-- dump date 20140620_040801 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001430158.1 156740029 5541967 370..1812 1 NC_009767.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1812 dnaA 5541967 dnaA Roseiflexus castenholzii DSM 13941 chromosomal replication initiation protein YP_001430158.1 370 D 383372 CDS YP_001430159.1 156740030 5537459 1923..3086 1 NC_009767.1 KEGG: rrs:RoseRS_0065 secreted hydrolase-like protein; secreted hydrolase-like protein 3086 5537459 Rcas_0002 Roseiflexus castenholzii DSM 13941 secreted hydrolase-like protein YP_001430159.1 1923 D 383372 CDS YP_001430160.1 156740031 5537460 3125..3502 1 NC_009767.1 PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_0066 thioesterase superfamily protein; thioesterase superfamily protein 3502 5537460 Rcas_0003 Roseiflexus castenholzii DSM 13941 thioesterase superfamily protein YP_001430160.1 3125 D 383372 CDS YP_001430161.1 156740032 5537461 complement(3540..3965) 1 NC_009767.1 KEGG: rrs:RoseRS_0070 hypothetical protein; hypothetical protein 3965 5537461 Rcas_0004 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430161.1 3540 R 383372 CDS YP_001430162.1 156740033 5537462 complement(3966..4196) 1 NC_009767.1 KEGG: rrs:RoseRS_0071 hypothetical protein; hypothetical protein 4196 5537462 Rcas_0005 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430162.1 3966 R 383372 CDS YP_001430163.1 156740034 5537463 complement(4259..4687) 1 NC_009767.1 PFAM: histidine triad (HIT) protein; KEGG: rrs:RoseRS_0075 histidine triad (HIT) protein; histidine triad (HIT) protein 4687 5537463 Rcas_0006 Roseiflexus castenholzii DSM 13941 histidine triad (HIT) protein YP_001430163.1 4259 R 383372 CDS YP_001430164.1 156740035 5537464 complement(4718..6460) 1 NC_009767.1 PFAM: helix-hairpin-helix motif; PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: rrs:RoseRS_0076 PHP C-terminal domain protein; phosphotransferase domain-containing protein 6460 5537464 Rcas_0007 Roseiflexus castenholzii DSM 13941 phosphotransferase domain-containing protein YP_001430164.1 4718 R 383372 CDS YP_001430165.1 156740036 5537465 6922..7395 1 NC_009767.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 7395 greA 5537465 greA Roseiflexus castenholzii DSM 13941 transcription elongation factor GreA YP_001430165.1 6922 D 383372 CDS YP_001430166.1 156740037 5537466 7529..8998 1 NC_009767.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 8998 lysS 5537466 lysS Roseiflexus castenholzii DSM 13941 lysyl-tRNA synthetase YP_001430166.1 7529 D 383372 CDS YP_001430167.1 156740038 5537467 9035..9283 1 NC_009767.1 KEGG: rrs:RoseRS_0079 hypothetical protein; hypothetical protein 9283 5537467 Rcas_0010 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430167.1 9035 D 383372 CDS YP_001430168.1 156740039 5537468 9480..9875 1 NC_009767.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rrs:RoseRS_0080 death-on-curing family protein; death-on-curing family protein 9875 5537468 Rcas_0011 Roseiflexus castenholzii DSM 13941 death-on-curing family protein YP_001430168.1 9480 D 383372 CDS YP_001430169.1 156740040 5537469 9892..10830 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_0081 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 10830 5537469 Rcas_0012 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001430169.1 9892 D 383372 CDS YP_001430170.1 156740041 5537470 11062..12375 1 NC_009767.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_0082 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 12375 5537470 Rcas_0013 Roseiflexus castenholzii DSM 13941 phospholipid/glycerol acyltransferase YP_001430170.1 11062 D 383372 CDS YP_001430171.1 156740042 5537471 complement(13696..14769) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4518 glycosyl transferase, family 2; glycosyl transferase family protein 14769 5537471 Rcas_0014 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430171.1 13696 R 383372 CDS YP_001430172.1 156740043 5537472 14871..16382 1 NC_009767.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_4519 cell envelope-related transcriptional attenuator; cell envelope-like transcriptional attenuator 16382 5537472 Rcas_0015 Roseiflexus castenholzii DSM 13941 cell envelope-like transcriptional attenuator YP_001430172.1 14871 D 383372 CDS YP_001430173.1 156740044 5537473 16565..17104 1 NC_009767.1 PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_4520 thioesterase superfamily protein; thioesterase superfamily protein 17104 5537473 Rcas_0016 Roseiflexus castenholzii DSM 13941 thioesterase superfamily protein YP_001430173.1 16565 D 383372 CDS YP_001430174.1 156740045 5537474 complement(17324..18325) 1 NC_009767.1 PFAM: glycosyl transferase family 4; KEGG: rrs:RoseRS_4524 glycosyl transferase, family 4; glycosyl transferase family protein 18325 5537474 Rcas_0017 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430174.1 17324 R 383372 CDS YP_001430175.1 156740046 5537475 18464..19081 1 NC_009767.1 PFAM: BioY protein; KEGG: rrs:RoseRS_4523 BioY protein; BioY protein 19081 5537475 Rcas_0018 Roseiflexus castenholzii DSM 13941 BioY protein YP_001430175.1 18464 D 383372 CDS YP_001430176.1 156740047 5537476 complement(21418..22704) 1 NC_009767.1 TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_4522 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase 22704 5537476 Rcas_0019 Roseiflexus castenholzii DSM 13941 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase YP_001430176.1 21418 R 383372 CDS YP_001430177.1 156740048 5537477 complement(22709..23590) 1 NC_009767.1 PFAM: amidinotransferase; KEGG: rrs:RoseRS_4521 amidinotransferase; amidinotransferase 23590 5537477 Rcas_0020 Roseiflexus castenholzii DSM 13941 amidinotransferase YP_001430177.1 22709 R 383372 CDS YP_001430178.1 156740049 5537478 25868..27007 1 NC_009767.1 KEGG: rrs:RoseRS_4525 hypothetical protein; hypothetical protein 27007 5537478 Rcas_0021 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430178.1 25868 D 383372 CDS YP_001430179.1 156740050 5537479 27424..28374 1 NC_009767.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_4526 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 28374 5537479 Rcas_0022 Roseiflexus castenholzii DSM 13941 glyoxalase/bleomycin resistance protein/dioxygenase YP_001430179.1 27424 D 383372 CDS YP_001430180.1 156740051 5537480 complement(28504..30525) 1 NC_009767.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: rrs:RoseRS_4527 sodium/hydrogen exchanger; sodium/hydrogen exchanger 30525 5537480 Rcas_0023 Roseiflexus castenholzii DSM 13941 sodium/hydrogen exchanger YP_001430180.1 28504 R 383372 CDS YP_001430181.1 156740052 5537481 30940..31614 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4530 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 31614 5537481 Rcas_0024 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001430181.1 30940 D 383372 CDS YP_001430182.1 156740053 5537482 31620..32162 1 NC_009767.1 KEGG: rrs:RoseRS_4531 transmembrane anti-sigma factor; transmembrane anti-sigma factor 32162 5537482 Rcas_0025 Roseiflexus castenholzii DSM 13941 transmembrane anti-sigma factor YP_001430182.1 31620 D 383372 CDS YP_001430183.1 156740054 5537483 32298..32636 1 NC_009767.1 hypothetical protein 32636 5537483 Rcas_0026 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430183.1 32298 D 383372 CDS YP_001430184.1 156740055 5537484 complement(33607..34134) 1 NC_009767.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rrs:RoseRS_0828 single-strand binding protein; single-strand binding protein 34134 5537484 Rcas_0027 Roseiflexus castenholzii DSM 13941 single-strand binding protein YP_001430184.1 33607 R 383372 CDS YP_001430185.1 156740056 5537485 34407..36539 1 NC_009767.1 PFAM: glycosyl transferase group 1; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0780 glycosyl transferase, group 1; group 1 glycosyl transferase 36539 5537485 Rcas_0028 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430185.1 34407 D 383372 CDS YP_001430186.1 156740057 5537486 36569..38632 1 NC_009767.1 KEGG: rrs:RoseRS_0779 glycosyl transferase, family 39; glycosyl transferase family protein 38632 5537486 Rcas_0029 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430186.1 36569 D 383372 CDS YP_001430187.1 156740058 5537487 38648..39301 1 NC_009767.1 PFAM: deoxynucleoside kinase; KEGG: rrs:RoseRS_0778 deoxynucleoside kinase; deoxynucleoside kinase 39301 5537487 Rcas_0030 Roseiflexus castenholzii DSM 13941 deoxynucleoside kinase YP_001430187.1 38648 D 383372 CDS YP_001430188.1 156740059 5537488 39423..41324 1 NC_009767.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rrs:RoseRS_0776 hypothetical protein; guanylate cyclase 41324 5537488 Rcas_0031 Roseiflexus castenholzii DSM 13941 guanylate cyclase YP_001430188.1 39423 D 383372 CDS YP_001430189.1 156740060 5537490 41601..45938 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0774 TPR repeat-containing protein; hypothetical protein 45938 5537490 Rcas_0032 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430189.1 41601 D 383372 CDS YP_001430190.1 156740061 5537491 45982..46341 1 NC_009767.1 PFAM: Roadblock/LC7 family protein; KEGG: rrs:RoseRS_0773 roadblock/LC7 family protein; roadblock/LC7 family protein 46341 5537491 Rcas_0033 Roseiflexus castenholzii DSM 13941 roadblock/LC7 family protein YP_001430190.1 45982 D 383372 CDS YP_001430191.1 156740062 5537492 46487..46936 1 NC_009767.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 46936 ndk 5537492 ndk Roseiflexus castenholzii DSM 13941 nucleoside diphosphate kinase YP_001430191.1 46487 D 383372 CDS YP_001430192.1 156740063 5537493 complement(46943..48208) 1 NC_009767.1 KEGG: rrs:RoseRS_0771 hypothetical protein; hypothetical protein 48208 5537493 Rcas_0035 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430192.1 46943 R 383372 CDS YP_001430193.1 156740064 5537494 complement(48275..50185) 1 NC_009767.1 PFAM: VanW family protein; KEGG: rrs:RoseRS_0768 VanW family protein; von Willebrand factor A 50185 5537494 Rcas_0036 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001430193.1 48275 R 383372 CDS YP_001430194.1 156740065 5537495 complement(50282..50983) 1 NC_009767.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 50983 radC 5537495 radC Roseiflexus castenholzii DSM 13941 DNA repair protein RadC YP_001430194.1 50282 R 383372 CDS YP_001430195.1 156740066 5537496 complement(51343..53136) 1 NC_009767.1 PFAM: peptidase M23B; KEGG: rrs:RoseRS_4626 peptidase M23B; peptidase M23B 53136 5537496 Rcas_0038 Roseiflexus castenholzii DSM 13941 peptidase M23B YP_001430195.1 51343 R 383372 CDS YP_001430196.1 156740067 5537498 complement(53764..54087) 1 NC_009767.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: rrs:RoseRS_4624 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 54087 5537498 Rcas_0040 Roseiflexus castenholzii DSM 13941 CutA1 divalent ion tolerance protein YP_001430196.1 53764 R 383372 CDS YP_001430197.1 156740068 5537499 54325..55779 1 NC_009767.1 PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_4193 aldehyde dehydrogenase; aldehyde dehydrogenase 55779 5537499 Rcas_0041 Roseiflexus castenholzii DSM 13941 aldehyde dehydrogenase YP_001430197.1 54325 D 383372 CDS YP_001430198.1 156740069 5537500 complement(55781..56665) 1 NC_009767.1 KEGG: rrs:RoseRS_4192 hypothetical protein; hypothetical protein 56665 5537500 Rcas_0042 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430198.1 55781 R 383372 CDS YP_001430199.1 156740070 5537501 56990..57949 1 NC_009767.1 KEGG: rrs:RoseRS_0859 hypothetical protein; hypothetical protein 57949 5537501 Rcas_0043 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430199.1 56990 D 383372 CDS YP_001430200.1 156740071 5537502 57963..58976 1 NC_009767.1 PFAM: integrase family protein; KEGG: rrs:RoseRS_0860 phage integrase family protein; integrase family protein 58976 5537502 Rcas_0044 Roseiflexus castenholzii DSM 13941 integrase family protein YP_001430200.1 57963 D 383372 CDS YP_001430201.1 156740072 5537503 59089..60288 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_0861 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 60288 5537503 Rcas_0045 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001430201.1 59089 D 383372 CDS YP_001430202.1 156740073 5537504 complement(60431..62023) 1 NC_009767.1 TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: rrs:RoseRS_0862 glycyl-tRNA synthetase; glycyl-tRNA synthetase 62023 5537504 Rcas_0046 Roseiflexus castenholzii DSM 13941 glycyl-tRNA synthetase YP_001430202.1 60431 R 383372 CDS YP_001430203.1 156740074 5537505 complement(62261..63205) 1 NC_009767.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: rrs:RoseRS_0863 phage integrase family protein; integrase family protein 63205 5537505 Rcas_0047 Roseiflexus castenholzii DSM 13941 integrase family protein YP_001430203.1 62261 R 383372 CDS YP_001430204.1 156740075 5537506 complement(63354..64361) 1 NC_009767.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_0864 TIM-barrel protein, nifR3 family; nifR3 family TIM-barrel protein 64361 5537506 Rcas_0048 Roseiflexus castenholzii DSM 13941 nifR3 family TIM-barrel protein YP_001430204.1 63354 R 383372 CDS YP_001430205.1 156740076 5537507 complement(64435..64662) 1 NC_009767.1 hypothetical protein 64662 5537507 Rcas_0049 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430205.1 64435 R 383372 CDS YP_001430206.1 156740077 5537508 64741..66081 1 NC_009767.1 KEGG: rrs:RoseRS_3312 hypothetical protein; hypothetical protein 66081 5537508 Rcas_0050 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430206.1 64741 D 383372 CDS YP_001430207.1 156740078 5537509 complement(66082..67074) 1 NC_009767.1 KEGG: rrs:RoseRS_3313 hypothetical protein; hypothetical protein 67074 5537509 Rcas_0051 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430207.1 66082 R 383372 CDS YP_001430208.1 156740079 5537510 67172..67666 1 NC_009767.1 KEGG: rrs:RoseRS_3314 hypothetical protein; hypothetical protein 67666 5537510 Rcas_0052 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430208.1 67172 D 383372 CDS YP_001430209.1 156740080 5537511 complement(67679..68164) 1 NC_009767.1 KEGG: rrs:RoseRS_3315 hypothetical protein; hypothetical protein 68164 5537511 Rcas_0053 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430209.1 67679 R 383372 CDS YP_001430210.1 156740081 5537512 68332..69099 1 NC_009767.1 PFAM: inositol monophosphatase; KEGG: rrs:RoseRS_3316 inositol monophosphatase; inositol monophosphatase 69099 5537512 Rcas_0054 Roseiflexus castenholzii DSM 13941 inositol monophosphatase YP_001430210.1 68332 D 383372 CDS YP_001430211.1 156740082 5537513 69112..70179 1 NC_009767.1 PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_3317 radical SAM domain protein; radical SAM domain-containing protein 70179 5537513 Rcas_0055 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001430211.1 69112 D 383372 CDS YP_001430212.1 156740083 5537514 70217..70438 1 NC_009767.1 KEGG: rrs:RoseRS_3318 hypothetical protein; hypothetical protein 70438 5537514 Rcas_0056 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430212.1 70217 D 383372 CDS YP_001430213.1 156740084 5537515 70479..71711 1 NC_009767.1 TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_3319 threonine dehydratase; threonine dehydratase 71711 5537515 Rcas_0057 Roseiflexus castenholzii DSM 13941 threonine dehydratase YP_001430213.1 70479 D 383372 CDS YP_001430214.1 156740085 5537516 71729..71950 1 NC_009767.1 KEGG: rrs:RoseRS_3320 hypothetical protein; hypothetical protein 71950 5537516 Rcas_0058 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430214.1 71729 D 383372 CDS YP_001430215.1 156740086 5537517 72044..72265 1 NC_009767.1 KEGG: rrs:RoseRS_3321 hypothetical protein; hypothetical protein 72265 5537517 Rcas_0059 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430215.1 72044 D 383372 CDS YP_001430216.1 156740087 5537518 complement(72281..75718) 1 NC_009767.1 PFAM: HEAT domain containing protein; transcriptional regulator domain protein; PBS lyase HEAT domain protein repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; SMART: AAA ATPase; KEGG: rrs:RoseRS_3322 transcriptional activator domain; transcriptional activator domain-containing protein 75718 5537518 Rcas_0060 Roseiflexus castenholzii DSM 13941 transcriptional activator domain-containing protein YP_001430216.1 72281 R 383372 CDS YP_001430217.1 156740088 5537520 76292..76846 1 NC_009767.1 PFAM: Colicin V production protein; KEGG: rrs:RoseRS_4015 hypothetical protein; colicin V production protein 76846 5537520 Rcas_0061 Roseiflexus castenholzii DSM 13941 colicin V production protein YP_001430217.1 76292 D 383372 CDS YP_001430218.1 156740089 5537521 76893..79373 1 NC_009767.1 KEGG: rrs:RoseRS_4014 MutS2 family protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; MutS2 family protein 79373 5537521 Rcas_0062 Roseiflexus castenholzii DSM 13941 MutS2 family protein YP_001430218.1 76893 D 383372 CDS YP_001430219.1 156740090 5537522 79381..79989 1 NC_009767.1 PFAM: Peptidoglycan-binding LysM; KEGG: rrs:RoseRS_4013 peptidoglycan-binding LysM; peptidoglycan-binding protein LysM 79989 5537522 Rcas_0063 Roseiflexus castenholzii DSM 13941 peptidoglycan-binding protein LysM YP_001430219.1 79381 D 383372 CDS YP_001430220.1 156740091 5537523 79986..80501 1 NC_009767.1 KEGG: rrs:RoseRS_4012 hypothetical protein; hypothetical protein 80501 5537523 Rcas_0064 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430220.1 79986 D 383372 CDS YP_001430221.1 156740092 5537524 80524..81621 1 NC_009767.1 PFAM: Peptidoglycan-binding LysM; polysaccharide deacetylase; KEGG: rrs:RoseRS_4011 polysaccharide deacetylase; polysaccharide deacetylase 81621 5537524 Rcas_0065 Roseiflexus castenholzii DSM 13941 polysaccharide deacetylase YP_001430221.1 80524 D 383372 CDS YP_001430222.1 156740093 5537525 complement(81867..83078) 1 NC_009767.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rrs:RoseRS_4010 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter subunit DctP 83078 5537525 Rcas_0066 Roseiflexus castenholzii DSM 13941 TRAP dicarboxylate transporter subunit DctP YP_001430222.1 81867 R 383372 CDS YP_001430223.1 156740094 5537526 complement(83306..83920) 1 NC_009767.1 KEGG: rrs:RoseRS_4009 hypothetical protein; hypothetical protein 83920 5537526 Rcas_0067 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430223.1 83306 R 383372 CDS YP_001430224.1 156740095 5537527 complement(83942..85336) 1 NC_009767.1 KEGG: rrs:RoseRS_4009 hypothetical protein; hypothetical protein 85336 5537527 Rcas_0068 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430224.1 83942 R 383372 CDS YP_001430225.1 156740096 5537528 complement(85876..88785) 1 NC_009767.1 KEGG: rrs:RoseRS_4007 hypothetical protein; hypothetical protein 88785 5537528 Rcas_0069 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430225.1 85876 R 383372 CDS YP_001430226.1 156740097 5537529 complement(88782..89201) 1 NC_009767.1 KEGG: rrs:RoseRS_4006 hypothetical protein; hypothetical protein 89201 5537529 Rcas_0070 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430226.1 88782 R 383372 CDS YP_001430227.1 156740098 5537530 complement(89188..89430) 1 NC_009767.1 KEGG: rrs:RoseRS_0348 hypothetical protein; hypothetical protein 89430 5537530 Rcas_0071 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430227.1 89188 R 383372 CDS YP_001430228.1 156740099 5537532 complement(90026..91207) 1 NC_009767.1 KEGG: ilo:IL1617 hypothetical protein; hypothetical protein 91207 5537532 Rcas_0073 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430228.1 90026 R 383372 CDS YP_001430229.1 156740100 5537533 complement(91462..92751) 1 NC_009767.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 92751 eno 5537533 eno Roseiflexus castenholzii DSM 13941 phosphopyruvate hydratase YP_001430229.1 91462 R 383372 CDS YP_001430230.1 156740101 5537534 complement(92956..94029) 1 NC_009767.1 PFAM: DRTGG domain protein; KEGG: rrs:RoseRS_4533 DRTGG domain protein; DRTGG domain-containing protein 94029 5537534 Rcas_0075 Roseiflexus castenholzii DSM 13941 DRTGG domain-containing protein YP_001430230.1 92956 R 383372 CDS YP_001430231.1 156740102 5537535 complement(94083..96179) 1 NC_009767.1 TIGRFAM: Acetyl coenzyme A synthetase (ADP forming) alpha domain; PFAM: CoA-binding domain protein; KEGG: rrs:RoseRS_4534 CoA-binding domain protein; acetyl coenzyme A synthetase subunit alpha 96179 5537535 Rcas_0076 Roseiflexus castenholzii DSM 13941 acetyl coenzyme A synthetase subunit alpha YP_001430231.1 94083 R 383372 CDS YP_001430232.1 156740103 5537536 complement(96878..99592) 1 NC_009767.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 99592 leuS 5537536 leuS Roseiflexus castenholzii DSM 13941 leucyl-tRNA synthetase YP_001430232.1 96878 R 383372 CDS YP_001430233.1 156740104 5537537 complement(99635..100456) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4536 methyltransferase type 11; type 11 methyltransferase 100456 5537537 Rcas_0078 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001430233.1 99635 R 383372 CDS YP_001430234.1 156740105 5537538 complement(100541..101056) 1 NC_009767.1 hypothetical protein 101056 5537538 Rcas_0079 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430234.1 100541 R 383372 CDS YP_001430235.1 156740106 5537539 complement(101058..102074) 1 NC_009767.1 KEGG: jan:Jann_4252 hypothetical protein; hypothetical protein 102074 5537539 Rcas_0080 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430235.1 101058 R 383372 CDS YP_001430236.1 156740107 5537540 complement(102424..102759) 1 NC_009767.1 KEGG: syn:sll1400 hypothetical protein; hypothetical protein 102759 5537540 Rcas_0081 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430236.1 102424 R 383372 CDS YP_001430237.1 156740108 5537541 complement(102756..102986) 1 NC_009767.1 PFAM: protein of unknown function DUF433; KEGG: ava:Ava_1741 protein of unknown function DUF433; hypothetical protein 102986 5537541 Rcas_0082 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430237.1 102756 R 383372 CDS YP_001430238.1 156740109 5537542 complement(103142..104125) 1 NC_009767.1 KEGG: rrs:RoseRS_4537 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 104125 5537542 Rcas_0083 Roseiflexus castenholzii DSM 13941 ribose-phosphate pyrophosphokinase YP_001430238.1 103142 R 383372 CDS YP_001430239.1 156740110 5537543 104416..105402 1 NC_009767.1 PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_4538 aldo/keto reductase; aldo/keto reductase 105402 5537543 Rcas_0084 Roseiflexus castenholzii DSM 13941 aldo/keto reductase YP_001430239.1 104416 D 383372 CDS YP_001430240.1 156740111 5537544 105460..106272 1 NC_009767.1 KEGG: rrs:RoseRS_4539 hypothetical protein; hypothetical protein 106272 5537544 Rcas_0085 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430240.1 105460 D 383372 CDS YP_001430241.1 156740112 5537545 complement(106490..108595) 1 NC_009767.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: rrs:RoseRS_4540 translation elongation factor G; translation elongation factor G 108595 5537545 Rcas_0086 Roseiflexus castenholzii DSM 13941 translation elongation factor G YP_001430241.1 106490 R 383372 CDS YP_001430242.1 156740113 5537546 complement(109067..110431) 1 NC_009767.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_4541 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 110431 5537546 Rcas_0087 Roseiflexus castenholzii DSM 13941 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_001430242.1 109067 R 383372 CDS YP_001430243.1 156740114 5537547 110552..110863 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_0900 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 110863 5537547 Rcas_0088 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001430243.1 110552 D 383372 CDS YP_001430244.1 156740115 5537548 110844..111191 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_0899 protein of unknown function DUF86; hypothetical protein 111191 5537548 Rcas_0089 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430244.1 110844 D 383372 CDS YP_001430245.1 156740116 5537549 111188..113281 1 NC_009767.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_4542 molybdopterin oxidoreductase; molybdopterin oxidoreductase 113281 5537549 Rcas_0090 Roseiflexus castenholzii DSM 13941 molybdopterin oxidoreductase YP_001430245.1 111188 D 383372 CDS YP_001430246.1 156740117 5537550 113278..113799 1 NC_009767.1 PFAM: shikimate kinase; KEGG: rrs:RoseRS_4543 shikimate kinase; shikimate kinase 113799 5537550 Rcas_0091 Roseiflexus castenholzii DSM 13941 shikimate kinase YP_001430246.1 113278 D 383372 CDS YP_001430247.1 156740118 5537551 114050..115009 1 NC_009767.1 KEGG: rrs:RoseRS_4544 hypothetical protein; hypothetical protein 115009 5537551 Rcas_0092 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430247.1 114050 D 383372 CDS YP_001430248.1 156740119 5537552 115318..116433 1 NC_009767.1 PFAM: 3-dehydroquinate synthase; KEGG: rrs:RoseRS_4545 3-dehydroquinate synthase; 3-dehydroquinate synthase 116433 5537552 Rcas_0093 Roseiflexus castenholzii DSM 13941 3-dehydroquinate synthase YP_001430248.1 115318 D 383372 CDS YP_001430249.1 156740120 5537553 116430..116843 1 NC_009767.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: maq:Maqu_2654 nucleotidyltransferase substrate binding protein, HI0074 family; nucleotidyltransferase substrate-binding protein 116843 5537553 Rcas_0094 Roseiflexus castenholzii DSM 13941 nucleotidyltransferase substrate-binding protein YP_001430249.1 116430 D 383372 CDS YP_001430250.1 156740121 5537554 116840..117178 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_1133 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 117178 5537554 Rcas_0095 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001430250.1 116840 D 383372 CDS YP_001430251.1 156740122 5537556 complement(117561..117968) 1 NC_009767.1 KEGG: rrs:RoseRS_4546 Cna B domain protein; Cna B domain-containing protein 117968 5537556 Rcas_0097 Roseiflexus castenholzii DSM 13941 Cna B domain-containing protein YP_001430251.1 117561 R 383372 CDS YP_001430252.1 156740123 5537557 complement(118188..118604) 1 NC_009767.1 KEGG: rrs:RoseRS_4546 Cna B domain protein; Cna B domain-containing protein 118604 5537557 Rcas_0098 Roseiflexus castenholzii DSM 13941 Cna B domain-containing protein YP_001430252.1 118188 R 383372 CDS YP_001430253.1 156740124 5537558 118773..120122 1 NC_009767.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_4547 protein phosphatase 2C domain protein; Ser/Thr phosphatase 120122 5537558 Rcas_0099 Roseiflexus castenholzii DSM 13941 Ser/Thr phosphatase YP_001430253.1 118773 D 383372 CDS YP_001430254.1 156740125 5537559 120193..122010 1 NC_009767.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: rrs:RoseRS_4548 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 122010 5537559 Rcas_0100 Roseiflexus castenholzii DSM 13941 DNA mismatch repair protein MutL YP_001430254.1 120193 D 383372 CDS YP_001430255.1 156740126 5537560 complement(122003..122716) 1 NC_009767.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: rrs:RoseRS_4549 iron dependent repressor; DtxR family iron dependent repressor 122716 5537560 Rcas_0101 Roseiflexus castenholzii DSM 13941 DtxR family iron dependent repressor YP_001430255.1 122003 R 383372 CDS YP_001430256.1 156740127 5537561 complement(122743..123090) 1 NC_009767.1 PFAM: protein of unknown function DUF952; KEGG: rrs:RoseRS_4550 protein of unknown function DUF952; hypothetical protein 123090 5537561 Rcas_0102 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430256.1 122743 R 383372 CDS YP_001430257.1 156740128 5537562 complement(123087..124613) 1 NC_009767.1 PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_4551 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 124613 5537562 Rcas_0103 Roseiflexus castenholzii DSM 13941 carbohydrate kinase FGGY YP_001430257.1 123087 R 383372 CDS YP_001430258.1 156740129 5537563 complement(124743..125483) 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_4552 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 125483 5537563 Rcas_0104 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001430258.1 124743 R 383372 CDS YP_001430259.1 156740130 5537564 complement(125516..126634) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4553 alpha/beta hydrolase fold; alpha/beta hydrolase 126634 5537564 Rcas_0105 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001430259.1 125516 R 383372 CDS YP_001430260.1 156740131 5537565 complement(126679..127281) 1 NC_009767.1 KEGG: rrs:RoseRS_4554 hypothetical protein; hypothetical protein 127281 5537565 Rcas_0106 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430260.1 126679 R 383372 CDS YP_001430261.1 156740132 5537566 128145..128390 1 NC_009767.1 hypothetical protein 128390 5537566 Rcas_0107 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430261.1 128145 D 383372 CDS YP_001430262.1 156740133 5537567 128678..129049 1 NC_009767.1 KEGG: rrs:RoseRS_4555 hypothetical protein; hypothetical protein 129049 5537567 Rcas_0108 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430262.1 128678 D 383372 CDS YP_001430263.1 156740134 5537568 129247..131262 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4556 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 131262 5537568 Rcas_0109 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430263.1 129247 D 383372 CDS YP_001430264.1 156740135 5537569 131280..132617 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4562 ABC transporter related; ABC transporter-like protein 132617 5537569 Rcas_0110 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430264.1 131280 D 383372 CDS YP_001430265.1 156740136 5537570 132882..133745 1 NC_009767.1 PFAM: MgtC/SapB transporter; KEGG: rrs:RoseRS_4564 MgtC/SapB transporter; MgtC/SapB transporter 133745 5537570 Rcas_0111 Roseiflexus castenholzii DSM 13941 MgtC/SapB transporter YP_001430265.1 132882 D 383372 CDS YP_001430266.1 156740137 5537572 complement(134044..134799) 1 NC_009767.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_4565 stage II sporulation E family protein; Ser/Thr phosphatase 134799 5537572 Rcas_0112 Roseiflexus castenholzii DSM 13941 Ser/Thr phosphatase YP_001430266.1 134044 R 383372 CDS YP_001430267.1 156740138 5537573 complement(135103..136470) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_4566 extracellular solute-binding protein, family 1; extracellular solute-binding protein 136470 5537573 Rcas_0113 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001430267.1 135103 R 383372 CDS YP_001430268.1 156740139 5537574 complement(136891..137790) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4567 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 137790 5537574 Rcas_0114 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430268.1 136891 R 383372 CDS YP_001430269.1 156740140 5537575 complement(138018..138929) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4568 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 138929 5537575 Rcas_0115 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430269.1 138018 R 383372 CDS YP_001430270.1 156740141 5537576 139332..139541 1 NC_009767.1 KEGG: rrs:RoseRS_4569 hypothetical protein; hypothetical protein 139541 5537576 Rcas_0116 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430270.1 139332 D 383372 CDS YP_001430271.1 156740142 5537577 139673..141034 1 NC_009767.1 PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_4570 aminotransferase class-III; class III aminotransferase 141034 5537577 Rcas_0117 Roseiflexus castenholzii DSM 13941 class III aminotransferase YP_001430271.1 139673 D 383372 CDS YP_001430272.1 156740143 5537578 141027..141791 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4571 protein of unknown function DUF820; hypothetical protein 141791 5537578 Rcas_0118 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430272.1 141027 D 383372 CDS YP_001430273.1 156740144 5537579 141788..142405 1 NC_009767.1 KEGG: rrs:RoseRS_4572 hypothetical protein; hypothetical protein 142405 5537579 Rcas_0119 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430273.1 141788 D 383372 CDS YP_001430274.1 156740145 5537580 142579..142926 1 NC_009767.1 KEGG: rrs:RoseRS_4573 hypothetical protein; hypothetical protein 142926 5537580 Rcas_0120 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430274.1 142579 D 383372 CDS YP_001430275.1 156740146 5537581 143241..144605 1 NC_009767.1 KEGG: rrs:RoseRS_4574 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 144605 5537581 Rcas_0121 Roseiflexus castenholzii DSM 13941 histidyl-tRNA synthetase YP_001430275.1 143241 D 383372 CDS YP_001430276.1 156740147 5537582 144595..145233 1 NC_009767.1 PFAM: Formiminotransferase-cyclodeaminase; KEGG: rrs:RoseRS_4575 formiminotransferase-cyclodeaminase; formiminotransferase-cyclodeaminase 145233 5537582 Rcas_0122 Roseiflexus castenholzii DSM 13941 formiminotransferase-cyclodeaminase YP_001430276.1 144595 D 383372 CDS YP_001430277.1 156740148 5537583 145306..146256 1 NC_009767.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_4576 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 146256 5537583 Rcas_0123 Roseiflexus castenholzii DSM 13941 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001430277.1 145306 D 383372 CDS YP_001430278.1 156740149 5537584 complement(146793..149102) 1 NC_009767.1 PFAM: ATP-cone domain protein; KEGG: rrs:RoseRS_4577 ribonucleoside-triphosphate reductase; ribonucleoside-triphosphate reductase 149102 5537584 Rcas_0124 Roseiflexus castenholzii DSM 13941 ribonucleoside-triphosphate reductase YP_001430278.1 146793 R 383372 CDS YP_001430279.1 156740150 5537585 149995..152340 1 NC_009767.1 PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_4578 protein of unknown function DUF323; hypothetical protein 152340 5537585 Rcas_0125 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430279.1 149995 D 383372 CDS YP_001430280.1 156740151 5537586 153079..154194 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4579 glycosyl transferase, group 1; group 1 glycosyl transferase 154194 5537586 Rcas_0126 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430280.1 153079 D 383372 CDS YP_001430281.1 156740152 5537587 complement(154198..154959) 1 NC_009767.1 PFAM: protein of unknown function DUF1037; KEGG: rrs:RoseRS_4342 protein of unknown function DUF1037; hypothetical protein 154959 5537587 Rcas_0127 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430281.1 154198 R 383372 CDS YP_001430282.1 156740153 5537588 complement(154992..156293) 1 NC_009767.1 KEGG: rrs:RoseRS_0604 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor protein 156293 5537588 Rcas_0128 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001430282.1 154992 R 383372 CDS YP_001430283.1 156740154 5537589 complement(156492..158132) 1 NC_009767.1 PFAM: amino acid permease-associated region; KEGG: rrs:RoseRS_4340 hypothetical protein; amino acid permease 158132 5537589 Rcas_0129 Roseiflexus castenholzii DSM 13941 amino acid permease YP_001430283.1 156492 R 383372 CDS YP_001430284.1 156740155 5537590 complement(158151..158801) 1 NC_009767.1 PFAM: cyclase family protein; KEGG: rrs:RoseRS_4339 cyclase family protein; cyclase family protein 158801 5537590 Rcas_0130 Roseiflexus castenholzii DSM 13941 cyclase family protein YP_001430284.1 158151 R 383372 CDS YP_001430285.1 156740156 5537591 complement(158825..159808) 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_4338 metallophosphoesterase; metallophosphoesterase 159808 5537591 Rcas_0131 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001430285.1 158825 R 383372 CDS YP_001430286.1 156740157 5537592 complement(159811..160545) 1 NC_009767.1 KEGG: rrs:RoseRS_4337 hypothetical protein; hypothetical protein 160545 5537592 Rcas_0132 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430286.1 159811 R 383372 CDS YP_001430287.1 156740158 5537594 complement(162033..162653) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4336 protein of unknown function DUF820; hypothetical protein 162653 5537594 Rcas_0134 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430287.1 162033 R 383372 CDS YP_001430288.1 156740159 5537595 complement(162982..165153) 1 NC_009767.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0463 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 165153 5537595 Rcas_0135 Roseiflexus castenholzii DSM 13941 heavy metal translocating P-type ATPase YP_001430288.1 162982 R 383372 CDS YP_001430289.1 156740160 5537596 complement(165154..165939) 1 NC_009767.1 PFAM: transcriptional regulator TrmB; KEGG: rrs:RoseRS_0464 transcriptional regulator, TrmB; transcriptional regulator TrmB 165939 5537596 Rcas_0136 Roseiflexus castenholzii DSM 13941 transcriptional regulator TrmB YP_001430289.1 165154 R 383372 CDS YP_001430290.1 156740161 5537597 166012..166902 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_0466 glycosyl transferase, family 2; glycosyl transferase family protein 166902 5537597 Rcas_0137 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430290.1 166012 D 383372 CDS YP_001430291.1 156740162 5537598 167013..167894 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_0466 glycosyl transferase, family 2; glycosyl transferase family protein 167894 5537598 Rcas_0138 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430291.1 167013 D 383372 CDS YP_001430292.1 156740163 5537599 167869..168828 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rci:LRC548 glycosyltransferase (family 2); glycosyl transferase family protein 168828 5537599 Rcas_0139 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430292.1 167869 D 383372 CDS YP_001430293.1 156740164 5537600 168816..169763 1 NC_009767.1 KEGG: fra:Francci3_1327 conserved hypothetical protein; hypothetical protein 169763 5537600 Rcas_0140 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430293.1 168816 D 383372 CDS YP_001430294.1 156740165 5537601 169771..170454 1 NC_009767.1 PFAM: Methyltransferase type 11; KEGG: mgm:Mmc1_0584 methyltransferase type 11; type 11 methyltransferase 170454 5537601 Rcas_0141 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001430294.1 169771 D 383372 CDS YP_001430295.1 156740166 5537602 170468..171397 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gur:Gura_3058 methyltransferase type 12; type 12 methyltransferase 171397 5537602 Rcas_0142 Roseiflexus castenholzii DSM 13941 type 12 methyltransferase YP_001430295.1 170468 D 383372 CDS YP_001430296.1 156740167 5537603 171624..173141 1 NC_009767.1 KEGG: rrs:RoseRS_0471 hypothetical protein; hypothetical protein 173141 5537603 Rcas_0143 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430296.1 171624 D 383372 CDS YP_001430297.1 156740168 5537604 complement(173212..174078) 1 NC_009767.1 KEGG: sil:SPO2208 hypothetical protein; hypothetical protein 174078 5537604 Rcas_0144 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430297.1 173212 R 383372 CDS YP_001430298.1 156740169 5537605 complement(174097..175461) 1 NC_009767.1 PFAM: regulatory protein LuxR; Kelch repeat-containing protein; Bacterio-opsin activator HTH domain protein; sigma-70 region 4 domain protein; Kelch repeat protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0474 response regulator receiver protein; LuxR family transcriptional regulator 175461 5537605 Rcas_0145 Roseiflexus castenholzii DSM 13941 LuxR family transcriptional regulator YP_001430298.1 174097 R 383372 CDS YP_001430299.1 156740170 5537606 join(176009..176347,176347..176964) 1 NC_009767.1 KEGG: noc:Noc_0070 transposase; transposase 176964 5537606 Rcas_0146 Roseiflexus castenholzii DSM 13941 transposase YP_001430299.1 176009 D 383372 CDS YP_001430300.1 156740171 5537607 complement(178073..179944) 1 NC_009767.1 KEGG: rrs:RoseRS_0475 hypothetical protein; hypothetical protein 179944 5537607 Rcas_0147 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430300.1 178073 R 383372 CDS YP_001430301.1 156740172 5537608 complement(180272..181018) 1 NC_009767.1 KEGG: rrs:RoseRS_0476 hypothetical protein; hypothetical protein 181018 5537608 Rcas_0148 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430301.1 180272 R 383372 CDS YP_001430302.1 156740173 5537609 181191..181418 1 NC_009767.1 KEGG: rrs:RoseRS_0477 hypothetical protein; hypothetical protein 181418 5537609 Rcas_0149 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430302.1 181191 D 383372 CDS YP_001430303.1 156740174 5537610 181497..182681 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_0478 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 182681 5537610 Rcas_0150 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001430303.1 181497 D 383372 CDS YP_001430304.1 156740175 5537611 182684..183430 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0479 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 183430 5537611 Rcas_0151 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001430304.1 182684 D 383372 CDS YP_001430305.1 156740176 5537612 183619..184023 1 NC_009767.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_0480 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 184023 5537612 Rcas_0152 Roseiflexus castenholzii DSM 13941 glyoxalase/bleomycin resistance protein/dioxygenase YP_001430305.1 183619 D 383372 CDS YP_001430306.1 156740177 5537613 184080..185060 1 NC_009767.1 PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_0481 conserved hypothetical protein 374; hypothetical protein 185060 5537613 Rcas_0153 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430306.1 184080 D 383372 CDS YP_001430307.1 156740178 5537614 185176..186381 1 NC_009767.1 KEGG: rrs:RoseRS_0482 hypothetical protein; hypothetical protein 186381 5537614 Rcas_0154 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430307.1 185176 D 383372 CDS YP_001430308.1 156740179 5537615 complement(186391..189435) 1 NC_009767.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: rrs:RoseRS_0484 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 189435 5537615 Rcas_0155 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001430308.1 186391 R 383372 CDS YP_001430309.1 156740180 5537616 189580..190644 1 NC_009767.1 KEGG: rrs:RoseRS_0485 translation initiation factor, aIF-2BI family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; eIF-2B alpha/beta/delta-like protein 190644 5537616 Rcas_0156 Roseiflexus castenholzii DSM 13941 eIF-2B alpha/beta/delta-like protein YP_001430309.1 189580 D 383372 CDS YP_001430310.1 156740181 5537617 190648..191688 1 NC_009767.1 KEGG: rrs:RoseRS_0486 hypothetical protein; hypothetical protein 191688 5537617 Rcas_0157 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430310.1 190648 D 383372 CDS YP_001430311.1 156740182 5537618 191700..192683 1 NC_009767.1 PFAM: PfkB domain protein; KEGG: rrs:RoseRS_0487 PfkB domain protein; ribokinase-like domain-containing protein 192683 5537618 Rcas_0158 Roseiflexus castenholzii DSM 13941 ribokinase-like domain-containing protein YP_001430311.1 191700 D 383372 CDS YP_001430312.1 156740183 5537619 192826..194088 1 NC_009767.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 194088 5537619 Rcas_0159 Roseiflexus castenholzii DSM 13941 S-adenosyl-L-homocysteine hydrolase YP_001430312.1 192826 D 383372 CDS YP_001430313.1 156740184 5537620 194100..195317 1 NC_009767.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 195317 5537620 Rcas_0160 Roseiflexus castenholzii DSM 13941 S-adenosylmethionine synthetase YP_001430313.1 194100 D 383372 CDS YP_001430314.1 156740185 5537621 195890..196753 1 NC_009767.1 KEGG: rrs:RoseRS_0490 hypothetical protein; hypothetical protein 196753 5537621 Rcas_0161 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430314.1 195890 D 383372 CDS YP_001430315.1 156740186 5537624 198519..199694 1 NC_009767.1 PFAM: glucose sorbosone dehydrogenase; KEGG: rrs:RoseRS_4595 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 199694 5537624 Rcas_0163 Roseiflexus castenholzii DSM 13941 glucose sorbosone dehydrogenase YP_001430315.1 198519 D 383372 CDS YP_001430316.1 156740187 5537625 complement(199681..200991) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4594 ABC transporter related; ABC transporter-like protein 200991 5537625 Rcas_0164 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430316.1 199681 R 383372 CDS YP_001430317.1 156740188 5537626 complement(201010..202734) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4593 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 202734 5537626 Rcas_0165 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430317.1 201010 R 383372 CDS YP_001430318.1 156740189 5537627 203138..204808 1 NC_009767.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rrs:RoseRS_4592 pseudouridine synthase; pseudouridine synthase 204808 5537627 Rcas_0166 Roseiflexus castenholzii DSM 13941 pseudouridine synthase YP_001430318.1 203138 D 383372 CDS YP_001430319.1 156740190 5537628 complement(204959..205588) 1 NC_009767.1 PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_4591 allergen V5/TPX-1 family protein; SCP-like extracellular 205588 5537628 Rcas_0167 Roseiflexus castenholzii DSM 13941 SCP-like extracellular YP_001430319.1 204959 R 383372 CDS YP_001430320.1 156740191 5537629 complement(205885..206967) 1 NC_009767.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rrs:RoseRS_4590 DNA protecting protein DprA; DNA protecting protein DprA 206967 5537629 Rcas_0168 Roseiflexus castenholzii DSM 13941 DNA protecting protein DprA YP_001430320.1 205885 R 383372 CDS YP_001430321.1 156740192 5537630 complement(207046..207900) 1 NC_009767.1 KEGG: rrs:RoseRS_4588 spermidine synthase-like protein; spermidine synthase-like protein 207900 5537630 Rcas_0169 Roseiflexus castenholzii DSM 13941 spermidine synthase-like protein YP_001430321.1 207046 R 383372 CDS YP_001430322.1 156740193 5537631 complement(207908..209674) 1 NC_009767.1 PFAM: ABC-1 domain protein; KEGG: rrs:RoseRS_4587 ABC-1 domain protein; hypothetical protein 209674 5537631 Rcas_0170 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430322.1 207908 R 383372 CDS YP_001430323.1 156740194 5537632 209736..210353 1 NC_009767.1 PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_4586 phosphoglycerate mutase; phosphoglycerate mutase 210353 5537632 Rcas_0171 Roseiflexus castenholzii DSM 13941 phosphoglycerate mutase YP_001430323.1 209736 D 383372 CDS YP_001430324.1 156740195 5537633 complement(210451..210786) 1 NC_009767.1 PFAM: small multidrug resistance protein; KEGG: rrs:RoseRS_4585 small multidrug resistance protein; small multidrug resistance protein 210786 5537633 Rcas_0172 Roseiflexus castenholzii DSM 13941 small multidrug resistance protein YP_001430324.1 210451 R 383372 CDS YP_001430325.1 156740196 5537634 210820..211626 1 NC_009767.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: rrs:RoseRS_4584 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase 211626 5537634 Rcas_0173 Roseiflexus castenholzii DSM 13941 cobalamin 5'-phosphate synthase YP_001430325.1 210820 D 383372 CDS YP_001430326.1 156740197 5537635 complement(211949..212434) 1 NC_009767.1 KEGG: rrs:RoseRS_4583 hypothetical protein; hypothetical protein 212434 5537635 Rcas_0174 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430326.1 211949 R 383372 CDS YP_001430327.1 156740198 5537636 212519..213286 1 NC_009767.1 KEGG: rrs:RoseRS_4582 hypothetical protein; hypothetical protein 213286 5537636 Rcas_0175 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430327.1 212519 D 383372 CDS YP_001430328.1 156740199 5537637 complement(213383..213829) 1 NC_009767.1 KEGG: rrs:RoseRS_4581 hypothetical protein; hypothetical protein 213829 5537637 Rcas_0176 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430328.1 213383 R 383372 CDS YP_001430329.1 156740200 5537638 complement(213927..214373) 1 NC_009767.1 KEGG: rrs:RoseRS_4580 hypothetical protein; hypothetical protein 214373 5537638 Rcas_0177 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430329.1 213927 R 383372 CDS YP_001430330.1 156740201 5537639 214755..215741 1 NC_009767.1 PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_0089 conserved hypothetical protein 374; hypothetical protein 215741 5537639 Rcas_0178 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430330.1 214755 D 383372 CDS YP_001430331.1 156740202 5537640 215738..217084 1 NC_009767.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0088 amine oxidase; hypothetical protein 217084 5537640 Rcas_0179 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430331.1 215738 D 383372 CDS YP_001430332.1 156740203 5537641 217090..217428 1 NC_009767.1 KEGG: rrs:RoseRS_0087 hypothetical protein; hypothetical protein 217428 5537641 Rcas_0180 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430332.1 217090 D 383372 CDS YP_001430333.1 156740204 5537642 217680..218657 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_0359 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 218657 5537642 Rcas_0181 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001430333.1 217680 D 383372 CDS YP_001430334.1 156740205 5537643 218663..219784 1 NC_009767.1 PFAM: glycoside hydrolase family 5; KEGG: aba:Acid345_1689 glycoside hydrolase, family 5; glycoside hydrolase family protein 219784 5537643 Rcas_0182 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001430334.1 218663 D 383372 CDS YP_001430335.1 156740206 5537645 complement(220980..221768) 1 NC_009767.1 PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_0361 hypothetical protein; RNA-binding S1 domain-containing protein 221768 5537645 Rcas_0184 Roseiflexus castenholzii DSM 13941 RNA-binding S1 domain-containing protein YP_001430335.1 220980 R 383372 CDS YP_001430336.1 156740207 5537646 complement(221993..222952) 1 NC_009767.1 KEGG: rrs:RoseRS_0362 hypothetical protein; hypothetical protein 222952 5537646 Rcas_0185 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430336.1 221993 R 383372 CDS YP_001430337.1 156740208 5537647 complement(222949..223425) 1 NC_009767.1 KEGG: rrs:RoseRS_0363 hypothetical protein; hypothetical protein 223425 5537647 Rcas_0186 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430337.1 222949 R 383372 CDS YP_001430338.1 156740209 5537648 complement(223422..224489) 1 NC_009767.1 PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_0364 protein of unknown function DUF324; hypothetical protein 224489 5537648 Rcas_0187 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430338.1 223422 R 383372 CDS YP_001430339.1 156740210 5537649 complement(224482..225348) 1 NC_009767.1 TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_0365 CRISPR-associated RAMP protein, SSO1426 family; CRISPR-associated Csm3 family protein 225348 5537649 Rcas_0188 Roseiflexus castenholzii DSM 13941 CRISPR-associated Csm3 family protein YP_001430339.1 224482 R 383372 CDS YP_001430340.1 156740211 5537650 complement(225338..225802) 1 NC_009767.1 KEGG: rrs:RoseRS_0366 hypothetical protein; hypothetical protein 225802 5537650 Rcas_0189 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430340.1 225338 R 383372 CDS YP_001430341.1 156740212 5537651 complement(225783..226958) 1 NC_009767.1 KEGG: rrs:RoseRS_0367 hypothetical protein; hypothetical protein 226958 5537651 Rcas_0190 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430341.1 225783 R 383372 CDS YP_001430342.1 156740213 5537652 complement(226958..227602) 1 NC_009767.1 PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_0368 protein of unknown function DUF324; hypothetical protein 227602 5537652 Rcas_0191 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430342.1 226958 R 383372 CDS YP_001430343.1 156740214 5537653 complement(227583..229766) 1 NC_009767.1 KEGG: rrs:RoseRS_0369 hydrolase of the HD superfamily (permuted catalytic motifs)-like protein; hydrolase 229766 5537653 Rcas_0192 Roseiflexus castenholzii DSM 13941 hydrolase YP_001430343.1 227583 R 383372 CDS YP_001430344.1 156740215 5537654 complement(230217..231206) 1 NC_009767.1 KEGG: rrs:RoseRS_0370 hypothetical protein; hypothetical protein 231206 5537654 Rcas_0193 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430344.1 230217 R 383372 CDS YP_001430345.1 156740216 5537655 231851..233209 1 NC_009767.1 KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 233209 5537655 Rcas_0194 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430345.1 231851 D 383372 CDS YP_001430346.1 156740217 5537656 complement(233235..234803) 1 NC_009767.1 KEGG: rrs:RoseRS_0095 hypothetical protein; hypothetical protein 234803 5537656 Rcas_0195 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430346.1 233235 R 383372 CDS YP_001430347.1 156740218 5537657 complement(234776..236122) 1 NC_009767.1 PFAM: peptidase M20; KEGG: rrs:RoseRS_0094 peptidase M20; peptidase M20 236122 5537657 Rcas_0196 Roseiflexus castenholzii DSM 13941 peptidase M20 YP_001430347.1 234776 R 383372 CDS YP_001430348.1 156740219 5537658 236232..238049 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_0093 extracellular solute-binding protein, family 5; extracellular solute-binding protein 238049 5537658 Rcas_0197 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001430348.1 236232 D 383372 CDS YP_001430349.1 156740220 5537659 238604..242422 1 NC_009767.1 KEGG: rrs:RoseRS_0091 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 242422 5537659 Rcas_0198 Roseiflexus castenholzii DSM 13941 DNA polymerase III subunit alpha YP_001430349.1 238604 D 383372 CDS YP_001430350.1 156740221 5537660 complement(242429..243553) 1 NC_009767.1 PFAM: nuclease (SNase domain protein); KEGG: rrs:RoseRS_0374 nuclease (SNase domain protein); nuclease 243553 5537660 Rcas_0199 Roseiflexus castenholzii DSM 13941 nuclease YP_001430350.1 242429 R 383372 CDS YP_001430351.1 156740222 5537661 complement(243637..244752) 1 NC_009767.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_3872 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 244752 5537661 Rcas_0200 Roseiflexus castenholzii DSM 13941 histidinol-phosphate aminotransferase YP_001430351.1 243637 R 383372 CDS YP_001430352.1 156740223 5537662 complement(245549..247930) 1 NC_009767.1 PFAM: Carbohydrate-binding CenC domain protein; Laminin G sub domain 2; SMART: Laminin G; LamG domain protein jellyroll fold domain protein; KEGG: rrs:RoseRS_3871 laminin G, sub domain 2; laminin G 247930 5537662 Rcas_0201 Roseiflexus castenholzii DSM 13941 laminin G YP_001430352.1 245549 R 383372 CDS YP_001430353.1 156740224 5537663 248862..249635 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3870 glycosyl transferase, family 2; glycosyl transferase family protein 249635 5537663 Rcas_0202 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430353.1 248862 D 383372 CDS YP_001430354.1 156740225 5537664 249681..250685 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3869 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 250685 5537664 Rcas_0203 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001430354.1 249681 D 383372 CDS YP_001430355.1 156740226 5537665 250704..251861 1 NC_009767.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_3868 glutamine--scyllo-inositol transaminase; glutamine--scyllo-inositol transaminase 251861 5537665 Rcas_0204 Roseiflexus castenholzii DSM 13941 glutamine--scyllo-inositol transaminase YP_001430355.1 250704 D 383372 CDS YP_001430356.1 156740227 5537666 252151..254355 1 NC_009767.1 KEGG: rrs:RoseRS_3867 hypothetical protein; hypothetical protein 254355 5537666 Rcas_0205 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430356.1 252151 D 383372 CDS YP_001430357.1 156740228 5537667 254408..254932 1 NC_009767.1 PFAM: OsmC family protein; KEGG: rrs:RoseRS_3865 OsmC family protein; OsmC family protein 254932 5537667 Rcas_0206 Roseiflexus castenholzii DSM 13941 OsmC family protein YP_001430357.1 254408 D 383372 CDS YP_001430358.1 156740229 5537668 complement(255080..256603) 1 NC_009767.1 KEGG: rrs:RoseRS_0697 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 256603 5537668 Rcas_0207 Roseiflexus castenholzii DSM 13941 inosine-5'-monophosphate dehydrogenase YP_001430358.1 255080 R 383372 CDS YP_001430359.1 156740230 5537669 complement(256814..258535) 1 NC_009767.1 KEGG: ana:all4128 unknown protein; hypothetical protein 258535 5537669 Rcas_0208 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430359.1 256814 R 383372 CDS YP_001430360.1 156740231 5537671 258894..259826 1 NC_009767.1 PFAM: PfkB domain protein; KEGG: rrs:RoseRS_0693 1-phosphofructokinase; 1-phosphofructokinase 259826 5537671 Rcas_0209 Roseiflexus castenholzii DSM 13941 1-phosphofructokinase YP_001430360.1 258894 D 383372 CDS YP_001430361.1 156740232 5537672 259981..261024 1 NC_009767.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_0692 ATPase associated with various cellular activities, AAA_3; ATPase 261024 5537672 Rcas_0210 Roseiflexus castenholzii DSM 13941 ATPase YP_001430361.1 259981 D 383372 CDS YP_001430362.1 156740233 5537673 complement(261027..261710) 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0691 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 261710 5537673 Rcas_0211 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001430362.1 261027 R 383372 CDS YP_001430363.1 156740234 5537674 261991..263247 1 NC_009767.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rrs:RoseRS_0690 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 263247 5537674 Rcas_0212 Roseiflexus castenholzii DSM 13941 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001430363.1 261991 D 383372 CDS YP_001430364.1 156740235 5537675 263360..264742 1 NC_009767.1 KEGG: rrs:RoseRS_0689 hypothetical protein; hypothetical protein 264742 5537675 Rcas_0213 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430364.1 263360 D 383372 CDS YP_001430365.1 156740236 5537676 264776..265093 1 NC_009767.1 KEGG: rrs:RoseRS_0688 hypothetical protein; hypothetical protein 265093 5537676 Rcas_0214 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430365.1 264776 D 383372 CDS YP_001430366.1 156740237 5537677 265160..271948 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: RNA-processing protein HAT helix repeating-containing protein; PBS lyase HEAT domain protein repeat-containing protein; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0687 tetratricopeptide TPR_2 repeat protein; hypothetical protein 271948 5537677 Rcas_0215 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430366.1 265160 D 383372 CDS YP_001430367.1 156740238 5537678 272115..274709 1 NC_009767.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rrs:RoseRS_0686 hypothetical protein; hypothetical protein 274709 5537678 Rcas_0216 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430367.1 272115 D 383372 CDS YP_001430368.1 156740239 5537679 complement(274988..275689) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0685 protein of unknown function DUF820; hypothetical protein 275689 5537679 Rcas_0217 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430368.1 274988 R 383372 CDS YP_001430369.1 156740240 5537680 complement(276017..277459) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0683 glycosyl transferase, group 1; group 1 glycosyl transferase 277459 5537680 Rcas_0218 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430369.1 276017 R 383372 CDS YP_001430370.1 156740241 5537681 complement(277462..277938) 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_0682 NUDIX hydrolase; NUDIX hydrolase 277938 5537681 Rcas_0219 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001430370.1 277462 R 383372 CDS YP_001430371.1 156740242 5537682 278059..278193 1 NC_009767.1 KEGG: rrs:RoseRS_0681 hypothetical protein; hypothetical protein 278193 5537682 Rcas_0220 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430371.1 278059 D 383372 CDS YP_001430372.1 156740243 5537683 278200..279036 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0680 metallophosphoesterase; metallophosphoesterase 279036 5537683 Rcas_0221 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001430372.1 278200 D 383372 CDS YP_001430373.1 156740244 5537684 279033..279581 1 NC_009767.1 KEGG: rrs:RoseRS_0679 hypothetical protein; hypothetical protein 279581 5537684 Rcas_0222 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430373.1 279033 D 383372 CDS YP_001430374.1 156740245 5537685 279585..281126 1 NC_009767.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Forkhead-associated protein; KEGG: rrs:RoseRS_0678 peptidase S8 and S53, subtilisin, kexin, sedolisin; FHA domain-containing protein 281126 5537685 Rcas_0223 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001430374.1 279585 D 383372 CDS YP_001430375.1 156740246 5537686 complement(281852..282343) 1 NC_009767.1 KEGG: rrs:RoseRS_0607 hypothetical protein; hypothetical protein 282343 5537686 Rcas_0224 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430375.1 281852 R 383372 CDS YP_001430376.1 156740247 5537687 complement(282538..283413) 1 NC_009767.1 KEGG: rrs:RoseRS_0608 hypothetical protein; hypothetical protein 283413 5537687 Rcas_0225 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430376.1 282538 R 383372 CDS YP_001430377.1 156740248 5537688 complement(283406..284323) 1 NC_009767.1 PFAM: ApbE family lipoprotein; KEGG: rrs:RoseRS_0609 ApbE family lipoprotein; ApbE family lipoprotein 284323 5537688 Rcas_0226 Roseiflexus castenholzii DSM 13941 ApbE family lipoprotein YP_001430377.1 283406 R 383372 CDS YP_001430378.1 156740249 5537689 complement(284371..284790) 1 NC_009767.1 KEGG: rrs:RoseRS_0610 hypothetical protein; hypothetical protein 284790 5537689 Rcas_0227 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430378.1 284371 R 383372 CDS YP_001430379.1 156740250 5537690 complement(285008..285832) 1 NC_009767.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: rrs:RoseRS_0611 propeptide, PepSY amd peptidase M4; peptidase 285832 5537690 Rcas_0228 Roseiflexus castenholzii DSM 13941 peptidase YP_001430379.1 285008 R 383372 CDS YP_001430380.1 156740251 5537691 285998..286681 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0612 two component transcriptional regulator, winged helix family; two component transcriptional regulator 286681 5537691 Rcas_0229 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001430380.1 285998 D 383372 CDS YP_001430381.1 156740252 5537692 286674..288101 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0613 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 288101 5537692 Rcas_0230 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001430381.1 286674 D 383372 CDS YP_001430382.1 156740253 5537693 complement(288298..288729) 1 NC_009767.1 KEGG: det:DET0408 cation channel family protein; cation channel family protein 288729 5537693 Rcas_0231 Roseiflexus castenholzii DSM 13941 cation channel family protein YP_001430382.1 288298 R 383372 CDS YP_001430383.1 156740254 5537694 complement(288729..289787) 1 NC_009767.1 PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: rrs:RoseRS_0349 peptidase M42 family protein; peptidase M42 family protein 289787 5537694 Rcas_0232 Roseiflexus castenholzii DSM 13941 peptidase M42 family protein YP_001430383.1 288729 R 383372 CDS YP_001430384.1 156740255 5537695 complement(290020..290274) 1 NC_009767.1 hypothetical protein 290274 5537695 Rcas_0233 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430384.1 290020 R 383372 CDS YP_001430385.1 156740256 5537696 290346..291398 1 NC_009767.1 PFAM: proline racemase; KEGG: sus:Acid_6579 proline racemase; proline racemase 291398 5537696 Rcas_0234 Roseiflexus castenholzii DSM 13941 proline racemase YP_001430385.1 290346 D 383372 CDS YP_001430386.1 156740257 5537697 complement(291520..292656) 1 NC_009767.1 KEGG: rrs:RoseRS_0306 hypothetical protein; hypothetical protein 292656 5537697 Rcas_0235 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430386.1 291520 R 383372 CDS YP_001430387.1 156740258 5537698 complement(292656..293939) 1 NC_009767.1 PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: rrs:RoseRS_0307 glycoside hydrolase, family 18; glycoside hydrolase family protein 293939 5537698 Rcas_0236 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001430387.1 292656 R 383372 CDS YP_001430388.1 156740259 5537699 complement(293967..294332) 1 NC_009767.1 PFAM: protein of unknown function DUF1025; KEGG: rrs:RoseRS_0308 protein of unknown function DUF1025; hypothetical protein 294332 5537699 Rcas_0237 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430388.1 293967 R 383372 CDS YP_001430389.1 156740260 5537700 complement(294460..295053) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0309 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 295053 5537700 Rcas_0238 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001430389.1 294460 R 383372 CDS YP_001430390.1 156740261 5537701 295732..296388 1 NC_009767.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rrs:RoseRS_0310 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 296388 5537701 Rcas_0239 Roseiflexus castenholzii DSM 13941 phosphate uptake regulator PhoU YP_001430390.1 295732 D 383372 CDS YP_001430391.1 156740262 5537702 296385..296666 1 NC_009767.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 296666 5537702 Rcas_0240 Roseiflexus castenholzii DSM 13941 acylphosphatase YP_001430391.1 296385 D 383372 CDS YP_001430392.1 156740263 5537703 complement(296656..297480) 1 NC_009767.1 PFAM: luciferase family protein; KEGG: mbo:Mb0815c hypothetical protein; luciferase family protein 297480 5537703 Rcas_0241 Roseiflexus castenholzii DSM 13941 luciferase family protein YP_001430392.1 296656 R 383372 CDS YP_001430393.1 156740264 5537704 297647..298492 1 NC_009767.1 KEGG: rrs:RoseRS_0312 hypothetical protein; hypothetical protein 298492 5537704 Rcas_0242 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430393.1 297647 D 383372 CDS YP_001430394.1 156740265 5537705 298994..299434 1 NC_009767.1 KEGG: rrs:RoseRS_0313 hypothetical protein; hypothetical protein 299434 5537705 Rcas_0243 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430394.1 298994 D 383372 CDS YP_001430395.1 156740266 5537706 299460..300173 1 NC_009767.1 KEGG: rrs:RoseRS_0314 hypothetical protein; hypothetical protein 300173 5537706 Rcas_0244 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430395.1 299460 D 383372 CDS YP_001430396.1 156740267 5537707 complement(300654..303134) 1 NC_009767.1 PFAM: transglutaminase domain protein; KEGG: rrs:RoseRS_0315 transglutaminase domain protein; transglutaminase domain-containing protein 303134 5537707 Rcas_0245 Roseiflexus castenholzii DSM 13941 transglutaminase domain-containing protein YP_001430396.1 300654 R 383372 CDS YP_001430397.1 156740268 5537708 complement(303131..303907) 1 NC_009767.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: rrs:RoseRS_0316 hydrolase, TatD family; TatD family hydrolase 303907 5537708 Rcas_0246 Roseiflexus castenholzii DSM 13941 TatD family hydrolase YP_001430397.1 303131 R 383372 CDS YP_001430398.1 156740269 5537709 303969..305192 1 NC_009767.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0317 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 305192 5537709 Rcas_0247 Roseiflexus castenholzii DSM 13941 response regulator receiver sensor signal transduction histidine kinase YP_001430398.1 303969 D 383372 CDS YP_001430399.1 156740270 5537710 305352..305930 1 NC_009767.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: rrs:RoseRS_0318 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase 305930 5537710 Rcas_0248 Roseiflexus castenholzii DSM 13941 uracil-DNA glycosylase YP_001430399.1 305352 D 383372 CDS YP_001430400.1 156740271 5537711 305927..307078 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_0319 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 307078 5537711 Rcas_0249 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001430400.1 305927 D 383372 CDS YP_001430401.1 156740272 5537712 complement(307381..308346) 1 NC_009767.1 KEGG: rrs:RoseRS_0294 hypothetical protein; hypothetical protein 308346 5537712 Rcas_0250 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430401.1 307381 R 383372 CDS YP_001430402.1 156740273 5537713 complement(308356..309870) 1 NC_009767.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: rrs:RoseRS_0293 peptidase M1, membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase 309870 5537713 Rcas_0251 Roseiflexus castenholzii DSM 13941 peptidase M1 membrane alanine aminopeptidase YP_001430402.1 308356 R 383372 CDS YP_001430403.1 156740274 5537714 309959..310615 1 NC_009767.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rrs:RoseRS_0292 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 310615 5537714 Rcas_0252 Roseiflexus castenholzii DSM 13941 Crp/FNR family transcriptional regulator YP_001430403.1 309959 D 383372 CDS YP_001430404.1 156740275 5537715 310955..311191 1 NC_009767.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_0291 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 311191 5537715 Rcas_0253 Roseiflexus castenholzii DSM 13941 4Fe-4S ferredoxin YP_001430404.1 310955 D 383372 CDS YP_001430405.1 156740276 5537716 311923..312399 1 NC_009767.1 KEGG: rrs:RoseRS_0290 hypothetical protein; hypothetical protein 312399 5537716 Rcas_0254 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430405.1 311923 D 383372 CDS YP_001430406.1 156740277 5537717 312484..313557 1 NC_009767.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 313557 5537717 Rcas_0255 Roseiflexus castenholzii DSM 13941 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001430406.1 312484 D 383372 CDS YP_001430407.1 156740278 5537718 313588..315546 1 NC_009767.1 KEGG: rrs:RoseRS_0288 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 315546 5537718 Rcas_0256 Roseiflexus castenholzii DSM 13941 DNA primase YP_001430407.1 313588 D 383372 CDS YP_001430408.1 156740279 5537719 315712..317337 1 NC_009767.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: Bacterio-opsin activator HTH domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_0287 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 317337 5537719 Rcas_0257 Roseiflexus castenholzii DSM 13941 RpoD family RNA polymerase sigma factor YP_001430408.1 315712 D 383372 CDS YP_001430409.1 156740280 5537720 317384..318739 1 NC_009767.1 PFAM: heat shock protein DnaJ domain protein; KEGG: rrs:RoseRS_0286 heat shock protein DnaJ domain protein; molecular chaperone DnaJ 318739 5537720 Rcas_0258 Roseiflexus castenholzii DSM 13941 molecular chaperone DnaJ YP_001430409.1 317384 D 383372 CDS YP_001430410.1 156740281 5537721 318739..319881 1 NC_009767.1 KEGG: rrs:RoseRS_0285 glycoside hydrolase, family 42, N-terminal domain protein; glycoside hydrolase family 42 protein 319881 5537721 Rcas_0259 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family 42 protein YP_001430410.1 318739 D 383372 CDS YP_001430411.1 156740282 5537722 320038..320673 1 NC_009767.1 KEGG: rrs:RoseRS_0284 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; molybdopterin-guanine dinucleotide biosynthesis protein A-like protein 320673 5537722 Rcas_0260 Roseiflexus castenholzii DSM 13941 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein YP_001430411.1 320038 D 383372 CDS YP_001430412.1 156740283 5537723 320673..322208 1 NC_009767.1 KEGG: rrs:RoseRS_0283 hypothetical protein; hypothetical protein 322208 5537723 Rcas_0261 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430412.1 320673 D 383372 CDS YP_001430413.1 156740284 5537724 322195..323031 1 NC_009767.1 KEGG: rrs:RoseRS_0282 hypothetical protein; hypothetical protein 323031 5537724 Rcas_0262 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430413.1 322195 D 383372 CDS YP_001430414.1 156740285 5537725 complement(324618..326192) 1 NC_009767.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 326192 5537725 Rcas_0263 Roseiflexus castenholzii DSM 13941 D-3-phosphoglycerate dehydrogenase YP_001430414.1 324618 R 383372 CDS YP_001430415.1 156740286 5537726 complement(326968..329346) 1 NC_009767.1 PFAM: regulator of chromosome condensation RCC1; KEGG: rrs:RoseRS_0421 regulator of chromosome condensation, RCC1; regulator of chromosome condensation RCC1 329346 5537726 Rcas_0264 Roseiflexus castenholzii DSM 13941 regulator of chromosome condensation RCC1 YP_001430415.1 326968 R 383372 CDS YP_001430416.1 156740287 5537727 330058..332067 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: rrs:RoseRS_0270 TAP domain protein; TAP domain-containing protein 332067 5537727 Rcas_0265 Roseiflexus castenholzii DSM 13941 TAP domain-containing protein YP_001430416.1 330058 D 383372 CDS YP_001430417.1 156740288 5537728 complement(332392..333636) 1 NC_009767.1 PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_0269 protein of unknown function DUF214; hypothetical protein 333636 5537728 Rcas_0266 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430417.1 332392 R 383372 CDS YP_001430418.1 156740289 5537729 complement(333643..334476) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0268 ABC transporter related; ABC transporter-like protein 334476 5537729 Rcas_0267 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430418.1 333643 R 383372 CDS YP_001430419.1 156740290 5537730 complement(334542..336305) 1 NC_009767.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_0267 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 336305 5537730 Rcas_0268 Roseiflexus castenholzii DSM 13941 RND family efflux transporter MFP subunit YP_001430419.1 334542 R 383372 CDS YP_001430420.1 156740291 5537731 complement(336394..337017) 1 NC_009767.1 PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_0266 transcriptional regulator, TetR family; TetR family transcriptional regulator 337017 5537731 Rcas_0269 Roseiflexus castenholzii DSM 13941 TetR family transcriptional regulator YP_001430420.1 336394 R 383372 CDS YP_001430421.1 156740292 5537732 complement(337614..337820) 1 NC_009767.1 KEGG: gvi:gsr0563 unknown protein; hypothetical protein 337820 5537732 Rcas_0270 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430421.1 337614 R 383372 CDS YP_001430422.1 156740293 5537733 complement(337817..338101) 1 NC_009767.1 KEGG: gvi:gsr0562 unknown protein; hypothetical protein 338101 5537733 Rcas_0271 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430422.1 337817 R 383372 CDS YP_001430423.1 156740294 5537734 complement(338405..339958) 1 NC_009767.1 PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_0265 aldehyde dehydrogenase (NAD(+)); aldehyde dehydrogenase 339958 5537734 Rcas_0272 Roseiflexus castenholzii DSM 13941 aldehyde dehydrogenase YP_001430423.1 338405 R 383372 CDS YP_001430424.1 156740295 5537735 complement(339936..340355) 1 NC_009767.1 hypothetical protein 340355 5537735 Rcas_0273 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430424.1 339936 R 383372 CDS YP_001430425.1 156740296 5537736 340472..341791 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_0263 extracellular solute-binding protein, family 1; extracellular solute-binding protein 341791 5537736 Rcas_0274 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001430425.1 340472 D 383372 CDS YP_001430426.1 156740297 5537737 342152..342592 1 NC_009767.1 KEGG: rrs:RoseRS_0262 hypothetical protein; hypothetical protein 342592 5537737 Rcas_0275 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430426.1 342152 D 383372 CDS YP_001430427.1 156740298 5537738 342589..344184 1 NC_009767.1 KEGG: gme:Gmet_0588 TPR repeat protein; hypothetical protein 344184 5537738 Rcas_0276 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430427.1 342589 D 383372 CDS YP_001430428.1 156740299 5537739 complement(344712..345023) 1 NC_009767.1 hypothetical protein 345023 5537739 Rcas_0277 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430428.1 344712 R 383372 CDS YP_001430429.1 156740300 5537740 complement(345122..345454) 1 NC_009767.1 PFAM: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0258 transcriptional regulator, XRE family; XRE family transcriptional regulator 345454 5537740 Rcas_0278 Roseiflexus castenholzii DSM 13941 XRE family transcriptional regulator YP_001430429.1 345122 R 383372 CDS YP_001430430.1 156740301 5537741 345633..346259 1 NC_009767.1 KEGG: rrs:RoseRS_0257 hypothetical protein; hypothetical protein 346259 5537741 Rcas_0279 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430430.1 345633 D 383372 CDS YP_001430431.1 156740302 5537742 346410..346775 1 NC_009767.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: rrs:RoseRS_0256 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 346775 5537742 Rcas_0280 Roseiflexus castenholzii DSM 13941 TraR/DksA family transcriptional regulator YP_001430431.1 346410 D 383372 CDS YP_001430432.1 156740303 5537743 347333..347908 1 NC_009767.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 347908 5537743 Rcas_0281 Roseiflexus castenholzii DSM 13941 lipoprotein signal peptidase YP_001430432.1 347333 D 383372 CDS YP_001430433.1 156740304 5537744 348141..349088 1 NC_009767.1 KEGG: rrs:RoseRS_0254 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 349088 5537744 Rcas_0282 Roseiflexus castenholzii DSM 13941 RluA family pseudouridine synthase YP_001430433.1 348141 D 383372 CDS YP_001430434.1 156740305 5537745 349705..350634 1 NC_009767.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 350634 5537745 Rcas_0283 Roseiflexus castenholzii DSM 13941 malate dehydrogenase YP_001430434.1 349705 D 383372 CDS YP_001430435.1 156740306 5537746 350981..352756 1 NC_009767.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_0252 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 352756 5537746 Rcas_0284 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001430435.1 350981 D 383372 CDS YP_001430436.1 156740307 5537747 352753..353661 1 NC_009767.1 KEGG: rrs:RoseRS_0251 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase 353661 5537747 Rcas_0285 Roseiflexus castenholzii DSM 13941 dimethyladenosine transferase YP_001430436.1 352753 D 383372 CDS YP_001430437.1 156740308 5537748 complement(354092..354769) 1 NC_009767.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_0250 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 354769 5537748 Rcas_0286 Roseiflexus castenholzii DSM 13941 HAD family hydrolase YP_001430437.1 354092 R 383372 CDS YP_001430438.1 156740309 5537749 complement(354791..356029) 1 NC_009767.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_0249 cell envelope-related transcriptional attenuator; cell envelope-like transcriptional attenuator 356029 5537749 Rcas_0287 Roseiflexus castenholzii DSM 13941 cell envelope-like transcriptional attenuator YP_001430438.1 354791 R 383372 CDS YP_001430439.1 156740310 5537750 356838..357866 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0248 metallophosphoesterase; metallophosphoesterase 357866 5537750 Rcas_0288 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001430439.1 356838 D 383372 CDS YP_001430440.1 156740311 5537751 358610..359035 1 NC_009767.1 KEGG: rrs:RoseRS_0246 hypothetical protein; hypothetical protein 359035 5537751 Rcas_0289 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430440.1 358610 D 383372 CDS YP_001430441.1 156740312 5537752 359131..359793 1 NC_009767.1 PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_0245 phosphoglycerate mutase; phosphoglycerate mutase 359793 5537752 Rcas_0290 Roseiflexus castenholzii DSM 13941 phosphoglycerate mutase YP_001430441.1 359131 D 383372 CDS YP_001430442.1 156740313 5537753 359780..360463 1 NC_009767.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rrs:RoseRS_0244 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 360463 5537753 Rcas_0291 Roseiflexus castenholzii DSM 13941 Crp/FNR family transcriptional regulator YP_001430442.1 359780 D 383372 CDS YP_001430443.1 156740314 5537754 360543..363041 1 NC_009767.1 PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_0243 glycosyl transferase, family 39; glycosyl transferase family protein 363041 5537754 Rcas_0292 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430443.1 360543 D 383372 CDS YP_001430444.1 156740315 5537755 363141..366632 1 NC_009767.1 PFAM: NHL repeat containing protein; KEGG: rrs:RoseRS_0242 NHL repeat containing protein; NHL repeat-containing protein 366632 5537755 Rcas_0293 Roseiflexus castenholzii DSM 13941 NHL repeat-containing protein YP_001430444.1 363141 D 383372 CDS YP_001430445.1 156740316 5537756 complement(366768..366983) 1 NC_009767.1 TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: rrs:RoseRS_0698 copper ion binding protein; copper ion binding protein 366983 5537756 Rcas_0294 Roseiflexus castenholzii DSM 13941 copper ion binding protein YP_001430445.1 366768 R 383372 CDS YP_001430446.1 156740317 5537757 367213..368679 1 NC_009767.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 368679 5537757 Rcas_0295 Roseiflexus castenholzii DSM 13941 leucyl aminopeptidase YP_001430446.1 367213 D 383372 CDS YP_001430447.1 156740318 5537758 368692..369540 1 NC_009767.1 KEGG: rrs:RoseRS_0700 hypothetical protein; hypothetical protein 369540 5537758 Rcas_0296 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430447.1 368692 D 383372 CDS YP_001430448.1 156740319 5537759 369541..370353 1 NC_009767.1 KEGG: rrs:RoseRS_0701 membrane protein-like protein; hypothetical protein 370353 5537759 Rcas_0297 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430448.1 369541 D 383372 CDS YP_001430449.1 156740320 5537760 complement(371030..372025) 1 NC_009767.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rrs:RoseRS_0702 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 372025 5537760 Rcas_0298 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated metal dependent phosphohydrolase YP_001430449.1 371030 R 383372 CDS YP_001430450.1 156740321 5537761 372303..373475 1 NC_009767.1 PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_0703 aminotransferase, class I and II; class I/II aminotransferase 373475 5537761 Rcas_0299 Roseiflexus castenholzii DSM 13941 class I/II aminotransferase YP_001430450.1 372303 D 383372 CDS YP_001430451.1 156740322 5537762 375202..376044 1 NC_009767.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rrs:RoseRS_0704 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; 6-pyruvoyl tetrahydropterin synthase 376044 5537762 Rcas_0300 Roseiflexus castenholzii DSM 13941 6-pyruvoyl tetrahydropterin synthase YP_001430451.1 375202 D 383372 CDS YP_001430452.1 156740323 5537763 376114..376791 1 NC_009767.1 PFAM: GTP cyclohydrolase I; KEGG: rrs:RoseRS_0705 GTP cyclohydrolase I; GTP cyclohydrolase I 376791 5537763 Rcas_0301 Roseiflexus castenholzii DSM 13941 GTP cyclohydrolase I YP_001430452.1 376114 D 383372 CDS YP_001430453.1 156740324 5537764 377364..378062 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0706 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 378062 5537764 Rcas_0302 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001430453.1 377364 D 383372 CDS YP_001430454.1 156740325 5537765 379069..379698 1 NC_009767.1 PFAM: regulatory protein MarR; regulatory protein DeoR; regulatory protein ArsR; transcriptional regulator TrmB; KEGG: rrs:RoseRS_0707 transcriptional regulator, TrmB; transcriptional regulator TrmB 379698 5537765 Rcas_0303 Roseiflexus castenholzii DSM 13941 transcriptional regulator TrmB YP_001430454.1 379069 D 383372 CDS YP_001430455.1 156740326 5537766 379755..380537 1 NC_009767.1 KEGG: rrs:RoseRS_0708 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 380537 5537766 Rcas_0304 Roseiflexus castenholzii DSM 13941 FeS assembly ATPase SufC YP_001430455.1 379755 D 383372 CDS YP_001430456.1 156740327 5537767 380534..381751 1 NC_009767.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: rrs:RoseRS_0709 FeS assembly protein SufD; FeS assembly protein SufD 381751 5537767 Rcas_0305 Roseiflexus castenholzii DSM 13941 FeS assembly protein SufD YP_001430456.1 380534 D 383372 CDS YP_001430457.1 156740328 5537768 381822..383066 1 NC_009767.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_0710 cysteine desulfurase, SufS subfamily; SufS subfamily cysteine desulfurase 383066 5537768 Rcas_0306 Roseiflexus castenholzii DSM 13941 SufS subfamily cysteine desulfurase YP_001430457.1 381822 D 383372 CDS YP_001430458.1 156740329 5537769 383072..383470 1 NC_009767.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: rrs:RoseRS_0711 SUF system FeS assembly protein, NifU family; NifU family SUF system FeS assembly protein 383470 5537769 Rcas_0307 Roseiflexus castenholzii DSM 13941 NifU family SUF system FeS assembly protein YP_001430458.1 383072 D 383372 CDS YP_001430459.1 156740330 5537770 383498..384913 1 NC_009767.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: rrs:RoseRS_0712 FeS assembly protein SufB; FeS assembly protein SufB 384913 5537770 Rcas_0308 Roseiflexus castenholzii DSM 13941 FeS assembly protein SufB YP_001430459.1 383498 D 383372 CDS YP_001430460.1 156740331 5537771 complement(385266..385994) 1 NC_009767.1 KEGG: rrs:RoseRS_1209 hypothetical protein; hypothetical protein 385994 5537771 Rcas_0309 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430460.1 385266 R 383372 CDS YP_001430461.1 156740332 5537772 386385..386795 1 NC_009767.1 KEGG: rrs:RoseRS_0715 hypothetical protein; hypothetical protein 386795 5537772 Rcas_0310 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430461.1 386385 D 383372 CDS YP_001430462.1 156740333 5537773 386968..387285 1 NC_009767.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_0716 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 387285 5537773 Rcas_0311 Roseiflexus castenholzii DSM 13941 Rieske (2Fe-2S) domain-containing protein YP_001430462.1 386968 D 383372 CDS YP_001430463.1 156740334 5537774 387380..388225 1 NC_009767.1 PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_0717 rhodanese domain protein; rhodanese domain-containing protein 388225 5537774 Rcas_0312 Roseiflexus castenholzii DSM 13941 rhodanese domain-containing protein YP_001430463.1 387380 D 383372 CDS YP_001430464.1 156740335 5537775 388230..388688 1 NC_009767.1 PFAM: Fe-S metabolism associated SufE; KEGG: rrs:RoseRS_0718 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 388688 5537775 Rcas_0313 Roseiflexus castenholzii DSM 13941 Fe-S metabolism associated SufE YP_001430464.1 388230 D 383372 CDS YP_001430465.1 156740336 5537776 388688..389092 1 NC_009767.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: rrs:RoseRS_0719 nitrogen-fixing NifU domain protein; NifU family SUF system FeS assembly protein 389092 5537776 Rcas_0314 Roseiflexus castenholzii DSM 13941 NifU family SUF system FeS assembly protein YP_001430465.1 388688 D 383372 CDS YP_001430466.1 156740337 5537777 389082..390038 1 NC_009767.1 TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_0720 cysteine synthase; cysteine synthase 390038 5537777 Rcas_0315 Roseiflexus castenholzii DSM 13941 cysteine synthase YP_001430466.1 389082 D 383372 CDS YP_001430467.1 156740338 5537778 390242..390718 1 NC_009767.1 PFAM: Mov34/MPN/PAD-1 family protein; KEGG: rrs:RoseRS_0721 Mov34/MPN/PAD-1 family protein; Mov34/MPN/PAD-1 family protein 390718 5537778 Rcas_0316 Roseiflexus castenholzii DSM 13941 Mov34/MPN/PAD-1 family protein YP_001430467.1 390242 D 383372 CDS YP_001430468.1 156740339 5537779 390936..391217 1 NC_009767.1 PFAM: thiamineS protein; KEGG: rrs:RoseRS_0722 thiamineS protein; hypothetical protein 391217 5537779 Rcas_0317 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430468.1 390936 D 383372 CDS YP_001430469.1 156740340 5537780 391241..392392 1 NC_009767.1 PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: rrs:RoseRS_0723 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 392392 5537780 Rcas_0318 Roseiflexus castenholzii DSM 13941 UBA/THIF-type NAD/FAD binding protein YP_001430469.1 391241 D 383372 CDS YP_001430470.1 156740341 5537781 392463..392672 1 NC_009767.1 KEGG: rrs:RoseRS_0724 hypothetical protein; preprotein translocase subunit SecG 392672 secG 5537781 secG Roseiflexus castenholzii DSM 13941 preprotein translocase subunit SecG YP_001430470.1 392463 D 383372 CDS YP_001430471.1 156740342 5537782 392797..394467 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_0725 extracellular solute-binding protein, family 5; extracellular solute-binding protein 394467 5537782 Rcas_0320 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001430471.1 392797 D 383372 CDS YP_001430472.1 156740343 5537783 394720..395586 1 NC_009767.1 PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_0726 rhodanese domain protein; rhodanese domain-containing protein 395586 5537783 Rcas_0321 Roseiflexus castenholzii DSM 13941 rhodanese domain-containing protein YP_001430472.1 394720 D 383372 CDS YP_001430473.1 156740344 5537784 396028..399267 1 NC_009767.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: rrs:RoseRS_0727 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 399267 5537784 Rcas_0322 Roseiflexus castenholzii DSM 13941 isoleucyl-tRNA synthetase YP_001430473.1 396028 D 383372 CDS YP_001430474.1 156740345 5537785 399463..400617 1 NC_009767.1 hypothetical protein 400617 5537785 Rcas_0323 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430474.1 399463 D 383372 CDS YP_001430475.1 156740346 5537786 complement(400642..401307) 1 NC_009767.1 hypothetical protein 401307 5537786 Rcas_0324 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430475.1 400642 R 383372 CDS YP_001430476.1 156740347 5537788 402273..403154 1 NC_009767.1 KEGG: mlo:mlr4706 hypothetical protein; hypothetical protein 403154 5537788 Rcas_0326 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430476.1 402273 D 383372 CDS YP_001430477.1 156740348 5537789 403157..403870 1 NC_009767.1 PFAM: Gp37Gp68 family protein; KEGG: cph:Cpha266_1493 phage Gp37Gp68 family protein; Gp37Gp68 family protein 403870 5537789 Rcas_0327 Roseiflexus castenholzii DSM 13941 Gp37Gp68 family protein YP_001430477.1 403157 D 383372 CDS YP_001430478.1 156740349 5537790 complement(403944..406415) 1 NC_009767.1 KEGG: rrs:RoseRS_0729 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 406415 5537790 Rcas_0328 Roseiflexus castenholzii DSM 13941 DNA gyrase subunit A YP_001430478.1 403944 R 383372 CDS YP_001430479.1 156740350 5537791 complement(406538..407269) 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0730 metallophosphoesterase; metallophosphoesterase 407269 5537791 Rcas_0329 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001430479.1 406538 R 383372 CDS YP_001430480.1 156740351 5537792 complement(407298..408014) 1 NC_009767.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: rrs:RoseRS_0739 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 408014 5537792 Rcas_0330 Roseiflexus castenholzii DSM 13941 phosphoadenosine phosphosulfate reductase YP_001430480.1 407298 R 383372 CDS YP_001430481.1 156740352 5537793 complement(408326..409756) 1 NC_009767.1 KEGG: rrs:RoseRS_0740 hypothetical protein; hypothetical protein 409756 5537793 Rcas_0331 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430481.1 408326 R 383372 CDS YP_001430482.1 156740353 5537794 complement(409769..410287) 1 NC_009767.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 410287 5537794 Rcas_0332 Roseiflexus castenholzii DSM 13941 adenine phosphoribosyltransferase YP_001430482.1 409769 R 383372 CDS YP_001430483.1 156740354 5537795 complement(410674..411510) 1 NC_009767.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 411510 panC 5537795 panC Roseiflexus castenholzii DSM 13941 pantoate--beta-alanine ligase YP_001430483.1 410674 R 383372 CDS YP_001430484.1 156740355 5537796 complement(411517..412353) 1 NC_009767.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 412353 panB 5537796 panB Roseiflexus castenholzii DSM 13941 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001430484.1 411517 R 383372 CDS YP_001430485.1 156740356 5537797 complement(412429..412797) 1 NC_009767.1 PFAM: Roadblock/LC7 family protein; KEGG: rrs:RoseRS_0746 roadblock/LC7 family protein; roadblock/LC7 family protein 412797 5537797 Rcas_0335 Roseiflexus castenholzii DSM 13941 roadblock/LC7 family protein YP_001430485.1 412429 R 383372 CDS YP_001430486.1 156740357 5537798 complement(413083..415416) 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1529 protein kinase; serine/threonine protein kinase 415416 5537798 Rcas_0336 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001430486.1 413083 R 383372 CDS YP_001430487.1 156740358 5537799 complement(416185..417195) 1 NC_009767.1 PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_0062 beta-lactamase domain protein; beta-lactamase domain-containing protein 417195 5537799 Rcas_0337 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001430487.1 416185 R 383372 CDS YP_001430488.1 156740359 5537800 complement(417185..420766) 1 NC_009767.1 PFAM: transcriptional regulator domain protein; transcriptional activator domain; Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_0063 transcriptional regulator, ATPase, winged helix family; transcriptional regulator 420766 5537800 Rcas_0338 Roseiflexus castenholzii DSM 13941 transcriptional regulator YP_001430488.1 417185 R 383372 CDS YP_001430489.1 156740360 5537801 421132..423015 1 NC_009767.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: rrs:RoseRS_0100 GTP-binding protein TypA; GTP-binding protein TypA 423015 5537801 Rcas_0339 Roseiflexus castenholzii DSM 13941 GTP-binding protein TypA YP_001430489.1 421132 D 383372 CDS YP_001430490.1 156740361 5537802 423169..424647 1 NC_009767.1 KEGG: rrs:RoseRS_4116 allergen V5/TPX-1 family protein; hypothetical protein 424647 5537802 Rcas_0340 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430490.1 423169 D 383372 CDS YP_001430491.1 156740362 5537803 424999..425295 1 NC_009767.1 hypothetical protein 425295 5537803 Rcas_0341 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430491.1 424999 D 383372 CDS YP_001430492.1 156740363 5537804 complement(425502..425759) 1 NC_009767.1 PFAM: acyl-coA-binding protein ACBP; KEGG: rrs:RoseRS_0103 acyl-coA-binding protein, ACBP; acyl-CoA-binding protein 425759 5537804 Rcas_0342 Roseiflexus castenholzii DSM 13941 acyl-CoA-binding protein YP_001430492.1 425502 R 383372 CDS YP_001430493.1 156740364 5537805 complement(425762..426766) 1 NC_009767.1 PFAM: peptidase T2 asparaginase 2; KEGG: rrs:RoseRS_0104 asparaginase; asparaginase 426766 5537805 Rcas_0343 Roseiflexus castenholzii DSM 13941 asparaginase YP_001430493.1 425762 R 383372 CDS YP_001430494.1 156740365 5537806 complement(426799..427398) 1 NC_009767.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rrs:RoseRS_0105 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 427398 5537806 Rcas_0344 Roseiflexus castenholzii DSM 13941 CDP-alcohol phosphatidyltransferase YP_001430494.1 426799 R 383372 CDS YP_001430495.1 156740366 5537807 complement(427400..428119) 1 NC_009767.1 KEGG: rrs:RoseRS_0106 hypothetical protein; hypothetical protein 428119 5537807 Rcas_0345 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430495.1 427400 R 383372 CDS YP_001430496.1 156740367 5537808 complement(428132..428857) 1 NC_009767.1 KEGG: rrs:RoseRS_0107 hypothetical protein; hypothetical protein 428857 5537808 Rcas_0346 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430496.1 428132 R 383372 CDS YP_001430497.1 156740368 5537809 complement(429021..430202) 1 NC_009767.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; KEGG: rrs:RoseRS_0108 competence/damage-inducible protein CinA; competence/damage-inducible protein CinA 430202 5537809 Rcas_0347 Roseiflexus castenholzii DSM 13941 competence/damage-inducible protein CinA YP_001430497.1 429021 R 383372 CDS YP_001430498.1 156740369 5537810 complement(430192..430443) 1 NC_009767.1 KEGG: rrs:RoseRS_0109 hypothetical protein; hypothetical protein 430443 5537810 Rcas_0348 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430498.1 430192 R 383372 CDS YP_001430499.1 156740370 5537811 complement(430457..432244) 1 NC_009767.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: rrs:RoseRS_0110 threonyl-tRNA synthetase; threonyl-tRNA synthetase 432244 5537811 Rcas_0349 Roseiflexus castenholzii DSM 13941 threonyl-tRNA synthetase YP_001430499.1 430457 R 383372 CDS YP_001430500.1 156740371 5537812 complement(432262..432849) 1 NC_009767.1 KEGG: rrs:RoseRS_0111 hypothetical protein; hypothetical protein 432849 5537812 Rcas_0350 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430500.1 432262 R 383372 CDS YP_001430501.1 156740372 5537813 complement(433432..435711) 1 NC_009767.1 PFAM: Na+/solute symporter; KEGG: rrs:RoseRS_0112 Na+/solute symporter; Na+/solute symporter 435711 5537813 Rcas_0351 Roseiflexus castenholzii DSM 13941 Na+/solute symporter YP_001430501.1 433432 R 383372 CDS YP_001430502.1 156740373 5537814 complement(435774..436925) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0113 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 436925 5537814 Rcas_0352 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001430502.1 435774 R 383372 CDS YP_001430503.1 156740374 5537815 complement(437101..437793) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0114 two component transcriptional regulator, winged helix family; two component transcriptional regulator 437793 5537815 Rcas_0353 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001430503.1 437101 R 383372 CDS YP_001430504.1 156740375 5537816 complement(438285..438866) 1 NC_009767.1 PFAM: protein of unknown function DUF151; KEGG: rrs:RoseRS_0115 protein of unknown function DUF151; hypothetical protein 438866 5537816 Rcas_0354 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430504.1 438285 R 383372 CDS YP_001430505.1 156740376 5537817 439138..439938 1 NC_009767.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rrs:RoseRS_0116 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 439938 5537817 Rcas_0355 Roseiflexus castenholzii DSM 13941 cobyrinic acid ac-diamide synthase YP_001430505.1 439138 D 383372 CDS YP_001430506.1 156740377 5537818 439935..440840 1 NC_009767.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: rrs:RoseRS_0117 ParB-like partition protein; parB-like partition protein 440840 5537818 Rcas_0356 Roseiflexus castenholzii DSM 13941 parB-like partition protein YP_001430506.1 439935 D 383372 CDS YP_001430507.1 156740378 5537819 441402..442328 1 NC_009767.1 PFAM: PfkB domain protein; KEGG: bth:BT_3576 ribokinase; ribokinase-like domain-containing protein 442328 5537819 Rcas_0357 Roseiflexus castenholzii DSM 13941 ribokinase-like domain-containing protein YP_001430507.1 441402 D 383372 CDS YP_001430508.1 156740379 5537820 442325..442951 1 NC_009767.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: afu:AF1744 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (PgsA-2); CDP-alcohol phosphatidyltransferase 442951 5537820 Rcas_0358 Roseiflexus castenholzii DSM 13941 CDP-alcohol phosphatidyltransferase YP_001430508.1 442325 D 383372 CDS YP_001430509.1 156740380 5537821 443007..443804 1 NC_009767.1 hypothetical protein 443804 5537821 Rcas_0359 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430509.1 443007 D 383372 CDS YP_001430510.1 156740381 5537822 443972..445921 1 NC_009767.1 hypothetical protein 445921 5537822 Rcas_0360 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430510.1 443972 D 383372 CDS YP_001430511.1 156740382 5537823 445980..447785 1 NC_009767.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rrs:RoseRS_0119 DNA repair protein RecN; DNA repair protein RecN 447785 5537823 Rcas_0361 Roseiflexus castenholzii DSM 13941 DNA repair protein RecN YP_001430511.1 445980 D 383372 CDS YP_001430512.1 156740383 5537824 447823..451050 1 NC_009767.1 PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0120 TPR repeat-containing protein; hypothetical protein 451050 5537824 Rcas_0362 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430512.1 447823 D 383372 CDS YP_001430513.1 156740384 5537825 451429..452352 1 NC_009767.1 PFAM: Auxin Efflux Carrier; KEGG: rrs:RoseRS_0121 auxin efflux carrier; auxin efflux carrier 452352 5537825 Rcas_0363 Roseiflexus castenholzii DSM 13941 auxin efflux carrier YP_001430513.1 451429 D 383372 CDS YP_001430514.1 156740385 5537826 452546..453142 1 NC_009767.