sp. RS-1 5210812 YP_001278135.1 CDS RoseRS_3831 NC_009523.1 4791452 4792162 R PFAM: ABC-2 type transporter; ABC-2 type transporter complement(4791452..4792162) Roseiflexus sp. RS-1 5210813 YP_001278136.1 CDS RoseRS_3832 NC_009523.1 4792159 4793010 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4792159..4793010) Roseiflexus sp. RS-1 5210814 YP_001278137.1 CDS RoseRS_3833 NC_009523.1 4793072 4794129 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(4793072..4793602,4793602..4794129) Roseiflexus sp. RS-1 5210815 YP_001278138.1 CDS RoseRS_3834 NC_009523.1 4794143 4794793 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(4794143..4794793) Roseiflexus sp. RS-1 5210816 YP_001278139.1 CDS RoseRS_3835 NC_009523.1 4794797 4795003 R hypothetical protein complement(4794797..4795003) Roseiflexus sp. RS-1 5210817 YP_001278140.1 CDS RoseRS_3836 NC_009523.1 4795349 4796182 R catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase complement(4795349..4796182) Roseiflexus sp. RS-1 5210818 YP_001278141.1 CDS RoseRS_3837 NC_009523.1 4796610 4797110 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4796610..4797110 Roseiflexus sp. RS-1 5210819 YP_001278142.1 CDS RoseRS_3838 NC_009523.1 4797252 4798061 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4797252..4798061 Roseiflexus sp. RS-1 5210820 YP_001278143.1 CDS RoseRS_3839 NC_009523.1 4798103 4799083 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(4798103..4799083) Roseiflexus sp. RS-1 5210821 YP_001278144.1 CDS RoseRS_3840 NC_009523.1 4799080 4800813 R PFAM: penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase complement(4799080..4800813) Roseiflexus sp. RS-1 5210822 YP_001278145.1 CDS RoseRS_3841 NC_009523.1 4801309 4801638 D hypothetical protein 4801309..4801638 Roseiflexus sp. RS-1 5210823 YP_001278146.1 CDS RoseRS_3842 NC_009523.1 4801728 4802111 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(4801728..4802111) Roseiflexus sp. RS-1 5210824 YP_001278147.1 CDS RoseRS_3843 NC_009523.1 4802205 4802645 R hypothetical protein complement(4802205..4802645) Roseiflexus sp. RS-1 5210825 YP_001278148.1 CDS RoseRS_3844 NC_009523.1 4802788 4804119 R PFAM: cell cycle protein; cell cycle protein complement(4802788..4804119) Roseiflexus sp. RS-1 5210826 YP_001278149.1 CDS RoseRS_3845 NC_009523.1 4804129 4805724 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase complement(4804129..4805724) Roseiflexus sp. RS-1 5210827 YP_001278150.1 CDS RoseRS_3846 NC_009523.1 4805845 4806210 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 4805845..4806210 Roseiflexus sp. RS-1 5210828 YP_001278151.1 CDS RoseRS_3847 NC_009523.1 4806197 4806580 D PFAM: HEPN domain protein; HEPN domain-containing protein 4806197..4806580 Roseiflexus sp. RS-1 5210829 YP_001278152.1 CDS RoseRS_3848 NC_009523.1 4806619 4809546 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A complement(4806619..4809546) Roseiflexus sp. RS-1 5210830 YP_001278153.1 CDS RoseRS_3849 NC_009523.1 4809616 4809918 R nitrogen regulatory protein P-II complement(4809616..4809918) Roseiflexus sp. RS-1 5210831 YP_001278154.1 CDS RoseRS_3851 NC_009523.1 4811094 4812473 R PFAM: transcriptional regulator domain protein; winged helix family two component response transcriptional regulator complement(4811094..4812473) Roseiflexus sp. RS-1 5210833 YP_001278155.1 CDS RoseRS_3852 NC_009523.1 4812525 4812896 R hypothetical protein complement(4812525..4812896) Roseiflexus sp. RS-1 5210834 YP_001278156.1 CDS RoseRS_3853 NC_009523.1 4812903 4815419 R hypothetical protein complement(4812903..4815419) Roseiflexus sp. RS-1 5210835 YP_001278157.1 CDS RoseRS_3854 NC_009523.1 4815451 4817037 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) complement(4815451..4817037) Roseiflexus sp. RS-1 5210836 YP_001278158.1 CDS RoseRS_3855 NC_009523.1 4817373 4818473 D PFAM: band 7 protein; hypothetical protein 4817373..4818473 Roseiflexus sp. RS-1 5210837 YP_001278159.1 CDS RoseRS_3856 NC_009523.1 4818479 4818772 D hypothetical protein 4818479..4818772 Roseiflexus sp. RS-1 5210838 YP_001278160.1 CDS RoseRS_3857 NC_009523.1 4819348 4821192 R PFAM: amino acid permease-associated region; amino acid permease-associated protein complement(4819348..4821192) Roseiflexus sp. RS-1 5210839 YP_001278161.1 CDS RoseRS_3858 NC_009523.1 4821459 4824395 R PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein complement(4821459..4824395) Roseiflexus sp. RS-1 5210840 YP_001278162.1 CDS RoseRS_3859 NC_009523.1 4824504 4826018 R PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(4824504..4826018) Roseiflexus sp. RS-1 5210841 YP_001278163.1 CDS RoseRS_3860 NC_009523.1 4826158 4827348 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase 4826158..4827348 Roseiflexus sp. RS-1 5210842 YP_001278164.1 CDS RoseRS_3861 NC_009523.1 4827369 4827857 D hypothetical protein 4827369..4827857 Roseiflexus sp. RS-1 5210843 YP_001278165.1 CDS RoseRS_3862 NC_009523.1 4827857 4828660 D TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; hemolysin A 4827857..4828660 Roseiflexus sp. RS-1 5210844 YP_001278166.1 CDS RoseRS_3863 NC_009523.1 4828721 4833847 R PFAM: Laminin G, sub domain 2; SMART: Laminin G; LamG domain protein jellyroll fold domain protein; laminin G, domain-containing 2 complement(4828721..4833847) Roseiflexus sp. RS-1 5210845 YP_001278167.1 CDS RoseRS_3864 NC_009523.1 4834115 4835164 D PFAM: alanine racemase domain protein; alanine racemase domain-containing protein 4834115..4835164 Roseiflexus sp. RS-1 5210846 YP_001278168.1 CDS RoseRS_3865 NC_009523.1 4835344 4835871 R PFAM: OsmC family protein; OsmC family protein complement(4835344..4835871) Roseiflexus sp. RS-1 5210847 YP_001278169.1 CDS RoseRS_3866 NC_009523.1 4835883 4836170 D hypothetical protein 4835883..4836170 Roseiflexus sp. RS-1 5210848 YP_001278170.1 CDS RoseRS_3867 NC_009523.1 4836494 4838698 R hypothetical protein complement(4836494..4838698) Roseiflexus sp. RS-1 5210849 YP_001278171.1 CDS RoseRS_3868 NC_009523.1 4838706 4839824 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; glutamine--scyllo-inositol transaminase complement(4838706..4839824) Roseiflexus sp. RS-1 5210850 YP_001278172.1 CDS RoseRS_3869 NC_009523.1 4839856 4840863 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(4839856..4840863) Roseiflexus sp. RS-1 5210851 YP_001278173.1 CDS RoseRS_3870 NC_009523.1 4840909 4841682 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4840909..4841682) Roseiflexus sp. RS-1 5210852 YP_001278174.1 CDS RoseRS_3871 NC_009523.1 4841999 4845478 D PFAM: Laminin G, sub domain 2; SMART: Laminin G; LamG domain protein jellyroll fold domain protein; laminin G, domain-containing 2 4841999..4845478 Roseiflexus sp. RS-1 5210853 YP_001278175.1 CDS RoseRS_3872 NC_009523.1 4845569 4846681 D TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; histidinol-phosphate aminotransferase 4845569..4846681 Roseiflexus sp. RS-1 5210854 YP_001278176.1 CDS RoseRS_3873 NC_009523.1 4847203 4848195 R PFAM: protein of unknown function DUF368; hypothetical protein complement(4847203..4848195) Roseiflexus sp. RS-1 5210855 YP_001278177.1 CDS RoseRS_3874 NC_009523.1 4848672 4849634 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 4848672..4849634 Roseiflexus sp. RS-1 5210856 YP_001278178.1 CDS RoseRS_3875 NC_009523.1 4850074 4851294 R TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase complement(4850074..4851294) Roseiflexus sp. RS-1 5210857 YP_001278179.1 CDS RoseRS_3876 NC_009523.1 4851486 4854554 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; CHASE4 domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 4851486..4854554 Roseiflexus sp. RS-1 5210858 YP_001278180.1 CDS RoseRS_3877 NC_009523.1 4854559 4854951 D PFAM: response regulator receiver; response regulator receiver protein 4854559..4854951 Roseiflexus sp. RS-1 5210859 YP_001278181.1 CDS RoseRS_3878 NC_009523.1 4855015 4857693 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4855015..4857693 Roseiflexus sp. RS-1 5210860 YP_001278182.1 CDS RoseRS_3879 NC_009523.1 4858248 4859168 D hypothetical protein 4858248..4859168 Roseiflexus sp. RS-1 5210861 YP_001278183.1 CDS RoseRS_3880 NC_009523.1 4859271 4860435 R hypothetical protein complement(join(4859271..4860167,4860169..4860435)) Roseiflexus sp. RS-1 5210862 YP_001278184.1 CDS RoseRS_3881 NC_009523.1 4861085 4861474 R hypothetical protein complement(4861085..4861474) Roseiflexus sp. RS-1 5210863 YP_001278185.1 CDS RoseRS_3882 NC_009523.1 4861671 4862633 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 4861671..4862633 Roseiflexus sp. RS-1 5210864 YP_001278186.1 CDS RoseRS_3883 NC_009523.1 4862728 4863756 D PFAM: peptidase M19, renal dipeptidase; membrane dipeptidase 4862728..4863756 Roseiflexus sp. RS-1 5210865 YP_001278187.1 CDS RoseRS_3884 NC_009523.1 4863890 4864612 D PFAM: Nucleotidyl transferase; nucleotidyl transferase 4863890..4864612 Roseiflexus sp. RS-1 5210866 YP_001278188.1 CDS RoseRS_3885 NC_009523.1 4865159 4866685 R hypothetical protein complement(4865159..4866685) Roseiflexus sp. RS-1 5210867 YP_001278189.1 CDS RoseRS_3886 NC_009523.1 4866856 4868250 D PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 4866856..4868250 Roseiflexus sp. RS-1 5210868 YP_001278190.1 CDS RoseRS_3887 NC_009523.1 4868264 4868620 R hypothetical protein complement(4868264..4868620) Roseiflexus sp. RS-1 5210869 YP_001278191.1 CDS RoseRS_3888 NC_009523.1 4869400 4870683 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 4869400..4870683 Roseiflexus sp. RS-1 5210870 YP_001278192.1 CDS RoseRS_3889 NC_009523.1 4870694 4871284 D PFAM: protein of unknown function DUF45; hypothetical protein 4870694..4871284 Roseiflexus sp. RS-1 5210871 YP_001278193.1 CDS RoseRS_3890 NC_009523.1 4871892 4872380 D hypothetical protein 4871892..4872380 Roseiflexus sp. RS-1 5210873 YP_001278194.1 CDS RoseRS_3891 NC_009523.1 4872393 4872863 R hypothetical protein complement(4872393..4872863) Roseiflexus sp. RS-1 5210874 YP_001278195.1 CDS RoseRS_3892 NC_009523.1 4872842 4873153 R hypothetical protein complement(4872842..4873153) Roseiflexus sp. RS-1 5210875 YP_001278196.1 CDS RoseRS_3893 NC_009523.1 4873203 4874711 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase complement(4873203..4874711) Roseiflexus sp. RS-1 5210876 YP_001278197.1 CDS RoseRS_3894 NC_009523.1 4874821 4876044 R PFAM: putative RNA methylase; conserved hypothetical protein 95; (Uracil-5)-methyltransferase; (uracil-5)-methyltransferase complement(4874821..4876044) Roseiflexus sp. RS-1 5210877 YP_001278198.1 CDS RoseRS_3895 NC_009523.1 4876156 4876644 D hypothetical protein 4876156..4876644 Roseiflexus sp. RS-1 5210878 YP_001278199.1 CDS RoseRS_3896 NC_009523.1 4876906 4879518 D hypothetical protein 4876906..4879518 Roseiflexus sp. RS-1 5210879 YP_001278200.1 CDS RoseRS_3897 NC_009523.1 4879702 4880688 R PFAM: aldo/keto reductase; aldo/keto reductase complement(4879702..4880688) Roseiflexus sp. RS-1 5210880 YP_001278201.1 CDS RoseRS_3898 NC_009523.1 4880709 4881698 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(4880709..4881698) Roseiflexus sp. RS-1 5210881 YP_001278202.1 CDS RoseRS_3899 NC_009523.1 4881721 4882167 R hypothetical protein complement(4881721..4882167) Roseiflexus sp. RS-1 5210882 YP_001278203.1 CDS RoseRS_3900 NC_009523.1 4882276 4883271 R PFAM: conserved hypothetical protein 374; hypothetical protein complement(4882276..4883271) Roseiflexus sp. RS-1 5210883 YP_001278204.1 CDS RoseRS_3901 NC_009523.1 4883268 4884203 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4883268..4884203) Roseiflexus sp. RS-1 5210884 YP_001278205.1 CDS thrH NC_009523.1 4884356 4884973 R catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; phosphoserine phosphatase complement(4884356..4884973) Roseiflexus sp. RS-1 5210885 YP_001278206.1 CDS RoseRS_3903 NC_009523.1 4885317 4885805 D hypothetical protein 4885317..4885805 Roseiflexus sp. RS-1 5210886 YP_001278207.1 CDS RoseRS_3904 NC_009523.1 4885802 4886146 D hypothetical protein 4885802..4886146 Roseiflexus sp. RS-1 5210887 YP_001278208.1 CDS RoseRS_3905 NC_009523.1 4886540 4886944 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(4886540..4886944) Roseiflexus sp. RS-1 5210888 YP_001278209.1 CDS RoseRS_3906 NC_009523.1 4886941 4887174 R PFAM: SpoVT/AbrB domain protein; SpoVT/AbrB domain-containing protein complement(4886941..4887174) Roseiflexus sp. RS-1 5210889 YP_001278210.1 CDS RoseRS_3907 NC_009523.1 4887617 4889794 R hypothetical protein complement(4887617..4889794) Roseiflexus sp. RS-1 5210890 YP_001278211.1 CDS RoseRS_3908 NC_009523.1 4889791 4892211 R hypothetical protein complement(4889791..4892211) Roseiflexus sp. RS-1 5210891 YP_001278212.1 CDS RoseRS_3909 NC_009523.1 4892228 4894321 D hypothetical protein 4892228..4894321 Roseiflexus sp. RS-1 5210892 YP_001278213.1 CDS RoseRS_3910 NC_009523.1 4894318 4897776 D PFAM: WD-40 repeat protein; WD-40 repeat-containing protein 4894318..4897776 Roseiflexus sp. RS-1 5210893 YP_001278214.1 CDS RoseRS_3911 NC_009523.1 4897789 4898970 D TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 4897789..4898970 Roseiflexus sp. RS-1 5210894 YP_001278215.1 CDS RoseRS_3912 NC_009523.1 4899303 4899695 D PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 4899303..4899695 Roseiflexus sp. RS-1 5210895 YP_001278216.1 CDS RoseRS_3913 NC_009523.1 4899862 4900410 D hypothetical protein 4899862..4900410 Roseiflexus sp. RS-1 5210896 YP_001278217.1 CDS RoseRS_3914 NC_009523.1 4900437 4901192 D hypothetical protein 4900437..4901192 Roseiflexus sp. RS-1 5210897 YP_001278218.1 CDS RoseRS_3915 NC_009523.1 4901210 4901743 D PFAM: protein of unknown function, ATP binding; Miro domain protein; hypothetical protein 4901210..4901743 Roseiflexus sp. RS-1 5210898 YP_001278219.1 CDS RoseRS_3916 NC_009523.1 4902021 4902530 D TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein 4902021..4902530 Roseiflexus sp. RS-1 5210899 YP_001278220.1 CDS RoseRS_3917 NC_009523.1 4902561 4903205 D PFAM: protein of unknown function DUF37; hypothetical protein 4902561..4903205 Roseiflexus sp. RS-1 5210900 YP_001278221.1 CDS RoseRS_3918 NC_009523.1 4903216 4903599 D PFAM: HEPN domain protein; HEPN domain-containing protein 4903216..4903599 Roseiflexus sp. RS-1 5210901 YP_001278222.1 CDS RoseRS_3919 NC_009523.1 4903586 4903939 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 4903586..4903939 Roseiflexus sp. RS-1 5210902 YP_001278223.1 CDS RoseRS_3920 NC_009523.1 4904028 4905005 R TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase complement(4904028..4905005) Roseiflexus sp. RS-1 5210903 YP_001278224.1 CDS RoseRS_3921 NC_009523.1 4905172 4906125 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 4905172..4906125 Roseiflexus sp. RS-1 5210904 YP_001278225.1 CDS RoseRS_3922 NC_009523.1 4906126 4907331 D PFAM: band 7 protein; hypothetical protein 4906126..4907331 Roseiflexus sp. RS-1 5210905 YP_001278226.1 CDS RoseRS_3923 NC_009523.1 4907315 4908259 D PFAM: PfkB domain protein; ribokinase-like domain-containing protein 4907315..4908259 Roseiflexus sp. RS-1 5210906 YP_001278227.1 CDS RoseRS_3924 NC_009523.1 4908330 4909661 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase 4908330..4909661 Roseiflexus sp. RS-1 5210907 YP_001278228.1 CDS RoseRS_3925 NC_009523.1 4909665 4913207 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 4909665..4913207 Roseiflexus sp. RS-1 5210908 YP_001278229.1 CDS RoseRS_3926 NC_009523.1 4913223 4914551 D PFAM: aminotransferase class-III; class III aminotransferase 4913223..4914551 Roseiflexus sp. RS-1 5210909 YP_001278230.1 CDS RoseRS_3927 NC_009523.1 4914589 4915218 D hypothetical protein 4914589..4915218 Roseiflexus sp. RS-1 5210910 YP_001278231.1 CDS RoseRS_3928 NC_009523.1 4915277 4916251 R TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; GDP-mannose 4,6-dehydratase complement(4915277..4916251) Roseiflexus sp. RS-1 5210911 YP_001278232.1 CDS RoseRS_3929 NC_009523.1 4916390 4918114 D PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; hypothetical protein 4916390..4918114 Roseiflexus sp. RS-1 5210912 YP_001278233.1 CDS sucC NC_009523.1 4918164 4919303 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(4918164..4919303) Roseiflexus sp. RS-1 5210913 YP_001278234.1 CDS RoseRS_3931 NC_009523.1 4919368 4919760 R hypothetical protein complement(4919368..4919760) Roseiflexus sp. RS-1 5210914 YP_001278235.1 CDS RoseRS_3932 NC_009523.1 4919860 4920150 D PFAM: PspC domain protein; phage shock protein PspC 4919860..4920150 Roseiflexus sp. RS-1 5210915 YP_001278236.1 CDS RoseRS_3933 NC_009523.1 4920406 4921071 R TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic region; thiamine pyrophosphokinase complement(4920406..4921071) Roseiflexus sp. RS-1 5210916 YP_001278237.1 CDS RoseRS_3934 NC_009523.1 4921079 4921945 R PFAM: fumarylacetoacetate (FAA) hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(4921079..4921945) Roseiflexus sp. RS-1 5210917 YP_001278238.1 CDS RoseRS_3935 NC_009523.1 4922236 4924935 R PFAM: Forkhead-associated protein; ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; FHA modulated ABC efflux pump ATPase/integral membrane protein complement(4922236..4924935) Roseiflexus sp. RS-1 5210918 YP_001278239.1 CDS RoseRS_3936 NC_009523.1 4925033 4926970 R hypothetical protein complement(4925033..4926970) Roseiflexus sp. RS-1 5210919 YP_001278240.1 CDS RoseRS_3938 NC_009523.1 4927895 4929484 R PFAM: Forkhead-associated protein; FHA domain-containing protein complement(4927895..4929484) Roseiflexus sp. RS-1 5210921 YP_001278241.1 CDS RoseRS_3939 NC_009523.1 4929902 4932076 D PFAM: Amylo-alpha-1,6-glucosidase; amylo-alpha-1,6-glucosidase 4929902..4932076 Roseiflexus sp. RS-1 5210923 YP_001278242.1 CDS RoseRS_3940 NC_009523.1 4932077 4933396 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(4932077..4933396) Roseiflexus sp. RS-1 5210924 YP_001278243.1 CDS RoseRS_3941 NC_009523.1 4933378 4933995 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; NADP oxidoreductase, coenzyme F420-dependent complement(4933378..4933995) Roseiflexus sp. RS-1 5210925 YP_001278244.1 CDS RoseRS_3942 NC_009523.1 4933992 4935002 R PFAM: ATPase, BadF/BadG/BcrA/BcrD type; BadF/BadG/BcrA/BcrD type ATPase complement(4933992..4935002) Roseiflexus sp. RS-1 5210926 YP_001278245.1 CDS RoseRS_3943 NC_009523.1 4935030 4936319 R PFAM: glycoside hydrolase, family 29 (alpha-L-fucosidase); alpha-L-fucosidase complement(4935030..4936319) Roseiflexus sp. RS-1 5210927 YP_001278246.1 CDS RoseRS_3944 NC_009523.1 4936359 4937315 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase complement(4936359..4937315) Roseiflexus sp. RS-1 5210928 YP_001278247.1 CDS RoseRS_3945 NC_009523.1 4937347 4938081 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(4937347..4938081) Roseiflexus sp. RS-1 5210929 YP_001278248.1 CDS RoseRS_3946 NC_009523.1 4942166 4944913 D hypothetical protein 4942166..4944913 Roseiflexus sp. RS-1 5210930 YP_001278249.1 CDS RoseRS_3949 NC_009523.1 4946366 4947025 R TIGRFAM: glutaredoxin-like domain protein; PFAM: glutaredoxin; glutaredoxin-like domain-containing protein complement(4946366..4947025) Roseiflexus sp. RS-1 5210933 YP_001278250.1 CDS RoseRS_3950 NC_009523.1 4947098 4947820 R PFAM: LmbE family protein; LmbE family protein complement(4947098..4947820) Roseiflexus sp. RS-1 5210934 YP_001278251.1 CDS RoseRS_3951 NC_009523.1 4947946 4948380 D hypothetical protein 4947946..4948380 Roseiflexus sp. RS-1 5210935 YP_001278252.1 CDS RoseRS_3952 NC_009523.1 4948381 4949622 D PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; major facilitator transporter 4948381..4949622 Roseiflexus sp. RS-1 5210936 YP_001278253.1 CDS RoseRS_3953 NC_009523.1 4949802 4950602 D PFAM: lipolytic enzyme, G-D-S-L family; GDSL family lipase 4949802..4950602 Roseiflexus sp. RS-1 5210937 YP_001278254.1 CDS RoseRS_3954 NC_009523.1 4950876 4952069 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; DegT/DnrJ/EryC1/StrS aminotransferase 4950876..4952069 Roseiflexus sp. RS-1 5210938 YP_001278255.1 CDS RoseRS_3955 NC_009523.1 4952053 4953270 D PFAM: protein of unknown function DUF52; hypothetical protein 4952053..4953270 Roseiflexus sp. RS-1 5210939 YP_001278256.1 CDS RoseRS_3956 NC_009523.1 4953619 4954431 D PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; SH3 type 3 domain-containing protein 4953619..4954431 Roseiflexus sp. RS-1 5210940 YP_001278257.1 CDS RoseRS_3957 NC_009523.1 4955371 4956840 R PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; beta-lactamase domain-containing protein complement(4955371..4956840) Roseiflexus sp. RS-1 5210941 YP_001278258.1 CDS RoseRS_3958 NC_009523.1 4956859 4957977 R NAD(FAD)-dependent dehydrogenase-like protein complement(4956859..4957977) Roseiflexus sp. RS-1 5210942 YP_001278259.1 CDS RoseRS_3959 NC_009523.1 4958062 4958745 R PFAM: protein of unknown function DUF1641; hypothetical protein complement(4958062..4958745) Roseiflexus sp. RS-1 5210943 YP_001278260.1 CDS RoseRS_3960 NC_009523.1 4959173 4960135 D PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 4959173..4960135 Roseiflexus sp. RS-1 5210944 YP_001278261.1 CDS RoseRS_3961 NC_009523.1 4960654 4961121 R hypothetical protein complement(4960654..4961121) Roseiflexus sp. RS-1 5210945 YP_001278262.1 CDS RoseRS_3962 NC_009523.1 4961220 4961450 D hypothetical protein 4961220..4961450 Roseiflexus sp. RS-1 5210946 YP_001278263.1 CDS RoseRS_3963 NC_009523.1 4962410 4963228 R PFAM: PfkB domain protein; ribokinase-like domain-containing protein complement(4962410..4963228) Roseiflexus sp. RS-1 5210947 YP_001278264.1 CDS RoseRS_3964 NC_009523.1 4963305 4963994 R PFAM: single-stranded nucleic acid binding R3H domain protein; single-stranded nucleic acid binding R3H domain-containing protein complement(4963305..4963994) Roseiflexus sp. RS-1 5210948 YP_001278265.1 CDS RoseRS_3965 NC_009523.1 4964052 4965044 R PFAM: 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein complement(4964052..4965044) Roseiflexus sp. RS-1 5210949 YP_001278266.1 CDS RoseRS_3966 NC_009523.1 4965131 4965499 R TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; ribonuclease P protein component complement(4965131..4965499) Roseiflexus sp. RS-1 5210950 YP_001278267.1 CDS RoseRS_3967 NC_009523.1 4965564 4965737 R PFAM: ribosomal protein L34; 50S ribosomal protein L34 complement(4965564..4965737) Roseiflexus sp. RS-1 5210951 YP_001278268.1 CDS RoseRS_3968 NC_009523.1 4966079 4967623 R PFAM: RNA binding S1 domain protein; RNA-binding S1 domain-containing protein complement(4966079..4967623) Roseiflexus sp. RS-1 5210952 YP_001278269.1 CDS RoseRS_3971 NC_009523.1 4970061 4970219 D hypothetical protein 4970061..4970219 Roseiflexus sp. RS-1 5210954 YP_001278270.1 CDS RoseRS_3972 NC_009523.1 4970216 4972081 D hypothetical protein 4970216..4972081 Roseiflexus sp. RS-1 5210955 YP_001278271.1 CDS RoseRS_3973 NC_009523.1 4972094 4973023 D PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase 4972094..4973023 Roseiflexus sp. RS-1 5210956 YP_001278272.1 CDS RoseRS_3974 NC_009523.1 4973030 4973821 D PFAM: LmbE family protein; LmbE family protein 4973030..4973821 Roseiflexus sp. RS-1 5210957 YP_001278273.1 CDS RoseRS_3975 NC_009523.1 4973806 4974906 D PFAM: Methicillin resistance protein; methicillin resistance protein 4973806..4974906 Roseiflexus sp. RS-1 5210958 YP_001278274.1 CDS RoseRS_3976 NC_009523.1 4974912 4975181 D hypothetical protein 4974912..4975181 Roseiflexus sp. RS-1 5210959 YP_001278275.1 CDS RoseRS_3977 NC_009523.1 4975178 4975954 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 4975178..4975954 Roseiflexus sp. RS-1 5210960 YP_001278276.1 CDS RoseRS_3979 NC_009523.1 4976353 4977855 R PFAM: peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A complement(4976353..4977855) Roseiflexus sp. RS-1 5210962 YP_001278277.1 CDS RoseRS_3980 NC_009523.1 4978646 4981852 R PFAM: SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SMART: DEAD-like helicases-like; non-specific serine/threonine protein kinase complement(4978646..4981852) Roseiflexus sp. RS-1 5210963 YP_001278278.1 CDS RoseRS_3981 NC_009523.1 4982038 4982799 D PFAM: DSBA oxidoreductase; DSBA oxidoreductase 4982038..4982799 Roseiflexus sp. RS-1 5210964 YP_001278279.1 CDS RoseRS_3982 NC_009523.1 4983254 4984660 D TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD 4983254..4984660 Roseiflexus sp. RS-1 5210965 YP_001278280.1 CDS RoseRS_3983 NC_009523.1 4984674 4985648 D TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 4984674..4985648 Roseiflexus sp. RS-1 5210966 YP_001278281.1 CDS RoseRS_3984 NC_009523.1 4985744 4986481 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(4985744..4986481) Roseiflexus sp. RS-1 5210967 YP_001278282.1 CDS RoseRS_3985 NC_009523.1 4986642 4987757 R TIGRFAM: putative metalloendopeptidase, glycoprotease family; PFAM: peptidase M22, glycoprotease; metalloendopeptidase complement(4986642..4987757) Roseiflexus sp. RS-1 5210968 YP_001278283.1 CDS RoseRS_3986 NC_009523.1 4987845 4988558 D PFAM: iron dependent repressor; FeoA family protein; FeoA family protein 4987845..4988558 Roseiflexus sp. RS-1 5210969 YP_001278284.1 CDS RoseRS_3987 NC_009523.1 4988555 4989715 R hypothetical protein complement(4988555..4989715) Roseiflexus sp. RS-1 5210970 YP_001278285.1 CDS RoseRS_3988 NC_009523.1 4989761 4990129 R hypothetical protein complement(4989761..4990129) Roseiflexus sp. RS-1 5210971 YP_001278286.1 CDS RoseRS_3989 NC_009523.1 4990126 4991415 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(4990126..4991415) Roseiflexus sp. RS-1 5210972 YP_001278287.1 CDS RoseRS_3990 NC_009523.1 4991527 4992438 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; Shikimate/quinate 5-dehydrogenase; 6-phosphogluconate dehydrogenase complement(4991527..4992438) Roseiflexus sp. RS-1 5210973 YP_001278288.1 CDS RoseRS_3991 NC_009523.1 4992617 4993960 D hypothetical protein 4992617..4993960 Roseiflexus sp. RS-1 5210974 YP_001278289.1 CDS RoseRS_3992 NC_009523.1 4993965 4995908 D hypothetical protein 4993965..4995908 Roseiflexus sp. RS-1 5210975 YP_001278290.1 CDS RoseRS_3993 NC_009523.1 4996052 4998100 D PFAM: PKD domain containing protein; PKD domain-containing protein 4996052..4998100 Roseiflexus sp. RS-1 5210976 YP_001278291.1 CDS RoseRS_3994 NC_009523.1 4998133 5000178 D hypothetical protein 4998133..5000178 Roseiflexus sp. RS-1 5210977 YP_001278292.1 CDS RoseRS_3995 NC_009523.1 5000214 5000702 R hypothetical protein complement(5000214..5000702) Roseiflexus sp. RS-1 5210978 YP_001278293.1 CDS RoseRS_3996 NC_009523.1 5000814 5001374 R PFAM: protein of unknown function DUF820; hypothetical protein complement(5000814..5001374) Roseiflexus sp. RS-1 5210979 YP_001278294.1 CDS RoseRS_3999 NC_009523.1 5005083 5005418 R hypothetical protein complement(5005083..5005418) Roseiflexus sp. RS-1 5210982 YP_001278295.1 CDS RoseRS_4000 NC_009523.1 5006060 5006458 R hypothetical protein complement(5006060..5006458) Roseiflexus sp. RS-1 5210983 YP_001278296.1 CDS RoseRS_4001 NC_009523.1 5006522 5006884 D hypothetical protein 5006522..5006884 Roseiflexus sp. RS-1 5210984 YP_001278297.1 CDS RoseRS_4002 NC_009523.1 5006914 5007675 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(5006914..5007675) Roseiflexus sp. RS-1 5210985 YP_001278298.1 CDS RoseRS_4003 NC_009523.1 5007692 5008903 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(5007692..5008903) Roseiflexus sp. RS-1 5210986 YP_001278299.1 CDS RoseRS_4004 NC_009523.1 5008907 5010097 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(5008907..5010097) Roseiflexus sp. RS-1 5210987 YP_001278300.1 CDS RoseRS_4005 NC_009523.1 5010167 5011336 R PFAM: extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(5010167..5011336) Roseiflexus sp. RS-1 5210988 YP_001278301.1 CDS RoseRS_4006 NC_009523.1 5011637 5012047 D hypothetical protein 5011637..5012047 Roseiflexus sp. RS-1 5210989 YP_001278302.1 CDS RoseRS_4007 NC_009523.1 5012044 5014974 D hypothetical protein 5012044..5014974 Roseiflexus sp. RS-1 5210990 YP_001278303.1 CDS RoseRS_4008 NC_009523.1 5015093 5015371 D PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 5015093..5015371 Roseiflexus sp. RS-1 5210991 YP_001278304.1 CDS RoseRS_4009 NC_009523.1 5015550 5017088 D hypothetical protein 5015550..5017088 Roseiflexus sp. RS-1 5210992 YP_001278305.1 CDS RoseRS_4010 NC_009523.1 5017108 5018319 D PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP 5017108..5018319 Roseiflexus sp. RS-1 5210993 YP_001278306.1 CDS RoseRS_4011 NC_009523.1 5018827 5019909 R PFAM: Peptidoglycan-binding LysM; polysaccharide deacetylase; polysaccharide deacetylase complement(5018827..5019909) Roseiflexus sp. RS-1 5210994 YP_001278307.1 CDS RoseRS_4012 NC_009523.1 5019982 5020497 R hypothetical protein complement(5019982..5020497) Roseiflexus sp. RS-1 5210995 YP_001278308.1 CDS RoseRS_4013 NC_009523.1 5020494 5021105 R PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding protein LysM complement(5020494..5021105) Roseiflexus sp. RS-1 5210996 YP_001278309.1 CDS RoseRS_4014 NC_009523.1 5021111 5023597 R TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; MutS2 family protein complement(5021111..5023597) Roseiflexus sp. RS-1 5210997 YP_001278310.1 CDS RoseRS_4015 NC_009523.1 5023645 5024199 R hypothetical protein complement(5023645..5024199) Roseiflexus sp. RS-1 5210998 YP_001278311.1 CDS RoseRS_4016 NC_009523.1 5024518 5025399 R PFAM: Abortive infection protein; abortive infection protein complement(5024518..5025399) Roseiflexus sp. RS-1 5210999 YP_001278312.1 CDS RoseRS_4017 NC_009523.1 5025374 5025946 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(5025374..5025946) Roseiflexus sp. RS-1 5211000 YP_001278313.1 CDS RoseRS_4018 NC_009523.1 5026109 5028403 D TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase alpha (molybdopterin) subunit 5026109..5028403 Roseiflexus sp. RS-1 5211001 YP_001278314.1 CDS RoseRS_4019 NC_009523.1 5028456 5029322 D TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; formate dehydrogenase family accessory protein FdhD 5028456..5029322 Roseiflexus sp. RS-1 5211002 YP_001278315.1 CDS RoseRS_4020 NC_009523.1 5029577 5030902 D PFAM: zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein 5029577..5030902 Roseiflexus sp. RS-1 5211003 YP_001278316.1 CDS RoseRS_4021 NC_009523.1 5030899 5032335 D hypothetical protein 5030899..5032335 Roseiflexus sp. RS-1 5211004 YP_001278317.1 CDS RoseRS_4022 NC_009523.1 5032332 5033411 D PFAM: ATPase associated with various cellular activities, AAA_5; ATPase 5032332..5033411 Roseiflexus sp. RS-1 5211005 YP_001278318.1 CDS RoseRS_4023 NC_009523.1 5033417 5035666 D hypothetical protein 5033417..5035666 Roseiflexus sp. RS-1 5211006 YP_001278319.1 CDS RoseRS_4024 NC_009523.1 5035653 5036858 D PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor, type A; VWA containing CoxE family protein 5035653..5036858 Roseiflexus sp. RS-1 5211007 YP_001278320.1 CDS RoseRS_4025 NC_009523.1 5037105 5041676 D PFAM: WD-40 repeat protein; NB-ARC domain protein; SMART: Pyrrolo-quinoline quinone; NB-ARC domain-containing protein 5037105..5041676 Roseiflexus sp. RS-1 5211008 YP_001278321.1 CDS RoseRS_4026 NC_009523.1 5042648 5043184 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(5042648..5043184) Roseiflexus sp. RS-1 5211009 YP_001278322.1 CDS RoseRS_4027 NC_009523.1 5043465 5044115 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 5043465..5044115 Roseiflexus sp. RS-1 5211010 YP_001278323.1 CDS RoseRS_4028 NC_009523.1 5044069 5044947 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(5044069..5044947) Roseiflexus sp. RS-1 5211011 YP_001278324.1 CDS RoseRS_4029 NC_009523.1 5045570 5047678 D MerR family transcriptional regulator 5045570..5047678 Roseiflexus sp. RS-1 5211012 YP_001278325.1 CDS RoseRS_4030 NC_009523.1 5048235 5050298 D hypothetical protein 5048235..5050298 Roseiflexus sp. RS-1 5211013 YP_001278326.1 CDS RoseRS_4031 NC_009523.1 5050482 5050937 D hypothetical protein 5050482..5050937 Roseiflexus sp. RS-1 5211014 YP_001278327.1 CDS RoseRS_4032 NC_009523.1 5050934 5052010 D PFAM: protein kinase; SMART: serine/threonine protein kinase; protein kinase 5050934..5052010 Roseiflexus sp. RS-1 5211015 YP_001278328.1 CDS RoseRS_4033 NC_009523.1 5052612 5053669 R PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein complement(join(5052612..5053139,5053139..5053669)) Roseiflexus sp. RS-1 5211016 YP_001278329.1 CDS RoseRS_4034 NC_009523.1 5054212 5055037 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(join(5054212..5054637,5054639..5055037)) Roseiflexus sp. RS-1 5211017 YP_001278330.1 CDS RoseRS_4036 NC_009523.1 5055411 5056298 D hypothetical protein 5055411..5056298 Roseiflexus sp. RS-1 5211019 YP_001278331.1 CDS RoseRS_4037 NC_009523.1 5056694 5057401 D PFAM: metallophosphoesterase; metallophosphoesterase 5056694..5057401 Roseiflexus sp. RS-1 5211020 YP_001278332.1 CDS RoseRS_4038 NC_009523.1 5057444 5058718 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cystathionine gamma-synthase 5057444..5058718 Roseiflexus sp. RS-1 5211021 YP_001278333.1 CDS RoseRS_4039 NC_009523.1 5058869 5061988 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; GAF domain protein; multi-sensor hybrid histidine kinase 5058869..5061988 Roseiflexus sp. RS-1 5211022 YP_001278334.1 CDS RoseRS_4040 NC_009523.1 5062560 5063945 D hypothetical protein 5062560..5063945 Roseiflexus sp. RS-1 5211023 YP_001278335.1 CDS RoseRS_4041 NC_009523.1 5064605 5064988 R PFAM: response regulator receiver; response regulator receiver protein complement(5064605..5064988) Roseiflexus sp. RS-1 5211024 YP_001278336.1 CDS RoseRS_4042 NC_009523.1 5065145 5065819 R non-specific protein-tyrosine kinase complement(5065145..5065819) Roseiflexus