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: rrs:RoseRS_0122 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 453142 5537826 Rcas_0364 Roseiflexus castenholzii DSM 13941 tripartite ATP-independent periplasmic transporter DctQ YP_001430514.1 452546 D 383372 CDS YP_001430515.1 156740386 5537827 453152..454486 1 NC_009767.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rrs:RoseRS_0123 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 454486 5537827 Rcas_0365 Roseiflexus castenholzii DSM 13941 TRAP dicarboxylate transporter subunit DctM YP_001430515.1 453152 D 383372 CDS YP_001430516.1 156740387 5537828 complement(455658..455963) 1 NC_009767.1 hypothetical protein 455963 5537828 Rcas_0366 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430516.1 455658 R 383372 CDS YP_001430517.1 156740388 5537829 456114..458837 1 NC_009767.1 TIGRFAM: valyl-tRNA synthetase; KEGG: rrs:RoseRS_0129 valyl-tRNA synthetase; valyl-tRNA synthetase 458837 5537829 Rcas_0367 Roseiflexus castenholzii DSM 13941 valyl-tRNA synthetase YP_001430517.1 456114 D 383372 CDS YP_001430518.1 156740389 5537830 458834..459877 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_0130 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 459877 5537830 Rcas_0368 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001430518.1 458834 D 383372 CDS YP_001430519.1 156740390 5537831 459943..461013 1 NC_009767.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_0131 cell envelope-related transcriptional attenuator; cell envelope-like transcriptional attenuator 461013 5537831 Rcas_0369 Roseiflexus castenholzii DSM 13941 cell envelope-like transcriptional attenuator YP_001430519.1 459943 D 383372 CDS YP_001430520.1 156740391 5537832 461025..462584 1 NC_009767.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: rrs:RoseRS_0132 integral membrane protein MviN; integral membrane protein MviN 462584 5537832 Rcas_0370 Roseiflexus castenholzii DSM 13941 integral membrane protein MviN YP_001430520.1 461025 D 383372 CDS YP_001430521.1 156740392 5537833 462889..463896 1 NC_009767.1 PFAM: Bile acid:sodium symporter; KEGG: lic:LIC12384 sodium bile acid symporter family protein; bile acid:sodium symporter 463896 5537833 Rcas_0371 Roseiflexus castenholzii DSM 13941 bile acid:sodium symporter YP_001430521.1 462889 D 383372 CDS YP_001430522.1 156740393 5537834 464118..466865 1 NC_009767.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cph:Cpha266_0173 ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAD superfamily ATPase 466865 5537834 Rcas_0372 Roseiflexus castenholzii DSM 13941 HAD superfamily ATPase YP_001430522.1 464118 D 383372 CDS YP_001430523.1 156740394 5537835 complement(467007..468104) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0135 anti-sigma-factor antagonist; anti-sigma-factor antagonist 468104 5537835 Rcas_0373 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001430523.1 467007 R 383372 CDS YP_001430524.1 156740395 5537836 complement(468451..468876) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_4608 response regulator receiver protein; response regulator receiver protein 468876 5537836 Rcas_0374 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001430524.1 468451 R 383372 CDS YP_001430525.1 156740396 5537837 469072..470007 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4607 glycosyl transferase, family 2; glycosyl transferase family protein 470007 5537837 Rcas_0375 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430525.1 469072 D 383372 CDS YP_001430526.1 156740397 5537838 470004..470807 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4606 glycosyl transferase, family 2; glycosyl transferase family protein 470807 5537838 Rcas_0376 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430526.1 470004 D 383372 CDS YP_001430527.1 156740398 5537839 470833..471777 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4605 glycosyl transferase, family 2; glycosyl transferase family protein 471777 5537839 Rcas_0377 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430527.1 470833 D 383372 CDS YP_001430528.1 156740399 5537840 474586..476223 1 NC_009767.1 PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4604 protein kinase; TPR repeat-containing serine/threonine protein kinase 476223 5537840 Rcas_0378 Roseiflexus castenholzii DSM 13941 TPR repeat-containing serine/threonine protein kinase YP_001430528.1 474586 D 383372 CDS YP_001430529.1 156740400 5537841 476382..477629 1 NC_009767.1 PFAM: Beta-ketoacyl synthase; KEGG: rrs:RoseRS_4603 beta-ketoacyl synthase; beta-ketoacyl synthase 477629 5537841 Rcas_0379 Roseiflexus castenholzii DSM 13941 beta-ketoacyl synthase YP_001430529.1 476382 D 383372 CDS YP_001430530.1 156740401 5537842 477613..478317 1 NC_009767.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rrs:RoseRS_4602 ribonuclease III; ribonuclease III 478317 5537842 Rcas_0380 Roseiflexus castenholzii DSM 13941 ribonuclease III YP_001430530.1 477613 D 383372 CDS YP_001430531.1 156740402 5537843 478401..479246 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_4601 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 479246 5537843 Rcas_0381 Roseiflexus castenholzii DSM 13941 dTDP-4-dehydrorhamnose reductase YP_001430531.1 478401 D 383372 CDS YP_001430532.1 156740403 5537844 479376..480041 1 NC_009767.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_4600 PBS lyase heat domain protein repeat-containing protein; PBS lyase 480041 5537844 Rcas_0382 Roseiflexus castenholzii DSM 13941 PBS lyase YP_001430532.1 479376 D 383372 CDS YP_001430533.1 156740404 5537845 480347..482203 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_4599 extracellular solute-binding protein, family 5; extracellular solute-binding protein 482203 5537845 Rcas_0383 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001430533.1 480347 D 383372 CDS YP_001430534.1 156740405 5537846 482279..483238 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4598 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 483238 5537846 Rcas_0384 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport systems inner membrane component YP_001430534.1 482279 D 383372 CDS YP_001430535.1 156740406 5537847 483263..484294 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4597 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 484294 5537847 Rcas_0385 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430535.1 483263 D 383372 CDS YP_001430536.1 156740407 5537848 complement(484334..486691) 1 NC_009767.1 SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_4596 protein kinase; serine/threonine protein kinase 486691 5537848 Rcas_0386 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001430536.1 484334 R 383372 CDS YP_001430537.1 156740408 5537849 487058..487816 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_0145 NUDIX hydrolase; NUDIX hydrolase 487816 5537849 Rcas_0387 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001430537.1 487058 D 383372 CDS YP_001430538.1 156740409 5537850 487926..488642 1 NC_009767.1 KEGG: rrs:RoseRS_0144 amidase related to nicotinamidase-like protein; nicotinamidase-like amidase 488642 5537850 Rcas_0388 Roseiflexus castenholzii DSM 13941 nicotinamidase-like amidase YP_001430538.1 487926 D 383372 CDS YP_001430539.1 156740410 5537851 488849..491128 1 NC_009767.1 PFAM: UvrD/REP helicase; KEGG: rrs:RoseRS_0142 UvrD/REP helicase; UvrD/REP helicase 491128 5537851 Rcas_0389 Roseiflexus castenholzii DSM 13941 UvrD/REP helicase YP_001430539.1 488849 D 383372 CDS YP_001430540.1 156740411 5537852 complement(491134..492711) 1 NC_009767.1 KEGG: rrs:RoseRS_0141 transcriptional regulator, CdaR; transcriptional regulator CdaR 492711 5537852 Rcas_0390 Roseiflexus castenholzii DSM 13941 transcriptional regulator CdaR YP_001430540.1 491134 R 383372 CDS YP_001430541.1 156740412 5537853 complement(492779..494146) 1 NC_009767.1 KEGG: rrs:RoseRS_0140 glucose/sorbosone dehydrogenase-like protein; glucose/sorbosone dehydrogenase-like protein 494146 5537853 Rcas_0391 Roseiflexus castenholzii DSM 13941 glucose/sorbosone dehydrogenase-like protein YP_001430541.1 492779 R 383372 CDS YP_001430542.1 156740413 5537854 494483..495436 1 NC_009767.1 PFAM: Polyprenyl synthetase; KEGG: rrs:RoseRS_0139 polyprenyl synthetase; polyprenyl synthetase 495436 5537854 Rcas_0392 Roseiflexus castenholzii DSM 13941 polyprenyl synthetase YP_001430542.1 494483 D 383372 CDS YP_001430543.1 156740414 5537855 495459..497666 1 NC_009767.1 PFAM: alpha amylase catalytic region; KEGG: rrs:RoseRS_0138 alpha amylase, catalytic region; alpha amylase 497666 5537855 Rcas_0393 Roseiflexus castenholzii DSM 13941 alpha amylase YP_001430543.1 495459 D 383372 CDS YP_001430544.1 156740415 5537856 complement(498303..499589) 1 NC_009767.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0137 amine oxidase; amine oxidase 499589 5537856 Rcas_0394 Roseiflexus castenholzii DSM 13941 amine oxidase YP_001430544.1 498303 R 383372 CDS YP_001430545.1 156740416 5537857 499809..500567 1 NC_009767.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_0136 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 500567 5537857 Rcas_0395 Roseiflexus castenholzii DSM 13941 xylose isomerase domain-containing protein YP_001430545.1 499809 D 383372 CDS YP_001430546.1 156740417 5537858 500682..501353 1 NC_009767.1 KEGG: rrs:RoseRS_3546 hypothetical protein; hypothetical protein 501353 5537858 Rcas_0396 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430546.1 500682 D 383372 CDS YP_001430547.1 156740418 5537859 501587..504673 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: aeh:Mlg_1539 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 504673 5537859 Rcas_0397 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001430547.1 501587 D 383372 CDS YP_001430548.1 156740419 5537860 504663..505061 1 NC_009767.1 KEGG: rrs:RoseRS_2918 hypothetical protein; hypothetical protein 505061 5537860 Rcas_0398 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430548.1 504663 D 383372 CDS YP_001430549.1 156740420 5537861 505058..508372 1 NC_009767.1 PFAM: type III restriction protein res subunit; KEGG: mem:Memar_1479 type III restriction enzyme, res subunit; type III restriction protein res subunit 508372 5537861 Rcas_0399 Roseiflexus castenholzii DSM 13941 type III restriction protein res subunit YP_001430549.1 505058 D 383372 CDS YP_001430550.1 156740421 5537862 508895..509221 1 NC_009767.1 hypothetical protein 509221 5537862 Rcas_0400 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430550.1 508895 D 383372 CDS YP_001430551.1 156740422 5537863 509396..509869 1 NC_009767.1 KEGG: mxa:MXAN_4269 hypothetical protein; hypothetical protein 509869 5537863 Rcas_0401 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430551.1 509396 D 383372 CDS YP_001430552.1 156740423 5537864 509931..510737 1 NC_009767.1 KEGG: gur:Gura_2746 hypothetical protein; hypothetical protein 510737 5537864 Rcas_0402 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430552.1 509931 D 383372 CDS YP_001430553.1 156740424 5537865 510746..511357 1 NC_009767.1 hypothetical protein 511357 5537865 Rcas_0403 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430553.1 510746 D 383372 CDS YP_001430554.1 156740425 5537866 511389..512036 1 NC_009767.1 hypothetical protein 512036 5537866 Rcas_0404 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430554.1 511389 D 383372 CDS YP_001430555.1 156740426 5537867 complement(512030..513181) 1 NC_009767.1 PFAM: transposase IS4 family protein; KEGG: rrs:RoseRS_0444 transposase, IS4 family protein; transposase IS4 family protein 513181 5537867 Rcas_0405 Roseiflexus castenholzii DSM 13941 transposase IS4 family protein YP_001430555.1 512030 R 383372 CDS YP_001430556.1 156740427 5537868 514076..514546 1 NC_009767.1 hypothetical protein 514546 5537868 Rcas_0406 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430556.1 514076 D 383372 CDS YP_001430557.1 156740428 5537869 514608..516038 1 NC_009767.1 KEGG: ana:all3632 site-specific DNA-methyltransferase (cytosine-specific); cytosine-specific DNA-methyltransferase 516038 5537869 Rcas_0407 Roseiflexus castenholzii DSM 13941 cytosine-specific DNA-methyltransferase YP_001430557.1 514608 D 383372 CDS YP_001430558.1 156740429 5537870 516038..517000 1 NC_009767.1 KEGG: ana:all3631 type II site-specific deoxyribonuclease; type II site-specific deoxyribonuclease 517000 5537870 Rcas_0408 Roseiflexus castenholzii DSM 13941 type II site-specific deoxyribonuclease YP_001430558.1 516038 D 383372 CDS YP_001430559.1 156740430 5537871 517804..518055 1 NC_009767.1 KEGG: cph:Cpha266_0647 hypothetical protein; hypothetical protein 518055 5537871 Rcas_0409 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430559.1 517804 D 383372 CDS YP_001430560.1 156740431 5537873 complement(518610..519761) 1 NC_009767.1 PFAM: transposase IS4 family protein; KEGG: rrs:RoseRS_0444 transposase, IS4 family protein; transposase IS4 family protein 519761 5537873 Rcas_0411 Roseiflexus castenholzii DSM 13941 transposase IS4 family protein YP_001430560.1 518610 R 383372 CDS YP_001430561.1 156740432 5537874 520218..522149 1 NC_009767.1 KEGG: mem:Memar_1479 type III restriction enzyme, res subunit; hypothetical protein 522149 5537874 Rcas_0412 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430561.1 520218 D 383372 CDS YP_001430562.1 156740433 5537875 complement(522170..522943) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4611 alpha/beta hydrolase fold; alpha/beta hydrolase 522943 5537875 Rcas_0413 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001430562.1 522170 R 383372 CDS YP_001430563.1 156740434 5537876 complement(522970..524505) 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_4612 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 524505 5537876 Rcas_0414 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001430563.1 522970 R 383372 CDS YP_001430564.1 156740435 5537877 complement(525416..526963) 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_4613 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 526963 5537877 Rcas_0415 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001430564.1 525416 R 383372 CDS YP_001430565.1 156740436 5537878 complement(527581..529617) 1 NC_009767.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rrs:RoseRS_4614 transketolase; transketolase 529617 5537878 Rcas_0416 Roseiflexus castenholzii DSM 13941 transketolase YP_001430565.1 527581 R 383372 CDS YP_001430566.1 156740437 5537879 complement(529647..530300) 1 NC_009767.1 KEGG: rrs:RoseRS_4615 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase 530300 5537879 Rcas_0417 Roseiflexus castenholzii DSM 13941 transaldolase YP_001430566.1 529647 R 383372 CDS YP_001430567.1 156740438 5537880 530441..531658 1 NC_009767.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_4616 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 531658 5537880 Rcas_0418 Roseiflexus castenholzii DSM 13941 RpoD family RNA polymerase sigma factor YP_001430567.1 530441 D 383372 CDS YP_001430568.1 156740439 5537881 531724..532668 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4617 ABC transporter related; ABC transporter-like protein 532668 5537881 Rcas_0419 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430568.1 531724 D 383372 CDS YP_001430569.1 156740440 5537882 532661..533449 1 NC_009767.1 KEGG: rrs:RoseRS_4618 ABC-2 type transporter; ABC-2 type transporter 533449 5537882 Rcas_0420 Roseiflexus castenholzii DSM 13941 ABC-2 type transporter YP_001430569.1 532661 D 383372 CDS YP_001430570.1 156740441 5537883 533524..534261 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_4619 two component transcriptional regulator, winged helix family; two component transcriptional regulator 534261 5537883 Rcas_0421 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001430570.1 533524 D 383372 CDS YP_001430571.1 156740442 5537884 complement(534421..535755) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_4620 response regulator receiver protein; response regulator receiver protein 535755 5537884 Rcas_0422 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001430571.1 534421 R 383372 CDS YP_001430572.1 156740443 5537885 535938..538412 1 NC_009767.1 SMART: Integrin alpha beta-propellor repeat protein; KEGG: rrs:RoseRS_4621 integrin alpha beta-propellor repeat protein; alpha beta-propellor repeat-containing integrin 538412 5537885 Rcas_0423 Roseiflexus castenholzii DSM 13941 alpha beta-propellor repeat-containing integrin YP_001430572.1 535938 D 383372 CDS YP_001430573.1 156740444 5537886 complement(538405..539427) 1 NC_009767.1 KEGG: rrs:RoseRS_4622 AAA ATPase; ATPase AAA 539427 5537886 Rcas_0424 Roseiflexus castenholzii DSM 13941 ATPase AAA YP_001430573.1 538405 R 383372 CDS YP_001430574.1 156740445 5537887 complement(539702..540247) 1 NC_009767.1 PFAM: Appr-1-p processing domain protein; KEGG: rrs:RoseRS_4194 Appr-1-p processing domain protein; appr-1-p processing domain-containing protein 540247 5537887 Rcas_0425 Roseiflexus castenholzii DSM 13941 appr-1-p processing domain-containing protein YP_001430574.1 539702 R 383372 CDS YP_001430575.1 156740446 5537888 complement(540244..540555) 1 NC_009767.1 hypothetical protein 540555 5537888 Rcas_0426 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430575.1 540244 R 383372 CDS YP_001430576.1 156740447 5537890 complement(540710..541504) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_3838 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 541504 5537890 Rcas_0427 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001430576.1 540710 R 383372 CDS YP_001430577.1 156740448 5537891 complement(541977..542693) 1 NC_009767.1 KEGG: rrs:RoseRS_4195 hypothetical protein; hypothetical protein 542693 5537891 Rcas_0428 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430577.1 541977 R 383372 CDS YP_001430578.1 156740449 5537892 complement(542870..543397) 1 NC_009767.1 hypothetical protein 543397 5537892 Rcas_0429 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430578.1 542870 R 383372 CDS YP_001430579.1 156740450 5537893 543986..544633 1 NC_009767.1 KEGG: rrs:RoseRS_4198 hypothetical protein; hypothetical protein 544633 5537893 Rcas_0430 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430579.1 543986 D 383372 CDS YP_001430580.1 156740451 5537894 complement(545213..545821) 1 NC_009767.1 KEGG: rrs:RoseRS_4200 sensor protein; sensor protein 545821 5537894 Rcas_0431 Roseiflexus castenholzii DSM 13941 sensor protein YP_001430580.1 545213 R 383372 CDS YP_001430581.1 156740452 5537895 546294..546848 1 NC_009767.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 546848 dcd 5537895 dcd Roseiflexus castenholzii DSM 13941 deoxycytidine triphosphate deaminase YP_001430581.1 546294 D 383372 CDS YP_001430582.1 156740453 5537896 complement(546966..547388) 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_4202 NUDIX hydrolase; NUDIX hydrolase 547388 5537896 Rcas_0433 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001430582.1 546966 R 383372 CDS YP_001430583.1 156740454 5537897 complement(547418..548335) 1 NC_009767.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rrs:RoseRS_4203 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane region 548335 5537897 Rcas_0434 Roseiflexus castenholzii DSM 13941 cytochrome c biogenesis protein transmembrane region YP_001430583.1 547418 R 383372 CDS YP_001430584.1 156740455 5537898 complement(548348..549391) 1 NC_009767.1 PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_4204 FAD dependent oxidoreductase; FAD dependent oxidoreductase 549391 5537898 Rcas_0435 Roseiflexus castenholzii DSM 13941 FAD dependent oxidoreductase YP_001430584.1 548348 R 383372 CDS YP_001430585.1 156740456 5537899 549655..550269 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4205 protein of unknown function DUF820; hypothetical protein 550269 5537899 Rcas_0436 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430585.1 549655 D 383372 CDS YP_001430586.1 156740457 5537900 550282..551229 1 NC_009767.1 KEGG: rrs:RoseRS_4206 hypothetical protein; hypothetical protein 551229 5537900 Rcas_0437 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430586.1 550282 D 383372 CDS YP_001430587.1 156740458 5537901 complement(551934..552701) 1 NC_009767.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: rrs:RoseRS_4207 peptidase C26; peptidase C26 552701 5537901 Rcas_0438 Roseiflexus castenholzii DSM 13941 peptidase C26 YP_001430587.1 551934 R 383372 CDS YP_001430588.1 156740459 5537902 553088..554110 1 NC_009767.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rrs:RoseRS_4208 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 554110 5537902 Rcas_0439 Roseiflexus castenholzii DSM 13941 fumarylacetoacetate (FAA) hydrolase YP_001430588.1 553088 D 383372 CDS YP_001430589.1 156740460 5537903 554103..556220 1 NC_009767.1 KEGG: rrs:RoseRS_4209 hypothetical protein; hypothetical protein 556220 5537903 Rcas_0440 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430589.1 554103 D 383372 CDS YP_001430590.1 156740461 5537904 complement(556164..556598) 1 NC_009767.1 PFAM: protein of unknown function DUF1486; KEGG: rrs:RoseRS_4210 protein of unknown function DUF1486; hypothetical protein 556598 5537904 Rcas_0441 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430590.1 556164 R 383372 CDS YP_001430591.1 156740462 5537905 557333..559621 1 NC_009767.1 KEGG: rrs:RoseRS_4212 hypothetical protein; hypothetical protein 559621 5537905 Rcas_0442 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430591.1 557333 D 383372 CDS YP_001430592.1 156740463 5537906 complement(559625..560470) 1 NC_009767.1 KEGG: rrs:RoseRS_4213 membrane protein TerC possibly involved in tellurium resistance-like protein; tellurium resistance protein TerC 560470 5537906 Rcas_0443 Roseiflexus castenholzii DSM 13941 tellurium resistance protein TerC YP_001430592.1 559625 R 383372 CDS YP_001430593.1 156740464 5537907 560815..562107 1 NC_009767.1 PFAM: adenylosuccinate synthetase; KEGG: rrs:RoseRS_4214 adenylosuccinate synthase; adenylosuccinate synthetase 562107 5537907 Rcas_0444 Roseiflexus castenholzii DSM 13941 adenylosuccinate synthetase YP_001430593.1 560815 D 383372 CDS YP_001430594.1 156740465 5537908 complement(562112..562402) 1 NC_009767.1 KEGG: rrs:RoseRS_4215 hypothetical protein; hypothetical protein 562402 5537908 Rcas_0445 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430594.1 562112 R 383372 CDS YP_001430595.1 156740466 5537909 complement(562601..563551) 1 NC_009767.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rrs:RoseRS_4216 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 563551 5537909 Rcas_0446 Roseiflexus castenholzii DSM 13941 cobyrinic acid ac-diamide synthase YP_001430595.1 562601 R 383372 CDS YP_001430596.1 156740467 5537910 563778..564821 1 NC_009767.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_4217 GHMP kinase; GHMP kinase 564821 5537910 Rcas_0447 Roseiflexus castenholzii DSM 13941 GHMP kinase YP_001430596.1 563778 D 383372 CDS YP_001430597.1 156740468 5537911 564908..565531 1 NC_009767.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_4218 histidinol-phosphate phosphatase family protein; histidinol-phosphate phosphatase family protein 565531 5537911 Rcas_0448 Roseiflexus castenholzii DSM 13941 histidinol-phosphate phosphatase family protein YP_001430597.1 564908 D 383372 CDS YP_001430598.1 156740469 5537912 565550..567685 1 NC_009767.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4219 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 567685 5537912 Rcas_0449 Roseiflexus castenholzii DSM 13941 lipopolysaccharide biosynthesis protein YP_001430598.1 565550 D 383372 CDS YP_001430599.1 156740470 5537913 567682..568404 1 NC_009767.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_4220 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 568404 5537913 Rcas_0450 Roseiflexus castenholzii DSM 13941 hexapaptide repeat-containing transferase YP_001430599.1 567682 D 383372 CDS YP_001430600.1 156740471 5537914 569442..570686 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4222 glycosyl transferase, family 2; glycosyl transferase family protein 570686 5537914 Rcas_0451 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430600.1 569442 D 383372 CDS YP_001430601.1 156740472 5537915 570937..572958 1 NC_009767.1 KEGG: rrs:RoseRS_4223 hypothetical protein; hypothetical protein 572958 5537915 Rcas_0452 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430601.1 570937 D 383372 CDS YP_001430602.1 156740473 5537916 573769..576255 1 NC_009767.1 KEGG: rrs:RoseRS_4224 hypothetical protein; hypothetical protein 576255 5537916 Rcas_0453 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430602.1 573769 D 383372 CDS YP_001430603.1 156740474 5537917 576688..578418 1 NC_009767.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_4225 radical SAM domain protein; radical SAM domain-containing protein 578418 5537917 Rcas_0454 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001430603.1 576688 D 383372 CDS YP_001430604.1 156740475 5537918 579059..580228 1 NC_009767.1 KEGG: rrs:RoseRS_4226 membrane protein-like protein; hypothetical protein 580228 5537918 Rcas_0455 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430604.1 579059 D 383372 CDS YP_001430605.1 156740476 5537919 580486..581670 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4227 glycosyl transferase, group 1; group 1 glycosyl transferase 581670 5537919 Rcas_0456 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430605.1 580486 D 383372 CDS YP_001430606.1 156740477 5537920 581844..583310 1 NC_009767.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rrs:RoseRS_4228 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 583310 5537920 Rcas_0457 Roseiflexus castenholzii DSM 13941 polysaccharide biosynthesis protein YP_001430606.1 581844 D 383372 CDS YP_001430607.1 156740478 5537921 583327..584670 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4229 glycosyl transferase, group 1; group 1 glycosyl transferase 584670 5537921 Rcas_0458 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430607.1 583327 D 383372 CDS YP_001430608.1 156740479 5537922 584972..585883 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4230 glycosyl transferase, family 2; glycosyl transferase family protein 585883 5537922 Rcas_0459 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430608.1 584972 D 383372 CDS YP_001430609.1 156740480 5537923 586443..587984 1 NC_009767.1 KEGG: rrs:RoseRS_4231 hypothetical protein; hypothetical protein 587984 5537923 Rcas_0460 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430609.1 586443 D 383372 CDS YP_001430610.1 156740481 5537924 588475..589647 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4232 glycosyl transferase, group 1; group 1 glycosyl transferase 589647 5537924 Rcas_0461 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430610.1 588475 D 383372 CDS YP_001430611.1 156740482 5537925 589658..590884 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4233 glycosyl transferase, group 1; group 1 glycosyl transferase 590884 5537925 Rcas_0462 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430611.1 589658 D 383372 CDS YP_001430612.1 156740483 5537926 590886..591767 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4607 glycosyl transferase, family 2; glycosyl transferase family protein 591767 5537926 Rcas_0463 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430612.1 590886 D 383372 CDS YP_001430613.1 156740484 5537927 591780..592964 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2150 glycosyl transferase, group 1; group 1 glycosyl transferase 592964 5537927 Rcas_0464 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430613.1 591780 D 383372 CDS YP_001430614.1 156740485 5537928 592971..594431 1 NC_009767.1 PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4235 O-antigen polymerase; O-antigen polymerase 594431 5537928 Rcas_0465 Roseiflexus castenholzii DSM 13941 O-antigen polymerase YP_001430614.1 592971 D 383372 CDS YP_001430615.1 156740486 5537929 594428..596032 1 NC_009767.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: rrs:RoseRS_4236 glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase 596032 5537929 Rcas_0466 Roseiflexus castenholzii DSM 13941 BNR repeat-containing glycosyl hydrolase YP_001430615.1 594428 D 383372 CDS YP_001430616.1 156740487 5537930 598346..600010 1 NC_009767.1 KEGG: rrs:RoseRS_4239 hypothetical protein; hypothetical protein 600010 5537930 Rcas_0467 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430616.1 598346 D 383372 CDS YP_001430617.1 156740488 5537931 600017..601567 1 NC_009767.1 KEGG: rrs:RoseRS_4240 hypothetical protein; hypothetical protein 601567 5537931 Rcas_0468 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430617.1 600017 D 383372 CDS YP_001430618.1 156740489 5537932 601840..603414 1 NC_009767.1 KEGG: rrs:RoseRS_4241 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; glycosyltransferase 603414 5537932 Rcas_0469 Roseiflexus castenholzii DSM 13941 glycosyltransferase YP_001430618.1 601840 D 383372 CDS YP_001430619.1 156740490 5537933 606795..607679 1 NC_009767.1 KEGG: rrs:RoseRS_4242 hypothetical protein; hypothetical protein 607679 5537933 Rcas_0470 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430619.1 606795 D 383372 CDS YP_001430620.1 156740491 5537934 608494..611673 1 NC_009767.1 TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rrs:RoseRS_4244 conserved repeat domain; hypothetical protein 611673 5537934 Rcas_0471 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430620.1 608494 D 383372 CDS YP_001430621.1 156740492 5537935 complement(611753..612223) 1 NC_009767.1 PFAM: transcription activator effector binding; KEGG: rrs:RoseRS_4366 transcription activator, effector binding; transcription activator effector binding 612223 5537935 Rcas_0472 Roseiflexus castenholzii DSM 13941 transcription activator effector binding YP_001430621.1 611753 R 383372 CDS YP_001430622.1 156740493 5537937 613696..614790 1 NC_009767.1 PFAM: restriction endonuclease; SH3 type 3 domain protein; KEGG: rrs:RoseRS_4245 restriction endonuclease; restriction endonuclease 614790 5537937 Rcas_0474 Roseiflexus castenholzii DSM 13941 restriction endonuclease YP_001430622.1 613696 D 383372 CDS YP_001430623.1 156740494 5537938 614898..615725 1 NC_009767.1 hypothetical protein 615725 5537938 Rcas_0475 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430623.1 614898 D 383372 CDS YP_001430624.1 156740495 5537939 complement(615895..617133) 1 NC_009767.1 KEGG: rrs:RoseRS_4246 hypothetical protein; hypothetical protein 617133 5537939 Rcas_0476 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430624.1 615895 R 383372 CDS YP_001430625.1 156740496 5537940 617325..618542 1 NC_009767.1 PFAM: ROK family protein; regulatory protein MarR; regulatory protein Crp; KEGG: rrs:RoseRS_4247 ROK family protein; ROK family protein 618542 5537940 Rcas_0477 Roseiflexus castenholzii DSM 13941 ROK family protein YP_001430625.1 617325 D 383372 CDS YP_001430626.1 156740497 5537941 618610..619989 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_4248 extracellular solute-binding protein, family 1; extracellular solute-binding protein 619989 5537941 Rcas_0478 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001430626.1 618610 D 383372 CDS YP_001430627.1 156740498 5537942 620252..621196 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4249 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 621196 5537942 Rcas_0479 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430627.1 620252 D 383372 CDS YP_001430628.1 156740499 5537943 621211..622071 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4250 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 622071 5537943 Rcas_0480 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430628.1 621211 D 383372 CDS YP_001430629.1 156740500 5537944 622085..622822 1 NC_009767.1 KEGG: rrs:RoseRS_4251 hypothetical protein; hypothetical protein 622822 5537944 Rcas_0481 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430629.1 622085 D 383372 CDS YP_001430630.1 156740501 5537945 622828..623520 1 NC_009767.1 KEGG: rrs:RoseRS_4252 hypothetical protein; hypothetical protein 623520 5537945 Rcas_0482 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430630.1 622828 D 383372 CDS YP_001430631.1 156740502 5537946 623501..624283 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_4253 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 624283 5537946 Rcas_0483 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001430631.1 623501 D 383372 CDS YP_001430632.1 156740503 5537947 complement(624289..626235) 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3654 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 626235 5537947 Rcas_0484 Roseiflexus castenholzii DSM 13941 polysaccharide biosynthesis protein CapD YP_001430632.1 624289 R 383372 CDS YP_001430633.1 156740504 5537948 complement(626250..626927) 1 NC_009767.1 PFAM: protein of unknown function DUF218; KEGG: rrs:RoseRS_3653 protein of unknown function DUF218; hypothetical protein 626927 5537948 Rcas_0485 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430633.1 626250 R 383372 CDS YP_001430634.1 156740505 5537949 complement(626924..628135) 1 NC_009767.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_3652 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 628135 5537949 Rcas_0486 Roseiflexus castenholzii DSM 13941 DegT/DnrJ/EryC1/StrS aminotransferase YP_001430634.1 626924 R 383372 CDS YP_001430635.1 156740506 5537950 complement(628222..629310) 1 NC_009767.1 KEGG: rrs:RoseRS_3651 hypothetical protein; hypothetical protein 629310 5537950 Rcas_0487 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430635.1 628222 R 383372 CDS YP_001430636.1 156740507 5537951 complement(629322..630350) 1 NC_009767.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 630350 nadE 5537951 nadE Roseiflexus castenholzii DSM 13941 NAD synthetase YP_001430636.1 629322 R 383372 CDS YP_001430637.1 156740508 5537952 complement(630340..632340) 1 NC_009767.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: rrs:RoseRS_3649 asparagine synthase (glutamine-hydrolyzing); asparagine synthase 632340 5537952 Rcas_0489 Roseiflexus castenholzii DSM 13941 asparagine synthase YP_001430637.1 630340 R 383372 CDS YP_001430638.1 156740509 5537953 complement(632425..633963) 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_3648 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 633963 5537953 Rcas_0490 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001430638.1 632425 R 383372 CDS YP_001430639.1 156740510 5537954 complement(633950..634273) 1 NC_009767.1 KEGG: rrs:RoseRS_3647 hypothetical protein; hypothetical protein 634273 5537954 Rcas_0491 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430639.1 633950 R 383372 CDS YP_001430640.1 156740511 5537955 complement(634300..634965) 1 NC_009767.1 PFAM: LmbE family protein; KEGG: rrs:RoseRS_3646 LmbE family protein; LmbE family protein 634965 5537955 Rcas_0492 Roseiflexus castenholzii DSM 13941 LmbE family protein YP_001430640.1 634300 R 383372 CDS YP_001430641.1 156740512 5537956 complement(634985..635848) 1 NC_009767.1 KEGG: rrs:RoseRS_3645 hypothetical protein; hypothetical protein 635848 5537956 Rcas_0493 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430641.1 634985 R 383372 CDS YP_001430642.1 156740513 5537957 complement(635852..636511) 1 NC_009767.1 PFAM: sugar transferase; KEGG: rrs:RoseRS_3644 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase 636511 5537957 Rcas_0494 Roseiflexus castenholzii DSM 13941 UDP-phosphate galactose phosphotransferase YP_001430642.1 635852 R 383372 CDS YP_001430643.1 156740514 5537958 complement(636529..637692) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3643 glycosyl transferase, group 1; group 1 glycosyl transferase 637692 5537958 Rcas_0495 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430643.1 636529 R 383372 CDS YP_001430644.1 156740515 5537959 complement(637727..638956) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3642 glycosyl transferase, group 1; group 1 glycosyl transferase 638956 5537959 Rcas_0496 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430644.1 637727 R 383372 CDS YP_001430645.1 156740516 5537960 complement(638972..640489) 1 NC_009767.1 KEGG: rrs:RoseRS_3641 hypothetical protein; hypothetical protein 640489 5537960 Rcas_0497 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430645.1 638972 R 383372 CDS YP_001430646.1 156740517 5537961 complement(640486..641835) 1 NC_009767.1 PFAM: polysaccharide biosynthesis protein; KEGG: rrs:RoseRS_3640 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 641835 5537961 Rcas_0498 Roseiflexus castenholzii DSM 13941 polysaccharide biosynthesis protein YP_001430646.1 640486 R 383372 CDS YP_001430647.1 156740518 5537962 complement(641862..644516) 1 NC_009767.1 KEGG: rrs:RoseRS_3639 hypothetical protein; hypothetical protein 644516 5537962 Rcas_0499 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430647.1 641862 R 383372 CDS YP_001430648.1 156740519 5537963 complement(644544..646052) 1 NC_009767.1 PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_3638 secretion protein HlyD family protein; secretion protein HlyD family protein 646052 5537963 Rcas_0500 Roseiflexus castenholzii DSM 13941 secretion protein HlyD family protein YP_001430648.1 644544 R 383372 CDS YP_001430649.1 156740520 5537964 complement(646129..647595) 1 NC_009767.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_3637 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 647595 5537964 Rcas_0501 Roseiflexus castenholzii DSM 13941 lipopolysaccharide biosynthesis protein YP_001430649.1 646129 R 383372 CDS YP_001430650.1 156740521 5537965 648416..650203 1 NC_009767.1 KEGG: rrs:RoseRS_3636 hypothetical protein; hypothetical protein 650203 5537965 Rcas_0502 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430650.1 648416 D 383372 CDS YP_001430651.1 156740522 5537966 650200..651270 1 NC_009767.1 KEGG: rrs:RoseRS_3635 hypothetical protein; hypothetical protein 651270 5537966 Rcas_0503 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430651.1 650200 D 383372 CDS YP_001430652.1 156740523 5537967 complement(652886..653284) 1 NC_009767.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_3632 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 653284 5537967 Rcas_0504 Roseiflexus castenholzii DSM 13941 glyoxalase/bleomycin resistance protein/dioxygenase YP_001430652.1 652886 R 383372 CDS YP_001430653.1 156740524 5537968 653563..654660 1 NC_009767.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: rrs:RoseRS_3631 cytochrome-c peroxidase; cytochrome-c peroxidase 654660 5537968 Rcas_0505 Roseiflexus castenholzii DSM 13941 cytochrome-c peroxidase YP_001430653.1 653563 D 383372 CDS YP_001430654.1 156740525 5537969 654680..657505 1 NC_009767.1 KEGG: rrs:RoseRS_3630 hypothetical protein; hypothetical protein 657505 5537969 Rcas_0506 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430654.1 654680 D 383372 CDS YP_001430655.1 156740526 5537970 658348..658965 1 NC_009767.1 KEGG: rrs:RoseRS_3628 hypothetical protein; hypothetical protein 658965 5537970 Rcas_0507 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430655.1 658348 D 383372 CDS YP_001430656.1 156740527 5537971 complement(659120..661903) 1 NC_009767.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rrs:RoseRS_3627 glycosyl transferase, family 51; peptidoglycan glycosyltransferase 661903 5537971 Rcas_0508 Roseiflexus castenholzii DSM 13941 peptidoglycan glycosyltransferase YP_001430656.1 659120 R 383372 CDS YP_001430657.1 156740528 5537972 661981..663885 1 NC_009767.1 KEGG: rrs:RoseRS_3626 hypothetical protein; hypothetical protein 663885 5537972 Rcas_0509 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430657.1 661981 D 383372 CDS YP_001430658.1 156740529 5537973 663896..665881 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3625 protein kinase; serine/threonine protein kinase 665881 5537973 Rcas_0510 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001430658.1 663896 D 383372 CDS YP_001430659.1 156740530 5537974 666031..666345 1 NC_009767.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rrs:RoseRS_3624 methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 666345 5537974 Rcas_0511 Roseiflexus castenholzii DSM 13941 methylated-DNA--protein-cysteine methyltransferase YP_001430659.1 666031 D 383372 CDS YP_001430660.1 156740531 5537975 666495..667505 1 NC_009767.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_3623 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 667505 5537975 Rcas_0512 Roseiflexus castenholzii DSM 13941 LacI family transcriptional regulator YP_001430660.1 666495 D 383372 CDS YP_001430661.1 156740532 5537976 667640..668908 1 NC_009767.1 PFAM: Pyrrolo-quinoline quinone; KEGG: rrs:RoseRS_3622 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 668908 5537976 Rcas_0513 Roseiflexus castenholzii DSM 13941 Pyrrolo-quinoline quinone YP_001430661.1 667640 D 383372 CDS YP_001430662.1 156740533 5537977 668973..669980 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_3621 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 669980 5537977 Rcas_0514 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430662.1 668973 D 383372 CDS YP_001430663.1 156740534 5537978 670020..670928 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_3620 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 670928 5537978 Rcas_0515 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430663.1 670020 D 383372 CDS YP_001430664.1 156740535 5537979 671225..672691 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_3619 extracellular solute-binding protein, family 1; extracellular solute-binding protein 672691 5537979 Rcas_0516 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001430664.1 671225 D 383372 CDS YP_001430665.1 156740536 5537980 672823..675333 1 NC_009767.1 PFAM: Spermine synthase; KEGG: rrs:RoseRS_3618 spermine synthase; spermine synthase 675333 5537980 Rcas_0517 Roseiflexus castenholzii DSM 13941 spermine synthase YP_001430665.1 672823 D 383372 CDS YP_001430666.1 156740537 5537981 675367..676407 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_3617 oxidoreductase domain protein; oxidoreductase domain-containing protein 676407 5537981 Rcas_0518 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001430666.1 675367 D 383372 CDS YP_001430667.1 156740538 5537982 676418..678277 1 NC_009767.1 PFAM: glycoside hydrolase family 20; KEGG: rrs:RoseRS_3616 glycoside hydrolase, family 20; glycoside hydrolase family protein 678277 5537982 Rcas_0519 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001430667.1 676418 D 383372 CDS YP_001430668.1 156740539 5537983 678274..679524 1 NC_009767.1 PFAM: oxidoreductase domain protein; KEGG: rrs:RoseRS_3615 oxidoreductase domain protein; oxidoreductase domain-containing protein 679524 5537983 Rcas_0520 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001430668.1 678274 D 383372 CDS YP_001430669.1 156740540 5537984 679575..680936 1 NC_009767.1 PFAM: glycoside hydrolase family 1; KEGG: rrs:RoseRS_3614 beta-glucosidase; beta-glucosidase 680936 5537984 Rcas_0521 Roseiflexus castenholzii DSM 13941 beta-glucosidase YP_001430669.1 679575 D 383372 CDS YP_001430670.1 156740541 5537985 complement(681744..683438) 1 NC_009767.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: rrs:RoseRS_0219 formate--tetrahydrofolate ligase; formate--tetrahydrofolate ligase 683438 5537985 Rcas_0522 Roseiflexus castenholzii DSM 13941 formate--tetrahydrofolate ligase YP_001430670.1 681744 R 383372 CDS YP_001430671.1 156740542 5537986 complement(683553..684287) 1 NC_009767.1 KEGG: rrs:RoseRS_0218 hypothetical protein; hypothetical protein 684287 5537986 Rcas_0523 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430671.1 683553 R 383372 CDS YP_001430672.1 156740543 5537987 complement(684595..685563) 1 NC_009767.1 PFAM: esterase; KEGG: rrs:RoseRS_0667 esterase; esterase 685563 5537987 Rcas_0524 Roseiflexus castenholzii DSM 13941 esterase YP_001430672.1 684595 R 383372 CDS YP_001430673.1 156740544 5537988 complement(685593..688235) 1 NC_009767.1 PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0666 protein kinase; TPR repeat-containing serine/threonine protein kinase 688235 5537988 Rcas_0525 Roseiflexus castenholzii DSM 13941 TPR repeat-containing serine/threonine protein kinase YP_001430673.1 685593 R 383372 CDS YP_001430674.1 156740545 5537989 688479..689633 1 NC_009767.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_0665 hypothetical protein; major facilitator transporter 689633 5537989 Rcas_0526 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001430674.1 688479 D 383372 CDS YP_001430675.1 156740546 5537990 complement(689669..691735) 1 NC_009767.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_0664 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 691735 5537990 Rcas_0527 Roseiflexus castenholzii DSM 13941 peptidase S8/S53 subtilisin kexin sedolisin YP_001430675.1 689669 R 383372 CDS YP_001430676.1 156740547 5537991 691874..692809 1 NC_009767.1 PFAM: LmbE family protein; KEGG: rrs:RoseRS_0663 LmbE family protein; LmbE family protein 692809 5537991 Rcas_0528 Roseiflexus castenholzii DSM 13941 LmbE family protein YP_001430676.1 691874 D 383372 CDS YP_001430677.1 156740548 5537992 692995..693528 1 NC_009767.1 KEGG: rrs:RoseRS_0662 hypothetical protein; hypothetical protein 693528 5537992 Rcas_0529 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430677.1 692995 D 383372 CDS YP_001430678.1 156740549 5537993 693782..695659 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0661 ABC transporter related; ABC transporter-like protein 695659 5537993 Rcas_0530 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430678.1 693782 D 383372 CDS YP_001430679.1 156740550 5537994 complement(695660..698479) 1 NC_009767.1 KEGG: rrs:RoseRS_0660 uncharacterized membrane protein-like protein; hypothetical protein 698479 5537994 Rcas_0531 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430679.1 695660 R 383372 CDS YP_001430680.1 156740551 5537995 complement(699419..707458) 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0659 tetratricopeptide TPR_2 repeat protein; hypothetical protein 707458 5537995 Rcas_0532 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430680.1 699419 R 383372 CDS YP_001430681.1 156740552 5537996 complement(708954..710219) 1 NC_009767.1 KEGG: rrs:RoseRS_0658 hypothetical protein; hypothetical protein 710219 5537996 Rcas_0533 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430681.1 708954 R 383372 CDS YP_001430682.1 156740553 5537997 complement(711743..713056) 1 NC_009767.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rrs:RoseRS_0657 tetratricopeptide TPR_2 repeat protein; hypothetical protein 713056 5537997 Rcas_0534 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430682.1 711743 R 383372 CDS YP_001430683.1 156740554 5537998 714142..714810 1 NC_009767.1 KEGG: rsq:Rsph17025_3864 ABC transporter related; hypothetical protein 714810 5537998 Rcas_0535 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430683.1 714142 D 383372 CDS YP_001430684.1 156740555 5537999 715209..715478 1 NC_009767.1 hypothetical protein 715478 5537999 Rcas_0536 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430684.1 715209 D 383372 CDS YP_001430685.1 156740556 5538000 complement(715632..715979) 1 NC_009767.1 KEGG: rpa:RPA2819 hypothetical protein; hypothetical protein 715979 5538000 Rcas_0537 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430685.1 715632 R 383372 CDS YP_001430686.1 156740557 5538001 complement(715980..716225) 1 NC_009767.1 PFAM: protein of unknown function DUF433; KEGG: rrs:RoseRS_0896 protein of unknown function DUF433; hypothetical protein 716225 5538001 Rcas_0538 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430686.1 715980 R 383372 CDS YP_001430687.1 156740558 5538002 complement(717034..717246) 1 NC_009767.1 hypothetical protein 717246 5538002 Rcas_0539 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430687.1 717034 R 383372 CDS YP_001430688.1 156740559 5538003 complement(718772..719992) 1 NC_009767.1 KEGG: rrs:RoseRS_0628 coenzyme F390 synthetase-like protein; coenzyme F390 synthetase-like protein 719992 5538003 Rcas_0540 Roseiflexus castenholzii DSM 13941 coenzyme F390 synthetase-like protein YP_001430688.1 718772 R 383372 CDS YP_001430689.1 156740560 5538004 complement(720008..720808) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0627 ABC transporter related; ABC transporter-like protein 720808 5538004 Rcas_0541 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430689.1 720008 R 383372 CDS YP_001430690.1 156740561 5538005 complement(721034..722296) 1 NC_009767.1 KEGG: rrs:RoseRS_0626 ABC-type branched-chain amino acid transport systems periplasmic component-like protein; branched chain amino acid ABC transporter substrate-binding protein 722296 5538005 Rcas_0542 Roseiflexus castenholzii DSM 13941 branched chain amino acid ABC transporter substrate-binding protein YP_001430690.1 721034 R 383372 CDS YP_001430691.1 156740562 5538006 complement(722278..723336) 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0625 inner-membrane translocator; inner-membrane translocator 723336 5538006 Rcas_0543 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001430691.1 722278 R 383372 CDS YP_001430692.1 156740563 5538007 complement(723354..724235) 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0624 inner-membrane translocator; inner-membrane translocator 724235 5538007 Rcas_0544 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001430692.1 723354 R 383372 CDS YP_001430693.1 156740564 5538008 complement(724327..726276) 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_0623 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 726276 5538008 Rcas_0545 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001430693.1 724327 R 383372 CDS YP_001430694.1 156740565 5538009 complement(726279..727091) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0622 ABC transporter related; ABC transporter-like protein 727091 5538009 Rcas_0546 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430694.1 726279 R 383372 CDS YP_001430695.1 156740566 5538010 complement(727273..728598) 1 NC_009767.1 PFAM: peptidase M24; KEGG: rrs:RoseRS_0616 peptidase M24; peptidase M24 728598 5538010 Rcas_0547 Roseiflexus castenholzii DSM 13941 peptidase M24 YP_001430695.1 727273 R 383372 CDS YP_001430696.1 156740567 5538011 complement(728680..729360) 1 NC_009767.1 KEGG: rrs:RoseRS_0615 hypothetical protein; hypothetical protein 729360 5538011 Rcas_0548 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430696.1 728680 R 383372 CDS YP_001430697.1 156740568 5538012 complement(729492..730361) 1 NC_009767.1 KEGG: rrs:RoseRS_0614 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; apurinic endonuclease Apn1 730361 5538012 Rcas_0549 Roseiflexus castenholzii DSM 13941 apurinic endonuclease Apn1 YP_001430697.1 729492 R 383372 CDS YP_001430698.1 156740569 5538013 730693..731811 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0350 anti-sigma-factor antagonist; anti-sigma-factor antagonist 731811 5538013 Rcas_0550 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001430698.1 730693 D 383372 CDS YP_001430699.1 156740570 5538014 731981..733348 1 NC_009767.1 PFAM: phosphoribosylglycinamide synthetase; KEGG: rrs:RoseRS_0351 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 733348 5538014 Rcas_0551 Roseiflexus castenholzii DSM 13941 phosphoribosylamine--glycine ligase YP_001430699.1 731981 D 383372 CDS YP_001430700.1 156740571 5538015 733329..734648 1 NC_009767.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; methyltransferase small; (Uracil-5)-methyltransferase; KEGG: rrs:RoseRS_0352 RNA methyltransferase, TrmA family; RNA methyltransferase 734648 5538015 Rcas_0552 Roseiflexus castenholzii DSM 13941 RNA methyltransferase YP_001430700.1 733329 D 383372 CDS YP_001430701.1 156740572 5538016 734829..735470 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1413 protein of unknown function DUF820; hypothetical protein 735470 5538016 Rcas_0553 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430701.1 734829 D 383372 CDS YP_001430702.1 156740573 5538017 complement(735511..736560) 1 NC_009767.1 PFAM: alanine racemase domain protein; KEGG: rrs:RoseRS_3864 alanine racemase domain protein; alanine racemase 736560 5538017 Rcas_0554 Roseiflexus castenholzii DSM 13941 alanine racemase YP_001430702.1 735511 R 383372 CDS YP_001430703.1 156740574 5538018 737240..742033 1 NC_009767.1 PFAM: Laminin G sub domain 2; SMART: LamG domain protein jellyroll fold domain protein; KEGG: rrs:RoseRS_3863 laminin G, sub domain 2; laminin G 742033 5538018 Rcas_0555 Roseiflexus castenholzii DSM 13941 laminin G YP_001430703.1 737240 D 383372 CDS YP_001430704.1 156740575 5538019 complement(742405..743223) 1 NC_009767.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: rrs:RoseRS_3862 hemolysin A; hemolysin A 743223 5538019 Rcas_0556 Roseiflexus castenholzii DSM 13941 hemolysin A YP_001430704.1 742405 R 383372 CDS YP_001430705.1 156740576 5538020 complement(743223..743711) 1 NC_009767.1 KEGG: rrs:RoseRS_3861 hypothetical protein; hypothetical protein 743711 5538020 Rcas_0557 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430705.1 743223 R 383372 CDS YP_001430706.1 156740577 5538021 complement(743735..744925) 1 NC_009767.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_3860 formyl-CoA transferase; formyl-CoA transferase 744925 5538021 Rcas_0558 Roseiflexus castenholzii DSM 13941 formyl-CoA transferase YP_001430706.1 743735 R 383372 CDS YP_001430707.1 156740578 5538022 745047..746570 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_3859 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 746570 5538022 Rcas_0559 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001430707.1 745047 D 383372 CDS YP_001430708.1 156740579 5538023 746583..749513 1 NC_009767.1 PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3858 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 749513 5538023 Rcas_0560 Roseiflexus castenholzii DSM 13941 FAD linked oxidase domain-containing protein YP_001430708.1 746583 D 383372 CDS YP_001430709.1 156740580 5538024 749871..751715 1 NC_009767.1 KEGG: rrs:RoseRS_3857 amino acid permease-associated region; amino acid permease 751715 5538024 Rcas_0561 Roseiflexus castenholzii DSM 13941 amino acid permease YP_001430709.1 749871 D 383372 CDS YP_001430710.1 156740581 5538025 complement(751900..752532) 1 NC_009767.1 KEGG: rrs:RoseRS_4196 hypothetical protein; hypothetical protein 752532 5538025 Rcas_0562 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430710.1 751900 R 383372 CDS YP_001430711.1 156740582 5538027 complement(753334..753630) 1 NC_009767.1 KEGG: rrs:RoseRS_3856 hypothetical protein; hypothetical protein 753630 5538027 Rcas_0564 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430711.1 753334 R 383372 CDS YP_001430712.1 156740583 5538028 complement(753636..754709) 1 NC_009767.1 PFAM: band 7 protein; KEGG: rrs:RoseRS_3855 band 7 protein; hypothetical protein 754709 5538028 Rcas_0565 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430712.1 753636 R 383372 CDS YP_001430713.1 156740584 5538029 755361..756941 1 NC_009767.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_3854 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 756941 5538029 Rcas_0566 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase (quinone) YP_001430713.1 755361 D 383372 CDS YP_001430714.1 156740585 5538030 756980..759502 1 NC_009767.1 KEGG: rrs:RoseRS_3853 hypothetical protein; hypothetical protein 759502 5538030 Rcas_0567 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430714.1 756980 D 383372 CDS YP_001430715.1 156740586 5538031 760029..760400 1 NC_009767.1 KEGG: rrs:RoseRS_3852 hypothetical protein; hypothetical protein 760400 5538031 Rcas_0568 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430715.1 760029 D 383372 CDS YP_001430716.1 156740587 5538032 760634..762010 1 NC_009767.1 PFAM: transcriptional regulator domain protein; KEGG: rrs:RoseRS_3851 two component transcriptional regulator, winged helix family; winged helix family two component response transcriptional regulator 762010 5538032 Rcas_0569 Roseiflexus castenholzii DSM 13941 winged helix family two component response transcriptional regulator YP_001430716.1 760634 D 383372 CDS YP_001430717.1 156740588 5538033 762152..763159 1 NC_009767.1 PFAM: protein of unknown function DUF897; KEGG: rrs:RoseRS_1985 protein of unknown function DUF897; hypothetical protein 763159 5538033 Rcas_0570 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430717.1 762152 D 383372 CDS YP_001430718.1 156740589 5538034 763378..763680 1 NC_009767.1 KEGG: rrs:RoseRS_3849 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 763680 5538034 Rcas_0571 Roseiflexus castenholzii DSM 13941 nitrogen regulatory protein P-II YP_001430718.1 763378 D 383372 CDS YP_001430719.1 156740590 5538035 763756..766686 1 NC_009767.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: rrs:RoseRS_3848 excinuclease ABC, A subunit; excinuclease ABC subunit A 766686 5538035 Rcas_0572 Roseiflexus castenholzii DSM 13941 excinuclease ABC subunit A YP_001430719.1 763756 D 383372 CDS YP_001430720.1 156740591 5538036 complement(766690..767073) 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3847 HEPN domain protein; HEPN domain-containing protein 767073 5538036 Rcas_0573 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001430720.1 766690 R 383372 CDS YP_001430721.1 156740592 5538037 complement(767060..767422) 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3846 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 767422 5538037 Rcas_0574 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001430721.1 767060 R 383372 CDS YP_001430722.1 156740593 5538038 complement(767419..767814) 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3847 HEPN domain protein; HEPN domain-containing protein 767814 5538038 Rcas_0575 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001430722.1 767419 R 383372 CDS YP_001430723.1 156740594 5538039 complement(767801..768166) 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3846 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 768166 5538039 Rcas_0576 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001430723.1 767801 R 383372 CDS YP_001430724.1 156740595 5538040 768278..769840 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3845 protein kinase; serine/threonine protein kinase 769840 5538040 Rcas_0577 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001430724.1 768278 D 383372 CDS YP_001430725.1 156740596 5538041 769850..771181 1 NC_009767.1 PFAM: cell cycle protein; KEGG: rrs:RoseRS_3844 cell cycle protein; cell cycle protein 771181 5538041 Rcas_0578 Roseiflexus castenholzii DSM 13941 cell cycle protein YP_001430725.1 769850 D 383372 CDS YP_001430726.1 156740597 5538042 771521..773257 1 NC_009767.1 PFAM: penicillin-binding protein transpeptidase; KEGG: rrs:RoseRS_3840 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 773257 5538042 Rcas_0579 Roseiflexus castenholzii DSM 13941 peptidoglycan glycosyltransferase YP_001430726.1 771521 D 383372 CDS YP_001430727.1 156740598 5538043 773254..774213 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3839 tetratricopeptide TPR_2 repeat protein; hypothetical protein 774213 5538043 Rcas_0580 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430727.1 773254 D 383372 CDS YP_001430728.1 156740599 5538044 complement(774413..775699) 1 NC_009767.1 KEGG: rrs:RoseRS_3488 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 775699 5538044 Rcas_0581 Roseiflexus castenholzii DSM 13941 citrate synthase I YP_001430728.1 774413 R 383372 CDS YP_001430729.1 156740600 5538045 complement(776578..776823) 1 NC_009767.1 KEGG: rrs:RoseRS_4145 hypothetical protein; hypothetical protein 776823 5538045 Rcas_0582 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430729.1 776578 R 383372 CDS YP_001430730.1 156740601 5538046 777059..778198 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_4146 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 778198 5538046 Rcas_0583 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001430730.1 777059 D 383372 CDS YP_001430731.1 156740602 5538047 778258..778824 1 NC_009767.1 KEGG: rrs:RoseRS_4147 hypothetical protein; hypothetical protein 778824 5538047 Rcas_0584 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430731.1 778258 D 383372 CDS YP_001430732.1 156740603 5538048 complement(779287..779931) 1 NC_009767.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rrs:RoseRS_4153 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 779931 5538048 Rcas_0585 Roseiflexus castenholzii DSM 13941 phosphate uptake regulator PhoU YP_001430732.1 779287 R 383372 CDS YP_001430733.1 156740604 5538049 complement(779958..780776) 1 NC_009767.1 KEGG: rrs:RoseRS_4154 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 780776 5538049 Rcas_0586 Roseiflexus castenholzii DSM 13941 phosphate ABC transporter ATPase YP_001430733.1 779958 R 383372 CDS YP_001430734.1 156740605 5538050 complement(780776..782035) 1 NC_009767.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4155 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease 782035 5538050 Rcas_0587 Roseiflexus castenholzii DSM 13941 phosphate ABC transporter permease YP_001430734.1 780776 R 383372 CDS YP_001430735.1 156740606 5538051 complement(782032..782991) 1 NC_009767.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4156 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter permease 782991 5538051 Rcas_0588 Roseiflexus castenholzii DSM 13941 phosphate ABC transporter permease YP_001430735.1 782032 R 383372 CDS YP_001430736.1 156740607 5538052 complement(783215..785224) 1 NC_009767.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_4157 phosphate binding protein; phosphate binding protein 785224 5538052 Rcas_0589 Roseiflexus castenholzii DSM 13941 phosphate binding protein YP_001430736.1 783215 R 383372 CDS YP_001430737.1 156740608 5538053 785537..787186 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rrs:RoseRS_4158 anti-sigma-factor antagonist; anti-sigma-factor antagonist 787186 5538053 Rcas_0590 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001430737.1 785537 D 383372 CDS YP_001430738.1 156740609 5538054 787497..787835 1 NC_009767.1 KEGG: rrs:RoseRS_4159 hypothetical protein; hypothetical protein 787835 5538054 Rcas_0591 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430738.1 787497 D 383372 CDS YP_001430739.1 156740610 5538055 787965..789515 1 NC_009767.1 KEGG: rrs:RoseRS_4160 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; nitrogen specific signal transduction histidine kinase NtrB 789515 5538055 Rcas_0592 Roseiflexus castenholzii DSM 13941 nitrogen specific signal transduction histidine kinase NtrB YP_001430739.1 787965 D 383372 CDS YP_001430740.1 156740611 5538056 789484..790287 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_4161 two component transcriptional regulator, winged helix family; two component transcriptional regulator 790287 5538056 Rcas_0593 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001430740.1 789484 D 383372 CDS YP_001430741.1 156740612 5538057 790349..791290 1 NC_009767.1 PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_4162 pyruvate carboxyltransferase; pyruvate carboxyltransferase 791290 5538057 Rcas_0594 Roseiflexus castenholzii DSM 13941 pyruvate carboxyltransferase YP_001430741.1 790349 D 383372 CDS YP_001430742.1 156740613 5538058 791541..793025 1 NC_009767.1 KEGG: rrs:RoseRS_4163 hypothetical protein; hypothetical protein 793025 5538058 Rcas_0595 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430742.1 791541 D 383372 CDS YP_001430743.1 156740614 5538059 793317..795419 1 NC_009767.1 SMART: Pyrrolo-quinoline quinone; KEGG: rrs:RoseRS_4243 nucleic acid binding, OB-fold, tRNA/helicase-type; Pyrrolo-quinoline quinone 795419 5538059 Rcas_0596 Roseiflexus castenholzii DSM 13941 Pyrrolo-quinoline quinone YP_001430743.1 793317 D 383372 CDS YP_001430744.1 156740615 5538060 795416..796015 1 NC_009767.1 hypothetical protein 796015 5538060 Rcas_0597 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430744.1 795416 D 383372 CDS YP_001430745.1 156740616 5538061 complement(796230..797735) 1 NC_009767.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: rrs:RoseRS_3514 alpha-N-arabinofuranosidase; alpha-N-arabinofuranosidase 797735 5538061 Rcas_0598 Roseiflexus castenholzii DSM 13941 alpha-N-arabinofuranosidase YP_001430745.1 796230 R 383372 CDS YP_001430746.1 156740617 5538062 complement(798218..798895) 1 NC_009767.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3515 haloacid dehalogenase, type II; type II haloacid dehalogenase 798895 5538062 Rcas_0599 Roseiflexus castenholzii DSM 13941 type II haloacid dehalogenase YP_001430746.1 798218 R 383372 CDS YP_001430747.1 156740618 5538063 complement(799136..799747) 1 NC_009767.1 KEGG: rrs:RoseRS_3517 DNA polymerase, beta domain protein region; hypothetical protein 799747 5538063 Rcas_0600 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430747.1 799136 R 383372 CDS YP_001430748.1 156740619 5538064 complement(799871..802399) 1 NC_009767.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 802399 5538064 Rcas_0601 Roseiflexus castenholzii DSM 13941 ATP-dependent DNA helicase RecG YP_001430748.1 799871 R 383372 CDS YP_001430749.1 156740620 5538065 complement(802409..803254) 1 NC_009767.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: rrs:RoseRS_3519 DegV family protein; degV family protein 803254 5538065 Rcas_0602 Roseiflexus castenholzii DSM 13941 degV family protein YP_001430749.1 802409 R 383372 CDS YP_001430750.1 156740621 5538066 complement(803258..804106) 1 NC_009767.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: rrs:RoseRS_3520 DegV family protein; degV family protein 804106 5538066 Rcas_0603 Roseiflexus castenholzii DSM 13941 degV family protein YP_001430750.1 803258 R 383372 CDS YP_001430751.1 156740622 5538067 complement(804144..805694) 1 NC_009767.1 PFAM: Dak phosphatase; KEGG: rrs:RoseRS_3521 Dak phosphatase; Dak phosphatase 805694 5538067 Rcas_0604 Roseiflexus castenholzii DSM 13941 Dak phosphatase YP_001430751.1 804144 R 383372 CDS YP_001430752.1 156740623 5538068 complement(805694..806053) 1 NC_009767.1 PFAM: protein of unknown function DUF322; KEGG: chy:CHY_1997 hypothetical protein; hypothetical protein 806053 5538068 Rcas_0605 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430752.1 805694 R 383372 CDS YP_001430753.1 156740624 5538069 806155..806361 1 NC_009767.1 PFAM: ribosomal protein L28; KEGG: rrs:RoseRS_3523 ribosomal protein L28; 50S ribosomal protein L28 806361 5538069 Rcas_0606 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L28 YP_001430753.1 806155 D 383372 CDS YP_001430754.1 156740625 5538070 complement(806453..807268) 1 NC_009767.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: rrs:RoseRS_3524 Cof-like hydrolase; cof family hydrolase 807268 5538070 Rcas_0607 Roseiflexus castenholzii DSM 13941 cof family hydrolase YP_001430754.1 806453 R 383372 CDS YP_001430755.1 156740626 5538071 complement(807243..808280) 1 NC_009767.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_0946 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 808280 5538071 Rcas_0608 Roseiflexus castenholzii DSM 13941 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001430755.1 807243 R 383372 CDS YP_001430756.1 156740627 5538072 808343..808546 1 NC_009767.1 hypothetical protein 808546 5538072 Rcas_0609 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430756.1 808343 D 383372 CDS YP_001430757.1 156740628 5538073 808534..809511 1 NC_009767.1 KEGG: rrs:RoseRS_3489 hypothetical protein; hypothetical protein 809511 5538073 Rcas_0610 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430757.1 808534 D 383372 CDS YP_001430758.1 156740629 5538074 complement(809530..810966) 1 NC_009767.1 PFAM: aldehyde dehydrogenase; acyl-CoA reductase; KEGG: rrs:RoseRS_3490 aldehyde dehydrogenase; aldehyde dehydrogenase 810966 5538074 Rcas_0611 Roseiflexus castenholzii DSM 13941 aldehyde dehydrogenase YP_001430758.1 809530 R 383372 CDS YP_001430759.1 156740630 5538076 811647..812636 1 NC_009767.1 PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_3504 allergen V5/TPX-1 family protein; SCP-like extracellular 812636 5538076 Rcas_0613 Roseiflexus castenholzii DSM 13941 SCP-like extracellular YP_001430759.1 811647 D 383372 CDS YP_001430760.1 156740631 5538077 complement(812733..813941) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0728 protein of unknown function DUF820; hypothetical protein 813941 5538077 Rcas_0614 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430760.1 812733 R 383372 CDS YP_001430761.1 156740632 5538079 complement(815092..815781) 1 NC_009767.1 PFAM: integrase family protein; KEGG: rrs:RoseRS_0840 integron integrase; integrase family protein 815781 5538079 Rcas_0616 Roseiflexus castenholzii DSM 13941 integrase family protein YP_001430761.1 815092 R 383372 CDS YP_001430762.1 156740633 5538080 816260..816607 1 NC_009767.1 KEGG: syf:Synpcc7942_B2653 transcriptional modulator of MazE/toxin, MazF; transcriptional modulator of MazE/toxin MazF 816607 5538080 Rcas_0617 Roseiflexus castenholzii DSM 13941 transcriptional modulator of MazE/toxin MazF YP_001430762.1 816260 D 383372 CDS YP_001430763.1 156740634 5538081 816723..817325 1 NC_009767.1 KEGG: pth:PTH_0862 hypothetical protein; hypothetical protein 817325 5538081 Rcas_0618 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430763.1 816723 D 383372 CDS YP_001430764.1 156740635 5538083 818837..819718 1 NC_009767.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_3507 protein of unknown function DUF6, transmembrane; hypothetical protein 819718 5538083 Rcas_0620 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430764.1 818837 D 383372 CDS YP_001430765.1 156740636 5538084 complement(819773..820906) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3508 anti-sigma-factor antagonist; anti-sigma-factor antagonist 820906 5538084 Rcas_0621 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001430765.1 819773 R 383372 CDS YP_001430766.1 156740637 5538085 complement(820924..821904) 1 NC_009767.1 PFAM: Terpene synthase metal-binding domain protein; KEGG: rrs:RoseRS_3509 terpene synthase, metal-binding domain protein; terpene synthase metal-binding domain-containing protein 821904 5538085 Rcas_0622 Roseiflexus castenholzii DSM 13941 terpene synthase metal-binding domain-containing protein YP_001430766.1 820924 R 383372 CDS YP_001430767.1 156740638 5538086 complement(821932..822768) 1 NC_009767.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_3510 methyltransferase type 11; type 11 methyltransferase 822768 5538086 Rcas_0623 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001430767.1 821932 R 383372 CDS YP_001430768.1 156740639 5538087 complement(822993..824105) 1 NC_009767.1 PFAM: beta-lactamase; KEGG: rrs:RoseRS_3511 beta-lactamase; beta-lactamase 824105 5538087 Rcas_0624 Roseiflexus castenholzii DSM 13941 beta-lactamase YP_001430768.1 822993 R 383372 CDS YP_001430769.1 156740640 5538088 complement(824389..825735) 1 NC_009767.1 PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: rrs:RoseRS_0865 virulence factor MviN family protein; virulence factor MVIN family protein 825735 5538088 Rcas_0625 Roseiflexus castenholzii DSM 13941 virulence factor MVIN family protein YP_001430769.1 824389 R 383372 CDS YP_001430770.1 156740641 5538089 complement(825732..826733) 1 NC_009767.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: rrs:RoseRS_0866 uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 826733 5538089 Rcas_0626 Roseiflexus castenholzii DSM 13941 uroporphyrinogen decarboxylase YP_001430770.1 825732 R 383372 CDS YP_001430771.1 156740642 5538090 827454..828326 1 NC_009767.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rrs:RoseRS_0868 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 828326 5538090 Rcas_0627 Roseiflexus castenholzii DSM 13941 prolipoprotein diacylglyceryl transferase YP_001430771.1 827454 D 383372 CDS YP_001430772.1 156740643 5538092 complement(828865..829371) 1 NC_009767.1 KEGG: tko:TK0918 hypothetical protein; hypothetical protein 829371 5538092 Rcas_0629 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430772.1 828865 R 383372 CDS YP_001430773.1 156740644 5538093 complement(829371..829664) 1 NC_009767.1 hypothetical protein 829664 5538093 Rcas_0630 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430773.1 829371 R 383372 CDS YP_001430774.1 156740645 5538094 complement(830213..831889) 1 NC_009767.1 PFAM: ABC-1 domain protein; KEGG: rrs:RoseRS_0578 ABC-1 domain protein; hypothetical protein 831889 5538094 Rcas_0631 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430774.1 830213 R 383372 CDS YP_001430775.1 156740646 5538095 complement(832667..834139) 1 NC_009767.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 834139 5538095 Rcas_0632 Roseiflexus castenholzii DSM 13941 cobyric acid synthase YP_001430775.1 832667 R 383372 CDS YP_001430776.1 156740647 5538096 complement(834136..835200) 1 NC_009767.1 PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_0576 aminotransferase, class I and II; class I/II aminotransferase 835200 5538096 Rcas_0633 Roseiflexus castenholzii DSM 13941 class I/II aminotransferase YP_001430776.1 834136 R 383372 CDS YP_001430777.1 156740648 5538097 complement(835179..835733) 1 NC_009767.1 PFAM: cobalbumin biosynthesis protein; KEGG: rrs:RoseRS_0575 adenosylcobinamide-phosphate guanylyltransferase; adenosylcobinamide-phosphate guanylyltransferase 835733 5538097 Rcas_0634 Roseiflexus castenholzii DSM 13941 adenosylcobinamide-phosphate guanylyltransferase YP_001430777.1 835179 R 383372 CDS YP_001430778.1 156740649 5538098 complement(835730..837133) 1 NC_009767.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rrs:RoseRS_0574 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 837133 5538098 Rcas_0635 Roseiflexus castenholzii DSM 13941 cobyrinic acid a,c-diamide synthase YP_001430778.1 835730 R 383372 CDS YP_001430779.1 156740650 5538099 complement(837133..837948) 1 NC_009767.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rrs:RoseRS_0573 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 837948 5538099 Rcas_0636 Roseiflexus castenholzii DSM 13941 uroporphyrin-III C-methyltransferase YP_001430779.1 837133 R 383372 CDS YP_001430780.1 156740651 5538100 complement(837993..840506) 1 NC_009767.1 TIGRFAM: precorrin-3B C17-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: rrs:RoseRS_0572 precorrin-3B C17-methyltransferase; precorrin-3B C17-methyltransferase 840506 5538100 Rcas_0637 Roseiflexus castenholzii DSM 13941 precorrin-3B C17-methyltransferase YP_001430780.1 837993 R 383372 CDS YP_001430781.1 156740652 5538101 complement(840503..841318) 1 NC_009767.1 KEGG: rrs:RoseRS_0571 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C11-methyltransferase 841318 5538101 Rcas_0638 Roseiflexus castenholzii DSM 13941 precorrin-4 C11-methyltransferase YP_001430781.1 840503 R 383372 CDS YP_001430782.1 156740653 5538102 complement(841315..842043) 1 NC_009767.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rrs:RoseRS_0570 precorrin-2 C20-methyltransferase; precorrin-2 C20-methyltransferase 842043 5538102 Rcas_0639 Roseiflexus castenholzii DSM 13941 precorrin-2 C20-methyltransferase YP_001430782.1 841315 R 383372 CDS YP_001430783.1 156740654 5538103 complement(842036..843262) 1 NC_009767.1 KEGG: rrs:RoseRS_0569 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 843262 5538103 Rcas_0640 Roseiflexus castenholzii DSM 13941 precorrin-6y C5,15-methyltransferase subunit CbiE YP_001430783.1 842036 R 383372 CDS YP_001430784.1 156740655 5538104 complement(843259..844500) 1 NC_009767.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 844500 cbiD 5538104 cbiD Roseiflexus castenholzii DSM 13941 cobalt-precorrin-6A synthase YP_001430784.1 843259 R 383372 CDS YP_001430785.1 156740656 5538105 complement(844506..845174) 1 NC_009767.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: rrs:RoseRS_0567 precorrin-8X methylmutase CbiC/CobH; precorrin-8X methylmutase CbiC/CobH 845174 5538105 Rcas_0642 Roseiflexus castenholzii DSM 13941 precorrin-8X methylmutase CbiC/CobH YP_001430785.1 844506 R 383372 CDS YP_001430786.1 156740657 5538106 complement(845174..845692) 1 NC_009767.1 KEGG: rrs:RoseRS_0566 multimeric flavodoxin WrbA-like protein; multimeric flavodoxin WrbA-like protein 845692 5538106 Rcas_0643 Roseiflexus castenholzii DSM 13941 multimeric flavodoxin WrbA-like protein YP_001430786.1 845174 R 383372 CDS YP_001430787.1 156740658 5538107 complement(845840..847258) 1 NC_009767.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rrs:RoseRS_0565 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 847258 5538107 Rcas_0644 Roseiflexus castenholzii DSM 13941 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001430787.1 845840 R 383372 CDS YP_001430788.1 156740659 5538108 complement(847657..848592) 1 NC_009767.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: rrs:RoseRS_0564 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD 848592 5538108 Rcas_0645 Roseiflexus castenholzii DSM 13941 cobalamin biosynthesis protein CobD YP_001430788.1 847657 R 383372 CDS YP_001430789.1 156740660 5538109 complement(848593..849327) 1 NC_009767.1 KEGG: rrs:RoseRS_0563 cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase 849327 5538109 Rcas_0646 Roseiflexus castenholzii DSM 13941 cobalt ABC transporter ATPase YP_001430789.1 848593 R 383372 CDS YP_001430790.1 156740661 5538110 complement(849675..850736) 1 NC_009767.1 PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: rrs:RoseRS_0559 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 850736 5538110 Rcas_0647 Roseiflexus castenholzii DSM 13941 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001430790.1 849675 R 383372 CDS YP_001430791.1 156740662 5538111 complement(850963..855192) 1 NC_009767.1 KEGG: rrs:RoseRS_0558 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase; cobaltochelatase 855192 5538111 Rcas_0648 Roseiflexus castenholzii DSM 13941 cobaltochelatase YP_001430791.1 850963 R 383372 CDS YP_001430792.1 156740663 5538112 complement(855321..855989) 1 NC_009767.1 KEGG: rrs:RoseRS_0557 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 855989 5538112 Rcas_0649 Roseiflexus castenholzii DSM 13941 cob(I)alamin adenosyltransferase YP_001430792.1 855321 R 383372 CDS YP_001430793.1 156740664 5538113 complement(856636..857865) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0858 ABC transporter related; ABC transporter-like protein 857865 5538113 Rcas_0650 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430793.1 856636 R 383372 CDS YP_001430794.1 156740665 5538114 complement(858272..858643) 1 NC_009767.1 hypothetical protein 858643 5538114 Rcas_0651 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430794.1 858272 R 383372 CDS YP_001430795.1 156740666 5538115 complement(858656..859657) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3711 protein of unknown function DUF820; hypothetical protein 859657 5538115 Rcas_0652 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430795.1 858656 R 383372 CDS YP_001430796.1 156740667 5538116 860126..860977 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0537 metallophosphoesterase; metallophosphoesterase 860977 5538116 Rcas_0653 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001430796.1 860126 D 383372 CDS YP_001430797.1 156740668 5538117 860992..861972 1 NC_009767.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_0536 ATPase associated with various cellular activities, AAA_5; ATPase 861972 5538117 Rcas_0654 Roseiflexus castenholzii DSM 13941 ATPase YP_001430797.1 860992 D 383372 CDS YP_001430798.1 156740669 5538118 862054..863442 1 NC_009767.1 PFAM: VWA containing CoxE family protein; KEGG: rrs:RoseRS_0535 VWA containing CoxE family protein; von Willebrand factor A 863442 5538118 Rcas_0655 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001430798.1 862054 D 383372 CDS YP_001430799.1 156740670 5538119 complement(863445..865019) 1 NC_009767.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 865019 5538119 Rcas_0656 Roseiflexus castenholzii DSM 13941 phosphoglyceromutase YP_001430799.1 863445 R 383372 CDS YP_001430800.1 156740671 5538120 complement(865047..868121) 1 NC_009767.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: rrs:RoseRS_0823 preprotein translocase, SecA subunit; preprotein translocase subunit SecA 868121 5538120 Rcas_0657 Roseiflexus castenholzii DSM 13941 preprotein translocase subunit SecA YP_001430800.1 865047 R 383372 CDS YP_001430801.1 156740672 5538121 868398..870086 1 NC_009767.1 KEGG: rrs:RoseRS_0824 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; glycosyltransferase 870086 5538121 Rcas_0658 Roseiflexus castenholzii DSM 13941 glycosyltransferase YP_001430801.1 868398 D 383372 CDS YP_001430802.1 156740673 5538122 870070..870696 1 NC_009767.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rrs:RoseRS_0825 uncharacterized MobA-related protein-like protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 870696 5538122 Rcas_0659 Roseiflexus castenholzii DSM 13941 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_001430802.1 870070 D 383372 CDS YP_001430803.1 156740674 5538123 870706..871695 1 NC_009767.1 PFAM: molybdopterin binding domain; KEGG: rrs:RoseRS_0826 molybdopterin binding domain; molybdopterin binding domain-containing protein 871695 5538123 Rcas_0660 Roseiflexus castenholzii DSM 13941 molybdopterin binding domain-containing protein YP_001430803.1 870706 D 383372 CDS YP_001430804.1 156740675 5538124 complement(871684..872484) 1 NC_009767.1 KEGG: rrs:RoseRS_1031 hypothetical protein; hypothetical protein 872484 5538124 Rcas_0661 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430804.1 871684 R 383372 CDS YP_001430805.1 156740676 5538127 874206..874625 1 NC_009767.1 PFAM: protein of unknown function DUF59; KEGG: rrs:RoseRS_2837 protein of unknown function DUF59; hypothetical protein 874625 5538127 Rcas_0663 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430805.1 874206 D 383372 CDS YP_001430806.1 156740677 5538128 874653..875657 1 NC_009767.1 PFAM: amidohydrolase 2; KEGG: rrs:RoseRS_2838 amidohydrolase 2; amidohydrolase 875657 5538128 Rcas_0664 Roseiflexus castenholzii DSM 13941 amidohydrolase YP_001430806.1 874653 D 383372 CDS YP_001430807.1 156740678 5538129 875925..876221 1 NC_009767.1 PFAM: protein of unknown function DUF77; KEGG: rrs:RoseRS_0668 protein of unknown function DUF77; hypothetical protein 876221 5538129 Rcas_0665 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430807.1 875925 D 383372 CDS YP_001430808.1 156740679 5538130 876211..877029 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0669 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 877029 5538130 Rcas_0666 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001430808.1 876211 D 383372 CDS YP_001430809.1 156740680 5538131 877026..878015 1 NC_009767.1 PFAM: NMT1/THI5 like domain protein; KEGG: rrs:RoseRS_0670 substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5-like domain-containing protein 878015 5538131 Rcas_0667 Roseiflexus castenholzii DSM 13941 NMT1/THI5-like domain-containing protein YP_001430809.1 877026 D 383372 CDS YP_001430810.1 156740681 5538132 878034..878801 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0671 ABC transporter related; ABC transporter-like protein 878801 5538132 Rcas_0668 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430810.1 878034 D 383372 CDS YP_001430811.1 156740682 5538133 complement(878752..880518) 1 NC_009767.1 KEGG: tth:TTC0629 HD-hydrolase domain; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 880518 5538133 Rcas_0669 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001430811.1 878752 R 383372 CDS YP_001430812.1 156740683 5538134 complement(880515..880880) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: noc:Noc_1329 response regulator receiver; response regulator receiver protein 880880 5538134 Rcas_0670 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001430812.1 880515 R 383372 CDS YP_001430813.1 156740684 5538135 complement(880873..882480) 1 NC_009767.1 KEGG: noc:Noc_1328 KaiC; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase; circadian clock protein, KaiC 882480 5538135 Rcas_0671 Roseiflexus castenholzii DSM 13941 circadian clock protein, KaiC YP_001430813.1 880873 R 383372 CDS YP_001430814.1 156740685 5538136 complement(882772..883212) 1 NC_009767.1 KEGG: rrs:RoseRS_0160 hypothetical protein; hypothetical protein 883212 5538136 Rcas_0672 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430814.1 882772 R 383372 CDS YP_001430815.1 156740686 5538137 complement(883541..883819) 1 NC_009767.1 PFAM: histone family protein DNA-binding protein; KEGG: rrs:RoseRS_4008 histone family protein DNA-binding protein; histone family protein DNA-binding protein 883819 5538137 Rcas_0673 Roseiflexus castenholzii DSM 13941 histone family protein DNA-binding protein YP_001430815.1 883541 R 383372 CDS YP_001430816.1 156740687 5538138 884226..884588 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_0161 response regulator receiver protein; response regulator receiver protein 884588 5538138 Rcas_0674 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001430816.1 884226 D 383372 CDS YP_001430817.1 156740688 5538139 complement(884661..885062) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_0162 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 885062 5538139 Rcas_0675 Roseiflexus castenholzii DSM 13941 anti-sigma regulatory factor YP_001430817.1 884661 R 383372 CDS YP_001430818.1 156740689 5538140 complement(885049..885432) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0163 anti-sigma-factor antagonist; anti-sigma-factor antagonist 885432 5538140 Rcas_0676 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001430818.1 885049 R 383372 CDS YP_001430819.1 156740690 5538141 885713..886150 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_0164 NUDIX hydrolase; NUDIX hydrolase 886150 5538141 Rcas_0677 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001430819.1 885713 D 383372 CDS YP_001430820.1 156740691 5538143 complement(886321..887295) 1 NC_009767.1 PFAM: ROK family protein; KEGG: rrs:RoseRS_0099 ROK family protein; ROK family protein 887295 5538143 Rcas_0678 Roseiflexus castenholzii DSM 13941 ROK family protein YP_001430820.1 886321 R 383372 CDS YP_001430821.1 156740692 5538144 complement(887381..889258) 1 NC_009767.1 KEGG: rrs:RoseRS_0098 hypothetical protein; hypothetical protein 889258 5538144 Rcas_0679 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430821.1 887381 R 383372 CDS YP_001430822.1 156740693 5538145 889481..890443 1 NC_009767.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_0097 thioredoxin reductase; thioredoxin reductase 890443 5538145 Rcas_0680 Roseiflexus castenholzii DSM 13941 thioredoxin reductase YP_001430822.1 889481 D 383372 CDS YP_001430823.1 156740694 5538146 890454..891722 1 NC_009767.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: rrs:RoseRS_0096 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 891722 5538146 Rcas_0681 Roseiflexus castenholzii DSM 13941 molybdenum cofactor synthesis domain-containing protein YP_001430823.1 890454 D 383372 CDS YP_001430824.1 156740695 5538149 complement(893804..893983) 1 NC_009767.1 KEGG: rrs:RoseRS_0146 hypothetical protein; hypothetical protein 893983 5538149 Rcas_0684 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430824.1 893804 R 383372 CDS YP_001430825.1 156740696 5538150 894712..896211 1 NC_009767.1 PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_0147 radical SAM domain protein; radical SAM domain-containing protein 896211 5538150 Rcas_0685 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001430825.1 894712 D 383372 CDS YP_001430826.1 156740697 5538151 complement(896218..899313) 1 NC_009767.1 KEGG: rrs:RoseRS_0148 tetratricopeptide domain protein; hypothetical protein 899313 5538151 Rcas_0686 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430826.1 896218 R 383372 CDS YP_001430827.1 156740698 5538152 complement(899332..900846) 1 NC_009767.1 KEGG: rrs:RoseRS_0149 hypothetical protein; hypothetical protein 900846 5538152 Rcas_0687 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430827.1 899332 R 383372 CDS YP_001430828.1 156740699 5538153 complement(900839..902080) 1 NC_009767.1 KEGG: rrs:RoseRS_0150 hypothetical protein; hypothetical protein 902080 5538153 Rcas_0688 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430828.1 900839 R 383372 CDS YP_001430829.1 156740700 5538154 complement(902356..903741) 1 NC_009767.1 PFAM: transcriptional regulator domain protein; KEGG: rrs:RoseRS_0151 two component transcriptional regulator, winged helix family; winged helix family two component response transcriptional regulator 903741 5538154 Rcas_0689 Roseiflexus castenholzii DSM 13941 winged helix family two component response transcriptional regulator YP_001430829.1 902356 R 383372 CDS YP_001430830.1 156740701 5538155 complement(903745..906129) 1 NC_009767.1 KEGG: rrs:RoseRS_0152 hypothetical protein; hypothetical protein 906129 5538155 Rcas_0690 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430830.1 903745 R 383372 CDS YP_001430831.1 156740702 5538156 complement(906335..908437) 1 NC_009767.1 PFAM: protein of unknown function DUF87; KEGG: sth:STH2259 hypothetical protein; hypothetical protein 908437 5538156 Rcas_0691 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430831.1 906335 R 383372 CDS YP_001430832.1 156740703 5538157 complement(908449..909591) 1 NC_009767.1 KEGG: nwi:Nwi_1955 hypothetical protein; hypothetical protein 909591 5538157 Rcas_0692 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430832.1 908449 R 383372 CDS YP_001430833.1 156740704 5538158 complement(910056..910910) 1 NC_009767.1 KEGG: noc:Noc_0498 hypothetical protein; hypothetical protein 910910 5538158 Rcas_0693 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430833.1 910056 R 383372 CDS YP_001430834.1 156740705 5538159 910995..911687 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_1763 ABC transporter related protein; ABC transporter-like protein 911687 5538159 Rcas_0694 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430834.1 910995 D 383372 CDS YP_001430835.1 156740706 5538160 complement(911671..914577) 1 NC_009767.1 PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: rrs:RoseRS_0158 peptidase M16C associated domain protein; peptidase M16C associated domain-containing protein 914577 5538160 Rcas_0695 Roseiflexus castenholzii DSM 13941 peptidase M16C associated domain-containing protein YP_001430835.1 911671 R 383372 CDS YP_001430836.1 156740707 5538161 915103..915738 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0090 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 915738 5538161 Rcas_0696 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001430836.1 915103 D 383372 CDS YP_001430837.1 156740708 5538162 915946..917466 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_4343 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 917466 5538162 Rcas_0697 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001430837.1 915946 D 383372 CDS YP_001430838.1 156740709 5538163 917463..918461 1 NC_009767.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 918461 5538163 Rcas_0698 Roseiflexus castenholzii DSM 13941 2-dehydropantoate 2-reductase YP_001430838.1 917463 D 383372 CDS YP_001430839.1 156740710 5538164 complement(918439..921723) 1 NC_009767.1 PFAM: transcriptional activator domain; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4345 transcriptional activator domain; transcriptional activator domain-containing protein 921723 5538164 Rcas_0699 Roseiflexus castenholzii DSM 13941 transcriptional activator domain-containing protein YP_001430839.1 918439 R 383372 CDS YP_001430840.1 156740711 5538165 921812..922105 1 NC_009767.1 KEGG: rrs:RoseRS_4346 hypothetical protein; hypothetical protein 922105 5538165 Rcas_0700 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430840.1 921812 D 383372 CDS YP_001430841.1 156740712 5538166 complement(922383..923126) 1 NC_009767.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 923126 fabG 5538166 fabG Roseiflexus castenholzii DSM 13941 3-ketoacyl-ACP reductase YP_001430841.1 922383 R 383372 CDS YP_001430842.1 156740713 5538167 complement(923379..924569) 1 NC_009767.1 KEGG: rrs:RoseRS_4348 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 924569 5538167 Rcas_0702 Roseiflexus castenholzii DSM 13941 acetyl-CoA acetyltransferase YP_001430842.1 923379 R 383372 CDS YP_001430843.1 156740714 5538168 925010..925555 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4349 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 925555 5538168 Rcas_0703 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001430843.1 925010 D 383372 CDS YP_001430844.1 156740715 5538169 925606..926310 1 NC_009767.1 PFAM: 2-phosphosulfolactate phosphatase; KEGG: rrs:RoseRS_4350 2-phosphosulfolactate phosphatase; 2-phosphosulfolactate phosphatase 926310 5538169 Rcas_0704 Roseiflexus castenholzii DSM 13941 2-phosphosulfolactate phosphatase YP_001430844.1 925606 D 383372 CDS YP_001430845.1 156740716 5538170 926584..926973 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: pth:PTH_0137 hypothetical protein; HEPN domain-containing protein 926973 5538170 Rcas_0705 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001430845.1 926584 D 383372 CDS YP_001430846.1 156740717 5538171 926930..927289 1 NC_009767.1 KEGG: rrs:RoseRS_4420 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 927289 5538171 Rcas_0706 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001430846.1 926930 D 383372 CDS YP_001430847.1 156740718 5538172 927867..929996 1 NC_009767.1 KEGG: rrs:RoseRS_4351 hypothetical protein; hypothetical protein 929996 5538172 Rcas_0707 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430847.1 927867 D 383372 CDS YP_001430848.1 156740719 5538173 930631..931812 1 NC_009767.1 PFAM: protein of unknown function DUF711; KEGG: rrs:RoseRS_4352 protein of unknown function DUF711; hypothetical protein 931812 5538173 Rcas_0708 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430848.1 930631 D 383372 CDS YP_001430849.1 156740720 5538174 932092..933087 1 NC_009767.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_4355 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 933087 5538174 Rcas_0709 Roseiflexus castenholzii DSM 13941 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001430849.1 932092 D 383372 CDS YP_001430850.1 156740721 5538175 933091..934722 1 NC_009767.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 934722 pgi 5538175 pgi Roseiflexus castenholzii DSM 13941 glucose-6-phosphate isomerase YP_001430850.1 933091 D 383372 CDS YP_001430851.1 156740722 5538177 complement(935342..935575) 1 NC_009767.1 PFAM: protein of unknown function DUF433; KEGG: ana:asr2172 hypothetical protein; hypothetical protein 935575 5538177 Rcas_0712 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430851.1 935342 R 383372 CDS YP_001430852.1 156740723 5538178 935682..936245 1 NC_009767.1 PFAM: protein of unknown function UPF0079; KEGG: rrs:RoseRS_4357 protein of unknown function UPF0079; hypothetical protein 936245 5538178 Rcas_0713 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430852.1 935682 D 383372 CDS YP_001430853.1 156740724 5538179 936250..936900 1 NC_009767.1 PFAM: peptidase M22 glycoprotease; KEGG: rrs:RoseRS_4358 peptidase M22, glycoprotease; peptidase M22 glycoprotease 936900 5538179 Rcas_0714 Roseiflexus castenholzii DSM 13941 peptidase M22 glycoprotease YP_001430853.1 936250 D 383372 CDS YP_001430854.1 156740725 5538180 937061..938851 1 NC_009767.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: rrs:RoseRS_4359 aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase 938851 5538180 Rcas_0715 Roseiflexus castenholzii DSM 13941 aldehyde ferredoxin oxidoreductase YP_001430854.1 937061 D 383372 CDS YP_001430855.1 156740726 5538181 938943..939716 1 NC_009767.1 KEGG: rrs:RoseRS_4360 hypothetical protein; hypothetical protein 939716 5538181 Rcas_0716 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430855.1 938943 D 383372 CDS YP_001430856.1 156740727 5538182 939958..941874 1 NC_009767.1 KEGG: rrs:RoseRS_4361 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 941874 5538182 Rcas_0717 Roseiflexus castenholzii DSM 13941 ATP-dependent metalloprotease FtsH YP_001430856.1 939958 D 383372 CDS YP_001430857.1 156740728 5538183 941999..942766 1 NC_009767.1 PFAM: protein of unknown function DUF28; KEGG: rrs:RoseRS_4362 protein of unknown function DUF28; hypothetical protein 942766 5538183 Rcas_0718 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430857.1 941999 D 383372 CDS YP_001430858.1 156740729 5538184 942770..943276 1 NC_009767.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 943276 ruvC 5538184 ruvC Roseiflexus castenholzii DSM 13941 Holliday junction resolvase YP_001430858.1 942770 D 383372 CDS YP_001430859.1 156740730 5538185 943302..943979 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4381 methyltransferase type 11; type 11 methyltransferase 943979 5538185 Rcas_0720 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001430859.1 943302 D 383372 CDS YP_001430860.1 156740731 5538186 943986..944264 1 NC_009767.1 KEGG: rrs:RoseRS_4382 hypothetical protein; hypothetical protein 944264 5538186 Rcas_0721 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430860.1 943986 D 383372 CDS YP_001430861.1 156740732 5538187 complement(944319..945893) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4383 glycosyl transferase, group 1; group 1 glycosyl transferase 945893 5538187 Rcas_0722 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430861.1 944319 R 383372 CDS YP_001430862.1 156740733 5538188 946098..946832 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4384 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 946832 5538188 Rcas_0723 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001430862.1 946098 D 383372 CDS YP_001430863.1 156740734 5538189 946886..948151 1 NC_009767.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rrs:RoseRS_4385 Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase 948151 5538189 Rcas_0724 Roseiflexus castenholzii DSM 13941 Glu/Leu/Phe/Val dehydrogenase YP_001430863.1 946886 D 383372 CDS YP_001430864.1 156740735 5538190 complement(948194..949180) 1 NC_009767.1 KEGG: rrs:RoseRS_3208 ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein; multi-copper enzyme maturation ABC transporter permease-like protein 949180 5538190 Rcas_0725 Roseiflexus castenholzii DSM 13941 multi-copper enzyme maturation ABC transporter permease-like protein YP_001430864.1 948194 R 383372 CDS YP_001430865.1 156740736 5538191 complement(949164..950114) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3209 ABC transporter related; ABC transporter-like protein 950114 5538191 Rcas_0726 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001430865.1 949164 R 383372 CDS YP_001430866.1 156740737 5538192 complement(950128..951315) 1 NC_009767.1 KEGG: rrs:RoseRS_3210 protein of unknown function DUF11; hypothetical protein 951315 5538192 Rcas_0727 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430866.1 950128 R 383372 CDS YP_001430867.1 156740738 5538193 951804..952376 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_4386 response regulator receiver protein; response regulator receiver protein 952376 5538193 Rcas_0728 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001430867.1 951804 D 383372 CDS YP_001430868.1 156740739 5538194 complement(952381..952956) 1 NC_009767.1 PFAM: SNARE associated Golgi protein; KEGG: rrs:RoseRS_4387 hypothetical protein; hypothetical protein 952956 5538194 Rcas_0729 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430868.1 952381 R 383372 CDS YP_001430869.1 156740740 5538195 complement(952988..953764) 1 NC_009767.1 KEGG: rrs:RoseRS_4388 hypothetical protein; transmembrane anti-sigma factor 953764 5538195 Rcas_0730 Roseiflexus castenholzii DSM 13941 transmembrane anti-sigma factor YP_001430869.1 952988 R 383372 CDS YP_001430870.1 156740741 5538196 complement(953821..954426) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4389 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 954426 5538196 Rcas_0731 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001430870.1 953821 R 383372 CDS YP_001430871.1 156740742 5538197 complement(954522..956960) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_4390 signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 956960 5538197 Rcas_0732 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001430871.1 954522 R 383372 CDS YP_001430872.1 156740743 5538198 957451..958908 1 NC_009767.1 PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4391 O-antigen polymerase; O-antigen polymerase 958908 5538198 Rcas_0733 Roseiflexus castenholzii DSM 13941 O-antigen polymerase YP_001430872.1 957451 D 383372 CDS YP_001430873.1 156740744 5538199 complement(959306..960385) 1 NC_009767.