sp. RS-1 5211025 YP_001278337.1 CDS RoseRS_4043 NC_009523.1 5066014 5066736 R PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(5066014..5066736) Roseiflexus sp. RS-1 5211026 YP_001278338.1 CDS RoseRS_4044 NC_009523.1 5066738 5067364 R hypothetical protein complement(5066738..5067364) Roseiflexus sp. RS-1 5211027 YP_001278339.1 CDS RoseRS_4045 NC_009523.1 5067582 5068664 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5067582..5068664) Roseiflexus sp. RS-1 5211028 YP_001278340.1 CDS RoseRS_4046 NC_009523.1 5068776 5069822 D hypothetical protein 5068776..5069822 Roseiflexus sp. RS-1 5211029 YP_001278341.1 CDS RoseRS_4047 NC_009523.1 5069836 5070537 D hypothetical protein 5069836..5070537 Roseiflexus sp. RS-1 5211030 YP_001278342.1 CDS RoseRS_4048 NC_009523.1 5070586 5071386 R PFAM: conserved hypothetical protein 730; hypothetical protein complement(5070586..5071386) Roseiflexus sp. RS-1 5211031 YP_001278343.1 CDS RoseRS_4049 NC_009523.1 5071513 5072202 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 5071513..5072202 Roseiflexus sp. RS-1 5211032 YP_001278344.1 CDS RoseRS_4050 NC_009523.1 5072232 5072591 D hypothetical protein 5072232..5072591 Roseiflexus sp. RS-1 5211033 YP_001278345.1 CDS RoseRS_4051 NC_009523.1 5072740 5073558 R TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; biotin--acetyl-CoA-carboxylase ligase complement(5072740..5073558) Roseiflexus sp. RS-1 5211034 YP_001278346.1 CDS RoseRS_4052 NC_009523.1 5074074 5075087 D TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 5074074..5075087 Roseiflexus sp. RS-1 5211035 YP_001278347.1 CDS RoseRS_4053 NC_009523.1 5075209 5075994 D TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 5075209..5075994 Roseiflexus sp. RS-1 5211036 YP_001278348.1 CDS RoseRS_4054 NC_009523.1 5075991 5076506 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5075991..5076506 Roseiflexus sp. RS-1 5211037 YP_001278349.1 CDS RoseRS_4055 NC_009523.1 5076542 5077702 D TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; carbamoyl-phosphate synthase small subunit 5076542..5077702 Roseiflexus sp. RS-1 5211038 YP_001278350.1 CDS RoseRS_4056 NC_009523.1 5077745 5078203 D PFAM: histidine kinase A domain protein domain protein; histidine kinase A domain-containing protein 5077745..5078203 Roseiflexus sp. RS-1 5211039 YP_001278351.1 CDS RoseRS_4057 NC_009523.1 5078275 5081616 D TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; carbamoyl-phosphate synthase large subunit 5078275..5081616 Roseiflexus sp. RS-1 5211040 YP_001278352.1 CDS RoseRS_4058 NC_009523.1 5081613 5082836 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 5081613..5082836 Roseiflexus sp. RS-1 5211041 YP_001278353.1 CDS RoseRS_4059 NC_009523.1 5083223 5084446 D TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 5083223..5084446 Roseiflexus sp. RS-1 5211042 YP_001278354.1 CDS RoseRS_4060 NC_009523.1 5084427 5086895 D hypothetical protein 5084427..5086895 Roseiflexus sp. RS-1 5211043 YP_001278355.1 CDS RoseRS_4061 NC_009523.1 5087362 5087724 D hypothetical protein 5087362..5087724 Roseiflexus sp. RS-1 5211044 YP_001278356.1 CDS RoseRS_4062 NC_009523.1 5087735 5088100 D hypothetical protein 5087735..5088100 Roseiflexus sp. RS-1 5211045 YP_001278357.1 CDS RoseRS_4063 NC_009523.1 5088113 5090257 D hypothetical protein 5088113..5090257 Roseiflexus sp. RS-1 5211046 YP_001278358.1 CDS RoseRS_4064 NC_009523.1 5091195 5093039 D TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II; sugar isomerase (SIS); glucosamine--fructose-6-phosphate aminotransferase 5091195..5093039 Roseiflexus sp. RS-1 5211047 YP_001278359.1 CDS RoseRS_4065 NC_009523.1 5093065 5094009 D PFAM: ferrochelatase; ferrochelatase 5093065..5094009 Roseiflexus sp. RS-1 5211048 YP_001278360.1 CDS RoseRS_4066 NC_009523.1 5094219 5095064 D hypothetical protein 5094219..5095064 Roseiflexus sp. RS-1 5211049 YP_001278361.1 CDS RoseRS_4067 NC_009523.1 5096269 5098134 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 5096269..5098134 Roseiflexus sp. RS-1 5211050 YP_001278362.1 CDS RoseRS_4068 NC_009523.1 5098265 5099026 D PFAM: protein of unknown function DUF124; hypothetical protein 5098265..5099026 Roseiflexus sp. RS-1 5211051 YP_001278363.1 CDS RoseRS_4069 NC_009523.1 5099099 5099557 R hypothetical protein complement(5099099..5099557) Roseiflexus sp. RS-1 5211052 YP_001278364.1 CDS RoseRS_4070 NC_009523.1 5100605 5103082 D PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 5100605..5103082 Roseiflexus sp. RS-1 5211053 YP_001278365.1 CDS RoseRS_4071 NC_009523.1 5103600 5104337 D hypothetical protein 5103600..5104337 Roseiflexus sp. RS-1 5211054 YP_001278366.1 CDS RoseRS_4072 NC_009523.1 5104413 5105225 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5104413..5105225 Roseiflexus sp. RS-1 5211055 YP_001278367.1 CDS RoseRS_4073 NC_009523.1 5105307 5106311 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5105307..5106311) Roseiflexus sp. RS-1 5211056 YP_001278368.1 CDS RoseRS_4074 NC_009523.1 5106693 5109014 R PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; group 1 glycosyl transferase complement(5106693..5109014) Roseiflexus sp. RS-1 5211057 YP_001278369.1 CDS RoseRS_4075 NC_009523.1 5109217 5111451 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5109217..5111451) Roseiflexus sp. RS-1 5211058 YP_001278370.1 CDS RoseRS_4076 NC_009523.1 5111460 5112380 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase complement(5111460..5112380) Roseiflexus sp. RS-1 5211059 YP_001278371.1 CDS RoseRS_4077 NC_009523.1 5112380 5113096 R PFAM: Nucleotidyl transferase; nucleotidyl transferase complement(5112380..5113096) Roseiflexus sp. RS-1 5211060 YP_001278372.1 CDS RoseRS_4078 NC_009523.1 5113099 5114085 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(5113099..5114085) Roseiflexus sp. RS-1 5211061 YP_001278373.1 CDS RoseRS_4079 NC_009523.1 5114137 5115180 R PFAM: conserved hypothetical protein 374; hypothetical protein complement(5114137..5115180) Roseiflexus sp. RS-1 5211062 YP_001278374.1 CDS RoseRS_4080 NC_009523.1 5115191 5116015 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase complement(5115191..5116015) Roseiflexus sp. RS-1 5211063 YP_001278375.1 CDS RoseRS_4081 NC_009523.1 5116051 5117010 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5116051..5117010) Roseiflexus sp. RS-1 5211064 YP_001278376.1 CDS RoseRS_4082 NC_009523.1 5117007 5119487 R hypothetical protein complement(5117007..5119487) Roseiflexus sp. RS-1 5211065 YP_001278377.1 CDS RoseRS_4083 NC_009523.1 5119549 5120606 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(5119549..5120079,5120079..5120606) Roseiflexus sp. RS-1 5211066 YP_001278378.1 CDS RoseRS_4084 NC_009523.1 5120771 5122636 R hypothetical protein complement(5120771..5122636) Roseiflexus sp. RS-1 5211067 YP_001278379.1 CDS RoseRS_4085 NC_009523.1 5122661 5123434 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5122661..5123434) Roseiflexus sp. RS-1 5211068 YP_001278380.1 CDS RoseRS_4086 NC_009523.1 5123450 5124199 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(5123450..5124199) Roseiflexus sp. RS-1 5211069 YP_001278381.1 CDS RoseRS_4087 NC_009523.1 5124238 5125248 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5124238..5125248) Roseiflexus sp. RS-1 5211070 YP_001278382.1 CDS RoseRS_4088 NC_009523.1 5125245 5128343 R PFAM: glycosyl transferase, family 2; UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; glycosyl transferase family protein complement(5125245..5128343) Roseiflexus sp. RS-1 5211071 YP_001278383.1 CDS RoseRS_4089 NC_009523.1 5128348 5130960 R PFAM: ABC transporter related; Methyltransferase type 11; Methyltransferase type 12; SMART: AAA ATPase; ABC transporter-like protein complement(5128348..5130960) Roseiflexus sp. RS-1 5211072 YP_001278384.1 CDS RoseRS_4090 NC_009523.1 5131610 5132038 R PFAM: HEPN domain protein; HEPN domain-containing protein complement(5131610..5132038) Roseiflexus sp. RS-1 5211073 YP_001278385.1 CDS RoseRS_4091 NC_009523.1 5132028 5132393 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(5132028..5132393) Roseiflexus sp. RS-1 5211074 YP_001278386.1 CDS RoseRS_4092 NC_009523.1 5133017 5133496 R hypothetical protein complement(5133017..5133496) Roseiflexus sp. RS-1 5211075 YP_001278387.1 CDS RoseRS_4093 NC_009523.1 5133435 5133869 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(5133435..5133869) Roseiflexus sp. RS-1 5211076 YP_001278388.1 CDS RoseRS_4094 NC_009523.1 5133959 5135365 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5133959..5135365) Roseiflexus sp. RS-1 5211077 YP_001278389.1 CDS RoseRS_4095 NC_009523.1 5135875 5136932 D PFAM: transposase, IS4 family protein; this transposase is present in multiple copies in the genome; each copy contains a frameshift at the sequence CCCCCCTTTTT and 7 copies of repeat with repeat unit SCEEP; pfam01609 is interrupted by this repeat, however it is restored upon the removal of repetitive sequence; transposase, IS4 family protein join(5135875..5136405,5136405..5136932) Roseiflexus sp. RS-1 5211078 YP_001278390.1 CDS RoseRS_4096 NC_009523.1 5137049 5137900 R PFAM: ABC-2 type transporter; ABC-2 type transporter complement(5137049..5137900) Roseiflexus sp. RS-1 5211079 YP_001278391.1 CDS RoseRS_4097 NC_009523.1 5138239 5138820 R TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(5138239..5138820) Roseiflexus sp. RS-1 5211080 YP_001278392.1 CDS RoseRS_4098 NC_009523.1 5138891 5139298 R PFAM: protein of unknown function DUF86; hypothetical protein complement(5138891..5139298) Roseiflexus sp. RS-1 5211081 YP_001278393.1 CDS RoseRS_4099 NC_009523.1 5139288 5139677 R hypothetical protein complement(5139288..5139677) Roseiflexus sp. RS-1 5211082 YP_001278394.1 CDS RoseRS_4100 NC_009523.1 5139872 5140849 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(5139872..5140849) Roseiflexus sp. RS-1 5211083 YP_001278395.1 CDS RoseRS_4101 NC_009523.1 5141063 5141479 R hypothetical protein complement(5141063..5141479) Roseiflexus sp. RS-1 5211084 YP_001278396.1 CDS RoseRS_4102 NC_009523.1 5141696 5142280 R PFAM: response regulator receiver; ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein complement(5141696..5142280) Roseiflexus sp. RS-1 5211085 YP_001278397.1 CDS RoseRS_4103 NC_009523.1 5142597 5143259 D modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 5142597..5143259 Roseiflexus sp. RS-1 5211086 YP_001278398.1 CDS RoseRS_4104 NC_009523.1 5143989 5145401 D PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor 5143989..5145401 Roseiflexus sp. RS-1 5211087 YP_001278399.1 CDS RoseRS_4105 NC_009523.1 5145596 5146366 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5145596..5146366 Roseiflexus sp. RS-1 5211088 YP_001278400.1 CDS RoseRS_4106 NC_009523.1 5146376 5147080 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5146376..5147080 Roseiflexus sp. RS-1 5211089 YP_001278401.1 CDS RoseRS_4107 NC_009523.1 5147091 5148650 D PFAM: inner-membrane translocator; inner-membrane translocator 5147091..5148650 Roseiflexus sp. RS-1 5211090 YP_001278402.1 CDS RoseRS_4108 NC_009523.1 5148654 5149739 D PFAM: inner-membrane translocator; inner-membrane translocator 5148654..5149739 Roseiflexus sp. RS-1 5211091 YP_001278403.1 CDS RoseRS_4109 NC_009523.1 5149998 5151185 D TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 5149998..5151185 Roseiflexus sp. RS-1 5211092 YP_001278404.1 CDS RoseRS_4110 NC_009523.1 5151148 5152011 D hypothetical protein 5151148..5152011 Roseiflexus sp. RS-1 5211093 YP_001278405.1 CDS RoseRS_4111 NC_009523.1 5152015 5152425 D PFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease vsr 5152015..5152425 Roseiflexus sp. RS-1 5211094 YP_001278406.1 CDS RoseRS_4112 NC_009523.1 5152425 5153390 D PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 5152425..5153390 Roseiflexus sp. RS-1 5211095 YP_001278407.1 CDS RoseRS_4113 NC_009523.1 5153447 5154721 D PFAM: glycoside hydrolase, family 4; glycoside hydrolase family protein 5153447..5154721 Roseiflexus sp. RS-1 5211096 YP_001278408.1 CDS RoseRS_4114 NC_009523.1 5154725 5155924 D hypothetical protein 5154725..5155924 Roseiflexus sp. RS-1 5211097 YP_001278409.1 CDS RoseRS_4115 NC_009523.1 5155968 5156810 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(5155968..5156810) Roseiflexus sp. RS-1 5211098 YP_001278410.1 CDS RoseRS_4116 NC_009523.1 5156786 5158153 R PFAM: Allergen V5/Tpx-1 family protein; allergen V5/Tpx-1 family protein complement(5156786..5158153) Roseiflexus sp. RS-1 5211099 YP_001278411.1 CDS RoseRS_4117 NC_009523.1 5158424 5159140 D PFAM: phosphoribosyltransferase; phosphoribosyltransferase 5158424..5159140 Roseiflexus sp. RS-1 5211100 YP_001278412.1 CDS RoseRS_4118 NC_009523.1 5159140 5160369 D hypothetical protein 5159140..5160369 Roseiflexus sp. RS-1 5211101 YP_001278413.1 CDS RoseRS_4119 NC_009523.1 5160369 5160866 D hypothetical protein 5160369..5160866 Roseiflexus sp. RS-1 5211102 YP_001278414.1 CDS RoseRS_4120 NC_009523.1 5160917 5162041 D hypothetical protein 5160917..5162041 Roseiflexus sp. RS-1 5211103 YP_001278415.1 CDS RoseRS_4121 NC_009523.1 5162282 5163472 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 5162282..5163472 Roseiflexus sp. RS-1 5211104 YP_001278416.1 CDS RoseRS_4122 NC_009523.1 5163567 5165891 D TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 5163567..5165891 Roseiflexus sp. RS-1 5211105 YP_001278417.1 CDS RoseRS_4123 NC_009523.1 5165989 5166585 D PFAM: protein of unknown function DUF305; hypothetical protein 5165989..5166585 Roseiflexus sp. RS-1 5211106 YP_001278418.1 CDS RoseRS_4124 NC_009523.1 5166658 5168004 D PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphomannomutase 5166658..5168004 Roseiflexus sp. RS-1 5211107 YP_001278419.1 CDS RoseRS_4125 NC_009523.1 5168722 5169264 D PFAM: zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein 5168722..5169264 Roseiflexus sp. RS-1 5211109 YP_001278420.1 CDS RoseRS_4126 NC_009523.1 5169332 5170048 D PFAM: glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase 5169332..5170048 Roseiflexus sp. RS-1 5211110 YP_001278421.1 CDS RoseRS_4127 NC_009523.1 5170295 5171893 D PFAM: NLP/P60 protein; protein of unknown function DUF1058; SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; NLP/P60 protein 5170295..5171893 Roseiflexus sp. RS-1 5211111 YP_001278422.1 CDS RoseRS_4128 NC_009523.1 5172113 5173180 D TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 5172113..5173180 Roseiflexus sp. RS-1 5211112 YP_001278423.1 CDS glpX NC_009523.1 5173225 5174214 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(5173225..5174214) Roseiflexus sp. RS-1 5211113 YP_001278424.1 CDS RoseRS_4130 NC_009523.1 5174504 5174809 D PFAM: chaperonin Cpn10; chaperonin Cpn10 5174504..5174809 Roseiflexus sp. RS-1 5211114 YP_001278425.1 CDS RoseRS_4131 NC_009523.1 5174871 5176505 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; chaperonin GroEL 5174871..5176505 Roseiflexus sp. RS-1 5211115 YP_001278426.1 CDS RoseRS_4132 NC_009523.1 5176609 5177799 R PFAM: Monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase complement(5176609..5177799) Roseiflexus sp. RS-1 5211116 YP_001278427.1 CDS RoseRS_4133 NC_009523.1 5177895 5179082 R PFAM: aminotransferase, class I and II; class I/II aminotransferase complement(5177895..5179082) Roseiflexus sp. RS-1 5211117 YP_001278428.1 CDS RoseRS_4134 NC_009523.1 5179272 5180228 D PFAM: cytochrome oxidase assembly; cytochrome oxidase assembly 5179272..5180228 Roseiflexus sp. RS-1 5211118 YP_001278429.1 CDS RoseRS_4135 NC_009523.1 5180271 5181140 D PFAM: protein of unknown function DUF820; hypothetical protein 5180271..5181140 Roseiflexus sp. RS-1 5211119 YP_001278430.1 CDS RoseRS_4136 NC_009523.1 5181233 5181679 R hypothetical protein complement(5181233..5181679) Roseiflexus sp. RS-1 5211120 YP_001278431.1 CDS RoseRS_4137 NC_009523.1 5181699 5182598 D TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; arginase 5181699..5182598 Roseiflexus sp. RS-1 5211121 YP_001278432.1 CDS RoseRS_4138 NC_009523.1 5182760 5183002 D hypothetical protein 5182760..5183002 Roseiflexus sp. RS-1 5211122 YP_001278433.1 CDS RoseRS_4139 NC_009523.1 5183183 5183845 D hypothetical protein 5183183..5183845 Roseiflexus sp. RS-1 5211123 YP_001278434.1 CDS RoseRS_4140 NC_009523.1 5183855 5186887 D Fe-S-cluster-containing hydrogenase components 1-like protein 5183855..5186887 Roseiflexus sp. RS-1 5211124 YP_001278435.1 CDS RoseRS_4141 NC_009523.1 5186956 5188386 D PFAM: Polysulphide reductase, NrfD; polysulfide reductase, NrfD 5186956..5188386 Roseiflexus sp. RS-1 5211125 YP_001278436.1 CDS RoseRS_4142 NC_009523.1 5188392 5188970 D hypothetical protein 5188392..5188970 Roseiflexus sp. RS-1 5211126 YP_001278437.1 CDS RoseRS_4143 NC_009523.1 5188981 5189565 D hypothetical protein 5188981..5189565 Roseiflexus sp. RS-1 5211127 YP_001278438.1 CDS RoseRS_4144 NC_009523.1 