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: sfu:Sfum_0699 threonine aldolase; threonine aldolase 960385 5538199 Rcas_0734 Roseiflexus castenholzii DSM 13941 threonine aldolase YP_001430873.1 959306 R 383372 CDS YP_001430874.1 156740745 5538200 961278..962144 1 NC_009767.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: rrs:RoseRS_4392 methylenetetrahydrofolate dehydrogenase (NADP(+)); methenyltetrahydrofolate cyclohydrolase 962144 5538200 Rcas_0735 Roseiflexus castenholzii DSM 13941 methenyltetrahydrofolate cyclohydrolase YP_001430874.1 961278 D 383372 CDS YP_001430875.1 156740746 5538202 962721..963785 1 NC_009767.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_4393 nucleotidyl transferase; nucleotidyl transferase 963785 5538202 Rcas_0736 Roseiflexus castenholzii DSM 13941 nucleotidyl transferase YP_001430875.1 962721 D 383372 CDS YP_001430876.1 156740747 5538203 963791..964729 1 NC_009767.1 KEGG: rrs:RoseRS_4394 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 964729 5538203 Rcas_0737 Roseiflexus castenholzii DSM 13941 ribose-phosphate pyrophosphokinase YP_001430876.1 963791 D 383372 CDS YP_001430877.1 156740748 5538204 964763..966070 1 NC_009767.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rrs:RoseRS_4395 protein of unknown function DUF21; CBS domain-containing protein 966070 5538204 Rcas_0738 Roseiflexus castenholzii DSM 13941 CBS domain-containing protein YP_001430877.1 964763 D 383372 CDS YP_001430878.1 156740749 5538205 966063..966476 1 NC_009767.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rrs:RoseRS_4396 cytidine deaminase; cytidine deaminase 966476 5538205 Rcas_0739 Roseiflexus castenholzii DSM 13941 cytidine deaminase YP_001430878.1 966063 D 383372 CDS YP_001430879.1 156740750 5538206 complement(966821..969319) 1 NC_009767.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rrs:RoseRS_4397 nucleotidyl transferase; nucleotidyl transferase 969319 5538206 Rcas_0740 Roseiflexus castenholzii DSM 13941 nucleotidyl transferase YP_001430879.1 966821 R 383372 CDS YP_001430880.1 156740751 5538207 complement(969580..969969) 1 NC_009767.1 KEGG: rrs:RoseRS_4398 hypothetical protein; hypothetical protein 969969 5538207 Rcas_0741 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430880.1 969580 R 383372 CDS YP_001430881.1 156740752 5538208 970254..971198 1 NC_009767.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_4399 protein of unknown function DUF6, transmembrane; hypothetical protein 971198 5538208 Rcas_0742 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430881.1 970254 D 383372 CDS YP_001430882.1 156740753 5538209 complement(971721..973763) 1 NC_009767.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_4400 diguanylate cyclase; diguanylate cyclase 973763 5538209 Rcas_0743 Roseiflexus castenholzii DSM 13941 diguanylate cyclase YP_001430882.1 971721 R 383372 CDS YP_001430883.1 156740754 5538210 973900..975126 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4401 major facilitator superfamily MFS_1; major facilitator transporter 975126 5538210 Rcas_0744 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001430883.1 973900 D 383372 CDS YP_001430884.1 156740755 5538211 975309..976703 1 NC_009767.1 KEGG: rrs:RoseRS_4402 hypothetical protein; hypothetical protein 976703 5538211 Rcas_0745 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430884.1 975309 D 383372 CDS YP_001430885.1 156740756 5538212 976856..977632 1 NC_009767.1 KEGG: rrs:RoseRS_4403 SH3, type 3 domain protein; SH3 type 3 domain-containing protein 977632 5538212 Rcas_0746 Roseiflexus castenholzii DSM 13941 SH3 type 3 domain-containing protein YP_001430885.1 976856 D 383372 CDS YP_001430886.1 156740757 5538213 complement(977798..978550) 1 NC_009767.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_4404 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 978550 5538213 Rcas_0747 Roseiflexus castenholzii DSM 13941 xylose isomerase domain-containing protein YP_001430886.1 977798 R 383372 CDS YP_001430887.1 156740758 5538214 complement(978620..979585) 1 NC_009767.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_4405 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; hypothetical protein 979585 5538214 Rcas_0748 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430887.1 978620 R 383372 CDS YP_001430888.1 156740759 5538215 979788..980921 1 NC_009767.1 KEGG: rrs:RoseRS_4406 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 980921 5538215 Rcas_0749 Roseiflexus castenholzii DSM 13941 DNA polymerase III subunit beta YP_001430888.1 979788 D 383372 CDS YP_001430889.1 156740760 5538216 980928..981272 1 NC_009767.1 KEGG: rrs:RoseRS_4407 hypothetical protein; hypothetical protein 981272 5538216 Rcas_0750 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430889.1 980928 D 383372 CDS YP_001430890.1 156740761 5538217 981311..982459 1 NC_009767.1 KEGG: rrs:RoseRS_4408 hypothetical protein; hypothetical protein 982459 5538217 Rcas_0751 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430890.1 981311 D 383372 CDS YP_001430891.1 156740762 5538218 984305..986209 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4409 tetratricopeptide TPR_2 repeat protein; hypothetical protein 986209 5538218 Rcas_0752 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430891.1 984305 D 383372 CDS YP_001430892.1 156740763 5538219 complement(986316..988295) 1 NC_009767.1 KEGG: rrs:RoseRS_4411 membrane protein-like protein; hypothetical protein 988295 5538219 Rcas_0753 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430892.1 986316 R 383372 CDS YP_001430893.1 156740764 5538220 complement(988285..989406) 1 NC_009767.1 KEGG: stp:Strop_1125 hypothetical protein; hypothetical protein 989406 5538220 Rcas_0754 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430893.1 988285 R 383372 CDS YP_001430894.1 156740765 5538221 complement(989393..990370) 1 NC_009767.1 KEGG: pth:PTH_0126 predicted integral membrane protein; hypothetical protein 990370 5538221 Rcas_0755 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430894.1 989393 R 383372 CDS YP_001430895.1 156740766 5538222 complement(990367..991071) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sco:SCO2317 methyltransferase; type 11 methyltransferase 991071 5538222 Rcas_0756 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001430895.1 990367 R 383372 CDS YP_001430896.1 156740767 5538223 complement(991074..992150) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rxy:Rxyl_3118 glycosyl transferase, family 2; glycosyl transferase family protein 992150 5538223 Rcas_0757 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430896.1 991074 R 383372 CDS YP_001430897.1 156740768 5538224 complement(992137..993252) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: mem:Memar_0202 glycosyl transferase, group 1; group 1 glycosyl transferase 993252 5538224 Rcas_0758 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430897.1 992137 R 383372 CDS YP_001430898.1 156740769 5538225 complement(993240..994319) 1 NC_009767.1 KEGG: sco:SCO4733 integral membrane protein; hypothetical protein 994319 5538225 Rcas_0759 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430898.1 993240 R 383372 CDS YP_001430899.1 156740770 5538226 complement(994316..995347) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4415 glycosyl transferase, family 2; glycosyl transferase family protein 995347 5538226 Rcas_0760 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430899.1 994316 R 383372 CDS YP_001430900.1 156740771 5538227 complement(995596..996834) 1 NC_009767.1 KEGG: rrs:RoseRS_4416 hypothetical protein; hypothetical protein 996834 5538227 Rcas_0761 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430900.1 995596 R 383372 CDS YP_001430901.1 156740772 5538228 complement(997620..998033) 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_4417 protein of unknown function DUF86; hypothetical protein 998033 5538228 Rcas_0762 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430901.1 997620 R 383372 CDS YP_001430902.1 156740773 5538229 complement(997990..998421) 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_4418 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 998421 5538229 Rcas_0763 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001430902.1 997990 R 383372 CDS YP_001430903.1 156740774 5538230 complement(998910..1000901) 1 NC_009767.1 KEGG: rrs:RoseRS_4419 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; asparagine synthase 1000901 5538230 Rcas_0764 Roseiflexus castenholzii DSM 13941 asparagine synthase YP_001430903.1 998910 R 383372 CDS YP_001430904.1 156740775 5538232 complement(1003600..1004871) 1 NC_009767.1 KEGG: rrs:RoseRS_4421 hypothetical protein; hypothetical protein 1004871 5538232 Rcas_0766 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430904.1 1003600 R 383372 CDS YP_001430905.1 156740776 5538233 complement(1004900..1005826) 1 NC_009767.1 KEGG: reh:H16_B0037 hypothetical protein; hypothetical protein 1005826 5538233 Rcas_0767 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430905.1 1004900 R 383372 CDS YP_001430906.1 156740777 5538234 complement(1005830..1006498) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mac:MA3170 hypothetical protein; type 12 methyltransferase 1006498 5538234 Rcas_0768 Roseiflexus castenholzii DSM 13941 type 12 methyltransferase YP_001430906.1 1005830 R 383372 CDS YP_001430907.1 156740778 5538235 complement(1006495..1007934) 1 NC_009767.1 KEGG: cno:NT01CX_1794 hypothetical protein; hypothetical protein 1007934 5538235 Rcas_0769 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430907.1 1006495 R 383372 CDS YP_001430908.1 156740779 5538236 1008089..1009447 1 NC_009767.1 KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 1009447 5538236 Rcas_0770 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430908.1 1008089 D 383372 CDS YP_001430909.1 156740780 5538238 complement(1010446..1011912) 1 NC_009767.1 PFAM: polysaccharide biosynthesis protein; KEGG: gfo:GFO_3263 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1011912 5538238 Rcas_0772 Roseiflexus castenholzii DSM 13941 polysaccharide biosynthesis protein YP_001430909.1 1010446 R 383372 CDS YP_001430910.1 156740781 5538240 complement(1012393..1013457) 1 NC_009767.1 PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: cac:CAC2187 sialic acid synthase; N-acylneuraminate-9-phosphate synthase 1013457 5538240 Rcas_0774 Roseiflexus castenholzii DSM 13941 N-acylneuraminate-9-phosphate synthase YP_001430910.1 1012393 R 383372 CDS YP_001430911.1 156740782 5538241 complement(1013454..1014962) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl_1522 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1014962 5538241 Rcas_0775 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001430911.1 1013454 R 383372 CDS YP_001430912.1 156740783 5538242 complement(1015362..1016000) 1 NC_009767.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: cth:Cthe_2230 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 1016000 5538242 Rcas_0776 Roseiflexus castenholzii DSM 13941 acylneuraminate cytidylyltransferase YP_001430912.1 1015362 R 383372 CDS YP_001430913.1 156740784 5538243 complement(1016687..1017889) 1 NC_009767.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pca:Pcar_1141 pyridoxal-phosphate-dependent aminotransferase enzyme; DegT/DnrJ/EryC1/StrS aminotransferase 1017889 5538243 Rcas_0777 Roseiflexus castenholzii DSM 13941 DegT/DnrJ/EryC1/StrS aminotransferase YP_001430913.1 1016687 R 383372 CDS YP_001430914.1 156740785 5538244 complement(1017886..1018863) 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mhu:Mhun_3090 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 1018863 5538244 Rcas_0778 Roseiflexus castenholzii DSM 13941 polysaccharide biosynthesis protein CapD YP_001430914.1 1017886 R 383372 CDS YP_001430915.1 156740786 5538245 complement(1019225..1019974) 1 NC_009767.1 KEGG: rrs:RoseRS_3711 protein of unknown function DUF820; hypothetical protein 1019974 5538245 Rcas_0779 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430915.1 1019225 R 383372 CDS YP_001430916.1 156740787 5538247 complement(1022096..1023373) 1 NC_009767.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_4428 glutamine--scyllo-inositol transaminase; glutamine--scyllo-inositol transaminase 1023373 5538247 Rcas_0781 Roseiflexus castenholzii DSM 13941 glutamine--scyllo-inositol transaminase YP_001430916.1 1022096 R 383372 CDS YP_001430917.1 156740788 5538248 complement(1023628..1024056) 1 NC_009767.1 PFAM: S23 ribosomal protein; KEGG: rrs:RoseRS_4428 glutamine--scyllo-inositol transaminase; 30S ribosomal protein S23 1024056 5538248 Rcas_0782 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S23 YP_001430917.1 1023628 R 383372 CDS YP_001430918.1 156740789 5538249 complement(1024352..1024990) 1 NC_009767.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_4429 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 1024990 5538249 Rcas_0783 Roseiflexus castenholzii DSM 13941 hexapaptide repeat-containing transferase YP_001430918.1 1024352 R 383372 CDS YP_001430919.1 156740790 5538250 complement(1025276..1026346) 1 NC_009767.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rrs:RoseRS_4430 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1026346 5538250 Rcas_0784 Roseiflexus castenholzii DSM 13941 UDP-N-acetylglucosamine 2-epimerase YP_001430919.1 1025276 R 383372 CDS YP_001430920.1 156740791 5538251 complement(1027246..1028283) 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_4431 oxidoreductase domain protein; oxidoreductase domain-containing protein 1028283 5538251 Rcas_0785 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001430920.1 1027246 R 383372 CDS YP_001430921.1 156740792 5538252 complement(1028330..1029250) 1 NC_009767.1 hypothetical protein 1029250 5538252 Rcas_0786 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430921.1 1028330 R 383372 CDS YP_001430922.1 156740793 5538253 complement(1029313..1030881) 1 NC_009767.1 KEGG: rrs:RoseRS_4433 hypothetical protein; hypothetical protein 1030881 5538253 Rcas_0787 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430922.1 1029313 R 383372 CDS YP_001430923.1 156740794 5538254 complement(1030954..1032348) 1 NC_009767.1 KEGG: rrs:RoseRS_4434 hypothetical protein; hypothetical protein 1032348 5538254 Rcas_0788 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430923.1 1030954 R 383372 CDS YP_001430924.1 156740795 5538255 complement(1032445..1033239) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4435 methyltransferase type 11; type 11 methyltransferase 1033239 5538255 Rcas_0789 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001430924.1 1032445 R 383372 CDS YP_001430925.1 156740796 5538256 complement(1033242..1034534) 1 NC_009767.1 KEGG: rrs:RoseRS_4436 glycosyltransferase-like protein; glycosyltransferase-like protein 1034534 5538256 Rcas_0790 Roseiflexus castenholzii DSM 13941 glycosyltransferase-like protein YP_001430925.1 1033242 R 383372 CDS YP_001430926.1 156740797 5538257 complement(1034531..1035559) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4437 glycosyl transferase, family 2; glycosyl transferase family protein 1035559 5538257 Rcas_0791 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430926.1 1034531 R 383372 CDS YP_001430927.1 156740798 5538258 complement(1035528..1036658) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: mac:MA2170 glycosyltransferase; glycosyl transferase family protein 1036658 5538258 Rcas_0792 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430927.1 1035528 R 383372 CDS YP_001430928.1 156740799 5538259 complement(1036655..1038574) 1 NC_009767.1 KEGG: rrs:RoseRS_4439 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; asparagine synthase 1038574 5538259 Rcas_0793 Roseiflexus castenholzii DSM 13941 asparagine synthase YP_001430928.1 1036655 R 383372 CDS YP_001430929.1 156740800 5538260 complement(1038578..1039636) 1 NC_009767.1 hypothetical protein 1039636 5538260 Rcas_0794 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430929.1 1038578 R 383372 CDS YP_001430930.1 156740801 5538261 complement(1039642..1040505) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4441 protein of unknown function DUF820; hypothetical protein 1040505 5538261 Rcas_0795 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430930.1 1039642 R 383372 CDS YP_001430931.1 156740802 5538262 complement(1040746..1041531) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4443 protein of unknown function DUF820; hypothetical protein 1041531 5538262 Rcas_0796 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430931.1 1040746 R 383372 CDS YP_001430932.1 156740803 5538263 complement(1041721..1042485) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4443 protein of unknown function DUF820; hypothetical protein 1042485 5538263 Rcas_0797 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430932.1 1041721 R 383372 CDS YP_001430933.1 156740804 5538264 complement(1042511..1043701) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4446 glycosyl transferase, group 1; group 1 glycosyl transferase 1043701 5538264 Rcas_0798 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430933.1 1042511 R 383372 CDS YP_001430934.1 156740805 5538265 complement(1043679..1044650) 1 NC_009767.1 hypothetical protein 1044650 5538265 Rcas_0799 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430934.1 1043679 R 383372 CDS YP_001430935.1 156740806 5538266 complement(1045034..1046134) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4447 glycosyl transferase, family 2; glycosyl transferase family protein 1046134 5538266 Rcas_0800 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001430935.1 1045034 R 383372 CDS YP_001430936.1 156740807 5538267 complement(1046376..1047542) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4448 glycosyl transferase, group 1; group 1 glycosyl transferase 1047542 5538267 Rcas_0801 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001430936.1 1046376 R 383372 CDS YP_001430937.1 156740808 5538268 1047975..1048622 1 NC_009767.1 PFAM: 4-vinyl reductase 4VR; KEGG: rrs:RoseRS_4449 4-vinyl reductase, 4VR; 4-vinyl reductase 4VR 1048622 5538268 Rcas_0802 Roseiflexus castenholzii DSM 13941 4-vinyl reductase 4VR YP_001430937.1 1047975 D 383372 CDS YP_001430938.1 156740809 5538269 1048926..1050326 1 NC_009767.1 KEGG: rrs:RoseRS_4450 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)-like protein; N-acetylglucosamine-1-phosphate uridyltransferase-like protein 1050326 5538269 Rcas_0803 Roseiflexus castenholzii DSM 13941 N-acetylglucosamine-1-phosphate uridyltransferase-like protein YP_001430938.1 1048926 D 383372 CDS YP_001430939.1 156740810 5538270 1050338..1051282 1 NC_009767.1 PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rrs:RoseRS_4451 response regulator receiver modulated diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 1051282 5538270 Rcas_0804 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated diguanylate cyclase YP_001430939.1 1050338 D 383372 CDS YP_001430940.1 156740811 5538271 1051336..1057821 1 NC_009767.1 KEGG: rrs:RoseRS_4452 multi-sensor signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 1057821 5538271 Rcas_0805 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001430940.1 1051336 D 383372 CDS YP_001430941.1 156740812 5538272 1057818..1058657 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4453 alpha/beta hydrolase fold; alpha/beta hydrolase 1058657 5538272 Rcas_0806 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001430941.1 1057818 D 383372 CDS YP_001430942.1 156740813 5538273 1058852..1059892 1 NC_009767.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_4454 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 1059892 5538273 Rcas_0807 Roseiflexus castenholzii DSM 13941 alcohol dehydrogenase YP_001430942.1 1058852 D 383372 CDS YP_001430943.1 156740814 5538274 1061057..1061605 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mta:Moth_1443 UbiE/COQ5 methyltransferase; type 11 methyltransferase 1061605 5538274 Rcas_0808 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001430943.1 1061057 D 383372 CDS YP_001430944.1 156740815 5538275 1061940..1064123 1 NC_009767.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4457 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1064123 5538275 Rcas_0809 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430944.1 1061940 D 383372 CDS YP_001430945.1 156740816 5538276 1064666..1065415 1 NC_009767.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4458 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1065415 5538276 Rcas_0810 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430945.1 1064666 D 383372 CDS YP_001430946.1 156740817 5538277 1065450..1066862 1 NC_009767.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: rrs:RoseRS_4459 iron-sulfur cluster binding protein; iron-sulfur cluster binding protein 1066862 5538277 Rcas_0811 Roseiflexus castenholzii DSM 13941 iron-sulfur cluster binding protein YP_001430946.1 1065450 D 383372 CDS YP_001430947.1 156740818 5538278 1066866..1069301 1 NC_009767.1 PFAM: glycoside hydrolase family 57; KEGG: rrs:RoseRS_4460 glycoside hydrolase, family 57; glycoside hydrolase family protein 1069301 5538278 Rcas_0812 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001430947.1 1066866 D 383372 CDS YP_001430948.1 156740819 5538279 1069540..1070145 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4461 protein of unknown function DUF820; hypothetical protein 1070145 5538279 Rcas_0813 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430948.1 1069540 D 383372 CDS YP_001430949.1 156740820 5538280 complement(1070673..1071476) 1 NC_009767.1 PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_4462 hypothetical protein; UbiA prenyltransferase 1071476 5538280 Rcas_0814 Roseiflexus castenholzii DSM 13941 UbiA prenyltransferase YP_001430949.1 1070673 R 383372 CDS YP_001430950.1 156740821 5538281 complement(1071492..1071968) 1 NC_009767.1 KEGG: rrs:RoseRS_4463 hypothetical protein; hypothetical protein 1071968 5538281 Rcas_0815 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430950.1 1071492 R 383372 CDS YP_001430951.1 156740822 5538282 complement(1071973..1072293) 1 NC_009767.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rrs:RoseRS_4464 hypothetical protein; cupin 1072293 5538282 Rcas_0816 Roseiflexus castenholzii DSM 13941 cupin YP_001430951.1 1071973 R 383372 CDS YP_001430952.1 156740823 5538283 complement(1072290..1073138) 1 NC_009767.1 PFAM: Methyltransferase type 11; KEGG: rrs:RoseRS_4465 methyltransferase type 11; type 11 methyltransferase 1073138 5538283 Rcas_0817 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001430952.1 1072290 R 383372 CDS YP_001430953.1 156740824 5538284 complement(1073323..1073565) 1 NC_009767.1 KEGG: rrs:RoseRS_4466 hypothetical protein; hypothetical protein 1073565 5538284 Rcas_0818 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430953.1 1073323 R 383372 CDS YP_001430954.1 156740825 5538285 complement(1073578..1073808) 1 NC_009767.1 KEGG: rrs:RoseRS_4467 hypothetical protein; hypothetical protein 1073808 5538285 Rcas_0819 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430954.1 1073578 R 383372 CDS YP_001430955.1 156740826 5538286 complement(1073819..1076167) 1 NC_009767.1 PFAM: iron permease FTR1; KEGG: rrs:RoseRS_4468 iron permease FTR1; iron permease FTR1 1076167 5538286 Rcas_0820 Roseiflexus castenholzii DSM 13941 iron permease FTR1 YP_001430955.1 1073819 R 383372 CDS YP_001430956.1 156740827 5538287 complement(1076181..1077263) 1 NC_009767.1 KEGG: rrs:RoseRS_4469 hypothetical protein; hypothetical protein 1077263 5538287 Rcas_0821 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430956.1 1076181 R 383372 CDS YP_001430957.1 156740828 5538288 1077504..1078754 1 NC_009767.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: rrs:RoseRS_4470 kynureninase; kynureninase 1078754 5538288 Rcas_0822 Roseiflexus castenholzii DSM 13941 kynureninase YP_001430957.1 1077504 D 383372 CDS YP_001430958.1 156740829 5538289 complement(1078835..1080055) 1 NC_009767.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rrs:RoseRS_4472 cystathionine gamma-synthase; cystathionine gamma-synthase 1080055 5538289 Rcas_0823 Roseiflexus castenholzii DSM 13941 cystathionine gamma-synthase YP_001430958.1 1078835 R 383372 CDS YP_001430959.1 156740830 5538290 1080377..1081684 1 NC_009767.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4473 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1081684 5538290 Rcas_0824 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430959.1 1080377 D 383372 CDS YP_001430960.1 156740831 5538291 complement(1083158..1084540) 1 NC_009767.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_4474 PHP C-terminal domain protein; phosphotransferase domain-containing protein 1084540 5538291 Rcas_0825 Roseiflexus castenholzii DSM 13941 phosphotransferase domain-containing protein YP_001430960.1 1083158 R 383372 CDS YP_001430961.1 156740832 5538292 1084820..1085623 1 NC_009767.1 PFAM: HpcH/HpaI aldolase; KEGG: rrs:RoseRS_4475 HpcH/HpaI aldolase; HpcH/HpaI aldolase 1085623 5538292 Rcas_0826 Roseiflexus castenholzii DSM 13941 HpcH/HpaI aldolase YP_001430961.1 1084820 D 383372 CDS YP_001430962.1 156740833 5538293 1085707..1086393 1 NC_009767.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rrs:RoseRS_4476 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1086393 5538293 Rcas_0827 Roseiflexus castenholzii DSM 13941 metal dependent phosphohydrolase YP_001430962.1 1085707 D 383372 CDS YP_001430963.1 156740834 5538294 complement(1086412..1087326) 1 NC_009767.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rrs:RoseRS_4477 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 1087326 5538294 Rcas_0828 Roseiflexus castenholzii DSM 13941 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001430963.1 1086412 R 383372 CDS YP_001430964.1 156740835 5538295 complement(1087455..1088735) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4478 major facilitator superfamily MFS_1; major facilitator transporter 1088735 5538295 Rcas_0829 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001430964.1 1087455 R 383372 CDS YP_001430965.1 156740836 5538296 complement(1089724..1090434) 1 NC_009767.1 KEGG: rrs:RoseRS_4479 hypothetical protein; hypothetical protein 1090434 5538296 Rcas_0830 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430965.1 1089724 R 383372 CDS YP_001430966.1 156740837 5538297 complement(1090658..1091092) 1 NC_009767.1 KEGG: rrs:RoseRS_4480 hypothetical protein; hypothetical protein 1091092 5538297 Rcas_0831 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430966.1 1090658 R 383372 CDS YP_001430967.1 156740838 5538298 complement(1091275..1092477) 1 NC_009767.1 KEGG: rrs:RoseRS_4481 hypothetical protein; hypothetical protein 1092477 5538298 Rcas_0832 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430967.1 1091275 R 383372 CDS YP_001430968.1 156740839 5538299 complement(1092597..1094765) 1 NC_009767.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_4482 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 1094765 5538299 Rcas_0833 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001430968.1 1092597 R 383372 CDS YP_001430969.1 156740840 5538300 complement(1094818..1095498) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_4483 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1095498 5538300 Rcas_0834 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001430969.1 1094818 R 383372 CDS YP_001430970.1 156740841 5538301 1095928..1096521 1 NC_009767.1 KEGG: rrs:RoseRS_4484 hypothetical protein; hypothetical protein 1096521 5538301 Rcas_0835 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430970.1 1095928 D 383372 CDS YP_001430971.1 156740842 5538302 1096508..1097116 1 NC_009767.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_4485 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1097116 5538302 Rcas_0836 Roseiflexus castenholzii DSM 13941 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_001430971.1 1096508 D 383372 CDS YP_001430972.1 156740843 5538303 1097129..1097986 1 NC_009767.1 KEGG: rrs:RoseRS_4486 hypothetical protein; hypothetical protein 1097986 5538303 Rcas_0837 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430972.1 1097129 D 383372 CDS YP_001430973.1 156740844 5538304 complement(1097988..1098428) 1 NC_009767.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rrs:RoseRS_0295 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 1098428 5538304 Rcas_0838 Roseiflexus castenholzii DSM 13941 BadM/Rrf2 family transcriptional regulator YP_001430973.1 1097988 R 383372 CDS YP_001430974.1 156740845 5538305 1098653..1099795 1 NC_009767.1 PFAM: HNH endonuclease; KEGG: rrs:RoseRS_0345 hypothetical protein; HNH endonuclease 1099795 5538305 Rcas_0839 Roseiflexus castenholzii DSM 13941 HNH endonuclease YP_001430974.1 1098653 D 383372 CDS YP_001430975.1 156740846 5538306 1099847..1100647 1 NC_009767.1 KEGG: rrs:RoseRS_0344 histidine triad (HIT) protein; histidine triad (HIT) protein 1100647 5538306 Rcas_0840 Roseiflexus castenholzii DSM 13941 histidine triad (HIT) protein YP_001430975.1 1099847 D 383372 CDS YP_001430976.1 156740847 5538307 complement(1101513..1102379) 1 NC_009767.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rrs:RoseRS_0342 molybdopterin dehydrogenase, FAD-binding; molybdopterin dehydrogenase FAD-binding 1102379 5538307 Rcas_0841 Roseiflexus castenholzii DSM 13941 molybdopterin dehydrogenase FAD-binding YP_001430976.1 1101513 R 383372 CDS YP_001430977.1 156740848 5538308 complement(1102445..1104826) 1 NC_009767.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rrs:RoseRS_0341 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 1104826 5538308 Rcas_0842 Roseiflexus castenholzii DSM 13941 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001430977.1 1102445 R 383372 CDS YP_001430978.1 156740849 5538309 complement(1104908..1105390) 1 NC_009767.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rrs:RoseRS_0340 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 1105390 5538309 Rcas_0843 Roseiflexus castenholzii DSM 13941 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001430978.1 1104908 R 383372 CDS YP_001430979.1 156740850 5538310 complement(1105440..1106189) 1 NC_009767.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rrs:RoseRS_0339 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 1106189 5538310 Rcas_0844 Roseiflexus castenholzii DSM 13941 carbon monoxide dehydrogenase subunit G YP_001430979.1 1105440 R 383372 CDS YP_001430980.1 156740851 5538311 complement(1106364..1107890) 1 NC_009767.1 KEGG: rrs:RoseRS_0338 response regulator receiver modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; response regulator receiver modulated metal dependent phosphohydrolase 1107890 5538311 Rcas_0845 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated metal dependent phosphohydrolase YP_001430980.1 1106364 R 383372 CDS YP_001430981.1 156740852 5538312 complement(1108052..1108471) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_0337 response regulator receiver protein; response regulator receiver protein 1108471 5538312 Rcas_0846 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001430981.1 1108052 R 383372 CDS YP_001430982.1 156740853 5538313 complement(1108977..1109834) 1 NC_009767.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_0336 PHP C-terminal domain protein; phosphotransferase domain-containing protein 1109834 5538313 Rcas_0847 Roseiflexus castenholzii DSM 13941 phosphotransferase domain-containing protein YP_001430982.1 1108977 R 383372 CDS YP_001430983.1 156740854 5538314 complement(1109831..1110964) 1 NC_009767.1 PFAM: Patatin; KEGG: rrs:RoseRS_0335 patatin; patatin 1110964 5538314 Rcas_0848 Roseiflexus castenholzii DSM 13941 patatin YP_001430983.1 1109831 R 383372 CDS YP_001430984.1 156740855 5538315 complement(1111042..1113195) 1 NC_009767.1 KEGG: rrs:RoseRS_0334 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; glycosyltransferase 1113195 5538315 Rcas_0849 Roseiflexus castenholzii DSM 13941 glycosyltransferase YP_001430984.1 1111042 R 383372 CDS YP_001430985.1 156740856 5538316 1113468..1113917 1 NC_009767.1 KEGG: rrs:RoseRS_0333 hypothetical protein; hypothetical protein 1113917 5538316 Rcas_0850 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430985.1 1113468 D 383372 CDS YP_001430986.1 156740857 5538318 complement(1115488..1115733) 1 NC_009767.1 hypothetical protein 1115733 5538318 Rcas_0852 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430986.1 1115488 R 383372 CDS YP_001430987.1 156740858 5538319 complement(1115948..1116613) 1 NC_009767.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_0332 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 1116613 5538319 Rcas_0853 Roseiflexus castenholzii DSM 13941 HAD family hydrolase YP_001430987.1 1115948 R 383372 CDS YP_001430988.1 156740859 5538320 1116851..1117651 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: chu:CHU_1562 SAM-dependent methyltransferase; type 11 methyltransferase 1117651 5538320 Rcas_0854 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001430988.1 1116851 D 383372 CDS YP_001430989.1 156740860 5538321 complement(1118031..1121633) 1 NC_009767.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: rrs:RoseRS_0331 chromosome segregation protein SMC; chromosome segregation protein SMC 1121633 5538321 Rcas_0855 Roseiflexus castenholzii DSM 13941 chromosome segregation protein SMC YP_001430989.1 1118031 R 383372 CDS YP_001430990.1 156740861 5538322 1121758..1123365 1 NC_009767.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1123365 5538322 Rcas_0856 Roseiflexus castenholzii DSM 13941 phosphodiesterase YP_001430990.1 1121758 D 383372 CDS YP_001430991.1 156740862 5538323 1123552..1123893 1 NC_009767.1 PFAM: Stage V sporulation protein S; KEGG: rrs:RoseRS_0329 stage V sporulation protein S; stage V sporulation protein S 1123893 5538323 Rcas_0857 Roseiflexus castenholzii DSM 13941 stage V sporulation protein S YP_001430991.1 1123552 D 383372 CDS YP_001430992.1 156740863 5538324 complement(1123980..1124915) 1 NC_009767.1 KEGG: rrs:RoseRS_0328 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 1124915 5538324 Rcas_0858 Roseiflexus castenholzii DSM 13941 2-dehydropantoate 2-reductase YP_001430992.1 1123980 R 383372 CDS YP_001430993.1 156740864 5538325 complement(1125042..1125845) 1 NC_009767.1 PFAM: protein of unknown function DUF82; KEGG: rrs:RoseRS_0327 protein of unknown function DUF82; hypothetical protein 1125845 5538325 Rcas_0859 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430993.1 1125042 R 383372 CDS YP_001430994.1 156740865 5538326 complement(1125842..1126582) 1 NC_009767.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rrs:RoseRS_0326 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 1126582 5538326 Rcas_0860 Roseiflexus castenholzii DSM 13941 prolipoprotein diacylglyceryl transferase YP_001430994.1 1125842 R 383372 CDS YP_001430995.1 156740866 5538327 complement(1126584..1127153) 1 NC_009767.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_0325 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1127153 5538327 Rcas_0861 Roseiflexus castenholzii DSM 13941 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_001430995.1 1126584 R 383372 CDS YP_001430996.1 156740867 5538328 1127250..1127948 1 NC_009767.1 KEGG: rrs:RoseRS_0324 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 1127948 5538328 Rcas_0862 Roseiflexus castenholzii DSM 13941 cytidylate kinase YP_001430996.1 1127250 D 383372 CDS YP_001430997.1 156740868 5538329 1127945..1129609 1 NC_009767.1 KEGG: rrs:RoseRS_0323 hypothetical protein; hypothetical protein 1129609 5538329 Rcas_0863 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430997.1 1127945 D 383372 CDS YP_001430998.1 156740869 5538330 1129630..1131519 1 NC_009767.1 KEGG: rrs:RoseRS_0322 hypothetical protein; hypothetical protein 1131519 5538330 Rcas_0864 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001430998.1 1129630 D 383372 CDS YP_001430999.1 156740870 5538331 1131530..1133560 1 NC_009767.1 KEGG: rrs:RoseRS_0321 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; tRNA(Ile)-lysidine synthetase; PFAM: phosphoribosyltransferase; PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; hypoxanthine phosphoribosyltransferase 1133560 5538331 Rcas_0865 Roseiflexus castenholzii DSM 13941 hypoxanthine phosphoribosyltransferase YP_001430999.1 1131530 D 383372 CDS YP_001431000.1 156740871 5538332 1133584..1134999 1 NC_009767.1 catalyzes the formation of phenol and pyruvate from tyrosine; tyrosine phenol-lyase 1134999 5538332 Rcas_0866 Roseiflexus castenholzii DSM 13941 tyrosine phenol-lyase YP_001431000.1 1133584 D 383372 CDS YP_001431001.1 156740872 5538333 1135682..1136674 1 NC_009767.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_4489 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 1136674 5538333 Rcas_0867 Roseiflexus castenholzii DSM 13941 periplasmic binding protein/LacI transcriptional regulator YP_001431001.1 1135682 D 383372 CDS YP_001431002.1 156740873 5538334 1136677..1138197 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rrs:RoseRS_4490 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1138197 5538334 Rcas_0868 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001431002.1 1136677 D 383372 CDS YP_001431003.1 156740874 5538335 complement(1138506..1139072) 1 NC_009767.1 KEGG: rrs:RoseRS_4504 hypothetical protein; hypothetical protein 1139072 5538335 Rcas_0869 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431003.1 1138506 R 383372 CDS YP_001431004.1 156740875 5538336 complement(1139717..1140277) 1 NC_009767.1 KEGG: rrs:RoseRS_4505 hypothetical protein; hypothetical protein 1140277 5538336 Rcas_0870 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431004.1 1139717 R 383372 CDS YP_001431005.1 156740876 5538337 1140771..1141523 1 NC_009767.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ppf:Pput_2660 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1141523 5538337 Rcas_0871 Roseiflexus castenholzii DSM 13941 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001431005.1 1140771 D 383372 CDS YP_001431006.1 156740877 5538338 1141723..1142037 1 NC_009767.1 KEGG: rrs:RoseRS_4507 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1142037 5538338 Rcas_0872 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001431006.1 1141723 D 383372 CDS YP_001431007.1 156740878 5538339 1142098..1143324 1 NC_009767.1 PFAM: protein of unknown function UPF0027; KEGG: rrs:RoseRS_4508 protein of unknown function UPF0027; hypothetical protein 1143324 5538339 Rcas_0873 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431007.1 1142098 D 383372 CDS YP_001431008.1 156740879 5538340 1143339..1143767 1 NC_009767.1 hypothetical protein 1143767 5538340 Rcas_0874 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431008.1 1143339 D 383372 CDS YP_001431009.1 156740880 5538341 1143785..1144630 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_4513 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 1144630 5538341 Rcas_0875 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001431009.1 1143785 D 383372 CDS YP_001431010.1 156740881 5538342 1144775..1145332 1 NC_009767.1 hypothetical protein 1145332 5538342 Rcas_0876 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431010.1 1144775 D 383372 CDS YP_001431011.1 156740882 5538343 1145341..1147497 1 NC_009767.1 KEGG: rrs:RoseRS_4515 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; DNA ligase 1147497 5538343 Rcas_0877 Roseiflexus castenholzii DSM 13941 DNA ligase YP_001431011.1 1145341 D 383372 CDS YP_001431012.1 156740883 5538344 1147512..1148465 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4516 alpha/beta hydrolase fold; alpha/beta hydrolase 1148465 5538344 Rcas_0878 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001431012.1 1147512 D 383372 CDS YP_001431013.1 156740884 5538345 complement(1149889..1150290) 1 NC_009767.1 KEGG: dvu:DVU2021 hypothetical protein; hypothetical protein 1150290 5538345 Rcas_0879 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431013.1 1149889 R 383372 CDS YP_001431014.1 156740885 5538346 complement(1151267..1152154) 1 NC_009767.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rrs:RoseRS_0236 transcriptional regulator, LysR family; LysR family transcriptional regulator 1152154 5538346 Rcas_0880 Roseiflexus castenholzii DSM 13941 LysR family transcriptional regulator YP_001431014.1 1151267 R 383372 CDS YP_001431015.1 156740886 5538347 1152602..1155358 1 NC_009767.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1155358 5538347 Rcas_0881 Roseiflexus castenholzii DSM 13941 aconitate hydratase YP_001431015.1 1152602 D 383372 CDS YP_001431016.1 156740887 5538348 1155503..1155973 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: gme:Gmet_3257 DNA polymerase, beta-like region; DNA polymerase subunit beta 1155973 5538348 Rcas_0882 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001431016.1 1155503 D 383372 CDS YP_001431017.1 156740888 5538349 1155994..1156287 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: gme:Gmet_3258 protein of unknown function DUF86; hypothetical protein 1156287 5538349 Rcas_0883 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431017.1 1155994 D 383372 CDS YP_001431018.1 156740889 5538350 complement(1156617..1157501) 1 NC_009767.1 KEGG: rrs:RoseRS_0233 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 1157501 5538350 Rcas_0884 Roseiflexus castenholzii DSM 13941 DNA adenine methylase YP_001431018.1 1156617 R 383372 CDS YP_001431019.1 156740890 5538351 1157827..1159149 1 NC_009767.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1159149 asnC 5538351 asnC Roseiflexus castenholzii DSM 13941 asparaginyl-tRNA synthetase YP_001431019.1 1157827 D 383372 CDS YP_001431020.1 156740891 5538352 1159159..1161687 1 NC_009767.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0231 GAF sensor hybrid histidine kinase; GAF sensor hybrid histidine kinase 1161687 5538352 Rcas_0886 Roseiflexus castenholzii DSM 13941 GAF sensor hybrid histidine kinase YP_001431020.1 1159159 D 383372 CDS YP_001431021.1 156740892 5538353 complement(1161693..1162121) 1 NC_009767.1 KEGG: rrs:RoseRS_0230 hypothetical protein; hypothetical protein 1162121 5538353 Rcas_0887 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431021.1 1161693 R 383372 CDS YP_001431022.1 156740893 5538354 complement(1162635..1163696) 1 NC_009767.1 PFAM: beta-lactamase; KEGG: rrs:RoseRS_0229 beta-lactamase; beta-lactamase 1163696 5538354 Rcas_0888 Roseiflexus castenholzii DSM 13941 beta-lactamase YP_001431022.1 1162635 R 383372 CDS YP_001431023.1 156740894 5538355 complement(1163700..1165382) 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_0228 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 1165382 5538355 Rcas_0889 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001431023.1 1163700 R 383372 CDS YP_001431024.1 156740895 5538356 complement(1165394..1165840) 1 NC_009767.1 KEGG: rrs:RoseRS_0227 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 1165840 5538356 Rcas_0890 Roseiflexus castenholzii DSM 13941 amino acid-binding ACT domain-containing protein YP_001431024.1 1165394 R 383372 CDS YP_001431025.1 156740896 5538357 complement(1165846..1166661) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_0226 alpha/beta hydrolase fold; alpha/beta hydrolase 1166661 5538357 Rcas_0891 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001431025.1 1165846 R 383372 CDS YP_001431026.1 156740897 5538358 complement(1166841..1167659) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: rrs:RoseRS_0225 alpha/beta hydrolase fold; alpha/beta hydrolase 1167659 5538358 Rcas_0892 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001431026.1 1166841 R 383372 CDS YP_001431027.1 156740898 5538359 complement(1167860..1169995) 1 NC_009767.1 PFAM: Rhodanese domain protein; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rrs:RoseRS_4186 sulphate transporter; sulfate transporter 1169995 5538359 Rcas_0893 Roseiflexus castenholzii DSM 13941 sulfate transporter YP_001431027.1 1167860 R 383372 CDS YP_001431028.1 156740899 5538361 complement(1171550..1172374) 1 NC_009767.1 KEGG: rrs:RoseRS_4183 hypothetical protein; hypothetical protein 1172374 5538361 Rcas_0895 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431028.1 1171550 R 383372 CDS YP_001431029.1 156740900 5538362 1172581..1173243 1 NC_009767.1 PFAM: PspA/IM30 family protein; KEGG: rrs:RoseRS_4182 phage shock protein A, PspA; phage shock protein PspA 1173243 5538362 Rcas_0896 Roseiflexus castenholzii DSM 13941 phage shock protein PspA YP_001431029.1 1172581 D 383372 CDS YP_001431030.1 156740901 5538363 complement(1173744..1175912) 1 NC_009767.1 KEGG: rrs:RoseRS_4181 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; alpha-glucan phosphorylase 1175912 5538363 Rcas_0897 Roseiflexus castenholzii DSM 13941 alpha-glucan phosphorylase YP_001431030.1 1173744 R 383372 CDS YP_001431031.1 156740902 5538364 complement(1176035..1176859) 1 NC_009767.1 KEGG: rrs:RoseRS_4180 hypothetical protein; hypothetical protein 1176859 5538364 Rcas_0898 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431031.1 1176035 R 383372 CDS YP_001431032.1 156740903 5538365 complement(1176925..1178487) 1 NC_009767.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4179 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1178487 5538365 Rcas_0899 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431032.1 1176925 R 383372 CDS YP_001431033.1 156740904 5538366 complement(1178986..1179477) 1 NC_009767.1 KEGG: rrs:RoseRS_4178 hypothetical protein; hypothetical protein 1179477 5538366 Rcas_0900 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431033.1 1178986 R 383372 CDS YP_001431034.1 156740905 5538367 complement(1179506..1181878) 1 NC_009767.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: csc:Csac_0586 glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 1181878 5538367 Rcas_0901 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family 3 YP_001431034.1 1179506 R 383372 CDS YP_001431035.1 156740906 5538368 complement(1181871..1182878) 1 NC_009767.1 KEGG: tpt:Tpet_0489 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1182878 5538368 Rcas_0902 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001431035.1 1181871 R 383372 CDS YP_001431036.1 156740907 5538369 complement(1182862..1183869) 1 NC_009767.1 KEGG: tma:TM0074 oligopeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1183869 5538369 Rcas_0903 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001431036.1 1182862 R 383372 CDS YP_001431037.1 156740908 5538370 complement(1183877..1184728) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0851 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1184728 5538370 Rcas_0904 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport systems inner membrane component YP_001431037.1 1183877 R 383372 CDS YP_001431038.1 156740909 5538371 complement(1184742..1185746) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0852 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1185746 5538371 Rcas_0905 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001431038.1 1184742 R 383372 CDS YP_001431039.1 156740910 5538372 complement(1185887..1187866) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: tma:TM0071 oligopeptide transport system substrate-binding protein; extracellular solute-binding protein 1187866 5538372 Rcas_0906 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001431039.1 1185887 R 383372 CDS YP_001431040.1 156740911 5538373 complement(1187902..1188927) 1 NC_009767.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cmi:CMM_0295 transcriptional regulator, LacI family; LacI family transcriptional regulator 1188927 5538373 Rcas_0907 Roseiflexus castenholzii DSM 13941 LacI family transcriptional regulator YP_001431040.1 1187902 R 383372 CDS YP_001431041.1 156740912 5538374 complement(1191072..1191926) 1 NC_009767.1 KEGG: rrs:RoseRS_4177 hypothetical protein; hypothetical protein 1191926 5538374 Rcas_0908 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431041.1 1191072 R 383372 CDS YP_001431042.1 156740913 5538375 1192148..1193587 1 NC_009767.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_4176 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1193587 5538375 Rcas_0909 Roseiflexus castenholzii DSM 13941 L-carnitine dehydratase/bile acid-inducible protein F YP_001431042.1 1192148 D 383372 CDS YP_001431043.1 156740914 5538376 1193604..1194821 1 NC_009767.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_4175 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1194821 5538376 Rcas_0910 Roseiflexus castenholzii DSM 13941 L-carnitine dehydratase/bile acid-inducible protein F YP_001431043.1 1193604 D 383372 CDS YP_001431044.1 156740915 5538377 1195114..1196340 1 NC_009767.1 KEGG: rrs:RoseRS_4174 acyl-CoA transferase/carnitine dehydratase-like protein; acyl-CoA transferase 1196340 5538377 Rcas_0911 Roseiflexus castenholzii DSM 13941 acyl-CoA transferase YP_001431044.1 1195114 D 383372 CDS YP_001431045.1 156740916 5538378 1196350..1197393 1 NC_009767.1 PFAM: HpcH/HpaI aldolase; KEGG: rrs:RoseRS_4173 HpcH/HpaI aldolase; HpcH/HpaI aldolase 1197393 5538378 Rcas_0912 Roseiflexus castenholzii DSM 13941 HpcH/HpaI aldolase YP_001431045.1 1196350 D 383372 CDS YP_001431046.1 156740917 5538379 1197409..1198467 1 NC_009767.1 PFAM: MaoC domain protein dehydratase; KEGG: rrs:RoseRS_4172 MaoC domain protein dehydratase; dehydratase 1198467 5538379 Rcas_0913 Roseiflexus castenholzii DSM 13941 dehydratase YP_001431046.1 1197409 D 383372 CDS YP_001431047.1 156740918 5538380 complement(1198488..1199297) 1 NC_009767.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_4259 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1199297 5538380 Rcas_0914 Roseiflexus castenholzii DSM 13941 enoyl-CoA hydratase/isomerase YP_001431047.1 1198488 R 383372 CDS YP_001431048.1 156740919 5538381 1199379..1199699 1 NC_009767.1 hypothetical protein 1199699 5538381 Rcas_0915 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431048.1 1199379 D 383372 CDS YP_001431049.1 156740920 5538382 1199934..1201121 1 NC_009767.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1201121 5538382 Rcas_0916 Roseiflexus castenholzii DSM 13941 dihydroorotase YP_001431049.1 1199934 D 383372 CDS YP_001431050.1 156740921 5538383 1201165..1202169 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3655 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1202169 5538383 Rcas_0917 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001431050.1 1201165 D 383372 CDS YP_001431051.1 156740922 5538384 complement(1202520..1203347) 1 NC_009767.1 PFAM: YceI family protein; KEGG: rrs:RoseRS_3479 YceI family protein; YceI family protein 1203347 5538384 Rcas_0918 Roseiflexus castenholzii DSM 13941 YceI family protein YP_001431051.1 1202520 R 383372 CDS YP_001431052.1 156740923 5538385 1203566..1206310 1 NC_009767.1 PFAM: glycoside hydrolase family 3 domain protein; PA14 domain protein; SMART: PA14-related domain protein; KEGG: rrs:RoseRS_3480 glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 1206310 5538385 Rcas_0919 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family 3 YP_001431052.1 1203566 D 383372 CDS YP_001431053.1 156740924 5538386 complement(1206753..1209368) 1 NC_009767.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_4294 ATPase AAA-2 domain protein; ATPase 1209368 5538386 Rcas_0920 Roseiflexus castenholzii DSM 13941 ATPase YP_001431053.1 1206753 R 383372 CDS YP_001431054.1 156740925 5538387 1209719..1212046 1 NC_009767.1 PFAM: alpha-L-rhamnosidase; KEGG: sus:Acid_3742 alpha-L-rhamnosidase; alpha-L-rhamnosidase 1212046 5538387 Rcas_0921 Roseiflexus castenholzii DSM 13941 alpha-L-rhamnosidase YP_001431054.1 1209719 D 383372 CDS YP_001431055.1 156740926 5538389 complement(1214353..1215777) 1 NC_009767.1 KEGG: rrs:RoseRS_4188 hypothetical protein; hypothetical protein 1215777 5538389 Rcas_0923 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431055.1 1214353 R 383372 CDS YP_001431056.1 156740927 5538390 complement(1215774..1216775) 1 NC_009767.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 1216775 glpX 5538390 glpX Roseiflexus castenholzii DSM 13941 fructose 1,6-bisphosphatase II YP_001431056.1 1215774 R 383372 CDS YP_001431057.1 156740928 5538391 1216974..1218428 1 NC_009767.1 PFAM: fumarate lyase; KEGG: rrs:RoseRS_3341 fumarate lyase; fumarate lyase 1218428 5538391 Rcas_0925 Roseiflexus castenholzii DSM 13941 fumarate lyase YP_001431057.1 1216974 D 383372 CDS YP_001431058.1 156740929 5538392 1220147..1221202 1 NC_009767.1 KEGG: rrs:RoseRS_3342 ATPase involved in chromosome partitioning-like protein; chromosome partitioning ATPase 1221202 5538392 Rcas_0926 Roseiflexus castenholzii DSM 13941 chromosome partitioning ATPase YP_001431058.1 1220147 D 383372 CDS YP_001431059.1 156740930 5538393 complement(1221497..1222978) 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4293 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1222978 5538393 Rcas_0927 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431059.1 1221497 R 383372 CDS YP_001431060.1 156740931 5538394 1223084..1224442 1 NC_009767.1 KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 1224442 5538394 Rcas_0928 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431060.1 1223084 D 383372 CDS YP_001431061.1 156740932 5538395 1226041..1234671 1 NC_009767.1 PFAM: Cna B domain protein; KEGG: rrs:RoseRS_4292 Cna B domain protein; Cna B domain-containing protein 1234671 5538395 Rcas_0929 Roseiflexus castenholzii DSM 13941 Cna B domain-containing protein YP_001431061.1 1226041 D 383372 CDS YP_001431062.1 156740933 5538396 1234810..1235592 1 NC_009767.1 KEGG: rrs:RoseRS_4291 hypothetical protein; hypothetical protein 1235592 5538396 Rcas_0930 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431062.1 1234810 D 383372 CDS YP_001431063.1 156740934 5538397 1235589..1237406 1 NC_009767.1 PFAM: TrkA-N domain protein; KEGG: rrs:RoseRS_4290 TrkA-N domain protein; TrkA domain-containing protein 1237406 5538397 Rcas_0931 Roseiflexus castenholzii DSM 13941 TrkA domain-containing protein YP_001431063.1 1235589 D 383372 CDS YP_001431064.1 156740935 5538398 complement(1237473..1238309) 1 NC_009767.1 PFAM: ATP-NAD/AcoX kinase; KEGG: rrs:RoseRS_4289 ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase 1238309 5538398 Rcas_0932 Roseiflexus castenholzii DSM 13941 ATP-NAD/AcoX kinase YP_001431064.1 1237473 R 383372 CDS YP_001431065.1 156740936 5538399 complement(1238306..1239244) 1 NC_009767.1 PFAM: metalloenzyme domain protein; KEGG: rrs:RoseRS_4288 metalloenzyme domain protein; metalloenzyme domain-containing protein 1239244 5538399 Rcas_0933 Roseiflexus castenholzii DSM 13941 metalloenzyme domain-containing protein YP_001431065.1 1238306 R 383372 CDS YP_001431066.1 156740937 5538400 1239605..1240771 1 NC_009767.1 PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_4287 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 1240771 5538400 Rcas_0934 Roseiflexus castenholzii DSM 13941 RNA-binding S1 domain-containing protein YP_001431066.1 1239605 D 383372 CDS YP_001431067.1 156740938 5538401 complement(1241138..1242037) 1 NC_009767.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 1242037 5538401 Rcas_0935 Roseiflexus castenholzii DSM 13941 6-phosphogluconate dehydrogenase YP_001431067.1 1241138 R 383372 CDS YP_001431068.1 156740939 5538402 1242287..1243495 1 NC_009767.1 PFAM: GHMP kinase domain protein; KEGG: rrs:RoseRS_4285 GHMP kinase, C terminal domain protein; GHMP kinase domain-containing protein 1243495 5538402 Rcas_0936 Roseiflexus castenholzii DSM 13941 GHMP kinase domain-containing protein YP_001431068.1 1242287 D 383372 CDS YP_001431069.1 156740940 5538403 1243854..1245008 1 NC_009767.1 PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_4282 peptidase C60, sortase A and B; peptidase C60 sortase A and B 1245008 5538403 Rcas_0937 Roseiflexus castenholzii DSM 13941 peptidase C60 sortase A and B YP_001431069.1 1243854 D 383372 CDS YP_001431070.1 156740941 5538404 complement(1245016..1245540) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4281 protein of unknown function DUF820; hypothetical protein 1245540 5538404 Rcas_0938 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431070.1 1245016 R 383372 CDS YP_001431071.1 156740942 5538405 complement(1245558..1246574) 1 NC_009767.1 PFAM: beta-lactamase; KEGG: rrs:RoseRS_4280 beta-lactamase; beta-lactamase 1246574 5538405 Rcas_0939 Roseiflexus castenholzii DSM 13941 beta-lactamase YP_001431071.1 1245558 R 383372 CDS YP_001431072.1 156740943 5538406 1246637..1247032 1 NC_009767.1 hypothetical protein 1247032 5538406 Rcas_0940 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431072.1 1246637 D 383372 CDS YP_001431073.1 156740944 5538407 1247195..1248058 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4278 methyltransferase type 11; type 11 methyltransferase 1248058 5538407 Rcas_0941 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001431073.1 1247195 D 383372 CDS YP_001431074.1 156740945 5538408 1248121..1248492 1 NC_009767.1 KEGG: rrs:RoseRS_4277 Ig domain protein, group 1 domain protein; hypothetical protein 1248492 5538408 Rcas_0942 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431074.1 1248121 D 383372 CDS YP_001431075.1 156740946 5538409 complement(1248772..1249764) 1 NC_009767.1 PFAM: protein of unknown function DUF368; KEGG: rrs:RoseRS_3873 protein of unknown function DUF368; hypothetical protein 1249764 5538409 Rcas_0943 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431075.1 1248772 R 383372 CDS YP_001431076.1 156740947 5538410 complement(1250240..1251592) 1 NC_009767.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_3701 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 1251592 5538410 Rcas_0944 Roseiflexus castenholzii DSM 13941 DEAD/DEAH box helicase YP_001431076.1 1250240 R 383372 CDS YP_001431077.1 156740948 5538411 1251958..1252731 1 NC_009767.1 KEGG: rrs:RoseRS_3700 histidinol-phosphate phosphatase, TIGRFAM: histidinol-phosphate phosphatase, PFAM: inositol monophosphatase; histidinol-phosphate phosphatase 1252731 5538411 Rcas_0945 Roseiflexus castenholzii DSM 13941 histidinol-phosphate phosphatase YP_001431077.1 1251958 D 383372 CDS YP_001431078.1 156740949 5538412 1253423..1254673 1 NC_009767.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_3699 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 1254673 5538412 Rcas_0946 Roseiflexus castenholzii DSM 13941 glucose-1-phosphate adenylyltransferase YP_001431078.1 1253423 D 383372 CDS YP_001431079.1 156740950 5538413 1254682..1255929 1 NC_009767.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_3698 nucleotidyl transferase; nucleotidyl transferase 1255929 5538413 Rcas_0947 Roseiflexus castenholzii DSM 13941 nucleotidyl transferase YP_001431079.1 1254682 D 383372 CDS YP_001431080.1 156740951 5538414 1255948..1256472 1 NC_009767.1 KEGG: rrs:RoseRS_3697 membrane-flanked domain; hypothetical protein 1256472 5538414 Rcas_0948 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431080.1 1255948 D 383372 CDS YP_001431081.1 156740952 5538415 complement(1256474..1257379) 1 NC_009767.1 PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3696 PfkB domain protein; ribokinase-like domain-containing protein 1257379 5538415 Rcas_0949 Roseiflexus castenholzii DSM 13941 ribokinase-like domain-containing protein YP_001431081.1 1256474 R 383372 CDS YP_001431082.1 156740953 5538416 1257441..1258985 1 NC_009767.1 PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3695 carboxyl transferase; carboxyl transferase 1258985 5538416 Rcas_0950 Roseiflexus castenholzii DSM 13941 carboxyl transferase YP_001431082.1 1257441 D 383372 CDS YP_001431083.1 156740954 5538417 1258996..1259340 1 NC_009767.1 PFAM: sodium pump decarboxylase gamma subunit; KEGG: rrs:RoseRS_3694 hypothetical protein; sodium pump decarboxylase subunit gamma 1259340 5538417 Rcas_0951 Roseiflexus castenholzii DSM 13941 sodium pump decarboxylase subunit gamma YP_001431083.1 1258996 D 383372 CDS YP_001431084.1 156740955 5538418 1259337..1259792 1 NC_009767.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rrs:RoseRS_3693 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 1259792 5538418 Rcas_0952 Roseiflexus castenholzii DSM 13941 biotin/lipoyl attachment domain-containing protein YP_001431084.1 1259337 D 383372 CDS YP_001431085.1 156740956 5538419 1260493..1261623 1 NC_009767.1 KEGG: rrs:RoseRS_3692 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 1261623 5538419 Rcas_0953 Roseiflexus castenholzii DSM 13941 sodium ion-translocating decarboxylase subunit beta YP_001431085.1 1260493 D 383372 CDS YP_001431086.1 156740957 5538421 1262823..1263137 1 NC_009767.1 KEGG: mta:Moth_1571 hypothetical protein; hypothetical protein 1263137 5538421 Rcas_0955 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431086.1 1262823 D 383372 CDS YP_001431087.1 156740958 5538422 1263134..1263376 1 NC_009767.1 hypothetical protein 1263376 5538422 Rcas_0956 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431087.1 1263134 D 383372 CDS YP_001431088.1 156740959 5538423 1263610..1264467 1 NC_009767.1 hypothetical protein 1264467 5538423 Rcas_0957 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431088.1 1263610 D 383372 CDS YP_001431089.1 156740960 5538424 1264470..1265696 1 NC_009767.1 KEGG: rrs:RoseRS_3691 hypothetical protein; hypothetical protein 1265696 5538424 Rcas_0958 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431089.1 1264470 D 383372 CDS YP_001431090.1 156740961 5538425 complement(1265778..1267193) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3486 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1267193 5538425 Rcas_0959 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001431090.1 1265778 R 383372 CDS YP_001431091.1 156740962 5538426 complement(1267196..1267906) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3485 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1267906 5538426 Rcas_0960 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001431091.1 1267196 R 383372 CDS YP_001431092.1 156740963 5538427 complement(1267903..1268283) 1 NC_009767.1 KEGG: rrs:RoseRS_3484 hypothetical protein; hypothetical protein 1268283 5538427 Rcas_0961 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431092.1 1267903 R 383372 CDS YP_001431093.1 156740964 5538428 complement(1268280..1268807) 1 NC_009767.1 KEGG: rrs:RoseRS_3483 hypothetical protein; hypothetical protein 1268807 5538428 Rcas_0962 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431093.1 1268280 R 383372 CDS YP_001431094.1 156740965 5538429 complement(1269125..1269739) 1 NC_009767.1 PFAM: protein of unknown function DUF461; KEGG: rrs:RoseRS_3482 protein of unknown function DUF461; hypothetical protein 1269739 5538429 Rcas_0963 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431094.1 1269125 R 383372 CDS YP_001431095.1 156740966 5538430 complement(1270075..1270506) 1 NC_009767.1 KEGG: rrs:RoseRS_3481 hypothetical protein; hypothetical protein 1270506 5538430 Rcas_0964 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431095.1 1270075 R 383372 CDS YP_001431096.1 156740967 5538431 1270574..1270987 1 NC_009767.1 KEGG: rrs:RoseRS_3513 hypothetical protein; hypothetical protein 1270987 5538431 Rcas_0965 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431096.1 1270574 D 383372 CDS YP_001431097.1 156740968 5538432 1271116..1271967 1 NC_009767.1 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase 1271967 5538432 Rcas_0966 Roseiflexus castenholzii DSM 13941 phosphonoacetaldehyde hydrolase YP_001431097.1 1271116 D 383372 CDS YP_001431098.1 156740969 5538433 1272398..1273132 1 NC_009767.1 KEGG: msm:MSMEG_3463 esterase; esterase 1273132 5538433 Rcas_0967 Roseiflexus castenholzii DSM 13941 esterase YP_001431098.1 1272398 D 383372 CDS YP_001431099.1 156740970 5538435 1273560..1274210 1 NC_009767.1 PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_3834 transcriptional regulator, TetR family; TetR family transcriptional regulator 1274210 5538435 Rcas_0969 Roseiflexus castenholzii DSM 13941 TetR family transcriptional regulator YP_001431099.1 1273560 D 383372 CDS YP_001431100.1 156740971 5538436 1274215..1275066 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3832 ABC transporter related; ABC transporter-like protein 1275066 5538436 Rcas_0970 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431100.1 1274215 D 383372 CDS YP_001431101.1 156740972 5538437 1275063..1275773 1 NC_009767.1 PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_3831 ABC-2 type transporter; ABC-2 type transporter 1275773 5538437 Rcas_0971 Roseiflexus castenholzii DSM 13941 ABC-2 type transporter YP_001431101.1 1275063 D 383372 CDS YP_001431102.1 156740973 5538438 1275770..1276510 1 NC_009767.1 KEGG: rrs:RoseRS_3830 hypothetical protein; hypothetical protein 1276510 5538438 Rcas_0972 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431102.1 1275770 D 383372 CDS YP_001431103.1 156740974 5538439 1276516..1277103 1 NC_009767.1 KEGG: rrs:RoseRS_3829 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1277103 5538439 Rcas_0973 Roseiflexus castenholzii DSM 13941 metal dependent phosphohydrolase YP_001431103.1 1276516 D 383372 CDS YP_001431104.1 156740975 5538440 1277179..1278204 1 NC_009767.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: rrs:RoseRS_3828 galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase 1278204 5538440 Rcas_0974 Roseiflexus castenholzii DSM 13941 galactose-1-phosphate uridylyltransferase YP_001431104.1 1277179 D 383372 CDS YP_001431105.1 156740976 5538441 1278191..1279798 1 NC_009767.1 PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3827 propionyl-CoA carboxylase; propionyl-CoA carboxylase 1279798 5538441 Rcas_0975 Roseiflexus castenholzii DSM 13941 propionyl-CoA carboxylase YP_001431105.1 1278191 D 383372 CDS YP_001431106.1 156740977 5538442 1279809..1280471 1 NC_009767.1 KEGG: rrs:RoseRS_3826 hypothetical protein; hypothetical protein 1280471 5538442 Rcas_0976 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431106.1 1279809 D 383372 CDS YP_001431107.1 156740978 5538443 1280471..1281241 1 NC_009767.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_3825 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1281241 5538443 Rcas_0977 Roseiflexus castenholzii DSM 13941 enoyl-CoA hydratase/isomerase YP_001431107.1 1280471 D 383372 CDS YP_001431108.1 156740979 5538444 complement(1281372..1282226) 1 NC_009767.1 KEGG: bcl:ABC1967 hypothetical protein; hypothetical protein 1282226 5538444 Rcas_0978 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431108.1 1281372 R 383372 CDS YP_001431109.1 156740980 5538445 complement(1282446..1284425) 1 NC_009767.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_0434 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding 1284425 5538445 Rcas_0979 Roseiflexus castenholzii DSM 13941 carbamoyl-phosphate synthase L chain ATP-binding YP_001431109.1 1282446 R 383372 CDS YP_001431110.1 156740981 5538446 complement(1285128..1285859) 1 NC_009767.1 KEGG: rrs:RoseRS_0432 hypothetical protein; hypothetical protein 1285859 5538446 Rcas_0980 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431110.1 1285128 R 383372 CDS YP_001431111.1 156740982 5538447 1285991..1287325 1 NC_009767.1 TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: rrs:RoseRS_0431 hydroxymethylglutaryl-CoA reductase, degradative; hydroxymethylglutaryl-CoA reductase, degradative 1287325 5538447 Rcas_0981 Roseiflexus castenholzii DSM 13941 hydroxymethylglutaryl-CoA reductase, degradative YP_001431111.1 1285991 D 383372 CDS YP_001431112.1 156740983 5538448 1287472..1288518 1 NC_009767.1 TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: rrs:RoseRS_0430 hydroxymethylglutaryl-CoA synthase; hypothetical protein 1288518 5538448 Rcas_0982 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431112.1 1287472 D 383372 CDS YP_001431113.1 156740984 5538449 1288523..1289677 1 NC_009767.1 KEGG: rrs:RoseRS_0429 acetyl-CoA acetyltransferase-like protein; acetyl-CoA acetyltransferase-like protein 1289677 5538449 Rcas_0983 Roseiflexus castenholzii DSM 13941 acetyl-CoA acetyltransferase-like protein YP_001431113.1 1288523 D 383372 CDS YP_001431114.1 156740985 5538450 1289693..1290091 1 NC_009767.1 PFAM: protein of unknown function DUF35; KEGG: rrs:RoseRS_0428 protein of unknown function DUF35; hypothetical protein 1290091 5538450 Rcas_0984 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431114.1 1289693 D 383372 CDS YP_001431115.1 156740986 5538454 complement(1291498..1292055) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3810 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 1292055 5538454 Rcas_0988 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001431115.1 1291498 R 383372 CDS YP_001431116.1 156740987 5538455 1292200..1292856 1 NC_009767.1 KEGG: rrs:RoseRS_3811 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1292856 5538455 Rcas_0989 Roseiflexus castenholzii DSM 13941 protein-L-isoaspartate O-methyltransferase YP_001431116.1 1292200 D 383372 CDS YP_001431117.1 156740988 5538456 1292873..1293547 1 NC_009767.1 PFAM: peptidase M50; KEGG: rrs:RoseRS_3812 peptidase M50; peptidase M50 1293547 5538456 Rcas_0990 Roseiflexus castenholzii DSM 13941 peptidase M50 YP_001431117.1 1292873 D 383372 CDS YP_001431118.1 156740989 5538457 1293558..1294322 1 NC_009767.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1294322 tpiA 5538457 tpiA Roseiflexus castenholzii DSM 13941 triosephosphate isomerase YP_001431118.1 1293558 D 383372 CDS YP_001431119.1 156740990 5538459 complement(1295421..1295804) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3814 response regulator receiver protein; response regulator receiver protein 1295804 5538459 Rcas_0993 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001431119.1 1295421 R 383372 CDS YP_001431120.1 156740991 5538460 1296347..1298707 1 NC_009767.1 KEGG: rrs:RoseRS_3815 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 1298707 5538460 Rcas_0994 Roseiflexus castenholzii DSM 13941 ATP-dependent protease La YP_001431120.1 1296347 D 383372 CDS YP_001431121.1 156740992 5538461 complement(1298947..1301325) 1 NC_009767.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_3816 diguanylate cyclase with PAS/PAC sensor; GAF sensor-containing diguanylate cyclase 1301325 5538461 Rcas_0995 Roseiflexus castenholzii DSM 13941 GAF sensor-containing diguanylate cyclase YP_001431121.1 1298947 R 383372 CDS YP_001431122.1 156740993 5538462 complement(1301442..1302632) 1 NC_009767.1 KEGG: rrs:RoseRS_3817 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 1302632 5538462 Rcas_0996 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor signal transduction histidine kinase YP_001431122.1 1301442 R 383372 CDS YP_001431123.1 156740994 5538463 complement(1302663..1303355) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3818 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1303355 5538463 Rcas_0997 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001431123.1 1302663 R 383372 CDS YP_001431124.1 156740995 5538464 complement(1303441..1304616) 1 NC_009767.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_3819 galactokinase; galactokinase 1304616 5538464 Rcas_0998 Roseiflexus castenholzii DSM 13941 galactokinase YP_001431124.1 1303441 R 383372 CDS YP_001431125.1 156740996 5538465 1304888..1307128 1 NC_009767.1 KEGG: rrs:RoseRS_3820 hypothetical protein; hypothetical protein 1307128 5538465 Rcas_0999 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431125.1 1304888 D 383372 CDS YP_001431126.1 156740997 5538466 1307187..1310051 1 NC_009767.1 KEGG: rrs:RoseRS_3821 hypothetical protein; hypothetical protein 1310051 5538466 Rcas_1000 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431126.1 1307187 D 383372 CDS YP_001431127.1 156740998 5538467 complement(1310118..1310993) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_3822 alpha/beta hydrolase fold; alpha/beta hydrolase 1310993 5538467 Rcas_1001 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001431127.1 1310118 R 383372 CDS YP_001431128.1 156740999 5538468 1311104..1311949 1 NC_009767.1 PFAM: NERD domain protein; DNA topoisomerase type IA zn finger domain protein; KEGG: tte:TTE0673 hypothetical protein; NERD domain-containing protein 1311949 5538468 Rcas_1002 Roseiflexus castenholzii DSM 13941 NERD domain-containing protein YP_001431128.1 1311104 D 383372 CDS YP_001431129.1 156741000 5538469 complement(1312488..1314092) 1 NC_009767.1 KEGG: rrs:RoseRS_0437 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; L-aspartate oxidase 1314092 5538469 Rcas_1003 Roseiflexus castenholzii DSM 13941 L-aspartate oxidase YP_001431129.1 1312488 R 383372 CDS YP_001431130.1 156741001 5538470 complement(1314333..1315364) 1 NC_009767.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1315364 5538470 Rcas_1004 Roseiflexus castenholzii DSM 13941 quinolinate synthetase YP_001431130.1 1314333 R 383372 CDS YP_001431131.1 156741002 5538471 complement(1315364..1316233) 1 NC_009767.1 KEGG: rrs:RoseRS_0439 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 1316233 5538471 Rcas_1005 Roseiflexus castenholzii DSM 13941 nicotinate-nucleotide pyrophosphorylase YP_001431131.1 1315364 R 383372 CDS YP_001431132.1 156741003 5538472 1316926..1317186 1 NC_009767.1 hypothetical protein 1317186 5538472 Rcas_1006 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431132.1 1316926 D 383372 CDS YP_001431133.1 156741004 5538473 complement(1317209..1317421) 1 NC_009767.1 PFAM: YcfA family protein; hypothetical protein 1317421 5538473 Rcas_1007 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431133.1 1317209 R 383372 CDS YP_001431134.1 156741005 5538474 complement(1317418..1317678) 1 NC_009767.1 PFAM: protein of unknown function UPF0150; KEGG: rrs:RoseRS_1435 protein of unknown function UPF0150; hypothetical protein 1317678 5538474 Rcas_1008 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431134.1 1317418 R 383372 CDS YP_001431135.1 156741006 5538475 1319117..1320172 1 NC_009767.1 KEGG: rrs:RoseRS_0652 regulatory protein, DeoR; regulatory protein, DeoR 1320172 5538475 Rcas_1009 Roseiflexus castenholzii DSM 13941 regulatory protein, DeoR YP_001431135.1 1319117 D 383372 CDS YP_001431136.1 156741007 5538476 1320175..1322754 1 NC_009767.1 KEGG: afu:AF0071 ATP-dependent RNA helicase, TIGRFAM: CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; CRISPR-associated helicase Cas3 1322754 5538476 Rcas_1010 Roseiflexus castenholzii DSM 13941 CRISPR-associated helicase Cas3 YP_001431136.1 1320175 D 383372 CDS YP_001431137.1 156741008 5538477 1322754..1324499 1 NC_009767.1 hypothetical protein 1324499 5538477 Rcas_1011 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431137.1 1322754 D 383372 CDS YP_001431138.1 156741009 5538478 1324532..1325479 1 NC_009767.1 TIGRFAM: CRISPR-associated autoregulator DevR family; PFAM: CRISPR-associated regulatory Csa2 family protein; KEGG: afu:AF0068 hypothetical protein; CRISPR-associated autoregulator DevR family protein 1325479 5538478 Rcas_1012 Roseiflexus castenholzii DSM 13941 CRISPR-associated autoregulator DevR family protein YP_001431138.1 1324532 D 383372 CDS YP_001431139.1 156741010 5538479 1325482..1326177 1 NC_009767.1 KEGG: afu:AF0067 A. fulgidus predicted coding region AF0067; hypothetical protein 1326177 5538479 Rcas_1013 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431139.1 1325482 D 383372 CDS YP_001431140.1 156741011 5538480 complement(1326339..1326665) 1 NC_009767.1 hypothetical protein 1326665 5538480 Rcas_1014 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431140.1 1326339 R 383372 CDS YP_001431141.1 156741012 5538481 complement(1326646..1326951) 1 NC_009767.1 hypothetical protein 1326951 5538481 Rcas_1015 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431141.1 1326646 R 383372 CDS YP_001431142.1 156741013 5538482 1326971..1327324 1 NC_009767.1 hypothetical protein 1327324 5538482 Rcas_1016 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431142.1 1326971 D 383372 CDS YP_001431143.1 156741014 5538486 complement(1330245..1330565) 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3041 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1330565 5538486 Rcas_1020 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001431143.1 1330245 R 383372 CDS YP_001431144.1 156741015 5538488 complement(1331690..1332994) 1 NC_009767.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3432 PucC protein; PUCC protein 1332994 5538488 Rcas_1022 Roseiflexus castenholzii DSM 13941 PUCC protein YP_001431144.1 1331690 R 383372 CDS YP_001431145.1 156741016 5538489 1333202..1333486 1 NC_009767.1 KEGG: rrs:RoseRS_3431 hypothetical protein; hypothetical protein 1333486 5538489 Rcas_1023 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431145.1 1333202 D 383372 CDS YP_001431146.1 156741017 5538490 complement(1333533..1336034) 1 NC_009767.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_3430 DEAD/H associated domain protein; DEAD/DEAH box helicase 1336034 5538490 Rcas_1024 Roseiflexus castenholzii DSM 13941 DEAD/DEAH box helicase YP_001431146.1 1333533 R 383372 CDS YP_001431147.1 156741018 5538491 complement(1336424..1337290) 1 NC_009767.1 KEGG: rrs:RoseRS_4328 hypothetical protein; hypothetical protein 1337290 5538491 Rcas_1025 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431147.1 1336424 R 383372 CDS YP_001431148.1 156741019 5538492 1338035..1339258 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_0398 major facilitator superfamily MFS_1; major facilitator transporter 1339258 5538492 Rcas_1026 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001431148.1 1338035 D 383372 CDS YP_001431149.1 156741020 5538493 complement(1339704..1341098) 1 NC_009767.1 KEGG: rrs:RoseRS_0399 hypothetical protein; hypothetical protein 1341098 5538493 Rcas_1027 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431149.1 1339704 R 383372 CDS YP_001431150.1 156741021 5538494 1341280..1342032 1 NC_009767.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0400 methyltransferase type 11; type 11 methyltransferase 1342032 5538494 Rcas_1028 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001431150.1 1341280 D 383372 CDS YP_001431151.1 156741022 5538495 1342052..1343134 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: tfu:Tfu_2541 glycosyl transferase; glycosyl transferase family protein 1343134 5538495 Rcas_1029 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431151.1 1342052 D 383372 CDS YP_001431152.1 156741023 5538496 1343131..1344615 1 NC_009767.1 PFAM: sugar transferase; KEGG: rrs:RoseRS_0402 sugar transferase; sugar transferase 1344615 5538496 Rcas_1030 Roseiflexus castenholzii DSM 13941 sugar transferase YP_001431152.1 1343131 D 383372 CDS YP_001431153.1 156741024 5538497 1344739..1347420 1 NC_009767.1 KEGG: rrs:RoseRS_0403 hypothetical protein; hypothetical protein 1347420 5538497 Rcas_1031 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431153.1 1344739 D 383372 CDS YP_001431154.1 156741025 5538498 complement(1347708..1349060) 1 NC_009767.1 PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_0404 aminotransferase class-III; class III aminotransferase 1349060 5538498 Rcas_1032 Roseiflexus castenholzii DSM 13941 class III aminotransferase YP_001431154.1 1347708 R 383372 CDS YP_001431155.1 156741026 5538499 1349342..1349950 1 NC_009767.1 KEGG: rrs:RoseRS_0405 hypothetical protein; hypothetical protein 1349950 5538499 Rcas_1033 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431155.1 1349342 D 383372 CDS YP_001431156.1 156741027 5538500 complement(1350031..1351377) 1 NC_009767.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rrs:RoseRS_0406 diaminopimelate decarboxylase; diaminopimelate decarboxylase 1351377 5538500 Rcas_1034 Roseiflexus castenholzii DSM 13941 diaminopimelate decarboxylase YP_001431156.1 1350031 R 383372 CDS YP_001431157.1 156741028 5538501 complement(1351603..1353054) 1 NC_009767.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 1353054 5538501 Rcas_1035 Roseiflexus castenholzii DSM 13941 potassium/proton antiporter YP_001431157.1 1351603 R 383372 CDS YP_001431158.1 156741029 5538502 complement(1353514..1354020) 1 NC_009767.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_0408 redoxin domain protein; redoxin domain-containing protein 1354020 5538502 Rcas_1036 Roseiflexus castenholzii DSM 13941 redoxin domain-containing protein YP_001431158.1 1353514 R 383372 CDS YP_001431159.1 156741030 5538503 1354244..1355698 1 NC_009767.1 TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: rrs:RoseRS_0409 PAS/PAC sensor protein; PAS/PAC sensor protein 1355698 5538503 Rcas_1037 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001431159.1 1354244 D 383372 CDS YP_001431160.1 156741031 5538506 1357039..1357689 1 NC_009767.1 PFAM: regulatory protein LuxR; KEGG: aav:Aave_4229 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1357689 5538506 Rcas_1040 Roseiflexus castenholzii DSM 13941 LuxR family transcriptional regulator YP_001431160.1 1357039 D 383372 CDS YP_001431161.1 156741032 5538507 complement(1357692..1358978) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4378 major facilitator superfamily MFS_1; major facilitator transporter 1358978 5538507 Rcas_1041 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001431161.1 1357692 R 383372 CDS YP_001431162.1 156741033 5538508 complement(1359005..1359934) 1 NC_009767.1 PFAM: NHL repeat containing protein; KEGG: rrs:RoseRS_4377 hypothetical protein; NHL repeat-containing protein 1359934 5538508 Rcas_1042 Roseiflexus castenholzii DSM 13941 NHL repeat-containing protein YP_001431162.1 1359005 R 383372 CDS YP_001431163.1 156741034 5538509 1360250..1360666 1 NC_009767.1 KEGG: aav:Aave_4229 two component transcriptional regulator, LuxR family; response regulator receiver protein 1360666 5538509 Rcas_1043 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001431163.1 1360250 D 383372 CDS YP_001431164.1 156741035 5538510 1360779..1361051 1 NC_009767.1 PFAM: regulatory protein LuxR; KEGG: sye:Syncc9902_1855 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1361051 5538510 Rcas_1044 Roseiflexus castenholzii DSM 13941 LuxR family transcriptional regulator YP_001431164.1 1360779 D 383372 CDS YP_001431165.1 156741036 5538511 complement(1361115..1361486) 1 NC_009767.1 KEGG: rrs:RoseRS_4491 hypothetical protein; hypothetical protein 1361486 5538511 Rcas_1045 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431165.1 1361115 R 383372 CDS YP_001431166.1 156741037 5538512 complement(1361957..1362469) 1 NC_009767.1 KEGG: rrs:RoseRS_4492 hypothetical protein; hypothetical protein 1362469 5538512 Rcas_1046 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431166.1 1361957 R 383372 CDS YP_001431167.1 156741038 5538513 1362723..1364984 1 NC_009767.1 PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_0410 glycosyl transferase, family 39; glycosyl transferase family protein 1364984 5538513 Rcas_1047 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431167.1 1362723 D 383372 CDS YP_001431168.1 156741039 5538514 complement(1365466..1365906) 1 NC_009767.1 KEGG: mgi:Mflv_5589 aminoglycoside nucleotidyltransferase; hypothetical protein 1365906 5538514 Rcas_1048 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431168.1 1365466 R 383372 CDS YP_001431169.1 156741040 5538515 complement(1366201..1366386) 1 NC_009767.1 KEGG: psb:Psyr_1790 aldo/keto reductase; hypothetical protein 1366386 5538515 Rcas_1049 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431169.1 1366201 R 383372 CDS YP_001431170.1 156741041 5538516 complement(1366370..1366768) 1 NC_009767.1 KEGG: rle:RL2357 hypothetical protein; hypothetical protein 1366768 5538516 Rcas_1050 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431170.1 1366370 R 383372 CDS YP_001431171.1 156741042 5538517 complement(1366803..1367663) 1 NC_009767.1 PFAM: aldo/keto reductase; KEGG: gur:Gura_4373 2,5-didehydrogluconate reductase; 2,5-didehydrogluconate reductase 1367663 5538517 Rcas_1051 Roseiflexus castenholzii DSM 13941 2,5-didehydrogluconate reductase YP_001431171.1 1366803 R 383372 CDS YP_001431172.1 156741043 5538518 complement(1368127..1368522) 1 NC_009767.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: aba:Acid345_2510 conserved hypothetical protein, cupin barrel; cupin 1368522 5538518 Rcas_1052 Roseiflexus castenholzii DSM 13941 cupin YP_001431172.1 1368127 R 383372 CDS YP_001431173.1 156741044 5538520 1368865..1369800 1 NC_009767.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pmy:Pmen_2638 AraC-type transcriptional regulator domain protein; AraC family transcriptional regulator 1369800 5538520 Rcas_1054 Roseiflexus castenholzii DSM 13941 AraC family transcriptional regulator YP_001431173.1 1368865 D 383372 CDS YP_001431174.1 156741045 5538521 1369819..1370346 1 NC_009767.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: dsy:DSY4378 hypothetical protein; deaminase-reductase domain-containing protein 1370346 5538521 Rcas_1055 Roseiflexus castenholzii DSM 13941 deaminase-reductase domain-containing protein YP_001431174.1 1369819 D 383372 CDS YP_001431175.1 156741046 5538522 complement(1370451..1370768) 1 NC_009767.1 hypothetical protein 1370768 5538522 Rcas_1056 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431175.1 1370451 R 383372 CDS YP_001431176.1 156741047 5538523 complement(1370983..1373139) 1 NC_009767.1 KEGG: rrs:RoseRS_0412 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; multi-sensor signal transduction histidine kinase 1373139 5538523 Rcas_1057 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001431176.1 1370983 R 383372 CDS YP_001431177.1 156741048 5538524 1373498..1375459 1 NC_009767.1 KEGG: rrs:RoseRS_0413 ABC-type dipeptide transport system periplasmic component-like protein; dipeptide ABC transporter periplasmic component-like protein 1375459 5538524 Rcas_1058 Roseiflexus castenholzii DSM 13941 dipeptide ABC transporter periplasmic component-like protein YP_001431177.1 1373498 D 383372 CDS YP_001431178.1 156741049 5538525 1375556..1376758 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0414 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1376758 5538525 Rcas_1059 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001431178.1 1375556 D 383372 CDS YP_001431179.1 156741050 5538526 1376771..1377775 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0415 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1377775 5538526 Rcas_1060 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001431179.1 1376771 D 383372 CDS YP_001431180.1 156741051 5538527 1377837..1378829 1 NC_009767.1 KEGG: rrs:RoseRS_0416 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1378829 5538527 Rcas_1061 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001431180.1 1377837 D 383372 CDS YP_001431181.1 156741052 5538528 1378845..1379855 1 NC_009767.1 KEGG: rrs:RoseRS_0417 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1379855 5538528 Rcas_1062 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001431181.1 1378845 D 383372 CDS YP_001431182.1 156741053 5538529 1379868..1380887 1 NC_009767.1 KEGG: rrs:RoseRS_0418 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1380887 5538529 Rcas_1063 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001431182.1 1379868 D 383372 CDS YP_001431183.1 156741054 5538530 1380914..1381945 1 NC_009767.1 KEGG: rrs:RoseRS_0419 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1381945 5538530 Rcas_1064 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001431183.1 1380914 D 383372 CDS YP_001431184.1 156741055 5538531 1382543..1383121 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0420 protein of unknown function DUF820; hypothetical protein 1383121 5538531 Rcas_1065 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431184.1 1382543 D 383372 CDS YP_001431185.1 156741056 5538532 complement(1384316..1385203) 1 NC_009767.1 PFAM: YdjC family protein; KEGG: rrs:RoseRS_0422 YdjC family protein; hypothetical protein 1385203 5538532 Rcas_1066 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431185.1 1384316 R 383372 CDS YP_001431186.1 156741057 5538533 complement(1385219..1385854) 1 NC_009767.1 KEGG: rrs:RoseRS_0423 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 1385854 5538533 Rcas_1067 Roseiflexus castenholzii DSM 13941 pyridoxamine 5'-phosphate oxidase YP_001431186.1 1385219 R 383372 CDS YP_001431187.1 156741058 5538534 complement(1386147..1387262) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0424 glycosyl transferase, group 1; group 1 glycosyl transferase 1387262 5538534 Rcas_1068 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431187.1 1386147 R 383372 CDS YP_001431188.1 156741059 5538535 1387687..1388193 1 NC_009767.1 PFAM: Peptidoglycan-binding LysM; KEGG: rrs:RoseRS_0425 peptidoglycan-binding LysM; peptidoglycan-binding protein LysM 1388193 5538535 Rcas_1069 Roseiflexus castenholzii DSM 13941 peptidoglycan-binding protein LysM YP_001431188.1 1387687 D 383372 CDS YP_001431189.1 156741060 5538536 complement(1388419..1389075) 1 NC_009767.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1389075 5538536 Rcas_1070 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L25 YP_001431189.1 1388419 R 383372 CDS YP_001431190.1 156741061 5538537 1389315..1389971 1 NC_009767.1 KEGG: rrs:RoseRS_0427 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: peptidase S24 S26A and S26B; LexA DNA-binding domain protein; SOS-response transcriptional repressor LexA 1389971 5538537 Rcas_1071 Roseiflexus castenholzii DSM 13941 SOS-response transcriptional repressor LexA YP_001431190.1 1389315 D 383372 CDS YP_001431191.1 156741062 5538538 1390002..1390598 1 NC_009767.1 PFAM: protein of unknown function DUF205; KEGG: rrs:RoseRS_3809 protein of unknown function DUF205; hypothetical protein 1390598 5538538 Rcas_1072 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431191.1 1390002 D 383372 CDS YP_001431192.1 156741063 5538539 complement(1390595..1391752) 1 NC_009767.1 PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3808 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1391752 5538539 Rcas_1073 Roseiflexus castenholzii DSM 13941 FAD dependent oxidoreductase YP_001431192.1 1390595 R 383372 CDS YP_001431193.1 156741064 5538540 complement(1391791..1393443) 1 NC_009767.1 KEGG: xft:PD1607 modification methylase NspV; modification methylase NspV 1393443 5538540 Rcas_1074 Roseiflexus castenholzii DSM 13941 modification methylase NspV YP_001431193.1 1391791 R 383372 CDS YP_001431194.1 156741065 5538542 complement(1394118..1395752) 1 NC_009767.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_3807 AAA ATPase, central domain protein; recombination factor protein RarA 1395752 5538542 Rcas_1076 Roseiflexus castenholzii DSM 13941 recombination factor protein RarA YP_001431194.1 1394118 R 383372 CDS YP_001431195.1 156741066 5538543 complement(1396095..1396355) 1 NC_009767.1 PFAM: Transglycosylase-associated protein; KEGG: rrs:RoseRS_3806 transglycosylase-associated protein; transglycosylase-associated protein 1396355 5538543 Rcas_1077 Roseiflexus castenholzii DSM 13941 transglycosylase-associated protein YP_001431195.1 1396095 R 383372 CDS YP_001431196.1 156741067 5538544 1397016..1398056 1 NC_009767.1 PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_3805 histone deacetylase superfamily; histone deacetylase superfamily protein 1398056 5538544 Rcas_1078 Roseiflexus castenholzii DSM 13941 histone deacetylase superfamily protein YP_001431196.1 1397016 D 383372 CDS YP_001431197.1 156741068 5538545 1398063..1398647 1 NC_009767.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 1398647 5538545 Rcas_1079 Roseiflexus castenholzii DSM 13941 thymidine kinase YP_001431197.1 1398063 D 383372 CDS YP_001431198.1 156741069 5538546 complement(1398657..1399574) 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0124 site-specific DNA-methyltransferase (adenine-specific); adenine-specific DNA methyltransferase 1399574 5538546 Rcas_1080 Roseiflexus castenholzii DSM 13941 adenine-specific DNA methyltransferase YP_001431198.1 1398657 R 383372 CDS YP_001431199.1 156741070 5538547 1399969..1401078 1 NC_009767.1 PFAM: mannose-6-phosphate isomerase type I; KEGG: rrs:RoseRS_3802 mannose-6-phosphate isomerase; mannose-6-phosphate isomerase 1401078 5538547 Rcas_1081 Roseiflexus castenholzii DSM 13941 mannose-6-phosphate isomerase YP_001431199.1 1399969 D 383372 CDS YP_001431200.1 156741071 5538548 1401313..1402320 1 NC_009767.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: rrs:RoseRS_3801 protein of unknown function DUF95, transmembrane; hypothetical protein 1402320 5538548 Rcas_1082 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431200.1 1401313 D 383372 CDS YP_001431201.1 156741072 5538550 complement(1404006..1405415) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3797 major facilitator superfamily MFS_1; major facilitator transporter 1405415 5538550 Rcas_1084 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001431201.1 1404006 R 383372 CDS YP_001431202.1 156741073 5538551 1405755..1408355 1 NC_009767.1 KEGG: rrs:RoseRS_3796 hypothetical protein; hypothetical protein 1408355 5538551 Rcas_1085 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431202.1 1405755 D 383372 CDS YP_001431203.1 156741074 5538552 1408624..1409376 1 NC_009767.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: rrs:RoseRS_3795 methionine aminopeptidase, type I; methionine aminopeptidase 1409376 5538552 Rcas_1086 Roseiflexus castenholzii DSM 13941 methionine aminopeptidase YP_001431203.1 1408624 D 383372 CDS YP_001431204.1 156741075 5538553 complement(1409381..1410574) 1 NC_009767.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: rrs:RoseRS_3794 cell division protein FtsZ; cell division protein FtsZ 1410574 5538553 Rcas_1087 Roseiflexus castenholzii DSM 13941 cell division protein FtsZ YP_001431204.1 1409381 R 383372 CDS YP_001431205.1 156741076 5538554 complement(1410592..1411836) 1 NC_009767.1 PFAM: cell division protein FtsA; KEGG: rrs:RoseRS_3793 cell division protein FtsA; cell division protein FtsA 1411836 5538554 Rcas_1088 Roseiflexus castenholzii DSM 13941 cell division protein FtsA YP_001431205.1 1410592 R 383372 CDS YP_001431206.1 156741077 5538555 complement(1411854..1412681) 1 NC_009767.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: rrs:RoseRS_3792 polypeptide-transport-associated domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein 1412681 5538555 Rcas_1089 Roseiflexus castenholzii DSM 13941 polypeptide-transport-associated domain-containing protein YP_001431206.1 1411854 R 383372 CDS YP_001431207.1 156741078 5538556 complement(1412674..1413789) 1 NC_009767.1 KEGG: rrs:RoseRS_3791 D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1413789 5538556 Rcas_1090 Roseiflexus castenholzii DSM 13941 D-alanine--D-alanine ligase YP_001431207.1 1412674 R 383372 CDS YP_001431208.1 156741079 5538557 complement(1413828..1414715) 1 NC_009767.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1414715 5538557 Rcas_1091 Roseiflexus castenholzii DSM 13941 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001431208.1 1413828 R 383372 CDS YP_001431209.1 156741080 5538558 complement(1414719..1415996) 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3789 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1415996 5538558 Rcas_1092 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431209.1 1414719 R 383372 CDS YP_001431210.1 156741081 5538559 complement(1415993..1417423) 1 NC_009767.1 TIGRFAM: UDP-N-acetylmuramate--alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_3788 UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 1417423 5538559 Rcas_1093 Roseiflexus castenholzii DSM 13941 UDP-N-acetylmuramate--L-alanine ligase YP_001431210.1 1415993 R 383372 CDS YP_001431211.1 156741082 5538560 complement(1417442..1418089) 1 NC_009767.1 KEGG: rrs:RoseRS_3787 hypothetical protein; hypothetical protein 1418089 5538560 Rcas_1094 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431211.1 1417442 R 383372 CDS YP_001431212.1 156741083 5538561 complement(1418086..1419396) 1 NC_009767.1 PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; KEGG: rrs:RoseRS_3786 UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1419396 5538561 Rcas_1095 Roseiflexus castenholzii DSM 13941 UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001431212.1 1418086 R 383372 CDS YP_001431213.1 156741084 5538562 complement(1419257..1420519) 1 NC_009767.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rrs:RoseRS_3785 cell division protein FtsW; cell division protein FtsW 1420519 5538562 Rcas_1096 Roseiflexus castenholzii DSM 13941 cell division protein FtsW YP_001431213.1 1419257 R 383372 CDS YP_001431214.1 156741085 5538563 complement(1420572..1421417) 1 NC_009767.1 PFAM: Rhomboid family protein; KEGG: rrs:RoseRS_3784 rhomboid family protein; rhomboid family protein 1421417 5538563 Rcas_1097 Roseiflexus castenholzii DSM 13941 rhomboid family protein YP_001431214.1 1420572 R 383372 CDS YP_001431215.1 156741086 5538564 complement(1421414..1422832) 1 NC_009767.1 TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_3783 UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1422832 5538564 Rcas_1098 Roseiflexus castenholzii DSM 13941 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_001431215.1 1421414 R 383372 CDS YP_001431216.1 156741087 5538565 complement(1422837..1423928) 1 NC_009767.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1423928 mraY 5538565 mraY Roseiflexus castenholzii DSM 13941 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001431216.1 1422837 R 383372 CDS YP_001431217.1 156741088 5538566 complement(1423980..1425437) 1 NC_009767.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_3781 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 1425437 5538566 Rcas_1100 Roseiflexus castenholzii DSM 13941 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001431217.1 1423980 R 383372 CDS YP_001431218.1 156741089 5538567 complement(1425522..1427378) 1 NC_009767.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rrs:RoseRS_3780 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 1427378 5538567 Rcas_1101 Roseiflexus castenholzii DSM 13941 peptidoglycan glycosyltransferase YP_001431218.1 1425522 R 383372 CDS YP_001431219.1 156741090 5538568 complement(1427390..1427788) 1 NC_009767.1 KEGG: rrs:RoseRS_3779 hypothetical protein; hypothetical protein 1427788 5538568 Rcas_1102 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431219.1 1427390 R 383372 CDS YP_001431220.1 156741091 5538569 complement(1427801..1428739) 1 NC_009767.