5189723 5190967 D hypothetical protein 5189723..5190967 Roseiflexus sp. RS-1 5211128 YP_001278439.1 CDS RoseRS_4145 NC_009523.1 5191278 5191523 R hypothetical protein complement(5191278..5191523) Roseiflexus sp. RS-1 5211129 YP_001278440.1 CDS RoseRS_4146 NC_009523.1 5191716 5192900 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 5191716..5192900 Roseiflexus sp. RS-1 5211130 YP_001278441.1 CDS RoseRS_4147 NC_009523.1 5192908 5193525 D hypothetical protein 5192908..5193525 Roseiflexus sp. RS-1 5211131 YP_001278442.1 CDS RoseRS_4148 NC_009523.1 5194343 5195203 R TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(5194343..5195203) Roseiflexus sp. RS-1 5211132 YP_001278443.1 CDS RoseRS_4149 NC_009523.1 5195224 5196027 R TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(5195224..5196027) Roseiflexus sp. RS-1 5211133 YP_001278444.1 CDS RoseRS_4150 NC_009523.1 5196067 5197089 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(5196067..5197089) Roseiflexus sp. RS-1 5211134 YP_001278445.1 CDS RoseRS_4151 NC_009523.1 5197086 5198081 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(5197086..5198081) Roseiflexus sp. RS-1 5211135 YP_001278446.1 CDS RoseRS_4152 NC_009523.1 5198178 5199365 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate ABC transporter substrate-binding protein complement(5198178..5199365) Roseiflexus sp. RS-1 5211136 YP_001278447.1 CDS RoseRS_4153 NC_009523.1 5200109 5200783 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU complement(5200109..5200783) Roseiflexus sp. RS-1 5211137 YP_001278448.1 CDS RoseRS_4154 NC_009523.1 5200805 5201623 R TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(5200805..5201623) Roseiflexus sp. RS-1 5211138 YP_001278449.1 CDS RoseRS_4155 NC_009523.1 5201623 5202897 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(5201623..5202897) Roseiflexus sp. RS-1 5211139 YP_001278450.1 CDS RoseRS_4156 NC_009523.1 5202894 5203853 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(5202894..5203853) Roseiflexus sp. RS-1 5211140 YP_001278451.1 CDS RoseRS_4157 NC_009523.1 5204061 5206061 R TIGRFAM: phosphate binding protein; phosphate binding protein complement(5204061..5206061) Roseiflexus sp. RS-1 5211141 YP_001278452.1 CDS RoseRS_4158 NC_009523.1 5206371 5208041 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase, HAMP region domain protein; anti-sigma-factor antagonist 5206371..5208041 Roseiflexus sp. RS-1 5211142 YP_001278453.1 CDS RoseRS_4159 NC_009523.1 5208132 5208476 D hypothetical protein 5208132..5208476 Roseiflexus sp. RS-1 5211143 YP_001278454.1 CDS RoseRS_4160 NC_009523.1 5208597 5210147 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; nitrogen specific signal transduction histidine kinase NtrB 5208597..5210147 Roseiflexus sp. RS-1 5211144 YP_001278455.1 CDS RoseRS_4161 NC_009523.1 5210116 5210931 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 5210116..5210931 Roseiflexus sp. RS-1 5211145 YP_001278456.1 CDS RoseRS_4162 NC_009523.1 5210932 5211918 D PFAM: pyruvate carboxyltransferase; pyruvate carboxyltransferase 5210932..5211918 Roseiflexus sp. RS-1 5211146 YP_001278457.1 CDS RoseRS_4163 NC_009523.1 5212422 5213891 D hypothetical protein 5212422..5213891 Roseiflexus sp. RS-1 5211147 YP_001278458.1 CDS RoseRS_4164 NC_009523.1 5214021 5215307 R TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; isocitrate lyase complement(5214021..5215307) Roseiflexus sp. RS-1 5211148 YP_001278459.1 CDS RoseRS_4165 NC_009523.1 5215329 5216900 R Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase complement(5215329..5216900) Roseiflexus sp. RS-1 5211149 YP_001278460.1 CDS RoseRS_4166 NC_009523.1 5217211 5218434 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase 5217211..5218434 Roseiflexus sp. RS-1 5211150 YP_001278461.1 CDS RoseRS_4167 NC_009523.1 5218431 5220377 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; polysaccharide biosynthesis protein CapD 5218431..5220377 Roseiflexus sp. RS-1 5211151 YP_001278462.1 CDS RoseRS_4168 NC_009523.1 5220374 5221354 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 5220374..5221354 Roseiflexus sp. RS-1 5211152 YP_001278463.1 CDS RoseRS_4169 NC_009523.1 5221351 5221899 D hypothetical protein 5221351..5221899 Roseiflexus sp. RS-1 5211153 YP_001278464.1 CDS RoseRS_4170 NC_009523.1 5221896 5222612 D TIGRFAM: sortase family protein; PFAM: peptidase C60, sortase A and B; sortase family protein 5221896..5222612 Roseiflexus sp. RS-1 5211154 YP_001278465.1 CDS RoseRS_4171 NC_009523.1 5223106 5223756 D flavodoxin-like protein 5223106..5223756 Roseiflexus sp. RS-1 5211155 YP_001278466.1 CDS RoseRS_4172 NC_009523.1 5223888 5224949 R PFAM: MaoC domain protein dehydratase; dehydratase complement(5223888..5224949) Roseiflexus sp. RS-1 5211156 YP_001278467.1 CDS RoseRS_4173 NC_009523.1 5224965 5226008 R PFAM: HpcH/HpaI aldolase; HpcH/HpaI aldolase complement(5224965..5226008) Roseiflexus sp. RS-1 5211157 YP_001278468.1 CDS RoseRS_4174 NC_009523.1 5226018 5227244 R acyl-CoA transferase/carnitine dehydratase-like protein complement(5226018..5227244) Roseiflexus sp. RS-1 5211158 YP_001278469.1 CDS RoseRS_4175 NC_009523.1 5227579 5228799 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(5227579..5228799) Roseiflexus sp. RS-1 5211159 YP_001278470.1 CDS RoseRS_4176 NC_009523.1 5228836 5230116 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(5228836..5230116) Roseiflexus sp. RS-1 5211160 YP_001278471.1 CDS RoseRS_4177 NC_009523.1 5231359 5232207 D hypothetical protein 5231359..5232207 Roseiflexus sp. RS-1 5211161 YP_001278472.1 CDS RoseRS_4178 NC_009523.1 5232557 5233045 D hypothetical protein 5232557..5233045 Roseiflexus sp. RS-1 5211162 YP_001278473.1 CDS RoseRS_4179 NC_009523.1 5233405 5234952 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 5233405..5234952 Roseiflexus sp. RS-1 5211163 YP_001278474.1 CDS RoseRS_4180 NC_009523.1 5234983 5235807 D hypothetical protein 5234983..5235807 Roseiflexus sp. RS-1 5211164 YP_001278475.1 CDS RoseRS_4181 NC_009523.1 5236065 5238224 D TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; alpha-glucan phosphorylase 5236065..5238224 Roseiflexus sp. RS-1 5211165 YP_001278476.1 CDS RoseRS_4182 NC_009523.1 5238334 5238996 R PFAM: PspA/IM30 family protein; phage shock protein PspA complement(5238334..5238996) Roseiflexus sp. RS-1 5211166 YP_001278477.1 CDS RoseRS_4183 NC_009523.1 5239208 5240023 D hypothetical protein 5239208..5240023 Roseiflexus sp. RS-1 5211167 YP_001278478.1 CDS RoseRS_4184 NC_009523.1 5240126 5241178 D PFAM: DNA methylase N-4/N-6 domain protein; Helix-turn-helix, type 11 domain protein; DNA methylase N-4/N-6 domain-containing protein 5240126..5241178 Roseiflexus sp. RS-1 5211168 YP_001278479.1 CDS RoseRS_4185 NC_009523.1 5241181 5241891 D hypothetical protein 5241181..5241891 Roseiflexus sp. RS-1 5211169 YP_001278480.1 CDS RoseRS_4186 NC_009523.1 5242040 5244175 D PFAM: Rhodanese domain protein; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; sulfate transporter 5242040..5244175 Roseiflexus sp. RS-1 5211170 YP_001278481.1 CDS glpX NC_009523.1 5244612 5245607 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 5244612..5245607 Roseiflexus sp. RS-1 5211171 YP_001278482.1 CDS RoseRS_4188 NC_009523.1 5245604 5247010 D hypothetical protein 5245604..5247010 Roseiflexus sp. RS-1 5211172 YP_001278483.1 CDS RoseRS_4189 NC_009523.1 5247270 5248556 D TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein 5247270..5248556 Roseiflexus sp. RS-1 5211173 YP_001278484.1 CDS RoseRS_4191 NC_009523.1 5249088 5250734 D hypothetical protein 5249088..5250734 Roseiflexus sp. RS-1 5211175 YP_001278485.1 CDS RoseRS_4192 NC_009523.1 5251386 5252222 D hypothetical protein 5251386..5252222 Roseiflexus sp. RS-1 5211176 YP_001278486.1 CDS RoseRS_4193 NC_009523.1 5252244 5253707 R PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase complement(5252244..5253707) Roseiflexus sp. RS-1 5211177 YP_001278487.1 CDS RoseRS_4194 NC_009523.1 5253896 5254441 R PFAM: Appr-1-p processing domain protein; appr-1-p processing domain-containing protein complement(5253896..5254441) Roseiflexus sp. RS-1 5211178 YP_001278488.1 CDS RoseRS_4195 NC_009523.1 5254796 5255512 R hypothetical protein complement(5254796..5255512) Roseiflexus sp. RS-1 5211180 YP_001278489.1 CDS RoseRS_4196 NC_009523.1 5255783 5256043 R hypothetical protein complement(5255783..5256043) Roseiflexus sp. RS-1 5211181 YP_001278490.1 CDS RoseRS_4197 NC_009523.1 5256045 5258294 R hypothetical protein complement(5256045..5258294) Roseiflexus sp. RS-1 5211182 YP_001278491.1 CDS RoseRS_4198 NC_009523.1 5258720 5259370 D hypothetical protein 5258720..5259370 Roseiflexus sp. RS-1 5211183 YP_001278492.1 CDS RoseRS_4199 NC_009523.1 5259455 5261143 R TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein complement(5259455..5261143) Roseiflexus sp. RS-1 5211184 YP_001278493.1 CDS RoseRS_4200 NC_009523.1 5261483 5262082 R putative sensor protein complement(5261483..5262082) Roseiflexus sp. RS-1 5211185 YP_001278494.1 CDS dcd NC_009523.1 5262324 5262911 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 5262324..5262911 Roseiflexus sp. RS-1 5211186 YP_001278495.1 CDS RoseRS_4202 NC_009523.1 5262921 5263358 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(5262921..5263358) Roseiflexus sp. RS-1 5211187 YP_001278496.1 CDS RoseRS_4203 NC_009523.1 5263383 5264300 R PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein, transmembrane region complement(5263383..5264300) Roseiflexus sp. RS-1 5211188 YP_001278497.1 CDS RoseRS_4204 NC_009523.1 5264321 5265361 R PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(5264321..5265361) Roseiflexus sp. RS-1 5211189 YP_001278498.1 CDS RoseRS_4205 NC_009523.1 5265602 5266216 D PFAM: protein of unknown function DUF820; hypothetical protein 5265602..5266216 Roseiflexus sp. RS-1 5211190 YP_001278499.1 CDS RoseRS_4206 NC_009523.1 5266230 5267171 D hypothetical protein 5266230..5267171 Roseiflexus sp. RS-1 5211191 YP_001278500.1 CDS RoseRS_4207 NC_009523.1 5267168 5268064 R PFAM: glutamine amidotransferase class-I; peptidase C26; peptidase C26 complement(5267168..5268064) Roseiflexus sp. RS-1 5211192 YP_001278501.1 CDS RoseRS_4208 NC_009523.1 5268185 5269186 D PFAM: fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 5268185..5269186 Roseiflexus sp. RS-1 5211193 YP_001278502.1 CDS RoseRS_4209 NC_009523.1 5269197 5271263 D hypothetical protein 5269197..5271263 Roseiflexus sp. RS-1 5211194 YP_001278503.1 CDS RoseRS_4210 NC_009523.1 5271338 5271772 R PFAM: protein of unknown function DUF1486; hypothetical protein complement(5271338..5271772) Roseiflexus sp. RS-1 5211195 YP_001278504.1 CDS RoseRS_4211 NC_009523.1 5272135 5273283 D PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; FAD-binding monooxygenase 5272135..5273283 Roseiflexus sp. RS-1 5211196 YP_001278505.1 CDS RoseRS_4212 NC_009523.1 5273429 5275627 D hypothetical protein 5273429..5275627 Roseiflexus sp. RS-1 5211197 YP_001278506.1 CDS RoseRS_4213 NC_009523.1 5275604 5276461 R tellurium resistance protein TerC complement(5275604..5276461) Roseiflexus sp. RS-1 5211198 YP_001278507.1 CDS RoseRS_4214 NC_009523.1 5276681 5277973 D PFAM: adenylosuccinate synthetase; adenylosuccinate synthase 5276681..5277973 Roseiflexus sp. RS-1 5211199 YP_001278508.1 CDS RoseRS_4215 NC_009523.1 5278042 5278332 R hypothetical protein complement(5278042..5278332) Roseiflexus sp. RS-1 5211200 YP_001278509.1 CDS RoseRS_4216 NC_009523.1 5278436 5279404 R PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(5278436..5279404) Roseiflexus sp. RS-1 5211201 YP_001278510.1 CDS RoseRS_4217 NC_009523.1 5279615 5280658 D PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; GHMP kinase 5279615..5280658 Roseiflexus sp. RS-1 5211202 YP_001278511.1 CDS RoseRS_4218 NC_009523.1 5280728 5281351 D TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; histidinol-phosphate phosphatase family protein 5280728..5281351 Roseiflexus sp. RS-1 5211203 YP_001278512.1 CDS RoseRS_4219 NC_009523.1 5281488 5283545 D PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 5281488..5283545 Roseiflexus sp. RS-1 5211204 YP_001278513.1 CDS RoseRS_4220 NC_009523.1 5283542 5284267 D PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 5283542..5284267 Roseiflexus sp. RS-1 5211205 YP_001278514.1 CDS RoseRS_4221 NC_009523.1 5284319 5285824 D hypothetical protein 5284319..5285824 Roseiflexus sp. RS-1 5211206 YP_001278515.1 CDS RoseRS_4222 NC_009523.1 5285970 5287232 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 5285970..5287232 Roseiflexus sp. RS-1 5211207 YP_001278516.1 CDS RoseRS_4223 NC_009523.1 5287260 5289281 D hypothetical protein 5287260..5289281 Roseiflexus sp. RS-1 5211208 YP_001278517.1 CDS RoseRS_4224 NC_009523.1 5289867 5292332 D hypothetical protein 5289867..5292332 Roseiflexus sp. RS-1 5211209 YP_001278518.1 CDS RoseRS_4225 NC_009523.1 5292495 5294225 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 5292495..5294225 Roseiflexus sp. RS-1 5211210 YP_001278519.1 CDS RoseRS_4226 NC_009523.1 5294601 5295770 D hypothetical protein 5294601..5295770 Roseiflexus sp. RS-1 5211211 YP_001278520.1 CDS RoseRS_4227 NC_009523.1 5295855 5296976 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 5295855..5296976 Roseiflexus sp. RS-1 5211212 YP_001278521.1 CDS RoseRS_4228 NC_009523.1 5297006 5298466 D PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; polysaccharide biosynthesis protein 5297006..5298466 Roseiflexus sp. RS-1 5211213 YP_001278522.1 CDS RoseRS_4229 NC_009523.1 5298488 5299825 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 5298488..5299825 Roseiflexus sp. RS-1 5211214 YP_001278523.1 CDS RoseRS_4230 NC_009523.1 5299825 5300727 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 5299825..5300727 Roseiflexus sp. RS-1 5211215 YP_001278524.1 CDS RoseRS_4231 NC_009523.1 5300966 5302510 D hypothetical protein 5300966..5302510 Roseiflexus sp. RS-1 5211216 YP_001278525.1 CDS RoseRS_4232 NC_009523.1 5302520 5303692 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 5302520..5303692 Roseiflexus sp. RS-1 5211217 YP_001278526.1 CDS RoseRS_4233 NC_009523.1 5303703 5304920 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 5303703..5304920 Roseiflexus sp. RS-1 5211218 YP_001278527.1 CDS RoseRS_4234 NC_009523.1 5304954 5305886 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 5304954..5305886 Roseiflexus sp. RS-1 5211219 YP_001278528.1 CDS RoseRS_4235 NC_009523.1 5305909 5307333 D PFAM: O-antigen polymerase; O-antigen polymerase 5305909..5307333 Roseiflexus sp. RS-1 5211220 YP_001278529.1 CDS RoseRS_4236 NC_009523.1 5307338 5309050 D PFAM: glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase 5307338..5309050 Roseiflexus sp. RS-1 5211221 YP_001278530.1 CDS RoseRS_4237 NC_009523.1 5309410 5311176 D PFAM: Pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 5309410..5311176 Roseiflexus sp. RS-1 5211222 YP_001278531.1 CDS RoseRS_4238 NC_009523.1 5312472 5312735 R hypothetical protein complement(5312472..5312735) Roseiflexus sp. RS-1 5211223 YP_001278532.1 CDS RoseRS_4239 NC_009523.1 5313005 5314672 D hypothetical protein 5313005..5314672 Roseiflexus sp. RS-1 5211224 YP_001278533.1 CDS RoseRS_4240 NC_009523.1 5314676 5316184 D hypothetical protein 5314676..5316184 Roseiflexus sp. RS-1 5211225 YP_001278534.1 CDS RoseRS_4241 NC_009523.1 5316310 5317869 D glycosyltransferase 5316310..5317869 Roseiflexus sp. RS-1 5211226 YP_001278535.1 CDS RoseRS_4242 NC_009523.1 5317892 5318812 D hypothetical protein 5317892..5318812 Roseiflexus sp. RS-1 5211227 YP_001278536.1 CDS RoseRS_4243 NC_009523.1 5319223 5321364 D PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: Pyrrolo-quinoline quinone; tRNA/helicase-type nucleic acid binding protein 5319223..5321364 Roseiflexus sp. RS-1 5211228 YP_001278537.1 CDS RoseRS_4244 NC_009523.1 5322076 5326074 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; hypothetical protein 5322076..5326074 Roseiflexus sp. RS-1 5211229 YP_001278538.1 CDS RoseRS_4245 NC_009523.1 5326315 5327421 D PFAM: restriction endonuclease; SH3, type 3 domain protein; restriction endonuclease 5326315..5327421 Roseiflexus sp. RS-1 5211230 YP_001278539.1 CDS RoseRS_4246 NC_009523.1 5328420 5329655 R hypothetical protein complement(5328420..5329655) Roseiflexus sp. RS-1 5211231 YP_001278540.1 CDS RoseRS_4247 NC_009523.1 5329937 5331163 D PFAM: ROK family protein; regulatory protein, Crp; ROK family protein 5329937..5331163 Roseiflexus sp. RS-1 5211232 YP_001278541.1 CDS RoseRS_4248 NC_009523.1 5331359 5332744 D PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 5331359..5332744 Roseiflexus sp. RS-1 5211233 YP_001278542.1 CDS RoseRS_4249 NC_009523.1 5332815 5333813 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 5332815..5333813 Roseiflexus sp. RS-1 5211234 YP_001278543.1 CDS RoseRS_4250 NC_009523.1 5333827 5334687 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 5333827..5334687 Roseiflexus sp. RS-1 5211235 YP_001278544.1 CDS RoseRS_4251 NC_009523.1 5334701 5335441 D hypothetical protein 5334701..5335441 Roseiflexus sp. RS-1 5211236 YP_001278545.1 CDS RoseRS_4252 NC_009523.1 5335432 5336097 D hypothetical protein 5335432..5336097 Roseiflexus sp. RS-1 5211237 YP_001278546.1 CDS RoseRS_4253 NC_009523.1 5336117 5336899 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 5336117..5336899 Roseiflexus sp. RS-1 5211238 YP_001278547.1 CDS RoseRS_4254 NC_009523.1 5336930 5338117 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(5336930..5338117) Roseiflexus sp. RS-1 5211239 YP_001278548.1 CDS RoseRS_4255 NC_009523.1 5338322 5339260 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5338322..5339260 Roseiflexus sp. RS-1 5211240 YP_001278549.1 CDS RoseRS_4256 NC_009523.1 5339257 5340006 D PFAM: ABC-2 type transporter; ABC-2 type transporter 5339257..5340006 Roseiflexus sp. RS-1 5211241 YP_001278550.1 CDS RoseRS_4257 NC_009523.1 5340126 5341403 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 5340126..5341403 Roseiflexus sp. RS-1 5211242 YP_001278551.1 CDS RoseRS_4258 NC_009523.1 5341463 5342113 D PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator 5341463..5342113 Roseiflexus sp. RS-1 5211243 YP_001278552.1 CDS RoseRS_4259 NC_009523.1 5342211 5343020 D PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 5342211..5343020 Roseiflexus sp. RS-1 5211244 YP_001278553.1 CDS RoseRS_4260 NC_009523.1 5343024 5343605 R PFAM: protein of unknown function DUF218; hypothetical protein complement(5343024..5343605) Roseiflexus sp. RS-1 5211245 YP_001278554.1 CDS RoseRS_4261 NC_009523.1 5344326 5345009 R PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase complement(5344326..5345009) Roseiflexus sp. RS-1 5211246 YP_001278555.1 CDS RoseRS_4262 NC_009523.1 5345006 5345626 R PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase complement(5345006..5345626) Roseiflexus sp. RS-1 5211247 YP_001278556.1 CDS RoseRS_4263 NC_009523.1 5345631 5346821 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5345631..5346821) Roseiflexus sp. RS-1 5211248 YP_001278557.1 CDS RoseRS_4264 NC_009523.1 5346834 5347928 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5346834..5347928) Roseiflexus sp. RS-1 5211249 YP_001278558.1 CDS RoseRS_4265 NC_009523.1 5347943 5348881 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5347943..5348881) Roseiflexus sp. RS-1 5211250 YP_001278559.1 CDS RoseRS_4266 NC_009523.1 5348860 5350047 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5348860..5350047) Roseiflexus sp. RS-1 5211251 YP_001278560.1 CDS RoseRS_4267 NC_009523.1 5350032 5351252 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5350032..5351252) Roseiflexus sp. RS-1 5211252 YP_001278561.1 CDS RoseRS_4268 NC_009523.1 5351253 5352599 R PFAM: O-antigen polymerase; O-antigen polymerase complement(5351253..5352599) Roseiflexus sp. RS-1 5211253 YP_001278562.1 CDS RoseRS_4269 NC_009523.1 5352568 5353890 R PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(5352568..5353890) Roseiflexus sp. RS-1 5211254 YP_001278563.1 CDS RoseRS_4270 NC_009523.1 5353908 5355725 R PFAM: lipopolysaccharide biosynthesis protein; non-specific protein-tyrosine kinase complement(5353908..5355725) Roseiflexus sp. RS-1 5211255 YP_001278564.1 CDS RoseRS_4271 NC_009523.1 5355923 5356408 R PFAM: response regulator receiver; response regulator receiver protein complement(5355923..5356408) Roseiflexus sp. RS-1 5211256 YP_001278565.1 CDS RoseRS_4272 NC_009523.1 5356659 5359217 R hypothetical protein complement(5356659..5359217) Roseiflexus sp. RS-1 5211257 YP_001278566.1 CDS RoseRS_4275 NC_009523.1 5361556 5362236 R PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator complement(5361556..5362236) Roseiflexus sp. RS-1 5211259 YP_001278567.1 CDS RoseRS_4276 NC_009523.1 5362233 5363162 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; histidine kinase complement(5362233..5363162) Roseiflexus sp. RS-1 5211260 YP_001278568.1 CDS RoseRS_4277 NC_009523.1 5363421 5365493 R PFAM: Ig domain protein, group 1 domain protein; Ig domain-containing protein complement(5363421..5365493) Roseiflexus sp. RS-1 5211261 YP_001278569.1 CDS RoseRS_4278 NC_009523.1 5365689 5366552 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(5365689..5366552) Roseiflexus sp. RS-1 5211262 YP_001278570.1 CDS RoseRS_4279 NC_009523.1 5366557 5367024 D hypothetical protein 5366557..5367024 Roseiflexus sp. RS-1 5211263 YP_001278571.1 CDS RoseRS_4280 NC_009523.1 5367040 5368032 D PFAM: beta-lactamase; beta-lactamase 5367040..5368032 Roseiflexus sp. RS-1 5211264 YP_001278572.1 CDS RoseRS_4281 NC_009523.1 5368055 5368573 D PFAM: protein of unknown function DUF820; hypothetical protein 5368055..5368573 Roseiflexus sp. RS-1 5211265 YP_001278573.1 CDS RoseRS_4282 NC_009523.1 5368581 5369708 R PFAM: peptidase C60, sortase A and B; peptidase C60, sortase A and B complement(5368581..5369708) Roseiflexus sp. RS-1 5211266 YP_001278574.1 CDS RoseRS_4283 NC_009523.1 5370162 5370434 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 5370162..5370434 Roseiflexus sp. RS-1 5211267 YP_001278575.1 CDS RoseRS_4284 NC_009523.1 5370415 5371359 D PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 5370415..5371359 Roseiflexus sp. RS-1 5211268 YP_001278576.1 CDS RoseRS_4285 NC_009523.1 5372011 5373141 R PFAM: GHMP kinase, C terminal domain protein; GHMP kinase C terminal domain-containing protein complement(5372011..5373141) Roseiflexus sp. RS-1 5211269 YP_001278577.1 CDS RoseRS_4286 NC_009523.1 5373335 5374234 D similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 5373335..5374234 Roseiflexus sp. RS-1 5211270 YP_001278578.1 CDS RoseRS_4287 NC_009523.1 5374299 5375480 R PFAM: RNA binding S1 domain protein; RNA-binding S1 domain-containing protein complement(5374299..5375480) Roseiflexus sp. RS-1 5211271 YP_001278579.1 CDS RoseRS_4288 NC_009523.1 5375845 5376783 D PFAM: metalloenzyme domain protein; metalloenzyme domain-containing protein 5375845..5376783 Roseiflexus sp. RS-1 5211272 YP_001278580.1 CDS RoseRS_4289 NC_009523.1 5376780 5377616 D PFAM: ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase 5376780..5377616 Roseiflexus sp. RS-1 5211273 YP_001278581.1 CDS RoseRS_4290 NC_009523.1 5377733 5379553 R PFAM: TrkA-N domain protein; TrkA-C domain protein; TrkA domain-containing protein complement(5377733..5379553) Roseiflexus sp. RS-1 5211274 YP_001278582.1 CDS RoseRS_4291 NC_009523.1 5379565 5380314 R hypothetical protein complement(5379565..5380314) Roseiflexus sp. RS-1 5211275 YP_001278583.1 CDS RoseRS_4292 NC_009523.1 5380384 5389056 R PFAM: Cna B domain protein; Cna B domain-containing protein complement(5380384..5389056) Roseiflexus sp. RS-1 5211276 YP_001278584.1 CDS RoseRS_4293 NC_009523.1 5389244 5390725 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 5389244..5390725 Roseiflexus sp. RS-1 5211277 YP_001278585.1 CDS RoseRS_4294 NC_009523.1 5390745 5393360 R PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase complement(5390745..5393360) Roseiflexus sp. RS-1 5211278 YP_001278586.1 CDS RoseRS_4295 NC_009523.1 5394157 5394552 R hypothetical protein complement(5394157..5394552) Roseiflexus sp. RS-1 5211279 YP_001278587.1 CDS RoseRS_4296 NC_009523.1 5394667 5394882 R hypothetical protein complement(5394667..5394882) Roseiflexus sp. RS-1 5211280 YP_001278588.1 CDS RoseRS_4298 NC_009523.1 5395996 5396556 R PFAM: bifunctional deaminase-reductase domain protein; deaminase-reductase domain-containing protein complement(5395996..5396556) Roseiflexus sp. RS-1 5211282 YP_001278589.1 CDS RoseRS_4299 NC_009523.1 5396752 5396916 R hypothetical protein complement(5396752..5396916) Roseiflexus sp. RS-1 5211283 YP_001278590.1 CDS RoseRS_4300 NC_009523.1 5397018 5399627 D hypothetical protein 5397018..5399627 Roseiflexus sp. RS-1 5211284 YP_001278591.1 CDS RoseRS_4301 NC_009523.1 5399694 5401577 R molecular chaperone; heat shock protein 90 complement(5399694..5401577) Roseiflexus sp. RS-1 5211285 YP_001278592.1 CDS RoseRS_4302 NC_009523.1 5401790 5403223 R PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein complement(5401790..5403223) Roseiflexus sp. RS-1 5211286 YP_001278593.1 CDS RoseRS_4303 NC_009523.1 5403315 5406848 R PFAM: acriflavin resistance protein; acriflavin resistance protein complement(5403315..5406848) Roseiflexus sp. RS-1 5211287 YP_001278594.1 CDS RoseRS_4304 NC_009523.1 5407087 5407695 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 5407087..5407695 Roseiflexus sp. RS-1 5211288 YP_001278595.1 CDS RoseRS_4305 NC_009523.1 5408017 5409258 D dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein 5408017..5409258 Roseiflexus sp. RS-1 5211289 YP_001278596.1 CDS RoseRS_4306 NC_009523.1 5409293 5409556 R hypothetical protein complement(5409293..5409556) Roseiflexus sp. RS-1 5211290 YP_001278597.1 CDS RoseRS_4308 NC_009523.1 5410947 5411324 D hypothetical protein 5410947..5411324 Roseiflexus sp. RS-1 5211292 YP_001278598.1 CDS RoseRS_4309 NC_009523.1 5411387 5412742 D PFAM: beta-lactamase domain protein; Excalibur domain protein; beta-lactamase domain-containing protein 5411387..5412742 Roseiflexus sp. RS-1 5211293 YP_001278599.1 CDS RoseRS_4310 NC_009523.1 5412764 5413033 D hypothetical protein 5412764..5413033 Roseiflexus sp. RS-1 5211294 YP_001278600.1 CDS RoseRS_4311 NC_009523.1 5413179 5414855 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(5413179..5414855) Roseiflexus sp. RS-1 5211295 YP_001278601.1 CDS RoseRS_4312 NC_009523.1 5414896 5415339 R hypothetical protein complement(5414896..5415339) Roseiflexus sp. RS-1 5211296 YP_001278602.1 CDS RoseRS_4313 NC_009523.1 5415727 5416644 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 5415727..5416644 Roseiflexus sp. RS-1 5211297 YP_001278603.1 CDS RoseRS_4314 NC_009523.1 5416641 5417135 D hypothetical protein 5416641..5417135 Roseiflexus sp. RS-1 5211298 YP_001278604.1 CDS RoseRS_4315 NC_009523.1 5417207 5418259 R PFAM: oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase complement(5417207..5418259) Roseiflexus sp. RS-1 5211299 YP_001278605.1 CDS RoseRS_4316 NC_009523.1 5418379 5419014 R TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(5418379..5419014) Roseiflexus sp. RS-1 5211300 YP_001278606.1 CDS RoseRS_4317 NC_009523.1 5419021 5421012 R PFAM: amidohydrolase; Amidohydrolase 3; amidohydrolase complement(5419021..5421012) Roseiflexus sp. RS-1 5211301 YP_001278607.1 CDS RoseRS_4319 NC_009523.1 5421694 5422257 R hypothetical protein complement(5421694..5422257) Roseiflexus sp. RS-1 5211303 YP_001278608.1 CDS RoseRS_4320 NC_009523.1 5422278 5422610 R hypothetical protein complement(5422278..5422610) Roseiflexus sp. RS-1 5211304 YP_001278609.1 CDS RoseRS_4321 NC_009523.1 5422666 5423736 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; Sua5/YciO/YrdC/YwlC family protein complement(5422666..5423736) Roseiflexus sp. RS-1 5211305 YP_001278610.1 CDS RoseRS_4322 NC_009523.1 5423733 5424203 R PFAM: flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein complement(5423733..5424203) Roseiflexus sp. RS-1 5211306 YP_001278611.1 CDS RoseRS_4323 NC_009523.1 5424388 5425128 D PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; Helix-turn-helix, type 11 domain protein; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator 5424388..5425128 Roseiflexus sp. RS-1 5211307 YP_001278612.1 CDS RoseRS_4324 NC_009523.1 5425247 5427109 D hypothetical protein 5425247..5427109 Roseiflexus sp. RS-1 5211308 YP_001278613.1 CDS RoseRS_4325 NC_009523.1 5427109 5429184 D PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; 5-oxoprolinase 5427109..5429184 Roseiflexus sp. RS-1 5211309 YP_001278614.1 CDS RoseRS_4326 NC_009523.1 5429135 5429698 R PFAM: YceI family protein; hypothetical protein complement(5429135..5429698) Roseiflexus sp. RS-1 5211310 YP_001278615.1 CDS RoseRS_4327 NC_009523.1 5429765 5432854 R PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; transcriptional activator domain-containing protein complement(5429765..5432854) Roseiflexus sp. RS-1 5211311 YP_001278616.1 CDS RoseRS_4328 NC_009523.1 5433170 5434036 D hypothetical protein 5433170..5434036 Roseiflexus sp. RS-1 5211312 YP_001278617.1 CDS RoseRS_4329 NC_009523.1 5441848 5442138 R TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; CRISPR-associated Cas2 family protein complement(5441848..5442138) Roseiflexus sp. RS-1 5211313 YP_001278618.1 CDS RoseRS_4330 NC_009523.1 5442373 5443404 R TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated Cas1 family protein complement(5442373..5443404) Roseiflexus sp. RS-1 5211314 YP_001278619.1 CDS RoseRS_4331 NC_009523.1 5443523 5444191 R TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; CRISPR-associated Cas4 family protein complement(5443523..5444191) Roseiflexus sp. RS-1 5211315 YP_001278620.1 CDS RoseRS_4332 NC_009523.1 5444463 5445437 R TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family; PFAM: CRISPR-associated protein TM1801; CRISPR-associated Csd2 family protein complement(5444463..5445437) Roseiflexus sp. RS-1 5211316 YP_001278621.1 CDS RoseRS_4333 NC_009523.1 5445473 5447413 R TIGRFAM: CRISPR-associated protein, Csd1 family; CRISPR-associated RAMP Csd1 family protein complement(5445473..5447413) Roseiflexus sp. RS-1 5211317 YP_001278622.1 CDS RoseRS_4334 NC_009523.1 5447415 5448143 R TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; CRISPR-associated Cas5 family protein complement(5447415..5448143) Roseiflexus sp. RS-1 5211318 YP_001278623.1 CDS RoseRS_4335 NC_009523.1 5448155 5450869 R TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; CRISPR-associated helicase Cas3 complement(5448155..5450869) Roseiflexus sp. RS-1 5211319 YP_001278624.1 CDS RoseRS_4336 NC_009523.1 5451771 5452454 D PFAM: protein of unknown function DUF820; hypothetical protein 5451771..5452454 Roseiflexus sp. RS-1 5211320 YP_001278625.1 CDS RoseRS_4337 NC_009523.1 5452798 5453529 D hypothetical protein 5452798..5453529 Roseiflexus sp. RS-1 5211321 YP_001278626.1 CDS RoseRS_4338 NC_009523.1 5453532 5454515 D PFAM: metallophosphoesterase; metallophosphoesterase 5453532..5454515 Roseiflexus sp. RS-1 5211322 YP_001278627.1 CDS RoseRS_4339 NC_009523.1 5454572 5455225 D PFAM: cyclase family protein; cyclase family protein 5454572..5455225 Roseiflexus sp. RS-1 5211323 YP_001278628.1 CDS RoseRS_4340 NC_009523.1 5455239 5455685 D hypothetical protein 5455239..5455685 Roseiflexus sp. RS-1 5211324 YP_001278629.1 CDS RoseRS_4342 NC_009523.1 5456006 5456815 D PFAM: protein of unknown function DUF1037; hypothetical protein 5456006..5456815 Roseiflexus sp. RS-1 5211326 YP_001278630.1 CDS RoseRS_4343 NC_009523.1 5457076 5458596 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 5457076..5458596 Roseiflexus sp. RS-1 5211327 YP_001278631.1 CDS RoseRS_4344 NC_009523.1 5458593 5459591 D ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 5458593..5459591 Roseiflexus sp. RS-1 5211328 YP_001278632.1 CDS RoseRS_4345 NC_009523.1 5459569 5462856 R PFAM: transcriptional activator domain; SMART: Tetratricopeptide domain protein; transcriptional activator domain-containing protein complement(5459569..5462856) Roseiflexus sp. RS-1 5211329 YP_001278633.1 CDS RoseRS_4346 NC_009523.1 5462937 5463230 D hypothetical protein 5462937..5463230 Roseiflexus sp. RS-1 5211330 YP_001278634.1 CDS fabG NC_009523.1 5463282 5464025 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(5463282..5464025) Roseiflexus sp. RS-1 5211331 YP_001278635.1 CDS RoseRS_4348 NC_009523.1 5464182 5465372 R TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(5464182..5465372) Roseiflexus sp. RS-1 5211332 YP_001278636.1 CDS RoseRS_4349 NC_009523.1 5465807 5466370 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5465807..5466370 Roseiflexus sp. RS-1 5211333 YP_001278637.1 CDS RoseRS_4350 NC_009523.1 5466546 5467241 D PFAM: 2-phosphosulfolactate phosphatase; 2-phosphosulfolactate phosphatase 5466546..5467241 Roseiflexus sp. RS-1 5211334 YP_001278638.1 CDS RoseRS_4351 NC_009523.1 5467238 5469370 D hypothetical protein 5467238..5469370 Roseiflexus sp. RS-1 5211335 YP_001278639.1 CDS RoseRS_4352 NC_009523.1 5470235 5471398 D PFAM: protein of unknown function DUF711; hypothetical protein 5470235..5471398 Roseiflexus sp. RS-1 5211336 YP_001278640.1 CDS RoseRS_4355 NC_009523.1 5472414 5473409 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 5472414..5473409 Roseiflexus sp. RS-1 5211339 YP_001278641.1 CDS pgi NC_009523.1 5473413 5475044 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 5473413..5475044 Roseiflexus sp. RS-1 5211340 YP_001278642.1 CDS RoseRS_4357 NC_009523.1 5475237 5475806 D PFAM: protein of unknown function UPF0079; hypothetical protein 5475237..5475806 Roseiflexus sp. RS-1 5211341 