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rrs:RoseRS_3778 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 1428739 mraW 5538569 mraW Roseiflexus castenholzii DSM 13941 S-adenosyl-methyltransferase MraW YP_001431220.1 1427801 R 383372 CDS YP_001431221.1 156741092 5538570 complement(1429947..1430378) 1 NC_009767.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: rrs:RoseRS_3777 MraZ protein; MraZ protein 1430378 5538570 Rcas_1104 Roseiflexus castenholzii DSM 13941 MraZ protein YP_001431221.1 1429947 R 383372 CDS YP_001431222.1 156741093 5538571 1431473..1431961 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_0074 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1431961 5538571 Rcas_1105 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001431222.1 1431473 D 383372 CDS YP_001431223.1 156741094 5538572 1431882..1432316 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_0073 protein of unknown function DUF86; hypothetical protein 1432316 5538572 Rcas_1106 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431223.1 1431882 D 383372 CDS YP_001431224.1 156741095 5538573 complement(1433177..1434892) 1 NC_009767.1 SMART: AAA ATPase; KEGG: mhu:Mhun_2627 hypothetical protein; ATPase AAA 1434892 5538573 Rcas_1107 Roseiflexus castenholzii DSM 13941 ATPase AAA YP_001431224.1 1433177 R 383372 CDS YP_001431225.1 156741096 5538574 complement(1435000..1435206) 1 NC_009767.1 hypothetical protein 1435206 5538574 Rcas_1108 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431225.1 1435000 R 383372 CDS YP_001431226.1 156741097 5538575 complement(1435571..1436737) 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_3775 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 1436737 5538575 Rcas_1109 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001431226.1 1435571 R 383372 CDS YP_001431227.1 156741098 5538576 1437043..1439859 1 NC_009767.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_3774 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 1439859 5538576 Rcas_1110 Roseiflexus castenholzii DSM 13941 heavy metal translocating P-type ATPase YP_001431227.1 1437043 D 383372 CDS YP_001431228.1 156741099 5538577 1439991..1440476 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3773 NUDIX hydrolase; NUDIX hydrolase 1440476 5538577 Rcas_1111 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001431228.1 1439991 D 383372 CDS YP_001431229.1 156741100 5538578 1440473..1441066 1 NC_009767.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1441066 ruvA 5538578 ruvA Roseiflexus castenholzii DSM 13941 Holliday junction DNA helicase RuvA YP_001431229.1 1440473 D 383372 CDS YP_001431230.1 156741101 5538579 1441202..1444330 1 NC_009767.1 KEGG: rrs:RoseRS_3771 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 1444330 5538579 Rcas_1113 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001431230.1 1441202 D 383372 CDS YP_001431231.1 156741102 5538580 1444327..1445502 1 NC_009767.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_3770 response regulator receiver protein; response regulator receiver modulated serine phosphatase 1445502 5538580 Rcas_1114 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated serine phosphatase YP_001431231.1 1444327 D 383372 CDS YP_001431232.1 156741103 5538581 1446961..1449102 1 NC_009767.1 KEGG: rrs:RoseRS_3769 hypothetical protein; hypothetical protein 1449102 5538581 Rcas_1115 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431232.1 1446961 D 383372 CDS YP_001431233.1 156741104 5538582 1449102..1451177 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3768 cellulose synthase (UDP-forming); cellulose synthase 1451177 5538582 Rcas_1116 Roseiflexus castenholzii DSM 13941 cellulose synthase YP_001431233.1 1449102 D 383372 CDS YP_001431234.1 156741105 5538583 1451898..1452251 1 NC_009767.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3767 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1452251 5538583 Rcas_1117 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001431234.1 1451898 D 383372 CDS YP_001431235.1 156741106 5538584 1452241..1452681 1 NC_009767.1 KEGG: rrs:RoseRS_3766 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 1452681 5538584 Rcas_1118 Roseiflexus castenholzii DSM 13941 anti-sigma regulatory factor YP_001431235.1 1452241 D 383372 CDS YP_001431236.1 156741107 5538585 1452778..1453563 1 NC_009767.1 KEGG: rrs:RoseRS_3765 hypothetical protein; hypothetical protein 1453563 5538585 Rcas_1119 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431236.1 1452778 D 383372 CDS YP_001431237.1 156741108 5538586 1453563..1454258 1 NC_009767.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3764 haloacid dehalogenase domain protein hydrolase; hydrolase 1454258 5538586 Rcas_1120 Roseiflexus castenholzii DSM 13941 hydrolase YP_001431237.1 1453563 D 383372 CDS YP_001431238.1 156741109 5538587 complement(1454375..1454533) 1 NC_009767.1 PFAM: Flp/Fap pilin component; KEGG: drm:Dred_2110 Flp/Fap pilin component; Flp/Fap pilin component 1454533 5538587 Rcas_1121 Roseiflexus castenholzii DSM 13941 Flp/Fap pilin component YP_001431238.1 1454375 R 383372 CDS YP_001431239.1 156741110 5538588 complement(1454781..1455854) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_3762 histidine kinase; histidine kinase 1455854 5538588 Rcas_1122 Roseiflexus castenholzii DSM 13941 histidine kinase YP_001431239.1 1454781 R 383372 CDS YP_001431240.1 156741111 5538589 complement(1455921..1456676) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3761 glycosyl transferase, family 2; glycosyl transferase family protein 1456676 5538589 Rcas_1123 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431240.1 1455921 R 383372 CDS YP_001431241.1 156741112 5538590 1456767..1458326 1 NC_009767.1 KEGG: rrs:RoseRS_3760 hypothetical protein; hypothetical protein 1458326 5538590 Rcas_1124 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431241.1 1456767 D 383372 CDS YP_001431242.1 156741113 5538591 1458337..1459848 1 NC_009767.1 KEGG: rrs:RoseRS_3759 hypothetical protein; hypothetical protein 1459848 5538591 Rcas_1125 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431242.1 1458337 D 383372 CDS YP_001431243.1 156741114 5538592 complement(1459861..1461105) 1 NC_009767.1 PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_3757 protein of unknown function DUF214; hypothetical protein 1461105 5538592 Rcas_1126 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431243.1 1459861 R 383372 CDS YP_001431244.1 156741115 5538593 complement(1461662..1462597) 1 NC_009767.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: rrs:RoseRS_3756 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 1462597 5538593 Rcas_1127 Roseiflexus castenholzii DSM 13941 riboflavin biosynthesis protein RibF YP_001431244.1 1461662 R 383372 CDS YP_001431245.1 156741116 5538594 complement(1462594..1463487) 1 NC_009767.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; KEGG: rrs:RoseRS_3755 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 1463487 5538594 Rcas_1128 Roseiflexus castenholzii DSM 13941 tRNA pseudouridine synthase B YP_001431245.1 1462594 R 383372 CDS YP_001431246.1 156741117 5538595 complement(1463760..1464761) 1 NC_009767.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rrs:RoseRS_3754 phosphoesterase, RecJ domain protein; phosphoesterase domain-containing protein 1464761 5538595 Rcas_1129 Roseiflexus castenholzii DSM 13941 phosphoesterase domain-containing protein YP_001431246.1 1463760 R 383372 CDS YP_001431247.1 156741118 5538596 complement(1464758..1465354) 1 NC_009767.1 PFAM: methyltransferase small; KEGG: rrs:RoseRS_3753 methyltransferase small; methyltransferase small 1465354 5538596 Rcas_1130 Roseiflexus castenholzii DSM 13941 methyltransferase small YP_001431247.1 1464758 R 383372 CDS YP_001431248.1 156741119 5538597 complement(1465394..1465786) 1 NC_009767.1 PFAM: ribosome-binding factor A; KEGG: rrs:RoseRS_3752 ribosome-binding factor A; ribosome-binding factor A 1465786 5538597 Rcas_1131 Roseiflexus castenholzii DSM 13941 ribosome-binding factor A YP_001431248.1 1465394 R 383372 CDS YP_001431249.1 156741120 5538598 complement(1465783..1467999) 1 NC_009767.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1467999 infB 5538598 infB Roseiflexus castenholzii DSM 13941 translation initiation factor IF-2 YP_001431249.1 1465783 R 383372 CDS YP_001431250.1 156741121 5538599 complement(1468116..1468430) 1 NC_009767.1 PFAM: protein of unknown function DUF448; KEGG: rrs:RoseRS_3750 protein of unknown function DUF448; hypothetical protein 1468430 5538599 Rcas_1133 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431250.1 1468116 R 383372 CDS YP_001431251.1 156741122 5538600 complement(1468453..1469781) 1 NC_009767.1 KEGG: rrs:RoseRS_3749 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; NusA antitermination factor 1469781 5538600 Rcas_1134 Roseiflexus castenholzii DSM 13941 NusA antitermination factor YP_001431251.1 1468453 R 383372 CDS YP_001431252.1 156741123 5538601 1470415..1471932 1 NC_009767.1 KEGG: rrs:RoseRS_3748 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; Mg chelatase subunit ChlI 1471932 5538601 Rcas_1135 Roseiflexus castenholzii DSM 13941 Mg chelatase subunit ChlI YP_001431252.1 1470415 D 383372 CDS YP_001431253.1 156741124 5538603 complement(1473100..1474083) 1 NC_009767.1 TIGRFAM: Quinone oxidoreductase PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3745 alcohol dehydrogenase, zinc-binding domain protein; quinone oxidoreductase PIG3 1474083 5538603 Rcas_1137 Roseiflexus castenholzii DSM 13941 quinone oxidoreductase PIG3 YP_001431253.1 1473100 R 383372 CDS YP_001431254.1 156741125 5538604 complement(1474080..1475144) 1 NC_009767.1 PFAM: Ribosomal small subunit Rsm22; KEGG: rrs:RoseRS_3744 rRNA methylase-like protein; ribosomal small subunit Rsm22 1475144 5538604 Rcas_1138 Roseiflexus castenholzii DSM 13941 ribosomal small subunit Rsm22 YP_001431254.1 1474080 R 383372 CDS YP_001431255.1 156741126 5538605 1475304..1475741 1 NC_009767.1 KEGG: rrs:RoseRS_3418 hypothetical protein; hypothetical protein 1475741 5538605 Rcas_1139 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431255.1 1475304 D 383372 CDS YP_001431256.1 156741127 5538607 1478382..1479719 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_3420 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1479719 5538607 Rcas_1141 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001431256.1 1478382 D 383372 CDS YP_001431257.1 156741128 5538608 1479694..1480362 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3421 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1480362 5538608 Rcas_1142 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001431257.1 1479694 D 383372 CDS YP_001431258.1 156741129 5538609 complement(1480452..1480958) 1 NC_009767.1 KEGG: fra:Francci3_4119 hypothetical protein; hypothetical protein 1480958 5538609 Rcas_1143 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431258.1 1480452 R 383372 CDS YP_001431259.1 156741130 5538610 complement(1480963..1481553) 1 NC_009767.1 PFAM: protein of unknown function DUF218; KEGG: rrs:RoseRS_3427 protein of unknown function DUF218; hypothetical protein 1481553 5538610 Rcas_1144 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431259.1 1480963 R 383372 CDS YP_001431260.1 156741131 5538611 1481812..1482495 1 NC_009767.1 PFAM: LmbE family protein; KEGG: rrs:RoseRS_3428 LmbE family protein; LmbE family protein 1482495 5538611 Rcas_1145 Roseiflexus castenholzii DSM 13941 LmbE family protein YP_001431260.1 1481812 D 383372 CDS YP_001431261.1 156741132 5538612 complement(1482499..1483701) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_3429 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1483701 5538612 Rcas_1146 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001431261.1 1482499 R 383372 CDS YP_001431262.1 156741133 5538613 complement(1483858..1485153) 1 NC_009767.1 PFAM: peptidase M16 domain protein; KEGG: rrs:RoseRS_0397 peptidase M16 domain protein; peptidase M16 domain-containing protein 1485153 5538613 Rcas_1147 Roseiflexus castenholzii DSM 13941 peptidase M16 domain-containing protein YP_001431262.1 1483858 R 383372 CDS YP_001431263.1 156741134 5538614 1485289..1486959 1 NC_009767.1 KEGG: rrs:RoseRS_0396 hypothetical protein; hypothetical protein 1486959 5538614 Rcas_1148 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431263.1 1485289 D 383372 CDS YP_001431264.1 156741135 5538615 1487338..1487589 1 NC_009767.1 KEGG: rrs:RoseRS_0395 hypothetical protein; hypothetical protein 1487589 5538615 Rcas_1149 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431264.1 1487338 D 383372 CDS YP_001431265.1 156741136 5538616 1487835..1489880 1 NC_009767.1 PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_0394 glycosyl transferase, family 39; glycosyl transferase family protein 1489880 5538616 Rcas_1150 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431265.1 1487835 D 383372 CDS YP_001431266.1 156741137 5538617 complement(1489867..1490730) 1 NC_009767.1 KEGG: rrs:RoseRS_0393 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 1490730 5538617 Rcas_1151 Roseiflexus castenholzii DSM 13941 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_001431266.1 1489867 R 383372 CDS YP_001431267.1 156741138 5538618 complement(1490744..1491640) 1 NC_009767.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rrs:RoseRS_0392 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1491640 5538618 Rcas_1152 Roseiflexus castenholzii DSM 13941 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001431267.1 1490744 R 383372 CDS YP_001431268.1 156741139 5538619 1491857..1493386 1 NC_009767.1 PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rrs:RoseRS_0391 SH3, type 3 domain protein; SH3 type 3 domain-containing protein 1493386 5538619 Rcas_1153 Roseiflexus castenholzii DSM 13941 SH3 type 3 domain-containing protein YP_001431268.1 1491857 D 383372 CDS YP_001431269.1 156741140 5538620 complement(1493524..1494342) 1 NC_009767.1 KEGG: rrs:RoseRS_0390 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 1494342 5538620 Rcas_1154 Roseiflexus castenholzii DSM 13941 pyrroline-5-carboxylate reductase YP_001431269.1 1493524 R 383372 CDS YP_001431270.1 156741141 5538621 complement(1494384..1495694) 1 NC_009767.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1495694 glyA 5538621 glyA Roseiflexus castenholzii DSM 13941 serine hydroxymethyltransferase YP_001431270.1 1494384 R 383372 CDS YP_001431271.1 156741142 5538622 1495867..1496676 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0388 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1496676 5538622 Rcas_1156 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001431271.1 1495867 D 383372 CDS YP_001431272.1 156741143 5538623 1496872..1497870 1 NC_009767.1 PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: rrs:RoseRS_0387 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); glyceraldehyde-3-phosphate dehydrogenase 1497870 5538623 Rcas_1157 Roseiflexus castenholzii DSM 13941 glyceraldehyde-3-phosphate dehydrogenase YP_001431272.1 1496872 D 383372 CDS YP_001431273.1 156741144 5538624 1499938..1501149 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_0386 glycosyl transferase, family 2; glycosyl transferase family protein 1501149 5538624 Rcas_1158 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431273.1 1499938 D 383372 CDS YP_001431274.1 156741145 5538625 complement(1501153..1503150) 1 NC_009767.1 KEGG: rrs:RoseRS_0383 hypothetical protein; hypothetical protein 1503150 5538625 Rcas_1159 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431274.1 1501153 R 383372 CDS YP_001431275.1 156741146 5538626 complement(1503436..1504506) 1 NC_009767.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: rrs:RoseRS_0382 myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase 1504506 5538626 Rcas_1160 Roseiflexus castenholzii DSM 13941 myo-inositol-1-phosphate synthase YP_001431275.1 1503436 R 383372 CDS YP_001431276.1 156741147 5538627 complement(1505758..1508658) 1 NC_009767.1 KEGG: rrs:RoseRS_0585 hypothetical protein; hypothetical protein 1508658 5538627 Rcas_1161 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431276.1 1505758 R 383372 CDS YP_001431277.1 156741148 5538628 complement(1508990..1509763) 1 NC_009767.1 PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_0588 beta-lactamase domain protein; beta-lactamase domain-containing protein 1509763 5538628 Rcas_1162 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001431277.1 1508990 R 383372 CDS YP_001431278.1 156741149 5538629 1510131..1511108 1 NC_009767.1 KEGG: rrs:RoseRS_0589 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1511108 5538629 Rcas_1163 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor-containing diguanylate cyclase YP_001431278.1 1510131 D 383372 CDS YP_001431279.1 156741150 5538630 1511096..1511371 1 NC_009767.1 hypothetical protein 1511371 5538630 Rcas_1164 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431279.1 1511096 D 383372 CDS YP_001431280.1 156741151 5538631 1511676..1512863 1 NC_009767.1 PFAM: protein of unknown function DUF111; KEGG: rrs:RoseRS_0590 protein of unknown function DUF111; hypothetical protein 1512863 5538631 Rcas_1165 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431280.1 1511676 D 383372 CDS YP_001431281.1 156741152 5538632 complement(1512926..1513333) 1 NC_009767.1 KEGG: mta:Moth_2011 PilT protein-like; twitching motility protein PilT 1513333 5538632 Rcas_1166 Roseiflexus castenholzii DSM 13941 twitching motility protein PilT YP_001431281.1 1512926 R 383372 CDS YP_001431282.1 156741153 5538633 complement(1513284..1513556) 1 NC_009767.1 KEGG: gvi:gll1697 unknown protein; hypothetical protein 1513556 5538633 Rcas_1167 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431282.1 1513284 R 383372 CDS YP_001431283.1 156741154 5538634 complement(1514043..1514276) 1 NC_009767.1 TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 1514276 5538634 Rcas_1168 Roseiflexus castenholzii DSM 13941 prevent-host-death family protein YP_001431283.1 1514043 R 383372 CDS YP_001431284.1 156741155 5538635 complement(1514273..1514671) 1 NC_009767.1 PFAM: PilT protein domain protein; KEGG: rrs:RoseRS_0930 PilT protein domain protein; twitching motility protein PilT 1514671 5538635 Rcas_1169 Roseiflexus castenholzii DSM 13941 twitching motility protein PilT YP_001431284.1 1514273 R 383372 CDS YP_001431285.1 156741156 5538636 1514865..1514996 1 NC_009767.1 KEGG: rrs:RoseRS_4283 prevent-host-death family protein; prevent-host-death family protein 1514996 5538636 Rcas_1170 Roseiflexus castenholzii DSM 13941 prevent-host-death family protein YP_001431285.1 1514865 D 383372 CDS YP_001431286.1 156741157 5538637 1515339..1516283 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_4284 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 1516283 5538637 Rcas_1171 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001431286.1 1515339 D 383372 CDS YP_001431287.1 156741158 5538638 complement(1516937..1517809) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0801 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1517809 5538638 Rcas_1172 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001431287.1 1516937 R 383372 CDS YP_001431288.1 156741159 5538639 complement(1517806..1518798) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0802 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1518798 5538639 Rcas_1173 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport systems inner membrane component YP_001431288.1 1517806 R 383372 CDS YP_001431289.1 156741160 5538640 complement(1518896..1520263) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_0803 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1520263 5538640 Rcas_1174 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001431289.1 1518896 R 383372 CDS YP_001431290.1 156741161 5538641 complement(1520706..1521785) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0804 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1521785 5538641 Rcas_1175 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001431290.1 1520706 R 383372 CDS YP_001431291.1 156741162 5538642 complement(1521790..1522479) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0805 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1522479 5538642 Rcas_1176 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001431291.1 1521790 R 383372 CDS YP_001431292.1 156741163 5538643 complement(1522476..1522985) 1 NC_009767.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rrs:RoseRS_0806 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase 1522985 5538643 Rcas_1177 Roseiflexus castenholzii DSM 13941 alkylhydroperoxidase YP_001431292.1 1522476 R 383372 CDS YP_001431293.1 156741164 5538644 complement(1523089..1523649) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0807 methyltransferase type 11; type 11 methyltransferase 1523649 5538644 Rcas_1178 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001431293.1 1523089 R 383372 CDS YP_001431294.1 156741165 5538645 1523782..1524777 1 NC_009767.1 PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_0808 radical SAM domain protein; radical SAM domain-containing protein 1524777 5538645 Rcas_1179 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001431294.1 1523782 D 383372 CDS YP_001431295.1 156741166 5538646 1524913..1525083 1 NC_009767.1 KEGG: rrs:RoseRS_0809 protein of unknown function DUF59; hypothetical protein 1525083 5538646 Rcas_1180 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431295.1 1524913 D 383372 CDS YP_001431296.1 156741167 5538647 1525107..1525811 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0810 ABC transporter related; ABC transporter-like protein 1525811 5538647 Rcas_1181 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431296.1 1525107 D 383372 CDS YP_001431297.1 156741168 5538648 1525820..1526815 1 NC_009767.1 PFAM: SufBD protein; KEGG: rrs:RoseRS_0811 SufBD protein; SufBD protein 1526815 5538648 Rcas_1182 Roseiflexus castenholzii DSM 13941 SufBD protein YP_001431297.1 1525820 D 383372 CDS YP_001431298.1 156741169 5538649 complement(1527027..1528784) 1 NC_009767.1 TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: rrs:RoseRS_0812 sulfate transporter; sulfate transporter 1528784 5538649 Rcas_1183 Roseiflexus castenholzii DSM 13941 sulfate transporter YP_001431298.1 1527027 R 383372 CDS YP_001431299.1 156741170 5538650 complement(1528805..1529302) 1 NC_009767.1 PFAM: protein of unknown function DUF442; KEGG: rrs:RoseRS_0813 protein of unknown function DUF442; hypothetical protein 1529302 5538650 Rcas_1184 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431299.1 1528805 R 383372 CDS YP_001431300.1 156741171 5538651 complement(1529321..1529899) 1 NC_009767.1 KEGG: rrs:RoseRS_0814 hypothetical protein; hypothetical protein 1529899 5538651 Rcas_1185 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431300.1 1529321 R 383372 CDS YP_001431301.1 156741172 5538652 complement(1530306..1530557) 1 NC_009767.1 PFAM: SirA family protein; KEGG: rrs:RoseRS_0815 SirA family protein; SirA family protein 1530557 5538652 Rcas_1186 Roseiflexus castenholzii DSM 13941 SirA family protein YP_001431301.1 1530306 R 383372 CDS YP_001431302.1 156741173 5538653 complement(1530756..1531937) 1 NC_009767.1 PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rrs:RoseRS_0816 beta-lactamase domain protein; beta-lactamase domain-containing protein 1531937 5538653 Rcas_1187 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001431302.1 1530756 R 383372 CDS YP_001431303.1 156741174 5538654 1532934..1533989 1 NC_009767.1 KEGG: rrs:RoseRS_4471 hypothetical protein; hypothetical protein 1533989 5538654 Rcas_1188 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431303.1 1532934 D 383372 CDS YP_001431304.1 156741175 5538655 complement(1534178..1534915) 1 NC_009767.1 PFAM: ribonuclease H; KEGG: sat:SYN_00291 ribonuclease H; ribonuclease H 1534915 5538655 Rcas_1189 Roseiflexus castenholzii DSM 13941 ribonuclease H YP_001431304.1 1534178 R 383372 CDS YP_001431305.1 156741176 5538656 complement(1535452..1536522) 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_0817 oxidoreductase domain protein; oxidoreductase domain-containing protein 1536522 5538656 Rcas_1190 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001431305.1 1535452 R 383372 CDS YP_001431306.1 156741177 5538657 complement(1536652..1536810) 1 NC_009767.1 hypothetical protein 1536810 5538657 Rcas_1191 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431306.1 1536652 R 383372 CDS YP_001431307.1 156741178 5538658 1536916..1538418 1 NC_009767.1 PFAM: Ppx/GppA phosphatase; KEGG: rrs:RoseRS_0819 Ppx/GppA phosphatase; Ppx/GppA phosphatase 1538418 5538658 Rcas_1192 Roseiflexus castenholzii DSM 13941 Ppx/GppA phosphatase YP_001431307.1 1536916 D 383372 CDS YP_001431308.1 156741179 5538659 complement(1538608..1541028) 1 NC_009767.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rrs:RoseRS_0820 cell divisionFtsK/SpoIIIE; cell division protein FtsK 1541028 5538659 Rcas_1193 Roseiflexus castenholzii DSM 13941 cell division protein FtsK YP_001431308.1 1538608 R 383372 CDS YP_001431309.1 156741180 5538660 1543066..1543416 1 NC_009767.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2160 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1543416 5538660 Rcas_1194 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001431309.1 1543066 D 383372 CDS YP_001431310.1 156741181 5538661 1543595..1544404 1 NC_009767.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_2161 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1544404 5538661 Rcas_1195 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001431310.1 1543595 D 383372 CDS YP_001431311.1 156741182 5538662 1544401..1547415 1 NC_009767.1 PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2162 protein serine phosphatase with GAF(s) sensor(s); GAF sensor-containing protein serine phosphatase 1547415 5538662 Rcas_1196 Roseiflexus castenholzii DSM 13941 GAF sensor-containing protein serine phosphatase YP_001431311.1 1544401 D 383372 CDS YP_001431312.1 156741183 5538663 1547478..1547987 1 NC_009767.1 PFAM: PHA accumulation regulator DNA-binding protein; KEGG: rrs:RoseRS_2163 PHA accumulation regulator DNA-binding protein; PHA accumulation regulator DNA-binding protein 1547987 5538663 Rcas_1197 Roseiflexus castenholzii DSM 13941 PHA accumulation regulator DNA-binding protein YP_001431312.1 1547478 D 383372 CDS YP_001431313.1 156741184 5538664 1548155..1549339 1 NC_009767.1 PFAM: Patatin; KEGG: rrs:RoseRS_2164 patatin; patatin 1549339 5538664 Rcas_1198 Roseiflexus castenholzii DSM 13941 patatin YP_001431313.1 1548155 D 383372 CDS YP_001431314.1 156741185 5538665 complement(1549662..1550402) 1 NC_009767.1 KEGG: rrs:RoseRS_4071 hypothetical protein; hypothetical protein 1550402 5538665 Rcas_1199 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431314.1 1549662 R 383372 CDS YP_001431315.1 156741186 5538666 complement(1550416..1552893) 1 NC_009767.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_4070 ATPase AAA-2 domain protein; ATPase 1552893 5538666 Rcas_1200 Roseiflexus castenholzii DSM 13941 ATPase YP_001431315.1 1550416 R 383372 CDS YP_001431316.1 156741187 5538667 1553794..1554249 1 NC_009767.1 KEGG: rrs:RoseRS_4069 hypothetical protein; hypothetical protein 1554249 5538667 Rcas_1201 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431316.1 1553794 D 383372 CDS YP_001431317.1 156741188 5538668 complement(1554321..1555082) 1 NC_009767.1 PFAM: protein of unknown function DUF124; KEGG: rrs:RoseRS_4068 protein of unknown function DUF124; hypothetical protein 1555082 5538668 Rcas_1202 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431317.1 1554321 R 383372 CDS YP_001431318.1 156741189 5538669 complement(1555648..1557513) 1 NC_009767.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_4067 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1557513 5538669 Rcas_1203 Roseiflexus castenholzii DSM 13941 RND family efflux transporter MFP subunit YP_001431318.1 1555648 R 383372 CDS YP_001431319.1 156741190 5538670 complement(1557522..1558484) 1 NC_009767.1 PFAM: ferrochelatase; KEGG: rrs:RoseRS_4065 ferrochelatase; ferrochelatase 1558484 5538670 Rcas_1204 Roseiflexus castenholzii DSM 13941 ferrochelatase YP_001431319.1 1557522 R 383372 CDS YP_001431320.1 156741191 5538671 complement(1558695..1560560) 1 NC_009767.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: rrs:RoseRS_4064 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase 1560560 5538671 Rcas_1205 Roseiflexus castenholzii DSM 13941 glucosamine--fructose-6-phosphate aminotransferase YP_001431320.1 1558695 R 383372 CDS YP_001431321.1 156741192 5538672 complement(1560610..1560972) 1 NC_009767.1 hypothetical protein 1560972 5538672 Rcas_1206 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431321.1 1560610 R 383372 CDS YP_001431322.1 156741193 5538673 complement(1561196..1561513) 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: cph:Cpha266_0292 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1561513 5538673 Rcas_1207 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001431322.1 1561196 R 383372 CDS YP_001431323.1 156741194 5538674 complement(1561510..1561932) 1 NC_009767.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: cph:Cpha266_0291 nucleotidyltransferase substrate binding protein, HI0074 family; nucleotidyltransferase substrate-binding protein 1561932 5538674 Rcas_1208 Roseiflexus castenholzii DSM 13941 nucleotidyltransferase substrate-binding protein YP_001431323.1 1561510 R 383372 CDS YP_001431324.1 156741195 5538675 1562359..1563546 1 NC_009767.1 PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_4133 aminotransferase, class I and II; class I/II aminotransferase 1563546 5538675 Rcas_1209 Roseiflexus castenholzii DSM 13941 class I/II aminotransferase YP_001431324.1 1562359 D 383372 CDS YP_001431325.1 156741196 5538676 1563647..1564837 1 NC_009767.1 PFAM: Monogalactosyldiacylglycerol synthase; KEGG: rrs:RoseRS_4132 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 1564837 5538676 Rcas_1210 Roseiflexus castenholzii DSM 13941 monogalactosyldiacylglycerol synthase YP_001431325.1 1563647 D 383372 CDS YP_001431326.1 156741197 5538677 complement(1564948..1566579) 1 NC_009767.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: rrs:RoseRS_4131 chaperonin GroEL; chaperonin GroEL 1566579 5538677 Rcas_1211 Roseiflexus castenholzii DSM 13941 chaperonin GroEL YP_001431326.1 1564948 R 383372 CDS YP_001431327.1 156741198 5538678 complement(1566640..1566945) 1 NC_009767.1 PFAM: chaperonin Cpn10; KEGG: rrs:RoseRS_4130 chaperonin Cpn10; chaperonin Cpn10 1566945 5538678 Rcas_1212 Roseiflexus castenholzii DSM 13941 chaperonin Cpn10 YP_001431327.1 1566640 R 383372 CDS YP_001431328.1 156741199 5538679 1567225..1568214 1 NC_009767.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 1568214 glpX 5538679 glpX Roseiflexus castenholzii DSM 13941 fructose 1,6-bisphosphatase II YP_001431328.1 1567225 D 383372 CDS YP_001431329.1 156741200 5538680 complement(1568232..1569299) 1 NC_009767.1 TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_4128 glucose-1-phosphate thymidyltransferase; glucose-1-phosphate thymidylyltransferase 1569299 5538680 Rcas_1214 Roseiflexus castenholzii DSM 13941 glucose-1-phosphate thymidylyltransferase YP_001431329.1 1568232 R 383372 CDS YP_001431330.1 156741201 5538681 complement(1569455..1571053) 1 NC_009767.1 PFAM: NLP/P60 protein; protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rrs:RoseRS_4127 NLP/P60 protein; NLP/P60 protein 1571053 5538681 Rcas_1215 Roseiflexus castenholzii DSM 13941 NLP/P60 protein YP_001431330.1 1569455 R 383372 CDS YP_001431331.1 156741202 5538682 complement(1571309..1572022) 1 NC_009767.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rrs:RoseRS_4126 glycerophosphodiester phosphodiesterase; glycerophosphodiester phosphodiesterase 1572022 5538682 Rcas_1216 Roseiflexus castenholzii DSM 13941 glycerophosphodiester phosphodiesterase YP_001431331.1 1571309 R 383372 CDS YP_001431332.1 156741203 5538683 complement(1572092..1572634) 1 NC_009767.1 PFAM: zinc finger SWIM domain protein; KEGG: rrs:RoseRS_4125 zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein 1572634 5538683 Rcas_1217 Roseiflexus castenholzii DSM 13941 zinc finger SWIM domain-containing protein YP_001431332.1 1572092 R 383372 CDS YP_001431333.1 156741204 5538685 complement(1573264..1574610) 1 NC_009767.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rrs:RoseRS_4124 phosphomannomutase; phosphomannomutase 1574610 5538685 Rcas_1218 Roseiflexus castenholzii DSM 13941 phosphomannomutase YP_001431333.1 1573264 R 383372 CDS YP_001431334.1 156741205 5538686 complement(1575211..1577526) 1 NC_009767.1 KEGG: rrs:RoseRS_4122 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 1577526 5538686 Rcas_1219 Roseiflexus castenholzii DSM 13941 (p)ppGpp synthetase I SpoT/RelA YP_001431334.1 1575211 R 383372 CDS YP_001431335.1 156741206 5538687 complement(1577621..1578862) 1 NC_009767.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rrs:RoseRS_4121 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1578862 5538687 Rcas_1220 Roseiflexus castenholzii DSM 13941 ErfK/YbiS/YcfS/YnhG family protein YP_001431335.1 1577621 R 383372 CDS YP_001431336.1 156741207 5538688 1579478..1579972 1 NC_009767.1 PFAM: PilT protein domain protein; KEGG: mhu:Mhun_2151 PilT protein-like; twitching motility protein PilT 1579972 5538688 Rcas_1221 Roseiflexus castenholzii DSM 13941 twitching motility protein PilT YP_001431336.1 1579478 D 383372 CDS YP_001431337.1 156741208 5538689 complement(1579902..1581395) 1 NC_009767.1 PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_0829 aldehyde dehydrogenase; aldehyde dehydrogenase 1581395 5538689 Rcas_1222 Roseiflexus castenholzii DSM 13941 aldehyde dehydrogenase YP_001431337.1 1579902 R 383372 CDS YP_001431338.1 156741209 5538690 1581662..1582540 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pau:PA14_32880 hypothetical protein; type 12 methyltransferase 1582540 5538690 Rcas_1223 Roseiflexus castenholzii DSM 13941 type 12 methyltransferase YP_001431338.1 1581662 D 383372 CDS YP_001431339.1 156741210 5538691 complement(1582596..1583795) 1 NC_009767.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_0842 acetylornithine and succinylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 1583795 5538691 Rcas_1224 Roseiflexus castenholzii DSM 13941 acetylornithine and succinylornithine aminotransferase YP_001431339.1 1582596 R 383372 CDS YP_001431340.1 156741211 5538692 1583941..1584282 1 NC_009767.1 hypothetical protein 1584282 5538692 Rcas_1225 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431340.1 1583941 D 383372 CDS YP_001431341.1 156741212 5538693 complement(1584336..1586153) 1 NC_009767.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rrs:RoseRS_0843 5'-nucleotidase domain protein; 5'-nucleotidase domain-containing protein 1586153 5538693 Rcas_1226 Roseiflexus castenholzii DSM 13941 5'-nucleotidase domain-containing protein YP_001431341.1 1584336 R 383372 CDS YP_001431342.1 156741213 5538696 1586602..1587204 1 NC_009767.1 KEGG: rrs:RoseRS_0591 hypothetical protein; hypothetical protein 1587204 5538696 Rcas_1227 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431342.1 1586602 D 383372 CDS YP_001431343.1 156741214 5538697 complement(1587281..1587895) 1 NC_009767.1 PFAM: regulatory protein LuxR; KEGG: rrs:RoseRS_0799 response regulator receiver protein; LuxR family transcriptional regulator 1587895 5538697 Rcas_1228 Roseiflexus castenholzii DSM 13941 LuxR family transcriptional regulator YP_001431343.1 1587281 R 383372 CDS YP_001431344.1 156741215 5538698 complement(1587892..1588788) 1 NC_009767.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_0798 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 1588788 5538698 Rcas_1229 Roseiflexus castenholzii DSM 13941 peptidase S1 and S6 chymotrypsin/Hap YP_001431344.1 1587892 R 383372 CDS YP_001431345.1 156741216 5538699 complement(1588789..1589700) 1 NC_009767.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_0797 PDZ/DHR/GLGF domain protein; PDZ/DHR/GLGF domain-containing protein 1589700 5538699 Rcas_1230 Roseiflexus castenholzii DSM 13941 PDZ/DHR/GLGF domain-containing protein YP_001431345.1 1588789 R 383372 CDS YP_001431346.1 156741217 5538700 1589940..1590914 1 NC_009767.1 PFAM: Acetyl xylan esterase; KEGG: rrs:RoseRS_0796 acetyl xylan esterase; Acetyl xylan esterase 1590914 5538700 Rcas_1231 Roseiflexus castenholzii DSM 13941 Acetyl xylan esterase YP_001431346.1 1589940 D 383372 CDS YP_001431347.1 156741218 5538701 complement(1591698..1592765) 1 NC_009767.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0795 ABC transporter related; ABC transporter-like protein 1592765 5538701 Rcas_1232 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431347.1 1591698 R 383372 CDS YP_001431348.1 156741219 5538702 complement(1592815..1594362) 1 NC_009767.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_0794 UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramyl tripeptide synthetase 1594362 5538702 Rcas_1233 Roseiflexus castenholzii DSM 13941 UDP-N-acetylmuramyl tripeptide synthetase YP_001431348.1 1592815 R 383372 CDS YP_001431349.1 156741220 5538703 1594635..1595879 1 NC_009767.1 KEGG: rrs:RoseRS_0793 ABC-type Fe3+ transport system periplasmic component-like protein; Fe3+ ABC transporter periplasmic component-like protein 1595879 5538703 Rcas_1234 Roseiflexus castenholzii DSM 13941 Fe3+ ABC transporter periplasmic component-like protein YP_001431349.1 1594635 D 383372 CDS YP_001431350.1 156741221 5538704 1596285..1597181 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0792 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1597181 5538704 Rcas_1235 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001431350.1 1596285 D 383372 CDS YP_001431351.1 156741222 5538705 1597184..1597963 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0791 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1597963 5538705 Rcas_1236 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001431351.1 1597184 D 383372 CDS YP_001431352.1 156741223 5538706 1597974..1599086 1 NC_009767.1 KEGG: rrs:RoseRS_0790 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1599086 5538706 Rcas_1237 Roseiflexus castenholzii DSM 13941 spermidine/putrescine ABC transporter ATPase YP_001431352.1 1597974 D 383372 CDS YP_001431353.1 156741224 5538707 complement(1599050..1600468) 1 NC_009767.1 KEGG: rrs:RoseRS_0789 phytoene dehydrogenase and related protein-like protein; phytoene dehydrogenase 1600468 5538707 Rcas_1238 Roseiflexus castenholzii DSM 13941 phytoene dehydrogenase YP_001431353.1 1599050 R 383372 CDS YP_001431354.1 156741225 5538708 1600628..1601572 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0787 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1601572 5538708 Rcas_1239 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001431354.1 1600628 D 383372 CDS YP_001431355.1 156741226 5538709 complement(1601586..1603739) 1 NC_009767.1 KEGG: rrs:RoseRS_0786 parallel beta-helix repeat; parallel beta-helix repeat-containing protein 1603739 5538709 Rcas_1240 Roseiflexus castenholzii DSM 13941 parallel beta-helix repeat-containing protein YP_001431355.1 1601586 R 383372 CDS YP_001431356.1 156741227 5538710 1603981..1605345 1 NC_009767.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rrs:RoseRS_0785 isocitrate dehydrogenase, NADP-dependent; NADP-dependent isocitrate dehydrogenase 1605345 5538710 Rcas_1241 Roseiflexus castenholzii DSM 13941 NADP-dependent isocitrate dehydrogenase YP_001431356.1 1603981 D 383372 CDS YP_001431357.1 156741228 5538711 complement(1605544..1606185) 1 NC_009767.1 PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_0784 signal-transduction protein with CBS domains; signal-transduction protein 1606185 5538711 Rcas_1242 Roseiflexus castenholzii DSM 13941 signal-transduction protein YP_001431357.1 1605544 R 383372 CDS YP_001431358.1 156741229 5538712 complement(1606274..1606675) 1 NC_009767.1 PFAM: globin; KEGG: rrs:RoseRS_0783 globin; globin 1606675 5538712 Rcas_1243 Roseiflexus castenholzii DSM 13941 globin YP_001431358.1 1606274 R 383372 CDS YP_001431359.1 156741230 5538713 complement(1606672..1607460) 1 NC_009767.1 PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; metalloenzyme domain protein; KEGG: bfs:BF3569 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 1607460 5538713 Rcas_1244 Roseiflexus castenholzii DSM 13941 type I phosphodiesterase/nucleotide pyrophosphatase YP_001431359.1 1606672 R 383372 CDS YP_001431360.1 156741231 5538714 complement(1607754..1608815) 1 NC_009767.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_0781 PBS lyase heat domain protein repeat-containing protein; PBS lyase 1608815 5538714 Rcas_1245 Roseiflexus castenholzii DSM 13941 PBS lyase YP_001431360.1 1607754 R 383372 CDS YP_001431361.1 156741232 5538718 complement(1610369..1610761) 1 NC_009767.1 KEGG: ppd:Ppro_2108 hypothetical protein; hypothetical protein 1610761 5538718 Rcas_1246 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431361.1 1610369 R 383372 CDS YP_001431362.1 156741233 5538719 1611479..1613590 1 NC_009767.1 PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_0827 glycogen debranching enzyme GlgX; glycoside hydrolase family 13 1613590 5538719 Rcas_1247 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family 13 YP_001431362.1 1611479 D 383372 CDS YP_001431363.1 156741234 5538720 complement(1614239..1614805) 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_0491 NUDIX hydrolase; NUDIX hydrolase 1614805 5538720 Rcas_1248 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001431363.1 1614239 R 383372 CDS YP_001431364.1 156741235 5538721 complement(1615082..1615351) 1 NC_009767.1 KEGG: rrs:RoseRS_0493 vitamin K epoxide reductase; hypothetical protein 1615351 5538721 Rcas_1249 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431364.1 1615082 R 383372 CDS YP_001431365.1 156741236 5538722 complement(1615551..1617383) 1 NC_009767.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0494 ABC transporter related; ABC transporter-like protein 1617383 5538722 Rcas_1250 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431365.1 1615551 R 383372 CDS YP_001431366.1 156741237 5538723 complement(1617715..1619538) 1 NC_009767.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0495 ABC transporter related; cyclic nucleotide-binding protein 1619538 5538723 Rcas_1251 Roseiflexus castenholzii DSM 13941 cyclic nucleotide-binding protein YP_001431366.1 1617715 R 383372 CDS YP_001431367.1 156741238 5538724 complement(1619834..1620949) 1 NC_009767.1 KEGG: rrs:RoseRS_0497 hypothetical protein; hypothetical protein 1620949 5538724 Rcas_1252 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431367.1 1619834 R 383372 CDS YP_001431368.1 156741239 5538725 complement(1621032..1621799) 1 NC_009767.1 TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0498 2-deoxy-D-gluconate 3-dehydrogenase; 2-deoxy-D-gluconate 3-dehydrogenase 1621799 5538725 Rcas_1253 Roseiflexus castenholzii DSM 13941 2-deoxy-D-gluconate 3-dehydrogenase YP_001431368.1 1621032 R 383372 CDS YP_001431369.1 156741240 5538726 complement(1621796..1622626) 1 NC_009767.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rrs:RoseRS_0499 myo-inositol catabolism IolB domain protein; myo-inositol catabolism IolB domain-containing protein 1622626 5538726 Rcas_1254 Roseiflexus castenholzii DSM 13941 myo-inositol catabolism IolB domain-containing protein YP_001431369.1 1621796 R 383372 CDS YP_001431370.1 156741241 5538727 complement(1623081..1624604) 1 NC_009767.1 PFAM: Mur ligase middle domain protein; domain of unknown function DUF1727; KEGG: rrs:RoseRS_0500 domain of unknown function DUF1727; hypothetical protein 1624604 5538727 Rcas_1255 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431370.1 1623081 R 383372 CDS YP_001431371.1 156741242 5538728 complement(1624620..1625366) 1 NC_009767.1 KEGG: rrs:RoseRS_0501 xanthine and CO dehydrogenase maturation factor XdhC/CoxF family-like protein; xanthine and Co dehydrogenase maturation factor 1625366 5538728 Rcas_1256 Roseiflexus castenholzii DSM 13941 xanthine and Co dehydrogenase maturation factor YP_001431371.1 1624620 R 383372 CDS YP_001431372.1 156741243 5538729 complement(1625528..1625842) 1 NC_009767.1 PFAM: protein of unknown function DUF182; KEGG: rrs:RoseRS_0502 protein of unknown function DUF182; hypothetical protein 1625842 5538729 Rcas_1257 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431372.1 1625528 R 383372 CDS YP_001431373.1 156741244 5538730 complement(1625866..1627965) 1 NC_009767.1 PFAM: Peptidoglycan-binding LysM; polysaccharide deacetylase; KEGG: rrs:RoseRS_0503 polysaccharide deacetylase; polysaccharide deacetylase 1627965 5538730 Rcas_1258 Roseiflexus castenholzii DSM 13941 polysaccharide deacetylase YP_001431373.1 1625866 R 383372 CDS YP_001431374.1 156741245 5538731 complement(1629682..1631055) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0506 glycosyl transferase, group 1; group 1 glycosyl transferase 1631055 5538731 Rcas_1259 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431374.1 1629682 R 383372 CDS YP_001431375.1 156741246 5538732 complement(1631066..1632184) 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_0507 oxidoreductase domain protein; oxidoreductase domain-containing protein 1632184 5538732 Rcas_1260 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001431375.1 1631066 R 383372 CDS YP_001431376.1 156741247 5538733 complement(1632189..1632665) 1 NC_009767.1 PFAM: protein of unknown function DUF402; KEGG: rrs:RoseRS_0508 protein of unknown function DUF402; hypothetical protein 1632665 5538733 Rcas_1261 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431376.1 1632189 R 383372 CDS YP_001431377.1 156741248 5538734 complement(1632662..1633360) 1 NC_009767.1 PFAM: Methyltransferase type 11; KEGG: rrs:RoseRS_0509 methyltransferase type 11; type 11 methyltransferase 1633360 5538734 Rcas_1262 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001431377.1 1632662 R 383372 CDS YP_001431378.1 156741249 5538735 complement(1633431..1634441) 1 NC_009767.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: rrs:RoseRS_0510 cell shape determining protein, MreB/Mrl family; rod shape-determining protein MreB 1634441 5538735 Rcas_1263 Roseiflexus castenholzii DSM 13941 rod shape-determining protein MreB YP_001431378.1 1633431 R 383372 CDS YP_001431379.1 156741250 5538736 complement(1634607..1635026) 1 NC_009767.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 1635026 atpC 5538736 atpC Roseiflexus castenholzii DSM 13941 F0F1 ATP synthase subunit epsilon YP_001431379.1 1634607 R 383372 CDS YP_001431380.1 156741251 5538737 complement(1635033..1636448) 1 NC_009767.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 1636448 5538737 Rcas_1265 Roseiflexus castenholzii DSM 13941 F0F1 ATP synthase subunit beta YP_001431380.1 1635033 R 383372 CDS YP_001431381.1 156741252 5538738 complement(1636476..1637348) 1 NC_009767.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 1637348 5538738 Rcas_1266 Roseiflexus castenholzii DSM 13941 F0F1 ATP synthase subunit gamma YP_001431381.1 1636476 R 383372 CDS YP_001431382.1 156741253 5538739 complement(1637561..1639141) 1 NC_009767.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 1639141 5538739 Rcas_1267 Roseiflexus castenholzii DSM 13941 F0F1 ATP synthase subunit alpha YP_001431382.1 1637561 R 383372 CDS YP_001431383.1 156741254 5538740 complement(1639184..1639660) 1 NC_009767.1 PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: rrs:RoseRS_0515 H+-transporting two-sector ATPase, delta (OSCP) subunit; H+-transporting two-sector ATPase subunit delta 1639660 5538740 Rcas_1268 Roseiflexus castenholzii DSM 13941 H+-transporting two-sector ATPase subunit delta YP_001431383.1 1639184 R 383372 CDS YP_001431384.1 156741255 5538741 complement(1639713..1640204) 1 NC_009767.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 1640204 5538741 Rcas_1269 Roseiflexus castenholzii DSM 13941 F0F1 ATP synthase subunit B YP_001431384.1 1639713 R 383372 CDS YP_001431385.1 156741256 5538742 complement(1640236..1640469) 1 NC_009767.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: rrs:RoseRS_0517 ATP synthase F0, C subunit; ATP synthase F0 subunit C 1640469 5538742 Rcas_1270 Roseiflexus castenholzii DSM 13941 ATP synthase F0 subunit C YP_001431385.1 1640236 R 383372 CDS YP_001431386.1 156741257 5538743 complement(1640560..1641555) 1 NC_009767.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: rrs:RoseRS_0518 ATP synthase F0, A subunit; ATP synthase F0 subunit A 1641555 5538743 Rcas_1271 Roseiflexus castenholzii DSM 13941 ATP synthase F0 subunit A YP_001431386.1 1640560 R 383372 CDS YP_001431387.1 156741258 5538744 complement(1641724..1642692) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_0519 response regulator receiver protein; response regulator receiver protein 1642692 5538744 Rcas_1272 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001431387.1 1641724 R 383372 CDS YP_001431388.1 156741259 5538745 complement(1642715..1644385) 1 NC_009767.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0520 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 1644385 5538745 Rcas_1273 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001431388.1 1642715 R 383372 CDS YP_001431389.1 156741260 5538746 complement(1644402..1645547) 1 NC_009767.1 KEGG: rrs:RoseRS_0521 hypothetical protein; hypothetical protein 1645547 5538746 Rcas_1274 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431389.1 1644402 R 383372 CDS YP_001431390.1 156741261 5538747 1646277..1646786 1 NC_009767.1 PFAM: PspC domain protein; KEGG: rrs:RoseRS_0522 phage shock protein C, PspC; phage shock protein PspC 1646786 5538747 Rcas_1275 Roseiflexus castenholzii DSM 13941 phage shock protein PspC YP_001431390.1 1646277 D 383372 CDS YP_001431391.1 156741262 5538748 complement(1646804..1647322) 1 NC_009767.1 PFAM: protein of unknown function DUF165; KEGG: rrs:RoseRS_0523 protein of unknown function DUF165; hypothetical protein 1647322 5538748 Rcas_1276 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431391.1 1646804 R 383372 CDS YP_001431392.1 156741263 5538749 1647722..1648756 1 NC_009767.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_0524 alanine racemase; LacI family transcriptional regulator 1648756 5538749 Rcas_1277 Roseiflexus castenholzii DSM 13941 LacI family transcriptional regulator YP_001431392.1 1647722 D 383372 CDS YP_001431393.1 156741264 5538750 1648778..1649881 1 NC_009767.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0525 ABC transporter related; ABC transporter-like protein 1649881 5538750 Rcas_1278 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431393.1 1648778 D 383372 CDS YP_001431394.1 156741265 5538751 1649905..1650288 1 NC_009767.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_0526 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1650288 5538751 Rcas_1279 Roseiflexus castenholzii DSM 13941 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001431394.1 1649905 D 383372 CDS YP_001431395.1 156741266 5538752 complement(1650439..1652061) 1 NC_009767.1 KEGG: rrs:RoseRS_0527 hypothetical protein; hypothetical protein 1652061 5538752 Rcas_1280 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431395.1 1650439 R 383372 CDS YP_001431396.1 156741267 5538753 1653090..1654382 1 NC_009767.1 KEGG: rrs:RoseRS_0528 hypothetical protein; hypothetical protein 1654382 5538753 Rcas_1281 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431396.1 1653090 D 383372 CDS YP_001431397.1 156741268 5538754 1654958..1655797 1 NC_009767.1 SMART: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0529 helix-turn-helix domain protein; XRE family transcriptional regulator 1655797 5538754 Rcas_1282 Roseiflexus castenholzii DSM 13941 XRE family transcriptional regulator YP_001431397.1 1654958 D 383372 CDS YP_001431398.1 156741269 5538755 1655812..1656309 1 NC_009767.1 PFAM: protein of unknown function DUF520; KEGG: rrs:RoseRS_0530 protein of unknown function DUF520; hypothetical protein 1656309 5538755 Rcas_1283 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431398.1 1655812 D 383372 CDS YP_001431399.1 156741270 5538756 1656310..1657758 1 NC_009767.1 KEGG: rrs:RoseRS_0531 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 1657758 5538756 Rcas_1284 Roseiflexus castenholzii DSM 13941 MiaB-like tRNA modifying protein YliG YP_001431399.1 1656310 D 383372 CDS YP_001431400.1 156741271 5538757 complement(1657795..1658214) 1 NC_009767.1 PFAM: Penicillinase repressor; KEGG: rrs:RoseRS_0532 transcriptional repressor, CopY family; CopY family transcriptional regulator 1658214 5538757 Rcas_1285 Roseiflexus castenholzii DSM 13941 CopY family transcriptional regulator YP_001431400.1 1657795 R 383372 CDS YP_001431401.1 156741272 5538758 1658391..1659407 1 NC_009767.1 PFAM: Polyprenyl synthetase; KEGG: rrs:RoseRS_0533 polyprenyl synthetase; polyprenyl synthetase 1659407 5538758 Rcas_1286 Roseiflexus castenholzii DSM 13941 polyprenyl synthetase YP_001431401.1 1658391 D 383372 CDS YP_001431402.1 156741273 5538759 complement(1659779..1660696) 1 NC_009767.1 KEGG: rrs:RoseRS_1002 conserved repeat domain; hypothetical protein 1660696 5538759 Rcas_1287 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431402.1 1659779 R 383372 CDS YP_001431403.1 156741274 5538760 1660803..1661960 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2179 glycosyl transferase, group 1; group 1 glycosyl transferase 1661960 5538760 Rcas_1288 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431403.1 1660803 D 383372 CDS YP_001431404.1 156741275 5538761 complement(1662200..1662547) 1 NC_009767.1 KEGG: sru:SRU_2010 transposase, orfB; transposase, orfB 1662547 5538761 Rcas_1289 Roseiflexus castenholzii DSM 13941 transposase, orfB YP_001431404.1 1662200 R 383372 CDS YP_001431405.1 156741276 5538762 complement(1662944..1664377) 1 NC_009767.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2180 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 1664377 5538762 Rcas_1290 Roseiflexus castenholzii DSM 13941 EmrB/QacA family drug resistance transporter YP_001431405.1 1662944 R 383372 CDS YP_001431406.1 156741277 5538763 complement(1664391..1665740) 1 NC_009767.1 KEGG: rrs:RoseRS_2181 GTP-binding protein Era; TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; SMART: AAA ATPase; GTP-binding protein Era 1665740 5538763 Rcas_1291 Roseiflexus castenholzii DSM 13941 GTP-binding protein Era YP_001431406.1 1664391 R 383372 CDS YP_001431407.1 156741278 5538764 complement(1665824..1666234) 1 NC_009767.1 KEGG: rrs:RoseRS_2182 hypothetical protein; hypothetical protein 1666234 5538764 Rcas_1292 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431407.1 1665824 R 383372 CDS YP_001431408.1 156741279 5538765 complement(1666295..1667365) 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_2183 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 1667365 5538765 Rcas_1293 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001431408.1 1666295 R 383372 CDS YP_001431409.1 156741280 5538766 complement(1667462..1668355) 1 NC_009767.1 KEGG: rrs:RoseRS_2184 hypothetical protein; hypothetical protein 1668355 5538766 Rcas_1294 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431409.1 1667462 R 383372 CDS YP_001431410.1 156741281 5538767 complement(1668372..1669088) 1 NC_009767.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2185 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 1669088 5538767 Rcas_1295 Roseiflexus castenholzii DSM 13941 ubiquinone/menaquinone biosynthesis methyltransferase YP_001431410.1 1668372 R 383372 CDS YP_001431411.1 156741282 5538768 complement(1669085..1669852) 1 NC_009767.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: rrs:RoseRS_2186 transcriptional acitvator, Baf family; Baf family transcriptional activator 1669852 5538768 Rcas_1296 Roseiflexus castenholzii DSM 13941 Baf family transcriptional activator YP_001431411.1 1669085 R 383372 CDS YP_001431412.1 156741283 5538769 complement(1669867..1670829) 1 NC_009767.1 PFAM: Asparaginase/glutaminase; KEGG: rrs:RoseRS_2187 asparaginase/glutaminase; asparaginase/glutaminase 1670829 5538769 Rcas_1297 Roseiflexus castenholzii DSM 13941 asparaginase/glutaminase YP_001431412.1 1669867 R 383372 CDS YP_001431413.1 156741284 5538770 complement(1670836..1671645) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2188 methyltransferase type 11; type 11 methyltransferase 1671645 5538770 Rcas_1298 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001431413.1 1670836 R 383372 CDS YP_001431414.1 156741285 5538771 complement(1672259..1673239) 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2189 oxidoreductase domain protein; oxidoreductase domain-containing protein 1673239 5538771 Rcas_1299 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001431414.1 1672259 R 383372 CDS YP_001431415.1 156741286 5538772 complement(1673372..1679380) 1 NC_009767.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: rrs:RoseRS_2190 alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain-containing protein 1679380 5538772 Rcas_1300 Roseiflexus castenholzii DSM 13941 alpha-2-macroglobulin domain-containing protein YP_001431415.1 1673372 R 383372 CDS YP_001431416.1 156741287 5538773 1679551..1679886 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_2191 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1679886 5538773 Rcas_1301 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001431416.1 1679551 D 383372 CDS YP_001431417.1 156741288 5538774 1679867..1680277 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: rrs:RoseRS_2192 HEPN domain protein; HEPN domain-containing protein 1680277 5538774 Rcas_1302 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001431417.1 1679867 D 383372 CDS YP_001431418.1 156741289 5538775 1680284..1681291 1 NC_009767.1 PFAM: luciferase family protein; KEGG: rxy:Rxyl_0211 luciferase-like protein; luciferase family protein 1681291 5538775 Rcas_1303 Roseiflexus castenholzii DSM 13941 luciferase family protein YP_001431418.1 1680284 D 383372 CDS YP_001431419.1 156741290 5538776 complement(1682693..1683949) 1 NC_009767.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2193 nuclease SbcCD, D subunit; nuclease SbcCD subunit D 1683949 5538776 Rcas_1304 Roseiflexus castenholzii DSM 13941 nuclease SbcCD subunit D YP_001431419.1 1682693 R 383372 CDS YP_001431420.1 156741291 5538777 complement(1684064..1685188) 1 NC_009767.1 KEGG: rrs:RoseRS_4120 hypothetical protein; hypothetical protein 1685188 5538777 Rcas_1305 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431420.1 1684064 R 383372 CDS YP_001431421.1 156741292 5538778 complement(1685242..1685484) 1 NC_009767.1 hypothetical protein 1685484 5538778 Rcas_1306 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431421.1 1685242 R 383372 CDS YP_001431422.1 156741293 5538779 complement(1685665..1686831) 1 NC_009767.1 KEGG: rrs:RoseRS_4118 hypothetical protein; hypothetical protein 1686831 5538779 Rcas_1307 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431422.1 1685665 R 383372 CDS YP_001431423.1 156741294 5538780 complement(1686875..1687600) 1 NC_009767.1 PFAM: phosphoribosyltransferase; KEGG: rrs:RoseRS_4117 phosphoribosyltransferase; phosphoribosyltransferase 1687600 5538780 Rcas_1308 Roseiflexus castenholzii DSM 13941 phosphoribosyltransferase YP_001431423.1 1686875 R 383372 CDS YP_001431424.1 156741295 5538781 1688234..1689088 1 NC_009767.1 PFAM: protein of unknown function DUF955; KEGG: chy:CHY_0294 hypothetical protein; hypothetical protein 1689088 5538781 Rcas_1309 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431424.1 1688234 D 383372 CDS YP_001431425.1 156741296 5538782 1689098..1689907 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4115 alpha/beta hydrolase fold; alpha/beta hydrolase 1689907 5538782 Rcas_1310 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001431425.1 1689098 D 383372 CDS YP_001431426.1 156741297 5538783 1692859..1693149 1 NC_009767.1 hypothetical protein 1693149 5538783 Rcas_1311 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431426.1 1692859 D 383372 CDS YP_001431427.1 156741298 5538785 complement(1693905..1694480) 1 NC_009767.1 KEGG: gvi:gll2576 hypothetical protein; hypothetical protein 1694480 5538785 Rcas_1313 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431427.1 1693905 R 383372 CDS YP_001431428.1 156741299 5538786 complement(1694470..1694745) 1 NC_009767.1 hypothetical protein 1694745 5538786 Rcas_1314 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431428.1 1694470 R 383372 CDS YP_001431429.1 156741300 5538787 complement(1694977..1695798) 1 NC_009767.1 KEGG: sbl:Sbal_1580 DNA methylase N-4/N-6 domain protein; hypothetical protein 1695798 5538787 Rcas_1315 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431429.1 1694977 R 383372 CDS YP_001431430.1 156741301 5538788 1696025..1696315 1 NC_009767.1 hypothetical protein 1696315 5538788 Rcas_1316 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431430.1 1696025 D 383372 CDS YP_001431431.1 156741302 5538789 complement(1696772..1697446) 1 NC_009767.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rrs:RoseRS_1921 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase type-1 1697446 5538789 Rcas_1317 Roseiflexus castenholzii DSM 13941 phosphomethylpyrimidine kinase type-1 YP_001431431.1 1696772 R 383372 CDS YP_001431432.1 156741303 5538790 complement(1697452..1697886) 1 NC_009767.1 PFAM: UspA domain protein; KEGG: rrs:RoseRS_3672 UspA domain protein; UspA domain-containing protein 1697886 5538790 Rcas_1318 Roseiflexus castenholzii DSM 13941 UspA domain-containing protein YP_001431432.1 1697452 R 383372 CDS YP_001431433.1 156741304 5538791 complement(1697904..1700693) 1 NC_009767.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_3673 ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAD superfamily ATPase 1700693 5538791 Rcas_1319 Roseiflexus castenholzii DSM 13941 HAD superfamily ATPase YP_001431433.1 1697904 R 383372 CDS YP_001431434.1 156741305 5538792 complement(1700713..1701237) 1 NC_009767.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rrs:RoseRS_3674 NADH-quinone oxidoreductase, E subunit; NADH-quinone oxidoreductase subunit E 1701237 5538792 Rcas_1320 Roseiflexus castenholzii DSM 13941 NADH-quinone oxidoreductase subunit E YP_001431434.1 1700713 R 383372 CDS YP_001431435.1 156741306 5538793 complement(1701264..1702517) 1 NC_009767.1 KEGG: rrs:RoseRS_3675 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D 1702517 5538793 Rcas_1321 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase I subunit D YP_001431435.1 1701264 R 383372 CDS YP_001431436.1 156741307 5538794 complement(1702524..1703048) 1 NC_009767.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rrs:RoseRS_3676 NADH (or F420H2) dehydrogenase, subunit C; NADH (or F420H2) dehydrogenase subunit C 1703048 5538794 Rcas_1322 Roseiflexus castenholzii DSM 13941 NADH (or F420H2) dehydrogenase subunit C YP_001431436.1 1702524 R 383372 CDS YP_001431437.1 156741308 5538795 complement(1703124..1703627) 1 NC_009767.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1703627 5538795 Rcas_1323 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase subunit B YP_001431437.1 1703124 R 383372 CDS YP_001431438.1 156741309 5538796 complement(1703618..1703974) 1 NC_009767.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: rrs:RoseRS_3678 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 1703974 5538796 Rcas_1324 Roseiflexus castenholzii DSM 13941 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_001431438.1 1703618 R 383372 CDS YP_001431439.1 156741310 5538797 complement(1704067..1704594) 1 NC_009767.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rrs:RoseRS_3679 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 1704594 5538797 Rcas_1325 Roseiflexus castenholzii DSM 13941 methylated-DNA--protein-cysteine methyltransferase YP_001431439.1 1704067 R 383372 CDS YP_001431440.1 156741311 5538798 complement(1704596..1705861) 1 NC_009767.1 TIGRFAM: conserved repeat domain; KEGG: rrs:RoseRS_3680 conserved repeat domain; hypothetical protein 1705861 5538798 Rcas_1326 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431440.1 1704596 R 383372 CDS YP_001431441.1 156741312 5538799 complement(1706021..1706800) 1 NC_009767.1 KEGG: rrs:RoseRS_3681 hypothetical protein; hypothetical protein 1706800 5538799 Rcas_1327 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431441.1 1706021 R 383372 CDS YP_001431442.1 156741313 5538800 complement(1707040..1708038) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3682 glycosyl transferase, family 2; glycosyl transferase family protein 1708038 5538800 Rcas_1328 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431442.1 1707040 R 383372 CDS YP_001431443.1 156741314 5538801 1708117..1708569 1 NC_009767.1 KEGG: rrs:RoseRS_3683 hypothetical protein; hypothetical protein 1708569 5538801 Rcas_1329 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431443.1 1708117 D 383372 CDS YP_001431444.1 156741315 5538802 complement(1708624..1709070) 1 NC_009767.1 PFAM: Septum formation initiator; KEGG: rrs:RoseRS_3684 septum formation initiator; septum formation initiator 1709070 5538802 Rcas_1330 Roseiflexus castenholzii DSM 13941 septum formation initiator YP_001431444.1 1708624 R 383372 CDS YP_001431445.1 156741316 5538803 complement(1709281..1709700) 1 NC_009767.1 PFAM: protein of unknown function DUF583; KEGG: rrs:RoseRS_3685 protein of unknown function DUF583; hypothetical protein 1709700 5538803 Rcas_1331 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431445.1 1709281 R 383372 CDS YP_001431446.1 156741317 5538804 complement(1710139..1711035) 1 NC_009767.1 KEGG: rrs:RoseRS_3686 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 1711035 5538804 Rcas_1332 Roseiflexus castenholzii DSM 13941 tRNA (guanine-N1)-methyltransferase YP_001431446.1 1710139 R 383372 CDS YP_001431447.1 156741318 5538805 1711121..1711618 1 NC_009767.1 PFAM: carbonic anhydrase; KEGG: rrs:RoseRS_3687 carbonic anhydrase; carbonic anhydrase 1711618 5538805 Rcas_1333 Roseiflexus castenholzii DSM 13941 carbonic anhydrase YP_001431447.1 1711121 D 383372 CDS YP_001431448.1 156741319 5538806 1712698..1713165 1 NC_009767.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_3555 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1713165 5538806 Rcas_1334 Roseiflexus castenholzii DSM 13941 alkyl hydroperoxide reductase YP_001431448.1 1712698 D 383372 CDS YP_001431449.1 156741320 5538807 complement(1713162..1713773) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3554 protein of unknown function DUF820; hypothetical protein 1713773 5538807 Rcas_1335 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431449.1 1713162 R 383372 CDS YP_001431450.1 156741321 5538808 complement(1713804..1714415) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3553 protein of unknown function DUF820; hypothetical protein 1714415 5538808 Rcas_1336 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431450.1 1713804 R 383372 CDS YP_001431451.1 156741322 5538809 complement(1714430..1715368) 1 NC_009767.1 PFAM: Acetamidase/Formamidase; KEGG: rrs:RoseRS_3551 acetamidase/formamidase; acetamidase/formamidase 1715368 5538809 Rcas_1337 Roseiflexus castenholzii DSM 13941 acetamidase/formamidase YP_001431451.1 1714430 R 383372 CDS YP_001431452.1 156741323 5538810 1715938..1717185 1 NC_009767.1 PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3550 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1717185 5538810 Rcas_1338 Roseiflexus castenholzii DSM 13941 FAD dependent oxidoreductase YP_001431452.1 1715938 D 383372 CDS YP_001431453.1 156741324 5538811 complement(1717106..1717822) 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_3549 ICC-like phosphoesterase-like protein; metallophosphoesterase 1717822 5538811 Rcas_1339 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001431453.1 1717106 R 383372 CDS YP_001431454.1 156741325 5538812 1717866..1718111 1 NC_009767.1 hypothetical protein 1718111 5538812 Rcas_1340 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431454.1 1717866 D 383372 CDS YP_001431455.1 156741326 5538813 1718232..1718672 1 NC_009767.1 PFAM: membrane protein of unknown function; KEGG: rrs:RoseRS_3547 membrane protein of unknown function; hypothetical protein 1718672 5538813 Rcas_1341 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431455.1 1718232 D 383372 CDS YP_001431456.1 156741327 5538814 1718879..1720888 1 NC_009767.1 PFAM: protein of unknown function DUF1680; KEGG: rrs:RoseRS_3545 protein of unknown function DUF1680; hypothetical protein 1720888 5538814 Rcas_1342 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431456.1 1718879 D 383372 CDS YP_001431457.1 156741328 5538815 complement(1720867..1721508) 1 NC_009767.1 PFAM: protein of unknown function DUF218; KEGG: rrs:RoseRS_4260 protein of unknown function DUF218; hypothetical protein 1721508 5538815 Rcas_1343 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431457.1 1720867 R 383372 CDS YP_001431458.1 156741329 5538816 complement(1721849..1722529) 1 NC_009767.1 KEGG: rrs:RoseRS_4261 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 1722529 5538816 Rcas_1344 Roseiflexus castenholzii DSM 13941 hexapaptide repeat-containing transferase YP_001431458.1 1721849 R 383372 CDS YP_001431459.1 156741330 5538817 complement(1722526..1723146) 1 NC_009767.1 PFAM: sugar transferase; KEGG: rrs:RoseRS_4262 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase 1723146 5538817 Rcas_1345 Roseiflexus castenholzii DSM 13941 UDP-phosphate galactose phosphotransferase YP_001431459.1 1722526 R 383372 CDS YP_001431460.1 156741331 5538818 complement(1723151..1724350) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4263 glycosyl transferase, group 1; group 1 glycosyl transferase 1724350 5538818 Rcas_1346 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431460.1 1723151 R 383372 CDS YP_001431461.1 156741332 5538819 complement(1724347..1725450) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4264 glycosyl transferase, group 1; group 1 glycosyl transferase 1725450 5538819 Rcas_1347 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431461.1 1724347 R 383372 CDS YP_001431462.1 156741333 5538820 complement(1725458..1726393) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4265 glycosyl transferase, family 2; glycosyl transferase family protein 1726393 5538820 Rcas_1348 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431462.1 1725458 R 383372 CDS YP_001431463.1 156741334 5538821 complement(1726372..1727556) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4266 glycosyl transferase, group 1; group 1 glycosyl transferase 1727556 5538821 Rcas_1349 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431463.1 1726372 R 383372 CDS YP_001431464.1 156741335 5538822 complement(1727541..1728761) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4267 glycosyl transferase, group 1; group 1 glycosyl transferase 1728761 5538822 Rcas_1350 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431464.1 1727541 R 383372 CDS YP_001431465.1 156741336 5538823 complement(1728765..1730111) 1 NC_009767.1 PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4268 O-antigen polymerase; O-antigen polymerase 1730111 5538823 Rcas_1351 Roseiflexus castenholzii DSM 13941 O-antigen polymerase YP_001431465.1 1728765 R 383372 CDS YP_001431466.1 156741337 5538824 complement(1730080..1731354) 1 NC_009767.1 PFAM: polysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4269 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1731354 5538824 Rcas_1352 Roseiflexus castenholzii DSM 13941 polysaccharide biosynthesis protein YP_001431466.1 1730080 R 383372 CDS YP_001431467.1 156741338 5538825 complement(1731400..1733274) 1 NC_009767.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4270 non-specific protein-tyrosine kinase; non-specific protein-tyrosine kinase 1733274 5538825 Rcas_1353 Roseiflexus castenholzii DSM 13941 non-specific protein-tyrosine kinase YP_001431467.1 1731400 R 383372 CDS YP_001431468.1 156741339 5538826 complement(1733428..1733889) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_4271 response regulator receiver protein; response regulator receiver protein 1733889 5538826 Rcas_1354 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001431468.1 1733428 R 383372 CDS YP_001431469.1 156741340 5538827 complement(1734503..1735195) 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4275 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1735195 5538827 Rcas_1355 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001431469.1 1734503 R 383372 CDS YP_001431470.1 156741341 5538828 complement(1735247..1736095) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_4276 histidine kinase; histidine kinase 1736095 5538828 Rcas_1356 Roseiflexus castenholzii DSM 13941 histidine kinase YP_001431470.1 1735247 R 383372 CDS YP_001431471.1 156741342 5538829 complement(1736248..1736955) 1 NC_009767.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_4170 sortase family protein; sortase family protein 1736955 5538829 Rcas_1357 Roseiflexus castenholzii DSM 13941 sortase family protein YP_001431471.1 1736248 R 383372 CDS YP_001431472.1 156741343 5538830 complement(1736952..1737503) 1 NC_009767.1 KEGG: rrs:RoseRS_4169 hypothetical protein; hypothetical protein 1737503 5538830 Rcas_1358 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431472.1 1736952 R 383372 CDS YP_001431473.1 156741344 5538831 complement(1737500..1738501) 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4168 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1738501 5538831 Rcas_1359 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431473.1 1737500 R 383372 CDS YP_001431474.1 156741345 5538832 complement(1738511..1740442) 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_4167 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 1740442 5538832 Rcas_1360 Roseiflexus castenholzii DSM 13941 polysaccharide biosynthesis protein CapD YP_001431474.1 1738511 R 383372 CDS YP_001431475.1 156741346 5538833 complement(1740439..1741662) 1 NC_009767.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: rrs:RoseRS_4166 DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase 1741662 5538833 Rcas_1361 Roseiflexus castenholzii DSM 13941 glutamine--scyllo-inositol transaminase YP_001431475.1 1740439 R 383372 CDS YP_001431476.1 156741347 5538834 complement(1741762..1742727) 1 NC_009767.1 KEGG: aor:AO090103000466 predicted protein Pfam: Cytadhesin_P30 DUF1407 Collagen PROSITE: ASN_RICH GLY_RICH PRO_RICH SER_RICH THR_RICH; hypothetical protein 1742727 5538834 Rcas_1362 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431476.1 1741762 R 383372 CDS YP_001431477.1 156741348 5538835 complement(1742779..1745697) 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_3544 von Willebrand factor, type A; von Willebrand factor type A 1745697 5538835 Rcas_1363 Roseiflexus castenholzii DSM 13941 von Willebrand factor type A YP_001431477.1 1742779 R 383372 CDS YP_001431478.1 156741349 5538836 1745851..1746372 1 NC_009767.1 with HoxF and HoxU catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution; bidirectional hydrogenase complex protein HoxE 1746372 5538836 Rcas_1364 Roseiflexus castenholzii DSM 13941 bidirectional hydrogenase complex protein HoxE YP_001431478.1 1745851 D 383372 CDS YP_001431479.1 156741350 5538837 1746535..1748133 1 NC_009767.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: rrs:RoseRS_3542 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1748133 5538837 Rcas_1365 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase (quinone) YP_001431479.1 1746535 D 383372 CDS YP_001431480.1 156741351 5538838 1748157..1748864 1 NC_009767.1 with HoxF and HoxE catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution; bidirectional hydrogenase complex protein HoxU 1748864 5538838 Rcas_1366 Roseiflexus castenholzii DSM 13941 bidirectional hydrogenase complex protein HoxU YP_001431480.1 1748157 D 383372 CDS YP_001431481.1 156741352 5538839 1748985..1749530 1 NC_009767.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rrs:RoseRS_3540 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1749530 5538839 Rcas_1367 Roseiflexus castenholzii DSM 13941 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001431481.1 1748985 D 383372 CDS YP_001431482.1 156741353 5538840 1749542..1750969 1 NC_009767.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: rrs:RoseRS_3539 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 1750969 5538840 Rcas_1368 Roseiflexus castenholzii DSM 13941 nickel-dependent hydrogenase large subunit YP_001431482.1 1749542 D 383372 CDS YP_001431483.1 156741354 5538841 1751294..1751737 1 NC_009767.1 KEGG: rrs:RoseRS_3538 hypothetical protein; hypothetical protein 1751737 5538841 Rcas_1369 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431483.1 1751294 D 383372 CDS YP_001431484.1 156741355 5538842 1752979..1753290 1 NC_009767.1 hypothetical protein 1753290 5538842 Rcas_1370 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431484.1 1752979 D 383372 CDS YP_001431485.1 156741356 5538843 1753486..1754313 1 NC_009767.1 KEGG: rrs:RoseRS_3537 protein-disulfide isomerase-like protein; protein-disulfide isomerase-like protein 1754313 5538843 Rcas_1371 Roseiflexus castenholzii DSM 13941 protein-disulfide isomerase-like protein YP_001431485.1 1753486 D 383372 CDS YP_001431486.1 156741357 5538844 1754505..1756472 1 NC_009767.1 KEGG: rrs:RoseRS_3536 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor protein 1756472 5538844 Rcas_1372 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001431486.1 1754505 D 383372 CDS YP_001431487.1 156741358 5538845 1756907..1757128 1 NC_009767.1 KEGG: rrs:RoseRS_3535 hypothetical protein; hypothetical protein 1757128 5538845 Rcas_1373 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431487.1 1756907 D 383372 CDS YP_001431488.1 156741359 5538847 1757572..1757913 1 NC_009767.1 KEGG: rrs:RoseRS_3534 hypothetical protein; hypothetical protein 1757913 5538847 Rcas_1374 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431488.1 1757572 D 383372 CDS YP_001431489.1 156741360 5538848 1757944..1760070 1 NC_009767.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_3533 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 1760070 5538848 Rcas_1375 Roseiflexus castenholzii DSM 13941 peptidase S9 prolyl oligopeptidase YP_001431489.1 1757944 D 383372 CDS YP_001431490.1 156741361 5538849 1760063..1760320 1 NC_009767.1 KEGG: rrs:RoseRS_3532 hypothetical protein; hypothetical protein 1760320 5538849 Rcas_1376 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431490.1 1760063 D 383372 CDS YP_001431491.1 156741362 5538850 1760338..1762095 1 NC_009767.1 PFAM: Dynamin family protein; GTP-binding protein HSR1-related; Miro domain protein; KEGG: rrs:RoseRS_3531 dynamin family protein; dynamin family protein 1762095 5538850 Rcas_1377 Roseiflexus castenholzii DSM 13941 dynamin family protein YP_001431491.1 1760338 D 383372 CDS YP_001431492.1 156741363 5538851 1762095..1762937 1 NC_009767.1 PFAM: protein of unknown function DUF62; KEGG: rrs:RoseRS_3530 protein of unknown function DUF62; hypothetical protein 1762937 5538851 Rcas_1378 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431492.1 1762095 D 383372 CDS YP_001431493.1 156741364 5538852 1763280..1765358 1 NC_009767.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: rrs:RoseRS_3529 serine protein kinase, PrkA; serine protein kinase PrkA 1765358 5538852 Rcas_1379 Roseiflexus castenholzii DSM 13941 serine protein kinase PrkA YP_001431493.1 1763280 D 383372 CDS YP_001431494.1 156741365 5538853 1765543..1766652 1 NC_009767.1 PFAM: protein of unknown function DUF444; KEGG: rrs:RoseRS_3528 protein of unknown function DUF444; hypothetical protein 1766652 5538853 Rcas_1380 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431494.1 1765543 D 383372 CDS YP_001431495.1 156741366 5538854 1766672..1769368 1 NC_009767.1 PFAM: SpoVR family protein; SMART: Hedgehog/intein hint domain protein; KEGG: rrs:RoseRS_3527 SpoVR family protein; SpoVR family protein 1769368 5538854 Rcas_1381 Roseiflexus castenholzii DSM 13941 SpoVR family protein YP_001431495.1 1766672 D 383372 CDS YP_001431496.1 156741367 5538855 1769390..1769923 1 NC_009767.1 KEGG: rrs:RoseRS_3526 hypothetical protein; hypothetical protein 1769923 5538855 Rcas_1382 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431496.1 1769390 D 383372 CDS YP_001431497.1 156741368 5538856 1769927..1770796 1 NC_009767.1 TIGRFAM: modification methylase, HemK family; PFAM: RNA methylase; methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 12; KEGG: rrs:RoseRS_3525 modification methylase, HemK family; HemK family modification methylase 1770796 5538856 Rcas_1383 Roseiflexus castenholzii DSM 13941 HemK family modification methylase YP_001431497.1 1769927 D 383372 CDS YP_001431498.1 156741369 5538857 complement(1770944..1772140) 1 NC_009767.1 KEGG: rrs:RoseRS_4114 hypothetical protein; hypothetical protein 1772140 5538857 Rcas_1384 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431498.1 1770944 R 383372 CDS YP_001431499.1 156741370 5538858 complement(1772144..1773418) 1 NC_009767.1 PFAM: glycoside hydrolase family 4; KEGG: rrs:RoseRS_4113 glycoside hydrolase, family 4; glycoside hydrolase family protein 1773418 5538858 Rcas_1385 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001431499.1 1772144 R 383372 CDS YP_001431500.1 156741371 5538859 complement(1773483..1774448) 1 NC_009767.1 PFAM: 3-dehydroquinate synthase; KEGG: rrs:RoseRS_4112 3-dehydroquinate synthase; 3-dehydroquinate synthase 1774448 5538859 Rcas_1386 Roseiflexus castenholzii DSM 13941 3-dehydroquinate synthase YP_001431500.1 1773483 R 383372 CDS YP_001431501.1 156741372 5538860 complement(1774448..1774858) 1 NC_009767.1 PFAM: DNA mismatch endonuclease vsr; KEGG: rrs:RoseRS_4111 DNA mismatch endonuclease vsr; DNA mismatch endonuclease vsr 1774858 5538860 Rcas_1387 Roseiflexus castenholzii DSM 13941 DNA mismatch endonuclease vsr YP_001431501.1 1774448 R 383372 CDS YP_001431502.1 156741373 5538861 complement(1774862..1775731) 1 NC_009767.1 KEGG: rrs:RoseRS_4110 hypothetical protein; hypothetical protein 1775731 5538861 Rcas_1388 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431502.1 1774862 R 383372 CDS YP_001431503.1 156741374 5538862 complement(1775718..1776881) 1 NC_009767.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: rrs:RoseRS_4109 DNA-cytosine methyltransferase; DNA-cytosine methyltransferase 1776881 5538862 Rcas_1389 Roseiflexus castenholzii DSM 13941 DNA-cytosine methyltransferase YP_001431503.1 1775718 R 383372 CDS YP_001431504.1 156741375 5538863 complement(1777005..1778945) 1 NC_009767.1 hypothetical protein 1778945 5538863 Rcas_1390 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431504.1 1777005 R 383372 CDS YP_001431505.1 156741376 5538865 complement(1779649..1780311) 1 NC_009767.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 1780311 5538865 Rcas_1392 Roseiflexus castenholzii DSM 13941 redox-sensing transcriptional repressor Rex YP_001431505.1 1779649 R 383372 CDS YP_001431506.1 156741377 5538866 complement(1780435..1782723) 1 NC_009767.1 KEGG: rrs:RoseRS_2213 hypothetical protein; hypothetical protein 1782723 5538866 Rcas_1393 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431506.1 1780435 R 383372 CDS YP_001431507.1 156741378 5538867 complement(1782704..1784017) 1 NC_009767.1 KEGG: rrs:RoseRS_2212 hypothetical protein; hypothetical protein 1784017 5538867 Rcas_1394 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431507.1 1782704 R 383372 CDS YP_001431508.1 156741379 5538868 complement(1784017..1785867) 1 NC_009767.1 KEGG: rrs:RoseRS_2211 type IV secretory pathway VirB4 components-like protein; type IV secretory pathway VirB4 components-like protein 1785867 5538868 Rcas_1395 Roseiflexus castenholzii DSM 13941 type IV secretory pathway VirB4 components-like protein YP_001431508.1 1784017 R 383372 CDS YP_001431509.1 156741380 5538869 complement(1785874..1786548) 1 NC_009767.1 KEGG: rrs:RoseRS_2210 hypothetical protein; hypothetical protein 1786548 5538869 Rcas_1396 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431509.1 1785874 R 383372 CDS YP_001431510.1 156741381 5538870 complement(1786541..1786930) 1 NC_009767.1 KEGG: rrs:RoseRS_2209 hypothetical protein; hypothetical protein 1786930 5538870 Rcas_1397 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431510.1 1786541 R 383372 CDS YP_001431511.1 156741382 5538871 complement(1786950..1787249) 1 NC_009767.1 KEGG: rrs:RoseRS_2208 hypothetical protein; hypothetical protein 1787249 5538871 Rcas_1398 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431511.1 1786950 R 383372 CDS YP_001431512.1 156741383 5538872 complement(1787307..1790144) 1 NC_009767.1 PFAM: peptidase M23B; KEGG: rrs:RoseRS_2207 hypothetical protein; peptidase M23B 1790144 5538872 Rcas_1399 Roseiflexus castenholzii DSM 13941 peptidase M23B YP_001431512.1 1787307 R 383372 CDS YP_001431513.1 156741384 5538873 complement(1790141..1792669) 1 NC_009767.1 KEGG: rrs:RoseRS_2206 hypothetical protein; hypothetical protein 1792669 5538873 Rcas_1400 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431513.1 1790141 R 383372 CDS YP_001431514.1 156741385 5538874 complement(1792711..1793409) 1 NC_009767.1 KEGG: rrs:RoseRS_2205 hypothetical protein; hypothetical protein 1793409 5538874 Rcas_1401 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431514.1 1792711 R 383372 CDS YP_001431515.1 156741386 5538875 complement(1793426..1794217) 1 NC_009767.1 KEGG: rrs:RoseRS_2204 hypothetical protein; hypothetical protein 1794217 5538875 Rcas_1402 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431515.1 1793426 R 383372 CDS YP_001431516.1 156741387 5538876 complement(1794239..1795189) 1 NC_009767.1 KEGG: rrs:RoseRS_2203 hypothetical protein; hypothetical protein 1795189 5538876 Rcas_1403 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431516.1 1794239 R 383372 CDS YP_001431517.1 156741388 5538877 complement(1795202..1797259) 1 NC_009767.1 PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_2202 type II secretion system protein E; type II secretion system protein E 1797259 5538877 Rcas_1404 Roseiflexus castenholzii DSM 13941 type II secretion system protein E YP_001431517.1 1795202 R 383372 CDS YP_001431518.1 156741389 5538878 complement(1797641..1798891) 1 NC_009767.1 KEGG: rrs:RoseRS_2201 ATPase involved in chromosome partitioning-like protein; chromosome partitioning ATPase 1798891 5538878 Rcas_1405 Roseiflexus castenholzii DSM 13941 chromosome partitioning ATPase YP_001431518.1 1797641 R 383372 CDS YP_001431519.1 156741390 5538879 complement(1798922..1800178) 1 NC_009767.1 PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_2200 type II secretion system protein E; type II secretion system protein E 1800178 5538879 Rcas_1406 Roseiflexus castenholzii DSM 13941 type II secretion system protein E YP_001431519.1 1798922 R 383372 CDS YP_001431520.1 156741391 5538880 complement(1800232..1801128) 1 NC_009767.1 PFAM: SAF domain protein; KEGG: rrs:RoseRS_2199 SAF domain; SAF domain-containing protein 1801128 5538880 Rcas_1407 Roseiflexus castenholzii DSM 13941 SAF domain-containing protein YP_001431520.1 1800232 R 383372 CDS YP_001431521.1 156741392 5538881 complement(1801164..1801688) 1 NC_009767.1 KEGG: rrs:RoseRS_2198 hypothetical protein; hypothetical protein 1801688 5538881 Rcas_1408 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431521.1 1801164 R 383372 CDS YP_001431522.1 156741393 5538882 complement(1801707..1802360) 1 NC_009767.1 PFAM: TadE family protein; KEGG: rrs:RoseRS_2197 TadE family protein; TadE family protein 1802360 5538882 Rcas_1409 Roseiflexus castenholzii DSM 13941 TadE family protein YP_001431522.1 1801707 R 383372 CDS YP_001431523.1 156741394 5538883 complement(1802421..1805537) 1 NC_009767.1 TIGRFAM: conserved repeat domain; KEGG: rrs:RoseRS_2196 conserved repeat domain; hypothetical protein 1805537 5538883 Rcas_1410 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431523.1 1802421 R 383372 CDS YP_001431524.1 156741395 5538884 complement(1805571..1806200) 1 NC_009767.1 KEGG: rrs:RoseRS_2194 hypothetical protein; hypothetical protein 1806200 5538884 Rcas_1411 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431524.1 1805571 R 383372 CDS YP_001431525.1 156741396 5538885 complement(1806259..1807482) 1 NC_009767.1 PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_2195 allergen V5/TPX-1 family protein; SCP-like extracellular 1807482 5538885 Rcas_1412 Roseiflexus castenholzii DSM 13941 SCP-like extracellular YP_001431525.1 1806259 R 383372 CDS YP_001431526.1 156741397 5538886 complement(1808522..1809289) 1 NC_009767.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3977 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 1809289 5538886 Rcas_1413 Roseiflexus castenholzii DSM 13941 HAD family hydrolase YP_001431526.1 1808522 R 383372 CDS YP_001431527.1 156741398 5538887 complement(1809286..1809555) 1 NC_009767.1 KEGG: rrs:RoseRS_3976 hypothetical protein; hypothetical protein 1809555 5538887 Rcas_1414 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431527.1 1809286 R 383372 CDS YP_001431528.1 156741399 5538888 complement(1809566..1810666) 1 NC_009767.1 PFAM: Methicillin resistance protein; KEGG: rrs:RoseRS_3975 methicillin resistance protein; methicillin resistance protein 1810666 5538888 Rcas_1415 Roseiflexus castenholzii DSM 13941 methicillin resistance protein YP_001431528.1 1809566 R 383372 CDS YP_001431529.1 156741400 5538889 complement(1810651..1811469) 1 NC_009767.1 PFAM: LmbE family protein; KEGG: rrs:RoseRS_3974 LmbE family protein; LmbE family protein 1811469 5538889 Rcas_1416 Roseiflexus castenholzii DSM 13941 LmbE family protein YP_001431529.1 1810651 R 383372 CDS YP_001431530.1 156741401 5538890 complement(1811833..1812762) 1 NC_009767.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_3973 PBS lyase heat domain protein repeat-containing protein; PBS lyase 1812762 5538890 Rcas_1417 Roseiflexus castenholzii DSM 13941 PBS lyase YP_001431530.1 1811833 R 383372 CDS YP_001431531.1 156741402 5538891 complement(1812775..1814649) 1 NC_009767.1 KEGG: rrs:RoseRS_3972 hypothetical protein; hypothetical protein 1814649 5538891 Rcas_1418 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431531.1 1812775 R 383372 CDS YP_001431532.1 156741403 5538892 complement(1814646..1814801) 1 NC_009767.1 KEGG: rrs:RoseRS_3971 hypothetical protein; hypothetical protein 1814801 5538892 Rcas_1419 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431532.1 1814646 R 383372 CDS YP_001431533.1 156741404 5538893 1815090..1816184 1 NC_009767.1 KEGG: mba:Mbar_A1776 magnesium-chelatase subunit; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; magnesium chelatase 1816184 5538893 Rcas_1420 Roseiflexus castenholzii DSM 13941 magnesium chelatase YP_001431533.1 1815090 D 383372 CDS YP_001431534.1 156741405 5538894 1816181..1817170 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: mac:MA0877 magnesium-chelatase subunit; von Willebrand factor A 1817170 5538894 Rcas_1421 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001431534.1 1816181 D 383372 CDS YP_001431535.1 156741406 5538895 1817226..1818737 1 NC_009767.1 PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_3968 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 1818737 5538895 Rcas_1422 Roseiflexus castenholzii DSM 13941 RNA-binding S1 domain-containing protein YP_001431535.1 1817226 D 383372 CDS YP_001431536.1 156741407 5538896 1818912..1819085 1 NC_009767.1 PFAM: ribosomal protein L34; KEGG: rrs:RoseRS_3967 ribosomal protein L34; 50S ribosomal protein L34 1819085 5538896 Rcas_1423 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L34 YP_001431536.1 1818912 D 383372 CDS YP_001431537.1 156741408 5538897 1819149..1819517 1 NC_009767.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: rrs:RoseRS_3966 ribonuclease P protein component; ribonuclease P protein component 1819517 5538897 Rcas_1424 Roseiflexus castenholzii DSM 13941 ribonuclease P protein component YP_001431537.1 1819149 D 383372 CDS YP_001431538.1 156741409 5538898 1819546..1820715 1 NC_009767.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: cje:Cj0208 DNA modification methylase (adenine-specific methyltransferase); adenine-specific DNA methyltransferase 1820715 5538898 Rcas_1425 Roseiflexus castenholzii DSM 13941 adenine-specific DNA methyltransferase YP_001431538.1 1819546 D 383372 CDS YP_001431539.1 156741410 5538899 1821040..1821429 1 NC_009767.1 hypothetical protein 1821429 5538899 Rcas_1426 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431539.1 1821040 D 383372 CDS YP_001431540.1 156741411 5538900 1821565..1822602 1 NC_009767.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: rrs:RoseRS_3965 60 kDa inner membrane insertion protein; hypothetical protein 1822602 5538900 Rcas_1427 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431540.1 1821565 D 383372 CDS YP_001431541.1 156741412 5538901 1822682..1823371 1 NC_009767.1 PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: rrs:RoseRS_3964 single-stranded nucleic acid binding R3H domain protein; single-stranded nucleic acid binding R3H domain-containing protein 1823371 5538901 Rcas_1428 Roseiflexus castenholzii DSM 13941 single-stranded nucleic acid binding R3H domain-containing protein YP_001431541.1 1822682 D 383372 CDS YP_001431542.1 156741413 5538902 1823446..1824264 1 NC_009767.1 PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3963 PfkB domain protein; ribokinase-like domain-containing protein 1824264 5538902 Rcas_1429 Roseiflexus castenholzii DSM 13941 ribokinase-like domain-containing protein YP_001431542.1 1823446 D 383372 CDS YP_001431543.1 156741414 5538903 complement(1825457..1826299) 1 NC_009767.1 KEGG: rrs:RoseRS_1027 hypothetical protein; hypothetical protein 1826299 5538903 Rcas_1430 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431543.1 1825457 R 383372 CDS YP_001431544.1 156741415 5538904 complement(1826299..1826952) 1 NC_009767.1 PFAM: TENA/THI-4 domain protein; KEGG: rrs:RoseRS_1028 transcriptional activator, TenA family; TenA family transcription regulator 1826952 5538904 Rcas_1431 Roseiflexus castenholzii DSM 13941 TenA family transcription regulator YP_001431544.1 1826299 R 383372 CDS YP_001431545.1 156741416 5538905 complement(1827261..1828049) 1 NC_009767.1 KEGG: rrs:RoseRS_1030 hypothetical protein; hypothetical protein 1828049 5538905 Rcas_1432 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431545.1 1827261 R 383372 CDS YP_001431546.1 156741417 5538906 complement(1828275..1829063) 1 NC_009767.1 KEGG: rrs:RoseRS_1029 hypothetical protein; hypothetical protein 1829063 5538906 Rcas_1433 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431546.1 1828275 R 383372 CDS YP_001431547.1 156741418 5538907 1829171..1829848 1 NC_009767.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: rrs:RoseRS_1032 translation initiation factor IF-3; translation initiation factor IF-3 1829848 5538907 Rcas_1434 Roseiflexus castenholzii DSM 13941 translation initiation factor IF-3 YP_001431547.1 1829171 D 383372 CDS YP_001431548.1 156741419 5538908 1829862..1830065 1 NC_009767.1 PFAM: ribosomal protein L35; KEGG: rrs:RoseRS_1033 ribosomal protein L35; 50S ribosomal protein L35 1830065 5538908 Rcas_1435 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L35 YP_001431548.1 1829862 D 383372 CDS YP_001431549.1 156741420 5538909 1830102..1830455 1 NC_009767.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1830455 rplT 5538909 rplT Roseiflexus castenholzii DSM 13941 50S ribosomal protein L20 YP_001431549.1 1830102 D 383372 CDS YP_001431550.1 156741421 5538910 1830533..1831240 1 NC_009767.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rrs:RoseRS_1035 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1831240 5538910 Rcas_1437 Roseiflexus castenholzii DSM 13941 tRNA/rRNA methyltransferase SpoU YP_001431550.1 1830533 D 383372 CDS YP_001431551.1 156741422 5538911 1831677..1832720 1 NC_009767.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1832720 pheS 5538911 pheS Roseiflexus castenholzii DSM 13941 phenylalanyl-tRNA synthetase subunit alpha YP_001431551.1 1831677 D 383372 CDS YP_001431552.1 156741423 5538912 1832720..1834552 1 NC_009767.1 KEGG: rrs:RoseRS_1037 hypothetical protein; hypothetical protein 1834552 5538912 Rcas_1439 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431552.1 1832720 D 383372 CDS YP_001431553.1 156741424 5538913 1834562..1837063 1 NC_009767.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1837063 pheT 5538913 pheT Roseiflexus castenholzii DSM 13941 phenylalanyl-tRNA synthetase subunit beta YP_001431553.1 1834562 D 383372 CDS YP_001431554.1 156741425 5538914 1837550..1838569 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0728 protein of unknown function DUF820; hypothetical protein 1838569 5538914 Rcas_1441 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431554.1 1837550 D 383372 CDS YP_001431555.1 156741426 5538915 complement(1839113..1840699) 1 NC_009767.1 KEGG: rrs:RoseRS_2177 RNA polymerase, sigma 28 subunit, FliA/WhiG family; FliA/WhiG family RNA polymerase sigma 28 subunit 1840699 5538915 Rcas_1442 Roseiflexus castenholzii DSM 13941 FliA/WhiG family RNA polymerase sigma 28 subunit YP_001431555.1 1839113 R 383372 CDS YP_001431556.1 156741427 5538916 complement(1841175..1843607) 1 NC_009767.1 KEGG: rrs:RoseRS_2176 hypothetical protein; hypothetical protein 1843607 5538916 Rcas_1443 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431556.1 1841175 R 383372 CDS YP_001431557.1 156741428 5538917 complement(1843952..1844203) 1 NC_009767.1 KEGG: rrs:RoseRS_2176 hypothetical protein; hypothetical protein 1844203 5538917 Rcas_1444 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431557.1 1843952 R 383372 CDS YP_001431558.1 156741429 5538918 complement(1844613..1846547) 1 NC_009767.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rrs:RoseRS_2175 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1846547 5538918 Rcas_1445 Roseiflexus castenholzii DSM 13941 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001431558.1 1844613 R 383372 CDS YP_001431559.1 156741430 5538920 complement(1847318..1848025) 1 NC_009767.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rrs:RoseRS_3071 uncharacterized peroxidase-related enzyme; peroxidase-like protein 1848025 5538920 Rcas_1446 Roseiflexus castenholzii DSM 13941 peroxidase-like protein YP_001431559.1 1847318 R 383372 CDS YP_001431560.1 156741431 5538921 complement(1848921..1849778) 1 NC_009767.1 KEGG: rrs:RoseRS_2170 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein 1849778 5538921 Rcas_1447 Roseiflexus castenholzii DSM 13941 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein YP_001431560.1 1848921 R 383372 CDS YP_001431561.1 156741432 5538922 1849876..1851570 1 NC_009767.1 KEGG: rrs:RoseRS_2169 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1851570 5538922 Rcas_1448 Roseiflexus castenholzii DSM 13941 gamma-glutamyltransferase YP_001431561.1 1849876 D 383372 CDS YP_001431562.1 156741433 5538923 1851785..1852102 1 NC_009767.1 hypothetical protein 1852102 5538923 Rcas_1449 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431562.1 1851785 D 383372 CDS YP_001431563.1 156741434 5538924 1852364..1852885 1 NC_009767.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_2168 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 1852885 5538924 Rcas_1450 Roseiflexus castenholzii DSM 13941 hexapaptide repeat-containing transferase YP_001431563.1 1852364 D 383372 CDS YP_001431564.1 156741435 5538925 complement(1852864..1853697) 1 NC_009767.1 KEGG: rrs:RoseRS_2167 hypothetical protein; hypothetical protein 1853697 5538925 Rcas_1451 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431564.1 1852864 R 383372 CDS YP_001431565.1 156741436 5538926 1853846..1854736 1 NC_009767.