YP_001278643.1 CDS RoseRS_4358 NC_009523.1 5475812 5476462 D PFAM: peptidase M22, glycoprotease; peptidase M22, glycoprotease 5475812..5476462 Roseiflexus sp. RS-1 5211342 YP_001278644.1 CDS RoseRS_4359 NC_009523.1 5476527 5478317 D PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase 5476527..5478317 Roseiflexus sp. RS-1 5211343 YP_001278645.1 CDS RoseRS_4360 NC_009523.1 5478404 5479114 D hypothetical protein 5478404..5479114 Roseiflexus sp. RS-1 5211344 YP_001278646.1 CDS RoseRS_4361 NC_009523.1 5479417 5481339 D TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 5479417..5481339 Roseiflexus sp. RS-1 5211345 YP_001278647.1 CDS RoseRS_4362 NC_009523.1 5481459 5482226 D PFAM: protein of unknown function DUF28; hypothetical protein 5481459..5482226 Roseiflexus sp. RS-1 5211346 YP_001278648.1 CDS ruvC NC_009523.1 5482230 5482736 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 5482230..5482736 Roseiflexus sp. RS-1 5211347 YP_001278649.1 CDS RoseRS_4364 NC_009523.1 5482854 5483621 R PFAM: SseB family protein; SseB family protein complement(5482854..5483621) Roseiflexus sp. RS-1 5211348 YP_001278650.1 CDS RoseRS_4365 NC_009523.1 5483708 5484082 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(5483708..5484082) Roseiflexus sp. RS-1 5211349 YP_001278651.1 CDS RoseRS_4366 NC_009523.1 5484105 5484572 R PFAM: transcription activator, effector binding; transcription activator, effector binding complement(5484105..5484572) Roseiflexus sp. RS-1 5211350 YP_001278652.1 CDS RoseRS_4367 NC_009523.1 5484731 5484964 R hypothetical protein complement(5484731..5484964) Roseiflexus sp. RS-1 5211351 YP_001278653.1 CDS RoseRS_4368 NC_009523.1 5484976 5485233 R hypothetical protein complement(5484976..5485233) Roseiflexus sp. RS-1 5211352 YP_001278654.1 CDS RoseRS_4371 NC_009523.1 5486039 5486302 R hypothetical protein complement(5486039..5486302) Roseiflexus sp. RS-1 5211355 YP_001278655.1 CDS RoseRS_4372 NC_009523.1 5486299 5486529 R hypothetical protein complement(5486299..5486529) Roseiflexus sp. RS-1 5211356 YP_001278656.1 CDS RoseRS_4373 NC_009523.1 5486910 5487215 D hypothetical protein 5486910..5487215 Roseiflexus sp. RS-1 5211357 YP_001278657.1 CDS RoseRS_4374 NC_009523.1 5487438 5487704 R hypothetical protein complement(5487438..5487704) Roseiflexus sp. RS-1 5211358 YP_001278658.1 CDS RoseRS_4375 NC_009523.1 5487940 5488167 R PFAM: protein of unknown function DUF433; hypothetical protein complement(5487940..5488167) Roseiflexus sp. RS-1 5211359 YP_001278659.1 CDS RoseRS_4376 NC_009523.1 5488272 5488574 R hypothetical protein complement(5488272..5488574) Roseiflexus sp. RS-1 5211360 YP_001278660.1 CDS RoseRS_4377 NC_009523.1 5489069 5489863 D hypothetical protein 5489069..5489863 Roseiflexus sp. RS-1 5211361 YP_001278661.1 CDS RoseRS_4378 NC_009523.1 5489893 5491188 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 5489893..5491188 Roseiflexus sp. RS-1 5211362 YP_001278662.1 CDS RoseRS_4379 NC_009523.1 5491698 5492249 R hypothetical protein complement(5491698..5492249) Roseiflexus sp. RS-1 5211363 YP_001278663.1 CDS RoseRS_4380 NC_009523.1 5492583 5493290 R hypothetical protein complement(5492583..5493290) Roseiflexus sp. RS-1 5211364 YP_001278664.1 CDS RoseRS_4381 NC_009523.1 5494008 5494673 D PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 5494008..5494673 Roseiflexus sp. RS-1 5211365 YP_001278665.1 CDS RoseRS_4382 NC_009523.1 5494678 5494965 D hypothetical protein 5494678..5494965 Roseiflexus sp. RS-1 5211366 YP_001278666.1 CDS RoseRS_4383 NC_009523.1 5495813 5497420 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5495813..5497420) Roseiflexus sp. RS-1 5211367 YP_001278667.1 CDS RoseRS_4384 NC_009523.1 5497665 5498312 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5497665..5498312 Roseiflexus sp. RS-1 5211368 YP_001278668.1 CDS RoseRS_4385 NC_009523.1 5498367 5499632 D PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase 5498367..5499632 Roseiflexus sp. RS-1 5211369 YP_001278669.1 CDS RoseRS_4386 NC_009523.1 5499803 5500204 D PFAM: response regulator receiver; response regulator receiver protein 5499803..5500204 Roseiflexus sp. RS-1 5211370 YP_001278670.1 CDS RoseRS_4387 NC_009523.1 5500208 5500786 R hypothetical protein complement(5500208..5500786) Roseiflexus sp. RS-1 5211371 YP_001278671.1 CDS RoseRS_4388 NC_009523.1 5500809 5501546 R hypothetical protein complement(5500809..5501546) Roseiflexus sp. RS-1 5211372 YP_001278672.1 CDS RoseRS_4389 NC_009523.1 5501599 5502204 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(5501599..5502204) Roseiflexus sp. RS-1 5211373 YP_001278673.1 CDS RoseRS_4390 NC_009523.1 5502294 5504681 R PFAM: ATP-binding region, ATPase domain protein domain protein; putative signal transduction histidine kinase complement(5502294..5504681) Roseiflexus sp. RS-1 5211374 YP_001278674.1 CDS RoseRS_4391 NC_009523.1 5505285 5506769 D PFAM: O-antigen polymerase; O-antigen polymerase 5505285..5506769 Roseiflexus sp. RS-1 5211375 YP_001278675.1 CDS RoseRS_4392 NC_009523.1 5506957 5507823 D PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; methylenetetrahydrofolate dehydrogenase 5506957..5507823 Roseiflexus sp. RS-1 5211376 YP_001278676.1 CDS RoseRS_4393 NC_009523.1 5508091 5509155 D PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; nucleotidyl transferase 5508091..5509155 Roseiflexus sp. RS-1 5211378 YP_001278677.1 CDS RoseRS_4394 NC_009523.1 5509161 5510099 D TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 5509161..5510099 Roseiflexus sp. RS-1 5211379 YP_001278678.1 CDS RoseRS_4395 NC_009523.1 5510143 5511462 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein 5510143..5511462 Roseiflexus sp. RS-1 5211380 YP_001278679.1 CDS RoseRS_4396 NC_009523.1 5511443 5511853 D TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; Cytidine and deoxycytidylate deaminase, zinc-binding domain protein; cytidine deaminase 5511443..5511853 Roseiflexus sp. RS-1 5211381 YP_001278680.1 CDS RoseRS_4397 NC_009523.1 5511861 5514359 R PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; nucleotidyl transferase complement(5511861..5514359) Roseiflexus sp. RS-1 5211382 YP_001278681.1 CDS RoseRS_4398 NC_009523.1 5514635 5515024 R hypothetical protein complement(5514635..5515024) Roseiflexus sp. RS-1 5211383 YP_001278682.1 CDS RoseRS_4399 NC_009523.1 5515212 5516138 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 5515212..5516138 Roseiflexus sp. RS-1 5211384 YP_001278683.1 CDS RoseRS_4400 NC_009523.1 5516244 5518289 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase complement(5516244..5518289) Roseiflexus sp. RS-1 5211385 YP_001278684.1 CDS RoseRS_4401 NC_009523.1 5518426 5519670 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 5518426..5519670 Roseiflexus sp. RS-1 5211386 YP_001278685.1 CDS RoseRS_4402 NC_009523.1 5519764 5521410 D hypothetical protein 5519764..5521410 Roseiflexus sp. RS-1 5211387 YP_001278686.1 CDS RoseRS_4403 NC_009523.1 5521382 5522443 D PFAM: protein of unknown function DUF1058; SH3, type 3 domain protein; SH3 type 3 domain-containing protein 5521382..5522443 Roseiflexus sp. RS-1 5211388 YP_001278687.1 CDS RoseRS_4404 NC_009523.1 5522447 5523199 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(5522447..5523199) Roseiflexus sp. RS-1 5211389 YP_001278688.1 CDS RoseRS_4405 NC_009523.1 5523269 5524234 R PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; hypothetical protein complement(5523269..5524234) Roseiflexus sp. RS-1 5211390 YP_001278689.1 CDS RoseRS_4406 NC_009523.1 5524445 5525578 D TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 5524445..5525578 Roseiflexus sp. RS-1 5211391 YP_001278690.1 CDS RoseRS_4407 NC_009523.1 5525587 5525931 D hypothetical protein 5525587..5525931 Roseiflexus sp. RS-1 5211392 YP_001278691.1 CDS RoseRS_4408 NC_009523.1 5525948 5526220 D hypothetical protein 5525948..5526220 Roseiflexus sp. RS-1 5211393 YP_001278692.1 CDS RoseRS_4409 NC_009523.1 5526545 5528407 D PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 5526545..5528407 Roseiflexus sp. RS-1 5211394 YP_001278693.1 CDS RoseRS_4410 NC_009523.1 5528510 5529577 R hypothetical protein complement(5528510..5529577) Roseiflexus sp. RS-1 5211395 YP_001278694.1 CDS RoseRS_4411 NC_009523.1 5529611 5531602 R hypothetical protein complement(5529611..5531602) Roseiflexus sp. RS-1 5211396 YP_001278695.1 CDS RoseRS_4412 NC_009523.1 5531612 5532523 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(5531612..5532523) Roseiflexus sp. RS-1 5211397 YP_001278696.1 CDS RoseRS_4413 NC_009523.1 5532520 5533500 R hypothetical protein complement(5532520..5533500) Roseiflexus sp. RS-1 5211398 YP_001278697.1 CDS RoseRS_4414 NC_009523.1 5533532 5534725 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5533532..5534725) Roseiflexus sp. RS-1 5211399 YP_001278698.1 CDS RoseRS_4415 NC_009523.1 5534769 5535788 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5534769..5535788) Roseiflexus sp. RS-1 5211400 YP_001278699.1 CDS RoseRS_4416 NC_009523.1 5535887 5537134 R hypothetical protein complement(5535887..5537134) Roseiflexus sp. RS-1 5211401 YP_001278700.1 CDS RoseRS_4417 NC_009523.1 5537513 5537926 R PFAM: protein of unknown function DUF86; hypothetical protein complement(5537513..5537926) Roseiflexus sp. RS-1 5211402 YP_001278701.1 CDS RoseRS_4418 NC_009523.1 5537880 5538326 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(5537880..5538326) Roseiflexus sp. RS-1 5211403 YP_001278702.1 CDS RoseRS_4419 NC_009523.1 5538778 5540775 R TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; asparagine synthase complement(5538778..5540775) Roseiflexus sp. RS-1 5211404 YP_001278703.1 CDS RoseRS_4420 NC_009523.1 5540954 5541310 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(5540954..5541310) Roseiflexus sp. RS-1 5211405 YP_001278704.1 CDS RoseRS_4421 NC_009523.1 5541433 5542695 R hypothetical protein complement(5541433..5542695) Roseiflexus sp. RS-1 5211406 YP_001278705.1 CDS RoseRS_4422 NC_009523.1 5542689 5543711 R hypothetical protein complement(5542689..5543711) Roseiflexus sp. RS-1 5211407 YP_001278706.1 CDS RoseRS_4424 NC_009523.1 5544626 5545345 R PFAM: Methyltransferase type 11; type 11 methyltransferase complement(5544626..5545345) Roseiflexus sp. RS-1 5211409 YP_001278707.1 CDS RoseRS_4425 NC_009523.1 5545386 5546174 R PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; type 11 methyltransferase complement(5545386..5546174) Roseiflexus sp. RS-1 5211410 YP_001278708.1 CDS RoseRS_4426 NC_009523.1 5546174 5547457 R PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(5546174..5547457) Roseiflexus sp. RS-1 5211411 YP_001278709.1 CDS RoseRS_4427 NC_009523.1 5547771 5548643 R PFAM: protein of unknown function DUF820; hypothetical protein complement(5547771..5548643) Roseiflexus sp. RS-1 5211412 YP_001278710.1 CDS RoseRS_4428 NC_009523.1 5548784 5550535 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; S23 ribosomal protein; glutamine--scyllo-inositol transaminase complement(5548784..5550535) Roseiflexus sp. RS-1 5211413 YP_001278711.1 CDS RoseRS_4429 NC_009523.1 5550751 5551374 R PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase complement(5550751..5551374) Roseiflexus sp. RS-1 5211414 YP_001278712.1 CDS RoseRS_4430 NC_009523.1 5551631 5552713 R PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(5551631..5552713) Roseiflexus sp. RS-1 5211415 YP_001278713.1 CDS RoseRS_4431 NC_009523.1 5552718 5553722 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(5552718..5553722) Roseiflexus sp. RS-1 5211416 YP_001278714.1 CDS RoseRS_4432 NC_009523.1 5553888 5555177 R hypothetical protein complement(5553888..5555177) Roseiflexus sp. RS-1 5211417 YP_001278715.1 CDS RoseRS_4433 NC_009523.1 5555222 5556802 R hypothetical protein complement(5555222..5556802) Roseiflexus sp. RS-1 5211418 YP_001278716.1 CDS RoseRS_4434 NC_009523.1 5556818 5558176 R hypothetical protein complement(5556818..5558176) Roseiflexus sp. RS-1 5211419 YP_001278717.1 CDS RoseRS_4435 NC_009523.1 5558310 5559053 R PFAM: Methyltransferase type 11; type 11 methyltransferase complement(5558310..5559053) Roseiflexus sp. RS-1 5211420 YP_001278718.1 CDS RoseRS_4436 NC_009523.1 5559117 5560445 R glycosyltransferase-like protein complement(5559117..5560445) Roseiflexus sp. RS-1 5211421 YP_001278719.1 CDS RoseRS_4437 NC_009523.1 5560442 5561437 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5560442..5561437) Roseiflexus sp. RS-1 5211422 YP_001278720.1 CDS RoseRS_4438 NC_009523.1 5561573 5562685 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5561573..5562685) Roseiflexus sp. RS-1 5211423 YP_001278721.1 CDS RoseRS_4439 NC_009523.1 5562690 5564594 R TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; asparagine synthase complement(5562690..5564594) Roseiflexus sp. RS-1 5211424 YP_001278722.1 CDS RoseRS_4440 NC_009523.1 5564606 5565355 R PFAM: protein of unknown function DUF820; hypothetical protein complement(5564606..5565355) Roseiflexus sp. RS-1 5211425 YP_001278723.1 CDS RoseRS_4441 NC_009523.1 5565409 5566266 R PFAM: protein of unknown function DUF820; hypothetical protein complement(5565409..5566266) Roseiflexus sp. RS-1 5211426 YP_001278724.1 CDS RoseRS_4442 NC_009523.1 5566326 5567057 R PFAM: protein of unknown function DUF820; hypothetical protein complement(5566326..5567057) Roseiflexus sp. RS-1 5211427 YP_001278725.1 CDS RoseRS_4443 NC_009523.1 5567117 5567911 R PFAM: protein of unknown function DUF820; hypothetical protein complement(5567117..5567911) Roseiflexus sp. RS-1 5211428 YP_001278726.1 CDS RoseRS_4444 NC_009523.1 5567971 5568975 R PFAM: protein of unknown function DUF820; hypothetical protein complement(5567971..5568975) Roseiflexus sp. RS-1 5211429 YP_001278727.1 CDS RoseRS_4445 NC_009523.1 5569035 5569931 R PFAM: protein of unknown function DUF820; hypothetical protein complement(5569035..5569931) Roseiflexus sp. RS-1 5211430 YP_001278728.1 CDS RoseRS_4446 NC_009523.1 5569855 5571135 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5569855..5571135) Roseiflexus sp. RS-1 5211431 YP_001278729.1 CDS RoseRS_4447 NC_009523.1 5571198 5572292 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5571198..5572292) Roseiflexus sp. RS-1 5211432 YP_001278730.1 CDS RoseRS_4448 NC_009523.1 5572345 5573631 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5572345..5573631) Roseiflexus sp. RS-1 5211433 YP_001278731.1 CDS RoseRS_4449 NC_009523.1 5573953 5574600 D PFAM: 4-vinyl reductase, 4VR; 4-vinyl reductase, 4VR 5573953..5574600 Roseiflexus sp. RS-1 5211434 YP_001278732.1 CDS RoseRS_4450 NC_009523.1 5574940 5576337 D N-acetylglucosamine-1-phosphate uridyltransferase 5574940..5576337 Roseiflexus sp. RS-1 5211435 YP_001278733.1 CDS RoseRS_4451 NC_009523.1 5576349 5577293 D PFAM: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase 5576349..5577293 Roseiflexus sp. RS-1 5211436 YP_001278734.1 CDS RoseRS_4452 NC_009523.1 5577357 5583818 D TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 5577357..5583818 Roseiflexus sp. RS-1 5211437 YP_001278735.1 CDS RoseRS_4453 NC_009523.1 5583815 5584654 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5583815..5584654 Roseiflexus sp. RS-1 5211438 YP_001278736.1 CDS RoseRS_4454 NC_009523.1 5584654 5585691 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 5584654..5585691 Roseiflexus sp. RS-1 5211439 YP_001278737.1 CDS RoseRS_4455 NC_009523.1 5586353 5587315 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 complement(5586353..5587315) Roseiflexus sp. RS-1 5211440 YP_001278738.1 CDS RoseRS_4456 NC_009523.1 5588278 5589531 R hypothetical protein complement(5588278..5589531) Roseiflexus sp. RS-1 5211441 YP_001278739.1 CDS RoseRS_4457 NC_009523.1 5590397 5592589 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 5590397..5592589 Roseiflexus sp. RS-1 5211442 YP_001278740.1 CDS RoseRS_4458 NC_009523.1 5593258 5594001 D PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 5593258..5594001 Roseiflexus sp. RS-1 5211443 YP_001278741.1 CDS RoseRS_4459 NC_009523.1 5594035 5595447 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF162; iron-sulfur cluster binding protein 5594035..5595447 Roseiflexus sp. RS-1 5211444 YP_001278742.1 CDS RoseRS_4460 NC_009523.1 5595451 5597886 D PFAM: glycoside hydrolase, family 57; glycoside hydrolase family protein 5595451..5597886 Roseiflexus sp. RS-1 5211445 YP_001278743.1 CDS RoseRS_4461 NC_009523.1 5597997 5598602 D PFAM: protein of unknown function DUF820; hypothetical protein 5597997..5598602 Roseiflexus sp. RS-1 5211446 YP_001278744.1 CDS RoseRS_4462 NC_009523.1 5598615 5599418 R hypothetical protein complement(5598615..5599418) Roseiflexus sp. RS-1 5211447 YP_001278745.1 CDS RoseRS_4463 NC_009523.1 5599438 5599911 R hypothetical protein complement(5599438..5599911) Roseiflexus sp. RS-1 5211448 YP_001278746.1 CDS RoseRS_4464 NC_009523.1 5599964 5600284 R hypothetical protein complement(5599964..5600284) Roseiflexus sp. RS-1 5211449 YP_001278747.1 CDS RoseRS_4465 NC_009523.1 5600281 5601090 R PFAM: Methyltransferase type 11; type 11 methyltransferase complement(5600281..5601090) Roseiflexus sp. RS-1 5211450 YP_001278748.1 CDS RoseRS_4466 NC_009523.1 5601142 5601360 R hypothetical protein complement(5601142..5601360) Roseiflexus sp. RS-1 5211451 YP_001278749.1 CDS RoseRS_4467 NC_009523.1 5601374 5601682 R hypothetical protein complement(5601374..5601682) Roseiflexus sp. RS-1 5211452 YP_001278750.1 CDS RoseRS_4468 NC_009523.1 5601698 5604037 R PFAM: iron permease FTR1; iron permease FTR1 complement(5601698..5604037) Roseiflexus sp. RS-1 5211453 YP_001278751.1 CDS RoseRS_4469 NC_009523.1 5604105 5605190 R hypothetical protein complement(5604105..5605190) Roseiflexus sp. RS-1 5211454 YP_001278752.1 CDS RoseRS_4470 NC_009523.1 5605542 5606792 D TIGRFAM: kynureninase; PFAM: aminotransferase, class V; kynureninase 5605542..5606792 Roseiflexus sp. RS-1 5211455 YP_001278753.1 CDS RoseRS_4471 NC_009523.1 5607007 5608140 D hypothetical protein 5607007..5608140 Roseiflexus sp. RS-1 5211456 YP_001278754.1 CDS RoseRS_4472 NC_009523.1 5608152 5609381 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cystathionine gamma-synthase complement(5608152..5609381) Roseiflexus sp. RS-1 5211457 YP_001278755.1 CDS RoseRS_4473 NC_009523.1 5609636 5610943 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 5609636..5610943 Roseiflexus sp. RS-1 5211458 YP_001278756.1 CDS RoseRS_4474 NC_009523.1 5611171 5612547 R PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein complement(5611171..5612547) Roseiflexus sp. RS-1 5211459 YP_001278757.1 CDS RoseRS_4475 NC_009523.1 5612779 5613600 D PFAM: HpcH/HpaI aldolase; HpcH/HpaI aldolase 5612779..5613600 Roseiflexus sp. RS-1 5211460 YP_001278758.1 CDS RoseRS_4476 NC_009523.1 5613778 5614410 D PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 5613778..5614410 Roseiflexus sp. RS-1 5211461 YP_001278759.1 CDS RoseRS_4477 NC_009523.1 5614432 5615223 R PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein complement(5614432..5615223) Roseiflexus sp. RS-1 5211462 YP_001278760.1 CDS RoseRS_4478 NC_009523.1 5615401 5616687 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(5615401..5616687) Roseiflexus sp. RS-1 5211463 YP_001278761.1 CDS RoseRS_4479 NC_009523.1 5617480 5618085 R hypothetical protein complement(5617480..5618085) Roseiflexus sp. RS-1 5211464 YP_001278762.1 CDS RoseRS_4480 NC_009523.1 5618349 5618783 R hypothetical protein complement(5618349..5618783) Roseiflexus sp. RS-1 5211465 YP_001278763.1 CDS RoseRS_4481 NC_009523.1 5618873 5620057 R hypothetical protein complement(5618873..5620057) Roseiflexus sp. RS-1 5211466 YP_001278764.1 CDS RoseRS_4482 NC_009523.1 5620182 5622338 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; multi-sensor signal transduction histidine kinase complement(5620182..5622338) Roseiflexus sp. RS-1 5211467 YP_001278765.1 CDS RoseRS_4483 NC_009523.1 5622399 5623079 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(5622399..5623079) Roseiflexus sp. RS-1 5211468 YP_001278766.1 CDS RoseRS_4484 NC_009523.1 5623159 5623923 D hypothetical protein 5623159..5623923 Roseiflexus sp. RS-1 5211469 YP_001278767.1 CDS RoseRS_4485 NC_009523.1 5623920 5624522 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase 5623920..5624522 Roseiflexus sp. RS-1 5211470 YP_001278768.1 CDS RoseRS_4486 NC_009523.1 5624535 5625392 D hypothetical protein 5624535..5625392 Roseiflexus sp. RS-1 5211471 YP_001278769.1 CDS RoseRS_4487 NC_009523.1 5626387 5626623 R hypothetical protein complement(5626387..5626623) Roseiflexus sp. RS-1 5211472 YP_001278770.1 CDS RoseRS_4488 NC_009523.1 5627086 5627976 D hypothetical protein 5627086..5627976 Roseiflexus sp. RS-1 5211473 YP_001278771.1 CDS RoseRS_4489 NC_009523.1 5628318 5629322 D PFAM: periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 5628318..5629322 Roseiflexus sp. RS-1 5211474 YP_001278772.1 CDS RoseRS_4490 NC_009523.1 5629319 5630854 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase, HAMP region domain protein; anti-sigma-factor antagonist 5629319..5630854 Roseiflexus sp. RS-1 5211475 YP_001278773.1 CDS RoseRS_4491 NC_009523.1 5630839 5631219 R hypothetical protein complement(5630839..5631219) Roseiflexus sp. RS-1 5211476 YP_001278774.1 CDS RoseRS_4492 NC_009523.1 5631244 5632209 R hypothetical protein complement(5631244..5632209) Roseiflexus sp. RS-1 5211477 YP_001278775.1 CDS RoseRS_4493 NC_009523.1 5632845 5633771 R hypothetical protein complement(5632845..5633771) Roseiflexus sp. RS-1 5211478 YP_001278776.1 CDS RoseRS_4494 NC_009523.1 5633803 5635221 R hypothetical protein complement(5633803..5635221) Roseiflexus sp. RS-1 5211479 YP_001278777.1 CDS RoseRS_4495 NC_009523.1 5635218 5635556 R hypothetical protein complement(5635218..5635556) Roseiflexus sp. RS-1 5211480 YP_001278778.1 CDS RoseRS_4497 NC_009523.1 5637472 5638626 R hypothetical protein complement(5637472..5638626) Roseiflexus sp. RS-1 5211482 YP_001278779.1 CDS RoseRS_4498 NC_009523.1 5638830 5640086 R hypothetical protein complement(5638830..5640086) Roseiflexus sp. RS-1 5211483 YP_001278780.1 CDS RoseRS_4499 NC_009523.1 5640404 5642065 R PFAM: regulator of chromosome condensation, RCC1; regulator of chromosome condensation, RCC1 complement(5640404..5642065) Roseiflexus sp. RS-1 5211484 YP_001278781.1 CDS RoseRS_4500 NC_009523.1 5642573 5643913 R hypothetical protein complement(5642573..5643913) Roseiflexus sp. RS-1 5211485 YP_001278782.1 CDS RoseRS_4501 NC_009523.1 5643993 5644526 R hypothetical protein complement(5643993..5644526) Roseiflexus sp. RS-1 5211486 YP_001278783.1 CDS RoseRS_4502 NC_009523.1 5645213 5646388 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 5645213..5646388 Roseiflexus sp. RS-1 5211487 YP_001278784.1 CDS RoseRS_4503 NC_009523.1 5646425 5647090 D PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator 5646425..5647090 Roseiflexus sp. RS-1 5211488 YP_001278785.1 CDS RoseRS_4504 NC_009523.1 5647153 5647719 R hypothetical protein complement(5647153..5647719) Roseiflexus sp. RS-1 5211489 YP_001278786.1 CDS RoseRS_4505 NC_009523.1 5648656 5649234 R hypothetical protein complement(5648656..5649234) Roseiflexus sp. RS-1 5211490 YP_001278787.1 CDS RoseRS_4506 NC_009523.1 5649431 5649871 D TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; nucleotidyltransferase substrate-binding protein 5649431..5649871 Roseiflexus sp. RS-1 5211491 YP_001278788.1 CDS RoseRS_4507 NC_009523.1 5649875 5650186 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 5649875..5650186 Roseiflexus sp. RS-1 5211492 YP_001278789.1 CDS RoseRS_4508 NC_009523.1 5650260 5651486 D PFAM: protein of unknown function UPF0027; hypothetical protein 5650260..5651486 Roseiflexus sp. RS-1 5211493 YP_001278790.1 CDS RoseRS_4509 NC_009523.1 5651944 5653197 D hypothetical protein 5651944..5653197 Roseiflexus sp. RS-1 5211494 YP_001278791.1 CDS RoseRS_4510 NC_009523.1 5654062 5655456 R PFAM: Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; ferrous iron transport B domain-containing protein complement(5654062..5655456) Roseiflexus sp. RS-1 5211495 YP_001278792.1 CDS RoseRS_4511 NC_009523.1 5655456 5656286 R TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; small GTP-binding protein complement(5655456..5656286) Roseiflexus sp. RS-1 5211496 YP_001278793.1 CDS RoseRS_4512 NC_009523.1 5656321 5657331 R PFAM: iron dependent repressor; FeoA family protein; iron dependent repressor complement(5656321..5657331) Roseiflexus sp. RS-1 5211497 YP_001278794.1 CDS RoseRS_4513 NC_009523.1 5657616 5658455 D PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 5657616..5658455 Roseiflexus sp. RS-1 5211498 YP_001278795.1 CDS RoseRS_4514 NC_009523.1 5658953 5659915 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 5658953..5659915 Roseiflexus sp. RS-1 5211499 YP_001278796.1 CDS RoseRS_4515 NC_009523.1 5660060 5662240 D TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: NAD-dependent DNA ligase-like; DNA ligase 5660060..5662240 Roseiflexus sp. RS-1 5211500 YP_001278797.1 CDS RoseRS_4516 NC_009523.1 5662253 5663185 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5662253..5663185 Roseiflexus sp. RS-1 5211501 YP_001278798.1 CDS RoseRS_4517 NC_009523.1 5664017 5664979 D PFAM: transposase, IS111A/IS1328/IS1533; transposase, IS111A/IS1328/IS1533 5664017..5664979 Roseiflexus sp. RS-1 5211502 YP_001278799.1 CDS RoseRS_4518 NC_009523.1 5665210 5666250 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5665210..5666250) Roseiflexus sp. RS-1 5211503 YP_001278800.1 CDS RoseRS_4519 NC_009523.1 5666353 5667870 D TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 5666353..5667870 Roseiflexus sp. RS-1 5211504 YP_001278801.1 CDS RoseRS_4520 NC_009523.1 5668030 5668560 D PFAM: thioesterase superfamily protein; thioesterase superfamily protein 5668030..5668560 Roseiflexus sp. RS-1 5211505 YP_001278802.1 CDS RoseRS_4521 NC_009523.1 5669029 5669892 D PFAM: amidinotransferase; amidinotransferase 5669029..5669892 Roseiflexus sp. RS-1 5211506 YP_001278803.1 CDS RoseRS_4522 NC_009523.1 5669897 5671183 D TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase 5669897..5671183 Roseiflexus sp. RS-1 5211507 YP_001278804.1 CDS RoseRS_4523 NC_009523.1 5671322 5671942 R PFAM: BioY protein; BioY protein complement(5671322..5671942) Roseiflexus sp. RS-1 5211508 YP_001278805.1 CDS RoseRS_4524 NC_009523.1 5672111 5673121 D PFAM: glycosyl transferase, family 4; glycosyl transferase family protein 5672111..5673121 Roseiflexus sp. RS-1 5211509 YP_001278806.1 CDS RoseRS_4525 NC_009523.1 5673481 5674644 D hypothetical protein 5673481..5674644 Roseiflexus sp. RS-1 5211510 YP_001278807.1 CDS RoseRS_4526 NC_009523.1 5674917 5675867 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5674917..5675867 Roseiflexus sp. RS-1 5211511 YP_001278808.1 CDS RoseRS_4527 NC_009523.1 5675940 5677955 R PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(5675940..5677955) Roseiflexus sp. RS-1 5211512 YP_001278809.1 CDS RoseRS_4528 NC_009523.1 5678323 5678781 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 5678323..5678781 Roseiflexus sp. RS-1 5211513 YP_001278810.1 CDS RoseRS_4529 NC_009523.1 5678756 5679154 D PFAM: protein of unknown function DUF86; hypothetical protein 5678756..5679154 Roseiflexus sp. RS-1 5211514 YP_001278811.1 CDS RoseRS_4530 NC_009523.1 5679360 5680034 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 5679360..5680034 Roseiflexus sp. RS-1 5211515 YP_001278812.1 CDS RoseRS_4531 NC_009523.1 5680040 5680582 D putative transmembrane anti-sigma factor 5680040..5680582 Roseiflexus sp. RS-1 5211516 YP_001278813.1 CDS eno NC_009523.1 5680770 5682059 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(5680770..5682059) Roseiflexus sp. RS-1 5211517 YP_001278814.1 CDS RoseRS_4533 NC_009523.1 5682194 5683267 R PFAM: DRTGG domain protein; DRTGG domain-containing protein complement(5682194..5683267) Roseiflexus sp. RS-1 5211518 YP_001278815.1 CDS RoseRS_4534 NC_009523.1 5683312 5685408 R PFAM: CoA-binding domain protein; ATP-grasp domain protein; CoA-binding domain-containing protein complement(5683312..5685408) Roseiflexus sp. RS-1 5211519 YP_001278816.1 CDS leuS NC_009523.1 5685581 5688295 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(5685581..5688295) Roseiflexus sp. RS-1 5211520 YP_001278817.1 CDS RoseRS_4536 NC_009523.1 5688337 5689116 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(5688337..5689116) Roseiflexus sp. RS-1 5211521 YP_001278818.1 CDS RoseRS_4537 NC_009523.1 5689274 5690257 R TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(5689274..5690257) Roseiflexus sp. RS-1 5211522 YP_001278819.1 CDS RoseRS_4538 NC_009523.1 5690573 5691544 D PFAM: aldo/keto reductase; aldo/keto reductase 5690573..5691544 Roseiflexus sp. RS-1 5211523 YP_001278820.1 CDS RoseRS_4539 NC_009523.1 5691633 5692445 D hypothetical protein 5691633..5692445 Roseiflexus sp. RS-1 5211524 YP_001278821.1 CDS RoseRS_4540 NC_009523.1 5692483 5694588 R TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; elongation factor G, domain IV; translation elongation factor G complement(5692483..5694588) Roseiflexus sp. RS-1 5211525 YP_001278822.1 CDS RoseRS_4541 NC_009523.1 5694764 5696125 R TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(5694764..5696125) Roseiflexus sp. RS-1 5211526 YP_001278823.1 CDS RoseRS_4542 NC_009523.1 5696267 5698378 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase 5696267..5698378 Roseiflexus sp. RS-1 5211527 YP_001278824.1 CDS RoseRS_4543 NC_009523.1 5698375 5698905 D PFAM: shikimate kinase; shikimate kinase 5698375..5698905 Roseiflexus sp. RS-1 5211528 YP_001278825.1 CDS RoseRS_4544 NC_009523.1 5699068 5700012 D hypothetical protein 5699068..5700012 Roseiflexus sp. RS-1 5211529 YP_001278826.1 CDS RoseRS_4545 NC_009523.1 5700132 5701190 D PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 5700132..5701190 Roseiflexus sp. RS-1 5211530 YP_001278827.1 CDS RoseRS_4546 NC_009523.1 5701258 5703330 R PFAM: Cna B domain protein; Cna B domain-containing protein complement(5701258..5703330) Roseiflexus sp. RS-1 5211531 YP_001278828.1 CDS RoseRS_4547 NC_009523.1 5703499 5704911 D PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; protein phosphatase 2C domain-containing protein 5703499..5704911 Roseiflexus sp. RS-1 5211532 YP_001278829.1 CDS RoseRS_4548 NC_009523.1 5704969 5706786 D TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region, ATPase domain protein domain protein; DNA mismatch repair protein, C-terminal domain protein; DNA mismatch repair protein MutL 5704969..5706786 Roseiflexus sp. RS-1 5211533 YP_001278830.1 CDS RoseRS_4549 NC_009523.1 5706779 5707489 R PFAM: regulatory protein, MarR; iron dependent repressor; FeoA family protein; iron dependent repressor complement(5706779..5707489) Roseiflexus sp. RS-1 5211534 YP_001278831.1 CDS RoseRS_4550 NC_009523.1 5707520 5707867 R PFAM: protein of unknown function DUF952; hypothetical protein complement(5707520..5707867) Roseiflexus sp. RS-1 5211535 YP_001278832.1 CDS RoseRS_4551 NC_009523.1 5707864 5709390 R PFAM: carbohydrate kinase, FGGY; carbohydrate kinase FGGY complement(5707864..5709390) Roseiflexus sp. RS-1 5211536 YP_001278833.1 CDS RoseRS_4552 NC_009523.1 5709519 5710259 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(5709519..5710259) Roseiflexus sp. RS-1 5211537 YP_001278834.1 CDS RoseRS_4553 NC_009523.1 5710290 5711408 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(5710290..5711408) Roseiflexus sp. RS-1 5211538 YP_001278835.1 CDS RoseRS_4554 NC_009523.1 5711451 5712056 R hypothetical protein complement(5711451..5712056) Roseiflexus sp. RS-1 5211539 YP_001278836.1 CDS RoseRS_4555 NC_009523.1 5713189 5713566 D hypothetical protein 5713189..5713566 Roseiflexus sp. RS-1 5211540 YP_001278837.1 CDS RoseRS_4556 NC_009523.1 5713662 5715674 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 5713662..5715674 Roseiflexus sp. RS-1 5211541 YP_001278838.1 CDS RoseRS_4557 NC_009523.1 5715683 5716654 D PFAM: Mg2+ transporter protein, CorA family protein; Mg2+ transporter protein, CorA family protein 5715683..5716654 Roseiflexus sp. RS-1 5211542 YP_001278839.1 CDS RoseRS_4558 NC_009523.1 5716651 5717550 D Mg2+ and Co2+ transporter-like protein 5716651..5717550 Roseiflexus sp. RS-1 5211543 YP_001278840.1 CDS RoseRS_4559 NC_009523.1 5717586 5717909 D hypothetical protein 5717586..5717909 Roseiflexus sp. RS-1 5211544 YP_001278841.1 CDS RoseRS_4560 NC_009523.1 5717906 5718850 D PFAM: Mg2+ transporter protein, CorA family protein; Mg2+ transporter protein, CorA family protein 5717906..5718850 Roseiflexus sp. RS-1 5211545 YP_001278842.1 CDS RoseRS_4561 NC_009523.1 5718933 5719262 D hypothetical protein 5718933..5719262 Roseiflexus sp. RS-1 5211546 YP_001278843.1 CDS RoseRS_4562 NC_009523.1 5719342 5720679 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5719342..5720679 Roseiflexus sp. RS-1 5211547 YP_001278844.1 CDS RoseRS_4563 NC_009523.1 5720870 5721370 D PFAM: NUDIX hydrolase; NUDIX hydrolase 5720870..5721370 Roseiflexus sp. RS-1 5211548 YP_001278845.1 CDS RoseRS_4564 NC_009523.1 5721577 5722419 D PFAM: MgtC/SapB transporter; MgtC/SapB transporter 5721577..5722419 Roseiflexus sp. RS-1 5211549 YP_001278846.1 CDS RoseRS_4565 NC_009523.1 5722693 5723451 R PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; stage II sporulation E family protein complement(5722693..5723451) Roseiflexus sp. RS-1 5211551 YP_001278847.1 CDS RoseRS_4566 NC_009523.1 5723744 5725105 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(5723744..5725105) Roseiflexus sp. RS-1 5211552 YP_001278848.1 CDS RoseRS_4567 NC_009523.1 5725326 5726225 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(5725326..5726225) Roseiflexus