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_2166 ATPase associated with various cellular activities, AAA_5; ATPase 1854736 5538926 Rcas_1452 Roseiflexus castenholzii DSM 13941 ATPase YP_001431565.1 1853846 D 383372 CDS YP_001431566.1 156741437 5538927 1854756..1855979 1 NC_009767.1 PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: rrs:RoseRS_2165 VWA containing CoxE family protein; von Willebrand factor A 1855979 5538927 Rcas_1453 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001431566.1 1854756 D 383372 CDS YP_001431567.1 156741438 5538928 1856216..1857385 1 NC_009767.1 SMART: extracellular solute-binding protein family 3; KEGG: rrs:RoseRS_4005 extracellular solute-binding protein, family 3; extracellular solute-binding protein 1857385 5538928 Rcas_1454 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001431567.1 1856216 D 383372 CDS YP_001431568.1 156741439 5538929 1857734..1858924 1 NC_009767.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4004 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 1858924 5538929 Rcas_1455 Roseiflexus castenholzii DSM 13941 polar amino acid ABC transporter inner membrane subunit YP_001431568.1 1857734 D 383372 CDS YP_001431569.1 156741440 5538930 1858927..1860138 1 NC_009767.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4003 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 1860138 5538930 Rcas_1456 Roseiflexus castenholzii DSM 13941 polar amino acid ABC transporter inner membrane subunit YP_001431569.1 1858927 D 383372 CDS YP_001431570.1 156741441 5538931 1860146..1860907 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4002 ABC transporter related; ABC transporter-like protein 1860907 5538931 Rcas_1457 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431570.1 1860146 D 383372 CDS YP_001431571.1 156741442 5538932 complement(1861003..1861383) 1 NC_009767.1 KEGG: rrs:RoseRS_4001 hypothetical protein; hypothetical protein 1861383 5538932 Rcas_1458 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431571.1 1861003 R 383372 CDS YP_001431572.1 156741443 5538933 1861819..1862832 1 NC_009767.1 PFAM: cytochrome oxidase assembly; KEGG: rrs:RoseRS_4134 cytochrome oxidase assembly; cytochrome oxidase assembly 1862832 5538933 Rcas_1459 Roseiflexus castenholzii DSM 13941 cytochrome oxidase assembly YP_001431572.1 1861819 D 383372 CDS YP_001431573.1 156741444 5538934 complement(1862905..1863330) 1 NC_009767.1 KEGG: rrs:RoseRS_4136 hypothetical protein; hypothetical protein 1863330 5538934 Rcas_1460 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431573.1 1862905 R 383372 CDS YP_001431574.1 156741445 5538935 1863351..1864250 1 NC_009767.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rrs:RoseRS_4137 arginase; arginase 1864250 5538935 Rcas_1461 Roseiflexus castenholzii DSM 13941 arginase YP_001431574.1 1863351 D 383372 CDS YP_001431575.1 156741446 5538936 1864782..1865462 1 NC_009767.1 KEGG: rrs:RoseRS_4139 hypothetical protein; hypothetical protein 1865462 5538936 Rcas_1462 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431575.1 1864782 D 383372 CDS YP_001431576.1 156741447 5538937 1865472..1868504 1 NC_009767.1 KEGG: rrs:RoseRS_4140 Fe-S-cluster-containing hydrogenase components 1-like protein; Fe-S-cluster-containing hydrogenase components 1-like protein 1868504 5538937 Rcas_1463 Roseiflexus castenholzii DSM 13941 Fe-S-cluster-containing hydrogenase components 1-like protein YP_001431576.1 1865472 D 383372 CDS YP_001431577.1 156741448 5538938 1868577..1869992 1 NC_009767.1 PFAM: Polysulphide reductase NrfD; KEGG: rrs:RoseRS_4141 polysulphide reductase, NrfD; polysulfide reductase NrfD 1869992 5538938 Rcas_1464 Roseiflexus castenholzii DSM 13941 polysulfide reductase NrfD YP_001431577.1 1868577 D 383372 CDS YP_001431578.1 156741449 5538939 1870006..1870584 1 NC_009767.1 KEGG: rrs:RoseRS_4142 hypothetical protein; hypothetical protein 1870584 5538939 Rcas_1465 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431578.1 1870006 D 383372 CDS YP_001431579.1 156741450 5538940 1870595..1871176 1 NC_009767.1 KEGG: rrs:RoseRS_4143 hypothetical protein; hypothetical protein 1871176 5538940 Rcas_1466 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431579.1 1870595 D 383372 CDS YP_001431580.1 156741451 5538941 1871282..1872526 1 NC_009767.1 KEGG: rrs:RoseRS_4144 hypothetical protein; hypothetical protein 1872526 5538941 Rcas_1467 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431580.1 1871282 D 383372 CDS YP_001431581.1 156741452 5538942 1873739..1874152 1 NC_009767.1 PFAM: transposase IS200-family protein; KEGG: rrs:RoseRS_0733 transposase IS200-family protein; transposase IS200-family protein 1874152 5538942 Rcas_1468 Roseiflexus castenholzii DSM 13941 transposase IS200-family protein YP_001431581.1 1873739 D 383372 CDS YP_001431582.1 156741453 5538943 complement(1875883..1878294) 1 NC_009767.1 PFAM: peptidase S45 penicillin amidase; KEGG: gvi:glr1988 probable penicillin amidase; peptidase S45 penicillin amidase 1878294 5538943 Rcas_1469 Roseiflexus castenholzii DSM 13941 peptidase S45 penicillin amidase YP_001431582.1 1875883 R 383372 CDS YP_001431583.1 156741454 5538944 1879392..1879682 1 NC_009767.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rpb:RPB_0452 prevent-host-death protein; prevent-host-death family protein 1879682 5538944 Rcas_1470 Roseiflexus castenholzii DSM 13941 prevent-host-death family protein YP_001431583.1 1879392 D 383372 CDS YP_001431584.1 156741455 5538945 1879750..1880091 1 NC_009767.1 KEGG: rsh:Rsph17029_2024 transposase IS3/IS911 family protein; hypothetical protein 1880091 5538945 Rcas_1471 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431584.1 1879750 D 383372 CDS YP_001431585.1 156741456 5538947 complement(1881414..1881695) 1 NC_009767.1 hypothetical protein 1881695 5538947 Rcas_1473 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431585.1 1881414 R 383372 CDS YP_001431586.1 156741457 5538949 complement(1882751..1883647) 1 NC_009767.1 KEGG: rrs:RoseRS_3664 methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase family 2; methylthioadenosine phosphorylase 1883647 5538949 Rcas_1474 Roseiflexus castenholzii DSM 13941 methylthioadenosine phosphorylase YP_001431586.1 1882751 R 383372 CDS YP_001431587.1 156741458 5538950 complement(1883666..1884976) 1 NC_009767.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1884976 clpX 5538950 clpX Roseiflexus castenholzii DSM 13941 ATP-dependent protease ATP-binding subunit ClpX YP_001431587.1 1883666 R 383372 CDS YP_001431588.1 156741459 5538951 complement(1884995..1885654) 1 NC_009767.1 PFAM: peptidase S14 ClpP; KEGG: rrs:RoseRS_3662 endopeptidase Clp; endopeptidase Clp 1885654 5538951 Rcas_1476 Roseiflexus castenholzii DSM 13941 endopeptidase Clp YP_001431588.1 1884995 R 383372 CDS YP_001431589.1 156741460 5538952 complement(1885660..1887180) 1 NC_009767.1 TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: rrs:RoseRS_3661 trigger factor; trigger factor 1887180 5538952 Rcas_1477 Roseiflexus castenholzii DSM 13941 trigger factor YP_001431589.1 1885660 R 383372 CDS YP_001431590.1 156741461 5538953 1887478..1891218 1 NC_009767.1 KEGG: rrs:RoseRS_3660 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 1891218 5538953 Rcas_1478 Roseiflexus castenholzii DSM 13941 transcription-repair coupling factor YP_001431590.1 1887478 D 383372 CDS YP_001431591.1 156741462 5538954 complement(1891290..1893005) 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3659 protein kinase; serine/threonine protein kinase 1893005 5538954 Rcas_1479 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001431591.1 1891290 R 383372 CDS YP_001431592.1 156741463 5538955 1893169..1893834 1 NC_009767.1 PFAM: Forkhead-associated protein; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3658 two component transcriptional regulator, winged helix family; winged helix family two component response transcriptional regulator 1893834 5538955 Rcas_1480 Roseiflexus castenholzii DSM 13941 winged helix family two component response transcriptional regulator YP_001431592.1 1893169 D 383372 CDS YP_001431593.1 156741464 5538956 1893908..1895203 1 NC_009767.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1895203 5538956 Rcas_1481 Roseiflexus castenholzii DSM 13941 3-phosphoshikimate 1-carboxyvinyltransferase YP_001431593.1 1893908 D 383372 CDS YP_001431594.1 156741465 5538957 1895311..1895901 1 NC_009767.1 KEGG: rrs:RoseRS_3656 hypothetical protein; hypothetical protein 1895901 5538957 Rcas_1482 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431594.1 1895311 D 383372 CDS YP_001431595.1 156741466 5538958 complement(1896032..1896859) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_3478 alpha/beta hydrolase fold; alpha/beta hydrolase 1896859 5538958 Rcas_1483 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001431595.1 1896032 R 383372 CDS YP_001431596.1 156741467 5538959 1897056..1897868 1 NC_009767.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: rrs:RoseRS_3477 CobB/CobQ domain protein glutamine amidotransferase; glutamine amidotransferase 1897868 5538959 Rcas_1484 Roseiflexus castenholzii DSM 13941 glutamine amidotransferase YP_001431596.1 1897056 D 383372 CDS YP_001431597.1 156741468 5538960 complement(1897926..1899029) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3476 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1899029 5538960 Rcas_1485 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001431597.1 1897926 R 383372 CDS YP_001431598.1 156741469 5538961 1899225..1900889 1 NC_009767.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3475 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1900889 5538961 Rcas_1486 Roseiflexus castenholzii DSM 13941 FAD dependent oxidoreductase YP_001431598.1 1899225 D 383372 CDS YP_001431599.1 156741470 5538962 1901497..1901898 1 NC_009767.1 KEGG: rrs:RoseRS_3474 hypothetical protein; hypothetical protein 1901898 5538962 Rcas_1487 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431599.1 1901497 D 383372 CDS YP_001431600.1 156741471 5538963 complement(1902527..1903810) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3472 glycosyl transferase, group 1; group 1 glycosyl transferase 1903810 5538963 Rcas_1488 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431600.1 1902527 R 383372 CDS YP_001431601.1 156741472 5538964 complement(1904023..1905210) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3471 glycosyl transferase, group 1; group 1 glycosyl transferase 1905210 5538964 Rcas_1489 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431601.1 1904023 R 383372 CDS YP_001431602.1 156741473 5538965 complement(1905207..1905449) 1 NC_009767.1 PFAM: protein of unknown function DUF970; KEGG: rrs:RoseRS_3470 protein of unknown function DUF970; hypothetical protein 1905449 5538965 Rcas_1490 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431602.1 1905207 R 383372 CDS YP_001431603.1 156741474 5538966 1905704..1906678 1 NC_009767.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: rrs:RoseRS_3469 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1906678 5538966 Rcas_1491 Roseiflexus castenholzii DSM 13941 malonyl CoA-acyl carrier protein transacylase YP_001431603.1 1905704 D 383372 CDS YP_001431604.1 156741475 5538967 1907036..1908307 1 NC_009767.1 PFAM: Beta-ketoacyl synthase; KEGG: rrs:RoseRS_3468 beta-ketoacyl synthase; beta-ketoacyl synthase 1908307 5538967 Rcas_1492 Roseiflexus castenholzii DSM 13941 beta-ketoacyl synthase YP_001431604.1 1907036 D 383372 CDS YP_001431605.1 156741476 5538968 complement(1909001..1909933) 1 NC_009767.1 KEGG: rrs:RoseRS_3467 hypothetical protein; hypothetical protein 1909933 5538968 Rcas_1493 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431605.1 1909001 R 383372 CDS YP_001431606.1 156741477 5538969 complement(1910060..1911334) 1 NC_009767.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1911334 5538969 Rcas_1494 Roseiflexus castenholzii DSM 13941 seryl-tRNA synthetase YP_001431606.1 1910060 R 383372 CDS YP_001431607.1 156741478 5538970 complement(1911347..1911838) 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3465 NUDIX hydrolase; NUDIX hydrolase 1911838 5538970 Rcas_1495 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001431607.1 1911347 R 383372 CDS YP_001431608.1 156741479 5538971 complement(1911869..1912393) 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3464 NUDIX hydrolase; NUDIX hydrolase 1912393 5538971 Rcas_1496 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001431608.1 1911869 R 383372 CDS YP_001431609.1 156741480 5538972 complement(1912838..1914466) 1 NC_009767.1 KEGG: rrs:RoseRS_3730 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1914466 5538972 Rcas_1497 Roseiflexus castenholzii DSM 13941 gamma-glutamyltransferase YP_001431609.1 1912838 R 383372 CDS YP_001431610.1 156741481 5538973 1914617..1915123 1 NC_009767.1 KEGG: rrs:RoseRS_3731 hypothetical protein; hypothetical protein 1915123 5538973 Rcas_1498 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431610.1 1914617 D 383372 CDS YP_001431611.1 156741482 5538974 1915133..1915999 1 NC_009767.1 PFAM: amidohydrolase 2; KEGG: rrs:RoseRS_3732 amidohydrolase 2; amidohydrolase 1915999 5538974 Rcas_1499 Roseiflexus castenholzii DSM 13941 amidohydrolase YP_001431611.1 1915133 D 383372 CDS YP_001431612.1 156741483 5538975 1916024..1916986 1 NC_009767.1 KEGG: rrs:RoseRS_3733 hypothetical protein; hypothetical protein 1916986 5538975 Rcas_1500 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431612.1 1916024 D 383372 CDS YP_001431613.1 156741484 5538976 1916983..1918545 1 NC_009767.1 PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: rrs:RoseRS_3734 glycoside hydrolase, family 57; hypothetical protein 1918545 5538976 Rcas_1501 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431613.1 1916983 D 383372 CDS YP_001431614.1 156741485 5538977 complement(1918778..1919119) 1 NC_009767.1 PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_3735 rhodanese domain protein; rhodanese domain-containing protein 1919119 5538977 Rcas_1502 Roseiflexus castenholzii DSM 13941 rhodanese domain-containing protein YP_001431614.1 1918778 R 383372 CDS YP_001431615.1 156741486 5538978 complement(1919151..1920602) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3736 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1920602 5538978 Rcas_1503 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001431615.1 1919151 R 383372 CDS YP_001431616.1 156741487 5538979 complement(1920599..1921294) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3737 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1921294 5538979 Rcas_1504 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001431616.1 1920599 R 383372 CDS YP_001431617.1 156741488 5538980 complement(1921433..1921984) 1 NC_009767.1 KEGG: rrs:RoseRS_3738 hypothetical protein; hypothetical protein 1921984 5538980 Rcas_1505 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431617.1 1921433 R 383372 CDS YP_001431618.1 156741489 5538982 1922446..1924830 1 NC_009767.1 KEGG: rrs:RoseRS_3739 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1924830 5538982 Rcas_1506 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001431618.1 1922446 D 383372 CDS YP_001431619.1 156741490 5538984 complement(1925343..1926038) 1 NC_009767.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: rrs:RoseRS_3740 peptidase, membrane zinc metallopeptidase; zinc metallopeptidase 1926038 5538984 Rcas_1508 Roseiflexus castenholzii DSM 13941 zinc metallopeptidase YP_001431619.1 1925343 R 383372 CDS YP_001431620.1 156741491 5538985 complement(1926082..1927587) 1 NC_009767.1 PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_3741 ABC-2 type transporter; ABC-2 type transporter 1927587 5538985 Rcas_1509 Roseiflexus castenholzii DSM 13941 ABC-2 type transporter YP_001431620.1 1926082 R 383372 CDS YP_001431621.1 156741492 5538986 complement(1927589..1928671) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3742 ABC transporter related; ABC transporter-like protein 1928671 5538986 Rcas_1510 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431621.1 1927589 R 383372 CDS YP_001431622.1 156741493 5538987 1929082..1930482 1 NC_009767.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: rrs:RoseRS_3743 amidophosphoribosyltransferase; amidophosphoribosyltransferase 1930482 5538987 Rcas_1511 Roseiflexus castenholzii DSM 13941 amidophosphoribosyltransferase YP_001431622.1 1929082 D 383372 CDS YP_001431623.1 156741494 5538988 1931195..1934113 1 NC_009767.1 KEGG: rrs:RoseRS_3415 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 1934113 5538988 Rcas_1512 Roseiflexus castenholzii DSM 13941 DNA polymerase I YP_001431623.1 1931195 D 383372 CDS YP_001431624.1 156741495 5538989 1934377..1935369 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3414 ribonuclease III; ribonuclease III 1935369 5538989 Rcas_1513 Roseiflexus castenholzii DSM 13941 ribonuclease III YP_001431624.1 1934377 D 383372 CDS YP_001431625.1 156741496 5538990 complement(1935384..1936169) 1 NC_009767.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: rrs:RoseRS_3413 biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 1936169 5538990 Rcas_1514 Roseiflexus castenholzii DSM 13941 biotin/lipoate A/B protein ligase YP_001431625.1 1935384 R 383372 CDS YP_001431626.1 156741497 5538991 complement(1936166..1936450) 1 NC_009767.1 KEGG: rrs:RoseRS_3412 hypothetical protein; hypothetical protein 1936450 5538991 Rcas_1515 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431626.1 1936166 R 383372 CDS YP_001431627.1 156741498 5538992 complement(1936683..1937060) 1 NC_009767.1 KEGG: ana:alr0758 hypothetical protein; transcriptional modulator of MazE/toxin MazF 1937060 5538992 Rcas_1516 Roseiflexus castenholzii DSM 13941 transcriptional modulator of MazE/toxin MazF YP_001431627.1 1936683 R 383372 CDS YP_001431628.1 156741499 5538993 complement(1937035..1937259) 1 NC_009767.1 hypothetical protein 1937259 5538993 Rcas_1517 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431628.1 1937035 R 383372 CDS YP_001431629.1 156741500 5538994 1937633..1938196 1 NC_009767.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1938196 5538994 Rcas_1518 Roseiflexus castenholzii DSM 13941 elongation factor P YP_001431629.1 1937633 D 383372 CDS YP_001431630.1 156741501 5538995 1938217..1939887 1 NC_009767.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: rrs:RoseRS_3410 carbohydrate kinase, YjeF related protein; carbohydrate kinase 1939887 5538995 Rcas_1519 Roseiflexus castenholzii DSM 13941 carbohydrate kinase YP_001431630.1 1938217 D 383372 CDS YP_001431631.1 156741502 5538996 1939902..1940687 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3408 protein of unknown function DUF820; hypothetical protein 1940687 5538996 Rcas_1520 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431631.1 1939902 D 383372 CDS YP_001431632.1 156741503 5538997 1940690..1941115 1 NC_009767.1 TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: rrs:RoseRS_3407 regulatory protein, FmdB family; FmdB family regulatory protein 1941115 5538997 Rcas_1521 Roseiflexus castenholzii DSM 13941 FmdB family regulatory protein YP_001431632.1 1940690 D 383372 CDS YP_001431633.1 156741504 5538998 1941956..1942552 1 NC_009767.1 KEGG: rrs:RoseRS_3406 hypothetical protein; hypothetical protein 1942552 5538998 Rcas_1522 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431633.1 1941956 D 383372 CDS YP_001431634.1 156741505 5538999 1942620..1942958 1 NC_009767.1 PFAM: Sterol-binding domain protein; KEGG: rrs:RoseRS_3405 hypothetical protein; sterol-binding domain-containing protein 1942958 5538999 Rcas_1523 Roseiflexus castenholzii DSM 13941 sterol-binding domain-containing protein YP_001431634.1 1942620 D 383372 CDS YP_001431635.1 156741506 5539000 complement(1942969..1943607) 1 NC_009767.1 PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_3404 signal transduction protein with CBS domains; signal transduction protein 1943607 5539000 Rcas_1524 Roseiflexus castenholzii DSM 13941 signal transduction protein YP_001431635.1 1942969 R 383372 CDS YP_001431636.1 156741507 5539001 complement(1943692..1944426) 1 NC_009767.1 PFAM: LmbE family protein; KEGG: rrs:RoseRS_3403 LmbE family protein; LmbE family protein 1944426 5539001 Rcas_1525 Roseiflexus castenholzii DSM 13941 LmbE family protein YP_001431636.1 1943692 R 383372 CDS YP_001431637.1 156741508 5539002 1945009..1945485 1 NC_009767.1 PFAM: ribosomal protein S6; KEGG: rrs:RoseRS_3402 ribosomal protein S6; 30S ribosomal protein S6 1945485 5539002 Rcas_1526 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S6 YP_001431637.1 1945009 D 383372 CDS YP_001431638.1 156741509 5539003 1945524..1945982 1 NC_009767.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rrs:RoseRS_3401 single-strand binding protein; single-strand binding protein 1945982 5539003 Rcas_1527 Roseiflexus castenholzii DSM 13941 single-strand binding protein YP_001431638.1 1945524 D 383372 CDS YP_001431639.1 156741510 5539004 1946003..1946275 1 NC_009767.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1946275 rpsR 5539004 rpsR Roseiflexus castenholzii DSM 13941 30S ribosomal protein S18 YP_001431639.1 1946003 D 383372 CDS YP_001431640.1 156741511 5539005 1946353..1947906 1 NC_009767.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rrs:RoseRS_3399 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1947906 5539005 Rcas_1529 Roseiflexus castenholzii DSM 13941 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001431640.1 1946353 D 383372 CDS YP_001431641.1 156741512 5539006 1949184..1950149 1 NC_009767.1 KEGG: rrs:RoseRS_3398 hypothetical protein; hypothetical protein 1950149 5539006 Rcas_1530 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431641.1 1949184 D 383372 CDS YP_001431642.1 156741513 5539007 complement(1950355..1951554) 1 NC_009767.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_3397 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1951554 5539007 Rcas_1531 Roseiflexus castenholzii DSM 13941 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001431642.1 1950355 R 383372 CDS YP_001431643.1 156741514 5539008 complement(1951569..1954430) 1 NC_009767.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 1954430 sucA 5539008 sucA Roseiflexus castenholzii DSM 13941 2-oxoglutarate dehydrogenase E1 YP_001431643.1 1951569 R 383372 CDS YP_001431644.1 156741515 5539009 1954822..1955847 1 NC_009767.1 PFAM: fatty acid desaturase; KEGG: rrs:RoseRS_3373 fatty acid desaturase; fatty acid desaturase 1955847 5539009 Rcas_1533 Roseiflexus castenholzii DSM 13941 fatty acid desaturase YP_001431644.1 1954822 D 383372 CDS YP_001431645.1 156741516 5539010 1956805..1958178 1 NC_009767.1 PFAM: PUCC protein; KEGG: rrs:RoseRS_1912 PucC protein; PUCC protein 1958178 5539010 Rcas_1534 Roseiflexus castenholzii DSM 13941 PUCC protein YP_001431645.1 1956805 D 383372 CDS YP_001431646.1 156741517 5539011 1958194..1958991 1 NC_009767.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1911 methyltransferase type 11; type 11 methyltransferase 1958991 5539011 Rcas_1535 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001431646.1 1958194 D 383372 CDS YP_001431647.1 156741518 5539012 1959149..1960393 1 NC_009767.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N 1960393 5539012 Rcas_1536 Roseiflexus castenholzii DSM 13941 light-independent protochlorophyllide reductase subunit N YP_001431647.1 1959149 D 383372 CDS YP_001431648.1 156741519 5539013 1961008..1962699 1 NC_009767.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B 1962699 5539013 Rcas_1537 Roseiflexus castenholzii DSM 13941 light-independent protochlorophyllide reductase subunit B YP_001431648.1 1961008 D 383372 CDS YP_001431649.1 156741520 5539014 1962720..1963541 1 NC_009767.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein 1963541 chlL 5539014 chlL Roseiflexus castenholzii DSM 13941 protochlorophyllide reductase iron-sulfur ATP-binding protein YP_001431649.1 1962720 D 383372 CDS YP_001431650.1 156741521 5539015 1963532..1964245 1 NC_009767.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase 1964245 5539015 Rcas_1539 Roseiflexus castenholzii DSM 13941 Mg-protoporphyrin IX methyl transferase YP_001431650.1 1963532 D 383372 CDS YP_001431651.1 156741522 5539016 1964474..1964803 1 NC_009767.1 KEGG: rrs:RoseRS_1906 hypothetical protein; hypothetical protein 1964803 5539016 Rcas_1540 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431651.1 1964474 D 383372 CDS YP_001431652.1 156741523 5539017 1964853..1965968 1 NC_009767.1 oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase 1965968 5539017 Rcas_1541 Roseiflexus castenholzii DSM 13941 magnesium-protoporphyrin IX monomethyl ester cyclase YP_001431652.1 1964853 D 383372 CDS YP_001431653.1 156741524 5539018 1966051..1969902 1 NC_009767.1 catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis; magnesium chelatase subunit H 1969902 5539018 Rcas_1542 Roseiflexus castenholzii DSM 13941 magnesium chelatase subunit H YP_001431653.1 1966051 D 383372 CDS YP_001431654.1 156741525 5539019 1969932..1971233 1 NC_009767.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1903 PucC protein; PUCC protein 1971233 5539019 Rcas_1543 Roseiflexus castenholzii DSM 13941 PUCC protein YP_001431654.1 1969932 D 383372 CDS YP_001431655.1 156741526 5539020 1971248..1972381 1 NC_009767.1 KEGG: rrs:RoseRS_1902 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; magnesium chelatase ATPase subunit I 1972381 5539020 Rcas_1544 Roseiflexus castenholzii DSM 13941 magnesium chelatase ATPase subunit I YP_001431655.1 1971248 D 383372 CDS YP_001431656.1 156741527 5539021 complement(1972431..1975265) 1 NC_009767.1 KEGG: rrs:RoseRS_1899 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DEXDc2; helicase c2; DNA polymerase III subunit epsilon 1975265 5539021 Rcas_1545 Roseiflexus castenholzii DSM 13941 DNA polymerase III subunit epsilon YP_001431656.1 1972431 R 383372 CDS YP_001431657.1 156741528 5539022 complement(1985596..1986717) 1 NC_009767.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1986717 5539022 Rcas_1546 Roseiflexus castenholzii DSM 13941 3-isopropylmalate dehydrogenase YP_001431657.1 1985596 R 383372 CDS YP_001431658.1 156741529 5539023 complement(1987146..1987622) 1 NC_009767.1 PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_1959 uncharacterized protein UPF0114; hypothetical protein 1987622 5539023 Rcas_1547 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431658.1 1987146 R 383372 CDS YP_001431659.1 156741530 5539024 complement(1987629..1988243) 1 NC_009767.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 1988243 leuD 5539024 leuD Roseiflexus castenholzii DSM 13941 isopropylmalate isomerase small subunit YP_001431659.1 1987629 R 383372 CDS YP_001431660.1 156741531 5539025 complement(1988333..1989751) 1 NC_009767.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1989751 5539025 Rcas_1549 Roseiflexus castenholzii DSM 13941 isopropylmalate isomerase large subunit YP_001431660.1 1988333 R 383372 CDS YP_001431661.1 156741532 5539026 complement(1989930..1990859) 1 NC_009767.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: rrs:RoseRS_1962 branched-chain amino acid aminotransferase; branched-chain amino acid aminotransferase 1990859 5539026 Rcas_1550 Roseiflexus castenholzii DSM 13941 branched-chain amino acid aminotransferase YP_001431661.1 1989930 R 383372 CDS YP_001431662.1 156741533 5539027 complement(1990917..1992527) 1 NC_009767.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rrs:RoseRS_1963 2-isopropylmalate synthase/homocitrate synthase family protein; alpha-isopropylmalate/homocitrate synthase family transferase 1992527 5539027 Rcas_1551 Roseiflexus castenholzii DSM 13941 alpha-isopropylmalate/homocitrate synthase family transferase YP_001431662.1 1990917 R 383372 CDS YP_001431663.1 156741534 5539028 complement(1992552..1993391) 1 NC_009767.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_1964 prephenate dehydratase; prephenate dehydratase 1993391 5539028 Rcas_1552 Roseiflexus castenholzii DSM 13941 prephenate dehydratase YP_001431663.1 1992552 R 383372 CDS YP_001431664.1 156741535 5539029 complement(1993618..1995288) 1 NC_009767.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rrs:RoseRS_1965 2-isopropylmalate synthase; 2-isopropylmalate synthase 1995288 5539029 Rcas_1553 Roseiflexus castenholzii DSM 13941 2-isopropylmalate synthase YP_001431664.1 1993618 R 383372 CDS YP_001431665.1 156741536 5539030 complement(1995519..1995929) 1 NC_009767.1 PFAM: S23 ribosomal protein; KEGG: cbo:CBO0737 hypothetical protein; 30S ribosomal protein S23 1995929 5539030 Rcas_1554 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S23 YP_001431665.1 1995519 R 383372 CDS YP_001431666.1 156741537 5539031 complement(1996237..1997259) 1 NC_009767.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1997259 5539031 Rcas_1555 Roseiflexus castenholzii DSM 13941 ketol-acid reductoisomerase YP_001431666.1 1996237 R 383372 CDS YP_001431667.1 156741538 5539032 complement(1997675..1998217) 1 NC_009767.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_1967 acetolactate synthase, small subunit; acetolactate synthase small subunit 1998217 5539032 Rcas_1556 Roseiflexus castenholzii DSM 13941 acetolactate synthase small subunit YP_001431667.1 1997675 R 383372 CDS YP_001431668.1 156741539 5539033 complement(1998236..1999981) 1 NC_009767.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rrs:RoseRS_1968 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 1999981 5539033 Rcas_1557 Roseiflexus castenholzii DSM 13941 acetolactate synthase large subunit YP_001431668.1 1998236 R 383372 CDS YP_001431669.1 156741540 5539034 complement(2000459..2001427) 1 NC_009767.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_1970 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 2001427 5539034 Rcas_1558 Roseiflexus castenholzii DSM 13941 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001431669.1 2000459 R 383372 CDS YP_001431670.1 156741541 5539035 complement(2001446..2002507) 1 NC_009767.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_1971 homoserine dehydrogenase; homoserine dehydrogenase 2002507 5539035 Rcas_1559 Roseiflexus castenholzii DSM 13941 homoserine dehydrogenase YP_001431670.1 2001446 R 383372 CDS YP_001431671.1 156741542 5539036 2002847..2003185 1 NC_009767.1 KEGG: rrs:RoseRS_1972 hypothetical protein; hypothetical protein 2003185 5539036 Rcas_1560 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431671.1 2002847 D 383372 CDS YP_001431672.1 156741543 5539037 2004133..2005035 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0918 protein of unknown function DUF820; hypothetical protein 2005035 5539037 Rcas_1561 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431672.1 2004133 D 383372 CDS YP_001431673.1 156741544 5539038 complement(2005093..2006271) 1 NC_009767.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2006271 5539038 Rcas_1562 Roseiflexus castenholzii DSM 13941 S-adenosylmethionine synthetase YP_001431673.1 2005093 R 383372 CDS YP_001431674.1 156741545 5539039 complement(2006276..2009836) 1 NC_009767.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0920 ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAD superfamily ATPase 2009836 5539039 Rcas_1563 Roseiflexus castenholzii DSM 13941 HAD superfamily ATPase YP_001431674.1 2006276 R 383372 CDS YP_001431675.1 156741546 5539040 complement(2009980..2010456) 1 NC_009767.1 KEGG: rrs:RoseRS_0921 hypothetical protein; hypothetical protein 2010456 5539040 Rcas_1564 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431675.1 2009980 R 383372 CDS YP_001431676.1 156741547 5539041 complement(2010466..2010735) 1 NC_009767.1 KEGG: rrs:RoseRS_0922 hypothetical protein; hypothetical protein 2010735 5539041 Rcas_1565 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431676.1 2010466 R 383372 CDS YP_001431677.1 156741548 5539042 complement(2011196..2011756) 1 NC_009767.1 KEGG: rrs:RoseRS_0923 hypothetical protein; hypothetical protein 2011756 5539042 Rcas_1566 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431677.1 2011196 R 383372 CDS YP_001431678.1 156741549 5539043 2011958..2013151 1 NC_009767.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rrs:RoseRS_0924 transcriptional regulator, GntR family; GntR family transcriptional regulator 2013151 5539043 Rcas_1567 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001431678.1 2011958 D 383372 CDS YP_001431679.1 156741550 5539044 2013176..2014882 1 NC_009767.1 PFAM: thymidylate synthase complementing protein ThyX; KEGG: rrs:RoseRS_0926 thymidylate synthase complementing protein ThyX; thymidylate synthase complementing protein ThyX 2014882 5539044 Rcas_1568 Roseiflexus castenholzii DSM 13941 thymidylate synthase complementing protein ThyX YP_001431679.1 2013176 D 383372 CDS YP_001431680.1 156741551 5539045 2016681..2019101 1 NC_009767.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_0927 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 2019101 5539045 Rcas_1569 Roseiflexus castenholzii DSM 13941 peptidase S8/S53 subtilisin kexin sedolisin YP_001431680.1 2016681 D 383372 CDS YP_001431681.1 156741552 5539046 2019216..2020406 1 NC_009767.1 KEGG: rrs:RoseRS_0928 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 2020406 5539046 Rcas_1570 Roseiflexus castenholzii DSM 13941 arsenite-activated ATPase ArsA YP_001431681.1 2019216 D 383372 CDS YP_001431682.1 156741553 5539047 2020440..2020757 1 NC_009767.1 PFAM: protein of unknown function DUF59; KEGG: rrs:RoseRS_0929 protein of unknown function DUF59; hypothetical protein 2020757 5539047 Rcas_1571 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431682.1 2020440 D 383372 CDS YP_001431683.1 156741554 5539048 2021006..2021758 1 NC_009767.1 PFAM: electron transport protein SCO1/SenC; KEGG: rrs:RoseRS_0931 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 2021758 5539048 Rcas_1572 Roseiflexus castenholzii DSM 13941 electron transport protein SCO1/SenC YP_001431683.1 2021006 D 383372 CDS YP_001431684.1 156741555 5539049 2021935..2022105 1 NC_009767.1 KEGG: rrs:RoseRS_0932 hypothetical protein; hypothetical protein 2022105 5539049 Rcas_1573 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431684.1 2021935 D 383372 CDS YP_001431685.1 156741556 5539050 2022102..2022608 1 NC_009767.1 PFAM: blue (type 1) copper domain protein; cytochrome c oxidase subunit II; KEGG: rrs:RoseRS_0933 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 2022608 5539050 Rcas_1574 Roseiflexus castenholzii DSM 13941 cytochrome c oxidase subunit II YP_001431685.1 2022102 D 383372 CDS YP_001431686.1 156741557 5539051 2022658..2024343 1 NC_009767.1 PFAM: cytochrome c oxidase subunit I; KEGG: rrs:RoseRS_0934 cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 2024343 5539051 Rcas_1575 Roseiflexus castenholzii DSM 13941 cytochrome c oxidase subunit I YP_001431686.1 2022658 D 383372 CDS YP_001431687.1 156741558 5539052 2024700..2026982 1 NC_009767.1 PFAM: peptidase domain protein; KEGG: rrs:RoseRS_0935 peptidase domain protein; peptidase domain-containing protein 2026982 5539052 Rcas_1576 Roseiflexus castenholzii DSM 13941 peptidase domain-containing protein YP_001431687.1 2024700 D 383372 CDS YP_001431688.1 156741559 5539053 2027037..2027396 1 NC_009767.1 PFAM: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0936 helix-turn-helix domain protein; XRE family transcriptional regulator 2027396 5539053 Rcas_1577 Roseiflexus castenholzii DSM 13941 XRE family transcriptional regulator YP_001431688.1 2027037 D 383372 CDS YP_001431689.1 156741560 5539054 2027368..2029155 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_0937 extracellular solute-binding protein, family 5; extracellular solute-binding protein 2029155 5539054 Rcas_1578 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001431689.1 2027368 D 383372 CDS YP_001431690.1 156741561 5539055 complement(2029200..2029928) 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rrs:RoseRS_0938 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2029928 5539055 Rcas_1579 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001431690.1 2029200 R 383372 CDS YP_001431691.1 156741562 5539056 complement(2029934..2030983) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_0939 histidine kinase; histidine kinase 2030983 5539056 Rcas_1580 Roseiflexus castenholzii DSM 13941 histidine kinase YP_001431691.1 2029934 R 383372 CDS YP_001431692.1 156741563 5539057 complement(2031153..2031407) 1 NC_009767.1 KEGG: mxa:MXAN_4618 hypothetical protein; hypothetical protein 2031407 5539057 Rcas_1581 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431692.1 2031153 R 383372 CDS YP_001431693.1 156741564 5539058 2032021..2032626 1 NC_009767.1 TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; KEGG: rrs:RoseRS_0940 bacteriochlorophyll 4-vinyl reductase; bacteriochlorophyll 4-vinyl reductase 2032626 5539058 Rcas_1582 Roseiflexus castenholzii DSM 13941 bacteriochlorophyll 4-vinyl reductase YP_001431693.1 2032021 D 383372 CDS YP_001431694.1 156741565 5539059 2032707..2033801 1 NC_009767.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_0941 radical SAM domain protein; radical SAM domain-containing protein 2033801 5539059 Rcas_1583 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001431694.1 2032707 D 383372 CDS YP_001431695.1 156741566 5539060 2033814..2035397 1 NC_009767.1 KEGG: rrs:RoseRS_0942 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 2035397 5539060 Rcas_1584 Roseiflexus castenholzii DSM 13941 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase YP_001431695.1 2033814 D 383372 CDS YP_001431696.1 156741567 5539061 2035612..2037090 1 NC_009767.1 TIGRFAM: Zeta-phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0943 phytoene dehydrogenase-related protein; zeta-phytoene desaturase 2037090 5539061 Rcas_1585 Roseiflexus castenholzii DSM 13941 zeta-phytoene desaturase YP_001431696.1 2035612 D 383372 CDS YP_001431697.1 156741568 5539062 2037472..2038305 1 NC_009767.1 KEGG: rrs:RoseRS_0944 Zn-dependent hydrolase of the beta-lactamase fold-like protein; Zn-dependent hydrolase 2038305 5539062 Rcas_1586 Roseiflexus castenholzii DSM 13941 Zn-dependent hydrolase YP_001431697.1 2037472 D 383372 CDS YP_001431698.1 156741569 5539063 complement(2039956..2040855) 1 NC_009767.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: rrs:RoseRS_0945 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase 2040855 5539063 Rcas_1587 Roseiflexus castenholzii DSM 13941 intradiol ring-cleavage dioxygenase YP_001431698.1 2039956 R 383372 CDS YP_001431699.1 156741570 5539064 2041273..2043000 1 NC_009767.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: rrs:RoseRS_2067 L-lactate transport; L-lactate transport 2043000 5539064 Rcas_1588 Roseiflexus castenholzii DSM 13941 L-lactate transport YP_001431699.1 2041273 D 383372 CDS YP_001431700.1 156741571 5539065 complement(2043025..2043870) 1 NC_009767.1 PFAM: transport system permease; ABC-3 protein; KEGG: rrs:RoseRS_1256 ABC-3 protein; ABC-3 protein 2043870 5539065 Rcas_1589 Roseiflexus castenholzii DSM 13941 ABC-3 protein YP_001431700.1 2043025 R 383372 CDS YP_001431701.1 156741572 5539066 complement(2043897..2044685) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1257 ABC transporter related; ABC transporter-like protein 2044685 5539066 Rcas_1590 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431701.1 2043897 R 383372 CDS YP_001431702.1 156741573 5539067 complement(2044682..2046175) 1 NC_009767.1 PFAM: periplasmic solute binding protein; KEGG: rrs:RoseRS_1258 periplasmic solute binding protein; periplasmic solute binding protein 2046175 5539067 Rcas_1591 Roseiflexus castenholzii DSM 13941 periplasmic solute binding protein YP_001431702.1 2044682 R 383372 CDS YP_001431703.1 156741574 5539068 2046416..2047831 1 NC_009767.1 PFAM: SH3 type 3 domain protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_1259 protein kinase; serine/threonine protein kinase 2047831 5539068 Rcas_1592 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001431703.1 2046416 D 383372 CDS YP_001431704.1 156741575 5539069 2047943..2048689 1 NC_009767.1 PFAM: Silent information regulator protein Sir2; KEGG: rrs:RoseRS_1260 silent information regulator protein Sir2; silent information regulator protein Sir2 2048689 5539069 Rcas_1593 Roseiflexus castenholzii DSM 13941 silent information regulator protein Sir2 YP_001431704.1 2047943 D 383372 CDS YP_001431705.1 156741576 5539070 2048736..2049515 1 NC_009767.1 PFAM: Silent information regulator protein Sir2; KEGG: rrs:RoseRS_1261 silent information regulator protein Sir2; silent information regulator protein Sir2 2049515 5539070 Rcas_1594 Roseiflexus castenholzii DSM 13941 silent information regulator protein Sir2 YP_001431705.1 2048736 D 383372 CDS YP_001431706.1 156741577 5539071 2049537..2050157 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_1262 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2050157 5539071 Rcas_1595 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001431706.1 2049537 D 383372 CDS YP_001431707.1 156741578 5539072 2050150..2050800 1 NC_009767.1 KEGG: rrs:RoseRS_1263 hypothetical protein; hypothetical protein 2050800 5539072 Rcas_1596 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431707.1 2050150 D 383372 CDS YP_001431708.1 156741579 5539073 complement(2051203..2055711) 1 NC_009767.1 KEGG: rrs:RoseRS_1264 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 2055711 5539073 Rcas_1597 Roseiflexus castenholzii DSM 13941 DNA-directed RNA polymerase subunit beta' YP_001431708.1 2051203 R 383372 CDS YP_001431709.1 156741580 5539074 complement(2055798..2059535) 1 NC_009767.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 2059535 rpoB 5539074 rpoB Roseiflexus castenholzii DSM 13941 DNA-directed RNA polymerase subunit beta YP_001431709.1 2055798 R 383372 CDS YP_001431710.1 156741581 5539075 complement(2059827..2060813) 1 NC_009767.1 KEGG: ade:Adeh_1681 PE-PGRS family protein; hypothetical protein 2060813 5539075 Rcas_1599 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431710.1 2059827 R 383372 CDS YP_001431711.1 156741582 5539076 complement(2060967..2061182) 1 NC_009767.1 hypothetical protein 2061182 5539076 Rcas_1600 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431711.1 2060967 R 383372 CDS YP_001431712.1 156741583 5539078 complement(2063058..2066066) 1 NC_009767.1 KEGG: rrs:RoseRS_2919 protein of unknown function DUF323; signal transduction protein 2066066 5539078 Rcas_1602 Roseiflexus castenholzii DSM 13941 signal transduction protein YP_001431712.1 2063058 R 383372 CDS YP_001431713.1 156741584 5539079 complement(2066112..2066567) 1 NC_009767.1 KEGG: ter:Tery_1841 peptidase C14, caspase catalytic subunit P20; hypothetical protein 2066567 5539079 Rcas_1603 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431713.1 2066112 R 383372 CDS YP_001431714.1 156741585 5539080 complement(2066571..2067188) 1 NC_009767.1 KEGG: ter:Tery_1841 peptidase C14, caspase catalytic subunit P20; peptidase C14, caspase catalytic subunit P20 2067188 5539080 Rcas_1604 Roseiflexus castenholzii DSM 13941 peptidase C14, caspase catalytic subunit P20 YP_001431714.1 2066571 R 383372 CDS YP_001431715.1 156741586 5539081 complement(2067227..2069791) 1 NC_009767.1 KEGG: rrs:RoseRS_0237 ATPase (AAA+ superfamily)-like protein; ATPase AAA 2069791 5539081 Rcas_1605 Roseiflexus castenholzii DSM 13941 ATPase AAA YP_001431715.1 2067227 R 383372 CDS YP_001431716.1 156741587 5539082 complement(2069909..2071069) 1 NC_009767.1 PFAM: AAA-4 family protein; KEGG: rrs:RoseRS_1735 transcriptional regulator; transcriptional regulator 2071069 5539082 Rcas_1606 Roseiflexus castenholzii DSM 13941 transcriptional regulator YP_001431716.1 2069909 R 383372 CDS YP_001431717.1 156741588 5539083 complement(2071069..2073798) 1 NC_009767.1 KEGG: rrs:RoseRS_1734 SMC domain protein; SMC domain-containing protein 2073798 5539083 Rcas_1607 Roseiflexus castenholzii DSM 13941 SMC domain-containing protein YP_001431717.1 2071069 R 383372 CDS YP_001431718.1 156741589 5539084 complement(2073863..2077702) 1 NC_009767.1 PFAM: protein of unknown function DUF559; protein of unknown function DUF1156; KEGG: rrs:RoseRS_0239 protein of unknown function DUF1156; hypothetical protein 2077702 5539084 Rcas_1608 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431718.1 2073863 R 383372 CDS YP_001431719.1 156741590 5539085 complement(2077699..2081088) 1 NC_009767.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_0240 helicase domain protein; helicase 2081088 5539085 Rcas_1609 Roseiflexus castenholzii DSM 13941 helicase YP_001431719.1 2077699 R 383372 CDS YP_001431720.1 156741591 5539086 complement(2081493..2082197) 1 NC_009767.1 PFAM: Domain of unknown function DUF1814; KEGG: gsu:GSU1368 hypothetical protein; hypothetical protein 2082197 5539086 Rcas_1610 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431720.1 2081493 R 383372 CDS YP_001431721.1 156741592 5539087 complement(2082194..2082835) 1 NC_009767.1 KEGG: cph:Cpha266_1225 hypothetical protein; hypothetical protein 2082835 5539087 Rcas_1611 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431721.1 2082194 R 383372 CDS YP_001431722.1 156741593 5539088 complement(2082822..2083442) 1 NC_009767.1 KEGG: gvi:gll3649 hypothetical protein; hypothetical protein 2083442 5539088 Rcas_1612 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431722.1 2082822 R 383372 CDS YP_001431723.1 156741594 5539089 complement(2083360..2084730) 1 NC_009767.1 hypothetical protein 2084730 5539089 Rcas_1613 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431723.1 2083360 R 383372 CDS YP_001431724.1 156741595 5539090 complement(2084730..2085590) 1 NC_009767.1 KEGG: sth:STH816 methylthioribose-1-phosphate isomerase; hypothetical protein 2085590 5539090 Rcas_1614 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431724.1 2084730 R 383372 CDS YP_001431725.1 156741596 5539091 complement(2085663..2086022) 1 NC_009767.1 KEGG: rrs:RoseRS_1328 hypothetical protein; hypothetical protein 2086022 5539091 Rcas_1615 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431725.1 2085663 R 383372 CDS YP_001431726.1 156741597 5539092 complement(2086000..2086590) 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_1329 NUDIX hydrolase; NUDIX hydrolase 2086590 5539092 Rcas_1616 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001431726.1 2086000 R 383372 CDS YP_001431727.1 156741598 5539093 complement(2086594..2088651) 1 NC_009767.1 PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: rrs:RoseRS_1330 shikimate/quinate 5-dehydrogenase; shikimate/quinate 5-dehydrogenase 2088651 5539093 Rcas_1617 Roseiflexus castenholzii DSM 13941 shikimate/quinate 5-dehydrogenase YP_001431727.1 2086594 R 383372 CDS YP_001431728.1 156741599 5539094 complement(2089444..2091711) 1 NC_009767.1 KEGG: rrs:RoseRS_1331 hypothetical protein; hypothetical protein 2091711 5539094 Rcas_1618 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431728.1 2089444 R 383372 CDS YP_001431729.1 156741600 5539095 2091824..2093638 1 NC_009767.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2093638 5539095 Rcas_1619 Roseiflexus castenholzii DSM 13941 GTP-binding protein LepA YP_001431729.1 2091824 D 383372 CDS YP_001431730.1 156741601 5539096 2093683..2094696 1 NC_009767.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: rrs:RoseRS_1333 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2094696 5539096 Rcas_1620 Roseiflexus castenholzii DSM 13941 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001431730.1 2093683 D 383372 CDS YP_001431731.1 156741602 5539097 2094693..2096213 1 NC_009767.1 TIGRFAM: MazG family protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; MazG nucleotide pyrophosphohydrolase; KEGG: rrs:RoseRS_1334 MazG family protein; MazG family protein 2096213 5539097 Rcas_1621 Roseiflexus castenholzii DSM 13941 MazG family protein YP_001431731.1 2094693 D 383372 CDS YP_001431732.1 156741603 5539098 2096200..2096448 1 NC_009767.1 PFAM: protein of unknown function DUF951; KEGG: rrs:RoseRS_1335 protein of unknown function DUF951; hypothetical protein 2096448 5539098 Rcas_1622 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431732.1 2096200 D 383372 CDS YP_001431733.1 156741604 5539099 2096543..2097937 1 NC_009767.1 PFAM: protein of unknown function DUF107; KEGG: rrs:RoseRS_1336 protein of unknown function DUF107; hypothetical protein 2097937 5539099 Rcas_1623 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431733.1 2096543 D 383372 CDS YP_001431734.1 156741605 5539100 2097953..2098798 1 NC_009767.1 PFAM: band 7 protein; KEGG: rrs:RoseRS_1337 band 7 protein; hypothetical protein 2098798 5539100 Rcas_1624 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431734.1 2097953 D 383372 CDS YP_001431735.1 156741606 5539101 complement(2098786..2099568) 1 NC_009767.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1338 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2099568 5539101 Rcas_1625 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431735.1 2098786 R 383372 CDS YP_001431736.1 156741607 5539102 complement(2099645..2100949) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1339 glycosyl transferase, group 1; group 1 glycosyl transferase 2100949 5539102 Rcas_1626 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431736.1 2099645 R 383372 CDS YP_001431737.1 156741608 5539103 complement(2100952..2102250) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1340 glycosyl transferase, group 1; group 1 glycosyl transferase 2102250 5539103 Rcas_1627 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431737.1 2100952 R 383372 CDS YP_001431738.1 156741609 5539104 2102352..2103071 1 NC_009767.1 KEGG: rrs:RoseRS_1341 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 2103071 5539104 Rcas_1628 Roseiflexus castenholzii DSM 13941 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_001431738.1 2102352 D 383372 CDS YP_001431739.1 156741610 5539105 2103540..2104376 1 NC_009767.1 PFAM: ExsB family protein; PP-loop domain protein; KEGG: rrs:RoseRS_1342 ExsB family protein; PP-loop domain-containing protein 2104376 5539105 Rcas_1629 Roseiflexus castenholzii DSM 13941 PP-loop domain-containing protein YP_001431739.1 2103540 D 383372 CDS YP_001431740.1 156741611 5539106 complement(2104916..2105581) 1 NC_009767.1 KEGG: mem:Memar_0392 hypothetical protein; hypothetical protein 2105581 5539106 Rcas_1630 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431740.1 2104916 R 383372 CDS YP_001431741.1 156741612 5539107 2107875..2108945 1 NC_009767.1 PFAM: basic membrane lipoprotein; KEGG: rrs:RoseRS_1320 basic membrane lipoprotein; basic membrane lipoprotein 2108945 5539107 Rcas_1631 Roseiflexus castenholzii DSM 13941 basic membrane lipoprotein YP_001431741.1 2107875 D 383372 CDS YP_001431742.1 156741613 5539108 2109168..2110283 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_1319 inner-membrane translocator; inner-membrane translocator 2110283 5539108 Rcas_1632 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001431742.1 2109168 D 383372 CDS YP_001431743.1 156741614 5539109 2110295..2111335 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_1318 inner-membrane translocator; inner-membrane translocator 2111335 5539109 Rcas_1633 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001431743.1 2110295 D 383372 CDS YP_001431744.1 156741615 5539110 2111332..2112915 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1317 ABC transporter related; ABC transporter-like protein 2112915 5539110 Rcas_1634 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431744.1 2111332 D 383372 CDS YP_001431745.1 156741616 5539111 complement(2112906..2114273) 1 NC_009767.1 KEGG: rrs:RoseRS_1316 nicotinic acid phosphoribosyltransferase-like protein; nicotinic acid phosphoribosyltransferase-like protein 2114273 5539111 Rcas_1635 Roseiflexus castenholzii DSM 13941 nicotinic acid phosphoribosyltransferase-like protein YP_001431745.1 2112906 R 383372 CDS YP_001431746.1 156741617 5539112 2114585..2114827 1 NC_009767.1 PFAM: protein of unknown function DUF433; KEGG: rrs:RoseRS_2492 protein of unknown function DUF433; hypothetical protein 2114827 5539112 Rcas_1636 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431746.1 2114585 D 383372 CDS YP_001431747.1 156741618 5539113 2114811..2115179 1 NC_009767.1 KEGG: ava:Ava_2494 hypothetical protein; hypothetical protein 2115179 5539113 Rcas_1637 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431747.1 2114811 D 383372 CDS YP_001431748.1 156741619 5539114 2115516..2115770 1 NC_009767.1 KEGG: rrs:RoseRS_1315 hypothetical protein; hypothetical protein 2115770 5539114 Rcas_1638 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431748.1 2115516 D 383372 CDS YP_001431749.1 156741620 5539115 complement(2115730..2116266) 1 NC_009767.1 KEGG: rrs:RoseRS_1314 hypothetical protein; hypothetical protein 2116266 5539115 Rcas_1639 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431749.1 2115730 R 383372 CDS YP_001431750.1 156741621 5539116 complement(2116268..2117209) 1 NC_009767.1 KEGG: rrs:RoseRS_1313 hypothetical protein; hypothetical protein 2117209 5539116 Rcas_1640 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431750.1 2116268 R 383372 CDS YP_001431751.1 156741622 5539117 complement(2117216..2119537) 1 NC_009767.1 PFAM: PHP domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_1312 AAA-4 family protein; ATPase AAA 2119537 5539117 Rcas_1641 Roseiflexus castenholzii DSM 13941 ATPase AAA YP_001431751.1 2117216 R 383372 CDS YP_001431752.1 156741623 5539118 2119980..2120315 1 NC_009767.1 KEGG: rrs:RoseRS_1311 hypothetical protein; hypothetical protein 2120315 5539118 Rcas_1642 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431752.1 2119980 D 383372 CDS YP_001431753.1 156741624 5539119 complement(2120335..2121132) 1 NC_009767.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_1310 HAD-superfamily hydrolase, subfamily IIA; HAD family hydrolase 2121132 5539119 Rcas_1643 Roseiflexus castenholzii DSM 13941 HAD family hydrolase YP_001431753.1 2120335 R 383372 CDS YP_001431754.1 156741625 5539120 complement(2121142..2123064) 1 NC_009767.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2123064 argS 5539120 argS Roseiflexus castenholzii DSM 13941 arginyl-tRNA synthetase YP_001431754.1 2121142 R 383372 CDS YP_001431755.1 156741626 5539121 2123493..2126213 1 NC_009767.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Cache domain protein; KEGG: rrs:RoseRS_1308 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 2126213 5539121 Rcas_1645 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001431755.1 2123493 D 383372 CDS YP_001431756.1 156741627 5539122 2126210..2127385 1 NC_009767.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1307 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 2127385 5539122 Rcas_1646 Roseiflexus castenholzii DSM 13941 response regulator receiver sensor signal transduction histidine kinase YP_001431756.1 2126210 D 383372 CDS YP_001431757.1 156741628 5539123 complement(2127360..2128802) 1 NC_009767.1 PFAM: cell cycle protein; KEGG: rrs:RoseRS_1306 cell cycle protein; cell cycle protein 2128802 5539123 Rcas_1647 Roseiflexus castenholzii DSM 13941 cell cycle protein YP_001431757.1 2127360 R 383372 CDS YP_001431758.1 156741629 5539124 complement(2128778..2129860) 1 NC_009767.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2129860 5539124 Rcas_1648 Roseiflexus castenholzii DSM 13941 GTP-dependent nucleic acid-binding protein EngD YP_001431758.1 2128778 R 383372 CDS YP_001431759.1 156741630 5539125 complement(2130122..2130571) 1 NC_009767.1 PFAM: ferric-uptake regulator; KEGG: rrs:RoseRS_1293 ferric uptake regulator, Fur family; ferric uptake regulator family protein 2130571 5539125 Rcas_1649 Roseiflexus castenholzii DSM 13941 ferric uptake regulator family protein YP_001431759.1 2130122 R 383372 CDS YP_001431760.1 156741631 5539126 2130710..2131360 1 NC_009767.1 KEGG: rrs:RoseRS_1294 hypothetical protein; hypothetical protein 2131360 5539126 Rcas_1650 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431760.1 2130710 D 383372 CDS YP_001431761.1 156741632 5539127 2131461..2132153 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_1295 NUDIX hydrolase; NUDIX hydrolase 2132153 5539127 Rcas_1651 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001431761.1 2131461 D 383372 CDS YP_001431762.1 156741633 5539128 2132171..2132416 1 NC_009767.1 KEGG: rrs:RoseRS_1296 hypothetical protein; hypothetical protein 2132416 5539128 Rcas_1652 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431762.1 2132171 D 383372 CDS YP_001431763.1 156741634 5539129 2132463..2134946 1 NC_009767.1 PFAM: peptidase S45 penicillin amidase; KEGG: rrs:RoseRS_1297 peptidase S45, penicillin amidase; peptidase S45 penicillin amidase 2134946 5539129 Rcas_1653 Roseiflexus castenholzii DSM 13941 peptidase S45 penicillin amidase YP_001431763.1 2132463 D 383372 CDS YP_001431764.1 156741635 5539130 2134943..2135440 1 NC_009767.1 PFAM: protein of unknown function DUF427; KEGG: rrs:RoseRS_1298 protein of unknown function DUF427; hypothetical protein 2135440 5539130 Rcas_1654 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431764.1 2134943 D 383372 CDS YP_001431765.1 156741636 5539131 complement(2135409..2136275) 1 NC_009767.1 TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine phosphorylase family 2; KEGG: rrs:RoseRS_1299 inosine guanosine and xanthosine phosphorylase family; inosine guanosine and xanthosine phosphorylase family protein 2136275 5539131 Rcas_1655 Roseiflexus castenholzii DSM 13941 inosine guanosine and xanthosine phosphorylase family protein YP_001431765.1 2135409 R 383372 CDS YP_001431766.1 156741637 5539132 complement(2136317..2137006) 1 NC_009767.1 PFAM: membrane-flanked domain; KEGG: rrs:RoseRS_1300 membrane-flanked domain; hypothetical protein 2137006 5539132 Rcas_1656 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431766.1 2136317 R 383372 CDS YP_001431767.1 156741638 5539133 complement(2136993..2137793) 1 NC_009767.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: rrs:RoseRS_1301 DNA repair protein RecO; DNA repair protein RecO 2137793 5539133 Rcas_1657 Roseiflexus castenholzii DSM 13941 DNA repair protein RecO YP_001431767.1 2136993 R 383372 CDS YP_001431768.1 156741639 5539134 complement(2137895..2139112) 1 NC_009767.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2139112 tgt 5539134 tgt Roseiflexus castenholzii DSM 13941 queuine tRNA-ribosyltransferase YP_001431768.1 2137895 R 383372 CDS YP_001431769.1 156741640 5539135 complement(2139204..2140718) 1 NC_009767.1 KEGG: rrs:RoseRS_1303 hypothetical protein; hypothetical protein 2140718 5539135 Rcas_1659 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431769.1 2139204 R 383372 CDS YP_001431770.1 156741641 5539136 complement(2140753..2141355) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1304 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 2141355 5539136 Rcas_1660 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001431770.1 2140753 R 383372 CDS YP_001431771.1 156741642 5539137 complement(2142358..2143113) 1 NC_009767.1 PFAM: DSBA oxidoreductase; KEGG: rrs:RoseRS_1292 DsbA oxidoreductase; DSBA oxidoreductase 2143113 5539137 Rcas_1661 Roseiflexus castenholzii DSM 13941 DSBA oxidoreductase YP_001431771.1 2142358 R 383372 CDS YP_001431772.1 156741643 5539138 2143157..2144194 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1291 glycosyl transferase, family 2; glycosyl transferase family protein 2144194 5539138 Rcas_1662 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431772.1 2143157 D 383372 CDS YP_001431773.1 156741644 5539139 complement(2144150..2144827) 1 NC_009767.1 PFAM: phosphatidylserine decarboxylase-related; KEGG: rrs:RoseRS_1290 phosphatidylserine decarboxylase-like protein; phosphatidylserine decarboxylase 2144827 5539139 Rcas_1663 Roseiflexus castenholzii DSM 13941 phosphatidylserine decarboxylase YP_001431773.1 2144150 R 383372 CDS YP_001431774.1 156741645 5539140 complement(2144872..2145408) 1 NC_009767.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: rrs:RoseRS_1289 16S rRNA processing protein RimM; 16S rRNA-processing protein RimM 2145408 5539140 Rcas_1664 Roseiflexus castenholzii DSM 13941 16S rRNA-processing protein RimM YP_001431774.1 2144872 R 383372 CDS YP_001431775.1 156741646 5539141 complement(2145413..2145640) 1 NC_009767.1 KEGG: rrs:RoseRS_1288 RNA-binding protein (contains KH domain)-like protein; RNA-binding protein 2145640 5539141 Rcas_1665 Roseiflexus castenholzii DSM 13941 RNA-binding protein YP_001431775.1 2145413 R 383372 CDS YP_001431776.1 156741647 5539142 complement(2145647..2145928) 1 NC_009767.1 PFAM: ribosomal protein S16; KEGG: rrs:RoseRS_1287 ribosomal protein S16; 30S ribosomal protein S16 2145928 5539142 Rcas_1666 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S16 YP_001431776.1 2145647 R 383372 CDS YP_001431777.1 156741648 5539143 complement(2145958..2147292) 1 NC_009767.1 KEGG: rrs:RoseRS_1286 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 2147292 5539143 Rcas_1667 Roseiflexus castenholzii DSM 13941 signal recognition particle protein YP_001431777.1 2145958 R 383372 CDS YP_001431778.1 156741649 5539144 complement(2147527..2148978) 1 NC_009767.1 PFAM: protein of unknown function DUF95 transmembrane; ABC-2 type transporter; KEGG: rrs:RoseRS_1285 protein of unknown function DUF95, transmembrane; hypothetical protein 2148978 5539144 Rcas_1668 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431778.1 2147527 R 383372 CDS YP_001431779.1 156741650 5539145 complement(2149112..2150128) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1284 ABC transporter related; ABC transporter-like protein 2150128 5539145 Rcas_1669 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431779.1 2149112 R 383372 CDS YP_001431780.1 156741651 5539146 2150390..2151466 1 NC_009767.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2151466 5539146 Rcas_1670 Roseiflexus castenholzii DSM 13941 rod shape-determining protein MreB YP_001431780.1 2150390 D 383372 CDS YP_001431781.1 156741652 5539147 2151479..2152369 1 NC_009767.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 2152369 5539147 Rcas_1671 Roseiflexus castenholzii DSM 13941 rod shape-determining protein MreC YP_001431781.1 2151479 D 383372 CDS YP_001431782.1 156741653 5539148 2152333..2152872 1 NC_009767.1 KEGG: rrs:RoseRS_1281 hypothetical protein; hypothetical protein 2152872 5539148 Rcas_1672 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431782.1 2152333 D 383372 CDS YP_001431783.1 156741654 5539149 2152862..2155561 1 NC_009767.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rrs:RoseRS_1280 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 2155561 5539149 Rcas_1673 Roseiflexus castenholzii DSM 13941 peptidoglycan glycosyltransferase YP_001431783.1 2152862 D 383372 CDS YP_001431784.1 156741655 5539150 2155578..2155886 1 NC_009767.1 KEGG: rrs:RoseRS_1279 hypothetical protein; hypothetical protein 2155886 5539150 Rcas_1674 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431784.1 2155578 D 383372 CDS YP_001431785.1 156741656 5539151 complement(2156175..2156561) 1 NC_009767.1 PFAM: PilT protein domain protein; KEGG: plasmid stability protein; twitching motility protein PilT 2156561 5539151 Rcas_1675 Roseiflexus castenholzii DSM 13941 twitching motility protein PilT YP_001431785.1 2156175 R 383372 CDS YP_001431786.1 156741657 5539152 complement(2156558..2156794) 1 NC_009767.1 hypothetical protein 2156794 5539152 Rcas_1676 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431786.1 2156558 R 383372 CDS YP_001431787.1 156741658 5539153 2157004..2158362 1 NC_009767.1 KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 2158362 5539153 Rcas_1677 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431787.1 2157004 D 383372 CDS YP_001431788.1 156741659 5539154 complement(2158350..2160434) 1 NC_009767.1 KEGG: rrs:RoseRS_1278 hypothetical protein; hypothetical protein 2160434 5539154 Rcas_1678 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431788.1 2158350 R 383372 CDS YP_001431789.1 156741660 5539155 complement(2160735..2161118) 1 NC_009767.1 PFAM: protein of unknown function DUF192; KEGG: rrs:RoseRS_1277 protein of unknown function DUF192; hypothetical protein 2161118 5539155 Rcas_1679 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431789.1 2160735 R 383372 CDS YP_001431790.1 156741661 5539156 complement(2161115..2162050) 1 NC_009767.1 PFAM: type II secretion system protein; KEGG: rrs:RoseRS_1276 type II secretion system protein; type II secretion system protein 2162050 5539156 Rcas_1680 Roseiflexus castenholzii DSM 13941 type II secretion system protein YP_001431790.1 2161115 R 383372 CDS YP_001431791.1 156741662 5539157 complement(2162064..2163047) 1 NC_009767.1 PFAM: type II secretion system protein; KEGG: rrs:RoseRS_1275 type II secretion system protein; type II secretion system protein 2163047 5539157 Rcas_1681 Roseiflexus castenholzii DSM 13941 type II secretion system protein YP_001431791.1 2162064 R 383372 CDS YP_001431792.1 156741663 5539158 complement(2163192..2164589) 1 NC_009767.1 PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_1274 type II secretion system protein E; type II secretion system protein E 2164589 5539158 Rcas_1682 Roseiflexus castenholzii DSM 13941 type II secretion system protein E YP_001431792.1 2163192 R 383372 CDS YP_001431793.1 156741664 5539159 complement(2164616..2165908) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_1273 response regulator receiver protein; response regulator receiver protein 2165908 5539159 Rcas_1683 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001431793.1 2164616 R 383372 CDS YP_001431794.1 156741665 5539160 complement(2166163..2167173) 1 NC_009767.1 PFAM: SAF domain protein; KEGG: rrs:RoseRS_1272 SAF domain; SAF domain-containing protein 2167173 5539160 Rcas_1684 Roseiflexus castenholzii DSM 13941 SAF domain-containing protein YP_001431794.1 2166163 R 383372 CDS YP_001431795.1 156741666 5539161 complement(2167330..2169882) 1 NC_009767.1 PFAM: Kelch repeat-containing protein; KEGG: rrs:RoseRS_1271 kelch repeat-containing protein; kelch repeat-containing protein 2169882 5539161 Rcas_1685 Roseiflexus castenholzii DSM 13941 kelch repeat-containing protein YP_001431795.1 2167330 R 383372 CDS YP_001431796.1 156741667 5539162 complement(2170008..2172488) 1 NC_009767.1 SMART: von Willebrand factor type A; KEGG: rrs:RoseRS_1269 von Willebrand factor, type A; von Willebrand factor type A 2172488 5539162 Rcas_1686 Roseiflexus castenholzii DSM 13941 von Willebrand factor type A YP_001431796.1 2170008 R 383372 CDS YP_001431797.1 156741668 5539163 complement(2172628..2174382) 1 NC_009767.1 PFAM: PA14 domain protein; TadE family protein; SMART: PA14-related domain protein; KEGG: rrs:RoseRS_1268 PA14 domain protein; PA14 domain-containing protein 2174382 5539163 Rcas_1687 Roseiflexus castenholzii DSM 13941 PA14 domain-containing protein YP_001431797.1 2172628 R 383372 CDS YP_001431798.1 156741669 5539164 complement(2174414..2174941) 1 NC_009767.1 PFAM: TadE family protein; KEGG: rrs:RoseRS_1267 TadE family protein; TadE family protein 2174941 5539164 Rcas_1688 Roseiflexus castenholzii DSM 13941 TadE family protein YP_001431798.1 2174414 R 383372 CDS YP_001431799.1 156741670 5539165 complement(2175078..2178272) 1 NC_009767.1 KEGG: rrs:RoseRS_1266 hypothetical protein; hypothetical protein 2178272 5539165 Rcas_1689 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431799.1 2175078 R 383372 CDS YP_001431800.1 156741671 5539166 2178719..2181229 1 NC_009767.1 KEGG: rrs:RoseRS_1430 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein; DNA topoisomerase I 2181229 5539166 Rcas_1690 Roseiflexus castenholzii DSM 13941 DNA topoisomerase I YP_001431800.1 2178719 D 383372 CDS YP_001431801.1 156741672 5539167 2181774..2182442 1 NC_009767.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: rrs:RoseRS_1429 helix-hairpin-helix motif; helix-hairpin-helix repeat-containing competence protein ComEA 2182442 5539167 Rcas_1691 Roseiflexus castenholzii DSM 13941 helix-hairpin-helix repeat-containing competence protein ComEA YP_001431801.1 2181774 D 383372 CDS YP_001431802.1 156741673 5539168 2182439..2183878 1 NC_009767.1 KEGG: rrs:RoseRS_1428 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 2183878 5539168 Rcas_1692 Roseiflexus castenholzii DSM 13941 pyruvate kinase YP_001431802.1 2182439 D 383372 CDS YP_001431803.1 156741674 5539169 2184156..2184428 1 NC_009767.1 hypothetical protein 2184428 5539169 Rcas_1693 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431803.1 2184156 D 383372 CDS YP_001431804.1 156741675 5539170 2184430..2185833 1 NC_009767.1 KEGG: rrs:RoseRS_1426 hypothetical protein; hypothetical protein 2185833 5539170 Rcas_1694 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431804.1 2184430 D 383372 CDS YP_001431805.1 156741676 5539173 complement(2187594..2188829) 1 NC_009767.1 SMART: extracellular solute-binding protein family 3; KEGG: rrs:RoseRS_1420 extracellular solute-binding protein, family 3; extracellular solute-binding protein 2188829 5539173 Rcas_1695 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001431805.1 2187594 R 383372 CDS YP_001431806.1 156741677 5539174 2189309..2190679 1 NC_009767.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_1419 peptidase dimerisation domain protein; peptidase dimerisation domain-containing protein 2190679 5539174 Rcas_1696 Roseiflexus castenholzii DSM 13941 peptidase dimerisation domain-containing protein YP_001431806.1 2189309 D 383372 CDS YP_001431807.1 156741678 5539175 complement(2190868..2192532) 1 NC_009767.1 PFAM: Peptidase M9A collagenase domain protein; KEGG: rrs:RoseRS_1418 hypothetical protein; peptidase M9A collagenase domain-containing protein 2192532 5539175 Rcas_1697 Roseiflexus castenholzii DSM 13941 peptidase M9A collagenase domain-containing protein YP_001431807.1 2190868 R 383372 CDS YP_001431808.1 156741679 5539176 complement(2192637..2192978) 1 NC_009767.1 KEGG: rrs:RoseRS_1417 hypothetical protein; hypothetical protein 2192978 5539176 Rcas_1698 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431808.1 2192637 R 383372 CDS YP_001431809.1 156741680 5539177 2193230..2194072 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_1416 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 2194072 5539177 Rcas_1699 Roseiflexus castenholzii DSM 13941 dTDP-4-dehydrorhamnose reductase YP_001431809.1 2193230 D 383372 CDS YP_001431810.1 156741681 5539178 2194244..2195182 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1415 glycosyl transferase, family 2; glycosyl transferase family protein 2195182 5539178 Rcas_1700 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431810.1 2194244 D 383372 CDS YP_001431811.1 156741682 5539179 2195195..2196025 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1414 glycosyl transferase, family 2; glycosyl transferase family protein 2196025 5539179 Rcas_1701 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001431811.1 2195195 D 383372 CDS YP_001431812.1 156741683 5539180 2196038..2196592 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1412 protein of unknown function DUF820; hypothetical protein 2196592 5539180 Rcas_1702 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431812.1 2196038 D 383372 CDS YP_001431813.1 156741684 5539181 2196725..2197279 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1413 protein of unknown function DUF820; hypothetical protein 2197279 5539181 Rcas_1703 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431813.1 2196725 D 383372 CDS YP_001431814.1 156741685 5539182 complement(2198625..2201285) 1 NC_009767.1 KEGG: rrs:RoseRS_1411 hypothetical protein; hypothetical protein 2201285 5539182 Rcas_1704 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431814.1 2198625 R 383372 CDS YP_001431815.1 156741686 5539183 2201423..2202280 1 NC_009767.1 PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_1410 aldo/keto reductase; aldo/keto reductase 2202280 5539183 Rcas_1705 Roseiflexus castenholzii DSM 13941 aldo/keto reductase YP_001431815.1 2201423 D 383372 CDS YP_001431816.1 156741687 5539184 2202529..2202924 1 NC_009767.1 hypothetical protein 2202924 5539184 Rcas_1706 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431816.1 2202529 D 383372 CDS YP_001431817.1 156741688 5539185 2202946..2203395 1 NC_009767.1 PFAM: peptidase A24A prepilin type IV; KEGG: pca:Pcar_2139 type 4 prepilin-like proteins leader peptide processing enzyme; peptidase A24A prepilin type IV 2203395 5539185 Rcas_1707 Roseiflexus castenholzii DSM 13941 peptidase A24A prepilin type IV YP_001431817.1 2202946 D 383372 CDS YP_001431818.1 156741689 5539186 2203539..2204360 1 NC_009767.1 PFAM: transposase IS4 family protein; KEGG: rrs:RoseRS_1382 transposase, IS4 family protein; transposase IS4 family protein 2204360 5539186 Rcas_1708 Roseiflexus castenholzii DSM 13941 transposase IS4 family protein YP_001431818.1 2203539 D 383372 CDS YP_001431819.1 156741690 5539187 2204275..2206113 1 NC_009767.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: pth:PTH_1451 type IV secretory pathway, VirB11 components, and related ATPase; type II secretion system protein E 2206113 5539187 Rcas_1709 Roseiflexus castenholzii DSM 13941 type II secretion system protein E YP_001431819.1 2204275 D 383372 CDS YP_001431820.1 156741691 5539188 2206110..2208206 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: csa:Csal_1466 von Willebrand factor, type A; von Willebrand factor type A 2208206 5539188 Rcas_1710 Roseiflexus castenholzii DSM 13941 von Willebrand factor type A YP_001431820.1 2206110 D 383372 CDS YP_001431821.1 156741692 5539189 2208319..2209275 1 NC_009767.1 PFAM: type II secretion system protein; KEGG: drm:Dred_2117 type II secretion system protein; type II secretion system protein 2209275 5539189 Rcas_1711 Roseiflexus castenholzii DSM 13941 type II secretion system protein YP_001431821.1 2208319 D 383372 CDS YP_001431822.1 156741693 5539190 2210469..2211554 1 NC_009767.1 KEGG: rrs:RoseRS_1407 hypothetical protein; hypothetical protein 2211554 5539190 Rcas_1712 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431822.1 2210469 D 383372 CDS YP_001431823.1 156741694 5539191 complement(2211496..2212854) 1 NC_009767.1 KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 2212854 5539191 Rcas_1713 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431823.1 2211496 R 383372 CDS YP_001431824.1 156741695 5539192 2213039..2213359 1 NC_009767.1 hypothetical protein 2213359 5539192 Rcas_1714 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431824.1 2213039 D 383372 CDS YP_001431825.1 156741696 5539193 2213514..2213840 1 NC_009767.1 hypothetical protein 2213840 5539193 Rcas_1715 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431825.1 2213514 D 383372 CDS YP_001431826.1 156741697 5539194 2213941..2214447 1 NC_009767.1 KEGG: rrs:RoseRS_1407 hypothetical protein; hypothetical protein 2214447 5539194 Rcas_1716 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431826.1 2213941 D 383372 CDS YP_001431827.1 156741698 5539195 2214461..2214718 1 NC_009767.1 hypothetical protein 2214718 5539195 Rcas_1717 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431827.1 2214461 D 383372 CDS YP_001431828.1 156741699 5539196 2214792..2215151 1 NC_009767.1 KEGG: hne:HNE_2114 hypothetical protein; hypothetical protein 2215151 5539196 Rcas_1718 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431828.1 2214792 D 383372 CDS YP_001431829.1 156741700 5539197 2215273..2215650 1 NC_009767.1 hypothetical protein 2215650 5539197 Rcas_1719 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431829.1 2215273 D 383372 CDS YP_001431830.1 156741701 5539198 2215693..2216115 1 NC_009767.1 hypothetical protein 2216115 5539198 Rcas_1720 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431830.1 2215693 D 383372 CDS YP_001431831.1 156741702 5539199 complement(2216131..2217243) 1 NC_009767.1 PFAM: regulatory protein MarR; ABC-3 protein; KEGG: rrs:RoseRS_3067 ABC-3 protein; MarR family transcriptional regulator 2217243 5539199 Rcas_1721 Roseiflexus castenholzii DSM 13941 MarR family transcriptional regulator YP_001431831.1 2216131 R 383372 CDS YP_001431832.1 156741703 5539200 complement(2217301..2218182) 1 NC_009767.1 PFAM: ABC-3 protein; KEGG: rrs:RoseRS_3068 ABC-3 protein; ABC-3 protein 2218182 5539200 Rcas_1722 Roseiflexus castenholzii DSM 13941 ABC-3 protein YP_001431832.1 2217301 R 383372 CDS YP_001431833.1 156741704 5539201 complement(2218448..2219239) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3069 ABC transporter related; ABC transporter-like protein 2219239 5539201 Rcas_1723 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431833.1 2218448 R 383372 CDS YP_001431834.1 156741705 5539202 complement(2219309..2220238) 1 NC_009767.1 PFAM: periplasmic solute binding protein; KEGG: rrs:RoseRS_3070 periplasmic solute binding protein; periplasmic solute binding protein 2220238 5539202 Rcas_1724 Roseiflexus castenholzii DSM 13941 periplasmic solute binding protein YP_001431834.1 2219309 R 383372 CDS YP_001431835.1 156741706 5539203 2221108..2221434 1 NC_009767.1 KEGG: rrs:RoseRS_1005 hypothetical protein; hypothetical protein 2221434 5539203 Rcas_1725 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431835.1 2221108 D 383372 CDS YP_001431836.1 156741707 5539204 complement(2221449..2222324) 1 NC_009767.1 KEGG: rrs:RoseRS_1004 hypothetical protein; hypothetical protein 2222324 5539204 Rcas_1726 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431836.1 2221449 R 383372 CDS YP_001431837.1 156741708 5539205 2222609..2223475 1 NC_009767.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_1003 sortase family protein; sortase family protein 2223475 5539205 Rcas_1727 Roseiflexus castenholzii DSM 13941 sortase family protein YP_001431837.1 2222609 D 383372 CDS YP_001431838.1 156741709 5539206 2223509..2225428 1 NC_009767.1 TIGRFAM: conserved repeat domain; KEGG: rrs:RoseRS_1002 conserved repeat domain; hypothetical protein 2225428 5539206 Rcas_1728 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431838.1 2223509 D 383372 CDS YP_001431839.1 156741710 5539207 2225823..2226467 1 NC_009767.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2226467 5539207 Rcas_1729 Roseiflexus castenholzii DSM 13941 peptidyl-tRNA hydrolase YP_001431839.1 2225823 D 383372 CDS YP_001431840.1 156741711 5539208 complement(2226464..2226994) 1 NC_009767.1 TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: rrs:RoseRS_2141 small GTP-binding protein; small GTP-binding protein 2226994 5539208 Rcas_1730 Roseiflexus castenholzii DSM 13941 small GTP-binding protein YP_001431840.1 2226464 R 383372 CDS YP_001431841.1 156741712 5539209 complement(2227021..2227842) 1 NC_009767.1 KEGG: rrs:RoseRS_2140 hypothetical protein; hypothetical protein 2227842 5539209 Rcas_1731 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431841.1 2227021 R 383372 CDS YP_001431842.1 156741713 5539210 complement(2227873..2228814) 1 NC_009767.1 PFAM: protein of unknown function DUF1385; KEGG: rrs:RoseRS_2139 protein of unknown function DUF1385; hypothetical protein 2228814 5539210 Rcas_1732 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431842.1 2227873 R 383372 CDS YP_001431843.1 156741714 5539211 complement(2228968..2229411) 1 NC_009767.1 KEGG: rrs:RoseRS_2138 hypothetical protein; hypothetical protein 2229411 5539211 Rcas_1733 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431843.1 2228968 R 383372 CDS YP_001431844.1 156741715 5539212 complement(2229474..2229722) 1 NC_009767.1 KEGG: rrs:RoseRS_2137 hypothetical protein; hypothetical protein 2229722 5539212 Rcas_1734 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431844.1 2229474 R 383372 CDS YP_001431845.1 156741716 5539213 complement(2229739..2230890) 1 NC_009767.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2230890 mnmA 5539213 mnmA Roseiflexus castenholzii DSM 13941 tRNA-specific 2-thiouridylase MnmA YP_001431845.1 2229739 R 383372 CDS YP_001431846.1 156741717 5539214 complement(2231121..2232071) 1 NC_009767.1 TIGRFAM: mevalonate kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_2135 mevalonate kinase; mevalonate kinase 2232071 5539214 Rcas_1736 Roseiflexus castenholzii DSM 13941 mevalonate kinase YP_001431846.1 2231121 R 383372 CDS YP_001431847.1 156741718 5539215 complement(2232439..2235513) 1 NC_009767.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: rrs:RoseRS_2134 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 2235513 5539215 Rcas_1737 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431847.1 2232439 R 383372 CDS YP_001431848.1 156741719 5539216 complement(2235564..2236382) 1 NC_009767.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: rrs:RoseRS_2133 DNA binding domain, excisionase family; DNA binding domain-containing protein 2236382 5539216 Rcas_1738 Roseiflexus castenholzii DSM 13941 DNA binding domain-containing protein YP_001431848.1 2235564 R 383372 CDS YP_001431849.1 156741720 5539217 complement(2236456..2237994) 1 NC_009767.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2237994 guaA 5539217 guaA Roseiflexus castenholzii DSM 13941 GMP synthase YP_001431849.1 2236456 R 383372 CDS YP_001431850.1 156741721 5539218 2239997..2240476 1 NC_009767.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_2131 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase SixA 2240476 5539218 Rcas_1740 Roseiflexus castenholzii DSM 13941 phosphohistidine phosphatase SixA YP_001431850.1 2239997 D 383372 CDS YP_001431851.1 156741722 5539219 complement(2240701..2242587) 1 NC_009767.1 KEGG: rrs:RoseRS_2129 hypothetical protein; hypothetical protein 2242587 5539219 Rcas_1741 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431851.1 2240701 R 383372 CDS YP_001431852.1 156741723 5539220 complement(2244567..2245151) 1 NC_009767.1 KEGG: rrs:RoseRS_2127 uncharacterized metal-binding protein-like protein; hypothetical protein 2245151 5539220 Rcas_1742 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431852.1 2244567 R 383372 CDS YP_001431853.1 156741724 5539221 complement(2245385..2245777) 1 NC_009767.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_2126 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2245777 5539221 Rcas_1743 Roseiflexus castenholzii DSM 13941 glyoxalase/bleomycin resistance protein/dioxygenase YP_001431853.1 2245385 R 383372 CDS YP_001431854.1 156741725 5539222 2247172..2248611 1 NC_009767.1 PFAM: AAA-4 family protein; KEGG: rrs:RoseRS_2125 transcriptional regulator; transcriptional regulator 2248611 5539222 Rcas_1744 Roseiflexus castenholzii DSM 13941 transcriptional regulator YP_001431854.1 2247172 D 383372 CDS YP_001431855.1 156741726 5539223 complement(2248596..2249225) 1 NC_009767.1 PFAM: peptidase S16 lon domain protein; KEGG: rrs:RoseRS_2124 peptidase S16, lon domain protein; peptidase S16 lon domain-containing protein 2249225 5539223 Rcas_1745 Roseiflexus castenholzii DSM 13941 peptidase S16 lon domain-containing protein YP_001431855.1 2248596 R 383372 CDS YP_001431856.1 156741727 5539224 2249283..2249999 1 NC_009767.1 PFAM: lipolytic protein G-D-S-L family; KEGG: rrs:RoseRS_2123 lipolytic enzyme, G-D-S-L family; GDSL family lipase 2249999 5539224 Rcas_1746 Roseiflexus castenholzii DSM 13941 GDSL family lipase YP_001431856.1 2249283 D 383372 CDS YP_001431857.1 156741728 5539225 2250211..2250939 1 NC_009767.1 KEGG: rrs:RoseRS_2122 hypothetical protein; hypothetical protein 2250939 5539225 Rcas_1747 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431857.1 2250211 D 383372 CDS YP_001431858.1 156741729 5539226 2251573..2252871 1 NC_009767.1 SMART: AAA ATPase; KEGG: rrs:RoseRS_2121 AAA ATPase; ATPase AAA 2252871 5539226 Rcas_1748 Roseiflexus castenholzii DSM 13941 ATPase AAA YP_001431858.1 2251573 D 383372 CDS YP_001431859.1 156741730 5539227 2252887..2253480 1 NC_009767.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2253480 aat 5539227 aat Roseiflexus castenholzii DSM 13941 leucyl/phenylalanyl-tRNA--protein transferase YP_001431859.1 2252887 D 383372 CDS YP_001431860.1 156741731 5539228 complement(2253487..2254743) 1 NC_009767.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_2119 2-alkenal reductase; 2-alkenal reductase 2254743 5539228 Rcas_1750 Roseiflexus castenholzii DSM 13941 2-alkenal reductase YP_001431860.1 2253487 R 383372 CDS YP_001431861.1 156741732 5539229 complement(2254755..2255690) 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; domain of unknown function DUF1731; KEGG: rrs:RoseRS_2118 domain of unknown function DUF1731; hypothetical protein 2255690 5539229 Rcas_1751 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431861.1 2254755 R 383372 CDS YP_001431862.1 156741733 5539230 complement(2255894..2256907) 1 NC_009767.1 PFAM: Squalene/phytoene synthase; KEGG: rrs:RoseRS_2117 squalene/phytoene synthase; squalene/phytoene synthase 2256907 5539230 Rcas_1752 Roseiflexus castenholzii DSM 13941 squalene/phytoene synthase YP_001431862.1 2255894 R 383372 CDS YP_001431863.1 156741734 5539231 complement(2257181..2258140) 1 NC_009767.1 PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; KEGG: rrs:RoseRS_2116 regulatory protein, MerR; regulatory protein MerR 2258140 5539231 Rcas_1753 Roseiflexus castenholzii DSM 13941 regulatory protein MerR YP_001431863.1 2257181 R 383372 CDS YP_001431864.1 156741735 5539232 complement(2258340..2259227) 1 NC_009767.1 KEGG: rrs:RoseRS_2115 hypothetical protein; hypothetical protein 2259227 5539232 Rcas_1754 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431864.1 2258340 R 383372 CDS YP_001431865.1 156741736 5539233 complement(2259414..2260244) 1 NC_009767.1 PFAM: UbiE/COQ5 methyltransferase; protein of unknown function DUF343; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2114 methyltransferase type 11; type 11 methyltransferase 2260244 5539233 Rcas_1755 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001431865.1 2259414 R 383372 CDS YP_001431866.1 156741737 5539234 complement(2260237..2260644) 1 NC_009767.1 PFAM: protein of unknown function DUF309; KEGG: rrs:RoseRS_2113 protein of unknown function DUF309; hypothetical protein 2260644 5539234 Rcas_1756 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431866.1 2260237 R 383372 CDS YP_001431867.1 156741738 5539235 complement(2260644..2261048) 1 NC_009767.1 PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_2112 rhodanese domain protein; rhodanese domain-containing protein 2261048 5539235 Rcas_1757 Roseiflexus castenholzii DSM 13941 rhodanese domain-containing protein YP_001431867.1 2260644 R 383372 CDS YP_001431868.1 156741739 5539236 complement(2261089..2261541) 1 NC_009767.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rrs:RoseRS_2111 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein 2261541 5539236 Rcas_1758 Roseiflexus castenholzii DSM 13941 iron-sulfur cluster assembly accessory protein YP_001431868.1 2261089 R 383372 CDS YP_001431869.1 156741740 5539237 complement(2261687..2262757) 1 NC_009767.1 KEGG: rrs:RoseRS_2110 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 2262757 5539237 Rcas_1759 Roseiflexus castenholzii DSM 13941 molybdenum cofactor biosynthesis protein A YP_001431869.1 2261687 R 383372 CDS YP_001431870.1 156741741 5539238 complement(2262766..2263869) 1 NC_009767.1 PFAM: protein of unknown function DUF59; KEGG: rrs:RoseRS_2109 protein of unknown function DUF59; hypothetical protein 2263869 5539238 Rcas_1760 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431870.1 2262766 R 383372 CDS YP_001431871.1 156741742 5539239 complement(2264244..2265212) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2108 ABC transporter related; ABC transporter-like protein 2265212 5539239 Rcas_1761 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431871.1 2264244 R 383372 CDS YP_001431872.1 156741743 5539240 complement(2265345..2266319) 1 NC_009767.1 PFAM: UspA domain protein; KEGG: rrs:RoseRS_2107 UspA domain protein; UspA domain-containing protein 2266319 5539240 Rcas_1762 Roseiflexus castenholzii DSM 13941 UspA domain-containing protein YP_001431872.1 2265345 R 383372 CDS YP_001431873.1 156741744 5539241 complement(2266316..2267251) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2106 ABC transporter related; ABC transporter-like protein 2267251 5539241 Rcas_1763 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431873.1 2266316 R 383372 CDS YP_001431874.1 156741745 5539242 complement(2267248..2268018) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2105 alpha/beta hydrolase fold; alpha/beta hydrolase 2268018 5539242 Rcas_1764 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001431874.1 2267248 R 383372 CDS YP_001431875.1 156741746 5539243 complement(2268027..2269652) 1 NC_009767.1 PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_2104 secretion protein HlyD family protein; secretion protein HlyD family protein 2269652 5539243 Rcas_1765 Roseiflexus castenholzii DSM 13941 secretion protein HlyD family protein YP_001431875.1 2268027 R 383372 CDS YP_001431876.1 156741747 5539244 complement(2269672..2270784) 1 NC_009767.1 PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_2479 ABC-2 type transporter; ABC-2 type transporter 2270784 5539244 Rcas_1766 Roseiflexus castenholzii DSM 13941 ABC-2 type transporter YP_001431876.1 2269672 R 383372 CDS YP_001431877.1 156741748 5539245 complement(2270784..2271413) 1 NC_009767.1 PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_2103 transcriptional regulator, TetR family; TetR family transcriptional regulator 2271413 5539245 Rcas_1767 Roseiflexus castenholzii DSM 13941 TetR family transcriptional regulator YP_001431877.1 2270784 R 383372 CDS YP_001431878.1 156741749 5539246 2271894..2274272 1 NC_009767.1 PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_2102 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2274272 5539246 Rcas_1768 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase (quinone) YP_001431878.1 2271894 D 383372 CDS YP_001431879.1 156741750 5539247 2274284..2274700 1 NC_009767.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 2274700 5539247 Rcas_1769 Roseiflexus castenholzii DSM 13941 monovalent cation/H+ antiporter subunit B YP_001431879.1 2274284 D 383372 CDS YP_001431880.1 156741751 5539248 2274705..2275052 1 NC_009767.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2275052 5539248 Rcas_1770 Roseiflexus castenholzii DSM 13941 monovalent cation/H+ antiporter subunit C YP_001431880.1 2274705 D 383372 CDS YP_001431881.1 156741752 5539249 2275090..2276592 1 NC_009767.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_2099 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2276592 5539249 Rcas_1771 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase (quinone) YP_001431881.1 2275090 D 383372 CDS YP_001431882.1 156741753 5539250 2276602..2277072 1 NC_009767.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E 2277072 5539250 Rcas_1772 Roseiflexus castenholzii DSM 13941 monovalent cation/H+ antiporter subunit E YP_001431882.1 2276602 D 383372 CDS YP_001431883.1 156741754 5539251 2277072..2277335 1 NC_009767.1 PFAM: multiple resistance and pH regulation protein F; KEGG: rrs:RoseRS_2097 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 2277335 5539251 Rcas_1773 Roseiflexus castenholzii DSM 13941 multiple resistance and pH regulation protein F YP_001431883.1 2277072 D 383372 CDS YP_001431884.1 156741755 5539252 2277332..2277763 1 NC_009767.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: rrs:RoseRS_2096 monovalent cation/proton antiporter, MnhG/PhaG subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 2277763 5539252 Rcas_1774 Roseiflexus castenholzii DSM 13941 monovalent cation/proton antiporter subunit MnhG/PhaG YP_001431884.1 2277332 D 383372 CDS YP_001431885.1 156741756 5539253 complement(2278252..2279829) 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2094 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 2279829 5539253 Rcas_1775 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001431885.1 2278252 R 383372 CDS YP_001431886.1 156741757 5539254 complement(2279886..2280407) 1 NC_009767.1 PFAM: Acetone carboxylase gamma subunit; KEGG: rrs:RoseRS_2093 acetone carboxylase gamma subunit-like protein; acetone carboxylase subunit gamma 2280407 5539254 Rcas_1776 Roseiflexus castenholzii DSM 13941 acetone carboxylase subunit gamma YP_001431886.1 2279886 R 383372 CDS YP_001431887.1 156741758 5539255 complement(2280391..2282604) 1 NC_009767.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: rrs:RoseRS_2092 hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase 2282604 5539255 Rcas_1777 Roseiflexus castenholzii DSM 13941 hydantoinase B/oxoprolinase YP_001431887.1 2280391 R 383372 CDS YP_001431888.1 156741759 5539256 complement(2282648..2284795) 1 NC_009767.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rrs:RoseRS_2091 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 2284795 5539256 Rcas_1778 Roseiflexus castenholzii DSM 13941 5-oxoprolinase YP_001431888.1 2282648 R 383372 CDS YP_001431889.1 156741760 5539257 2284958..2285893 1 NC_009767.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rrs:RoseRS_2090 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 2285893 5539257 Rcas_1779 Roseiflexus castenholzii DSM 13941 AraC family transcriptional regulator YP_001431889.1 2284958 D 383372 CDS YP_001431890.1 156741761 5539258 complement(2286342..2287703) 1 NC_009767.1 PFAM: cation transporter; KEGG: rrs:RoseRS_2088 H(+)-transporting two-sector ATPase; H(+)-transporting two-sector ATPase 2287703 5539258 Rcas_1780 Roseiflexus castenholzii DSM 13941 H(+)-transporting two-sector ATPase YP_001431890.1 2286342 R 383372 CDS YP_001431891.1 156741762 5539259 complement(2287700..2288368) 1 NC_009767.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rrs:RoseRS_2087 TrkA-N domain protein; TrkA domain-containing protein 2288368 5539259 Rcas_1781 Roseiflexus castenholzii DSM 13941 TrkA domain-containing protein YP_001431891.1 2287700 R 383372 CDS YP_001431892.1 156741763 5539260 complement(2288455..2288685) 1 NC_009767.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: rrs:RoseRS_2086 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2288685 5539260 Rcas_1782 Roseiflexus castenholzii DSM 13941 AsnC family transcriptional regulator YP_001431892.1 2288455 R 383372 CDS YP_001431893.1 156741764 5539261 2289090..2289260 1 NC_009767.1 KEGG: rrs:RoseRS_2085 hypothetical protein; hypothetical protein 2289260 5539261 Rcas_1783 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431893.1 2289090 D 383372 CDS YP_001431894.1 156741765 5539262 2289415..2291187 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2084 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 2291187 5539262 Rcas_1784 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001431894.1 2289415 D 383372 CDS YP_001431895.1 156741766 5539263 2291294..2292505 1 NC_009767.1 KEGG: rrs:RoseRS_2083 hypothetical protein; hypothetical protein 2292505 5539263 Rcas_1785 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431895.1 2291294 D 383372 CDS YP_001431896.1 156741767 5539264 2292507..2293673 1 NC_009767.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: rrs:RoseRS_2082 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2293673 5539264 Rcas_1786 Roseiflexus castenholzii DSM 13941 iron-containing alcohol dehydrogenase YP_001431896.1 2292507 D 383372 CDS YP_001431897.1 156741768 5539265 2293779..2295347 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2074 GAF sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2295347 5539265 Rcas_1787 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001431897.1 2293779 D 383372 CDS YP_001431898.1 156741769 5539266 complement(2295554..2296165) 1 NC_009767.1 KEGG: rrs:RoseRS_2073 cation efflux protein; cation efflux protein 2296165 5539266 Rcas_1788 Roseiflexus castenholzii DSM 13941 cation efflux protein YP_001431898.1 2295554 R 383372 CDS YP_001431899.1 156741770 5539267 complement(2296162..2296416) 1 NC_009767.1 KEGG: rrs:RoseRS_2072 hypothetical protein; hypothetical protein 2296416 5539267 Rcas_1789 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431899.1 2296162 R 383372 CDS YP_001431900.1 156741771 5539268 complement(2296728..2296940) 1 NC_009767.1 PFAM: protein of unknown function DUF1458; KEGG: rrs:RoseRS_2071 protein of unknown function DUF1458; hypothetical protein 2296940 5539268 Rcas_1790 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431900.1 2296728 R 383372 CDS YP_001431901.1 156741772 5539269 complement(2297037..2297528) 1 NC_009767.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rrs:RoseRS_2070 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 2297528 5539269 Rcas_1791 Roseiflexus castenholzii DSM 13941 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001431901.1 2297037 R 383372 CDS YP_001431902.1 156741773 5539270 2298941..2300215 1 NC_009767.1 KEGG: rrs:RoseRS_2069 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 2300215 5539270 Rcas_1792 Roseiflexus castenholzii DSM 13941 tyrosyl-tRNA synthetase YP_001431902.1 2298941 D 383372 CDS YP_001431903.1 156741774 5539271 complement(2300238..2303753) 1 NC_009767.1 PFAM: cyclic nucleotide-binding; peptidase M50; KEGG: rrs:RoseRS_2624 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 2303753 5539271 Rcas_1793 Roseiflexus castenholzii DSM 13941 cyclic nucleotide-binding protein YP_001431903.1 2300238 R 383372 CDS YP_001431904.1 156741775 5539272 2304555..2305316 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2623 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2305316 5539272 Rcas_1794 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001431904.1 2304555 D 383372 CDS YP_001431905.1 156741776 5539273 2305322..2308267 1 NC_009767.1 KEGG: rrs:RoseRS_2622 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase II 2308267 5539273 Rcas_1795 Roseiflexus castenholzii DSM 13941 phosphoribosylformylglycinamidine synthase II YP_001431905.1 2305322 D 383372 CDS YP_001431906.1 156741777 5539274 2308290..2309108 1 NC_009767.1 KEGG: rrs:RoseRS_2621 hypothetical protein; hypothetical protein 2309108 5539274 Rcas_1796 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431906.1 2308290 D 383372 CDS YP_001431907.1 156741778 5539275 2309108..2309830 1 NC_009767.1 KEGG: rrs:RoseRS_2620 hypothetical protein; hypothetical protein 2309830 5539275 Rcas_1797 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431907.1 2309108 D 383372 CDS YP_001431908.1 156741779 5539276 complement(2309901..2310554) 1 NC_009767.1 PFAM: O-methyltransferase family 3; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2619 O-methyltransferase, family 3; O-methyltransferase family protein 2310554 5539276 Rcas_1798 Roseiflexus castenholzii DSM 13941 O-methyltransferase family protein YP_001431908.1 2309901 R 383372 CDS YP_001431909.1 156741780 5539277 2310805..2311524 1 NC_009767.1 PFAM: esterase; KEGG: rrs:RoseRS_2618 esterase; esterase 2311524 5539277 Rcas_1799 Roseiflexus castenholzii DSM 13941 esterase YP_001431909.1 2310805 D 383372 CDS YP_001431910.1 156741781 5539278 2311554..2312513 1 NC_009767.1 KEGG: rrs:RoseRS_2617 hypothetical protein; hypothetical protein 2312513 5539278 Rcas_1800 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431910.1 2311554 D 383372 CDS YP_001431911.1 156741782 5539279 2312737..2314134 1 NC_009767.1 PFAM: protein of unknown function DUF407; KEGG: rrs:RoseRS_2616 protein of unknown function DUF407; hypothetical protein 2314134 5539279 Rcas_1801 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431911.1 2312737 D 383372 CDS YP_001431912.1 156741783 5539280 2314131..2315270 1 NC_009767.1 ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase 2315270 5539280 Rcas_1802 Roseiflexus castenholzii DSM 13941 carboxylate-amine ligase YP_001431912.1 2314131 D 383372 CDS YP_001431913.1 156741784 5539281 complement(2315369..2316361) 1 NC_009767.1 KEGG: rrs:RoseRS_2614 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-ACP synthase 2316361 5539281 Rcas_1803 Roseiflexus castenholzii DSM 13941 3-oxoacyl-ACP synthase YP_001431913.1 2315369 R 383372 CDS YP_001431914.1 156741785 5539282 complement(2316443..2316640) 1 NC_009767.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: rrs:RoseRS_2613 ribosomal protein L32; 50S ribosomal protein L32 2316640 5539282 Rcas_1804 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L32 YP_001431914.1 2316443 R 383372 CDS YP_001431915.1 156741786 5539283 complement(2316660..2317208) 1 NC_009767.1 PFAM: protein of unknown function DUF177; KEGG: rrs:RoseRS_2612 protein of unknown function DUF177; hypothetical protein 2317208 5539283 Rcas_1805 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431915.1 2316660 R 383372 CDS YP_001431916.1 156741787 5539284 complement(2317274..2317651) 1 NC_009767.1 KEGG: rrs:RoseRS_2611 hypothetical protein; hypothetical protein 2317651 5539284 Rcas_1806 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431916.1 2317274 R 383372 CDS YP_001431917.1 156741788 5539285 complement(2317715..2318197) 1 NC_009767.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2318197 coaD 5539285 coaD Roseiflexus castenholzii DSM 13941 phosphopantetheine adenylyltransferase YP_001431917.1 2317715 R 383372 CDS YP_001431918.1 156741789 5539286 complement(2318294..2318869) 1 NC_009767.1 TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_2609 methyltransferase; methyltransferase 2318869 5539286 Rcas_1808 Roseiflexus castenholzii DSM 13941 methyltransferase YP_001431918.1 2318294 R 383372 CDS YP_001431919.1 156741790 5539288 complement(2319454..2320443) 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tel:tlr1878 DNA-methyltransferase; DNA methylase N-4/N-6 domain-containing protein 2320443 5539288 Rcas_1810 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001431919.1 2319454 R 383372 CDS YP_001431920.1 156741791 5539289 complement(2320440..2321804) 1 NC_009767.1 PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_2608 aminotransferase class-III; class III aminotransferase 2321804 5539289 Rcas_1811 Roseiflexus castenholzii DSM 13941 class III aminotransferase YP_001431920.1 2320440 R 383372 CDS YP_001431921.1 156741792 5539290 complement(2321804..2322538) 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2607 metallophosphoesterase; metallophosphoesterase 2322538 5539290 Rcas_1812 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001431921.1 2321804 R 383372 CDS YP_001431922.1 156741793 5539291 2322755..2324392 1 NC_009767.1 KEGG: rrs:RoseRS_2606 hypothetical protein; hypothetical protein 2324392 5539291 Rcas_1813 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431922.1 2322755 D 383372 CDS YP_001431923.1 156741794 5539292 complement(2324394..2324729) 1 NC_009767.1 KEGG: rrs:RoseRS_2605 hypothetical protein; hypothetical protein 2324729 5539292 Rcas_1814 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431923.1 2324394 R 383372 CDS YP_001431924.1 156741795 5539293 complement(2324726..2324959) 1 NC_009767.1 KEGG: rrs:RoseRS_2604 hypothetical protein; hypothetical protein 2324959 5539293 Rcas_1815 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431924.1 2324726 R 383372 CDS YP_001431925.1 156741796 5539294 complement(2324977..2325489) 1 NC_009767.1 PFAM: protein of unknown function DUF83; KEGG: rrs:RoseRS_2603 hypothetical protein; hypothetical protein 2325489 5539294 Rcas_1816 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431925.1 2324977 R 383372 CDS YP_001431926.1 156741797 5539295 complement(2325493..2325741) 1 NC_009767.1 KEGG: rrs:RoseRS_2602 hypothetical protein; hypothetical protein 2325741 5539295 Rcas_1817 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431926.1 2325493 R 383372 CDS YP_001431927.1 156741798 5539296 complement(2325760..2326875) 1 NC_009767.1 PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_2601 peptidase M50; peptidase M50 2326875 5539296 Rcas_1818 Roseiflexus castenholzii DSM 13941 peptidase M50 YP_001431927.1 2325760 R 383372 CDS YP_001431928.1 156741799 5539297 2328255..2328869 1 NC_009767.1 PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_2738 beta-lactamase domain protein; beta-lactamase domain-containing protein 2328869 5539297 Rcas_1819 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001431928.1 2328255 D 383372 CDS YP_001431929.1 156741800 5539298 2328879..2330114 1 NC_009767.1 KEGG: rrs:RoseRS_2739 membrane protein-like protein; hypothetical protein 2330114 5539298 Rcas_1820 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431929.1 2328879 D 383372 CDS YP_001431930.1 156741801 5539299 2330111..2330509 1 NC_009767.1 KEGG: rrs:RoseRS_2740 protein of unknown function DUF820; hypothetical protein 2330509 5539299 Rcas_1821 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431930.1 2330111 D 383372 CDS YP_001431931.1 156741802 5539300 2330961..2331845 1 NC_009767.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rrs:RoseRS_2741 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2331845 5539300 Rcas_1822 Roseiflexus castenholzii DSM 13941 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001431931.1 2330961 D 383372 CDS YP_001431932.1 156741803 5539301 2331856..2332902 1 NC_009767.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: rrs:RoseRS_2742 agmatine deiminase; agmatine deiminase 2332902 5539301 Rcas_1823 Roseiflexus castenholzii DSM 13941 agmatine deiminase YP_001431932.1 2331856 D 383372 CDS YP_001431933.1 156741804 5539302 complement(2332919..2333839) 1 NC_009767.1 PFAM: protein of unknown function DUF92 transmembrane; KEGG: rrs:RoseRS_2743 protein of unknown function DUF92, transmembrane; hypothetical protein 2333839 5539302 Rcas_1824 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431933.1 2332919 R 383372 CDS YP_001431934.1 156741805 5539303 complement(2334192..2334704) 1 NC_009767.1 PFAM: cyclase/dehydrase; KEGG: rrs:RoseRS_2744 cyclase/dehydrase; cyclase/dehydrase 2334704 5539303 Rcas_1825 Roseiflexus castenholzii DSM 13941 cyclase/dehydrase YP_001431934.1 2334192 R 383372 CDS YP_001431935.1 156741806 5539304 2335167..2335352 1 NC_009767.1 KEGG: rrs:RoseRS_2745 hypothetical protein; hypothetical protein 2335352 5539304 Rcas_1826 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431935.1 2335167 D 383372 CDS YP_001431936.1 156741807 5539305 2335433..2336305 1 NC_009767.1 KEGG: rrs:RoseRS_2746 hypothetical protein; hypothetical protein 2336305 5539305 Rcas_1827 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431936.1 2335433 D 383372 CDS YP_001431937.1 156741808 5539306 complement(2336606..2338195) 1 NC_009767.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rrs:RoseRS_2748 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2338195 5539306 Rcas_1828 Roseiflexus castenholzii DSM 13941 polysaccharide biosynthesis protein YP_001431937.1 2336606 R 383372 CDS YP_001431938.1 156741809 5539307 2338247..2339041 1 NC_009767.1 PFAM: protein of unknown function DUF990; KEGG: sma:SAV5180 hypothetical protein; hypothetical protein 2339041 5539307 Rcas_1829 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431938.1 2338247 D 383372 CDS YP_001431939.1 156741810 5539308 2339041..2339838 1 NC_009767.1 PFAM: protein of unknown function DUF990; KEGG: reu:Reut_A1067 protein of unknown function DUF990; hypothetical protein 2339838 5539308 Rcas_1830 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431939.1 2339041 D 383372 CDS YP_001431940.1 156741811 5539309 complement(2339845..2340258) 1 NC_009767.1 KEGG: rrs:RoseRS_2747 hypothetical protein; hypothetical protein 2340258 5539309 Rcas_1831 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431940.1 2339845 R 383372 CDS YP_001431941.1 156741812 5539310 2340343..2341350 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2664 ABC transporter ATP-binding protein; ABC transporter-like protein 2341350 5539310 Rcas_1832 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001431941.1 2340343 D 383372 CDS YP_001431942.1 156741813 5539311 complement(2341366..2341923) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1412 protein of unknown function DUF820; hypothetical protein 2341923 5539311 Rcas_1833 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431942.1 2341366 R 383372 CDS YP_001431943.1 156741814 5539312 2342051..2343832 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2749 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2343832 5539312 Rcas_1834 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431943.1 2342051 D 383372 CDS YP_001431944.1 156741815 5539313 2343853..2344998 1 NC_009767.1 PFAM: amidohydrolase 2; KEGG: rrs:RoseRS_2750 amidohydrolase 2; amidohydrolase 2344998 5539313 Rcas_1835 Roseiflexus castenholzii DSM 13941 amidohydrolase YP_001431944.1 2343853 D 383372 CDS YP_001431945.1 156741816 5539314 2344995..2346233 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2751 major facilitator superfamily MFS_1; major facilitator transporter 2346233 5539314 Rcas_1836 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001431945.1 2344995 D 383372 CDS YP_001431946.1 156741817 5539315 2346377..2347156 1 NC_009767.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_2752 phosphoglycolate phosphatase; phosphoglycolate phosphatase 2347156 5539315 Rcas_1837 Roseiflexus castenholzii DSM 13941 phosphoglycolate phosphatase YP_001431946.1 2346377 D 383372 CDS YP_001431947.1 156741818 5539316 2347417..2348541 1 NC_009767.1 KEGG: rrs:RoseRS_2075 hypothetical protein; hypothetical protein 2348541 5539316 Rcas_1838 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431947.1 2347417 D 383372 CDS YP_001431948.1 156741819 5539317 complement(2348592..2349680) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2548 glycosyl transferase, group 1; group 1 glycosyl transferase 2349680 5539317 Rcas_1839 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001431948.1 2348592 R 383372 CDS YP_001431949.1 156741820 5539318 complement(2349683..2351029) 1 NC_009767.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_2549 peptidase M20; peptidase M20 2351029 5539318 Rcas_1840 Roseiflexus castenholzii DSM 13941 peptidase M20 YP_001431949.1 2349683 R 383372 CDS YP_001431950.1 156741821 5539319 2351159..2352307 1 NC_009767.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_2550 PHP C-terminal domain protein; phosphotransferase domain-containing protein 2352307 5539319 Rcas_1841 Roseiflexus castenholzii DSM 13941 phosphotransferase domain-containing protein YP_001431950.1 2351159 D 383372 CDS YP_001431951.1 156741822 5539320 complement(2353328..2354359) 1 NC_009767.1 KEGG: rrs:RoseRS_2551 hypothetical protein; hypothetical protein 2354359 5539320 Rcas_1842 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431951.1 2353328 R 383372 CDS YP_001431952.1 156741823 5539321 complement(2354340..2355089) 1 NC_009767.1 PFAM: SAICAR synthetase; KEGG: rrs:RoseRS_2552 phosphoribosylaminoimidazolesuccinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 2355089 5539321 Rcas_1843 Roseiflexus castenholzii DSM 13941 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001431952.1 2354340 R 383372 CDS YP_001431953.1 156741824 5539322 complement(2355945..2356970) 1 NC_009767.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2356970 5539322 Rcas_1844 Roseiflexus castenholzii DSM 13941 phosphoribosylaminoimidazole synthetase YP_001431953.1 2355945 R 383372 CDS YP_001431954.1 156741825 5539323 2357080..2357724 1 NC_009767.1 KEGG: rrs:RoseRS_2555 hypothetical protein; hypothetical protein 2357724 5539323 Rcas_1845 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431954.1 2357080 D 383372 CDS YP_001431955.1 156741826 5539324 2357721..2358131 1 NC_009767.1 hypothetical protein 2358131 5539324 Rcas_1846 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431955.1 2357721 D 383372 CDS YP_001431956.1 156741827 5539325 2358309..2360648 1 NC_009767.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: rrs:RoseRS_2556 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 2360648 5539325 Rcas_1847 Roseiflexus castenholzii DSM 13941 (NiFe) hydrogenase maturation protein HypF YP_001431956.1 2358309 D 383372 CDS YP_001431957.1 156741828 5539326 2360928..2362031 1 NC_009767.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2362031 5539326 Rcas_1848 Roseiflexus castenholzii DSM 13941 dihydroorotase YP_001431957.1 2360928 D 383372 CDS YP_001431958.1 156741829 5539327 2362197..2363273 1 NC_009767.1 PFAM: regulatory protein LacI; helix-turn-helix domain protein; periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_2559 alanine racemase; LacI family transcriptional regulator 2363273 5539327 Rcas_1849 Roseiflexus castenholzii DSM 13941 LacI family transcriptional regulator YP_001431958.1 2362197 D 383372 CDS YP_001431959.1 156741830 5539328 2363285..2363536 1 NC_009767.1 KEGG: rrs:RoseRS_2560 hypothetical protein; hypothetical protein 2363536 5539328 Rcas_1850 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431959.1 2363285 D 383372 CDS YP_001431960.1 156741831 5539329 complement(2363517..2364638) 1 NC_009767.1 KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein; glucose-6-phosphate dehydrogenase 2364638 5539329 Rcas_1851 Roseiflexus castenholzii DSM 13941 glucose-6-phosphate dehydrogenase YP_001431960.1 2363517 R 383372 CDS YP_001431961.1 156741832 5539330 complement(2364635..2366191) 1 NC_009767.1 KEGG: rrs:RoseRS_2562 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2366191 5539330 Rcas_1852 Roseiflexus castenholzii DSM 13941 glucose-6-phosphate 1-dehydrogenase YP_001431961.1 2364635 R 383372 CDS YP_001431962.1 156741833 5539331 complement(2366219..2368813) 1 NC_009767.1 KEGG: rrs:RoseRS_2563 hypothetical protein; hypothetical protein 2368813 5539331 Rcas_1853 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431962.1 2366219 R 383372 CDS YP_001431963.1 156741834 5539332 2368904..2369188 1 NC_009767.1 PFAM: protein of unknown function DUF427; KEGG: rrs:RoseRS_2564 protein of unknown function DUF427; hypothetical protein 2369188 5539332 Rcas_1854 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431963.1 2368904 D 383372 CDS YP_001431964.1 156741835 5539333 complement(2369239..2369943) 1 NC_009767.1 PFAM: protein of unknown function DUF162; KEGG: rrs:RoseRS_2565 protein of unknown function DUF162; hypothetical protein 2369943 5539333 Rcas_1855 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431964.1 2369239 R 383372 CDS YP_001431965.1 156741836 5539334 2370402..2371499 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2566 anti-sigma-factor antagonist; anti-sigma-factor antagonist 2371499 5539334 Rcas_1856 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001431965.1 2370402 D 383372 CDS YP_001431966.1 156741837 5539335 2371496..2372104 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4336 protein of unknown function DUF820; hypothetical protein 2372104 5539335 Rcas_1857 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431966.1 2371496 D 383372 CDS YP_001431967.1 156741838 5539336 complement(2372358..2374970) 1 NC_009767.1 PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_2585 protein of unknown function DUF214; hypothetical protein 2374970 5539336 Rcas_1858 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431967.1 2372358 R 383372 CDS YP_001431968.1 156741839 5539337 complement(2374967..2376616) 1 NC_009767.1 PFAM: Amidohydrolase 3; KEGG: rrs:RoseRS_2586 amidohydrolase 3; amidohydrolase 2376616 5539337 Rcas_1859 Roseiflexus castenholzii DSM 13941 amidohydrolase YP_001431968.1 2374967 R 383372 CDS YP_001431969.1 156741840 5539338 2376868..2378097 1 NC_009767.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ppd:Ppro_1454 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 2378097 5539338 Rcas_1860 Roseiflexus castenholzii DSM 13941 molybdenum cofactor synthesis domain-containing protein YP_001431969.1 2376868 D 383372 CDS YP_001431970.1 156741841 5539339 2378160..2380103 1 NC_009767.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sat:SYN_00267 molybdopterin biosynthesis protein; molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein 2380103 5539339 Rcas_1861 Roseiflexus castenholzii DSM 13941 molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein YP_001431970.1 2378160 D 383372 CDS YP_001431971.1 156741842 5539340 complement(2380185..2380463) 1 NC_009767.1 TIGRFAM: MoaD family protein; PFAM: thiamineS protein; KEGG: pas:Pars_0825 MoaD family protein; MoaD family protein 2380463 5539340 Rcas_1862 Roseiflexus castenholzii DSM 13941 MoaD family protein YP_001431971.1 2380185 R 383372 CDS YP_001431972.1 156741843 5539341 complement(2380529..2382358) 1 NC_009767.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: tth:TTC1834 tungsten-containing aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase 2382358 5539341 Rcas_1863 Roseiflexus castenholzii DSM 13941 aldehyde ferredoxin oxidoreductase YP_001431972.1 2380529 R 383372 CDS YP_001431973.1 156741844 5539342 2382778..2384214 1 NC_009767.1 PFAM: amine oxidase; KEGG: rrs:RoseRS_2594 amine oxidase; amine oxidase 2384214 5539342 Rcas_1864 Roseiflexus castenholzii DSM 13941 amine oxidase YP_001431973.1 2382778 D 383372 CDS YP_001431974.1 156741845 5539343 2384227..2384844 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2595 protein of unknown function DUF820; hypothetical protein 2384844 5539343 Rcas_1865 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431974.1 2384227 D 383372 CDS YP_001431975.1 156741846 5539344 2384854..2386416 1 NC_009767.1 PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_2596 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 2386416 5539344 Rcas_1866 Roseiflexus castenholzii DSM 13941 carbohydrate kinase FGGY YP_001431975.1 2384854 D 383372 CDS YP_001431976.1 156741847 5539345 2386418..2387914 1 NC_009767.1 PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: rrs:RoseRS_2597 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 2387914 5539345 Rcas_1867 Roseiflexus castenholzii DSM 13941 pyridoxal-dependent decarboxylase YP_001431976.1 2386418 D 383372 CDS YP_001431977.1 156741848 5539346 complement(2388335..2388553) 1 NC_009767.1 KEGG: rrs:RoseRS_2598 hypothetical protein; hypothetical protein 2388553 5539346 Rcas_1868 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431977.1 2388335 R 383372 CDS YP_001431978.1 156741849 5539347 complement(2388858..2390783) 1 NC_009767.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_2600 protein kinase; serine/threonine protein kinase 2390783 5539347 Rcas_1869 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001431978.1 2388858 R 383372 CDS YP_001431979.1 156741850 5539348 complement(2391084..2399678) 1 NC_009767.1 PFAM: carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: rrs:RoseRS_2737 glycosyltransferase 36; glycosyltransferase 2399678 5539348 Rcas_1870 Roseiflexus castenholzii DSM 13941 glycosyltransferase YP_001431979.1 2391084 R 383372 CDS YP_001431980.1 156741851 5539349 complement(2399925..2400329) 1 NC_009767.1 KEGG: rrs:RoseRS_2736 hypothetical protein; hypothetical protein 2400329 5539349 Rcas_1871 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431980.1 2399925 R 383372 CDS YP_001431981.1 156741852 5539350 complement(2400601..2401986) 1 NC_009767.1 KEGG: rrs:RoseRS_2537 hypothetical protein; hypothetical protein 2401986 5539350 Rcas_1872 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431981.1 2400601 R 383372 CDS YP_001431982.1 156741853 5539351 2402268..2402678 1 NC_009767.1 hypothetical protein 2402678 5539351 Rcas_1873 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431982.1 2402268 D 383372 CDS YP_001431983.1 156741854 5539352 complement(2402803..2405490) 1 NC_009767.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: rrs:RoseRS_2735 alpha-L-rhamnosidase; alpha-L-rhamnosidase 2405490 5539352 Rcas_1874 Roseiflexus castenholzii DSM 13941 alpha-L-rhamnosidase YP_001431983.1 2402803 R 383372 CDS YP_001431984.1 156741855 5539353 complement(2405487..2407721) 1 NC_009767.1 KEGG: rrs:RoseRS_2734 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 2407721 5539353 Rcas_1875 Roseiflexus castenholzii DSM 13941 6-phosphofructokinase YP_001431984.1 2405487 R 383372 CDS YP_001431985.1 156741856 5539354 2409812..2410309 1 NC_009767.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: rrs:RoseRS_2733 hydrogenase maturation protease; hydrogenase maturation protease 2410309 5539354 Rcas_1876 Roseiflexus castenholzii DSM 13941 hydrogenase maturation protease YP_001431985.1 2409812 D 383372 CDS YP_001431986.1 156741857 5539355 complement(2410306..2411187) 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2899 metallophosphoesterase; metallophosphoesterase 2411187 5539355 Rcas_1877 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001431986.1 2410306 R 383372 CDS YP_001431987.1 156741858 5539357 2412968..2414326 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_2896 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2414326 5539357 Rcas_1879 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001431987.1 2412968 D 383372 CDS YP_001431988.1 156741859 5539358 2414409..2415359 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2895 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2415359 5539358 Rcas_1880 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001431988.1 2414409 D 383372 CDS YP_001431989.1 156741860 5539359 2415371..2416264 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2894 binding-protein-dependent transport systems inner membrane component; monosaccharide-transporting ATPase 2416264 5539359 Rcas_1881 Roseiflexus castenholzii DSM 13941 monosaccharide-transporting ATPase YP_001431989.1 2415371 D 383372 CDS YP_001431990.1 156741861 5539360 2416272..2417993 1 NC_009767.1 PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: rrs:RoseRS_2893 FG-GAP repeat protein; ASPIC/UnbV domain-containing protein 2417993 5539360 Rcas_1882 Roseiflexus castenholzii DSM 13941 ASPIC/UnbV domain-containing protein YP_001431990.1 2416272 D 383372 CDS YP_001431991.1 156741862 5539361 2418016..2418780 1 NC_009767.1 KEGG: rrs:RoseRS_2892 hypothetical protein; hypothetical protein 2418780 5539361 Rcas_1883 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431991.1 2418016 D 383372 CDS YP_001431992.1 156741863 5539362 2418834..2420240 1 NC_009767.1 PFAM: glycoside hydrolase family 4; KEGG: rrs:RoseRS_2891 glycoside hydrolase, family 4; glycoside hydrolase family protein 2420240 5539362 Rcas_1884 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001431992.1 2418834 D 383372 CDS YP_001431993.1 156741864 5539363 complement(2421536..2422603) 1 NC_009767.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 2422603 5539363 Rcas_1885 Roseiflexus castenholzii DSM 13941 galactose-1-phosphate uridylyltransferase YP_001431993.1 2421536 R 383372 CDS YP_001431994.1 156741865 5539364 complement(2423959..2425134) 1 NC_009767.1 KEGG: rrs:RoseRS_2969 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 2425134 5539364 Rcas_1886 Roseiflexus castenholzii DSM 13941 acetyl-CoA acetyltransferase YP_001431994.1 2423959 R 383372 CDS YP_001431995.1 156741866 5539365 complement(2425189..2427612) 1 NC_009767.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rrs:RoseRS_2970 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 2427612 5539365 Rcas_1887 Roseiflexus castenholzii DSM 13941 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001431995.1 2425189 R 383372 CDS YP_001431996.1 156741867 5539366 complement(2427697..2428953) 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2971 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 2428953 5539366 Rcas_1888 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001431996.1 2427697 R 383372 CDS YP_001431997.1 156741868 5539367 complement(2428964..2430058) 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2972 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 2430058 5539367 Rcas_1889 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001431997.1 2428964 R 383372 CDS YP_001431998.1 156741869 5539368 complement(2430077..2430628) 1 NC_009767.1 PFAM: Sterol-binding domain protein; KEGG: rrs:RoseRS_2973 hypothetical protein; sterol-binding domain-containing protein 2430628 5539368 Rcas_1890 Roseiflexus castenholzii DSM 13941 sterol-binding domain-containing protein YP_001431998.1 2430077 R 383372 CDS YP_001431999.1 156741870 5539369 complement(2431622..2432257) 1 NC_009767.1 KEGG: rrs:RoseRS_2974 hypothetical protein; hypothetical protein 2432257 5539369 Rcas_1891 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001431999.1 2431622 R 383372 CDS YP_001432000.1 156741871 5539370 2432692..2433960 1 NC_009767.1 PFAM: Extracellular ligand-binding receptor; KEGG: rrs:RoseRS_2975 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2433960 5539370 Rcas_1892 Roseiflexus castenholzii DSM 13941 extracellular ligand-binding receptor YP_001432000.1 2432692 D 383372 CDS YP_001432001.1 156741872 5539371 2434064..2435245 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2976 inner-membrane translocator; inner-membrane translocator 2435245 5539371 Rcas_1893 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001432001.1 2434064 D 383372 CDS YP_001432002.1 156741873 5539372 2435250..2436614 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2977 inner-membrane translocator; inner-membrane translocator 2436614 5539372 Rcas_1894 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001432002.1 2435250 D 383372 CDS YP_001432003.1 156741874 5539373 2436626..2437420 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2978 ABC transporter related; ABC transporter-like protein 2437420 5539373 Rcas_1895 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432003.1 2436626 D 383372 CDS YP_001432004.1 156741875 5539374 2437646..2438359 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2979 ABC transporter related; ABC transporter-like protein 2438359 5539374 Rcas_1896 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432004.1 2437646 D 383372 CDS YP_001432005.1 156741876 5539375 2438563..2439126 1 NC_009767.1 KEGG: rrs:RoseRS_2980 hypothetical protein; hypothetical protein 2439126 5539375 Rcas_1897 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432005.1 2438563 D 383372 CDS YP_001432006.1 156741877 5539376 complement(2439142..2441691) 1 NC_009767.1 TIGRFAM: alanine racemase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; alanine racemase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_2981 alanine racemase; alanine racemase 2441691 5539376 Rcas_1898 Roseiflexus castenholzii DSM 13941 alanine racemase YP_001432006.1 2439142 R 383372 CDS YP_001432007.1 156741878 5539377 2441874..2442143 1 NC_009767.1 KEGG: rrs:RoseRS_2802 hypothetical protein; hypothetical protein 2442143 5539377 Rcas_1899 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432007.1 2441874 D 383372 CDS YP_001432008.1 156741879 5539378 2443794..2444900 1 NC_009767.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rrs:RoseRS_2982 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 2444900 5539378 Rcas_1900 Roseiflexus castenholzii DSM 13941 mandelate racemase/muconate lactonizing protein YP_001432008.1 2443794 D 383372 CDS YP_001432009.1 156741880 5539379 2445485..2446909 1 NC_009767.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rrs:RoseRS_2983 glutamine synthetase, type I; glutamine synthetase, type I 2446909 5539379 Rcas_1901 Roseiflexus castenholzii DSM 13941 glutamine synthetase, type I YP_001432009.1 2445485 D 383372 CDS YP_001432010.1 156741881 5539380 2447243..2448679 1 NC_009767.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rrs:RoseRS_2984 ammonium transporter; ammonium transporter 2448679 5539380 Rcas_1902 Roseiflexus castenholzii DSM 13941 ammonium transporter YP_001432010.1 2447243 D 383372 CDS YP_001432011.1 156741882 5539381 2449122..2453762 1 NC_009767.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rrs:RoseRS_2985 glutamate synthase (ferredoxin); glutamate synthase 2453762 5539381 Rcas_1903 Roseiflexus castenholzii DSM 13941 glutamate synthase YP_001432011.1 2449122 D 383372 CDS YP_001432012.1 156741883 5539382 complement(2453865..2454182) 1 NC_009767.1 KEGG: rrs:RoseRS_4498 hypothetical protein; hypothetical protein 2454182 5539382 Rcas_1904 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432012.1 2453865 R 383372 CDS YP_001432013.1 156741884 5539383 complement(2454179..2454475) 1 NC_009767.1 hypothetical protein 2454475 5539383 Rcas_1905 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432013.1 2454179 R 383372 CDS YP_001432014.1 156741885 5539384 2454579..2454848 1 NC_009767.1 hypothetical protein 2454848 5539384 Rcas_1906 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432014.1 2454579 D 383372 CDS YP_001432015.1 156741886 5539385 complement(2455389..2455628) 1 NC_009767.1 hypothetical protein 2455628 5539385 Rcas_1907 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432015.1 2455389 R 383372 CDS YP_001432016.1 156741887 5539386 2455686..2455871 1 NC_009767.1 hypothetical protein 2455871 5539386 Rcas_1908 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432016.1 2455686 D 383372 CDS YP_001432017.1 156741888 5539387 complement(2456043..2456636) 1 NC_009767.1 hypothetical protein 2456636 5539387 Rcas_1909 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432017.1 2456043 R 383372 CDS YP_001432018.1 156741889 5539388 complement(2457022..2457423) 1 NC_009767.1 hypothetical protein 2457423 5539388 Rcas_1910 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432018.1 2457022 R 383372 CDS YP_001432019.1 156741890 5539389 complement(2457575..2458051) 1 NC_009767.1 hypothetical protein 2458051 5539389 Rcas_1911 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432019.1 2457575 R 383372 CDS YP_001432020.1 156741891 5539390 complement(2458243..2458962) 1 NC_009767.1 KEGG: dge:Dgeo_2791 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2458962 5539390 Rcas_1912 Roseiflexus castenholzii DSM 13941 LuxR family transcriptional regulator YP_001432020.1 2458243 R 383372 CDS YP_001432021.1 156741892 5539391 complement(2459068..2459823) 1 NC_009767.1 hypothetical protein 2459823 5539391 Rcas_1913 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432021.1 2459068 R 383372 CDS YP_001432022.1 156741893 5539392 complement(2459833..2460723) 1 NC_009767.1 hypothetical protein 2460723 5539392 Rcas_1914 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432022.1 2459833 R 383372 CDS YP_001432023.1 156741894 5539393 complement(2460765..2461352) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sth:STH169 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor 2461352 5539393 Rcas_1915 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001432023.1 2460765 R 383372 CDS YP_001432024.1 156741895 5539394 complement(2461345..2462151) 1 NC_009767.1 KEGG: dge:Dgeo_2791 transcriptional regulator, LuxR family; response regulator receiver protein 2462151 5539394 Rcas_1916 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001432024.1 2461345 R 383372 CDS YP_001432025.1 156741896 5539395 complement(2462136..2462399) 1 NC_009767.1 KEGG: rrs:RoseRS_1219 hypothetical protein; hypothetical protein 2462399 5539395 Rcas_1917 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432025.1 2462136 R 383372 CDS YP_001432026.1 156741897 5539396 complement(2462845..2463042) 1 NC_009767.1 hypothetical protein 2463042 5539396 Rcas_1918 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432026.1 2462845 R 383372 CDS YP_001432027.1 156741898 5539397 complement(2463095..2463478) 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3040 HEPN domain protein; HEPN domain-containing protein 2463478 5539397 Rcas_1919 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001432027.1 2463095 R 383372 CDS YP_001432028.1 156741899 5539398 complement(2463462..2463812) 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3041 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2463812 5539398 Rcas_1920 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001432028.1 2463462 R 383372 CDS YP_001432029.1 156741900 5539399 complement(2463821..2464141) 1 NC_009767.1 hypothetical protein 2464141 5539399 Rcas_1921 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432029.1 2463821 R 383372 CDS YP_001432030.1 156741901 5539400 complement(2464126..2464389) 1 NC_009767.1 KEGG: rrs:RoseRS_1219 hypothetical protein; hypothetical protein 2464389 5539400 Rcas_1922 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432030.1 2464126 R 383372 CDS YP_001432031.1 156741902 5539401 complement(2464835..2465896) 1 NC_009767.1 hypothetical protein 2465896 5539401 Rcas_1923 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432031.1 2464835 R 383372 CDS YP_001432032.1 156741903 5539402 complement(2465902..2466510) 1 NC_009767.1 hypothetical protein 2466510 5539402 Rcas_1924 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432032.1 2465902 R 383372 CDS YP_001432033.1 156741904 5539403 2466814..2467428 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4503 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2467428 5539403 Rcas_1925 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001432033.1 2466814 D 383372 CDS YP_001432034.1 156741905 5539404 2467425..2467952 1 NC_009767.1 KEGG: ctp42; conserved membrane-spanning protein; hypothetical protein 2467952 5539404 Rcas_1926 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432034.1 2467425 D 383372 CDS YP_001432035.1 156741906 5539405 2467949..2468419 1 NC_009767.1 hypothetical protein 2468419 5539405 Rcas_1927 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432035.1 2467949 D 383372 CDS YP_001432036.1 156741907 5539406 2468496..2468774 1 NC_009767.1 hypothetical protein 2468774 5539406 Rcas_1928 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432036.1 2468496 D 383372 CDS YP_001432037.1 156741908 5539407 2468775..2469623 1 NC_009767.1 KEGG: ctc:pE88_39 hypothetical membrane-spanning protein; hypothetical protein 2469623 5539407 Rcas_1929 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432037.1 2468775 D 383372 CDS YP_001432038.1 156741909 5539409 2470645..2472432 1 NC_009767.1 KEGG: rrs:RoseRS_2968 hypothetical protein; hypothetical protein 2472432 5539409 Rcas_1931 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432038.1 2470645 D 383372 CDS YP_001432039.1 156741910 5539410 2473023..2474318 1 NC_009767.1 PFAM: glycoside hydrolase family 1; KEGG: rrs:RoseRS_2967 glycoside hydrolase, family 1; glycoside hydrolase family protein 2474318 5539410 Rcas_1932 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001432039.1 2473023 D 383372 CDS YP_001432040.1 156741911 5539411 2474939..2475676 1 NC_009767.1 PFAM: O-methyltransferase family 3; KEGG: rrs:RoseRS_2965 O-methyltransferase, family 3; O-methyltransferase family protein 2475676 5539411 Rcas_1933 Roseiflexus castenholzii DSM 13941 O-methyltransferase family protein YP_001432040.1 2474939 D 383372 CDS YP_001432041.1 156741912 5539412 2475938..2478013 1 NC_009767.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_2964 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 2478013 5539412 Rcas_1934 Roseiflexus castenholzii DSM 13941 NADH:flavin oxidoreductase YP_001432041.1 2475938 D 383372 CDS YP_001432042.1 156741913 5539413 complement(2478018..2478248) 1 NC_009767.1 hypothetical protein 2478248 5539413 Rcas_1935 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432042.1 2478018 R 383372 CDS YP_001432043.1 156741914 5539414 complement(2478442..2481084) 1 NC_009767.1 PFAM: regulatory protein LuxR; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2963 regulatory protein, LuxR; ATP-dependent transcription regulator LuxR 2481084 5539414 Rcas_1936 Roseiflexus castenholzii DSM 13941 ATP-dependent transcription regulator LuxR YP_001432043.1 2478442 R 383372 CDS YP_001432044.1 156741915 5539415 complement(2481379..2482188) 1 NC_009767.1 PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_2962 rhodanese domain protein; rhodanese domain-containing protein 2482188 5539415 Rcas_1937 Roseiflexus castenholzii DSM 13941 rhodanese domain-containing protein YP_001432044.1 2481379 R 383372 CDS YP_001432045.1 156741916 5539416 complement(2482311..2482976) 1 NC_009767.1 hypothetical protein 2482976 5539416 Rcas_1938 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432045.1 2482311 R 383372 CDS YP_001432046.1 156741917 5539417 complement(2482983..2484110) 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0953 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 2484110 5539417 Rcas_1939 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001432046.1 2482983 R 383372 CDS YP_001432047.1 156741918 5539418 complement(2484444..2484830) 1 NC_009767.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: rrs:RoseRS_2960 endoribonuclease L-PSP; endoribonuclease L-PSP 2484830 5539418 Rcas_1940 Roseiflexus castenholzii DSM 13941 endoribonuclease L-PSP YP_001432047.1 2484444 R 383372 CDS YP_001432048.1 156741919 5539419 2484902..2487766 1 NC_009767.1 KEGG: rrs:RoseRS_2959 hypothetical protein; hypothetical protein 2487766 5539419 Rcas_1941 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432048.1 2484902 D 383372 CDS YP_001432049.1 156741920 5539420 2487912..2489144 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2958 glycosyl transferase, group 1; group 1 glycosyl transferase 2489144 5539420 Rcas_1942 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432049.1 2487912 D 383372 CDS YP_001432050.1 156741921 5539421 2489617..2491797 1 NC_009767.1 KEGG: rrs:RoseRS_2957 membrane protein-like protein; hypothetical protein 2491797 5539421 Rcas_1943 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432050.1 2489617 D 383372 CDS YP_001432051.1 156741922 5539422 2492200..2492811 1 NC_009767.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rrs:RoseRS_2955 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2492811 5539422 Rcas_1944 Roseiflexus castenholzii DSM 13941 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001432051.1 2492200 D 383372 CDS YP_001432052.1 156741923 5539423 2493536..2493931 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_2953 protein of unknown function DUF86; hypothetical protein 2493931 5539423 Rcas_1945 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432052.1 2493536 D 383372 CDS YP_001432053.1 156741924 5539424 2494143..2496530 1 NC_009767.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: rrs:RoseRS_2952 transketolase, central region; transketolase central region 2496530 5539424 Rcas_1946 Roseiflexus castenholzii DSM 13941 transketolase central region YP_001432053.1 2494143 D 383372 CDS YP_001432054.1 156741925 5539425 complement(2496659..2497021) 1 NC_009767.1 KEGG: rrs:RoseRS_2951 hypothetical protein; hypothetical protein 2497021 5539425 Rcas_1947 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432054.1 2496659 R 383372 CDS YP_001432055.1 156741926 5539426 2497155..2497940 1 NC_009767.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2497940 trpA 5539426 trpA Roseiflexus castenholzii DSM 13941 tryptophan synthase subunit alpha YP_001432055.1 2497155 D 383372 CDS YP_001432056.1 156741927 5539427 2498638..2499564 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2949 glycosyl transferase, family 2; glycosyl transferase family protein 2499564 5539427 Rcas_1949 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001432056.1 2498638 D 383372 CDS YP_001432057.1 156741928 5539428 2499587..2500999 1 NC_009767.1 PFAM: sugar transferase; KEGG: rrs:RoseRS_2948 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase 2500999 5539428 Rcas_1950 Roseiflexus castenholzii DSM 13941 UDP-phosphate galactose phosphotransferase YP_001432057.1 2499587 D 383372 CDS YP_001432058.1 156741929 5539429 2500999..2502471 1 NC_009767.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2502471 gatA 5539429 gatA Roseiflexus castenholzii DSM 13941 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001432058.1 2500999 D 383372 CDS YP_001432059.1 156741930 5539430 complement(2505172..2505885) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2937 protein of unknown function DUF820; hypothetical protein 2505885 5539430 Rcas_1952 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432059.1 2505172 R 383372 CDS YP_001432060.1 156741931 5539431 complement(2505882..2506607) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2936 protein of unknown function DUF820; hypothetical protein 2506607 5539431 Rcas_1953 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432060.1 2505882 R 383372 CDS YP_001432061.1 156741932 5539432 complement(2506669..2507103) 1 NC_009767.1 KEGG: rrs:RoseRS_2932 hypothetical protein; hypothetical protein 2507103 5539432 Rcas_1954 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432061.1 2506669 R 383372 CDS YP_001432062.1 156741933 5539433 complement(2507104..2507772) 1 NC_009767.1 PFAM: phospholipase/Carboxylesterase; KEGG: rrs:RoseRS_2931 phospholipase/carboxylesterase; phospholipase/carboxylesterase 2507772 5539433 Rcas_1955 Roseiflexus castenholzii DSM 13941 phospholipase/carboxylesterase YP_001432062.1 2507104 R 383372 CDS YP_001432063.1 156741934 5539434 complement(2507717..2508196) 1 NC_009767.1 KEGG: rrs:RoseRS_2930 hypothetical protein; hypothetical protein 2508196 5539434 Rcas_1956 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432063.1 2507717 R 383372 CDS YP_001432064.1 156741935 5539436 2508683..2509069 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: gme:Gmet_0217 HEPN; HEPN domain-containing protein 2509069 5539436 Rcas_1958 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001432064.1 2508683 D 383372 CDS YP_001432065.1 156741936 5539437 2509104..2509727 1 NC_009767.1 KEGG: rrs:RoseRS_2929 hypothetical protein; hypothetical protein 2509727 5539437 Rcas_1959 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432065.1 2509104 D 383372 CDS YP_001432066.1 156741937 5539438 complement(2509708..2511285) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2928 drug resistance transporter, EmrB/QacA subfamily; major facilitator transporter 2511285 5539438 Rcas_1960 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432066.1 2509708 R 383372 CDS YP_001432067.1 156741938 5539439 complement(2511305..2512030) 1 NC_009767.1 KEGG: rrs:RoseRS_2927 hypothetical protein; hypothetical protein 2512030 5539439 Rcas_1961 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432067.1 2511305 R 383372 CDS YP_001432068.1 156741939 5539440 complement(2512057..2512479) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2926 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2512479 5539440 Rcas_1962 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001432068.1 2512057 R 383372 CDS YP_001432069.1 156741940 5539441 2513045..2514385 1 NC_009767.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_2925 amine oxidase; amine oxidase 2514385 5539441 Rcas_1963 Roseiflexus castenholzii DSM 13941 amine oxidase YP_001432069.1 2513045 D 383372 CDS YP_001432070.1 156741941 5539442 complement(2514355..2515380) 1 NC_009767.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: rrs:RoseRS_2285 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 2515380 5539442 Rcas_1964 Roseiflexus castenholzii DSM 13941 C4-dicarboxylate transporter/malic acid transport protein YP_001432070.1 2514355 R 383372 CDS YP_001432071.1 156741942 5539443 complement(2515520..2517169) 1 NC_009767.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: rrs:RoseRS_2711 YidE/YbjL duplication; hypothetical protein 2517169 5539443 Rcas_1965 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432071.1 2515520 R 383372 CDS YP_001432072.1 156741943 5539444 2517293..2517472 1 NC_009767.1 KEGG: rrs:RoseRS_2710 hypothetical protein; hypothetical protein 2517472 5539444 Rcas_1966 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432072.1 2517293 D 383372 CDS YP_001432073.1 156741944 5539445 complement(2517615..2518040) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_2709 response regulator receiver protein; response regulator receiver protein 2518040 5539445 Rcas_1967 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001432073.1 2517615 R 383372 CDS YP_001432074.1 156741945 5539446 2518158..2519744 1 NC_009767.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: rrs:RoseRS_2708 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 2519744 5539446 Rcas_1968 Roseiflexus castenholzii DSM 13941 5-oxoprolinase YP_001432074.1 2518158 D 383372 CDS YP_001432075.1 156741946 5539447 complement(2519824..2521212) 1 NC_009767.1 KEGG: rrs:RoseRS_2707 hypothetical protein; hypothetical protein 2521212 5539447 Rcas_1969 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432075.1 2519824 R 383372 CDS YP_001432076.1 156741947 5539448 2521295..2522137 1 NC_009767.1 PFAM: protein of unknown function DUF422; KEGG: rrs:RoseRS_2706 protein of unknown function DUF422; hypothetical protein 2522137 5539448 Rcas_1970 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432076.1 2521295 D 383372 CDS YP_001432077.1 156741948 5539449 complement(2522019..2522876) 1 NC_009767.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_2705 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2522876 5539449 Rcas_1971 Roseiflexus castenholzii DSM 13941 phospholipid/glycerol acyltransferase YP_001432077.1 2522019 R 383372 CDS YP_001432078.1 156741949 5539450 complement(2523207..2525750) 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2704 von Willebrand factor, type A; von Willebrand factor A 2525750 5539450 Rcas_1972 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001432078.1 2523207 R 383372 CDS YP_001432079.1 156741950 5539451 complement(2525747..2527591) 1 NC_009767.1 TIGRFAM: conserved hypothetical membrane protein; PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2703 hypothetical protein; hypothetical protein 2527591 5539451 Rcas_1973 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432079.1 2525747 R 383372 CDS YP_001432080.1 156741951 5539452 complement(2527595..2528518) 1 NC_009767.1 KEGG: rrs:RoseRS_2702 hypothetical protein; hypothetical protein 2528518 5539452 Rcas_1974 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432080.1 2527595 R 383372 CDS YP_001432081.1 156741952 5539453 complement(2528490..2529902) 1 NC_009767.1 KEGG: rrs:RoseRS_2701 hypothetical protein; hypothetical protein 2529902 5539453 Rcas_1975 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432081.1 2528490 R 383372 CDS YP_001432082.1 156741953 5539454 complement(2529902..2531317) 1 NC_009767.1 KEGG: rrs:RoseRS_2700 hypothetical protein; hypothetical protein 2531317 5539454 Rcas_1976 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432082.1 2529902 R 383372 CDS YP_001432083.1 156741954 5539455 2532265..2534517 1 NC_009767.1 TIGRFAM: CRISPR-associated protein, Csm1 family; KEGG: csc:Csac_0075 CRISPR-associated protein, Csm1 family; CRISPR-associated Csm1 family protein 2534517 5539455 Rcas_1977 Roseiflexus castenholzii DSM 13941 CRISPR-associated Csm1 family protein YP_001432083.1 2532265 D 383372 CDS YP_001432084.1 156741955 5539456 2534514..2534996 1 NC_009767.1 TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: protein of unknown function DUF310; KEGG: chy:CHY_2143 CRISPR-associated protein, Csm2 family; CRISPR-associated Csm2 family protein 2534996 5539456 Rcas_1978 Roseiflexus castenholzii DSM 13941 CRISPR-associated Csm2 family protein YP_001432084.1 2534514 D 383372 CDS YP_001432085.1 156741956 5539457 2535012..2535848 1 NC_009767.1 TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324; KEGG: tpt:Tpet_1095 CRISPR-associated RAMP protein, Csm3 family; CRISPR-associated RAMP Csm3 family protein 2535848 5539457 Rcas_1979 Roseiflexus castenholzii DSM 13941 CRISPR-associated RAMP Csm3 family protein YP_001432085.1 2535012 D 383372 CDS YP_001432086.1 156741957 5539458 2535861..2537003 1 NC_009767.1 TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; KEGG: chy:CHY_2141 CRISPR-associated RAMP protein, Csm4 family; CRISPR-associated RAMP Csm4 family protein 2537003 5539458 Rcas_1980 Roseiflexus castenholzii DSM 13941 CRISPR-associated RAMP Csm4 family protein YP_001432086.1 2535861 D 383372 CDS YP_001432087.1 156741958 5539459 2537003..2538433 1 NC_009767.1 TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; KEGG: ptr:743860 hypothetical protein LOC743860; CRISPR-associated RAMP Csm5 family protein 2538433 5539459 Rcas_1981 Roseiflexus castenholzii DSM 13941 CRISPR-associated RAMP Csm5 family protein YP_001432087.1 2537003 D 383372 CDS YP_001432088.1 156741959 5539460 2538727..2540193 1 NC_009767.1 KEGG: mka:MK1318 hypothetical protein; hypothetical protein 2540193 5539460 Rcas_1982 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432088.1 2538727 D 383372 CDS YP_001432089.1 156741960 5539461 2541533..2542396 1 NC_009767.1 KEGG: cya:CYA_0883 CRISPR-associated protein Cas6; hypothetical protein 2542396 5539461 Rcas_1983 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432089.1 2541533 D 383372 CDS YP_001432090.1 156741961 5539462 2542652..2543671 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: drm:Dred_1625 CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein 2543671 5539462 Rcas_1984 Roseiflexus castenholzii DSM 13941 CRISPR-associated Cas1 family protein YP_001432090.1 2542652 D 383372 CDS YP_001432091.1 156741962 5539463 2543682..2543963 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: tth:TT_P0101 hypothetical protein; CRISPR-associated Cas2 family protein 2543963 5539463 Rcas_1985 Roseiflexus castenholzii DSM 13941 CRISPR-associated Cas2 family protein YP_001432091.1 2543682 D 383372 CDS YP_001432092.1 156741963 5539464 2549978..2551408 1 NC_009767.1 hypothetical protein 2551408 5539464 Rcas_1986 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432092.1 2549978 D 383372 CDS YP_001432093.1 156741964 5539465 2552108..2552740 1 NC_009767.1 KEGG: rrs:RoseRS_1721 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 2552740 5539465 Rcas_1987 Roseiflexus castenholzii DSM 13941 orotate phosphoribosyltransferase YP_001432093.1 2552108 D 383372 CDS YP_001432094.1 156741965 5539466 2552774..2553898 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1720 glycosyl transferase, group 1; group 1 glycosyl transferase 2553898 5539466 Rcas_1988 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432094.1 2552774 D 383372 CDS YP_001432095.1 156741966 5539467 2554213..2554500 1 NC_009767.1 hypothetical protein 2554500 5539467 Rcas_1989 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432095.1 2554213 D 383372 CDS YP_001432096.1 156741967 5539468 2554644..2555816 1 NC_009767.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: rrs:RoseRS_1719 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2555816 5539468 Rcas_1990 Roseiflexus castenholzii DSM 13941 iron-containing alcohol dehydrogenase YP_001432096.1 2554644 D 383372 CDS YP_001432097.1 156741968 5539469 2555979..2557322 1 NC_009767.1 KEGG: cya:CYA_1695 hypothetical protein; hypothetical protein 2557322 5539469 Rcas_1991 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432097.1 2555979 D 383372 CDS YP_001432098.1 156741969 5539470 2557326..2558177 1 NC_009767.1 KEGG: rrs:RoseRS_0853 membrane protein-like protein; hypothetical protein 2558177 5539470 Rcas_1992 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432098.1 2557326 D 383372 CDS YP_001432099.1 156741970 5539471 2558261..2558686 1 NC_009767.1 KEGG: rrs:RoseRS_1717 hypothetical protein; hypothetical protein 2558686 5539471 Rcas_1993 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432099.1 2558261 D 383372 CDS YP_001432100.1 156741971 5539472 2559648..2561591 1 NC_009767.1 PFAM: protein of unknown function DUF839; KEGG: rrs:RoseRS_1716 protein of unknown function DUF839; hypothetical protein 2561591 5539472 Rcas_1994 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432100.1 2559648 D 383372 CDS YP_001432101.1 156741972 5539473 complement(2561676..2562182) 1 NC_009767.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rrs:RoseRS_1715 HNH endonuclease; HNH endonuclease 2562182 5539473 Rcas_1995 Roseiflexus castenholzii DSM 13941 HNH endonuclease YP_001432101.1 2561676 R 383372 CDS YP_001432102.1 156741973 5539474 2562894..2564477 1 NC_009767.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_1714 cell envelope-related transcriptional attenuator; cell envelope-like transcriptional attenuator 2564477 5539474 Rcas_1996 Roseiflexus castenholzii DSM 13941 cell envelope-like transcriptional attenuator YP_001432102.1 2562894 D 383372 CDS YP_001432103.1 156741974 5539475 2564488..2565153 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1713 protein of unknown function DUF820; hypothetical protein 2565153 5539475 Rcas_1997 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432103.1 2564488 D 383372 CDS YP_001432104.1 156741975 5539476 2565164..2566609 1 NC_009767.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_1712 alpha amylase, catalytic region; alpha amylase 2566609 5539476 Rcas_1998 Roseiflexus castenholzii DSM 13941 alpha amylase YP_001432104.1 2565164 D 383372 CDS YP_001432105.1 156741976 5539477 2566606..2567295 1 NC_009767.1 KEGG: rrs:RoseRS_1711 hypothetical protein; hypothetical protein 2567295 5539477 Rcas_1999 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432105.1 2566606 D 383372 CDS YP_001432106.1 156741977 5539478 2567786..2568751 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_1710 anti-sigma-factor antagonist; anti-sigma-factor antagonist 2568751 5539478 Rcas_2000 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001432106.1 2567786 D 383372 CDS YP_001432107.1 156741978 5539479 2570928..2571290 1 NC_009767.1 PFAM: ribosomal protein L21; KEGG: rrs:RoseRS_2695 ribosomal protein L21; 50S ribosomal protein L21 2571290 rplU 5539479 rplU Roseiflexus castenholzii DSM 13941 50S ribosomal protein L21 YP_001432107.1 2570928 D 383372 CDS YP_001432108.1 156741979 5539480 2571280..2571537 1 NC_009767.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 2571537 rpmA 5539480 rpmA Roseiflexus castenholzii DSM 13941 50S ribosomal protein L27 YP_001432108.1 2571280 D 383372 CDS YP_001432109.1 156741980 5539481 2571548..2571850 1 NC_009767.1 PFAM: ribosomal protein L31; KEGG: rrs:RoseRS_2697 ribosomal protein L31; 50S ribosomal protein L31 2571850 5539481 Rcas_2003 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L31 YP_001432109.1 2571548 D 383372 CDS YP_001432110.1 156741981 5539482 complement(2571914..2572879) 1 NC_009767.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: rrs:RoseRS_2698 helix-turn-helix, type 11 domain protein; helix-turn-helix type 11 domain-containing protein 2572879 5539482 Rcas_2004 Roseiflexus castenholzii DSM 13941 helix-turn-helix type 11 domain-containing protein YP_001432110.1 2571914 R 383372 CDS YP_001432111.1 156741982 5539483 complement(2572895..2573335) 1 NC_009767.1 KEGG: rrs:RoseRS_2699 hypothetical protein; hypothetical protein 2573335 5539483 Rcas_2005 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432111.1 2572895 R 383372 CDS YP_001432112.1 156741983 5539484 2573564..2574817 1 NC_009767.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rrs:RoseRS_1722 Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase 2574817 5539484 Rcas_2006 Roseiflexus castenholzii DSM 13941 Glu/Leu/Phe/Val dehydrogenase YP_001432112.1 2573564 D 383372 CDS YP_001432113.1 156741984 5539485 2574824..2575198 1 NC_009767.1 PFAM: protein of unknown function UPF0102; KEGG: rrs:RoseRS_1723 protein of unknown function UPF0102; hypothetical protein 2575198 5539485 Rcas_2007 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432113.1 2574824 D 383372 CDS YP_001432114.1 156741985 5539486 2575236..2575796 1 NC_009767.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_1724 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 2575796 5539486 Rcas_2008 Roseiflexus castenholzii DSM 13941 hexapaptide repeat-containing transferase YP_001432114.1 2575236 D 383372 CDS YP_001432115.1 156741986 5539487 2575835..2576266 1 NC_009767.1 PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_1725 signal-transduction protein with CBS domains; hypothetical protein 2576266 5539487 Rcas_2009 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432115.1 2575835 D 383372 CDS YP_001432116.1 156741987 5539488 2576295..2577407 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0375 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 2577407 5539488 Rcas_2010 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001432116.1 2576295 D 383372 CDS YP_001432117.1 156741988 5539489 complement(2577544..2578908) 1 NC_009767.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_1726 dihydrolipoyllysine-residue succinyltransferase; dihydrolipoyllysine-residue succinyltransferase 2578908 5539489 Rcas_2011 Roseiflexus castenholzii DSM 13941 dihydrolipoyllysine-residue succinyltransferase YP_001432117.1 2577544 R 383372 CDS YP_001432118.1 156741989 5539490 complement(2578920..2579888) 1 NC_009767.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: rrs:RoseRS_1727 transketolase, central region; transketolase central region 2579888 5539490 Rcas_2012 Roseiflexus castenholzii DSM 13941 transketolase central region YP_001432118.1 2578920 R 383372 CDS YP_001432119.1 156741990 5539491 complement(2579892..2580953) 1 NC_009767.1 PFAM: dehydrogenase E1 component; KEGG: rrs:RoseRS_1728 pyruvate dehydrogenase (acetyl-transferring); pyruvate dehydrogenase 2580953 5539491 Rcas_2013 Roseiflexus castenholzii DSM 13941 pyruvate dehydrogenase YP_001432119.1 2579892 R 383372 CDS YP_001432120.1 156741991 5539492 complement(2581340..2582257) 1 NC_009767.1 KEGG: rrs:RoseRS_1729 hypothetical protein; hypothetical protein 2582257 5539492 Rcas_2014 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432120.1 2581340 R 383372 CDS YP_001432121.1 156741992 5539493 2582455..2583690 1 NC_009767.1 PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_1730 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 2583690 5539493 Rcas_2015 Roseiflexus castenholzii DSM 13941 RNA-binding S1 domain-containing protein YP_001432121.1 2582455 D 383372 CDS YP_001432122.1 156741993 5539494 2583779..2586322 1 NC_009767.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1731 ATPase AAA-2 domain protein; ATPase 2586322 5539494 Rcas_2016 Roseiflexus castenholzii DSM 13941 ATPase YP_001432122.1 2583779 D 383372 CDS YP_001432123.1 156741994 5539495 2586585..2587979 1 NC_009767.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2587979 5539495 Rcas_2017 Roseiflexus castenholzii DSM 13941 DNA repair protein RadA YP_001432123.1 2586585 D 383372 CDS YP_001432124.1 156741995 5539496 2587963..2589057 1 NC_009767.1 PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rrs:RoseRS_1733 PilT protein domain protein; twitching motility protein PilT 2589057 5539496 Rcas_2018 Roseiflexus castenholzii DSM 13941 twitching motility protein PilT YP_001432124.1 2587963 D 383372 CDS YP_001432125.1 156741996 5539497 2589471..2590868 1 NC_009767.1 PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_1738 aminotransferase class-III; class III aminotransferase 2590868 5539497 Rcas_2019 Roseiflexus castenholzii DSM 13941 class III aminotransferase YP_001432125.1 2589471 D 383372 CDS YP_001432126.1 156741997 5539498 complement(2590872..2591375) 1 NC_009767.1 KEGG: rrs:RoseRS_1739 hypothetical protein; hypothetical protein 2591375 5539498 Rcas_2020 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432126.1 2590872 R 383372 CDS YP_001432127.1 156741998 5539499 2591656..2593830 1 NC_009767.1 PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_1740 glycoside hydrolase family 2, sugar binding; glycoside hydrolase family protein 2593830 5539499 Rcas_2021 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001432127.1 2591656 D 383372 CDS YP_001432128.1 156741999 5539500 2593844..2595034 1 NC_009767.1 KEGG: rrs:RoseRS_1741 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2595034 5539500 Rcas_2022 Roseiflexus castenholzii DSM 13941 amidohydrolase YP_001432128.1 2593844 D 383372 CDS YP_001432129.1 156742000 5539501 complement(2595280..2595861) 1 NC_009767.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rrs:RoseRS_1742 intracellular protease, PfpI family; PfpI family intracellular peptidase 2595861 5539501 Rcas_2023 Roseiflexus castenholzii DSM 13941 PfpI family intracellular peptidase YP_001432129.1 2595280 R 383372 CDS YP_001432130.1 156742001 5539502 2596402..2597874 1 NC_009767.1 KEGG: rrs:RoseRS_1744 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; protoporphyrinogen oxidase 2597874 5539502 Rcas_2024 Roseiflexus castenholzii DSM 13941 protoporphyrinogen oxidase YP_001432130.1 2596402 D 383372 CDS YP_001432131.1 156742002 5539503 2597924..2598544 1 NC_009767.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein MerR; KEGG: rrs:RoseRS_1745 DNA binding domain, excisionase family; DNA binding domain-containing protein 2598544 5539503 Rcas_2025 Roseiflexus castenholzii DSM 13941 DNA binding domain-containing protein YP_001432131.1 2597924 D 383372 CDS YP_001432132.1 156742003 5539504 2598556..2599833 1 NC_009767.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2599833 hemA 5539504 hemA Roseiflexus castenholzii DSM 13941 glutamyl-tRNA reductase YP_001432132.1 2598556 D 383372 CDS YP_001432133.1 156742004 5539505 2599862..2600563 1 NC_009767.1 PFAM: Chlorite dismutase; KEGG: rrs:RoseRS_1747 chlorite dismutase; chlorite dismutase 2600563 5539505 Rcas_2027 Roseiflexus castenholzii DSM 13941 chlorite dismutase YP_001432133.1 2599862 D 383372 CDS YP_001432134.1 156742005 5539506 2600567..2601625 1 NC_009767.1 KEGG: rrs:RoseRS_1748 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 2601625 5539506 Rcas_2028 Roseiflexus castenholzii DSM 13941 uroporphyrinogen decarboxylase YP_001432134.1 2600567 D 383372 CDS YP_001432135.1 156742006 5539507 2601618..2602559 1 NC_009767.1 PFAM: ferrochelatase; KEGG: rrs:RoseRS_1749 ferrochelatase; ferrochelatase 2602559 5539507 Rcas_2029 Roseiflexus castenholzii DSM 13941 ferrochelatase YP_001432135.1 2601618 D 383372 CDS YP_001432136.1 156742007 5539508 2602556..2603467 1 NC_009767.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2603467 hemC 5539508 hemC Roseiflexus castenholzii DSM 13941 porphobilinogen deaminase YP_001432136.1 2602556 D 383372 CDS YP_001432137.1 156742008 5539509 2603472..2604281 1 NC_009767.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rrs:RoseRS_1751 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 2604281 5539509 Rcas_2031 Roseiflexus castenholzii DSM 13941 uroporphyrinogen III synthase HEM4 YP_001432137.1 2603472 D 383372 CDS YP_001432138.1 156742009 5539510 2604866..2605849 1 NC_009767.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2605849 5539510 Rcas_2032 Roseiflexus castenholzii DSM 13941 delta-aminolevulinic acid dehydratase YP_001432138.1 2604866 D 383372 CDS YP_001432139.1 156742010 5539511 2606015..2607319 1 NC_009767.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2607319 5539511 Rcas_2033 Roseiflexus castenholzii DSM 13941 glutamate-1-semialdehyde aminotransferase YP_001432139.1 2606015 D 383372 CDS YP_001432140.1 156742011 5539512 2607419..2608534 1 NC_009767.1 KEGG: rrs:RoseRS_1755 hypothetical protein; hypothetical protein 2608534 5539512 Rcas_2034 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432140.1 2607419 D 383372 CDS YP_001432141.1 156742012 5539513 2609200..2610036 1 NC_009767.1 PFAM: protein of unknown function DUF574; KEGG: rrs:RoseRS_1762 protein of unknown function DUF574; hypothetical protein 2610036 5539513 Rcas_2035 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432141.1 2609200 D 383372 CDS YP_001432142.1 156742013 5539514 2610130..2610804 1 NC_009767.1 KEGG: rrs:RoseRS_1763 hypothetical protein; hypothetical protein 2610804 5539514 Rcas_2036 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432142.1 2610130 D 383372 CDS YP_001432143.1 156742014 5539515 complement(2610863..2611804) 1 NC_009767.1 KEGG: rrs:RoseRS_1761 transmembrane anti-sigma factor; transmembrane anti-sigma factor 2611804 5539515 Rcas_2037 Roseiflexus castenholzii DSM 13941 transmembrane anti-sigma factor YP_001432143.1 2610863 R 383372 CDS YP_001432144.1 156742015 5539516 complement(2611821..2612438) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1760 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 2612438 5539516 Rcas_2038 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001432144.1 2611821 R 383372 CDS YP_001432145.1 156742016 5539517 complement(2612614..2613762) 1 NC_009767.1 KEGG: rrs:RoseRS_1759 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 2613762 5539517 Rcas_2039 Roseiflexus castenholzii DSM 13941 homoserine O-acetyltransferase YP_001432145.1 2612614 R 383372 CDS YP_001432146.1 156742017 5539518 complement(2613951..2615237) 1 NC_009767.1 KEGG: rrs:RoseRS_1758 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 2615237 5539518 Rcas_2040 Roseiflexus castenholzii DSM 13941 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001432146.1 2613951 R 383372 CDS YP_001432147.1 156742018 5539519 2615887..2616255 1 NC_009767.1 KEGG: rrs:RoseRS_1757 hypothetical protein; hypothetical protein 2616255 5539519 Rcas_2041 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432147.1 2615887 D 383372 CDS YP_001432148.1 156742019 5539520 2616865..2618889 1 NC_009767.1 KEGG: yen:YE0550 glycerol metabolism operon regulatory protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; Fis family GAF modulated sigma54 specific transcriptional regulator 2618889 5539520 Rcas_2042 Roseiflexus castenholzii DSM 13941 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001432148.1 2616865 D 383372 CDS YP_001432149.1 156742020 5539521 2619351..2620073 1 NC_009767.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: rrs:RoseRS_1765 MIP family channel protein; MIP family channel protein 2620073 5539521 Rcas_2043 Roseiflexus castenholzii DSM 13941 MIP family channel protein YP_001432149.1 2619351 D 383372 CDS YP_001432150.1 156742021 5539522 2620209..2621210 1 NC_009767.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2621210 5539522 Rcas_2044 Roseiflexus castenholzii DSM 13941 dihydroxyacetone kinase subunit DhaK YP_001432150.1 2620209 D 383372 CDS YP_001432151.1 156742022 5539523 2621214..2621846 1 NC_009767.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: rrs:RoseRS_1767 dihydroxyacetone kinase, L subunit; dihydroxyacetone kinase subunit L 2621846 5539523 Rcas_2045 Roseiflexus castenholzii DSM 13941 dihydroxyacetone kinase subunit L YP_001432151.1 2621214 D 383372 CDS YP_001432152.1 156742023 5539525 2623529..2624086 1 NC_009767.1 SMART: ribosomal RNA adenine methylase transferase; KEGG: rrs:RoseRS_1769 hypothetical protein; ribosomal RNA adenine methylase transferase 2624086 5539525 Rcas_2047 Roseiflexus castenholzii DSM 13941 ribosomal RNA adenine methylase transferase YP_001432152.1 2623529 D 383372 CDS YP_001432153.1 156742024 5539526 2624253..2626769 1 NC_009767.1 TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; dihydroxyacetone kinase, phosphotransfer subunit; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; PTS system fructose subfamily IIA component; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: rrs:RoseRS_1770 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 2626769 5539526 Rcas_2048 Roseiflexus castenholzii DSM 13941 phosphoenolpyruvate-protein phosphotransferase YP_001432153.1 2624253 D 383372 CDS YP_001432154.1 156742025 5539527 complement(2627211..2627627) 1 NC_009767.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rrs:RoseRS_1771 single-strand binding protein; single-strand binding protein 2627627 5539527 Rcas_2049 Roseiflexus castenholzii DSM 13941 single-strand binding protein YP_001432154.1 2627211 R 383372 CDS YP_001432155.1 156742026 5539528 complement(2628970..2629662) 1 NC_009767.1 KEGG: rrs:RoseRS_1772 hypothetical protein; hypothetical protein 2629662 5539528 Rcas_2050 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432155.1 2628970 R 383372 CDS YP_001432156.1 156742027 5539531 complement(2630057..2630659) 1 NC_009767.1 PFAM: Disulphide bond formation protein DsbB; KEGG: rrs:RoseRS_1773 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB 2630659 5539531 Rcas_2051 Roseiflexus castenholzii DSM 13941 disulfide bond formation protein DsbB YP_001432156.1 2630057 R 383372 CDS YP_001432157.1 156742028 5539532 2630784..2631401 1 NC_009767.1 KEGG: rrs:RoseRS_1774 pyrrolidone-carboxylate peptidase; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase 2631401 5539532 Rcas_2052 Roseiflexus castenholzii DSM 13941 pyrrolidone-carboxylate peptidase YP_001432157.1 2630784 D 383372 CDS YP_001432158.1 156742029 5539533 complement(2633454..2634896) 1 NC_009767.1 KEGG: rrs:RoseRS_1775 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Prolyl-tRNA synthetase; prolyl-tRNA synthetase 2634896 5539533 Rcas_2053 Roseiflexus castenholzii DSM 13941 prolyl-tRNA synthetase YP_001432158.1 2633454 R 383372 CDS YP_001432159.1 156742030 5539534 complement(2634950..2635561) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3553 protein of unknown function DUF820; hypothetical protein 2635561 5539534 Rcas_2054 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432159.1 2634950 R 383372 CDS YP_001432160.1 156742031 5539535 complement(2635606..2637795) 1 NC_009767.1 PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_1099 glycosyl transferase, family 39; glycosyl transferase family protein 2637795 5539535 Rcas_2055 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001432160.1 2635606 R 383372 CDS YP_001432161.1 156742032 5539536 complement(2637866..2638648) 1 NC_009767.1 KEGG: rrs:RoseRS_1776 hypothetical protein; hypothetical protein 2638648 5539536 Rcas_2056 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432161.1 2637866 R 383372 CDS YP_001432162.1 156742033 5539537 complement(2638658..2639353) 1 NC_009767.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: rrs:RoseRS_1777 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 2639353 5539537 Rcas_2057 Roseiflexus castenholzii DSM 13941 ribulose-phosphate 3-epimerase YP_001432162.1 2638658 R 383372 CDS YP_001432163.1 156742034 5539538 2639603..2641018 1 NC_009767.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1778 major facilitator superfamily MFS_1; major facilitator transporter 2641018 5539538 Rcas_2058 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432163.1 2639603 D 383372 CDS YP_001432164.1 156742035 5539539 2641145..2641612 1 NC_009767.1 KEGG: rrs:RoseRS_1779 hypothetical protein; hypothetical protein 2641612 5539539 Rcas_2059 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432164.1 2641145 D 383372 CDS YP_001432165.1 156742036 5539540 complement(2641626..2642090) 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1780 FHA domain containing protein; FHA domain-containing protein 2642090 5539540 Rcas_2060 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432165.1 2641626 R 383372 CDS YP_001432166.1 156742037 5539541 complement(2642131..2642859) 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1781 FHA domain containing protein; FHA domain-containing protein 2642859 5539541 Rcas_2061 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432166.1 2642131 R 383372 CDS YP_001432167.1 156742038 5539542 complement(2643071..2644015) 1 NC_009767.1 KEGG: rrs:RoseRS_1782 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein 2644015 5539542 Rcas_2062 Roseiflexus castenholzii DSM 13941 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein YP_001432167.1 2643071 R 383372 CDS YP_001432168.1 156742039 5539544 complement(2647342..2648334) 1 NC_009767.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2648334 5539544 Rcas_2064 Roseiflexus castenholzii DSM 13941 dihydroorotate dehydrogenase 2 YP_001432168.1 2647342 R 383372 CDS YP_001432169.1 156742040 5539545 2648567..2649955 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; cyclic nucleotide-binding; KEGG: rrs:RoseRS_1786 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 2649955 5539545 Rcas_2065 Roseiflexus castenholzii DSM 13941 cyclic nucleotide-binding protein YP_001432169.1 2648567 D 383372 CDS YP_001432170.1 156742041 5539546 2652305..2653483 1 NC_009767.1 PFAM: peptidase M24; KEGG: rrs:RoseRS_1789 peptidase M24; peptidase M24 2653483 5539546 Rcas_2066 Roseiflexus castenholzii DSM 13941 peptidase M24 YP_001432170.1 2652305 D 383372 CDS YP_001432171.1 156742042 5539547 complement(2653459..2654313) 1 NC_009767.1 KEGG: rrs:RoseRS_1470 hypothetical protein; hypothetical protein 2654313 5539547 Rcas_2067 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432171.1 2653459 R 383372 CDS YP_001432172.1 156742043 5539548 complement(2654324..2654902) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1471 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 2654902 5539548 Rcas_2068 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001432172.1 2654324 R 383372 CDS YP_001432173.1 156742044 5539549 2655074..2655367 1 NC_009767.1 KEGG: rrs:RoseRS_1472 hypothetical protein; hypothetical protein 2655367 5539549 Rcas_2069 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432173.1 2655074 D 383372 CDS YP_001432174.1 156742045 5539550 complement(2655583..2656770) 1 NC_009767.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 2656770 pgk 5539550 pgk Roseiflexus castenholzii DSM 13941 phosphoglycerate kinase YP_001432174.1 2655583 R 383372 CDS YP_001432175.1 156742046 5539551 2656920..2657639 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_1481 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2657639 5539551 Rcas_2071 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001432175.1 2656920 D 383372 CDS YP_001432176.1 156742047 5539552 complement(2657757..2658893) 1 NC_009767.1 KEGG: rrs:RoseRS_1482 hypothetical protein; hypothetical protein 2658893 5539552 Rcas_2072 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432176.1 2657757 R 383372 CDS YP_001432177.1 156742048 5539553 2659221..2660147 1 NC_009767.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rrs:RoseRS_1483 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2660147 5539553 Rcas_2073 Roseiflexus castenholzii DSM 13941 cation diffusion facilitator family transporter YP_001432177.1 2659221 D 383372 CDS YP_001432178.1 156742049 5539554 complement(2660284..2661723) 1 NC_009767.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mva:Mvan_4388 amine oxidase; amine oxidase 2661723 5539554 Rcas_2074 Roseiflexus castenholzii DSM 13941 amine oxidase YP_001432178.1 2660284 R 383372 CDS YP_001432179.1 156742050 5539555 complement(2661814..2662782) 1 NC_009767.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_1484 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 2662782 5539555 Rcas_2075 Roseiflexus castenholzii DSM 13941 alcohol dehydrogenase YP_001432179.1 2661814 R 383372 CDS YP_001432180.1 156742051 5539556 complement(2662818..2663960) 1 NC_009767.1 KEGG: mma:MM3038 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; IS605 family transposase OrfB 2663960 5539556 Rcas_2076 Roseiflexus castenholzii DSM 13941 IS605 family transposase OrfB YP_001432180.1 2662818 R 383372 CDS YP_001432181.1 156742052 5539557 complement(2664273..2667968) 1 NC_009767.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_1485 alpha amylase, catalytic region; alpha amylase 2667968 5539557 Rcas_2077 Roseiflexus castenholzii DSM 13941 alpha amylase YP_001432181.1 2664273 R 383372 CDS YP_001432182.1 156742053 5539558 2668352..2669107 1 NC_009767.1 KEGG: rrs:RoseRS_1487 hypothetical protein; hypothetical protein 2669107 5539558 Rcas_2078 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432182.1 2668352 D 383372 CDS YP_001432183.1 156742054 5539559 2669224..2670246 1 NC_009767.1 PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_1488 rhodanese domain protein; rhodanese domain-containing protein 2670246 5539559 Rcas_2079 Roseiflexus castenholzii DSM 13941 rhodanese domain-containing protein YP_001432183.1 2669224 D 383372 CDS YP_001432184.1 156742055 5539560 2670253..2671491 1 NC_009767.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rrs:RoseRS_1489 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 2671491 5539560 Rcas_2080 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432184.1 2670253 D 383372 CDS YP_001432185.1 156742056 5539561 2671737..2672420 1 NC_009767.1 KEGG: rrs:RoseRS_2458 hypothetical protein; hypothetical protein 2672420 5539561 Rcas_2081 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432185.1 2671737 D 383372 CDS YP_001432186.1 156742057 5539562 complement(2672454..2673995) 1 NC_009767.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rrs:RoseRS_1490 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2673995 5539562 Rcas_2082 Roseiflexus castenholzii DSM 13941 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001432186.1 2672454 R 383372 CDS YP_001432187.1 156742058 5539563 complement(2674060..2675271) 1 NC_009767.1 KEGG: rrs:RoseRS_1491 hypothetical protein; hypothetical protein 2675271 5539563 Rcas_2083 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432187.1 2674060 R 383372 CDS YP_001432188.1 156742059 5539564 2675864..2676766 1 NC_009767.1 TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_1492 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2676766 5539564 Rcas_2084 Roseiflexus castenholzii DSM 13941 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001432188.1 2675864 D 383372 CDS YP_001432189.1 156742060 5539565 complement(2676800..2678290) 1 NC_009767.1 hypothetical protein 2678290 5539565 Rcas_2085 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432189.1 2676800 R 383372 CDS YP_001432190.1 156742061 5539566 complement(2678796..2679863) 1 NC_009767.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_2987 homoserine dehydrogenase; homoserine dehydrogenase 2679863 5539566 Rcas_2086 Roseiflexus castenholzii DSM 13941 homoserine dehydrogenase YP_001432190.1 2678796 R 383372 CDS YP_001432191.1 156742062 5539567 2680059..2680622 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2988 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2680622 5539567 Rcas_2087 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001432191.1 2680059 D 383372 CDS YP_001432192.1 156742063 5539568 2681114..2681470 1 NC_009767.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: rrs:RoseRS_2989 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 2681470 5539568 Rcas_2088 Roseiflexus castenholzii DSM 13941 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_001432192.1 2681114 D 383372 CDS YP_001432193.1 156742064 5539569 2681937..2682743 1 NC_009767.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2682743 5539569 Rcas_2089 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase subunit B YP_001432193.1 2681937 D 383372 CDS YP_001432194.1 156742065 5539570 2682721..2683290 1 NC_009767.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rrs:RoseRS_2991 NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase (ubiquinone) 30 kDa subunit 2683290 5539570 Rcas_2090 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_001432194.1 2682721 D 383372 CDS YP_001432195.1 156742066 5539571 2683311..2684435 1 NC_009767.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: rrs:RoseRS_2992 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2684435 5539571 Rcas_2091 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase (quinone) YP_001432195.1 2683311 D 383372 CDS YP_001432196.1 156742067 5539572 2684598..2685947 1 NC_009767.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2993 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2685947 5539572 Rcas_2092 Roseiflexus castenholzii DSM 13941 4Fe-4S ferredoxin YP_001432196.1 2684598 D 383372 CDS YP_001432197.1 156742068 5539573 2685962..2687320 1 NC_009767.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rrs:RoseRS_2994 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2687320 5539573 Rcas_2093 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase (quinone) YP_001432197.1 2685962 D 383372 CDS YP_001432198.1 156742069 5539574 2687348..2688001 1 NC_009767.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: rrs:RoseRS_2995 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 2688001 5539574 Rcas_2094 Roseiflexus castenholzii DSM 13941 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_001432198.1 2687348 D 383372 CDS YP_001432199.1 156742070 5539575 2688056..2688382 1 NC_009767.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rrs:RoseRS_2996 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 2688382 5539575 Rcas_2095 Roseiflexus castenholzii DSM 13941 NADH-ubiquinone oxidoreductase chain 4L YP_001432199.1 2688056 D 383372 CDS YP_001432200.1 156742071 5539576 2689201..2691381 1 NC_009767.1 KEGG: rrs:RoseRS_2997 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 2691381 5539576 Rcas_2096 Roseiflexus castenholzii DSM 13941 proton-translocating NADH-quinone oxidoreductase subunit L YP_001432200.1 2689201 D 383372 CDS YP_001432201.1 156742072 5539577 2691768..2693468 1 NC_009767.1 KEGG: rrs:RoseRS_2998 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 2693468 5539577 Rcas_2097 Roseiflexus castenholzii DSM 13941 proton-translocating NADH-quinone oxidoreductase subunit M YP_001432201.1 2691768 D 383372 CDS YP_001432202.1 156742073 5539578 2693476..2694993 1 NC_009767.1 KEGG: rrs:RoseRS_2999 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 2694993 5539578 Rcas_2098 Roseiflexus castenholzii DSM 13941 proton-translocating NADH-quinone oxidoreductase subunit M YP_001432202.1 2693476 D 383372 CDS YP_001432203.1 156742074 5539579 2695720..2697342 1 NC_009767.1 KEGG: rrs:RoseRS_3000 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 2697342 5539579 Rcas_2099 Roseiflexus castenholzii DSM 13941 proton-translocating NADH-quinone oxidoreductase subunit N YP_001432203.1 2695720 D 383372 CDS YP_001432204.1 156742075 5539580 2697461..2698024 1 NC_009767.1 KEGG: rrs:RoseRS_3001 hypothetical protein; hypothetical protein 2698024 5539580 Rcas_2100 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432204.1 2697461 D 383372 CDS YP_001432205.1 156742076 5539581 2698472..2700412 1 NC_009767.1 KEGG: rrs:RoseRS_3002 hypothetical protein; hypothetical protein 2700412 5539581 Rcas_2101 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432205.1 2698472 D 383372 CDS YP_001432206.1 156742077 5539583 2701415..2702209 1 NC_009767.1 PFAM: Abortive infection protein; KEGG: mth:MTH623 hypothetical protein; abortive infection protein 2702209 5539583 Rcas_2103 Roseiflexus castenholzii DSM 13941 abortive infection protein YP_001432206.1 2701415 D 383372 CDS YP_001432207.1 156742078 5539584 2702634..2704049 1 NC_009767.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3003 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 2704049 5539584 Rcas_2104 Roseiflexus castenholzii DSM 13941 dihydrolipoamide dehydrogenase YP_001432207.1 2702634 D 383372 CDS YP_001432208.1 156742079 5539585 2704068..2704433 1 NC_009767.1 KEGG: rrs:RoseRS_3004 hypothetical protein; hypothetical protein 2704433 5539585 Rcas_2105 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432208.1 2704068 D 383372 CDS YP_001432209.1 156742080 5539586 complement(2705393..2706028) 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_3005 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2706028 5539586 Rcas_2106 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001432209.1 2705393 R 383372 CDS YP_001432210.1 156742081 5539587 complement(2706219..2708639) 1 NC_009767.1 PFAM: peptidase S16 lon domain protein; KEGG: rrs:RoseRS_3006 ATP-dependent protease-like protein; peptidase S16 lon domain-containing protein 2708639 5539587 Rcas_2107 Roseiflexus castenholzii DSM 13941 peptidase S16 lon domain-containing protein YP_001432210.1 2706219 R 383372 CDS YP_001432211.1 156742082 5539588 complement(2708694..2709644) 1 NC_009767.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rrs:RoseRS_3007 agmatinase; agmatinase 2709644 5539588 Rcas_2108 Roseiflexus castenholzii DSM 13941 agmatinase YP_001432211.1 2708694 R 383372 CDS YP_001432212.1 156742083 5539589 2709889..2710446 1 NC_009767.1 KEGG: rrs:RoseRS_3051 hypothetical protein; hypothetical protein 2710446 5539589 Rcas_2109 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432212.1 2709889 D 383372 CDS YP_001432213.1 156742084 5539590 2710683..2712890 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_3050 extracellular solute-binding protein, family 5; extracellular solute-binding protein 2712890 5539590 Rcas_2110 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001432213.1 2710683 D 383372 CDS YP_001432214.1 156742085 5539591 2712985..2713971 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_3049 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2713971 5539591 Rcas_2111 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432214.1 2712985 D 383372 CDS YP_001432215.1 156742086 5539592 2713991..2715121 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_3048 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2715121 5539592 Rcas_2112 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432215.1 2713991 D 383372 CDS YP_001432216.1 156742087 5539593 2715191..2716186 1 NC_009767.1 KEGG: rrs:RoseRS_3047 hypothetical protein; hypothetical protein 2716186 5539593 Rcas_2113 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432216.1 2715191 D 383372 CDS YP_001432217.1 156742088 5539594 complement(2716338..2717852) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2591 D-ribose transport system ATP-binding protein; ABC transporter-like protein 2717852 5539594 Rcas_2114 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432217.1 2716338 R 383372 CDS YP_001432218.1 156742089 5539595 complement(2717916..2719010) 1 NC_009767.1 KEGG: mes:Meso_1605 sugar ABC transporter, periplasmic sugar-binding protein; sugar ABC transporter periplasmic sugar-binding protein 2719010 5539595 Rcas_2115 Roseiflexus castenholzii DSM 13941 sugar ABC transporter periplasmic sugar-binding protein YP_001432218.1 2717916 R 383372 CDS YP_001432219.1 156742090 5539596 complement(2719087..2720109) 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: mes:Meso_1606 inner-membrane translocator; monosaccharide-transporting ATPase 2720109 5539596 Rcas_2116 Roseiflexus castenholzii DSM 13941 monosaccharide-transporting ATPase YP_001432219.1 2719087 R 383372 CDS YP_001432220.1 156742091 5539597 complement(2720149..2721390) 1 NC_009767.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sen:SACE_3937 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 2721390 5539597 Rcas_2117 Roseiflexus castenholzii DSM 13941 mandelate racemase/muconate lactonizing protein YP_001432220.1 2720149 R 383372 CDS YP_001432221.1 156742092 5539598 complement(2721415..2722197) 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:pRL110166 cyclohexadiene dehydrogenase; short-chain dehydrogenase/reductase SDR 2722197 5539598 Rcas_2118 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001432221.1 2721415 R 383372 CDS YP_001432222.1 156742093 5539599 complement(2722187..2723335) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rxy:Rxyl_3005 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2723335 5539599 Rcas_2119 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001432222.1 2722187 R 383372 CDS YP_001432223.1 156742094 5539600 complement(2723332..2724054) 1 NC_009767.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aau:AAur_1100 transcription regulator, GntR family; GntR family transcriptional regulator 2724054 5539600 Rcas_2120 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001432223.1 2723332 R 383372 CDS YP_001432224.1 156742095 5539601 2725043..2726044 1 NC_009767.1 KEGG: rrs:RoseRS_3491 response regulator receiver and SARP domain protein; response regulator receiver/SARP domain-containing protein 2726044 5539601 Rcas_2121 Roseiflexus castenholzii DSM 13941 response regulator receiver/SARP domain-containing protein YP_001432224.1 2725043 D 383372 CDS YP_001432225.1 156742096 5539602 2726262..2726963 1 NC_009767.1 KEGG: rrs:RoseRS_3492 hypothetical protein; hypothetical protein 2726963 5539602 Rcas_2122 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432225.1 2726262 D 383372 CDS YP_001432226.1 156742097 5539603 2727034..2727315 1 NC_009767.1 PFAM: protein of unknown function DUF909; KEGG: rrs:RoseRS_3493 protein of unknown function DUF909; hypothetical protein 2727315 5539603 Rcas_2123 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432226.1 2727034 D 383372 CDS YP_001432227.1 156742098 5539604 2727349..2732088 1 NC_009767.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rrs:RoseRS_3495 cell divisionFtsK/SpoIIIE; cell division protein FtsK 2732088 5539604 Rcas_2124 Roseiflexus castenholzii DSM 13941 cell division protein FtsK YP_001432227.1 2727349 D 383372 CDS YP_001432228.1 156742099 5539605 2732085..2732933 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_3496 FHA domain containing protein; FHA domain-containing protein 2732933 5539605 Rcas_2125 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432228.1 2732085 D 383372 CDS YP_001432229.1 156742100 5539606 2732930..2734156 1 NC_009767.1 KEGG: rrs:RoseRS_3497 von Willebrand factor, type A; von Willebrand factor, type A 2734156 5539606 Rcas_2126 Roseiflexus castenholzii DSM 13941 von Willebrand factor, type A YP_001432229.1 2732930 D 383372 CDS YP_001432230.1 156742101 5539607 2734166..2735203 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3498 protein kinase; serine/threonine protein kinase 2735203 5539607 Rcas_2127 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001432230.1 2734166 D 383372 CDS YP_001432231.1 156742102 5539608 2735434..2737509 1 NC_009767.1 PFAM: PASTA domain containing protein; Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_3499 PASTA domain containing protein; Ser/Thr phosphatase 2737509 5539608 Rcas_2128 Roseiflexus castenholzii DSM 13941 Ser/Thr phosphatase YP_001432231.1 2735434 D 383372 CDS YP_001432232.1 156742103 5539609 2737629..2739041 1 NC_009767.1 KEGG: rrs:RoseRS_3500 hypothetical protein; hypothetical protein 2739041 5539609 Rcas_2129 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432232.1 2737629 D 383372 CDS YP_001432233.1 156742104 5539610 2739152..2740018 1 NC_009767.1 PFAM: CHAP domain containing protein; KEGG: rrs:RoseRS_3502 CHAP domain containing protein; CHAP domain-containing protein 2740018 5539610 Rcas_2130 Roseiflexus castenholzii DSM 13941 CHAP domain-containing protein YP_001432233.1 2739152 D 383372 CDS YP_001432234.1 156742105 5539611 2740405..2741562 1 NC_009767.1 KEGG: rrs:RoseRS_3501 hypothetical protein; hypothetical protein 2741562 5539611 Rcas_2131 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432234.1 2740405 D 383372 CDS YP_001432235.1 156742106 5539612 2741682..2742518 1 NC_009767.1 hypothetical protein 2742518 5539612 Rcas_2132 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432235.1 2741682 D 383372 CDS YP_001432236.1 156742107 5539613 2742916..2744046 1 NC_009767.1 KEGG: rrs:RoseRS_3044 hypothetical protein; hypothetical protein 2744046 5539613 Rcas_2133 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432236.1 2742916 D 383372 CDS YP_001432237.1 156742108 5539614 2744052..2744921 1 NC_009767.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rrs:RoseRS_3043 D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase 2744921 5539614 Rcas_2134 Roseiflexus castenholzii DSM 13941 D12 class N6 adenine-specific DNA methyltransferase YP_001432237.1 2744052 D 383372 CDS YP_001432238.1 156742109 5539615 complement(2745006..2746343) 1 NC_009767.1 KEGG: rrs:RoseRS_3039 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 2746343 5539615 Rcas_2135 Roseiflexus castenholzii DSM 13941 carboxyl-terminal protease YP_001432238.1 2745006 R 383372 CDS YP_001432239.1 156742110 5539616 complement(2746787..2747560) 1 NC_009767.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2747560 5539616 Rcas_2136 Roseiflexus castenholzii DSM 13941 16S ribosomal RNA methyltransferase RsmE YP_001432239.1 2746787 R 383372 CDS YP_001432240.1 156742111 5539617 complement(2747564..2748577) 1 NC_009767.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: rrs:RoseRS_3037 ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 2748577 5539617 Rcas_2137 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L11 methyltransferase YP_001432240.1 2747564 R 383372 CDS YP_001432241.1 156742112 5539618 complement(2748547..2749983) 1 NC_009767.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2749983 cysS 5539618 cysS Roseiflexus castenholzii DSM 13941 cysteinyl-tRNA synthetase YP_001432241.1 2748547 R 383372 CDS YP_001432242.1 156742113 5539619 complement(2749989..2750768) 1 NC_009767.1 TIGRFAM: serine O-acetyltransferase; KEGG: rrs:RoseRS_3035 serine O-acetyltransferase; serine O-acetyltransferase 2750768 5539619 Rcas_2139 Roseiflexus castenholzii DSM 13941 serine O-acetyltransferase YP_001432242.1 2749989 R 383372 CDS YP_001432243.1 156742114 5539620 complement(2750948..2751247) 1 NC_009767.1 TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: rrs:RoseRS_3034 regulatory protein, FmdB family; FmdB family regulatory protein 2751247 5539620 Rcas_2140 Roseiflexus castenholzii DSM 13941 FmdB family regulatory protein YP_001432243.1 2750948 R 383372 CDS YP_001432244.1 156742115 5539621 complement(2751333..2752553) 1 NC_009767.1 PFAM: protein of unknown function DUF1006; KEGG: rrs:RoseRS_3033 protein of unknown function DUF1006; hypothetical protein 2752553 5539621 Rcas_2141 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432244.1 2751333 R 383372 CDS YP_001432245.1 156742116 5539622 2752643..2753110 1 NC_009767.1 KEGG: rrs:RoseRS_3032 hypothetical protein; hypothetical protein 2753110 5539622 Rcas_2142 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432245.1 2752643 D 383372 CDS YP_001432246.1 156742117 5539623 complement(2753123..2753755) 1 NC_009767.1 KEGG: rrs:RoseRS_3031 hypothetical protein; hypothetical protein 2753755 5539623 Rcas_2143 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432246.1 2753123 R 383372 CDS YP_001432247.1 156742118 5539624 complement(2753978..2754616) 1 NC_009767.1 PFAM: peptidase M23B; KEGG: rrs:RoseRS_3030 peptidase M23B; peptidase M23B 2754616 5539624 Rcas_2144 Roseiflexus castenholzii DSM 13941 peptidase M23B YP_001432247.1 2753978 R 383372 CDS YP_001432248.1 156742119 5539625 complement(2754592..2755584) 1 NC_009767.1 KEGG: rrs:RoseRS_3029 hypothetical protein; hypothetical protein 2755584 5539625 Rcas_2145 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432248.1 2754592 R 383372 CDS YP_001432249.1 156742120 5539626 complement(2755581..2756108) 1 NC_009767.1 KEGG: rrs:RoseRS_3028 hypothetical protein; hypothetical protein 2756108 5539626 Rcas_2146 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432249.1 2755581 R 383372 CDS YP_001432250.1 156742121 5539627 complement(2756240..2757169) 1 NC_009767.1 PFAM: initiation factor 2B related; KEGG: rrs:RoseRS_3027 initiation factor 2B related; initiation factor 2B-like protein 2757169 5539627 Rcas_2147 Roseiflexus castenholzii DSM 13941 initiation factor 2B-like protein YP_001432250.1 2756240 R 383372 CDS YP_001432251.1 156742122 5539628 complement(2757315..2759774) 1 NC_009767.1 KEGG: rrs:RoseRS_3026 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 2759774 5539628 Rcas_2148 Roseiflexus castenholzii DSM 13941 multi-sensor hybrid histidine kinase YP_001432251.1 2757315 R 383372 CDS YP_001432252.1 156742123 5539629 2759985..2761223 1 NC_009767.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_3025 2-alkenal reductase; 2-alkenal reductase 2761223 5539629 Rcas_2149 Roseiflexus castenholzii DSM 13941 2-alkenal reductase YP_001432252.1 2759985 D 383372 CDS YP_001432253.1 156742124 5539631 complement(2761604..2762695) 1 NC_009767.1 KEGG: rrs:RoseRS_3024 hypothetical protein; hypothetical protein 2762695 5539631 Rcas_2151 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432253.1 2761604 R 383372 CDS YP_001432254.1 156742125 5539632 2762850..2764391 1 NC_009767.1 KEGG: rrs:RoseRS_3023 hypothetical protein; hypothetical protein 2764391 5539632 Rcas_2152 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432254.1 2762850 D 383372 CDS YP_001432255.1 156742126 5539633 complement(2764760..2765782) 1 NC_009767.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2765782 trpD 5539633 trpD Roseiflexus castenholzii DSM 13941 anthranilate phosphoribosyltransferase YP_001432255.1 2764760 R 383372 CDS YP_001432256.1 156742127 5539634 complement(2765769..2767196) 1 NC_009767.1 PFAM: protein of unknown function DUF407; KEGG: rrs:RoseRS_1453 hypothetical protein; hypothetical protein 2767196 5539634 Rcas_2154 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432256.1 2765769 R 383372 CDS YP_001432257.1 156742128 5539635 complement(2767199..2767765) 1 NC_009767.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: rrs:RoseRS_1454 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 2767765 5539635 Rcas_2155 Roseiflexus castenholzii DSM 13941 glutamine amidotransferase of anthranilate synthase YP_001432257.1 2767199 R 383372 CDS YP_001432258.1 156742129 5539636 complement(2767762..2769315) 1 NC_009767.1 KEGG: rrs:RoseRS_1455 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; anthranilate synthase component I 2769315 5539636 Rcas_2156 Roseiflexus castenholzii DSM 13941 anthranilate synthase component I YP_001432258.1 2767762 R 383372 CDS YP_001432259.1 156742130 5539637 complement(2770716..2771723) 1 NC_009767.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2771723 5539637 Rcas_2157 Roseiflexus castenholzii DSM 13941 tryptophanyl-tRNA synthetase YP_001432259.1 2770716 R 383372 CDS YP_001432260.1 156742131 5539638 2771944..2773869 1 NC_009767.1 KEGG: rrs:RoseRS_1457 hypothetical protein; hypothetical protein 2773869 5539638 Rcas_2158 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432260.1 2771944 D 383372 CDS YP_001432261.1 156742132 5539639 complement(2774087..2775445) 1 NC_009767.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 2775445 5539639 Rcas_2159 Roseiflexus castenholzii DSM 13941 tryptophan synthase subunit beta YP_001432261.1 2774087 R 383372 CDS YP_001432262.1 156742133 5539640 complement(2776440..2776685) 1 NC_009767.1 KEGG: rrs:RoseRS_1461 hypothetical protein; hypothetical protein 2776685 5539640 Rcas_2160 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432262.1 2776440 R 383372 CDS YP_001432263.1 156742134 5539641 complement(2776698..2777219) 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1462 FHA domain containing protein; FHA domain-containing protein 2777219 5539641 Rcas_2161 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432263.1 2776698 R 383372 CDS YP_001432264.1 156742135 5539642 complement(2777336..2778613) 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1463 von Willebrand factor, type A; von Willebrand factor A 2778613 5539642 Rcas_2162 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001432264.1 2777336 R 383372 CDS YP_001432265.1 156742136 5539643 complement(2778765..2779778) 1 NC_009767.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_1464 protein phosphatase 2C domain protein; Ser/Thr phosphatase 2779778 5539643 Rcas_2163 Roseiflexus castenholzii DSM 13941 Ser/Thr phosphatase YP_001432265.1 2778765 R 383372 CDS YP_001432266.1 156742137 5539644 complement(2779812..2781770) 1 NC_009767.1 PFAM: protein kinase; Pyrrolo-quinoline quinone; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1465 protein kinase; serine/threonine protein kinase 2781770 5539644 Rcas_2164 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001432266.1 2779812 R 383372 CDS YP_001432267.1 156742138 5539645 2782173..2782808 1 NC_009767.1 KEGG: rrs:RoseRS_1466 hypothetical protein; hypothetical protein 2782808 5539645 Rcas_2165 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432267.1 2782173 D 383372 CDS YP_001432268.1 156742139 5539646 complement(2782816..2783976) 1 NC_009767.