sp. RS-1 5211553 YP_001278849.1 CDS RoseRS_4568 NC_009523.1 5726431 5727489 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(5726431..5727489) Roseiflexus sp. RS-1 5211554 YP_001278850.1 CDS RoseRS_4569 NC_009523.1 5727600 5727839 D hypothetical protein 5727600..5727839 Roseiflexus sp. RS-1 5211555 YP_001278851.1 CDS RoseRS_4570 NC_009523.1 5727964 5729307 D PFAM: aminotransferase class-III; class III aminotransferase 5727964..5729307 Roseiflexus sp. RS-1 5211556 YP_001278852.1 CDS RoseRS_4571 NC_009523.1 5729331 5730155 D PFAM: protein of unknown function DUF820; hypothetical protein 5729331..5730155 Roseiflexus sp. RS-1 5211557 YP_001278853.1 CDS RoseRS_4572 NC_009523.1 5730152 5730769 D hypothetical protein 5730152..5730769 Roseiflexus sp. RS-1 5211558 YP_001278854.1 CDS RoseRS_4573 NC_009523.1 5730860 5731201 D hypothetical protein 5730860..5731201 Roseiflexus sp. RS-1 5211559 YP_001278855.1 CDS RoseRS_4574 NC_009523.1 5731625 5732998 D TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 5731625..5732998 Roseiflexus sp. RS-1 5211560 YP_001278856.1 CDS RoseRS_4575 NC_009523.1 5732979 5733617 D PFAM: Formiminotransferase-cyclodeaminase; formiminotransferase-cyclodeaminase 5732979..5733617 Roseiflexus sp. RS-1 5211561 YP_001278857.1 CDS RoseRS_4576 NC_009523.1 5733691 5734641 D PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5733691..5734641 Roseiflexus sp. RS-1 5211562 YP_001278858.1 CDS RoseRS_4577 NC_009523.1 5734797 5737103 R PFAM: ribonucleotide reductase large subunit; ATP-cone domain protein; ribonucleoside-triphosphate reductase complement(5734797..5737103) Roseiflexus sp. RS-1 5211563 YP_001278859.1 CDS RoseRS_4578 NC_009523.1 5737456 5740014 D PFAM: protein of unknown function DUF323; hypothetical protein 5737456..5740014 Roseiflexus sp. RS-1 5211564 YP_001278860.1 CDS RoseRS_4579 NC_009523.1 5740129 5741325 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 5740129..5741325 Roseiflexus sp. RS-1 5211565 YP_001278861.1 CDS RoseRS_4580 NC_009523.1 5741316 5741762 D hypothetical protein 5741316..5741762 Roseiflexus sp. RS-1 5211566 YP_001278862.1 CDS RoseRS_4581 NC_009523.1 5741802 5742257 D hypothetical protein 5741802..5742257 Roseiflexus sp. RS-1 5211567 YP_001278863.1 CDS RoseRS_4582 NC_009523.1 5742288 5743046 R hypothetical protein complement(5742288..5743046) Roseiflexus sp. RS-1 5211568 YP_001278864.1 CDS RoseRS_4583 NC_009523.1 5743135 5743623 D hypothetical protein 5743135..5743623 Roseiflexus sp. RS-1 5211569 YP_001278865.1 CDS RoseRS_4584 NC_009523.1 5743628 5744434 R TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase complement(5743628..5744434) Roseiflexus sp. RS-1 5211570 YP_001278866.1 CDS RoseRS_4585 NC_009523.1 5744467 5744799 D PFAM: small multidrug resistance protein; small multidrug resistance protein 5744467..5744799 Roseiflexus sp. RS-1 5211571 YP_001278867.1 CDS RoseRS_4586 NC_009523.1 5744820 5745581 R PFAM: Phosphoglycerate mutase; phosphoglycerate mutase complement(5744820..5745581) Roseiflexus sp. RS-1 5211572 YP_001278868.1 CDS RoseRS_4587 NC_009523.1 5745723 5747555 D PFAM: ABC-1 domain protein; hypothetical protein 5745723..5747555 Roseiflexus sp. RS-1 5211573 YP_001278869.1 CDS RoseRS_4588 NC_009523.1 5747623 5748474 D spermidine synthase-like protein 5747623..5748474 Roseiflexus sp. RS-1 5211574 YP_001278870.1 CDS RoseRS_4589 NC_009523.1 5748632 5749594 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; transposase, IS111A/IS1328/IS1533 5748632..5749594 Roseiflexus sp. RS-1 5211575 YP_001278871.1 CDS RoseRS_4590 NC_009523.1 5749698 5750780 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 5749698..5750780 Roseiflexus sp. RS-1 5211576 YP_001278872.1 CDS RoseRS_4591 NC_009523.1 5750925 5751566 D PFAM: Allergen V5/Tpx-1 family protein; allergen V5/Tpx-1 family protein 5750925..5751566 Roseiflexus sp. RS-1 5211577 YP_001278873.1 CDS RoseRS_4592 NC_009523.1 5751976 5753850 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase complement(5751976..5753850) Roseiflexus sp. RS-1 5211578 YP_001278874.1 CDS RoseRS_4593 NC_009523.1 5754438 5756183 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 5754438..5756183 Roseiflexus sp. RS-1 5211579 YP_001278875.1 CDS RoseRS_4594 NC_009523.1 5756202 5757512 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5756202..5757512 Roseiflexus sp. RS-1 5211580 YP_001278876.1 CDS RoseRS_4595 NC_009523.1 5757502 5758674 R PFAM: glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase complement(5757502..5758674) Roseiflexus sp. RS-1 5211581 YP_001278877.1 CDS RoseRS_4596 NC_009523.1 5759332 5761719 D PFAM: protein kinase; SMART: serine/threonine protein kinase; protein kinase 5759332..5761719 Roseiflexus sp. RS-1 5211582 YP_001278878.1 CDS RoseRS_4597 NC_009523.1 5761731 5762765 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(5761731..5762765) Roseiflexus sp. RS-1 5211583 YP_001278879.1 CDS RoseRS_4598 NC_009523.1 5762790 5763749 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(5762790..5763749) Roseiflexus sp. RS-1 5211584 YP_001278880.1 CDS RoseRS_4599 NC_009523.1 5763828 5765693 R PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(5763828..5765693) Roseiflexus sp. RS-1 5211585 YP_001278881.1 CDS RoseRS_4600 NC_009523.1 5765998 5766642 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase complement(5765998..5766642) Roseiflexus sp. RS-1 5211586 YP_001278882.1 CDS RoseRS_4601 NC_009523.1 5766769 5767617 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; dTDP-4-dehydrorhamnose reductase complement(5766769..5767617) Roseiflexus sp. RS-1 5211587 YP_001278883.1 CDS RoseRS_4602 NC_009523.1 5767666 5768379 R PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III complement(5767666..5768379) Roseiflexus sp. RS-1 5211588 YP_001278884.1 CDS RoseRS_4603 NC_009523.1 5768363 5769610 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(5768363..5769610) Roseiflexus sp. RS-1 5211589 YP_001278885.1 CDS RoseRS_4604 NC_009523.1 5769770 5771407 R PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; protein kinase complement(5769770..5771407) Roseiflexus sp. RS-1 5211590 YP_001278886.1 CDS RoseRS_4605 NC_009523.1 5771517 5772473 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5771517..5772473) Roseiflexus sp. RS-1 5211591 YP_001278887.1 CDS RoseRS_4606 NC_009523.1 5772493 5773296 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5772493..5773296) Roseiflexus sp. RS-1 5211592 YP_001278888.1 CDS RoseRS_4607 NC_009523.1 5773293 5774213 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(5773293..5774213) Roseiflexus sp. RS-1 5211593 YP_001278889.1 CDS RoseRS_4608 NC_009523.1 5774371 5774790 D PFAM: response regulator receiver; response regulator receiver protein 5774371..5774790 Roseiflexus sp. RS-1 5211594 YP_001278890.1 CDS RoseRS_4609 NC_009523.1 5774953 5775228 R hypothetical protein complement(5774953..5775228) Roseiflexus sp. RS-1 5211595 YP_001278891.1 CDS RoseRS_4610 NC_009523.1 5775238 5776152 R PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosylation/crystallin J1 complement(5775238..5776152) Roseiflexus sp. RS-1 5211596 YP_001278892.1 CDS RoseRS_4611 NC_009523.1 5776458 5777237 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(5776458..5777237) Roseiflexus sp. RS-1 5211597 YP_001278893.1 CDS RoseRS_4612 NC_009523.1 5777256 5778791 R PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(5777256..5778791) Roseiflexus sp. RS-1 5211598 YP_001278894.1 CDS RoseRS_4613 NC_009523.1 5778833 5780371 R PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(5778833..5780371) Roseiflexus sp. RS-1 5211599 YP_001278895.1 CDS RoseRS_4614 NC_009523.1 5780423 5782447 R TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; transketolase complement(5780423..5782447) Roseiflexus sp. RS-1 5211600 YP_001278896.1 CDS RoseRS_4615 NC_009523.1 5782491 5783144 R TIGRFAM: putative transaldolase; PFAM: Transaldolase; putative transaldolase complement(5782491..5783144) Roseiflexus sp. RS-1 5211601 YP_001278897.1 CDS RoseRS_4616 NC_009523.1 5783363 5784568 D PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor 5783363..5784568 Roseiflexus sp. RS-1 5211602 YP_001278898.1 CDS RoseRS_4617 NC_009523.1 5784639 5785583 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5784639..5785583 Roseiflexus sp. RS-1 5211603 YP_001278899.1 CDS RoseRS_4618 NC_009523.1 5785576 5786364 D PFAM: ABC-2 type transporter; ABC-2 type transporter 5785576..5786364 Roseiflexus sp. RS-1 5211604 YP_001278900.1 CDS RoseRS_4619 NC_009523.1 5786438 5787175 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 5786438..5787175 Roseiflexus sp. RS-1 5211605 YP_001278901.1 CDS RoseRS_4620 NC_009523.1 5787193 5788443 R PFAM: response regulator receiver; response regulator receiver protein complement(5787193..5788443) Roseiflexus sp. RS-1 5211606 YP_001278902.1 CDS RoseRS_4621 NC_009523.1 5788754 5791246 D SMART: Integrin alpha beta-propellor repeat protein; alpha beta-propellor repeat-containing integrin 5788754..5791246 Roseiflexus sp. RS-1 5211607 YP_001278903.1 CDS RoseRS_4622 NC_009523.1 5791239 5792282 R SMART: AAA ATPase; ATPase AAA complement(5791239..5792282) Roseiflexus sp. RS-1 5211608 YP_001278904.1 CDS RoseRS_4623 NC_009523.1 5792773 5793783 D hypothetical protein 5792773..5793783 Roseiflexus sp. RS-1 5211609 YP_001278905.1 CDS RoseRS_4624 NC_009523.1 5793976 5794386 D PFAM: CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 5793976..5794386 Roseiflexus sp. RS-1 5211610 YP_001278906.1 CDS RoseRS_4625 NC_009523.1 5794501 5795649 D PFAM: nitroreductase; nitroreductase 5794501..5795649 Roseiflexus sp. RS-1 5211611 YP_001278907.1 CDS RoseRS_4626 NC_009523.1 5795699 5797477 D PFAM: peptidase M23B; peptidase M23B 5795699..5797477 Roseiflexus sp. RS-1 5211612 YP_001278908.1 CDS RoseRS_4627 NC_009523.1 5797594 5799582 D PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; GAF sensor signal transduction histidine kinase 5797594..5799582 Roseiflexus sp. RS-1 5211613 YP_001278909.1 CDS RoseRS_4628 NC_009523.1 5799650 5800753 D PFAM: creatinase; peptidase M24; peptidase M24 5799650..5800753 Roseiflexus sp. RS-1 5211614 YP_001278910.1 CDS RoseRS_4629 NC_009523.1 5801012 5801566 D TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; putative transcriptional regulator 5801012..5801566 Roseiflexus sp. RS-1 5211615 RoseRS_R0001 tRNA RoseRS_R0001 NC_009523.1 183158 183232 D tRNA-Gly 183158..183232 Roseiflexus sp. RS-1 5207078 RoseRS_R0003 tRNA RoseRS_R0003 NC_009523.1 209010 209086 D tRNA-Val 209010..209086 Roseiflexus sp. RS-1 5207099 RoseRS_R0005 tRNA RoseRS_R0005 NC_009523.1 622834 622908 R tRNA-Thr complement(622834..622908) Roseiflexus sp. RS-1 5207427 RoseRS_R0006 tRNA RoseRS_R0006 NC_009523.1 678592 678667 R tRNA-Gly complement(678592..678667) Roseiflexus sp. RS-1 5207481 RoseRS_R0007 tRNA RoseRS_R0007 NC_009523.1 866969 867042 D tRNA-Gly 866969..867042 Roseiflexus sp. RS-1 5207632 RoseRS_R0008 tRNA RoseRS_R0008 NC_009523.1 958788 958864 R tRNA-Pro complement(958788..958864) Roseiflexus sp. RS-1 5207714 RoseRS_R0009 tRNA RoseRS_R0009 NC_009523.1 967499 967587 D tRNA-Leu 967499..967587 Roseiflexus sp. RS-1 5207721 RoseRS_R0010 tRNA RoseRS_R0010 NC_009523.1 967589 967664 D tRNA-Val 967589..967664 Roseiflexus sp. RS-1 5207722 RoseRS_R0011 tRNA RoseRS_R0011 NC_009523.1 967706 967781 D tRNA-Phe 967706..967781 Roseiflexus sp. RS-1 5207723 RoseRS_R0012 tRNA RoseRS_R0012 NC_009523.1 1026564 1026639 R tRNA-Met complement(1026564..1026639) Roseiflexus sp. RS-1 5207770 RoseRS_R0013 tRNA RoseRS_R0013 NC_009523.1 1048580 1048655 R tRNA-Asp complement(1048580..1048655) Roseiflexus sp. RS-1 5207789 RoseRS_R0014 tRNA RoseRS_R0014 NC_009523.1 1048664 1048740 R tRNA-Glu complement(1048664..1048740) Roseiflexus sp. RS-1 5207790 RoseRS_R0015 tRNA RoseRS_R0015 NC_009523.1 1343196 1343270 R tRNA-Lys complement(1343196..1343270) Roseiflexus sp. RS-1 5208025 RoseRS_R0019 tRNA RoseRS_R0019 NC_009523.1 1419123 1419197 D tRNA-Met 1419123..1419197 Roseiflexus sp. RS-1 5208086 RoseRS_R0020 tRNA RoseRS_R0020 NC_009523.1 1462567 1462643 D tRNA-Glu 1462567..1462643 Roseiflexus sp. RS-1 5208144 RoseRS_R0021 tRNA RoseRS_R0021 NC_009523.1 1731942 1732017 R tRNA-Ala complement(1731942..1732017) Roseiflexus sp. RS-1 5208373 RoseRS_R0022 tRNA RoseRS_R0022 NC_009523.1 1732062 1732138 R tRNA-Ile complement(1732062..1732138) Roseiflexus sp. RS-1 5208374 RoseRS_R0023 tRNA RoseRS_R0023 NC_009523.1 1785593 1785669 R tRNA-Val complement(1785593..1785669) Roseiflexus sp. RS-1 5208422 RoseRS_R0024 tRNA RoseRS_R0024 NC_009523.1 2020547 2020620 R tRNA-Gln complement(2020547..2020620) Roseiflexus sp. RS-1 5208601 RoseRS_R0025 tRNA RoseRS_R0025 NC_009523.1 2020657 2020743 R tRNA-Leu complement(2020657..2020743) Roseiflexus sp. RS-1 5208602 RoseRS_R0026 tRNA RoseRS_R0026 NC_009523.1 2190218 2190303 D tRNA-Leu 2190218..2190303 Roseiflexus sp. RS-1 5208730 RoseRS_R0027 tRNA RoseRS_R0027 NC_009523.1 2190325 2190401 D tRNA-Pro 2190325..2190401 Roseiflexus sp. RS-1 5208731 RoseRS_R0028 tRNA RoseRS_R0028 NC_009523.1 2276449 2276523 R tRNA-Met complement(2276449..2276523) Roseiflexus sp. RS-1 5208801 RoseRS_R0029 tRNA RoseRS_R0029 NC_009523.1 2340230 2340305 R tRNA-Lys complement(2340230..2340305) Roseiflexus sp. RS-1 5208845 RoseRS_R0030 tRNA RoseRS_R0030 NC_009523.1 2407769 2407844 R tRNA-Arg complement(2407769..2407844) Roseiflexus sp. RS-1 5208903 RoseRS_R0031 tRNA RoseRS_R0031 NC_009523.1 2675595 2675669 R tRNA-Asn complement(2675595..2675669) Roseiflexus sp. RS-1 5209137 RoseRS_R0035 tRNA RoseRS_R0035 NC_009523.1 2808303 2808377 D tRNA-Met 2808303..2808377 Roseiflexus sp. RS-1 5209241 RoseRS_R0036 tRNA RoseRS_R0036 NC_009523.1 2904615 2904690 R tRNA-Ala complement(2904615..2904690) Roseiflexus sp. RS-1 5209315 RoseRS_R0037 tRNA RoseRS_R0037 NC_009523.1 2904697 2904772 R tRNA-Ala complement(2904697..2904772) Roseiflexus sp. RS-1 5209316 RoseRS_R0038 tRNA RoseRS_R0038 NC_009523.1 3911765 3911841 D tRNA-Pro 3911765..3911841 Roseiflexus sp. RS-1 5210082 RoseRS_R0039 tRNA RoseRS_R0039 NC_009523.1 3923676 3923761 D tRNA-Leu 3923676..3923761 Roseiflexus sp. RS-1 5210094 RoseRS_R0040 tRNA RoseRS_R0040 NC_009523.1 3993122 3993198 R tRNA-Arg complement(3993122..3993198) Roseiflexus sp. RS-1 5210140 RoseRS_R0041 tRNA RoseRS_R0041 NC_009523.1 4052554 4052644 R tRNA-Ser complement(4052554..4052644) Roseiflexus sp. RS-1 5210185 RoseRS_R0042 tRNA RoseRS_R0042 NC_009523.1 4055767 4055842 D tRNA-Trp 4055767..4055842 Roseiflexus sp. RS-1 5210190 RoseRS_R0043 tRNA RoseRS_R0043 NC_009523.1 4055881 4055972 D tRNA-Ser 4055881..4055972 Roseiflexus sp. RS-1 5210191 RoseRS_R0044 tRNA RoseRS_R0044 NC_009523.1 4055986 4056076 D tRNA-Ser 4055986..4056076 Roseiflexus sp. RS-1 5210192 RoseRS_R0045 tRNA RoseRS_R0045 NC_009523.1 4173039 4173125 D tRNA-Tyr 4173039..4173125 Roseiflexus sp. RS-1 5210298 RoseRS_R0046 tRNA RoseRS_R0046 NC_009523.1 4173201 4173276 D tRNA-Thr 4173201..4173276 Roseiflexus sp. RS-1 5210299 RoseRS_R0047 tRNA RoseRS_R0047 NC_009523.1 4428276 4428351 D tRNA-Thr 4428276..4428351 Roseiflexus sp. RS-1 5210512 RoseRS_R0049 tRNA RoseRS_R0049 NC_009523.1 4655290 4655366 D tRNA-Arg 4655290..4655366 Roseiflexus sp. RS-1 5210697 RoseRS_R0050 tRNA RoseRS_R0050 NC_009523.1 4655425 4655514 D tRNA-Ser 4655425..4655514 Roseiflexus sp. RS-1 5210698 RoseRS_R0051 tRNA RoseRS_R0051 NC_009523.1 4676472 4676547 D tRNA-Arg 4676472..4676547 Roseiflexus sp. RS-1 5210720 RoseRS_R0052 tRNA RoseRS_R0052 NC_009523.1 4871342 4871416 D tRNA-Cys 4871342..4871416 Roseiflexus sp. RS-1 5210872 RoseRS_R0053 tRNA RoseRS_R0053 NC_009523.1 4929693 4929767 D tRNA-His 4929693..4929767 Roseiflexus sp. RS-1 5210922 RoseRS_R0054 tRNA RoseRS_R0054 NC_009523.1 5168295 5168379 D tRNA-Leu 5168295..5168379 Roseiflexus sp. RS-1 5211108 RoseRS_R0055 tRNA RoseRS_R0055 NC_009523.1 5254500 5254575 D tRNA-Arg 5254500..5254575 Roseiflexus sp. RS-1 5211179 RoseRS_R0056 tRNA RoseRS_R0056 NC_009523.1 5507986 5508059 D tRNA-Gln 5507986..5508059 Roseiflexus sp. RS-1 5211377 RoseRS_R0057 tRNA RoseRS_R0057 NC_009523.1 5722495 5722571 D tRNA-Glu 5722495..5722571 Roseiflexus sp. RS-1 5211550 RoseRS_R0016 rRNA RoseRS_R0016 NC_009523.1 1414348 1415838 D 16S ribosomal RNA 1414348..1415838 Roseiflexus sp. RS-1 5208083 RoseRS_R0017 rRNA RoseRS_R0017 NC_009523.1 1415974 1418934 D 23S ribosomal RNA 1415974..1418934 Roseiflexus sp. RS-1 5208084 RoseRS_R0018 rRNA RoseRS_R0018 NC_009523.1 1419001 1419120 D 5S ribosomal RNA 1419001..1419120 Roseiflexus sp. RS-1 5208085 RoseRS_R0032 rRNA RoseRS_R0032 NC_009523.1 2803528 2805018 D 16S ribosomal RNA 2803528..2805018 Roseiflexus sp. RS-1 5209238 RoseRS_R0033 rRNA RoseRS_R0033 NC_009523.1 2805154 2808114 D 23S ribosomal RNA 2805154..2808114 Roseiflexus sp. RS-1 5209239 RoseRS_R0034 rRNA RoseRS_R0034 NC_009523.1 2808181 2808300 D 5S ribosomal RNA 2808181..2808300 Roseiflexus sp. RS-1 5209240