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_1467 radical SAM domain protein; radical SAM domain-containing protein 2783976 5539646 Rcas_2166 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001432268.1 2782816 R 383372 CDS YP_001432269.1 156742140 5539647 complement(2784194..2784568) 1 NC_009767.1 hypothetical protein 2784568 5539647 Rcas_2167 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432269.1 2784194 R 383372 CDS YP_001432270.1 156742141 5539649 2785088..2786113 1 NC_009767.1 KEGG: rrs:RoseRS_1468 transcriptional regulator-like protein; transcriptional regulator-like protein 2786113 5539649 Rcas_2168 Roseiflexus castenholzii DSM 13941 transcriptional regulator-like protein YP_001432270.1 2785088 D 383372 CDS YP_001432271.1 156742142 5539650 complement(2786163..2788628) 1 NC_009767.1 KEGG: rrs:RoseRS_1469 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 2788628 5539650 Rcas_2169 Roseiflexus castenholzii DSM 13941 ATP-dependent protease La YP_001432271.1 2786163 R 383372 CDS YP_001432272.1 156742143 5539651 complement(2788758..2790788) 1 NC_009767.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: rrs:RoseRS_1790 amylo-alpha-1,6-glucosidase; amylo-alpha-1,6-glucosidase 2790788 5539651 Rcas_2170 Roseiflexus castenholzii DSM 13941 amylo-alpha-1,6-glucosidase YP_001432272.1 2788758 R 383372 CDS YP_001432273.1 156742144 5539652 complement(2791078..2791605) 1 NC_009767.1 KEGG: rrs:RoseRS_1791 transcriptional regulator, LysR family; LysR family transcriptional regulator 2791605 5539652 Rcas_2171 Roseiflexus castenholzii DSM 13941 LysR family transcriptional regulator YP_001432273.1 2791078 R 383372 CDS YP_001432274.1 156742145 5539653 2791744..2793441 1 NC_009767.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Polysulphide reductase NrfD; KEGG: rrs:RoseRS_1792 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cyclic nucleotide-binding protein 2793441 5539653 Rcas_2172 Roseiflexus castenholzii DSM 13941 cyclic nucleotide-binding protein YP_001432274.1 2791744 D 383372 CDS YP_001432275.1 156742146 5539654 2793460..2796510 1 NC_009767.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_1793 formate dehydrogenase; nitrate reductase 2796510 5539654 Rcas_2173 Roseiflexus castenholzii DSM 13941 nitrate reductase YP_001432275.1 2793460 D 383372 CDS YP_001432276.1 156742147 5539655 2796513..2797562 1 NC_009767.1 KEGG: rrs:RoseRS_1794 uncharacterized component of anaerobic dehydrogenase-like protein; anaerobic dehydrogenase-like protein 2797562 5539655 Rcas_2174 Roseiflexus castenholzii DSM 13941 anaerobic dehydrogenase-like protein YP_001432276.1 2796513 D 383372 CDS YP_001432277.1 156742148 5539656 2797604..2798296 1 NC_009767.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: rrs:RoseRS_1795 formylmethanofuran dehydrogenase, subunit E region; formylmethanofuran dehydrogenase subunit E 2798296 5539656 Rcas_2175 Roseiflexus castenholzii DSM 13941 formylmethanofuran dehydrogenase subunit E YP_001432277.1 2797604 D 383372 CDS YP_001432278.1 156742149 5539657 complement(2798191..2799387) 1 NC_009767.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1796 ABC transporter related; ABC transporter-like protein 2799387 5539657 Rcas_2176 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432278.1 2798191 R 383372 CDS YP_001432279.1 156742150 5539658 complement(2799384..2800064) 1 NC_009767.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1797 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit 2800064 5539658 Rcas_2177 Roseiflexus castenholzii DSM 13941 molybdate ABC transporter inner membrane subunit YP_001432279.1 2799384 R 383372 CDS YP_001432280.1 156742151 5539659 complement(2800061..2800867) 1 NC_009767.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_1798 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 2800867 5539659 Rcas_2178 Roseiflexus castenholzii DSM 13941 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001432280.1 2800061 R 383372 CDS YP_001432281.1 156742152 5539660 complement(2801216..2801776) 1 NC_009767.1 PFAM: transcriptional regulator PadR family protein; KEGG: sma:SAV6305 PadR-family transcriptional regulator; PadR-like family transcriptional regulator 2801776 5539660 Rcas_2179 Roseiflexus castenholzii DSM 13941 PadR-like family transcriptional regulator YP_001432281.1 2801216 R 383372 CDS YP_001432282.1 156742153 5539661 complement(2801850..2803163) 1 NC_009767.1 KEGG: rrs:RoseRS_1799 hypothetical protein; hypothetical protein 2803163 5539661 Rcas_2180 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432282.1 2801850 R 383372 CDS YP_001432283.1 156742154 5539662 complement(2803500..2804174) 1 NC_009767.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1800 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 2804174 5539662 Rcas_2181 Roseiflexus castenholzii DSM 13941 polar amino acid ABC transporter inner membrane subunit YP_001432283.1 2803500 R 383372 CDS YP_001432284.1 156742155 5539663 complement(2804191..2804928) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1801 ABC transporter related; ABC transporter-like protein 2804928 5539663 Rcas_2182 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432284.1 2804191 R 383372 CDS YP_001432285.1 156742156 5539664 complement(2804960..2805613) 1 NC_009767.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1802 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 2805613 5539664 Rcas_2183 Roseiflexus castenholzii DSM 13941 polar amino acid ABC transporter inner membrane subunit YP_001432285.1 2804960 R 383372 CDS YP_001432286.1 156742157 5539665 complement(2805618..2806505) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 3; KEGG: rrs:RoseRS_1803 extracellular solute-binding protein, family 3; extracellular solute-binding protein 2806505 5539665 Rcas_2184 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001432286.1 2805618 R 383372 CDS YP_001432287.1 156742158 5539667 complement(2807631..2808965) 1 NC_009767.1 KEGG: rrs:RoseRS_1804 hypothetical protein; hypothetical protein 2808965 5539667 Rcas_2186 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432287.1 2807631 R 383372 CDS YP_001432288.1 156742159 5539668 complement(2809167..2810570) 1 NC_009767.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_1074 peptidase M20; peptidase M20 2810570 5539668 Rcas_2187 Roseiflexus castenholzii DSM 13941 peptidase M20 YP_001432288.1 2809167 R 383372 CDS YP_001432289.1 156742160 5539669 complement(2810582..2813125) 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KR domain protein; KEGG: rrs:RoseRS_1073 thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate protein central region 2813125 5539669 Rcas_2188 Roseiflexus castenholzii DSM 13941 thiamine pyrophosphate protein central region YP_001432289.1 2810582 R 383372 CDS YP_001432290.1 156742161 5539670 complement(2813143..2814384) 1 NC_009767.1 KEGG: sat:SYN_01507 ATPase; ATPase 2814384 5539670 Rcas_2189 Roseiflexus castenholzii DSM 13941 ATPase YP_001432290.1 2813143 R 383372 CDS YP_001432291.1 156742162 5539671 complement(2814450..2815874) 1 NC_009767.1 PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: rrs:RoseRS_1072 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 2815874 5539671 Rcas_2190 Roseiflexus castenholzii DSM 13941 pyridoxal-dependent decarboxylase YP_001432291.1 2814450 R 383372 CDS YP_001432292.1 156742163 5539672 complement(2815871..2817208) 1 NC_009767.1 KEGG: rrs:RoseRS_1071 Na+/melibiose symporter and related transporter-like protein; Na+/melibiose symporter and related transporter-like protein 2817208 5539672 Rcas_2191 Roseiflexus castenholzii DSM 13941 Na+/melibiose symporter and related transporter-like protein YP_001432292.1 2815871 R 383372 CDS YP_001432293.1 156742164 5539673 complement(2817246..2817923) 1 NC_009767.1 PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_1070 transcriptional regulator, TetR family; TetR family transcriptional regulator 2817923 5539673 Rcas_2192 Roseiflexus castenholzii DSM 13941 TetR family transcriptional regulator YP_001432293.1 2817246 R 383372 CDS YP_001432294.1 156742165 5539674 2818490..2819224 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1069 protein of unknown function DUF820; hypothetical protein 2819224 5539674 Rcas_2193 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432294.1 2818490 D 383372 CDS YP_001432295.1 156742166 5539675 2819246..2820022 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1069 protein of unknown function DUF820; hypothetical protein 2820022 5539675 Rcas_2194 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432295.1 2819246 D 383372 CDS YP_001432296.1 156742167 5539676 2820044..2820736 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1069 protein of unknown function DUF820; hypothetical protein 2820736 5539676 Rcas_2195 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432296.1 2820044 D 383372 CDS YP_001432297.1 156742168 5539677 2820758..2821411 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1069 protein of unknown function DUF820; hypothetical protein 2821411 5539677 Rcas_2196 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432297.1 2820758 D 383372 CDS YP_001432298.1 156742169 5539678 complement(2821552..2837163) 1 NC_009767.1 TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Cna B domain protein; KEGG: rrs:RoseRS_1068 conserved repeat domain; hypothetical protein 2837163 5539678 Rcas_2197 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432298.1 2821552 R 383372 CDS YP_001432299.1 156742170 5539679 complement(2840286..2841044) 1 NC_009767.1 PFAM: dienelactone hydrolase; KEGG: rrs:RoseRS_2684 dienelactone hydrolase; dienelactone hydrolase 2841044 5539679 Rcas_2198 Roseiflexus castenholzii DSM 13941 dienelactone hydrolase YP_001432299.1 2840286 R 383372 CDS YP_001432300.1 156742171 5539680 2841246..2841989 1 NC_009767.1 PFAM: YhhN family protein; KEGG: rrs:RoseRS_2683 YhhN family protein; YhhN family protein 2841989 5539680 Rcas_2199 Roseiflexus castenholzii DSM 13941 YhhN family protein YP_001432300.1 2841246 D 383372 CDS YP_001432301.1 156742172 5539681 complement(2841907..2842773) 1 NC_009767.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: aau:AAur_0524 sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein 2842773 5539681 Rcas_2200 Roseiflexus castenholzii DSM 13941 xylose isomerase domain-containing protein YP_001432301.1 2841907 R 383372 CDS YP_001432302.1 156742173 5539682 complement(2842770..2843546) 1 NC_009767.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_2682 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 2843546 5539682 Rcas_2201 Roseiflexus castenholzii DSM 13941 xylose isomerase domain-containing protein YP_001432302.1 2842770 R 383372 CDS YP_001432303.1 156742174 5539683 complement(2843575..2844645) 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_2681 oxidoreductase domain protein; oxidoreductase domain-containing protein 2844645 5539683 Rcas_2202 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432303.1 2843575 R 383372 CDS YP_001432304.1 156742175 5539684 complement(2844642..2845769) 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2680 oxidoreductase domain protein; oxidoreductase domain-containing protein 2845769 5539684 Rcas_2203 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432304.1 2844642 R 383372 CDS YP_001432305.1 156742176 5539685 complement(2845959..2848037) 1 NC_009767.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2848037 nadE 5539685 nadE Roseiflexus castenholzii DSM 13941 NAD synthetase YP_001432305.1 2845959 R 383372 CDS YP_001432306.1 156742177 5539686 complement(2848099..2848425) 1 NC_009767.1 KEGG: rrs:RoseRS_2640 protein of unknown function DUF820; hypothetical protein 2848425 5539686 Rcas_2205 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432306.1 2848099 R 383372 CDS YP_001432307.1 156742178 5539687 complement(2848949..2849431) 1 NC_009767.1 KEGG: rrs:RoseRS_2640 protein of unknown function DUF820; hypothetical protein 2849431 5539687 Rcas_2206 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432307.1 2848949 R 383372 CDS YP_001432308.1 156742179 5539688 2849491..2850420 1 NC_009767.1 PFAM: pseudouridine synthase; KEGG: rrs:RoseRS_2639 pseudouridine synthase; pseudouridine synthase 2850420 5539688 Rcas_2207 Roseiflexus castenholzii DSM 13941 pseudouridine synthase YP_001432308.1 2849491 D 383372 CDS YP_001432309.1 156742180 5539689 complement(2850458..2851786) 1 NC_009767.1 PFAM: beta-lactamase; KEGG: rrs:RoseRS_2638 beta-lactamase; serine-type D-Ala-D-Ala carboxypeptidase 2851786 5539689 Rcas_2208 Roseiflexus castenholzii DSM 13941 serine-type D-Ala-D-Ala carboxypeptidase YP_001432309.1 2850458 R 383372 CDS YP_001432310.1 156742181 5539690 complement(2852690..2853955) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2637 glycosyl transferase, group 1; group 1 glycosyl transferase 2853955 5539690 Rcas_2209 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432310.1 2852690 R 383372 CDS YP_001432311.1 156742182 5539691 complement(2854927..2855313) 1 NC_009767.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: ana:alr9029 death on curing protein; death-on-curing family protein 2855313 5539691 Rcas_2210 Roseiflexus castenholzii DSM 13941 death-on-curing family protein YP_001432311.1 2854927 R 383372 CDS YP_001432312.1 156742183 5539692 complement(2855313..2855510) 1 NC_009767.1 KEGG: ana:asr9028 unknown protein; hypothetical protein 2855510 5539692 Rcas_2211 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432312.1 2855313 R 383372 CDS YP_001432313.1 156742184 5539693 complement(2856395..2857375) 1 NC_009767.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_2636 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 2857375 5539693 Rcas_2212 Roseiflexus castenholzii DSM 13941 alcohol dehydrogenase YP_001432313.1 2856395 R 383372 CDS YP_001432314.1 156742185 5539694 2858349..2859452 1 NC_009767.1 PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_2430 radical SAM domain protein; radical SAM domain-containing protein 2859452 5539694 Rcas_2213 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001432314.1 2858349 D 383372 CDS YP_001432315.1 156742186 5539695 complement(2859929..2861113) 1 NC_009767.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: rrs:RoseRS_2436 DNA replication and repair protein RecF; DNA replication and repair protein RecF 2861113 5539695 Rcas_2214 Roseiflexus castenholzii DSM 13941 DNA replication and repair protein RecF YP_001432315.1 2859929 R 383372 CDS YP_001432316.1 156742187 5539696 complement(2861140..2862177) 1 NC_009767.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 2862177 5539696 Rcas_2215 Roseiflexus castenholzii DSM 13941 isopentenyl pyrophosphate isomerase YP_001432316.1 2861140 R 383372 CDS YP_001432317.1 156742188 5539697 2862709..2863473 1 NC_009767.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rrs:RoseRS_2438 peptidylprolyl isomerase; peptidyl-prolyl isomerase 2863473 5539697 Rcas_2216 Roseiflexus castenholzii DSM 13941 peptidyl-prolyl isomerase YP_001432317.1 2862709 D 383372 CDS YP_001432318.1 156742189 5539698 complement(2863973..2866003) 1 NC_009767.1 KEGG: rrs:RoseRS_2439 hypothetical protein; hypothetical protein 2866003 5539698 Rcas_2217 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432318.1 2863973 R 383372 CDS YP_001432319.1 156742190 5539699 complement(2866024..2866671) 1 NC_009767.1 KEGG: rrs:RoseRS_2440 hypothetical protein; hypothetical protein 2866671 5539699 Rcas_2218 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432319.1 2866024 R 383372 CDS YP_001432320.1 156742191 5539700 complement(2866668..2869655) 1 NC_009767.1 KEGG: rrs:RoseRS_2441 hypothetical protein; FHA domain-containing protein 2869655 5539700 Rcas_2219 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432320.1 2866668 R 383372 CDS YP_001432321.1 156742192 5539701 complement(2869713..2870384) 1 NC_009767.1 KEGG: rrs:RoseRS_2442 hypothetical protein; hypothetical protein 2870384 5539701 Rcas_2220 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432321.1 2869713 R 383372 CDS YP_001432322.1 156742193 5539702 complement(2870550..2871314) 1 NC_009767.1 KEGG: rrs:RoseRS_2443 hypothetical protein; hypothetical protein 2871314 5539702 Rcas_2221 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432322.1 2870550 R 383372 CDS YP_001432323.1 156742194 5539703 complement(2871390..2871632) 1 NC_009767.1 KEGG: rrs:RoseRS_2444 hypothetical protein; hypothetical protein 2871632 5539703 Rcas_2222 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432323.1 2871390 R 383372 CDS YP_001432324.1 156742195 5539704 complement(2871629..2872102) 1 NC_009767.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 2872102 5539704 Rcas_2223 Roseiflexus castenholzii DSM 13941 D-tyrosyl-tRNA(Tyr) deacylase YP_001432324.1 2871629 R 383372 CDS YP_001432325.1 156742196 5539705 complement(2872099..2872527) 1 NC_009767.1 PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_2446 thioesterase superfamily protein; thioesterase superfamily protein 2872527 5539705 Rcas_2224 Roseiflexus castenholzii DSM 13941 thioesterase superfamily protein YP_001432325.1 2872099 R 383372 CDS YP_001432326.1 156742197 5539706 complement(2872558..2873064) 1 NC_009767.1 KEGG: cph:Cpha266_1502 type II site-specific deoxyribonuclease; hypothetical protein 2873064 5539706 Rcas_2225 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432326.1 2872558 R 383372 CDS YP_001432327.1 156742198 5539707 complement(2873088..2875601) 1 NC_009767.1 KEGG: pmm:PMM0384 possible uncharacterized restriction enzyme, interrupted-C; restriction enzyme 2875601 5539707 Rcas_2226 Roseiflexus castenholzii DSM 13941 restriction enzyme YP_001432327.1 2873088 R 383372 CDS YP_001432328.1 156742199 5539708 complement(2875929..2876252) 1 NC_009767.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: cph:Cpha266_2317 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 2876252 5539708 Rcas_2227 Roseiflexus castenholzii DSM 13941 excinuclease ABC subunit C YP_001432328.1 2875929 R 383372 CDS YP_001432329.1 156742200 5539709 complement(2876810..2878390) 1 NC_009767.1 PFAM: Eco57I restriction endonuclease; KEGG: ajs:Ajs_0197 Eco57I restriction endonuclease; adenine-specific DNA methyltransferase 2878390 5539709 Rcas_2228 Roseiflexus castenholzii DSM 13941 adenine-specific DNA methyltransferase YP_001432329.1 2876810 R 383372 CDS YP_001432330.1 156742201 5539710 complement(2878365..2879030) 1 NC_009767.1 KEGG: cte:CT1159 type III restriction system methylase; type III restriction system methylase 2879030 5539710 Rcas_2229 Roseiflexus castenholzii DSM 13941 type III restriction system methylase YP_001432330.1 2878365 R 383372 CDS YP_001432331.1 156742202 5539711 complement(2879043..2879306) 1 NC_009767.1 hypothetical protein 2879306 5539711 Rcas_2230 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432331.1 2879043 R 383372 CDS YP_001432332.1 156742203 5539712 complement(2879315..2880424) 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sil:SPO3451 modification methylase; DNA methylase N-4/N-6 domain-containing protein 2880424 5539712 Rcas_2231 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001432332.1 2879315 R 383372 CDS YP_001432333.1 156742204 5539713 complement(2880538..2881158) 1 NC_009767.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sen:SACE_4996 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2881158 5539713 Rcas_2232 Roseiflexus castenholzii DSM 13941 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001432333.1 2880538 R 383372 CDS YP_001432334.1 156742205 5539714 complement(2881205..2881765) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: probable aminoglycoside 2-N-acetyltransferase; N-acetyltransferase GCN5 2881765 5539714 Rcas_2233 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001432334.1 2881205 R 383372 CDS YP_001432335.1 156742206 5539715 complement(2881829..2882752) 1 NC_009767.1 PFAM: peptidase M23B; KEGG: saj:SaurJH9_2233 peptidase M23B; peptidase M23B 2882752 5539715 Rcas_2234 Roseiflexus castenholzii DSM 13941 peptidase M23B YP_001432335.1 2881829 R 383372 CDS YP_001432336.1 156742207 5539716 complement(2882941..2883402) 1 NC_009767.1 KEGG: dps:DP2348 hypothetical protein; hypothetical protein 2883402 5539716 Rcas_2235 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432336.1 2882941 R 383372 CDS YP_001432337.1 156742208 5539717 complement(2883548..2884492) 1 NC_009767.1 KEGG: hhe:HH0238 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 2884492 5539717 Rcas_2236 Roseiflexus castenholzii DSM 13941 DNA adenine methylase YP_001432337.1 2883548 R 383372 CDS YP_001432338.1 156742209 5539718 complement(2884591..2885271) 1 NC_009767.1 PFAM: Restriction endonuclease EcoRV; KEGG: hhe:HH0239 type II restriction endonuclease; restriction endonuclease EcoRV 2885271 5539718 Rcas_2237 Roseiflexus castenholzii DSM 13941 restriction endonuclease EcoRV YP_001432338.1 2884591 R 383372 CDS YP_001432339.1 156742210 5539719 complement(2885625..2885981) 1 NC_009767.1 hypothetical protein 2885981 5539719 Rcas_2238 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432339.1 2885625 R 383372 CDS YP_001432340.1 156742211 5539720 2886047..2888383 1 NC_009767.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rrs:RoseRS_2447 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 2888383 5539720 Rcas_2239 Roseiflexus castenholzii DSM 13941 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001432340.1 2886047 D 383372 CDS YP_001432341.1 156742212 5539721 2888448..2889062 1 NC_009767.1 PFAM: SH3 type 3 domain protein; KEGG: rrs:RoseRS_2448 SH3, type 3 domain protein; SH3 type 3 domain-containing protein 2889062 5539721 Rcas_2240 Roseiflexus castenholzii DSM 13941 SH3 type 3 domain-containing protein YP_001432341.1 2888448 D 383372 CDS YP_001432342.1 156742213 5539722 2889069..2890274 1 NC_009767.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rrs:RoseRS_2449 chromate transporter, chromate ion transporter (CHR) family; chromate transporter 2890274 5539722 Rcas_2241 Roseiflexus castenholzii DSM 13941 chromate transporter YP_001432342.1 2889069 D 383372 CDS YP_001432343.1 156742214 5539723 2890287..2892539 1 NC_009767.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_2450 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 2892539 5539723 Rcas_2242 Roseiflexus castenholzii DSM 13941 heavy metal translocating P-type ATPase YP_001432343.1 2890287 D 383372 CDS YP_001432344.1 156742215 5539724 2892799..2894190 1 NC_009767.1 PFAM: Amidase; KEGG: rrs:RoseRS_3083 amidase; amidase 2894190 5539724 Rcas_2243 Roseiflexus castenholzii DSM 13941 amidase YP_001432344.1 2892799 D 383372 CDS YP_001432345.1 156742216 5539725 2894194..2895075 1 NC_009767.1 PFAM: protein of unknown function DUF72; KEGG: rrs:RoseRS_3084 protein of unknown function DUF72; hypothetical protein 2895075 5539725 Rcas_2244 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432345.1 2894194 D 383372 CDS YP_001432346.1 156742217 5539726 complement(2895570..2895908) 1 NC_009767.1 hypothetical protein 2895908 5539726 Rcas_2245 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432346.1 2895570 R 383372 CDS YP_001432347.1 156742218 5539727 2896113..2897888 1 NC_009767.1 KEGG: aav:Aave_2156 polymorphic outer membrane protein; hypothetical protein 2897888 5539727 Rcas_2246 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432347.1 2896113 D 383372 CDS YP_001432348.1 156742219 5539728 2898314..2898526 1 NC_009767.1 KEGG: rrs:RoseRS_3085 hypothetical protein; hypothetical protein 2898526 5539728 Rcas_2247 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432348.1 2898314 D 383372 CDS YP_001432349.1 156742220 5539729 2898648..2899952 1 NC_009767.1 PFAM: periplasmic binding protein; KEGG: rrs:RoseRS_3086 periplasmic binding protein; periplasmic binding protein 2899952 5539729 Rcas_2248 Roseiflexus castenholzii DSM 13941 periplasmic binding protein YP_001432349.1 2898648 D 383372 CDS YP_001432350.1 156742221 5539730 2899967..2900305 1 NC_009767.1 KEGG: rrs:RoseRS_3087 ferredoxin-like protein; ferredoxin-like protein 2900305 5539730 Rcas_2249 Roseiflexus castenholzii DSM 13941 ferredoxin-like protein YP_001432350.1 2899967 D 383372 CDS YP_001432351.1 156742222 5539731 2900342..2901466 1 NC_009767.1 PFAM: transport system permease; KEGG: rrs:RoseRS_3088 transport system permease; transport system permease 2901466 5539731 Rcas_2250 Roseiflexus castenholzii DSM 13941 transport system permease YP_001432351.1 2900342 D 383372 CDS YP_001432352.1 156742223 5539732 2901463..2902491 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3089 ABC transporter related; ABC transporter-like protein 2902491 5539732 Rcas_2251 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432352.1 2901463 D 383372 CDS YP_001432353.1 156742224 5539733 2902643..2903218 1 NC_009767.1 KEGG: rrs:RoseRS_3090 hypothetical protein; hypothetical protein 2903218 5539733 Rcas_2252 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432353.1 2902643 D 383372 CDS YP_001432354.1 156742225 5539734 2903805..2905361 1 NC_009767.1 PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; KEGG: rrs:RoseRS_1638 adenylate/guanylate cyclase; adenylate cyclase 2905361 5539734 Rcas_2253 Roseiflexus castenholzii DSM 13941 adenylate cyclase YP_001432354.1 2903805 D 383372 CDS YP_001432355.1 156742226 5539735 2905400..2906620 1 NC_009767.1 PFAM: PSP1 domain protein; KEGG: rrs:RoseRS_1637 PSP1 domain protein; PSP1 domain-containing protein 2906620 5539735 Rcas_2254 Roseiflexus castenholzii DSM 13941 PSP1 domain-containing protein YP_001432355.1 2905400 D 383372 CDS YP_001432356.1 156742227 5539736 2906638..2907687 1 NC_009767.1 PFAM: oxidoreductase domain protein; KEGG: rrs:RoseRS_1636 oxidoreductase domain protein; oxidoreductase domain-containing protein 2907687 5539736 Rcas_2255 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432356.1 2906638 D 383372 CDS YP_001432357.1 156742228 5539737 2907691..2908563 1 NC_009767.1 PFAM: protein of unknown function DUF344; KEGG: rrs:RoseRS_1635 protein of unknown function DUF344; hypothetical protein 2908563 5539737 Rcas_2256 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432357.1 2907691 D 383372 CDS YP_001432358.1 156742229 5539738 2908560..2909375 1 NC_009767.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rrs:RoseRS_1634 maf protein; maf protein 2909375 5539738 Rcas_2257 Roseiflexus castenholzii DSM 13941 maf protein YP_001432358.1 2908560 D 383372 CDS YP_001432359.1 156742230 5539739 2909354..2910118 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: rrs:RoseRS_1633 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2910118 5539739 Rcas_2258 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001432359.1 2909354 D 383372 CDS YP_001432360.1 156742231 5539740 2910111..2911205 1 NC_009767.1 PFAM: diacylglycerol kinase catalytic region; KEGG: rrs:RoseRS_1632 diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 2911205 5539740 Rcas_2259 Roseiflexus castenholzii DSM 13941 diacylglycerol kinase catalytic subunit YP_001432360.1 2910111 D 383372 CDS YP_001432361.1 156742232 5539741 2911208..2912254 1 NC_009767.1 PFAM: WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_1631 WD40 domain protein beta propeller; WD40 domain-containing protein 2912254 5539741 Rcas_2260 Roseiflexus castenholzii DSM 13941 WD40 domain-containing protein YP_001432361.1 2911208 D 383372 CDS YP_001432362.1 156742233 5539742 2912254..2913546 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1630 glycosyl transferase, group 1; group 1 glycosyl transferase 2913546 5539742 Rcas_2261 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432362.1 2912254 D 383372 CDS YP_001432363.1 156742234 5539743 2913976..2914578 1 NC_009767.1 hypothetical protein 2914578 5539743 Rcas_2262 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432363.1 2913976 D 383372 CDS YP_001432364.1 156742235 5539744 2914950..2915231 1 NC_009767.1 KEGG: rrs:RoseRS_1629 membrane protein-like protein; hypothetical protein 2915231 5539744 Rcas_2263 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432364.1 2914950 D 383372 CDS YP_001432365.1 156742236 5539745 2915250..2917418 1 NC_009767.1 PFAM: Na+/solute symporter; KEGG: rrs:RoseRS_1628 Na+/solute symporter; Na+/solute symporter 2917418 5539745 Rcas_2264 Roseiflexus castenholzii DSM 13941 Na+/solute symporter YP_001432365.1 2915250 D 383372 CDS YP_001432366.1 156742237 5539746 2917624..2918826 1 NC_009767.1 PFAM: sodium/hydrogen exchanger; KEGG: pfu:PF0275 Na+/H+ antiporter; sodium/hydrogen exchanger 2918826 5539746 Rcas_2265 Roseiflexus castenholzii DSM 13941 sodium/hydrogen exchanger YP_001432366.1 2917624 D 383372 CDS YP_001432367.1 156742238 5539747 complement(2919456..2920628) 1 NC_009767.1 KEGG: rrs:RoseRS_1626 hypothetical protein; hypothetical protein 2920628 5539747 Rcas_2266 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432367.1 2919456 R 383372 CDS YP_001432368.1 156742239 5539748 complement(2920643..2920906) 1 NC_009767.1 KEGG: rrs:RoseRS_1625 hypothetical protein; hypothetical protein 2920906 5539748 Rcas_2267 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432368.1 2920643 R 383372 CDS YP_001432369.1 156742240 5539749 complement(2920903..2921166) 1 NC_009767.1 KEGG: rrs:RoseRS_1624 hypothetical protein; hypothetical protein 2921166 5539749 Rcas_2268 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432369.1 2920903 R 383372 CDS YP_001432370.1 156742241 5539750 complement(2921420..2924032) 1 NC_009767.1 KEGG: rrs:RoseRS_1623 helicase; helicase 2924032 5539750 Rcas_2269 Roseiflexus castenholzii DSM 13941 helicase YP_001432370.1 2921420 R 383372 CDS YP_001432371.1 156742242 5539751 complement(2924204..2925037) 1 NC_009767.1 KEGG: rrs:RoseRS_1622 hypothetical protein; hypothetical protein 2925037 5539751 Rcas_2270 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432371.1 2924204 R 383372 CDS YP_001432372.1 156742243 5539752 complement(2925105..2925800) 1 NC_009767.1 KEGG: rrs:RoseRS_1621 FHA domain containing protein; FHA domain-containing protein 2925800 5539752 Rcas_2271 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432372.1 2925105 R 383372 CDS YP_001432373.1 156742244 5539753 complement(2926403..2927188) 1 NC_009767.1 KEGG: gvi:glr3087 hypothetical protein; hypothetical protein 2927188 5539753 Rcas_2272 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432373.1 2926403 R 383372 CDS YP_001432374.1 156742245 5539754 complement(2927291..2927665) 1 NC_009767.1 hypothetical protein 2927665 5539754 Rcas_2273 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432374.1 2927291 R 383372 CDS YP_001432375.1 156742246 5539755 2927860..2931207 1 NC_009767.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: rrs:RoseRS_1513 protease-associated PA domain protein; protease domain-containing protein 2931207 5539755 Rcas_2274 Roseiflexus castenholzii DSM 13941 protease domain-containing protein YP_001432375.1 2927860 D 383372 CDS YP_001432376.1 156742247 5539756 complement(2931960..2932649) 1 NC_009767.1 KEGG: rrs:RoseRS_1515 hypothetical protein; hypothetical protein 2932649 5539756 Rcas_2275 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432376.1 2931960 R 383372 CDS YP_001432377.1 156742248 5539757 complement(2933225..2934475) 1 NC_009767.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gsu:GSU0493 pyridine nucleotide-disulphide oxidoreductase family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2934475 5539757 Rcas_2276 Roseiflexus castenholzii DSM 13941 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001432377.1 2933225 R 383372 CDS YP_001432378.1 156742249 5539758 2934626..2937370 1 NC_009767.1 PFAM: peptidase C11 clostripain; KEGG: rrs:RoseRS_1520 FHA domain containing protein; peptidase C11 clostripain 2937370 5539758 Rcas_2277 Roseiflexus castenholzii DSM 13941 peptidase C11 clostripain YP_001432378.1 2934626 D 383372 CDS YP_001432379.1 156742250 5539759 2937843..2940101 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1519 protein kinase; serine/threonine protein kinase 2940101 5539759 Rcas_2278 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001432379.1 2937843 D 383372 CDS YP_001432380.1 156742251 5539760 complement(2940049..2940777) 1 NC_009767.1 KEGG: rrs:RoseRS_1518 hypothetical protein; hypothetical protein 2940777 5539760 Rcas_2279 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432380.1 2940049 R 383372 CDS YP_001432381.1 156742252 5539761 2940933..2941832 1 NC_009767.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH3305 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2941832 5539761 Rcas_2280 Roseiflexus castenholzii DSM 13941 glyoxalase/bleomycin resistance protein/dioxygenase YP_001432381.1 2940933 D 383372 CDS YP_001432382.1 156742253 5539762 complement(2942014..2943570) 1 NC_009767.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 2943570 5539762 Rcas_2281 Roseiflexus castenholzii DSM 13941 glycine dehydrogenase subunit 2 YP_001432382.1 2942014 R 383372 CDS YP_001432383.1 156742254 5539763 complement(2944074..2944991) 1 NC_009767.1 KEGG: rrs:RoseRS_1523 hypothetical protein; hypothetical protein 2944991 5539763 Rcas_2282 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432383.1 2944074 R 383372 CDS YP_001432384.1 156742255 5539764 complement(2945210..2946547) 1 NC_009767.1 PFAM: glycine cleavage system P-protein; KEGG: rrs:RoseRS_1524 glycine dehydrogenase (decarboxylating); glycine dehydrogenase 2946547 5539764 Rcas_2283 Roseiflexus castenholzii DSM 13941 glycine dehydrogenase YP_001432384.1 2945210 R 383372 CDS YP_001432385.1 156742256 5539765 complement(2946790..2947179) 1 NC_009767.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: rrs:RoseRS_1525 glycine cleavage system H protein; glycine cleavage system H protein 2947179 5539765 Rcas_2284 Roseiflexus castenholzii DSM 13941 glycine cleavage system H protein YP_001432385.1 2946790 R 383372 CDS YP_001432386.1 156742257 5539766 complement(2947221..2948333) 1 NC_009767.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rrs:RoseRS_1526 glycine cleavage system T protein; glycine cleavage system T protein 2948333 5539766 Rcas_2285 Roseiflexus castenholzii DSM 13941 glycine cleavage system T protein YP_001432386.1 2947221 R 383372 CDS YP_001432387.1 156742258 5539767 complement(2948618..2949409) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_1527 response regulator receiver protein; response regulator receiver protein 2949409 5539767 Rcas_2286 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001432387.1 2948618 R 383372 CDS YP_001432388.1 156742259 5539768 complement(2949372..2952338) 1 NC_009767.1 SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_1528 PBS lyase heat domain protein repeat-containing protein; PBS lyase 2952338 5539768 Rcas_2287 Roseiflexus castenholzii DSM 13941 PBS lyase YP_001432388.1 2949372 R 383372 CDS YP_001432389.1 156742260 5539769 2952581..2954896 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1529 protein kinase; serine/threonine protein kinase 2954896 5539769 Rcas_2288 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001432389.1 2952581 D 383372 CDS YP_001432390.1 156742261 5539770 2954953..2956095 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1530 glycosyl transferase, group 1; group 1 glycosyl transferase 2956095 5539770 Rcas_2289 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432390.1 2954953 D 383372 CDS YP_001432391.1 156742262 5539771 2956290..2957477 1 NC_009767.1 KEGG: rrs:RoseRS_1532 PT repeat-containing protein; PT repeat-containing protein 2957477 5539771 Rcas_2290 Roseiflexus castenholzii DSM 13941 PT repeat-containing protein YP_001432391.1 2956290 D 383372 CDS YP_001432392.1 156742263 5539772 complement(2957634..2958251) 1 NC_009767.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 2958251 recR 5539772 recR Roseiflexus castenholzii DSM 13941 recombination protein RecR YP_001432392.1 2957634 R 383372 CDS YP_001432393.1 156742264 5539773 complement(2958458..2958760) 1 NC_009767.1 PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_1534 conserved hypothetical protein 103; hypothetical protein 2958760 5539773 Rcas_2292 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432393.1 2958458 R 383372 CDS YP_001432394.1 156742265 5539774 complement(2958776..2960710) 1 NC_009767.1 KEGG: rrs:RoseRS_1535 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 2960710 5539774 Rcas_2293 Roseiflexus castenholzii DSM 13941 DNA polymerase III subunits gamma and tau YP_001432394.1 2958776 R 383372 CDS YP_001432395.1 156742266 5539775 complement(2960847..2961806) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2797 protein of unknown function DUF820; hypothetical protein 2961806 5539775 Rcas_2294 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432395.1 2960847 R 383372 CDS YP_001432396.1 156742267 5539776 2962197..2963141 1 NC_009767.1 KEGG: rrs:RoseRS_1536 hypothetical protein; hypothetical protein 2963141 5539776 Rcas_2295 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432396.1 2962197 D 383372 CDS YP_001432397.1 156742268 5539777 complement(2963303..2964157) 1 NC_009767.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_1537 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 2964157 5539777 Rcas_2296 Roseiflexus castenholzii DSM 13941 xylose isomerase domain-containing protein YP_001432397.1 2963303 R 383372 CDS YP_001432398.1 156742269 5539778 complement(2964179..2965111) 1 NC_009767.1 PFAM: protein of unknown function DUF849; KEGG: rrs:RoseRS_1538 protein of unknown function DUF849; hypothetical protein 2965111 5539778 Rcas_2297 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432398.1 2964179 R 383372 CDS YP_001432399.1 156742270 5539779 complement(2965130..2965834) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1539 ABC transporter related; ABC transporter-like protein 2965834 5539779 Rcas_2298 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432399.1 2965130 R 383372 CDS YP_001432400.1 156742271 5539780 complement(2965821..2966549) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1540 ABC transporter related; ABC transporter-like protein 2966549 5539780 Rcas_2299 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432400.1 2965821 R 383372 CDS YP_001432401.1 156742272 5539781 complement(2966843..2967604) 1 NC_009767.1 PFAM: cyclase family protein; KEGG: rrs:RoseRS_1541 cyclase family protein; cyclase family protein 2967604 5539781 Rcas_2300 Roseiflexus castenholzii DSM 13941 cyclase family protein YP_001432401.1 2966843 R 383372 CDS YP_001432402.1 156742273 5539782 complement(2967601..2968587) 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: bbr:BB1491 high-affinity branched-chain amino acid transporter membrane protein; inner-membrane translocator 2968587 5539782 Rcas_2301 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001432402.1 2967601 R 383372 CDS YP_001432403.1 156742274 5539783 complement(2968600..2969469) 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_1543 inner-membrane translocator; inner-membrane translocator 2969469 5539783 Rcas_2302 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001432403.1 2968600 R 383372 CDS YP_001432404.1 156742275 5539784 complement(2969476..2970774) 1 NC_009767.1 PFAM: Extracellular ligand-binding receptor; KEGG: rrs:RoseRS_1544 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2970774 5539784 Rcas_2303 Roseiflexus castenholzii DSM 13941 extracellular ligand-binding receptor YP_001432404.1 2969476 R 383372 CDS YP_001432405.1 156742276 5539785 complement(2970814..2971488) 1 NC_009767.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rrs:RoseRS_1545 GntR domain protein; GntR family transcriptional regulator 2971488 5539785 Rcas_2304 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001432405.1 2970814 R 383372 CDS YP_001432406.1 156742277 5539786 2971655..2973205 1 NC_009767.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_1548 delta-1-pyrroline-5-carboxylate dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 2973205 5539786 Rcas_2305 Roseiflexus castenholzii DSM 13941 delta-1-pyrroline-5-carboxylate dehydrogenase YP_001432406.1 2971655 D 383372 CDS YP_001432407.1 156742278 5539787 2973974..2975470 1 NC_009767.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: rrs:RoseRS_1549 carboxypeptidase Taq; carboxypeptidase Taq 2975470 5539787 Rcas_2306 Roseiflexus castenholzii DSM 13941 carboxypeptidase Taq YP_001432407.1 2973974 D 383372 CDS YP_001432408.1 156742279 5539788 2975561..2976274 1 NC_009767.1 PFAM: Rare lipoprotein A; KEGG: rrs:RoseRS_1550 rare lipoprotein A; rare lipoprotein A 2976274 5539788 Rcas_2307 Roseiflexus castenholzii DSM 13941 rare lipoprotein A YP_001432408.1 2975561 D 383372 CDS YP_001432409.1 156742280 5539789 2976530..2978377 1 NC_009767.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rrs:RoseRS_1551 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2978377 5539789 Rcas_2308 Roseiflexus castenholzii DSM 13941 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001432409.1 2976530 D 383372 CDS YP_001432410.1 156742281 5539790 2978672..2979718 1 NC_009767.1 catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 2979718 5539790 Rcas_2309 Roseiflexus castenholzii DSM 13941 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_001432410.1 2978672 D 383372 CDS YP_001432411.1 156742282 5539791 2979827..2980192 1 NC_009767.1 PFAM: regulatory protein ArsR; KEGG: rrs:RoseRS_1223 regulatory protein, ArsR; ArsR family transcriptional regulator 2980192 5539791 Rcas_2310 Roseiflexus castenholzii DSM 13941 ArsR family transcriptional regulator YP_001432411.1 2979827 D 383372 CDS YP_001432412.1 156742283 5539792 2980459..2980953 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rxy:Rxyl_2877 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2980953 5539792 Rcas_2311 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001432412.1 2980459 D 383372 CDS YP_001432413.1 156742284 5539793 2980904..2981734 1 NC_009767.1 PFAM: RNA methylase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1224 methyltransferase type 11; type 11 methyltransferase 2981734 5539793 Rcas_2312 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001432413.1 2980904 D 383372 CDS YP_001432414.1 156742285 5539794 complement(2981839..2983137) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1225 major facilitator superfamily MFS_1; major facilitator transporter 2983137 5539794 Rcas_2313 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432414.1 2981839 R 383372 CDS YP_001432415.1 156742286 5539795 complement(2983185..2984195) 1 NC_009767.1 KEGG: rrs:RoseRS_1226 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2984195 5539795 Rcas_2314 Roseiflexus castenholzii DSM 13941 glyceraldehyde-3-phosphate dehydrogenase YP_001432415.1 2983185 R 383372 CDS YP_001432416.1 156742287 5539796 complement(2984225..2985001) 1 NC_009767.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein ArsR; KEGG: rrs:RoseRS_1227 protein tyrosine phosphatase; ArsR family transcriptional regulator 2985001 5539796 Rcas_2315 Roseiflexus castenholzii DSM 13941 ArsR family transcriptional regulator YP_001432416.1 2984225 R 383372 CDS YP_001432417.1 156742288 5539797 complement(2985019..2985786) 1 NC_009767.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein ArsR; KEGG: rrs:RoseRS_1228 protein tyrosine phosphatase; ArsR family transcriptional regulator 2985786 5539797 Rcas_2316 Roseiflexus castenholzii DSM 13941 ArsR family transcriptional regulator YP_001432417.1 2985019 R 383372 CDS YP_001432418.1 156742289 5539798 complement(2986741..2988759) 1 NC_009767.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rrs:RoseRS_1692 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 2988759 5539798 Rcas_2317 Roseiflexus castenholzii DSM 13941 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001432418.1 2986741 R 383372 CDS YP_001432419.1 156742290 5539799 complement(2988883..2989398) 1 NC_009767.1 KEGG: rrs:RoseRS_1693 hypothetical protein; hypothetical protein 2989398 5539799 Rcas_2318 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432419.1 2988883 R 383372 CDS YP_001432420.1 156742291 5539800 complement(2989535..2990473) 1 NC_009767.1 KEGG: rrs:RoseRS_1694 UV damage repair endonuclease-like protein; UV damage repair endonuclease-like protein 2990473 5539800 Rcas_2319 Roseiflexus castenholzii DSM 13941 UV damage repair endonuclease-like protein YP_001432420.1 2989535 R 383372 CDS YP_001432421.1 156742292 5539801 2990594..2992117 1 NC_009767.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: rrs:RoseRS_1695 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 2992117 5539801 Rcas_2320 Roseiflexus castenholzii DSM 13941 glutamyl-tRNA synthetase YP_001432421.1 2990594 D 383372 CDS YP_001432422.1 156742293 5539802 complement(2992108..2992665) 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1696 FHA domain containing protein; FHA domain-containing protein 2992665 5539802 Rcas_2321 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432422.1 2992108 R 383372 CDS YP_001432423.1 156742294 5539803 2992991..2994235 1 NC_009767.1 PFAM: CBS domain containing protein; protein of unknown function DUF190; KEGG: rrs:RoseRS_1697 protein of unknown function DUF190; hypothetical protein 2994235 5539803 Rcas_2322 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432423.1 2992991 D 383372 CDS YP_001432424.1 156742295 5539804 complement(2994260..2995309) 1 NC_009767.1 PFAM: Polyprenyl synthetase; KEGG: rrs:RoseRS_1698 polyprenyl synthetase; polyprenyl synthetase 2995309 5539804 Rcas_2323 Roseiflexus castenholzii DSM 13941 polyprenyl synthetase YP_001432424.1 2994260 R 383372 CDS YP_001432425.1 156742296 5539805 complement(2995568..2996209) 1 NC_009767.1 PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_1699 phosphoglycerate mutase; phosphoglycerate mutase 2996209 5539805 Rcas_2324 Roseiflexus castenholzii DSM 13941 phosphoglycerate mutase YP_001432425.1 2995568 R 383372 CDS YP_001432426.1 156742297 5539806 2996345..2997277 1 NC_009767.1 KEGG: rrs:RoseRS_1700 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2997277 5539806 Rcas_2325 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432426.1 2996345 D 383372 CDS YP_001432427.1 156742298 5539807 complement(2997320..2999758) 1 NC_009767.1 PFAM: peptidase C1A papain; KEGG: rrs:RoseRS_2451 peptidase C1A, papain; peptidase C1A papain 2999758 5539807 Rcas_2326 Roseiflexus castenholzii DSM 13941 peptidase C1A papain YP_001432427.1 2997320 R 383372 CDS YP_001432428.1 156742299 5539808 3000323..3004528 1 NC_009767.1 PFAM: Fibronectin type III domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_2452 alpha amylase, catalytic region; alpha amylase catalytic domain-containing protein 3004528 5539808 Rcas_2327 Roseiflexus castenholzii DSM 13941 alpha amylase catalytic domain-containing protein YP_001432428.1 3000323 D 383372 CDS YP_001432429.1 156742300 5539809 complement(3005108..3005878) 1 NC_009767.1 PFAM: Protein of unknown function DUF1626; KEGG: rrs:RoseRS_0534 protein of unknown function DUF1626; hypothetical protein 3005878 5539809 Rcas_2328 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432429.1 3005108 R 383372 CDS YP_001432430.1 156742301 5539810 complement(3005881..3006480) 1 NC_009767.1 KEGG: rrs:RoseRS_0620 hypothetical protein; hypothetical protein 3006480 5539810 Rcas_2329 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432430.1 3005881 R 383372 CDS YP_001432431.1 156742302 5539811 3006681..3006959 1 NC_009767.1 PFAM: PspC domain protein; KEGG: rrs:RoseRS_2455 phage shock protein C, PspC; phage shock protein PspC 3006959 5539811 Rcas_2330 Roseiflexus castenholzii DSM 13941 phage shock protein PspC YP_001432431.1 3006681 D 383372 CDS YP_001432432.1 156742303 5539812 complement(3007069..3008667) 1 NC_009767.1 TIGRFAM: Acyltransferase WS/DGAT/MGAT family protein; PFAM: protein of unknown function UPF0089; KEGG: rrs:RoseRS_2456 protein of unknown function UPF0089; acyltransferase 3008667 5539812 Rcas_2331 Roseiflexus castenholzii DSM 13941 acyltransferase YP_001432432.1 3007069 R 383372 CDS YP_001432433.1 156742304 5539813 3008793..3009248 1 NC_009767.1 KEGG: rrs:RoseRS_2458 hypothetical protein; hypothetical protein 3009248 5539813 Rcas_2332 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432433.1 3008793 D 383372 CDS YP_001432434.1 156742305 5539814 3009451..3010239 1 NC_009767.1 PFAM: purine or other phosphorylase family 1; KEGG: rrs:RoseRS_2457 purine or other phosphorylase, family 1; purine phosphorylase family 1 3010239 5539814 Rcas_2333 Roseiflexus castenholzii DSM 13941 purine phosphorylase family 1 YP_001432434.1 3009451 D 383372 CDS YP_001432435.1 156742306 5539815 3010976..3012634 1 NC_009767.1 KEGG: rrs:RoseRS_2459 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 3012634 5539815 Rcas_2334 Roseiflexus castenholzii DSM 13941 cobalamin B12-binding domain-containing protein YP_001432435.1 3010976 D 383372 CDS YP_001432436.1 156742307 5539816 3012659..3013765 1 NC_009767.1 PFAM: NAD/NADP octopine/nopaline dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: rrs:RoseRS_2460 NAD/NADP octopine/nopaline dehydrogenase; NAD/NADP octopine/nopaline dehydrogenase 3013765 5539816 Rcas_2335 Roseiflexus castenholzii DSM 13941 NAD/NADP octopine/nopaline dehydrogenase YP_001432436.1 3012659 D 383372 CDS YP_001432437.1 156742308 5539817 3014989..3016485 1 NC_009767.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 3016485 asnB 5539817 asnB Roseiflexus castenholzii DSM 13941 asparagine synthetase B YP_001432437.1 3014989 D 383372 CDS YP_001432438.1 156742309 5539818 3016792..3017232 1 NC_009767.1 KEGG: rrs:RoseRS_2464 hypothetical protein; hypothetical protein 3017232 5539818 Rcas_2337 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432438.1 3016792 D 383372 CDS YP_001432439.1 156742310 5539819 complement(3017318..3017845) 1 NC_009767.1 PFAM: Ferritin Dps family protein; KEGG: rrs:RoseRS_2466 ferritin, Dps family protein; ferritin Dps family protein 3017845 5539819 Rcas_2338 Roseiflexus castenholzii DSM 13941 ferritin Dps family protein YP_001432439.1 3017318 R 383372 CDS YP_001432440.1 156742311 5539820 complement(3017945..3018286) 1 NC_009767.1 KEGG: rrs:RoseRS_2467 hypothetical protein; hypothetical protein 3018286 5539820 Rcas_2339 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432440.1 3017945 R 383372 CDS YP_001432441.1 156742312 5539821 complement(3018836..3019615) 1 NC_009767.1 TIGRFAM: LPXTG-motif cell wall anchor domain; KEGG: rrs:RoseRS_2469 LPXTG-motif cell wall anchor domain; cell wall anchor domain-containing protein 3019615 5539821 Rcas_2340 Roseiflexus castenholzii DSM 13941 cell wall anchor domain-containing protein YP_001432441.1 3018836 R 383372 CDS YP_001432442.1 156742313 5539822 complement(3019879..3020916) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2470 glycosyl transferase, group 1; group 1 glycosyl transferase 3020916 5539822 Rcas_2341 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432442.1 3019879 R 383372 CDS YP_001432443.1 156742314 5539823 complement(3020926..3022137) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2471 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3022137 5539823 Rcas_2342 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001432443.1 3020926 R 383372 CDS YP_001432444.1 156742315 5539824 complement(3022380..3023483) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2472 methyltransferase type 11; type 11 methyltransferase 3023483 5539824 Rcas_2343 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001432444.1 3022380 R 383372 CDS YP_001432445.1 156742316 5539825 3023825..3024859 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2473 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3024859 5539825 Rcas_2344 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001432445.1 3023825 D 383372 CDS YP_001432446.1 156742317 5539826 3025402..3031011 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2009 TPR repeat-containing protein; hypothetical protein 3031011 5539826 Rcas_2345 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432446.1 3025402 D 383372 CDS YP_001432447.1 156742318 5539827 complement(3031076..3031468) 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3040 HEPN domain protein; HEPN domain-containing protein 3031468 5539827 Rcas_2346 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001432447.1 3031076 R 383372 CDS YP_001432448.1 156742319 5539828 complement(3031452..3031802) 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3041 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3031802 5539828 Rcas_2347 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001432448.1 3031452 R 383372 CDS YP_001432449.1 156742320 5539829 3031884..3032648 1 NC_009767.1 KEGG: rrs:RoseRS_2010 hypothetical protein; hypothetical protein 3032648 5539829 Rcas_2348 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432449.1 3031884 D 383372 CDS YP_001432450.1 156742321 5539830 3033190..3033450 1 NC_009767.1 PFAM: protein of unknown function UPF0175; KEGG: cph:Cpha266_0647 hypothetical protein; hypothetical protein 3033450 5539830 Rcas_2349 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432450.1 3033190 D 383372 CDS YP_001432451.1 156742322 5539831 3033443..3033937 1 NC_009767.1 KEGG: tko:TK0918 hypothetical protein; hypothetical protein 3033937 5539831 Rcas_2350 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432451.1 3033443 D 383372 CDS YP_001432452.1 156742323 5539832 complement(3034170..3034409) 1 NC_009767.1 hypothetical protein 3034409 5539832 Rcas_2351 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432452.1 3034170 R 383372 CDS YP_001432453.1 156742324 5539833 3034888..3035088 1 NC_009767.1 hypothetical protein 3035088 5539833 Rcas_2352 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432453.1 3034888 D 383372 CDS YP_001432454.1 156742325 5539834 3035121..3036050 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2474 ABC transporter related; ABC transporter-like protein 3036050 5539834 Rcas_2353 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432454.1 3035121 D 383372 CDS YP_001432455.1 156742326 5539835 3036070..3036972 1 NC_009767.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: rrs:RoseRS_2475 ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase A 3036972 5539835 Rcas_2354 Roseiflexus castenholzii DSM 13941 ribosome small subunit-dependent GTPase A YP_001432455.1 3036070 D 383372 CDS YP_001432456.1 156742327 5539836 3037144..3037746 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2476 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3037746 5539836 Rcas_2355 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001432456.1 3037144 D 383372 CDS YP_001432457.1 156742328 5539837 3037750..3038610 1 NC_009767.1 PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_2477 ABC-2 type transporter; ABC-2 type transporter 3038610 5539837 Rcas_2356 Roseiflexus castenholzii DSM 13941 ABC-2 type transporter YP_001432457.1 3037750 D 383372 CDS YP_001432458.1 156742329 5539838 3039417..3040775 1 NC_009767.1 KEGG: rrs:RoseRS_2478 hypothetical protein; hypothetical protein 3040775 5539838 Rcas_2357 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432458.1 3039417 D 383372 CDS YP_001432459.1 156742330 5539839 complement(3042809..3043939) 1 NC_009767.1 PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_2479 ABC-2 type transporter; ABC-2 type transporter 3043939 5539839 Rcas_2358 Roseiflexus castenholzii DSM 13941 ABC-2 type transporter YP_001432459.1 3042809 R 383372 CDS YP_001432460.1 156742331 5539840 complement(3043952..3045187) 1 NC_009767.1 PFAM: beta-lactamase; KEGG: rrs:RoseRS_2480 beta-lactamase; beta-lactamase 3045187 5539840 Rcas_2359 Roseiflexus castenholzii DSM 13941 beta-lactamase YP_001432460.1 3043952 R 383372 CDS YP_001432461.1 156742332 5539841 complement(3045255..3046490) 1 NC_009767.1 PFAM: PAS fold-4 domain protein; KEGG: rrs:RoseRS_2481 PAS fold-4 domain protein; PAS domain-containing protein 3046490 5539841 Rcas_2360 Roseiflexus castenholzii DSM 13941 PAS domain-containing protein YP_001432461.1 3045255 R 383372 CDS YP_001432462.1 156742333 5539843 3047442..3049628 1 NC_009767.1 KEGG: rrs:RoseRS_2483 dehydrogenase-like protein; dehydrogenase-like protein 3049628 5539843 Rcas_2362 Roseiflexus castenholzii DSM 13941 dehydrogenase-like protein YP_001432462.1 3047442 D 383372 CDS YP_001432463.1 156742334 5539844 3049633..3050049 1 NC_009767.1 PFAM: cytochrome c class I; KEGG: rrs:RoseRS_2484 cytochrome c, class I; cytochrome c class I 3050049 5539844 Rcas_2363 Roseiflexus castenholzii DSM 13941 cytochrome c class I YP_001432463.1 3049633 D 383372 CDS YP_001432464.1 156742335 5539845 complement(3050152..3051210) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2485 alpha/beta hydrolase fold; alpha/beta hydrolase 3051210 5539845 Rcas_2364 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001432464.1 3050152 R 383372 CDS YP_001432465.1 156742336 5539846 complement(3051213..3051983) 1 NC_009767.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rrs:RoseRS_2486 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 3051983 5539846 Rcas_2365 Roseiflexus castenholzii DSM 13941 cobyrinic acid ac-diamide synthase YP_001432465.1 3051213 R 383372 CDS YP_001432466.1 156742337 5539847 complement(3052067..3052678) 1 NC_009767.1 KEGG: rrs:RoseRS_2487 conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein; flavoprotein oxygenase DIM6/NTAB family-like protein 3052678 5539847 Rcas_2366 Roseiflexus castenholzii DSM 13941 flavoprotein oxygenase DIM6/NTAB family-like protein YP_001432466.1 3052067 R 383372 CDS YP_001432467.1 156742338 5539848 3052834..3053814 1 NC_009767.1 KEGG: rrs:RoseRS_2488 hypothetical protein; hypothetical protein 3053814 5539848 Rcas_2367 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432467.1 3052834 D 383372 CDS YP_001432468.1 156742339 5539849 3053811..3054239 1 NC_009767.1 PFAM: protein of unknown function DUF55; KEGG: rrs:RoseRS_2489 protein of unknown function DUF55; hypothetical protein 3054239 5539849 Rcas_2368 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432468.1 3053811 D 383372 CDS YP_001432469.1 156742340 5539850 complement(3054394..3055929) 1 NC_009767.1 KEGG: rrs:RoseRS_2490 hypothetical protein; hypothetical protein 3055929 5539850 Rcas_2369 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432469.1 3054394 R 383372 CDS YP_001432470.1 156742341 5539851 3056127..3057278 1 NC_009767.1 KEGG: eca:ECA2426 oligogalacturonate lyase; oligogalacturonide lyase 3057278 5539851 Rcas_2370 Roseiflexus castenholzii DSM 13941 oligogalacturonide lyase YP_001432470.1 3056127 D 383372 CDS YP_001432471.1 156742342 5539852 complement(3057305..3059119) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: llm:llmg_0063 sulphate transporter; sulfate transporter 3059119 5539852 Rcas_2371 Roseiflexus castenholzii DSM 13941 sulfate transporter YP_001432471.1 3057305 R 383372 CDS YP_001432472.1 156742343 5539853 complement(3059333..3059683) 1 NC_009767.1 PFAM: regulatory protein ArsR; KEGG: bcz:pE33L466_0439 transcriptional regulator; ArsR family transcriptional regulator 3059683 5539853 Rcas_2372 Roseiflexus castenholzii DSM 13941 ArsR family transcriptional regulator YP_001432472.1 3059333 R 383372 CDS YP_001432473.1 156742344 5539854 complement(3059941..3061215) 1 NC_009767.1 KEGG: rrs:RoseRS_4189 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor protein 3061215 5539854 Rcas_2373 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001432473.1 3059941 R 383372 CDS YP_001432474.1 156742345 5539855 complement(3061383..3061874) 1 NC_009767.1 KEGG: hch:HCH_02935 hypothetical protein; hypothetical protein 3061874 5539855 Rcas_2374 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432474.1 3061383 R 383372 CDS YP_001432475.1 156742346 5539856 complement(3061893..3062372) 1 NC_009767.1 hypothetical protein 3062372 5539856 Rcas_2375 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432475.1 3061893 R 383372 CDS YP_001432476.1 156742347 5539857 3062419..3063447 1 NC_009767.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr1331 probable transcriptional regulator; AraC family transcriptional regulator 3063447 5539857 Rcas_2376 Roseiflexus castenholzii DSM 13941 AraC family transcriptional regulator YP_001432476.1 3062419 D 383372 CDS YP_001432477.1 156742348 5539858 3063554..3066370 1 NC_009767.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: rrs:RoseRS_2753 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 3066370 5539858 Rcas_2377 Roseiflexus castenholzii DSM 13941 phosphoenolpyruvate carboxylase YP_001432477.1 3063554 D 383372 CDS YP_001432478.1 156742349 5539859 complement(3066379..3067011) 1 NC_009767.1 KEGG: rrs:RoseRS_2754 hypothetical protein; hypothetical protein 3067011 5539859 Rcas_2378 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432478.1 3066379 R 383372 CDS YP_001432479.1 156742350 5539860 3067343..3069370 1 NC_009767.1 PFAM: VanW family protein; KEGG: rrs:RoseRS_2755 VanW family protein; von Willebrand factor A 3069370 5539860 Rcas_2379 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001432479.1 3067343 D 383372 CDS YP_001432480.1 156742351 5539861 complement(3069420..3069965) 1 NC_009767.1 KEGG: rrs:RoseRS_2756 hypothetical protein; hypothetical protein 3069965 5539861 Rcas_2380 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432480.1 3069420 R 383372 CDS YP_001432481.1 156742352 5539862 3070217..3070684 1 NC_009767.1 KEGG: rrs:RoseRS_2757 hypothetical protein; hypothetical protein 3070684 5539862 Rcas_2381 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432481.1 3070217 D 383372 CDS YP_001432482.1 156742353 5539863 3070697..3071365 1 NC_009767.1 PFAM: Endonuclease V; KEGG: rrs:RoseRS_2758 deoxyribonuclease V; deoxyribonuclease V 3071365 5539863 Rcas_2382 Roseiflexus castenholzii DSM 13941 deoxyribonuclease V YP_001432482.1 3070697 D 383372 CDS YP_001432483.1 156742354 5539864 3071713..3072366 1 NC_009767.1 hypothetical protein 3072366 5539864 Rcas_2383 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432483.1 3071713 D 383372 CDS YP_001432484.1 156742355 5539865 3072445..3072876 1 NC_009767.1 KEGG: rrs:RoseRS_2759 hypothetical protein; hypothetical protein 3072876 5539865 Rcas_2384 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432484.1 3072445 D 383372 CDS YP_001432485.1 156742356 5539866 complement(3073093..3073764) 1 NC_009767.1 PFAM: protein of unknown function DUF192; KEGG: rrs:RoseRS_2760 protein of unknown function DUF192; hypothetical protein 3073764 5539866 Rcas_2385 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432485.1 3073093 R 383372 CDS YP_001432486.1 156742357 5539867 complement(3073770..3075209) 1 NC_009767.1 TIGRFAM: Acyltransferase WS/DGAT/MGAT family protein; PFAM: protein of unknown function UPF0089; KEGG: rrs:RoseRS_2761 protein of unknown function UPF0089; acyltransferase 3075209 5539867 Rcas_2386 Roseiflexus castenholzii DSM 13941 acyltransferase YP_001432486.1 3073770 R 383372 CDS YP_001432487.1 156742358 5539868 3075360..3075734 1 NC_009767.1 hypothetical protein 3075734 5539868 Rcas_2387 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432487.1 3075360 D 383372 CDS YP_001432488.1 156742359 5539869 complement(3076177..3077223) 1 NC_009767.1 PFAM: NMT1/THI5 like domain protein; KEGG: rrs:RoseRS_2762 membrane lipoprotein lipid attachment site; NMT1/THI5-like domain-containing protein 3077223 5539869 Rcas_2388 Roseiflexus castenholzii DSM 13941 NMT1/THI5-like domain-containing protein YP_001432488.1 3076177 R 383372 CDS YP_001432489.1 156742360 5539870 complement(3077223..3078050) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2763 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3078050 5539870 Rcas_2389 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432489.1 3077223 R 383372 CDS YP_001432490.1 156742361 5539871 complement(3078516..3079562) 1 NC_009767.1 PFAM: ROK family protein; KEGG: rrs:RoseRS_2764 ROK family protein; ROK family protein 3079562 5539871 Rcas_2390 Roseiflexus castenholzii DSM 13941 ROK family protein YP_001432490.1 3078516 R 383372 CDS YP_001432491.1 156742362 5539872 3079731..3080999 1 NC_009767.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2765 protein phosphatase 2C domain protein; Ser/Thr phosphatase 3080999 5539872 Rcas_2391 Roseiflexus castenholzii DSM 13941 Ser/Thr phosphatase YP_001432491.1 3079731 D 383372 CDS YP_001432492.1 156742363 5539873 3081040..3082833 1 NC_009767.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2766 protein phosphatase 2C domain protein; Ser/Thr phosphatase 3082833 5539873 Rcas_2392 Roseiflexus castenholzii DSM 13941 Ser/Thr phosphatase YP_001432492.1 3081040 D 383372 CDS YP_001432493.1 156742364 5539874 3082835..3084208 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_2767 protein kinase; serine/threonine protein kinase 3084208 5539874 Rcas_2393 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001432493.1 3082835 D 383372 CDS YP_001432494.1 156742365 5539875 3084284..3085522 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2768 von Willebrand factor, type A; von Willebrand factor A 3085522 5539875 Rcas_2394 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001432494.1 3084284 D 383372 CDS YP_001432495.1 156742366 5539876 3085550..3087067 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_2769 FHA domain containing protein; FHA domain-containing protein 3087067 5539876 Rcas_2395 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432495.1 3085550 D 383372 CDS YP_001432496.1 156742367 5539878 complement(3088442..3089275) 1 NC_009767.1 KEGG: rrs:RoseRS_2772 TIM-barrel enzyme possibly a dioxygenase-like protein; hypothetical protein 3089275 5539878 Rcas_2397 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432496.1 3088442 R 383372 CDS YP_001432497.1 156742368 5539879 complement(3089277..3090512) 1 NC_009767.1 PFAM: protein of unknown function UPF0261; KEGG: rrs:RoseRS_2773 protein of unknown function UPF0261; hypothetical protein 3090512 5539879 Rcas_2398 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432497.1 3089277 R 383372 CDS YP_001432498.1 156742369 5539880 complement(3090543..3090947) 1 NC_009767.1 KEGG: rrs:RoseRS_2774 hypothetical protein; hypothetical protein 3090947 5539880 Rcas_2399 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432498.1 3090543 R 383372 CDS YP_001432499.1 156742370 5539881 complement(3091029..3092426) 1 NC_009767.1 KEGG: rrs:RoseRS_2775 hypothetical protein; hypothetical protein 3092426 5539881 Rcas_2400 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432499.1 3091029 R 383372 CDS YP_001432500.1 156742371 5539882 complement(3092677..3093765) 1 NC_009767.1 TIGRFAM: polymorphic outer membrane protein; SMART: Parallel beta-helix repeat; KEGG: rba:RB4375 probable extracellular nuclease; polymorphic outer membrane protein 3093765 5539882 Rcas_2401 Roseiflexus castenholzii DSM 13941 polymorphic outer membrane protein YP_001432500.1 3092677 R 383372 CDS YP_001432501.1 156742372 5539884 complement(3097145..3097669) 1 NC_009767.1 PFAM: ThiJ/PfpI domain protein; KEGG: rrs:RoseRS_2580 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 3097669 5539884 Rcas_2403 Roseiflexus castenholzii DSM 13941 ThiJ/PfpI domain-containing protein YP_001432501.1 3097145 R 383372 CDS YP_001432502.1 156742373 5539885 complement(3098584..3098784) 1 NC_009767.1 KEGG: rrs:RoseRS_2579 hypothetical protein; hypothetical protein 3098784 5539885 Rcas_2404 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432502.1 3098584 R 383372 CDS YP_001432503.1 156742374 5539886 complement(3098798..3099601) 1 NC_009767.1 PFAM: Hydratase/decarboxylase; KEGG: rrs:RoseRS_2578 4-oxalocrotonate decarboxylase; 4-oxalocrotonate decarboxylase 3099601 5539886 Rcas_2405 Roseiflexus castenholzii DSM 13941 4-oxalocrotonate decarboxylase YP_001432503.1 3098798 R 383372 CDS YP_001432504.1 156742375 5539887 complement(3099583..3101037) 1 NC_009767.1 PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_2577 aldehyde dehydrogenase; aldehyde dehydrogenase 3101037 5539887 Rcas_2406 Roseiflexus castenholzii DSM 13941 aldehyde dehydrogenase YP_001432504.1 3099583 R 383372 CDS YP_001432505.1 156742376 5539888 complement(3101037..3101771) 1 NC_009767.1 PFAM: Hydratase/decarboxylase; KEGG: rrs:RoseRS_2576 hydratase/decarboxylase; hydratase/decarboxylase 3101771 5539888 Rcas_2407 Roseiflexus castenholzii DSM 13941 hydratase/decarboxylase YP_001432505.1 3101037 R 383372 CDS YP_001432506.1 156742377 5539889 complement(3101755..3101967) 1 NC_009767.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: rrs:RoseRS_2575 4-oxalocrotonate tautomerase family enzyme; 4-oxalocrotonate tautomerase 3101967 5539889 Rcas_2408 Roseiflexus castenholzii DSM 13941 4-oxalocrotonate tautomerase YP_001432506.1 3101755 R 383372 CDS YP_001432507.1 156742378 5539890 complement(3101980..3102525) 1 NC_009767.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: rrs:RoseRS_2574 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 3102525 5539890 Rcas_2409 Roseiflexus castenholzii DSM 13941 flavin reductase domain-containing protein YP_001432507.1 3101980 R 383372 CDS YP_001432508.1 156742379 5539891 complement(3103018..3104028) 1 NC_009767.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 3104028 5539891 Rcas_2410 Roseiflexus castenholzii DSM 13941 4-hydroxy-2-ketovalerate aldolase YP_001432508.1 3103018 R 383372 CDS YP_001432509.1 156742380 5539892 complement(3104025..3104942) 1 NC_009767.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 3104942 5539892 Rcas_2411 Roseiflexus castenholzii DSM 13941 acetaldehyde dehydrogenase YP_001432509.1 3104025 R 383372 CDS YP_001432510.1 156742381 5539893 complement(3104924..3105700) 1 NC_009767.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rrs:RoseRS_2571 regulatory protein, IclR; IclR family transcriptional regulator 3105700 5539893 Rcas_2412 Roseiflexus castenholzii DSM 13941 IclR family transcriptional regulator YP_001432510.1 3104924 R 383372 CDS YP_001432511.1 156742382 5539894 complement(3106211..3107218) 1 NC_009767.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_2570 catechol 2,3-dioxygenase; catechol 2,3-dioxygenase 3107218 5539894 Rcas_2413 Roseiflexus castenholzii DSM 13941 catechol 2,3-dioxygenase YP_001432511.1 3106211 R 383372 CDS YP_001432512.1 156742383 5539895 complement(3107245..3108810) 1 NC_009767.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: rrs:RoseRS_2569 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 3108810 5539895 Rcas_2414 Roseiflexus castenholzii DSM 13941 4-hydroxyphenylacetate 3-hydroxylase YP_001432512.1 3107245 R 383372 CDS YP_001432513.1 156742384 5539896 complement(3108854..3109150) 1 NC_009767.1 hypothetical protein 3109150 5539896 Rcas_2415 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432513.1 3108854 R 383372 CDS YP_001432514.1 156742385 5539897 3109254..3109565 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: gme:Gmet_0479 DNA polymerase, beta-like region; DNA polymerase subunit beta 3109565 5539897 Rcas_2416 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001432514.1 3109254 D 383372 CDS YP_001432515.1 156742386 5539898 3109546..3109920 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: syf:Synpcc7942_0275 hypothetical protein; hypothetical protein 3109920 5539898 Rcas_2417 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432515.1 3109546 D 383372 CDS YP_001432516.1 156742387 5539899 3109947..3111056 1 NC_009767.1 KEGG: rrs:RoseRS_2567 hypothetical protein; hypothetical protein 3111056 5539899 Rcas_2418 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432516.1 3109947 D 383372 CDS YP_001432517.1 156742388 5539900 complement(3111121..3112695) 1 NC_009767.1 hypothetical protein 3112695 5539900 Rcas_2419 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432517.1 3111121 R 383372 CDS YP_001432518.1 156742389 5539901 complement(3113063..3114172) 1 NC_009767.1 KEGG: rrs:RoseRS_2812 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3114172 5539901 Rcas_2420 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001432518.1 3113063 R 383372 CDS YP_001432519.1 156742390 5539902 complement(3114182..3115231) 1 NC_009767.1 KEGG: rrs:RoseRS_2811 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3115231 5539902 Rcas_2421 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001432519.1 3114182 R 383372 CDS YP_001432520.1 156742391 5539903 complement(3115244..3116371) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2810 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3116371 5539903 Rcas_2422 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432520.1 3115244 R 383372 CDS YP_001432521.1 156742392 5539904 complement(3116417..3117400) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2809 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3117400 5539904 Rcas_2423 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432521.1 3116417 R 383372 CDS YP_001432522.1 156742393 5539905 complement(3117599..3119785) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_2808 extracellular solute-binding protein, family 5; extracellular solute-binding protein 3119785 5539905 Rcas_2424 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001432522.1 3117599 R 383372 CDS YP_001432523.1 156742394 5539906 complement(3121155..3121574) 1 NC_009767.1 KEGG: rrs:RoseRS_2806 hypothetical protein; hypothetical protein 3121574 5539906 Rcas_2425 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432523.1 3121155 R 383372 CDS YP_001432524.1 156742395 5539907 complement(3121608..3122039) 1 NC_009767.1 KEGG: rrs:RoseRS_2807 hypothetical protein; hypothetical protein 3122039 5539907 Rcas_2426 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432524.1 3121608 R 383372 CDS YP_001432525.1 156742396 5539908 complement(3122132..3122749) 1 NC_009767.1 KEGG: rrs:RoseRS_2805 hypothetical protein; hypothetical protein 3122749 5539908 Rcas_2427 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432525.1 3122132 R 383372 CDS YP_001432526.1 156742397 5539909 3123073..3123267 1 NC_009767.1 TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 3123267 5539909 Rcas_2428 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S21 YP_001432526.1 3123073 D 383372 CDS YP_001432527.1 156742398 5539910 3123367..3124461 1 NC_009767.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3124461 prfA 5539910 prfA Roseiflexus castenholzii DSM 13941 peptide chain release factor 1 YP_001432527.1 3123367 D 383372 CDS YP_001432528.1 156742399 5539911 3124812..3125912 1 NC_009767.1 KEGG: rrs:RoseRS_2867 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 3125912 5539911 Rcas_2430 Roseiflexus castenholzii DSM 13941 adenosine deaminase YP_001432528.1 3124812 D 383372 CDS YP_001432529.1 156742400 5539912 complement(3125935..3126435) 1 NC_009767.1 KEGG: rrs:RoseRS_2866 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3126435 5539912 Rcas_2431 Roseiflexus castenholzii DSM 13941 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001432529.1 3125935 R 383372 CDS YP_001432530.1 156742401 5539913 3126553..3126990 1 NC_009767.1 PFAM: cyclase/dehydrase; KEGG: rrs:RoseRS_2865 cyclase/dehydrase; cyclase/dehydrase 3126990 5539913 Rcas_2432 Roseiflexus castenholzii DSM 13941 cyclase/dehydrase YP_001432530.1 3126553 D 383372 CDS YP_001432531.1 156742402 5539914 3126996..3127550 1 NC_009767.1 PFAM: phosphoribosyltransferase; KEGG: rrs:RoseRS_2864 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 3127550 5539914 Rcas_2433 Roseiflexus castenholzii DSM 13941 uracil phosphoribosyltransferase YP_001432531.1 3126996 D 383372 CDS YP_001432532.1 156742403 5539915 3127561..3128517 1 NC_009767.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 3128517 pyrB 5539915 pyrB Roseiflexus castenholzii DSM 13941 aspartate carbamoyltransferase YP_001432532.1 3127561 D 383372 CDS YP_001432533.1 156742404 5539916 3128529..3130022 1 NC_009767.1 KEGG: rrs:RoseRS_2862 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; dihydroorotase, multifunctional complex type 3130022 5539916 Rcas_2435 Roseiflexus castenholzii DSM 13941 dihydroorotase, multifunctional complex type YP_001432533.1 3128529 D 383372 CDS YP_001432534.1 156742405 5539917 3130022..3130813 1 NC_009767.1 KEGG: rrs:RoseRS_2861 hypothetical protein; hypothetical protein 3130813 5539917 Rcas_2436 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432534.1 3130022 D 383372 CDS YP_001432535.1 156742406 5539918 3131731..3132834 1 NC_009767.1 PFAM: dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_2860 dihydroorotate oxidase; dihydroorotate oxidase 3132834 5539918 Rcas_2437 Roseiflexus castenholzii DSM 13941 dihydroorotate oxidase YP_001432535.1 3131731 D 383372 CDS YP_001432536.1 156742407 5539919 complement(3133138..3134250) 1 NC_009767.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rrs:RoseRS_2859 mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; mandelate racemase/muconate lactonizing protein 3134250 5539919 Rcas_2438 Roseiflexus castenholzii DSM 13941 mandelate racemase/muconate lactonizing protein YP_001432536.1 3133138 R 383372 CDS YP_001432537.1 156742408 5539920 complement(3134247..3135098) 1 NC_009767.1 KEGG: rrs:RoseRS_2858 hypothetical protein; hypothetical protein 3135098 5539920 Rcas_2439 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432537.1 3134247 R 383372 CDS YP_001432538.1 156742409 5539921 complement(3135099..3135962) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2857 alpha/beta hydrolase fold; alpha/beta hydrolase 3135962 5539921 Rcas_2440 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001432538.1 3135099 R 383372 CDS YP_001432539.1 156742410 5539922 complement(3136108..3137193) 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:pRL90296 GFO/IDH/MocA oxidoreductase; oxidoreductase domain-containing protein 3137193 5539922 Rcas_2441 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432539.1 3136108 R 383372 CDS YP_001432540.1 156742411 5539923 complement(3137211..3138239) 1 NC_009767.1 PFAM: oxidoreductase domain protein; KEGG: sme:SMc04138 oxidoreductase; oxidoreductase domain-containing protein 3138239 5539923 Rcas_2442 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432540.1 3137211 R 383372 CDS YP_001432541.1 156742412 5539924 complement(3138256..3138591) 1 NC_009767.1 hypothetical protein 3138591 5539924 Rcas_2443 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432541.1 3138256 R 383372 CDS YP_001432542.1 156742413 5539925 complement(3138601..3140886) 1 NC_009767.1 KEGG: aor:AO090124000067 predicted protein; hypothetical protein 3140886 5539925 Rcas_2444 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432542.1 3138601 R 383372 CDS YP_001432543.1 156742414 5539926 complement(3140905..3141495) 1 NC_009767.1 hypothetical protein 3141495 5539926 Rcas_2445 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432543.1 3140905 R 383372 CDS YP_001432544.1 156742415 5539927 complement(3141510..3144122) 1 NC_009767.1 KEGG: sen:SACE_4832 hypothetical protein; hypothetical protein 3144122 5539927 Rcas_2446 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432544.1 3141510 R 383372 CDS YP_001432545.1 156742416 5539928 complement(3144125..3144880) 1 NC_009767.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: aau:AAur_pTC20129 cupin domain protein; cupin 3144880 5539928 Rcas_2447 Roseiflexus castenholzii DSM 13941 cupin YP_001432545.1 3144125 R 383372 CDS YP_001432546.1 156742417 5539929 complement(3144944..3146119) 1 NC_009767.1 KEGG: ent:Ent638_3297 oligogalacturonide lyase; hypothetical protein 3146119 5539929 Rcas_2448 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432546.1 3144944 R 383372 CDS YP_001432547.1 156742418 5539930 complement(3146131..3147492) 1 NC_009767.1 PFAM: glycoside hydrolase family 4; KEGG: tpt:Tpet_0970 glycoside hydrolase, family 4; glycoside hydrolase family protein 3147492 5539930 Rcas_2449 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001432547.1 3146131 R 383372 CDS YP_001432548.1 156742419 5539931 complement(3147562..3149334) 1 NC_009767.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: deh:cbdb_A1620 radical SAM/B12 binding domain protein; radical SAM domain-containing protein 3149334 5539931 Rcas_2450 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001432548.1 3147562 R 383372 CDS YP_001432549.1 156742420 5539932 complement(3149363..3150493) 1 NC_009767.1 KEGG: rrs:RoseRS_2811 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3150493 5539932 Rcas_2451 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001432549.1 3149363 R 383372 CDS YP_001432550.1 156742421 5539933 complement(3150468..3151631) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0865 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3151631 5539933 Rcas_2452 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432550.1 3150468 R 383372 CDS YP_001432551.1 156742422 5539934 complement(3151635..3152624) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_1683 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 3152624 5539934 Rcas_2453 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport systems inner membrane component YP_001432551.1 3151635 R 383372 CDS YP_001432552.1 156742423 5539935 complement(3152757..3154805) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: tpt:Tpet_1687 extracellular solute-binding protein, family 5; extracellular solute-binding protein 3154805 5539935 Rcas_2454 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001432552.1 3152757 R 383372 CDS YP_001432553.1 156742424 5539936 complement(3154966..3156015) 1 NC_009767.1 KEGG: rrs:RoseRS_2812 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3156015 5539936 Rcas_2455 Roseiflexus castenholzii DSM 13941 oligopeptide/dipeptide ABC transporter ATPase YP_001432553.1 3154966 R 383372 CDS YP_001432554.1 156742425 5539937 3156193..3157251 1 NC_009767.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_2856 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 3157251 5539937 Rcas_2456 Roseiflexus castenholzii DSM 13941 LacI family transcriptional regulator YP_001432554.1 3156193 D 383372 CDS YP_001432555.1 156742426 5539938 3157339..3158490 1 NC_009767.1 PFAM: oxidoreductase domain protein; KEGG: rrs:RoseRS_2855 oxidoreductase domain protein; oxidoreductase domain-containing protein 3158490 5539938 Rcas_2457 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432555.1 3157339 D 383372 CDS YP_001432556.1 156742427 5539939 3158506..3159672 1 NC_009767.1 PFAM: protein of unknown function DUF993; KEGG: rrs:RoseRS_2854 protein of unknown function DUF993; hypothetical protein 3159672 5539939 Rcas_2458 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432556.1 3158506 D 383372 CDS YP_001432557.1 156742428 5539940 3159676..3160554 1 NC_009767.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_2853 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3160554 5539940 Rcas_2459 Roseiflexus castenholzii DSM 13941 xylose isomerase domain-containing protein YP_001432557.1 3159676 D 383372 CDS YP_001432558.1 156742429 5539941 3160762..3161682 1 NC_009767.1 TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: rrs:RoseRS_2851 PAS/PAC sensor protein; PAS/PAC sensor protein 3161682 5539941 Rcas_2460 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001432558.1 3160762 D 383372 CDS YP_001432559.1 156742430 5539942 3161679..3162824 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2850 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 3162824 5539942 Rcas_2461 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001432559.1 3161679 D 383372 CDS YP_001432560.1 156742431 5539943 3162920..3163216 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: ttj:TTHA1512 nucleotidyltransferase; DNA polymerase subunit beta 3163216 5539943 Rcas_2462 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001432560.1 3162920 D 383372 CDS YP_001432561.1 156742432 5539944 3163295..3163531 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_3558 protein of unknown function DUF86; hypothetical protein 3163531 5539944 Rcas_2463 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432561.1 3163295 D 383372 CDS YP_001432562.1 156742433 5539945 3163572..3164615 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2849 oxidoreductase domain protein; oxidoreductase domain-containing protein 3164615 5539945 Rcas_2464 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432562.1 3163572 D 383372 CDS YP_001432563.1 156742434 5539946 3164612..3165046 1 NC_009767.1 KEGG: rrs:RoseRS_2848 hypothetical protein; hypothetical protein 3165046 5539946 Rcas_2465 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432563.1 3164612 D 383372 CDS YP_001432564.1 156742435 5539947 3165037..3167655 1 NC_009767.1 PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; KEGG: rrs:RoseRS_2847 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 3167655 5539947 Rcas_2466 Roseiflexus castenholzii DSM 13941 polynucleotide adenylyltransferase YP_001432564.1 3165037 D 383372 CDS YP_001432565.1 156742436 5539948 complement(3167709..3169028) 1 NC_009767.1 KEGG: rrs:RoseRS_2846 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein; DNA uptake Rossmann fold nucleotide-binding protein 3169028 5539948 Rcas_2467 Roseiflexus castenholzii DSM 13941 DNA uptake Rossmann fold nucleotide-binding protein YP_001432565.1 3167709 R 383372 CDS YP_001432566.1 156742437 5539949 complement(3169040..3171166) 1 NC_009767.1 KEGG: ana:alr3451 ATP-dependent DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 3171166 5539949 Rcas_2468 Roseiflexus castenholzii DSM 13941 ATP-dependent DNA helicase RecQ YP_001432566.1 3169040 R 383372 CDS YP_001432567.1 156742438 5539950 complement(3171315..3173282) 1 NC_009767.1 KEGG: rrs:RoseRS_2844 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 3173282 5539950 Rcas_2469 Roseiflexus castenholzii DSM 13941 multi-sensor hybrid histidine kinase YP_001432567.1 3171315 R 383372 CDS YP_001432568.1 156742439 5539951 complement(3173335..3175605) 1 NC_009767.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_2842 diguanylate cyclase; GAF sensor-containing diguanylate cyclase 3175605 5539951 Rcas_2470 Roseiflexus castenholzii DSM 13941 GAF sensor-containing diguanylate cyclase YP_001432568.1 3173335 R 383372 CDS YP_001432569.1 156742440 5539952 3175840..3178170 1 NC_009767.1 KEGG: rrs:RoseRS_1099 glycosyl transferase, family 39; hypothetical protein 3178170 5539952 Rcas_2471 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432569.1 3175840 D 383372 CDS YP_001432570.1 156742441 5539953 3178177..3179436 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2841 glycosyl transferase, group 1; group 1 glycosyl transferase 3179436 5539953 Rcas_2472 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432570.1 3178177 D 383372 CDS YP_001432571.1 156742442 5539954 3179441..3180652 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2840 glycosyl transferase, group 1; group 1 glycosyl transferase 3180652 5539954 Rcas_2473 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432571.1 3179441 D 383372 CDS YP_001432572.1 156742443 5539955 complement(3181924..3183510) 1 NC_009767.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rrs:RoseRS_2839 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 3183510 5539955 Rcas_2474 Roseiflexus castenholzii DSM 13941 Orn/DAP/Arg decarboxylase 2 YP_001432572.1 3181924 R 383372 CDS YP_001432573.1 156742444 5539956 complement(3183623..3183877) 1 NC_009767.1 hypothetical protein 3183877 5539956 Rcas_2475 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432573.1 3183623 R 383372 CDS YP_001432574.1 156742445 5539957 complement(3184111..3185577) 1 NC_009767.1 PFAM: glycosyl transferase group 1; Monogalactosyldiacylglycerol synthase; KEGG: rrs:RoseRS_2527 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 3185577 5539957 Rcas_2476 Roseiflexus castenholzii DSM 13941 monogalactosyldiacylglycerol synthase YP_001432574.1 3184111 R 383372 CDS YP_001432575.1 156742446 5539958 complement(3186249..3187400) 1 NC_009767.1 KEGG: rrs:RoseRS_0181 ATPase (AAA+ superfamily)-like protein; ATPase AAA 3187400 5539958 Rcas_2477 Roseiflexus castenholzii DSM 13941 ATPase AAA YP_001432575.1 3186249 R 383372 CDS YP_001432576.1 156742447 5539959 complement(3187446..3190577) 1 NC_009767.1 KEGG: rrs:RoseRS_2542 hypothetical protein; hypothetical protein 3190577 5539959 Rcas_2478 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432576.1 3187446 R 383372 CDS YP_001432577.1 156742448 5539960 3191174..3192106 1 NC_009767.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3192106 5539960 Rcas_2479 Roseiflexus castenholzii DSM 13941 branched-chain amino acid aminotransferase YP_001432577.1 3191174 D 383372 CDS YP_001432578.1 156742449 5539961 3192109..3193266 1 NC_009767.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rrs:RoseRS_2545 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 3193266 5539961 Rcas_2480 Roseiflexus castenholzii DSM 13941 acetyl-CoA acetyltransferase YP_001432578.1 3192109 D 383372 CDS YP_001432579.1 156742450 5539962 complement(3193275..3193892) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0685 protein of unknown function DUF820; hypothetical protein 3193892 5539962 Rcas_2481 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432579.1 3193275 R 383372 CDS YP_001432580.1 156742451 5539963 3194339..3197008 1 NC_009767.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 3197008 5539963 Rcas_2482 Roseiflexus castenholzii DSM 13941 pyruvate phosphate dikinase YP_001432580.1 3194339 D 383372 CDS YP_001432581.1 156742452 5539964 complement(3197790..3199034) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1065 glycosyl transferase, group 1; group 1 glycosyl transferase 3199034 5539964 Rcas_2483 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432581.1 3197790 R 383372 CDS YP_001432582.1 156742453 5539965 3199448..3200632 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1066 major facilitator superfamily MFS_1; major facilitator transporter 3200632 5539965 Rcas_2484 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432582.1 3199448 D 383372 CDS YP_001432583.1 156742454 5539966 complement(3201011..3202318) 1 NC_009767.1 PFAM: protein of unknown function UPF0118; KEGG: rrs:RoseRS_2291 protein of unknown function UPF0118; hypothetical protein 3202318 5539966 Rcas_2485 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432583.1 3201011 R 383372 CDS YP_001432584.1 156742455 5539967 3202404..3203330 1 NC_009767.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rrs:RoseRS_2633 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 3203330 5539967 Rcas_2486 Roseiflexus castenholzii DSM 13941 inosine/uridine-preferring nucleoside hydrolase YP_001432584.1 3202404 D 383372 CDS YP_001432585.1 156742456 5539968 complement(3203343..3204017) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_2290 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3204017 5539968 Rcas_2487 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001432585.1 3203343 R 383372 CDS YP_001432586.1 156742457 5539969 3204124..3204879 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2289 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3204879 5539969 Rcas_2488 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001432586.1 3204124 D 383372 CDS YP_001432587.1 156742458 5539970 3204959..3206020 1 NC_009767.1 PFAM: peptidase M23B; SMART: helix-turn-helix domain protein; KEGG: rrs:RoseRS_2287 peptidase M23B; XRE family transcriptional regulator 3206020 5539970 Rcas_2489 Roseiflexus castenholzii DSM 13941 XRE family transcriptional regulator YP_001432587.1 3204959 D 383372 CDS YP_001432588.1 156742459 5539971 3206250..3207671 1 NC_009767.1 PFAM: amino acid-binding ACT domain protein; malic protein domain protein; malic protein NAD-binding; KEGG: rrs:RoseRS_2286 malate dehydrogenase (oxaloacetate-decarboxylating); malate dehydrogenase 3207671 5539971 Rcas_2490 Roseiflexus castenholzii DSM 13941 malate dehydrogenase YP_001432588.1 3206250 D 383372 CDS YP_001432589.1 156742460 5539972 complement(3207974..3209605) 1 NC_009767.1 KEGG: rrs:RoseRS_2713 hypothetical protein; hypothetical protein 3209605 5539972 Rcas_2491 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432589.1 3207974 R 383372 CDS YP_001432590.1 156742461 5539973 3209914..3210561 1 NC_009767.1 KEGG: rrs:RoseRS_4171 flavodoxin-like protein; flavodoxin-like protein 3210561 5539973 Rcas_2492 Roseiflexus castenholzii DSM 13941 flavodoxin-like protein YP_001432590.1 3209914 D 383372 CDS YP_001432591.1 156742462 5539974 complement(3210643..3213774) 1 NC_009767.1 PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_2714 beta-galactosidase; beta-galactosidase 3213774 5539974 Rcas_2493 Roseiflexus castenholzii DSM 13941 beta-galactosidase YP_001432591.1 3210643 R 383372 CDS YP_001432592.1 156742463 5539975 complement(3213973..3215403) 1 NC_009767.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rrs:RoseRS_2715 glutamine synthetase, catalytic region; glutamine synthetase 3215403 5539975 Rcas_2494 Roseiflexus castenholzii DSM 13941 glutamine synthetase YP_001432592.1 3213973 R 383372 CDS YP_001432593.1 156742464 5539976 3215749..3217455 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rrs:RoseRS_2716 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3217455 5539976 Rcas_2495 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001432593.1 3215749 D 383372 CDS YP_001432594.1 156742465 5539977 3217665..3218819 1 NC_009767.1 KEGG: ava:Ava_2329 hypothetical protein; hypothetical protein 3218819 5539977 Rcas_2496 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432594.1 3217665 D 383372 CDS YP_001432595.1 156742466 5539978 complement(3219035..3220879) 1 NC_009767.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2717 ABC transporter related; ABC transporter-like protein 3220879 5539978 Rcas_2497 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432595.1 3219035 R 383372 CDS YP_001432596.1 156742467 5539979 complement(3220876..3221349) 1 NC_009767.1 KEGG: rrs:RoseRS_2718 hypothetical protein; hypothetical protein 3221349 5539979 Rcas_2498 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432596.1 3220876 R 383372 CDS YP_001432597.1 156742468 5539980 complement(3221406..3223211) 1 NC_009767.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2719 ABC transporter related; ABC transporter transmembrane region 3223211 5539980 Rcas_2499 Roseiflexus castenholzii DSM 13941 ABC transporter transmembrane region YP_001432597.1 3221406 R 383372 CDS YP_001432598.1 156742469 5539981 complement(3223208..3223609) 1 NC_009767.1 PFAM: regulatory protein MarR; KEGG: rrs:RoseRS_2720 transcriptional regulator, MarR family; MarR family transcriptional regulator 3223609 5539981 Rcas_2500 Roseiflexus castenholzii DSM 13941 MarR family transcriptional regulator YP_001432598.1 3223208 R 383372 CDS YP_001432599.1 156742470 5539982 3224019..3224309 1 NC_009767.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rrs:RoseRS_1842 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3224309 5539982 Rcas_2501 Roseiflexus castenholzii DSM 13941 antibiotic biosynthesis monooxygenase YP_001432599.1 3224019 D 383372 CDS YP_001432600.1 156742471 5539984 complement(3224466..3226064) 1 NC_009767.1 KEGG: rrs:RoseRS_1841 hypothetical protein; hypothetical protein 3226064 5539984 Rcas_2502 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432600.1 3224466 R 383372 CDS YP_001432601.1 156742472 5539985 complement(3226382..3228805) 1 NC_009767.1 KEGG: rrs:RoseRS_1840 hypothetical protein; hypothetical protein 3228805 5539985 Rcas_2503 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432601.1 3226382 R 383372 CDS YP_001432602.1 156742473 5539986 complement(3228872..3229639) 1 NC_009767.1 KEGG: rrs:RoseRS_1839 hypothetical protein; hypothetical protein 3229639 5539986 Rcas_2504 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432602.1 3228872 R 383372 CDS YP_001432603.1 156742474 5539987 complement(3229896..3232202) 1 NC_009767.1 KEGG: mxa:MXAN_5387 hypothetical protein; hypothetical protein 3232202 5539987 Rcas_2505 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432603.1 3229896 R 383372 CDS YP_001432604.1 156742475 5539988 complement(3232268..3234394) 1 NC_009767.1 KEGG: rrs:RoseRS_1838 hypothetical protein; hypothetical protein 3234394 5539988 Rcas_2506 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432604.1 3232268 R 383372 CDS YP_001432605.1 156742476 5539989 complement(3234400..3235218) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1837 methyltransferase type 12; type 12 methyltransferase 3235218 5539989 Rcas_2507 Roseiflexus castenholzii DSM 13941 type 12 methyltransferase YP_001432605.1 3234400 R 383372 CDS YP_001432606.1 156742477 5539990 complement(3235482..3236804) 1 NC_009767.1 PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_1836 protein of unknown function DUF58; hypothetical protein 3236804 5539990 Rcas_2508 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432606.1 3235482 R 383372 CDS YP_001432607.1 156742478 5539991 complement(3237675..3238622) 1 NC_009767.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_1835 ATPase associated with various cellular activities, AAA_3; ATPase 3238622 5539991 Rcas_2509 Roseiflexus castenholzii DSM 13941 ATPase YP_001432607.1 3237675 R 383372 CDS YP_001432608.1 156742479 5539992 complement(3238682..3239626) 1 NC_009767.1 KEGG: rrs:RoseRS_1834 hypothetical protein; hypothetical protein 3239626 5539992 Rcas_2510 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432608.1 3238682 R 383372 CDS YP_001432609.1 156742480 5539993 complement(3239648..3240811) 1 NC_009767.1 KEGG: rrs:RoseRS_1833 hypothetical protein; hypothetical protein 3240811 5539993 Rcas_2511 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432609.1 3239648 R 383372 CDS YP_001432610.1 156742481 5539994 complement(3240808..3241794) 1 NC_009767.1 KEGG: rrs:RoseRS_1832 hypothetical protein; hypothetical protein 3241794 5539994 Rcas_2512 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432610.1 3240808 R 383372 CDS YP_001432611.1 156742482 5539995 3242225..3243382 1 NC_009767.1 PFAM: phosphofructokinase; KEGG: rrs:RoseRS_1831 6-phosphofructokinase; 6-phosphofructokinase 3243382 5539995 Rcas_2513 Roseiflexus castenholzii DSM 13941 6-phosphofructokinase YP_001432611.1 3242225 D 383372 CDS YP_001432612.1 156742483 5539996 3243395..3244435 1 NC_009767.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase 3244435 5539996 Rcas_2514 Roseiflexus castenholzii DSM 13941 tagatose 1,6-diphosphate aldolase YP_001432612.1 3243395 D 383372 CDS YP_001432613.1 156742484 5539997 3244679..3245797 1 NC_009767.1 PFAM: phosphofructokinase; KEGG: rrs:RoseRS_1829 6-phosphofructokinase; 6-phosphofructokinase 3245797 5539997 Rcas_2515 Roseiflexus castenholzii DSM 13941 6-phosphofructokinase YP_001432613.1 3244679 D 383372 CDS YP_001432614.1 156742485 5539998 complement(3245835..3247172) 1 NC_009767.1 KEGG: rrs:RoseRS_1828 glycogen debranching enzyme-like protein; glycogen debranching enzyme-like protein 3247172 5539998 Rcas_2516 Roseiflexus castenholzii DSM 13941 glycogen debranching enzyme-like protein YP_001432614.1 3245835 R 383372 CDS YP_001432615.1 156742486 5539999 3247318..3247692 1 NC_009767.1 KEGG: rrs:RoseRS_1827 hypothetical protein; hypothetical protein 3247692 5539999 Rcas_2517 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432615.1 3247318 D 383372 CDS YP_001432616.1 156742487 5540000 3247714..3249108 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_1826 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 3249108 5540000 Rcas_2518 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001432616.1 3247714 D 383372 CDS YP_001432617.1 156742488 5540001 3249795..3250526 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: rrs:RoseRS_1825 alpha/beta hydrolase fold; alpha/beta hydrolase 3250526 5540001 Rcas_2519 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001432617.1 3249795 D 383372 CDS YP_001432618.1 156742489 5540002 3250523..3251887 1 NC_009767.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: ttj:TTHA1060 Mg2+ transporter MgtE; magnesium transporter 3251887 5540002 Rcas_2520 Roseiflexus castenholzii DSM 13941 magnesium transporter YP_001432618.1 3250523 D 383372 CDS YP_001432619.1 156742490 5540003 3252091..3254931 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1823 FHA domain containing protein; FHA domain-containing protein 3254931 5540003 Rcas_2521 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432619.1 3252091 D 383372 CDS YP_001432620.1 156742491 5540004 3255228..3255689 1 NC_009767.1 KEGG: rrs:RoseRS_2555 hypothetical protein; hypothetical protein 3255689 5540004 Rcas_2522 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432620.1 3255228 D 383372 CDS YP_001432621.1 156742492 5540005 3255724..3256482 1 NC_009767.1 PFAM: peptidase C26; KEGG: rrs:RoseRS_1822 peptidase C26; peptidase C26 3256482 5540005 Rcas_2523 Roseiflexus castenholzii DSM 13941 peptidase C26 YP_001432621.1 3255724 D 383372 CDS YP_001432622.1 156742493 5540006 3256770..3257267 1 NC_009767.1 KEGG: rrs:RoseRS_1821 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 3257267 5540006 Rcas_2524 Roseiflexus castenholzii DSM 13941 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001432622.1 3256770 D 383372 CDS YP_001432623.1 156742494 5540007 3257264..3258391 1 NC_009767.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 3258391 5540007 Rcas_2525 Roseiflexus castenholzii DSM 13941 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001432623.1 3257264 D 383372 CDS YP_001432624.1 156742495 5540008 3258524..3260209 1 NC_009767.1 KEGG: rrs:RoseRS_1819 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 3260209 5540008 Rcas_2526 Roseiflexus castenholzii DSM 13941 signal peptide peptidase SppA, 36K type YP_001432624.1 3258524 D 383372 CDS YP_001432625.1 156742496 5540009 3260283..3261164 1 NC_009767.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rrs:RoseRS_1818 thioredoxin; thioredoxin 3261164 5540009 Rcas_2527 Roseiflexus castenholzii DSM 13941 thioredoxin YP_001432625.1 3260283 D 383372 CDS YP_001432626.1 156742497 5540010 3261406..3262059 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1817 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3262059 5540010 Rcas_2528 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432626.1 3261406 D 383372 CDS YP_001432627.1 156742498 5540011 3262077..3263027 1 NC_009767.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rrs:RoseRS_1816 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 3263027 5540011 Rcas_2529 Roseiflexus castenholzii DSM 13941 glycine betaine ABC transporter substrate-binding protein YP_001432627.1 3262077 D 383372 CDS YP_001432628.1 156742499 5540012 3263032..3264012 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1815 ABC transporter related; ABC transporter-like protein 3264012 5540012 Rcas_2530 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432628.1 3263032 D 383372 CDS YP_001432629.1 156742500 5540013 3263996..3264637 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1814 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3264637 5540013 Rcas_2531 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432629.1 3263996 D 383372 CDS YP_001432630.1 156742501 5540015 3265323..3266507 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_1813 alpha/beta hydrolase fold; alpha/beta hydrolase 3266507 5540015 Rcas_2533 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001432630.1 3265323 D 383372 CDS YP_001432631.1 156742502 5540016 complement(3266874..3268412) 1 NC_009767.1 KEGG: rrs:RoseRS_1812 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; glycosyltransferase 3268412 5540016 Rcas_2534 Roseiflexus castenholzii DSM 13941 glycosyltransferase YP_001432631.1 3266874 R 383372 CDS YP_001432632.1 156742503 5540017 3269858..3271333 1 NC_009767.1 TIGRFAM: Zeta-phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_1811 phytoene dehydrogenase-related protein; zeta-phytoene desaturase 3271333 5540017 Rcas_2535 Roseiflexus castenholzii DSM 13941 zeta-phytoene desaturase YP_001432632.1 3269858 D 383372 CDS YP_001432633.1 156742504 5540018 complement(3271810..3272559) 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_1807 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3272559 5540018 Rcas_2536 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001432633.1 3271810 R 383372 CDS YP_001432634.1 156742505 5540019 complement(3272826..3275207) 1 NC_009767.1 PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_1075 protein of unknown function DUF214; hypothetical protein 3275207 5540019 Rcas_2537 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432634.1 3272826 R 383372 CDS YP_001432635.1 156742506 5540020 complement(3275358..3277439) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: rrs:RoseRS_2826 TAP domain protein; TAP domain-containing protein 3277439 5540020 Rcas_2538 Roseiflexus castenholzii DSM 13941 TAP domain-containing protein YP_001432635.1 3275358 R 383372 CDS YP_001432636.1 156742507 5540021 3277577..3278935 1 NC_009767.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_2827 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3278935 5540021 Rcas_2539 Roseiflexus castenholzii DSM 13941 peptidase S8/S53 subtilisin kexin sedolisin YP_001432636.1 3277577 D 383372 CDS YP_001432637.1 156742508 5540022 complement(3279012..3280838) 1 NC_009767.1 KEGG: rrs:RoseRS_2823 magnesium chelatase ATPase subunit D; TIGRFAM: magnesium chelatase ATPase subunit D; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; magnesium chelatase ATPase subunit D 3280838 5540022 Rcas_2540 Roseiflexus castenholzii DSM 13941 magnesium chelatase ATPase subunit D YP_001432637.1 3279012 R 383372 CDS YP_001432638.1 156742509 5540023 complement(3280838..3281581) 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_2822 FHA domain containing protein; FHA domain-containing protein 3281581 5540023 Rcas_2541 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432638.1 3280838 R 383372 CDS YP_001432639.1 156742510 5540024 3281782..3282303 1 NC_009767.1 hypothetical protein 3282303 5540024 Rcas_2542 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432639.1 3281782 D 383372 CDS YP_001432640.1 156742511 5540025 3282665..3283741 1 NC_009767.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: rrs:RoseRS_2821 ParB-like partition protein; parB-like partition protein 3283741 5540025 Rcas_2543 Roseiflexus castenholzii DSM 13941 parB-like partition protein YP_001432640.1 3282665 D 383372 CDS YP_001432641.1 156742512 5540026 complement(3284165..3285064) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2820 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3285064 5540026 Rcas_2544 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432641.1 3284165 R 383372 CDS YP_001432642.1 156742513 5540027 complement(3285107..3286057) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2819 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3286057 5540027 Rcas_2545 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432642.1 3285107 R 383372 CDS YP_001432643.1 156742514 5540028 complement(3286148..3287614) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_2818 extracellular solute-binding protein, family 1; extracellular solute-binding protein 3287614 5540028 Rcas_2546 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001432643.1 3286148 R 383372 CDS YP_001432644.1 156742515 5540029 complement(3287777..3288859) 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: vei:Veis_2277 oxidoreductase domain protein; oxidoreductase domain-containing protein 3288859 5540029 Rcas_2547 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432644.1 3287777 R 383372 CDS YP_001432645.1 156742516 5540030 complement(3288965..3289279) 1 NC_009767.1 KEGG: rrs:RoseRS_2817 hypothetical protein; hypothetical protein 3289279 5540030 Rcas_2548 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432645.1 3288965 R 383372 CDS YP_001432646.1 156742517 5540031 complement(3289284..3289748) 1 NC_009767.1 PFAM: MaoC domain protein dehydratase; KEGG: vei:Veis_2272 MaoC domain protein dehydratase; dehydratase 3289748 5540031 Rcas_2549 Roseiflexus castenholzii DSM 13941 dehydratase YP_001432646.1 3289284 R 383372 CDS YP_001432647.1 156742518 5540032 complement(3289752..3290906) 1 NC_009767.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_2274 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 3290906 5540032 Rcas_2550 Roseiflexus castenholzii DSM 13941 L-carnitine dehydratase/bile acid-inducible protein F YP_001432647.1 3289752 R 383372 CDS YP_001432648.1 156742519 5540034 complement(3291621..3292358) 1 NC_009767.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rrs:RoseRS_2816 transcriptional regulator, GntR family; GntR family transcriptional regulator 3292358 5540034 Rcas_2552 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001432648.1 3291621 R 383372 CDS YP_001432649.1 156742520 5540035 3293036..3294340 1 NC_009767.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rrs:RoseRS_2815 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 3294340 5540035 Rcas_2553 Roseiflexus castenholzii DSM 13941 mandelate racemase/muconate lactonizing protein YP_001432649.1 3293036 D 383372 CDS YP_001432650.1 156742521 5540036 3294633..3296069 1 NC_009767.1 PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: rrs:RoseRS_2814 alpha-L-fucosidase; alpha-L-fucosidase 3296069 5540036 Rcas_2554 Roseiflexus castenholzii DSM 13941 alpha-L-fucosidase YP_001432650.1 3294633 D 383372 CDS YP_001432651.1 156742522 5540037 complement(3296577..3296999) 1 NC_009767.1 PFAM: OsmC family protein; KEGG: rrs:RoseRS_2813 OsmC family protein; OsmC family protein 3296999 5540037 Rcas_2555 Roseiflexus castenholzii DSM 13941 OsmC family protein YP_001432651.1 3296577 R 383372 CDS YP_001432652.1 156742523 5540038 complement(3297185..3298372) 1 NC_009767.1 PFAM: beta-lactamase; KEGG: rrs:RoseRS_2777 beta-lactamase; beta-lactamase 3298372 5540038 Rcas_2556 Roseiflexus castenholzii DSM 13941 beta-lactamase YP_001432652.1 3297185 R 383372 CDS YP_001432653.1 156742524 5540039 complement(3298669..3301077) 1 NC_009767.1 KEGG: rrs:RoseRS_2778 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 3301077 5540039 Rcas_2557 Roseiflexus castenholzii DSM 13941 ATP-dependent protease La YP_001432653.1 3298669 R 383372 CDS YP_001432654.1 156742525 5540040 complement(3301074..3301493) 1 NC_009767.1 KEGG: rrs:RoseRS_2779 molecular chaperone (small heat shock protein)-like protein; molecular chaperone (small heat shock protein)-like protein 3301493 5540040 Rcas_2558 Roseiflexus castenholzii DSM 13941 molecular chaperone (small heat shock protein)-like protein YP_001432654.1 3301074 R 383372 CDS YP_001432655.1 156742526 5540041 complement(3301512..3301742) 1 NC_009767.1 KEGG: tde:TDE0599 PIN domain protein; hypothetical protein 3301742 5540041 Rcas_2559 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432655.1 3301512 R 383372 CDS YP_001432656.1 156742527 5540042 complement(3301925..3302842) 1 NC_009767.1 PFAM: luciferase family protein; KEGG: rrs:RoseRS_2780 luciferase family protein; luciferase family protein 3302842 5540042 Rcas_2560 Roseiflexus castenholzii DSM 13941 luciferase family protein YP_001432656.1 3301925 R 383372 CDS YP_001432657.1 156742528 5540043 3302911..3303261 1 NC_009767.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3303261 rplS 5540043 rplS Roseiflexus castenholzii DSM 13941 50S ribosomal protein L19 YP_001432657.1 3302911 D 383372 CDS YP_001432658.1 156742529 5540044 3303283..3303966 1 NC_009767.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2782 methyltransferase type 11; type 11 methyltransferase 3303966 5540044 Rcas_2562 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001432658.1 3303283 D 383372 CDS YP_001432659.1 156742530 5540045 3303963..3304637 1 NC_009767.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3304637 rnhB 5540045 rnhB Roseiflexus castenholzii DSM 13941 ribonuclease HII YP_001432659.1 3303963 D 383372 CDS YP_001432660.1 156742531 5540046 3304634..3305383 1 NC_009767.1 KEGG: rrs:RoseRS_2784 hypothetical protein; hypothetical protein 3305383 5540046 Rcas_2564 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432660.1 3304634 D 383372 CDS YP_001432661.1 156742532 5540047 3305389..3306435 1 NC_009767.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3306435 5540047 Rcas_2565 Roseiflexus castenholzii DSM 13941 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001432661.1 3305389 D 383372 CDS YP_001432662.1 156742533 5540048 complement(3306565..3307596) 1 NC_009767.1 PFAM: PfkB domain protein; KEGG: rrs:RoseRS_2788 PfkB domain protein; ribokinase-like domain-containing protein 3307596 5540048 Rcas_2566 Roseiflexus castenholzii DSM 13941 ribokinase-like domain-containing protein YP_001432662.1 3306565 R 383372 CDS YP_001432663.1 156742534 5540049 3307709..3308050 1 NC_009767.1 KEGG: rrs:RoseRS_2789 hypothetical protein; hypothetical protein 3308050 5540049 Rcas_2567 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432663.1 3307709 D 383372 CDS YP_001432664.1 156742535 5540050 complement(3308056..3308655) 1 NC_009767.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Tellurite resistance protein TehB; thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2790 methyltransferase type 11; type 11 methyltransferase 3308655 5540050 Rcas_2568 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001432664.1 3308056 R 383372 CDS YP_001432665.1 156742536 5540051 3308790..3309371 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_2791 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3309371 5540051 Rcas_2569 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001432665.1 3308790 D 383372 CDS YP_001432666.1 156742537 5540052 3309390..3309650 1 NC_009767.1 KEGG: rrs:RoseRS_2792 hypothetical protein; hypothetical protein 3309650 5540052 Rcas_2570 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432666.1 3309390 D 383372 CDS YP_001432667.1 156742538 5540053 3309694..3310296 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_2793 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3310296 5540053 Rcas_2571 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001432667.1 3309694 D 383372 CDS YP_001432668.1 156742539 5540054 3310328..3310639 1 NC_009767.1 KEGG: rrs:RoseRS_2794 hypothetical protein; hypothetical protein 3310639 5540054 Rcas_2572 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432668.1 3310328 D 383372 CDS YP_001432669.1 156742540 5540055 3310715..3311017 1 NC_009767.1 KEGG: rrs:RoseRS_2795 hypothetical protein; hypothetical protein 3311017 5540055 Rcas_2573 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432669.1 3310715 D 383372 CDS YP_001432670.1 156742541 5540056 complement(3311719..3323304) 1 NC_009767.1 SMART: LamG domain protein jellyroll fold domain protein; KEGG: ana:alr7304 similar to hlyA; LamG domain-containing protein 3323304 5540056 Rcas_2574 Roseiflexus castenholzii DSM 13941 LamG domain-containing protein YP_001432670.1 3311719 R 383372 CDS YP_001432671.1 156742542 5540057 complement(3323722..3325365) 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2796 von Willebrand factor, type A; von Willebrand factor type A 3325365 5540057 Rcas_2575 Roseiflexus castenholzii DSM 13941 von Willebrand factor type A YP_001432671.1 3323722 R 383372 CDS YP_001432672.1 156742543 5540058 complement(3325607..3326359) 1 NC_009767.1 KEGG: rrs:RoseRS_2798 hypothetical protein; hypothetical protein 3326359 5540058 Rcas_2576 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432672.1 3325607 R 383372 CDS YP_001432673.1 156742544 5540059 complement(3326375..3328063) 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2799 von Willebrand factor, type A; von Willebrand factor type A 3328063 5540059 Rcas_2577 Roseiflexus castenholzii DSM 13941 von Willebrand factor type A YP_001432673.1 3326375 R 383372 CDS YP_001432674.1 156742545 5540060 complement(3328180..3329424) 1 NC_009767.1 KEGG: rrs:RoseRS_2800 hypothetical protein; hypothetical protein 3329424 5540060 Rcas_2578 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432674.1 3328180 R 383372 CDS YP_001432675.1 156742546 5540062 3330434..3331063 1 NC_009767.1 hypothetical protein 3331063 5540062 Rcas_2580 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432675.1 3330434 D 383372 CDS YP_001432676.1 156742547 5540064 complement(3332275..3333363) 1 NC_009767.1 PFAM: RNA methylase; Methyltransferase type 11; KEGG: rrs:RoseRS_2801 RNA methylase; RNA methylase 3333363 5540064 Rcas_2582 Roseiflexus castenholzii DSM 13941 RNA methylase YP_001432676.1 3332275 R 383372 CDS YP_001432677.1 156742548 5540065 complement(3333365..3334594) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3888 major facilitator superfamily MFS_1; major facilitator transporter 3334594 5540065 Rcas_2583 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432677.1 3333365 R 383372 CDS YP_001432678.1 156742549 5540066 3335021..3337807 1 NC_009767.1 KEGG: rrs:RoseRS_2803 chromosome segregation ATPase-like protein; chromosome segregation ATPase-like protein 3337807 5540066 Rcas_2584 Roseiflexus castenholzii DSM 13941 chromosome segregation ATPase-like protein YP_001432678.1 3335021 D 383372 CDS YP_001432679.1 156742550 5540067 complement(3337957..3338376) 1 NC_009767.1 KEGG: rrs:RoseRS_2804 hypothetical protein; hypothetical protein 3338376 5540067 Rcas_2585 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432679.1 3337957 R 383372 CDS YP_001432680.1 156742551 5540068 complement(3338657..3340474) 1 NC_009767.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: rrs:RoseRS_2058 citrate transporter; TrkA domain-containing protein 3340474 5540068 Rcas_2586 Roseiflexus castenholzii DSM 13941 TrkA domain-containing protein YP_001432680.1 3338657 R 383372 CDS YP_001432681.1 156742552 5540069 complement(3340498..3340929) 1 NC_009767.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rme:Rmet_4976 protein of unknown function DUF6, transmembrane; hypothetical protein 3340929 5540069 Rcas_2587 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432681.1 3340498 R 383372 CDS YP_001432682.1 156742553 5540070 complement(3340945..3341463) 1 NC_009767.1 hypothetical protein 3341463 5540070 Rcas_2588 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432682.1 3340945 R 383372 CDS YP_001432683.1 156742554 5540071 complement(3341473..3342519) 1 NC_009767.1 PFAM: protein of unknown function UPF0118; KEGG: ava:Ava_2233 hypothetical protein; hypothetical protein 3342519 5540071 Rcas_2589 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432683.1 3341473 R 383372 CDS YP_001432684.1 156742555 5540072 complement(3342527..3344935) 1 NC_009767.1 KEGG: nha:Nham_0995 glucan 1,4-alpha-glucosidase; TIGRFAM: glucan 1,4-alpha-glucosidase; PFAM: glycoside hydrolase 15-related; Glucodextranase N; glucan 1,4-alpha-glucosidase 3344935 5540072 Rcas_2590 Roseiflexus castenholzii DSM 13941 glucan 1,4-alpha-glucosidase YP_001432684.1 3342527 R 383372 CDS YP_001432685.1 156742556 5540073 complement(3344932..3346044) 1 NC_009767.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_6169 oxidoreductase, zinc-binding dehydrogenase family; alcohol dehydrogenase 3346044 5540073 Rcas_2591 Roseiflexus castenholzii DSM 13941 alcohol dehydrogenase YP_001432685.1 3344932 R 383372 CDS YP_001432686.1 156742557 5540074 complement(3346063..3347355) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: tac:Ta0156 hypothetical protein; major facilitator transporter 3347355 5540074 Rcas_2592 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432686.1 3346063 R 383372 CDS YP_001432687.1 156742558 5540075 complement(3347556..3347732) 1 NC_009767.1 hypothetical protein 3347732 5540075 Rcas_2593 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432687.1 3347556 R 383372 CDS YP_001432688.1 156742559 5540076 3348173..3348736 1 NC_009767.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: dge:Dgeo_2786 propeptide, PepSY amd peptidase M4; peptidase 3348736 5540076 Rcas_2594 Roseiflexus castenholzii DSM 13941 peptidase YP_001432688.1 3348173 D 383372 CDS YP_001432689.1 156742560 5540077 complement(3348938..3349462) 1 NC_009767.1 KEGG: gsu:GSU2763 hypothetical protein; hypothetical protein 3349462 5540077 Rcas_2595 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432689.1 3348938 R 383372 CDS YP_001432690.1 156742561 5540078 complement(3349494..3350237) 1 NC_009767.1 PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_2417 conserved hypothetical protein 374; hypothetical protein 3350237 5540078 Rcas_2596 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432690.1 3349494 R 383372 CDS YP_001432691.1 156742562 5540079 complement(3350264..3350611) 1 NC_009767.1 hypothetical protein 3350611 5540079 Rcas_2597 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432691.1 3350264 R 383372 CDS YP_001432692.1 156742563 5540080 complement(3350611..3352020) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mta:Moth_1477 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3352020 5540080 Rcas_2598 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001432692.1 3350611 R 383372 CDS YP_001432693.1 156742564 5540081 complement(3352007..3352705) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mta:Moth_1478 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3352705 5540081 Rcas_2599 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001432693.1 3352007 R 383372 CDS YP_001432694.1 156742565 5540085 complement(3356496..3356708) 1 NC_009767.1 hypothetical protein 3356708 5540085 Rcas_2603 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432694.1 3356496 R 383372 CDS YP_001432695.1 156742566 5540086 complement(3357153..3363740) 1 NC_009767.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: rrs:RoseRS_2870 alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain-containing protein 3363740 5540086 Rcas_2604 Roseiflexus castenholzii DSM 13941 alpha-2-macroglobulin domain-containing protein YP_001432695.1 3357153 R 383372 CDS YP_001432696.1 156742567 5540087 complement(3364598..3367159) 1 NC_009767.1 KEGG: rrs:RoseRS_2871 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 3367159 5540087 Rcas_2605 Roseiflexus castenholzii DSM 13941 1A family penicillin-binding protein YP_001432696.1 3364598 R 383372 CDS YP_001432697.1 156742568 5540088 3367301..3368134 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2872 metallophosphoesterase; metallophosphoesterase 3368134 5540088 Rcas_2606 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001432697.1 3367301 D 383372 CDS YP_001432698.1 156742569 5540089 complement(3368213..3369013) 1 NC_009767.1 KEGG: rrs:RoseRS_2873 hypothetical protein; hypothetical protein 3369013 5540089 Rcas_2607 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432698.1 3368213 R 383372 CDS YP_001432699.1 156742570 5540090 complement(3369062..3369868) 1 NC_009767.1 KEGG: rrs:RoseRS_2873 hypothetical protein; hypothetical protein 3369868 5540090 Rcas_2608 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432699.1 3369062 R 383372 CDS YP_001432700.1 156742571 5540091 3369926..3370192 1 NC_009767.1 PFAM: protein of unknown function UPF0153; KEGG: rrs:RoseRS_2875 protein of unknown function UPF0153; hypothetical protein 3370192 5540091 Rcas_2609 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432700.1 3369926 D 383372 CDS YP_001432701.1 156742572 5540092 3370208..3370639 1 NC_009767.1 KEGG: rrs:RoseRS_2876 tetratricopeptide TPR_2 repeat protein; hypothetical protein 3370639 5540092 Rcas_2610 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432701.1 3370208 D 383372 CDS YP_001432702.1 156742573 5540093 3370641..3371843 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2877 major facilitator superfamily MFS_1; major facilitator transporter 3371843 5540093 Rcas_2611 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432702.1 3370641 D 383372 CDS YP_001432703.1 156742574 5540094 complement(3372019..3372312) 1 NC_009767.1 KEGG: rrs:RoseRS_2878 hypothetical protein; hypothetical protein 3372312 5540094 Rcas_2612 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432703.1 3372019 R 383372 CDS YP_001432704.1 156742575 5540095 3372575..3372961 1 NC_009767.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_2879 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3372961 5540095 Rcas_2613 Roseiflexus castenholzii DSM 13941 glyoxalase/bleomycin resistance protein/dioxygenase YP_001432704.1 3372575 D 383372 CDS YP_001432705.1 156742576 5540096 3372999..3374162 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2880 oxidoreductase domain protein; oxidoreductase domain-containing protein 3374162 5540096 Rcas_2614 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432705.1 3372999 D 383372 CDS YP_001432706.1 156742577 5540097 3374519..3375517 1 NC_009767.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_2881 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3375517 5540097 Rcas_2615 Roseiflexus castenholzii DSM 13941 xylose isomerase domain-containing protein YP_001432706.1 3374519 D 383372 CDS YP_001432707.1 156742578 5540098 3375539..3376315 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2882 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3376315 5540098 Rcas_2616 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001432707.1 3375539 D 383372 CDS YP_001432708.1 156742579 5540099 3376414..3376836 1 NC_009767.1 KEGG: rrs:RoseRS_2883 hypothetical protein; hypothetical protein 3376836 5540099 Rcas_2617 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432708.1 3376414 D 383372 CDS YP_001432709.1 156742580 5540100 3377070..3378239 1 NC_009767.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 3378239 5540100 Rcas_2618 Roseiflexus castenholzii DSM 13941 xylose isomerase YP_001432709.1 3377070 D 383372 CDS YP_001432710.1 156742581 5540101 3378521..3381517 1 NC_009767.1 PFAM: PKD domain containing protein; KEGG: rrs:RoseRS_2885 PKD domain containing protein; PKD domain-containing protein 3381517 5540101 Rcas_2619 Roseiflexus castenholzii DSM 13941 PKD domain-containing protein YP_001432710.1 3378521 D 383372 CDS YP_001432711.1 156742582 5540102 3381596..3383116 1 NC_009767.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_2886 xylulokinase; xylulokinase 3383116 5540102 Rcas_2620 Roseiflexus castenholzii DSM 13941 xylulokinase YP_001432711.1 3381596 D 383372 CDS YP_001432712.1 156742583 5540103 3383217..3383927 1 NC_009767.1 KEGG: rrs:RoseRS_2887 hypothetical protein; hypothetical protein 3383927 5540103 Rcas_2621 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432712.1 3383217 D 383372 CDS YP_001432713.1 156742584 5540104 complement(3384060..3385211) 1 NC_009767.1 KEGG: rrs:RoseRS_2888 hypothetical protein; hypothetical protein 3385211 5540104 Rcas_2622 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432713.1 3384060 R 383372 CDS YP_001432714.1 156742585 5540105 3385437..3386114 1 NC_009767.1 KEGG: rrs:RoseRS_2889 hypothetical protein; hypothetical protein 3386114 5540105 Rcas_2623 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432714.1 3385437 D 383372 CDS YP_001432715.1 156742586 5540106 complement(3386122..3386346) 1 NC_009767.1 KEGG: rrs:RoseRS_1493 hypothetical protein; hypothetical protein 3386346 5540106 Rcas_2624 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432715.1 3386122 R 383372 CDS YP_001432716.1 156742587 5540107 3386451..3386855 1 NC_009767.1 PFAM: Endoribonuclease L-PSP; KEGG: rrs:RoseRS_1494 endoribonuclease L-PSP; endoribonuclease L-PSP 3386855 5540107 Rcas_2625 Roseiflexus castenholzii DSM 13941 endoribonuclease L-PSP YP_001432716.1 3386451 D 383372 CDS YP_001432717.1 156742588 5540108 complement(3386843..3387442) 1 NC_009767.1 PFAM: ThiJ/PfpI domain protein; KEGG: rrs:RoseRS_1495 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 3387442 5540108 Rcas_2626 Roseiflexus castenholzii DSM 13941 ThiJ/PfpI domain-containing protein YP_001432717.1 3386843 R 383372 CDS YP_001432718.1 156742589 5540109 complement(3387496..3389007) 1 NC_009767.1 PFAM: conserved hypothetical protein; MlrC domain protein; KEGG: gtn:GTNG_2000 hypothetical protein; MlrC domain-containing protein 3389007 5540109 Rcas_2627 Roseiflexus castenholzii DSM 13941 MlrC domain-containing protein YP_001432718.1 3387496 R 383372 CDS YP_001432719.1 156742590 5540110 complement(3389004..3390314) 1 NC_009767.1 PFAM: aminotransferase class-III; KEGG: dsy:DSY2219 hypothetical protein; class III aminotransferase 3390314 5540110 Rcas_2628 Roseiflexus castenholzii DSM 13941 class III aminotransferase YP_001432719.1 3389004 R 383372 CDS YP_001432720.1 156742591 5540111 complement(3390497..3391120) 1 NC_009767.1 KEGG: rde:RD1_0666 oxidoreductase; hypothetical protein 3391120 5540111 Rcas_2629 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432720.1 3390497 R 383372 CDS YP_001432721.1 156742592 5540112 complement(3391861..3392439) 1 NC_009767.1 KEGG: rrs:RoseRS_1496 hypothetical protein; hypothetical protein 3392439 5540112 Rcas_2630 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432721.1 3391861 R 383372 CDS YP_001432722.1 156742593 5540113 complement(3392752..3393195) 1 NC_009767.1 PFAM: cytochrome c class I; KEGG: rrs:RoseRS_1498 cytochrome c, class I; cytochrome c class I 3393195 5540113 Rcas_2631 Roseiflexus castenholzii DSM 13941 cytochrome c class I YP_001432722.1 3392752 R 383372 CDS YP_001432723.1 156742594 5540114 complement(3393310..3393771) 1 NC_009767.1 KEGG: rrs:RoseRS_1499 hypothetical protein; hypothetical protein 3393771 5540114 Rcas_2632 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432723.1 3393310 R 383372 CDS YP_001432724.1 156742595 5540115 complement(3393910..3395751) 1 NC_009767.1 PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: rrs:RoseRS_1500 copper resistance protein CopC; copper resistance protein CopC 3395751 5540115 Rcas_2633 Roseiflexus castenholzii DSM 13941 copper resistance protein CopC YP_001432724.1 3393910 R 383372 CDS YP_001432725.1 156742596 5540116 complement(3396145..3396666) 1 NC_009767.1 PFAM: copper resistance protein CopC; KEGG: rrs:RoseRS_1501 copper resistance protein CopC; copper resistance protein CopC 3396666 5540116 Rcas_2634 Roseiflexus castenholzii DSM 13941 copper resistance protein CopC YP_001432725.1 3396145 R 383372 CDS YP_001432726.1 156742597 5540117 complement(3396991..3397479) 1 NC_009767.1 KEGG: rrs:RoseRS_1502 hypothetical protein; hypothetical protein 3397479 5540117 Rcas_2635 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432726.1 3396991 R 383372 CDS YP_001432727.1 156742598 5540118 complement(3397746..3398456) 1 NC_009767.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: rrs:RoseRS_1504 ferric reductase domain protein transmembrane component, N-terminal domain; ferric reductase domain-containing protein 3398456 5540118 Rcas_2636 Roseiflexus castenholzii DSM 13941 ferric reductase domain-containing protein YP_001432727.1 3397746 R 383372 CDS YP_001432728.1 156742599 5540119 complement(3398475..3399110) 1 NC_009767.1 KEGG: rrs:RoseRS_3065 hypothetical protein; hypothetical protein 3399110 5540119 Rcas_2637 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432728.1 3398475 R 383372 CDS YP_001432729.1 156742600 5540120 complement(3399542..3400405) 1 NC_009767.1 KEGG: rrs:RoseRS_1581 rhamnulose-1-phosphate aldolase; rhamnulose-1-phosphate aldolase 3400405 5540120 Rcas_2638 Roseiflexus castenholzii DSM 13941 rhamnulose-1-phosphate aldolase YP_001432729.1 3399542 R 383372 CDS YP_001432730.1 156742601 5540121 3400646..3402571 1 NC_009767.1 KEGG: rrs:RoseRS_2402 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 3402571 5540121 Rcas_2639 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001432730.1 3400646 D 383372 CDS YP_001432731.1 156742602 5540123 3403522..3405582 1 NC_009767.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: rrs:RoseRS_1579 oligopeptidase B; oligopeptidase B 3405582 5540123 Rcas_2641 Roseiflexus castenholzii DSM 13941 oligopeptidase B YP_001432731.1 3403522 D 383372 CDS YP_001432732.1 156742603 5540124 complement(3405794..3406516) 1 NC_009767.1 KEGG: rrs:RoseRS_1578 hypothetical protein; hypothetical protein 3406516 5540124 Rcas_2642 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432732.1 3405794 R 383372 CDS YP_001432733.1 156742604 5540125 3406755..3407165 1 NC_009767.1 KEGG: rrs:RoseRS_1577 hypothetical protein; hypothetical protein 3407165 5540125 Rcas_2643 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432733.1 3406755 D 383372 CDS YP_001432734.1 156742605 5540126 3407373..3409874 1 NC_009767.1 PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_1576 beta-mannosidase; beta-mannosidase 3409874 5540126 Rcas_2644 Roseiflexus castenholzii DSM 13941 beta-mannosidase YP_001432734.1 3407373 D 383372 CDS YP_001432735.1 156742606 5540127 complement(3409884..3411434) 1 NC_009767.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 3411434 5540127 Rcas_2645 Roseiflexus castenholzii DSM 13941 4-alpha-glucanotransferase YP_001432735.1 3409884 R 383372 CDS YP_001432736.1 156742607 5540128 complement(3411624..3412055) 1 NC_009767.1 KEGG: rrs:RoseRS_1573 hypothetical protein; hypothetical protein 3412055 5540128 Rcas_2646 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432736.1 3411624 R 383372 CDS YP_001432737.1 156742608 5540129 complement(3412374..3413948) 1 NC_009767.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1572 major facilitator superfamily MFS_1; major facilitator transporter 3413948 5540129 Rcas_2647 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432737.1 3412374 R 383372 CDS YP_001432738.1 156742609 5540130 3415142..3415453 1 NC_009767.1 KEGG: rrs:RoseRS_1571 hypothetical protein; hypothetical protein 3415453 5540130 Rcas_2648 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432738.1 3415142 D 383372 CDS YP_001432739.1 156742610 5540131 3415716..3416363 1 NC_009767.1 KEGG: rrs:RoseRS_1570 hypothetical protein; hypothetical protein 3416363 5540131 Rcas_2649 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432739.1 3415716 D 383372 CDS YP_001432740.1 156742611 5540132 3416443..3417504 1 NC_009767.1 KEGG: rrs:RoseRS_1569 hypothetical protein; hypothetical protein 3417504 5540132 Rcas_2650 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432740.1 3416443 D 383372 CDS YP_001432741.1 156742612 5540133 3417501..3417740 1 NC_009767.1 KEGG: rrs:RoseRS_1568 hypothetical protein; hypothetical protein 3417740 5540133 Rcas_2651 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432741.1 3417501 D 383372 CDS YP_001432742.1 156742613 5540134 3417756..3419069 1 NC_009767.1 KEGG: rrs:RoseRS_1567 hypothetical protein; hypothetical protein 3419069 5540134 Rcas_2652 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432742.1 3417756 D 383372 CDS YP_001432743.1 156742614 5540135 complement(3419143..3420861) 1 NC_009767.1 PFAM: transcriptional activator domain; KEGG: rrs:RoseRS_1512 response regulator receiver and SARP domain protein; response regulator receiver/SARP domain-containing protein 3420861 5540135 Rcas_2653 Roseiflexus castenholzii DSM 13941 response regulator receiver/SARP domain-containing protein YP_001432743.1 3419143 R 383372 CDS YP_001432744.1 156742615 5540136 complement(3421599..3422588) 1 NC_009767.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: rrs:RoseRS_1509 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 3422588 5540136 Rcas_2654 Roseiflexus castenholzii DSM 13941 UDP-glucose 4-epimerase YP_001432744.1 3421599 R 383372 CDS YP_001432745.1 156742616 5540137 3423305..3423736 1 NC_009767.1 KEGG: rrs:RoseRS_1508 hypothetical protein; hypothetical protein 3423736 5540137 Rcas_2655 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432745.1 3423305 D 383372 CDS YP_001432746.1 156742617 5540138 complement(3423728..3425095) 1 NC_009767.1 KEGG: rrs:RoseRS_1507 hypothetical protein; hypothetical protein 3425095 5540138 Rcas_2656 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432746.1 3423728 R 383372 CDS YP_001432747.1 156742618 5540139 3425402..3426331 1 NC_009767.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_1506 cysteine synthase A; cysteine synthase A 3426331 5540139 Rcas_2657 Roseiflexus castenholzii DSM 13941 cysteine synthase A YP_001432747.1 3425402 D 383372 CDS YP_001432748.1 156742619 5540140 3426580..3427515 1 NC_009767.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 3427515 5540140 Rcas_2658 Roseiflexus castenholzii DSM 13941 sulfite oxidase subunit YedY YP_001432748.1 3426580 D 383372 CDS YP_001432749.1 156742620 5540141 3427714..3430518 1 NC_009767.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_3064 ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAD superfamily ATPase 3430518 5540141 Rcas_2659 Roseiflexus castenholzii DSM 13941 HAD superfamily ATPase YP_001432749.1 3427714 D 383372 CDS YP_001432750.1 156742621 5540142 3430542..3431186 1 NC_009767.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rrs:RoseRS_3063 TrkA-N domain protein; TrkA domain-containing protein 3431186 5540142 Rcas_2660 Roseiflexus castenholzii DSM 13941 TrkA domain-containing protein YP_001432750.1 3430542 D 383372 CDS YP_001432751.1 156742622 5540143 3431191..3431853 1 NC_009767.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rrs:RoseRS_3062 TrkA-N domain protein; TrkA domain-containing protein 3431853 5540143 Rcas_2661 Roseiflexus castenholzii DSM 13941 TrkA domain-containing protein YP_001432751.1 3431191 D 383372 CDS YP_001432752.1 156742623 5540145 3432333..3434471 1 NC_009767.1 KEGG: rrs:RoseRS_3061 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 3434471 5540145 Rcas_2663 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001432752.1 3432333 D 383372 CDS YP_001432753.1 156742624 5540146 3434437..3434880 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3060 response regulator receiver protein; response regulator receiver protein 3434880 5540146 Rcas_2664 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001432753.1 3434437 D 383372 CDS YP_001432754.1 156742625 5540147 3434895..3436808 1 NC_009767.1 KEGG: rrs:RoseRS_3059 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 3436808 5540147 Rcas_2665 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor hybrid histidine kinase YP_001432754.1 3434895 D 383372 CDS YP_001432755.1 156742626 5540148 3437135..3438253 1 NC_009767.1 KEGG: rrs:RoseRS_3058 ABC-type sugar transport system periplasmic component-like protein; sugar ABC transporter periplasmic component-like protein 3438253 5540148 Rcas_2666 Roseiflexus castenholzii DSM 13941 sugar ABC transporter periplasmic component-like protein YP_001432755.1 3437135 D 383372 CDS YP_001432756.1 156742627 5540149 3438258..3439775 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3057 ABC transporter related; ABC transporter-like protein 3439775 5540149 Rcas_2667 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432756.1 3438258 D 383372 CDS YP_001432757.1 156742628 5540150 3439772..3440740 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_3056 monosaccharide-transporting ATPase; monosaccharide-transporting ATPase 3440740 5540150 Rcas_2668 Roseiflexus castenholzii DSM 13941 monosaccharide-transporting ATPase YP_001432757.1 3439772 D 383372 CDS YP_001432758.1 156742629 5540151 3440737..3441699 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_3055 inner-membrane translocator; inner-membrane translocator 3441699 5540151 Rcas_2669 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001432758.1 3440737 D 383372 CDS YP_001432759.1 156742630 5540152 3441820..3443862 1 NC_009767.1 KEGG: rrs:RoseRS_3054 hypothetical protein; hypothetical protein 3443862 5540152 Rcas_2670 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432759.1 3441820 D 383372 CDS YP_001432760.1 156742631 5540153 3443934..3446312 1 NC_009767.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: rrs:RoseRS_3053 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 3446312 5540153 Rcas_2671 Roseiflexus castenholzii DSM 13941 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001432760.1 3443934 D 383372 CDS YP_001432761.1 156742632 5540154 3446331..3447101 1 NC_009767.1 KEGG: rrs:RoseRS_3052 hypothetical protein; hypothetical protein 3447101 5540154 Rcas_2672 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432761.1 3446331 D 383372 CDS YP_001432762.1 156742633 5540155 3453182..3455278 1 NC_009767.1 KEGG: rrs:RoseRS_2546 hypothetical protein; hypothetical protein 3455278 5540155 Rcas_2673 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432762.1 3453182 D 383372 CDS YP_001432763.1 156742634 5540156 complement(3455478..3455753) 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: rrs:RoseRS_3010 CRISPR-associated protein Cas2; CRISPR-associated Cas2 family protein 3455753 5540156 Rcas_2674 Roseiflexus castenholzii DSM 13941 CRISPR-associated Cas2 family protein YP_001432763.1 3455478 R 383372 CDS YP_001432764.1 156742635 5540157 complement(3455933..3458266) 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_3011 von Willebrand factor, type A; von Willebrand factor type A 3458266 5540157 Rcas_2675 Roseiflexus castenholzii DSM 13941 von Willebrand factor type A YP_001432764.1 3455933 R 383372 CDS YP_001432765.1 156742636 5540158 complement(3458387..3459385) 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: rrs:RoseRS_3012 CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein 3459385 5540158 Rcas_2676 Roseiflexus castenholzii DSM 13941 CRISPR-associated Cas1 family protein YP_001432765.1 3458387 R 383372 CDS YP_001432766.1 156742637 5540159 complement(3459724..3461067) 1 NC_009767.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: rrs:RoseRS_3013 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 3461067 5540159 Rcas_2677 Roseiflexus castenholzii DSM 13941 RNA-directed DNA polymerase YP_001432766.1 3459724 R 383372 CDS YP_001432767.1 156742638 5540160 complement(3461083..3462543) 1 NC_009767.1 KEGG: lma:LmjF27.0240 kinetoplast-associated protein-like protein; hypothetical protein 3462543 5540160 Rcas_2678 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432767.1 3461083 R 383372 CDS YP_001432768.1 156742639 5540161 complement(3462558..3463007) 1 NC_009767.1 KEGG: rrs:RoseRS_3014 hypothetical protein; hypothetical protein 3463007 5540161 Rcas_2679 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432768.1 3462558 R 383372 CDS YP_001432769.1 156742640 5540162 complement(3463004..3463192) 1 NC_009767.1 hypothetical protein 3463192 5540162 Rcas_2680 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432769.1 3463004 R 383372 CDS YP_001432770.1 156742641 5540163 complement(3463969..3464346) 1 NC_009767.1 KEGG: rrs:RoseRS_3018 hypothetical protein; hypothetical protein 3464346 5540163 Rcas_2681 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432770.1 3463969 R 383372 CDS YP_001432771.1 156742642 5540164 complement(3464343..3465086) 1 NC_009767.1 KEGG: rrs:RoseRS_3019 hypothetical protein; hypothetical protein 3465086 5540164 Rcas_2682 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432771.1 3464343 R 383372 CDS YP_001432772.1 156742643 5540165 complement(3465083..3466129) 1 NC_009767.1 KEGG: rrs:RoseRS_3020 transcriptional regulator-like protein; transcriptional regulator-like protein 3466129 5540165 Rcas_2683 Roseiflexus castenholzii DSM 13941 transcriptional regulator-like protein YP_001432772.1 3465083 R 383372 CDS YP_001432773.1 156742644 5540166 complement(3466291..3467688) 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Cas02710; KEGG: rrs:RoseRS_3021 hypothetical protein; CRISPR-associated protein 3467688 5540166 Rcas_2684 Roseiflexus castenholzii DSM 13941 CRISPR-associated protein YP_001432773.1 3466291 R 383372 CDS YP_001432774.1 156742645 5540167 complement(3467895..3468467) 1 NC_009767.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rrs:RoseRS_2500 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase 3468467 5540167 Rcas_2685 Roseiflexus castenholzii DSM 13941 CMP/dCMP deaminase YP_001432774.1 3467895 R 383372 CDS YP_001432775.1 156742646 5540168 3469717..3470457 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_2979 methyltransferase type 12; type 12 methyltransferase 3470457 5540168 Rcas_2686 Roseiflexus castenholzii DSM 13941 type 12 methyltransferase YP_001432775.1 3469717 D 383372 CDS YP_001432776.1 156742647 5540169 complement(3470461..3471210) 1 NC_009767.1 KEGG: rrs:RoseRS_2501 hypothetical protein; hypothetical protein 3471210 5540169 Rcas_2687 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432776.1 3470461 R 383372 CDS YP_001432777.1 156742648 5540170 complement(3471207..3472370) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2502 glycosyl transferase, group 1; group 1 glycosyl transferase 3472370 5540170 Rcas_2688 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432777.1 3471207 R 383372 CDS YP_001432778.1 156742649 5540171 complement(3472416..3473360) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2503 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3473360 5540171 Rcas_2689 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001432778.1 3472416 R 383372 CDS YP_001432779.1 156742650 5540172 3473526..3475928 1 NC_009767.1 PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2641 lytic transglycosylase, catalytic; lytic transglycosylase catalytic 3475928 5540172 Rcas_2690 Roseiflexus castenholzii DSM 13941 lytic transglycosylase catalytic YP_001432779.1 3473526 D 383372 CDS YP_001432780.1 156742651 5540173 complement(3475929..3476210) 1 NC_009767.1 KEGG: rrs:RoseRS_2642 hypothetical protein; hypothetical protein 3476210 5540173 Rcas_2691 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432780.1 3475929 R 383372 CDS YP_001432781.1 156742652 5540174 complement(3476267..3477121) 1 NC_009767.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_1229 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3477121 5540174 Rcas_2692 Roseiflexus castenholzii DSM 13941 xylose isomerase domain-containing protein YP_001432781.1 3476267 R 383372 CDS YP_001432782.1 156742653 5540175 complement(3477246..3478511) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1230 glycosyl transferase, group 1; group 1 glycosyl transferase 3478511 5540175 Rcas_2693 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432782.1 3477246 R 383372 CDS YP_001432783.1 156742654 5540176 complement(3478839..3479672) 1 NC_009767.1 KEGG: rrs:RoseRS_1231 hypothetical protein; hypothetical protein 3479672 5540176 Rcas_2694 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432783.1 3478839 R 383372 CDS YP_001432784.1 156742655 5540177 complement(3479669..3480235) 1 NC_009767.1 PFAM: protein of unknown function DUF123; KEGG: rrs:RoseRS_1232 protein of unknown function DUF123; hypothetical protein 3480235 5540177 Rcas_2695 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432784.1 3479669 R 383372 CDS YP_001432785.1 156742656 5540178 complement(3480715..3482694) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1233 ABC transporter related; ABC transporter-like protein 3482694 5540178 Rcas_2696 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432785.1 3480715 R 383372 CDS YP_001432786.1 156742657 5540179 3482768..3483403 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1234 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3483403 5540179 Rcas_2697 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001432786.1 3482768 D 383372 CDS YP_001432787.1 156742658 5540180 3483400..3484545 1 NC_009767.1 KEGG: rrs:RoseRS_1235 transmembrane anti-sigma factor; transmembrane anti-sigma factor 3484545 5540180 Rcas_2698 Roseiflexus castenholzii DSM 13941 transmembrane anti-sigma factor YP_001432787.1 3483400 D 383372 CDS YP_001432788.1 156742659 5540181 3484929..3485861 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1236 ABC transporter related; ABC transporter-like protein 3485861 5540181 Rcas_2699 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432788.1 3484929 D 383372 CDS YP_001432789.1 156742660 5540182 3486120..3487028 1 NC_009767.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rrs:RoseRS_1237 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 3487028 5540182 Rcas_2700 Roseiflexus castenholzii DSM 13941 3-hydroxyisobutyrate dehydrogenase YP_001432789.1 3486120 D 383372 CDS YP_001432790.1 156742661 5540183 3487025..3487939 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_1238 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3487939 5540183 Rcas_2701 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001432790.1 3487025 D 383372 CDS YP_001432791.1 156742662 5540184 3487946..3488458 1 NC_009767.1 KEGG: rrs:RoseRS_1239 hypothetical protein; hypothetical protein 3488458 5540184 Rcas_2702 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432791.1 3487946 D 383372 CDS YP_001432792.1 156742663 5540185 complement(3488597..3491197) 1 NC_009767.1 KEGG: rrs:RoseRS_1240 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; primosomal protein N' 3491197 5540185 Rcas_2703 Roseiflexus castenholzii DSM 13941 primosomal protein N' YP_001432792.1 3488597 R 383372 CDS YP_001432793.1 156742664 5540186 complement(3491963..3492673) 1 NC_009767.1 KEGG: rrs:RoseRS_3218 hypothetical protein; hypothetical protein 3492673 5540186 Rcas_2704 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432793.1 3491963 R 383372 CDS YP_001432794.1 156742665 5540190 complement(3493209..3493697) 1 NC_009767.1 KEGG: rrs:RoseRS_3217 hypothetical protein; hypothetical protein 3493697 5540190 Rcas_2705 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432794.1 3493209 R 383372 CDS YP_001432795.1 156742666 5540191 complement(3493843..3494505) 1 NC_009767.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3494505 5540191 Rcas_2706 Roseiflexus castenholzii DSM 13941 deoxyribose-phosphate aldolase YP_001432795.1 3493843 R 383372 CDS YP_001432796.1 156742667 5540192 complement(3494706..3495971) 1 NC_009767.1 KEGG: rrs:RoseRS_3215 hypothetical protein; hypothetical protein 3495971 5540192 Rcas_2707 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432796.1 3494706 R 383372 CDS YP_001432797.1 156742668 5540193 complement(3495983..3496306) 1 NC_009767.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_3214 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 3496306 5540193 Rcas_2708 Roseiflexus castenholzii DSM 13941 Rieske (2Fe-2S) domain-containing protein YP_001432797.1 3495983 R 383372 CDS YP_001432798.1 156742669 5540195 complement(3496571..3498076) 1 NC_009767.1 KEGG: rrs:RoseRS_3213 multidrug resistance efflux pump-like protein; multidrug resistance efflux pump-like protein 3498076 5540195 Rcas_2709 Roseiflexus castenholzii DSM 13941 multidrug resistance efflux pump-like protein YP_001432798.1 3496571 R 383372 CDS YP_001432799.1 156742670 5540196 complement(3498116..3499282) 1 NC_009767.1 PFAM: cyclic nucleotide-binding; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3212 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 3499282 5540196 Rcas_2710 Roseiflexus castenholzii DSM 13941 cyclic nucleotide-binding protein YP_001432799.1 3498116 R 383372 CDS YP_001432800.1 156742671 5540197 complement(3499515..3500756) 1 NC_009767.1 KEGG: rrs:RoseRS_2643 lycopene cyclase family protein; TIGRFAM: lycopene cyclase family protein; PFAM: FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; lycopene cyclase family protein 3500756 5540197 Rcas_2711 Roseiflexus castenholzii DSM 13941 lycopene cyclase family protein YP_001432800.1 3499515 R 383372 CDS YP_001432801.1 156742672 5540198 complement(3500753..3501853) 1 NC_009767.1 PFAM: peptidase M29 aminopeptidase II; KEGG: rrs:RoseRS_2644 peptidase M29, aminopeptidase II; peptidase M29 aminopeptidase II 3501853 5540198 Rcas_2712 Roseiflexus castenholzii DSM 13941 peptidase M29 aminopeptidase II YP_001432801.1 3500753 R 383372 CDS YP_001432802.1 156742673 5540199 complement(3501846..3502871) 1 NC_009767.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: rrs:RoseRS_2645 protein of unknown function UPF0052 and CofD; hypothetical protein 3502871 5540199 Rcas_2713 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432802.1 3501846 R 383372 CDS YP_001432803.1 156742674 5540200 complement(3503143..3503523) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2635 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3503523 5540200 Rcas_2714 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001432803.1 3503143 R 383372 CDS YP_001432804.1 156742675 5540201 complement(3503797..3504822) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2646 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3504822 5540201 Rcas_2715 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001432804.1 3503797 R 383372 CDS YP_001432805.1 156742676 5540202 3505039..3506013 1 NC_009767.1 KEGG: rrs:RoseRS_2648 hypothetical protein; hypothetical protein 3506013 5540202 Rcas_2716 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432805.1 3505039 D 383372 CDS YP_001432806.1 156742677 5540203 complement(3506143..3507516) 1 NC_009767.1 KEGG: rrs:RoseRS_2649 hypothetical protein; hypothetical protein 3507516 5540203 Rcas_2717 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432806.1 3506143 R 383372 CDS YP_001432807.1 156742678 5540204 complement(3507541..3508731) 1 NC_009767.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: rrs:RoseRS_2650 hypothetical protein; hypothetical protein 3508731 5540204 Rcas_2718 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432807.1 3507541 R 383372 CDS YP_001432808.1 156742679 5540205 complement(3508760..3509866) 1 NC_009767.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: rrs:RoseRS_2651 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 3509866 5540205 Rcas_2719 Roseiflexus castenholzii DSM 13941 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_001432808.1 3508760 R 383372 CDS YP_001432809.1 156742680 5540206 complement(3509905..3511311) 1 NC_009767.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rrs:RoseRS_2652 phosphomannomutase; phosphomannomutase 3511311 5540206 Rcas_2720 Roseiflexus castenholzii DSM 13941 phosphomannomutase YP_001432809.1 3509905 R 383372 CDS YP_001432810.1 156742681 5540207 complement(3511615..3512478) 1 NC_009767.1 PFAM: protein of unknown function DUF81; KEGG: rsq:Rsph17025_4316 hypothetical protein; hypothetical protein 3512478 5540207 Rcas_2721 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432810.1 3511615 R 383372 CDS YP_001432811.1 156742682 5540208 complement(3514300..3515793) 1 NC_009767.1 PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_2653 O-antigen polymerase; O-antigen polymerase 3515793 5540208 Rcas_2722 Roseiflexus castenholzii DSM 13941 O-antigen polymerase YP_001432811.1 3514300 R 383372 CDS YP_001432812.1 156742683 5540209 complement(3515832..3517484) 1 NC_009767.1 KEGG: rrs:RoseRS_2654 hypothetical protein; hypothetical protein 3517484 5540209 Rcas_2723 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432812.1 3515832 R 383372 CDS YP_001432813.1 156742684 5540210 3518263..3520746 1 NC_009767.1 KEGG: rrs:RoseRS_2656 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 3520746 5540210 Rcas_2724 Roseiflexus castenholzii DSM 13941 multi-sensor hybrid histidine kinase YP_001432813.1 3518263 D 383372 CDS YP_001432814.1 156742685 5540211 3520769..3523117 1 NC_009767.1 KEGG: rrs:RoseRS_2657 hypothetical protein; hypothetical protein 3523117 5540211 Rcas_2725 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432814.1 3520769 D 383372 CDS YP_001432815.1 156742686 5540212 3523177..3525240 1 NC_009767.1 PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_2658 glycosyl transferase, family 39; hypothetical protein 3525240 5540212 Rcas_2726 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432815.1 3523177 D 383372 CDS YP_001432816.1 156742687 5540213 3525212..3527401 1 NC_009767.1 PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_2659 glycosyl transferase, family 39; glycosyl transferase family protein 3527401 5540213 Rcas_2727 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001432816.1 3525212 D 383372 CDS YP_001432817.1 156742688 5540214 3528038..3528511 1 NC_009767.1 KEGG: rrs:RoseRS_4066 hypothetical protein; hypothetical protein 3528511 5540214 Rcas_2728 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432817.1 3528038 D 383372 CDS YP_001432818.1 156742689 5540215 complement(3529089..3529307) 1 NC_009767.1 KEGG: rrs:RoseRS_2661 hypothetical protein; hypothetical protein 3529307 5540215 Rcas_2729 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432818.1 3529089 R 383372 CDS YP_001432819.1 156742690 5540216 complement(3529338..3533627) 1 NC_009767.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2662 adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing adenylate/guanylate cyclase 3533627 5540216 Rcas_2730 Roseiflexus castenholzii DSM 13941 TPR repeat-containing adenylate/guanylate cyclase YP_001432819.1 3529338 R 383372 CDS YP_001432820.1 156742691 5540217 complement(3533703..3535214) 1 NC_009767.1 KEGG: rrs:RoseRS_2663 hypothetical protein; hypothetical protein 3535214 5540217 Rcas_2731 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432820.1 3533703 R 383372 CDS YP_001432821.1 156742692 5540218 complement(3535244..3535546) 1 NC_009767.1 SMART: regulatory protein ArsR; KEGG: rrs:RoseRS_2664 regulatory protein, ArsR; ArsR family transcriptional regulator 3535546 5540218 Rcas_2732 Roseiflexus castenholzii DSM 13941 ArsR family transcriptional regulator YP_001432821.1 3535244 R 383372 CDS YP_001432822.1 156742693 5540219 complement(3535946..3536707) 1 NC_009767.1 KEGG: rrs:RoseRS_2665 hypothetical protein; hypothetical protein 3536707 5540219 Rcas_2733 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432822.1 3535946 R 383372 CDS YP_001432823.1 156742694 5540220 complement(3536704..3537729) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2666 ABC transporter related; ABC transporter-like protein 3537729 5540220 Rcas_2734 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001432823.1 3536704 R 383372 CDS YP_001432824.1 156742695 5540221 complement(3537793..3538641) 1 NC_009767.1 KEGG: rrs:RoseRS_2667 hypothetical protein; hypothetical protein 3538641 5540221 Rcas_2735 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432824.1 3537793 R 383372 CDS YP_001432825.1 156742696 5540222 complement(3538669..3539046) 1 NC_009767.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rrs:RoseRS_2668 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 3539046 5540222 Rcas_2736 Roseiflexus castenholzii DSM 13941 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001432825.1 3538669 R 383372 CDS YP_001432826.1 156742697 5540223 complement(3539112..3540566) 1 NC_009767.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_2669 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone (complex I) 3540566 5540223 Rcas_2737 Roseiflexus castenholzii DSM 13941 NADH/ubiquinone/plastoquinone (complex I) YP_001432826.1 3539112 R 383372 CDS YP_001432827.1 156742698 5540224 complement(3540615..3541334) 1 NC_009767.1 KEGG: rrs:RoseRS_2670 hypothetical protein; hypothetical protein 3541334 5540224 Rcas_2738 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432827.1 3540615 R 383372 CDS YP_001432828.1 156742699 5540225 complement(3541338..3543062) 1 NC_009767.1 KEGG: rrs:RoseRS_2671 hypothetical protein; hypothetical protein 3543062 5540225 Rcas_2739 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432828.1 3541338 R 383372 CDS YP_001432829.1 156742700 5540226 complement(3543070..3544146) 1 NC_009767.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: rrs:RoseRS_2672 NADH-ubiquinone oxidoreductase, chain 49kDa; NADH-ubiquinone oxidoreductase chain 49kDa 3544146 5540226 Rcas_2740 Roseiflexus castenholzii DSM 13941 NADH-ubiquinone oxidoreductase chain 49kDa YP_001432829.1 3543070 R 383372 CDS YP_001432830.1 156742701 5540227 complement(3544478..3544855) 1 NC_009767.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_2673 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3544855 5540227 Rcas_2741 Roseiflexus castenholzii DSM 13941 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001432830.1 3544478 R 383372 CDS YP_001432831.1 156742702 5540228 complement(3545181..3546797) 1 NC_009767.1 KEGG: rrs:RoseRS_2674 AAA ATPase; ATPase AAA 3546797 5540228 Rcas_2742 Roseiflexus castenholzii DSM 13941 ATPase AAA YP_001432831.1 3545181 R 383372 CDS YP_001432832.1 156742703 5540229 3547043..3547915 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2675 hypothetical protein; type 12 methyltransferase 3547915 5540229 Rcas_2743 Roseiflexus castenholzii DSM 13941 type 12 methyltransferase YP_001432832.1 3547043 D 383372 CDS YP_001432833.1 156742704 5540230 3547932..3549638 1 NC_009767.1 KEGG: rrs:RoseRS_2676 glycosyl transferase, group 1; group 1 glycosyl transferase 3549638 5540230 Rcas_2744 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432833.1 3547932 D 383372 CDS YP_001432834.1 156742705 5540231 3549631..3553434 1 NC_009767.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: rrs:RoseRS_2677 glycosyl transferase, family 2; glycosyl transferase family protein 3553434 5540231 Rcas_2745 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001432834.1 3549631 D 383372 CDS YP_001432835.1 156742706 5540232 complement(3553831..3554361) 1 NC_009767.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2678 phosphodiesterase, MJ0936 family; phosphodiesterase 3554361 5540232 Rcas_2746 Roseiflexus castenholzii DSM 13941 phosphodiesterase YP_001432835.1 3553831 R 383372 CDS YP_001432836.1 156742707 5540233 3554909..3556411 1 NC_009767.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2504 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 3556411 5540233 Rcas_2747 Roseiflexus castenholzii DSM 13941 EmrB/QacA family drug resistance transporter YP_001432836.1 3554909 D 383372 CDS YP_001432837.1 156742708 5540234 3556602..3557897 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2506 major facilitator superfamily MFS_1; major facilitator transporter 3557897 5540234 Rcas_2748 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432837.1 3556602 D 383372 CDS YP_001432838.1 156742709 5540235 complement(3557780..3559963) 1 NC_009767.1 KEGG: rrs:RoseRS_2507 membrane protein-like protein; hypothetical protein 3559963 5540235 Rcas_2749 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432838.1 3557780 R 383372 CDS YP_001432839.1 156742710 5540236 complement(3560027..3561169) 1 NC_009767.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rrs:RoseRS_2508 diguanylate cyclase; diguanylate cyclase 3561169 5540236 Rcas_2750 Roseiflexus castenholzii DSM 13941 diguanylate cyclase YP_001432839.1 3560027 R 383372 CDS YP_001432840.1 156742711 5540237 3561377..3562450 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2509 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3562450 5540237 Rcas_2751 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001432840.1 3561377 D 383372 CDS YP_001432841.1 156742712 5540238 3562475..3563515 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2510 glycosyl transferase, group 1; group 1 glycosyl transferase 3563515 5540238 Rcas_2752 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001432841.1 3562475 D 383372 CDS YP_001432842.1 156742713 5540239 3563512..3565905 1 NC_009767.1 PFAM: FG-GAP repeat protein; KEGG: rrs:RoseRS_2511 FG-GAP repeat protein; FG-GAP repeat-containing protein 3565905 5540239 Rcas_2753 Roseiflexus castenholzii DSM 13941 FG-GAP repeat-containing protein YP_001432842.1 3563512 D 383372 CDS YP_001432843.1 156742714 5540240 3566294..3567292 1 NC_009767.1 PFAM: ROK family protein; KEGG: rrs:RoseRS_2512 ROK family protein; ROK family protein 3567292 5540240 Rcas_2754 Roseiflexus castenholzii DSM 13941 ROK family protein YP_001432843.1 3566294 D 383372 CDS YP_001432844.1 156742715 5540241 3567289..3568488 1 NC_009767.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2513 oxidoreductase domain protein; oxidoreductase domain-containing protein 3568488 5540241 Rcas_2755 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432844.1 3567289 D 383372 CDS YP_001432845.1 156742716 5540242 3568579..3569391 1 NC_009767.1 KEGG: rrs:RoseRS_2514 uncharacterized protein containing SIS (sugar isomerase) phosphosugar binding domain-like protein; hypothetical protein 3569391 5540242 Rcas_2756 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432845.1 3568579 D 383372 CDS YP_001432846.1 156742717 5540243 3569406..3570176 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2515 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3570176 5540243 Rcas_2757 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001432846.1 3569406 D 383372 CDS YP_001432847.1 156742718 5540244 3570202..3571224 1 NC_009767.1 PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; KEGG: rrs:RoseRS_2516 methionine synthase, vitamin-B12 independent; vitamin-B12 independent methionine synthase 3571224 5540244 Rcas_2758 Roseiflexus castenholzii DSM 13941 vitamin-B12 independent methionine synthase YP_001432847.1 3570202 D 383372 CDS YP_001432848.1 156742719 5540245 complement(3571299..3571541) 1 NC_009767.1 KEGG: rrs:RoseRS_2517 hypothetical protein; hypothetical protein 3571541 5540245 Rcas_2759 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432848.1 3571299 R 383372 CDS YP_001432849.1 156742720 5540246 3571668..3572582 1 NC_009767.1 PFAM: diacylglycerol kinase catalytic region; KEGG: rrs:RoseRS_2518 diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 3572582 5540246 Rcas_2760 Roseiflexus castenholzii DSM 13941 diacylglycerol kinase catalytic subunit YP_001432849.1 3571668 D 383372 CDS YP_001432850.1 156742721 5540247 complement(3572589..3573539) 1 NC_009767.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_2519 protein of unknown function DUF6, transmembrane; hypothetical protein 3573539 5540247 Rcas_2761 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432850.1 3572589 R 383372 CDS YP_001432851.1 156742722 5540248 3574600..3575958 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2520 von Willebrand factor, type A; von Willebrand factor A 3575958 5540248 Rcas_2762 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001432851.1 3574600 D 383372 CDS YP_001432852.1 156742723 5540249 3575977..3577197 1 NC_009767.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3577197 5540249 Rcas_2763 Roseiflexus castenholzii DSM 13941 tryptophan synthase subunit beta YP_001432852.1 3575977 D 383372 CDS YP_001432853.1 156742724 5540250 3577219..3577695 1 NC_009767.1 KEGG: rrs:RoseRS_2522 hypothetical protein; hypothetical protein 3577695 5540250 Rcas_2764 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432853.1 3577219 D 383372 CDS YP_001432854.1 156742725 5540251 3577692..3578351 1 NC_009767.1 KEGG: rrs:RoseRS_2523 DNA-(apurinic or apyrimidinic site) lyase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase 3578351 5540251 Rcas_2765 Roseiflexus castenholzii DSM 13941 DNA-(apurinic or apyrimidinic site) lyase YP_001432854.1 3577692 D 383372 CDS YP_001432855.1 156742726 5540252 3578422..3578844 1 NC_009767.1 KEGG: rrs:RoseRS_2524 hypothetical protein; hypothetical protein 3578844 5540252 Rcas_2766 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432855.1 3578422 D 383372 CDS YP_001432856.1 156742727 5540253 complement(3578901..3582656) 1 NC_009767.1 KEGG: rrs:RoseRS_2525 magnesium chelatase, H subunit; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase; magnesium chelatase subunit H 3582656 5540253 Rcas_2767 Roseiflexus castenholzii DSM 13941 magnesium chelatase subunit H YP_001432856.1 3578901 R 383372 CDS YP_001432857.1 156742728 5540254 3582921..3584006 1 NC_009767.1 KEGG: rrs:RoseRS_2835 hypothetical protein; hypothetical protein 3584006 5540254 Rcas_2768 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432857.1 3582921 D 383372 CDS YP_001432858.1 156742729 5540255 3584006..3584251 1 NC_009767.1 KEGG: rrs:RoseRS_2834 hypothetical protein; hypothetical protein 3584251 5540255 Rcas_2769 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432858.1 3584006 D 383372 CDS YP_001432859.1 156742730 5540256 3584305..3584448 1 NC_009767.1 KEGG: rrs:RoseRS_2832 hypothetical protein; hypothetical protein 3584448 5540256 Rcas_2770 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432859.1 3584305 D 383372 CDS YP_001432860.1 156742731 5540257 complement(3584528..3585202) 1 NC_009767.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_2831 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3585202 5540257 Rcas_2771 Roseiflexus castenholzii DSM 13941 phospholipid/glycerol acyltransferase YP_001432860.1 3584528 R 383372 CDS YP_001432861.1 156742732 5540258 complement(3585325..3585774) 1 NC_009767.1 KEGG: rrs:RoseRS_2830 hypothetical protein; hypothetical protein 3585774 5540258 Rcas_2772 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432861.1 3585325 R 383372 CDS YP_001432862.1 156742733 5540259 complement(3585820..3588813) 1 NC_009767.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_2829 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3588813 5540259 Rcas_2773 Roseiflexus castenholzii DSM 13941 peptidase S8/S53 subtilisin kexin sedolisin YP_001432862.1 3585820 R 383372 CDS YP_001432863.1 156742734 5540260 3589185..3594110 1 NC_009767.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rrs:RoseRS_2828 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 3594110 5540260 Rcas_2774 Roseiflexus castenholzii DSM 13941 endonuclease/exonuclease/phosphatase YP_001432863.1 3589185 D 383372 CDS YP_001432864.1 156742735 5540261 3594206..3594595 1 NC_009767.1 KEGG: ppd:Ppro_2335 hypothetical protein; hypothetical protein 3594595 5540261 Rcas_2775 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432864.1 3594206 D 383372 CDS YP_001432865.1 156742736 5540262 3594715..3594948 1 NC_009767.1 PFAM: protein of unknown function DUF433; KEGG: sus:Acid_6200 protein of unknown function DUF433; hypothetical protein 3594948 5540262 Rcas_2776 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432865.1 3594715 D 383372 CDS YP_001432866.1 156742737 5540263 3594945..3595319 1 NC_009767.1 hypothetical protein 3595319 5540263 Rcas_2777 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432866.1 3594945 D 383372 CDS YP_001432867.1 156742738 5540264 3595424..3595720 1 NC_009767.1 PFAM: chaperonin Cpn10; KEGG: rrs:RoseRS_1076 chaperonin Cpn10; chaperonin Cpn10 3595720 5540264 Rcas_2778 Roseiflexus castenholzii DSM 13941 chaperonin Cpn10 YP_001432867.1 3595424 D 383372 CDS YP_001432868.1 156742739 5540265 3595724..3597364 1 NC_009767.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: rrs:RoseRS_1077 chaperonin GroEL; chaperonin GroEL 3597364 5540265 Rcas_2779 Roseiflexus castenholzii DSM 13941 chaperonin GroEL YP_001432868.1 3595724 D 383372 CDS YP_001432869.1 156742740 5540266 complement(3597502..3597996) 1 NC_009767.1 PFAM: cytochrome c class I; KEGG: sil:SPOA0361 cytochrome c family protein; cytochrome c class I 3597996 5540266 Rcas_2780 Roseiflexus castenholzii DSM 13941 cytochrome c class I YP_001432869.1 3597502 R 383372 CDS YP_001432870.1 156742741 5540267 complement(3598025..3599167) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0113 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3599167 5540267 Rcas_2781 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001432870.1 3598025 R 383372 CDS YP_001432871.1 156742742 5540268 complement(3599167..3599862) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0114 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3599862 5540268 Rcas_2782 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001432871.1 3599167 R 383372 CDS YP_001432872.1 156742743 5540269 complement(3599896..3600504) 1 NC_009767.1 PFAM: protein of unknown function DUF305; KEGG: rrs:RoseRS_4123 protein of unknown function DUF305; hypothetical protein 3600504 5540269 Rcas_2783 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432872.1 3599896 R 383372 CDS YP_001432873.1 156742744 5540270 3600697..3601308 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4336 protein of unknown function DUF820; hypothetical protein 3601308 5540270 Rcas_2784 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432873.1 3600697 D 383372 CDS YP_001432874.1 156742745 5540272 complement(3602342..3602641) 1 NC_009767.1 KEGG: rrs:RoseRS_1079 hypothetical protein; hypothetical protein 3602641 5540272 Rcas_2785 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432874.1 3602342 R 383372 CDS YP_001432875.1 156742746 5540273 complement(3602651..3604258) 1 NC_009767.1 PFAM: protein of unknown function DUF344; KEGG: rrs:RoseRS_1080 protein of unknown function DUF344; hypothetical protein 3604258 5540273 Rcas_2786 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432875.1 3602651 R 383372 CDS YP_001432876.1 156742747 5540274 complement(3604261..3605790) 1 NC_009767.1 KEGG: rrs:RoseRS_1081 glycogen/starch synthase, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; glycogen/starch synthase 3605790 5540274 Rcas_2787 Roseiflexus castenholzii DSM 13941 glycogen/starch synthase YP_001432876.1 3604261 R 383372 CDS YP_001432877.1 156742748 5540275 complement(3605806..3606882) 1 NC_009767.1 KEGG: rrs:RoseRS_1082 hypothetical protein; hypothetical protein 3606882 5540275 Rcas_2788 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432877.1 3605806 R 383372 CDS YP_001432878.1 156742749 5540276 complement(3607080..3608051) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: rrs:RoseRS_3536 PAS/PAC sensor protein; PAS/PAC sensor protein 3608051 5540276 Rcas_2789 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001432878.1 3607080 R 383372 CDS YP_001432879.1 156742750 5540277 complement(3608227..3608973) 1 NC_009767.1 KEGG: rrs:RoseRS_1083 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 3608973 5540277 Rcas_2790 Roseiflexus castenholzii DSM 13941 deoxyribose-phosphate aldolase YP_001432879.1 3608227 R 383372 CDS YP_001432880.1 156742751 5540278 3609425..3610573 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_1084 oxidoreductase domain protein; oxidoreductase domain-containing protein 3610573 5540278 Rcas_2791 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432880.1 3609425 D 383372 CDS YP_001432881.1 156742752 5540279 3610592..3611509 1 NC_009767.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_1085 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3611509 5540279 Rcas_2792 Roseiflexus castenholzii DSM 13941 xylose isomerase domain-containing protein YP_001432881.1 3610592 D 383372 CDS YP_001432882.1 156742753 5540280 complement(3611585..3612205) 1 NC_009767.1 PFAM: oxidoreductase molybdopterin binding; KEGG: rrs:RoseRS_1086 oxidoreductase, molybdopterin binding; molybdopterin binding oxidoreductase 3612205 5540280 Rcas_2793 Roseiflexus castenholzii DSM 13941 molybdopterin binding oxidoreductase YP_001432882.1 3611585 R 383372 CDS YP_001432883.1 156742754 5540281 complement(3612220..3612612) 1 NC_009767.1 KEGG: rrs:RoseRS_1087 hypothetical protein; hypothetical protein 3612612 5540281 Rcas_2794 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432883.1 3612220 R 383372 CDS YP_001432884.1 156742755 5540282 3612955..3613755 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_1088 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3613755 5540282 Rcas_2795 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001432884.1 3612955 D 383372 CDS YP_001432885.1 156742756 5540283 complement(3614095..3615183) 1 NC_009767.1 PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_1089 transcriptional regulator, GntR family; GntR family transcriptional regulator 3615183 5540283 Rcas_2796 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001432885.1 3614095 R 383372 CDS YP_001432886.1 156742757 5540284 3615334..3615549 1 NC_009767.1 KEGG: rrs:RoseRS_1090 hypothetical protein; hypothetical protein 3615549 5540284 Rcas_2797 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432886.1 3615334 D 383372 CDS YP_001432887.1 156742758 5540285 complement(3615740..3616558) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1091 methyltransferase type 11; type 11 methyltransferase 3616558 5540285 Rcas_2798 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001432887.1 3615740 R 383372 CDS YP_001432888.1 156742759 5540286 complement(3616849..3620202) 1 NC_009767.1 PFAM: peptidase S41; WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_1092 peptidase S41; peptidase S41 3620202 5540286 Rcas_2799 Roseiflexus castenholzii DSM 13941 peptidase S41 YP_001432888.1 3616849 R 383372 CDS YP_001432889.1 156742760 5540287 3620835..3622727 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_1093 extracellular solute-binding protein, family 5; extracellular solute-binding protein 3622727 5540287 Rcas_2800 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001432889.1 3620835 D 383372 CDS YP_001432890.1 156742761 5540288 3622821..3623744 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1094 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3623744 5540288 Rcas_2801 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432890.1 3622821 D 383372 CDS YP_001432891.1 156742762 5540289 3623763..3624665 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1095 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3624665 5540289 Rcas_2802 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432891.1 3623763 D 383372 CDS YP_001432892.1 156742763 5540290 3624935..3625585 1 NC_009767.1 PFAM: regulatory protein ArsR; KEGG: ava:Ava_3702 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 3625585 5540290 Rcas_2803 Roseiflexus castenholzii DSM 13941 ArsR family transcriptional regulator YP_001432892.1 3624935 D 383372 CDS YP_001432893.1 156742764 5540291 3625709..3627046 1 NC_009767.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_1675 catalytic domain of components of various dehydrogenase complexes; dehydrogenase catalytic domain-containing protein 3627046 5540291 Rcas_2804 Roseiflexus castenholzii DSM 13941 dehydrogenase catalytic domain-containing protein YP_001432893.1 3625709 D 383372 CDS YP_001432894.1 156742765 5540292 complement(3627056..3630529) 1 NC_009767.1 PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1674 protein kinase; serine/threonine kinase 3630529 5540292 Rcas_2805 Roseiflexus castenholzii DSM 13941 serine/threonine kinase YP_001432894.1 3627056 R 383372 CDS YP_001432895.1 156742766 5540293 complement(3630588..3632048) 1 NC_009767.1 KEGG: cac:CAC2045 secreted protein containing domain of murein hydrolase (MltA homolog); hypothetical protein 3632048 5540293 Rcas_2806 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432895.1 3630588 R 383372 CDS YP_001432896.1 156742767 5540294 complement(3632063..3636337) 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1673 FHA domain containing protein; FHA domain-containing protein 3636337 5540294 Rcas_2807 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432896.1 3632063 R 383372 CDS YP_001432897.1 156742768 5540295 complement(3636374..3639058) 1 NC_009767.1 TIGRFAM: conserved repeat domain; PFAM: Forkhead-associated protein; Na-Ca exchanger/integrin-beta4; KEGG: rrs:RoseRS_1672 forkhead-associated protein; FHA domain-containing protein 3639058 5540295 Rcas_2808 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432897.1 3636374 R 383372 CDS YP_001432898.1 156742769 5540296 complement(3639079..3640935) 1 NC_009767.1 PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1671 protein kinase; serine/threonine kinase 3640935 5540296 Rcas_2809 Roseiflexus castenholzii DSM 13941 serine/threonine kinase YP_001432898.1 3639079 R 383372 CDS YP_001432899.1 156742770 5540297 complement(3640935..3644039) 1 NC_009767.1 PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1670 protein kinase; serine/threonine kinase 3644039 5540297 Rcas_2810 Roseiflexus castenholzii DSM 13941 serine/threonine kinase YP_001432899.1 3640935 R 383372 CDS YP_001432900.1 156742771 5540298 complement(3644101..3647274) 1 NC_009767.1 PFAM: Forkhead-associated protein; protein kinase; tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_1669 protein kinase; serine/threonine kinase 3647274 5540298 Rcas_2811 Roseiflexus castenholzii DSM 13941 serine/threonine kinase YP_001432900.1 3644101 R 383372 CDS YP_001432901.1 156742772 5540299 complement(3647292..3648899) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1668 methyltransferase type 12; type 12 methyltransferase 3648899 5540299 Rcas_2812 Roseiflexus castenholzii DSM 13941 type 12 methyltransferase YP_001432901.1 3647292 R 383372 CDS YP_001432902.1 156742773 5540300 complement(3648896..3649960) 1 NC_009767.1 TIGRFAM: phage tail protein; PFAM: Forkhead-associated protein; tail domain protein; KEGG: rrs:RoseRS_1667 FHA domain containing protein; FHA domain-containing protein 3649960 5540300 Rcas_2813 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001432902.1 3648896 R 383372 CDS YP_001432903.1 156742774 5540301 complement(3650110..3652140) 1 NC_009767.1 KEGG: rrs:RoseRS_1666 hypothetical protein; hypothetical protein 3652140 5540301 Rcas_2814 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432903.1 3650110 R 383372 CDS YP_001432904.1 156742775 5540302 complement(3652152..3652544) 1 NC_009767.1 PFAM: GPW/gp25 family protein; KEGG: rrs:RoseRS_1665 gpW/GP25 family protein; GPW/gp25 family protein 3652544 5540302 Rcas_2815 Roseiflexus castenholzii DSM 13941 GPW/gp25 family protein YP_001432904.1 3652152 R 383372 CDS YP_001432905.1 156742776 5540303 complement(3652551..3652841) 1 NC_009767.1 PFAM: PAAR repeat-containing protein; KEGG: rrs:RoseRS_1664 PaaR repeat-containing protein; PAAR repeat-containing protein 3652841 5540303 Rcas_2816 Roseiflexus castenholzii DSM 13941 PAAR repeat-containing protein YP_001432905.1 3652551 R 383372 CDS YP_001432906.1 156742777 5540304 complement(3652855..3654636) 1 NC_009767.1 PFAM: Rhs element Vgr protein; KEGG: rrs:RoseRS_1663 rhs element Vgr protein; Rhs element Vgr protein 3654636 5540304 Rcas_2817 Roseiflexus castenholzii DSM 13941 Rhs element Vgr protein YP_001432906.1 3652855 R 383372 CDS YP_001432907.1 156742778 5540305 complement(3654629..3655306) 1 NC_009767.1 PFAM: Peptidoglycan-binding LysM; KEGG: rrs:RoseRS_1662 hypothetical protein; peptidoglycan-binding protein LysM 3655306 5540305 Rcas_2818 Roseiflexus castenholzii DSM 13941 peptidoglycan-binding protein LysM YP_001432907.1 3654629 R 383372 CDS YP_001432908.1 156742779 5540306 complement(3655321..3657939) 1 NC_009767.1 KEGG: rrs:RoseRS_1661 hypothetical protein; hypothetical protein 3657939 5540306 Rcas_2819 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432908.1 3655321 R 383372 CDS YP_001432909.1 156742780 5540307 complement(3658127..3658555) 1 NC_009767.1 TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_1660 conserved hypothetical phage tail protein; phage tail protein 3658555 5540307 Rcas_2820 Roseiflexus castenholzii DSM 13941 phage tail protein YP_001432909.1 3658127 R 383372 CDS YP_001432910.1 156742781 5540308 complement(3658756..3659124) 1 NC_009767.1 KEGG: rrs:RoseRS_1659 hypothetical protein; hypothetical protein 3659124 5540308 Rcas_2821 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432910.1 3658756 R 383372 CDS YP_001432911.1 156742782 5540309 complement(3659528..3659968) 1 NC_009767.1 TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_1658 conserved hypothetical phage tail protein; phage tail protein 3659968 5540309 Rcas_2822 Roseiflexus castenholzii DSM 13941 phage tail protein YP_001432911.1 3659528 R 383372 CDS YP_001432912.1 156742783 5540310 complement(3659987..3661552) 1 NC_009767.1 PFAM: tail sheath protein; KEGG: rrs:RoseRS_1657 phage tail sheath protein; tail sheath protein 3661552 5540310 Rcas_2823 Roseiflexus castenholzii DSM 13941 tail sheath protein YP_001432912.1 3659987 R 383372 CDS YP_001432913.1 156742784 5540311 complement(3661565..3662527) 1 NC_009767.1 KEGG: rrs:RoseRS_1656 hypothetical protein; hypothetical protein 3662527 5540311 Rcas_2824 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432913.1 3661565 R 383372 CDS YP_001432914.1 156742785 5540312 complement(3662524..3662946) 1 NC_009767.1 KEGG: rrs:RoseRS_1655 hypothetical protein; hypothetical protein 3662946 5540312 Rcas_2825 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432914.1 3662524 R 383372 CDS YP_001432915.1 156742786 5540313 complement(3662970..3664634) 1 NC_009767.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rrs:RoseRS_1654 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 3664634 5540313 Rcas_2826 Roseiflexus castenholzii DSM 13941 peptidoglycan binding domain-containing protein YP_001432915.1 3662970 R 383372 CDS YP_001432916.1 156742787 5540314 complement(3664724..3666616) 1 NC_009767.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rrs:RoseRS_1654 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 3666616 5540314 Rcas_2827 Roseiflexus castenholzii DSM 13941 peptidoglycan binding domain-containing protein YP_001432916.1 3664724 R 383372 CDS YP_001432917.1 156742788 5540315 complement(3666636..3667565) 1 NC_009767.1 KEGG: rrs:RoseRS_1653 hypothetical protein; hypothetical protein 3667565 5540315 Rcas_2828 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432917.1 3666636 R 383372 CDS YP_001432918.1 156742789 5540316 complement(3667584..3669236) 1 NC_009767.1 KEGG: rrs:RoseRS_1652 hypothetical protein; hypothetical protein 3669236 5540316 Rcas_2829 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432918.1 3667584 R 383372 CDS YP_001432919.1 156742790 5540317 complement(3670056..3672029) 1 NC_009767.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1651 AAA ATPase, central domain protein; ATPase central domain-containing protein 3672029 5540317 Rcas_2830 Roseiflexus castenholzii DSM 13941 ATPase central domain-containing protein YP_001432919.1 3670056 R 383372 CDS YP_001432920.1 156742791 5540318 complement(3672057..3672635) 1 NC_009767.1 KEGG: rrs:RoseRS_1650 hypothetical protein; hypothetical protein 3672635 5540318 Rcas_2831 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432920.1 3672057 R 383372 CDS YP_001432921.1 156742792 5540319 3672925..3674508 1 NC_009767.1 KEGG: rrs:RoseRS_1649 hypothetical protein; hypothetical protein 3674508 5540319 Rcas_2832 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432921.1 3672925 D 383372 CDS YP_001432922.1 156742793 5540320 complement(3674568..3674966) 1 NC_009767.1 hypothetical protein 3674966 5540320 Rcas_2833 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432922.1 3674568 R 383372 CDS YP_001432923.1 156742794 5540321 complement(3675132..3675551) 1 NC_009767.1 PFAM: RbsD or FucU transport; KEGG: rrs:RoseRS_1648 RbsD or FucU transport; transport protein RbsD/FucU 3675551 5540321 Rcas_2834 Roseiflexus castenholzii DSM 13941 transport protein RbsD/FucU YP_001432923.1 3675132 R 383372 CDS YP_001432924.1 156742795 5540322 complement(3675625..3675918) 1 NC_009767.1 PFAM: regulatory protein MerR; KEGG: rrs:RoseRS_1647 transcriptional regulator, MerR family; MerR family transcriptional regulator 3675918 5540322 Rcas_2835 Roseiflexus castenholzii DSM 13941 MerR family transcriptional regulator YP_001432924.1 3675625 R 383372 CDS YP_001432925.1 156742796 5540323 complement(3675933..3676796) 1 NC_009767.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rrs:RoseRS_1646 chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein 3676796 5540323 Rcas_2836 Roseiflexus castenholzii DSM 13941 chaperone DnaJ domain-containing protein YP_001432925.1 3675933 R 383372 CDS YP_001432926.1 156742797 5540326 complement(3677271..3678461) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_1645 extracellular solute-binding protein, family 1; extracellular solute-binding protein 3678461 5540326 Rcas_2837 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001432926.1 3677271 R 383372 CDS YP_001432927.1 156742798 5540327 complement(3679327..3680187) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1644 ornithine carbamoyltransferase; ornithine carbamoyltransferase 3680187 5540327 Rcas_2838 Roseiflexus castenholzii DSM 13941 ornithine carbamoyltransferase YP_001432927.1 3679327 R 383372 CDS YP_001432928.1 156742799 5540328 complement(3680335..3681243) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1642 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3681243 5540328 Rcas_2839 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001432928.1 3680335 R 383372 CDS YP_001432929.1 156742800 5540329 complement(3681259..3682377) 1 NC_009767.1 KEGG: rrs:RoseRS_1641 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 3682377 5540329 Rcas_2840 Roseiflexus castenholzii DSM 13941 spermidine/putrescine ABC transporter ATPase YP_001432929.1 3681259 R 383372 CDS YP_001432930.1 156742801 5540330 3683137..3685416 1 NC_009767.1 TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; KEGG: rrs:RoseRS_1640 polymorphic outer membrane protein; polymorphic outer membrane protein 3685416 5540330 Rcas_2841 Roseiflexus castenholzii DSM 13941 polymorphic outer membrane protein YP_001432930.1 3683137 D 383372 CDS YP_001432931.1 156742802 5540331 3685693..3686268 1 NC_009767.1 TIGRFAM: LPXTG-motif cell wall anchor domain; KEGG: rrs:RoseRS_1639 LPXTG-motif cell wall anchor domain; cell wall anchor domain-containing protein 3686268 5540331 Rcas_2842 Roseiflexus castenholzii DSM 13941 cell wall anchor domain-containing protein YP_001432931.1 3685693 D 383372 CDS YP_001432932.1 156742803 5540332 3686578..3686970 1 NC_009767.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3686970 5540332 Rcas_2843 Roseiflexus castenholzii DSM 13941 camphor resistance protein CrcB YP_001432932.1 3686578 D 383372 CDS YP_001432933.1 156742804 5540333 3686985..3688271 1 NC_009767.1 PFAM: CBS domain containing protein; protein of unknown function DUF190; KEGG: rrs:RoseRS_2494 CBS domain containing protein; hypothetical protein 3688271 5540333 Rcas_2844 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432933.1 3686985 D 383372 CDS YP_001432934.1 156742805 5540334 3688502..3690181 1 NC_009767.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 3690181 5540334 Rcas_2845 Roseiflexus castenholzii DSM 13941 ABC transporter ATP-binding protein YP_001432934.1 3688502 D 383372 CDS YP_001432935.1 156742806 5540335 3690307..3692166 1 NC_009767.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 3692166 5540335 Rcas_2846 Roseiflexus castenholzii DSM 13941 phosphoenolpyruvate carboxykinase YP_001432935.1 3690307 D 383372 CDS YP_001432936.1 156742807 5540336 3692385..3693503 1 NC_009767.1 PFAM: oxidoreductase domain protein; KEGG: rrs:RoseRS_2497 oxidoreductase domain protein; oxidoreductase domain-containing protein 3693503 5540336 Rcas_2847 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001432936.1 3692385 D 383372 CDS YP_001432937.1 156742808 5540337 complement(3693873..3694718) 1 NC_009767.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rrs:RoseRS_2498 gluconolactonase; gluconolactonase 3694718 5540337 Rcas_2848 Roseiflexus castenholzii DSM 13941 gluconolactonase YP_001432937.1 3693873 R 383372 CDS YP_001432938.1 156742809 5540338 3694858..3697743 1 NC_009767.1 PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2499 protein serine phosphatase with GAF(s) sensor(s); GAF sensor-containing protein serine phosphatase 3697743 5540338 Rcas_2849 Roseiflexus castenholzii DSM 13941 GAF sensor-containing protein serine phosphatase YP_001432938.1 3694858 D 383372 CDS YP_001432939.1 156742810 5540340 3698492..3701677 1 NC_009767.1 PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; Glycoside hydrolase family 38 central region; KEGG: rrs:RoseRS_1434 alpha-mannosidase; alpha-mannosidase 3701677 5540340 Rcas_2851 Roseiflexus castenholzii DSM 13941 alpha-mannosidase YP_001432939.1 3698492 D 383372 CDS YP_001432940.1 156742811 5540341 3702157..3703170 1 NC_009767.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rrs:RoseRS_1433 arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase 3703170 5540341 Rcas_2852 Roseiflexus castenholzii DSM 13941 arginase/agmatinase/formiminoglutamase YP_001432940.1 3702157 D 383372 CDS YP_001432941.1 156742812 5540343 3703783..3704754 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_1431 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3704754 5540343 Rcas_2854 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001432941.1 3703783 D 383372 CDS YP_001432942.1 156742813 5540344 3705244..3707424 1 NC_009767.1 PFAM: cell surface receptor IPT/TIG domain protein; KEGG: rrs:RoseRS_1250 cell surface receptor IPT/TIG domain protein; cell surface receptor IPT/TIG domain-containing protein 3707424 5540344 Rcas_2855 Roseiflexus castenholzii DSM 13941 cell surface receptor IPT/TIG domain-containing protein YP_001432942.1 3705244 D 383372 CDS YP_001432943.1 156742814 5540345 3707915..3709039 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2631 twin-arginine translocation pathway signal; major facilitator transporter 3709039 5540345 Rcas_2856 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001432943.1 3707915 D 383372 CDS YP_001432944.1 156742815 5540346 3709080..3710528 1 NC_009767.1 PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: rrs:RoseRS_1251 peptidase S41; peptidase S41 3710528 5540346 Rcas_2857 Roseiflexus castenholzii DSM 13941 peptidase S41 YP_001432944.1 3709080 D 383372 CDS YP_001432945.1 156742816 5540347 3710885..3711694 1 NC_009767.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 3711694 trpC 5540347 trpC Roseiflexus castenholzii DSM 13941 indole-3-glycerol-phosphate synthase YP_001432945.1 3710885 D 383372 CDS YP_001432946.1 156742817 5540348 3711731..3712171 1 NC_009767.1 KEGG: rrs:RoseRS_1253 hypothetical protein; hypothetical protein 3712171 5540348 Rcas_2859 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432946.1 3711731 D 383372 CDS YP_001432947.1 156742818 5540349 3712168..3713601 1 NC_009767.1 PFAM: Amidase; KEGG: rrs:RoseRS_1254 amidase; amidase 3713601 5540349 Rcas_2860 Roseiflexus castenholzii DSM 13941 amidase YP_001432947.1 3712168 D 383372 CDS YP_001432948.1 156742819 5540350 3713986..3714195 1 NC_009767.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_1405 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 3714195 5540350 Rcas_2861 Roseiflexus castenholzii DSM 13941 AbrB family transcriptional regulator YP_001432948.1 3713986 D 383372 CDS YP_001432949.1 156742820 5540352 complement(3714771..3715253) 1 NC_009767.1 KEGG: rrs:RoseRS_2902 response regulator receiver protein; response regulator receiver protein 3715253 5540352 Rcas_2863 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001432949.1 3714771 R 383372 CDS YP_001432950.1 156742821 5540355 complement(3716862..3717692) 1 NC_009767.1 TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: tbd:Tbd_1215 integron integrase; integron integrase 3717692 5540355 Rcas_2866 Roseiflexus castenholzii DSM 13941 integron integrase YP_001432950.1 3716862 R 383372 CDS YP_001432951.1 156742822 5540356 3718619..3718951 1 NC_009767.1 KEGG: mhu:Mhun_2566 hypothetical protein; hypothetical protein 3718951 5540356 Rcas_2867 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432951.1 3718619 D 383372 CDS YP_001432952.1 156742823 5540358 3719327..3719641 1 NC_009767.1 KEGG: cph:Cpha266_1139 hypothetical protein; hypothetical protein 3719641 5540358 Rcas_2869 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432952.1 3719327 D 383372 CDS YP_001432953.1 156742824 5540362 3721198..3723351 1 NC_009767.1 TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; KEGG: rba:RB4375 probable extracellular nuclease; polymorphic outer membrane protein 3723351 5540362 Rcas_2873 Roseiflexus castenholzii DSM 13941 polymorphic outer membrane protein YP_001432953.1 3721198 D 383372 CDS YP_001432954.1 156742825 5540363 3723455..3724693 1 NC_009767.1 TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; KEGG: rba:RB1661 hypothetical protein; polymorphic outer membrane protein 3724693 5540363 Rcas_2874 Roseiflexus castenholzii DSM 13941 polymorphic outer membrane protein YP_001432954.1 3723455 D 383372 CDS YP_001432955.1 156742826 5540364 3724683..3724988 1 NC_009767.1 hypothetical protein 3724988 5540364 Rcas_2875 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432955.1 3724683 D 383372 CDS YP_001432956.1 156742827 5540365 3724985..3725500 1 NC_009767.1 hypothetical protein 3725500 5540365 Rcas_2876 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432956.1 3724985 D 383372 CDS YP_001432957.1 156742828 5540366 complement(3726037..3726585) 1 NC_009767.1 KEGG: rrs:RoseRS_2903 hypothetical protein; hypothetical protein 3726585 5540366 Rcas_2877 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432957.1 3726037 R 383372 CDS YP_001432958.1 156742829 5540367 3726715..3728388 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2904 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 3728388 5540367 Rcas_2878 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001432958.1 3726715 D 383372 CDS YP_001432959.1 156742830 5540368 3728402..3737749 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: rrs:RoseRS_2905 beta-ketoacyl synthase; beta-ketoacyl synthase 3737749 5540368 Rcas_2879 Roseiflexus castenholzii DSM 13941 beta-ketoacyl synthase YP_001432959.1 3728402 D 383372 CDS YP_001432960.1 156742831 5540369 3737821..3738585 1 NC_009767.1 KEGG: rrs:RoseRS_2906 phosphopantetheinyl transferase-like protein; phosphopantetheinyl transferase-like protein 3738585 5540369 Rcas_2880 Roseiflexus castenholzii DSM 13941 phosphopantetheinyl transferase-like protein YP_001432960.1 3737821 D 383372 CDS YP_001432961.1 156742832 5540370 3738582..3740126 1 NC_009767.1 PFAM: carboxyl transferase; KEGG: rrs:RoseRS_2907 propionyl-CoA carboxylase; carboxyl transferase 3740126 5540370 Rcas_2881 Roseiflexus castenholzii DSM 13941 carboxyl transferase YP_001432961.1 3738582 D 383372 CDS YP_001432962.1 156742833 5540371 3740137..3741618 1 NC_009767.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_2908 biotin carboxylase domain protein; carbamoyl-phosphate synthase L chain ATP-binding 3741618 5540371 Rcas_2882 Roseiflexus castenholzii DSM 13941 carbamoyl-phosphate synthase L chain ATP-binding YP_001432962.1 3740137 D 383372 CDS YP_001432963.1 156742834 5540372 3741630..3742124 1 NC_009767.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rrs:RoseRS_2909 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 3742124 5540372 Rcas_2883 Roseiflexus castenholzii DSM 13941 biotin/lipoyl attachment domain-containing protein YP_001432963.1 3741630 D 383372 CDS YP_001432964.1 156742835 5540373 3743533..3743697 1 NC_009767.1 PFAM: YcfA family protein; KEGG: bte:BTH_II1999 hypothetical protein; hypothetical protein 3743697 5540373 Rcas_2884 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432964.1 3743533 D 383372 CDS YP_001432965.1 156742836 5540374 3743704..3744117 1 NC_009767.1 PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; KEGG: lpf:plpl0034 hypothetical protein; hypothetical protein 3744117 5540374 Rcas_2885 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432965.1 3743704 D 383372 CDS YP_001432966.1 156742837 5540375 3744098..3744670 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rba:RB8456 hypothetical protein; hypothetical protein 3744670 5540375 Rcas_2886 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432966.1 3744098 D 383372 CDS YP_001432967.1 156742838 5540376 complement(3744677..3745732) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_3157 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 3745732 5540376 Rcas_2887 Roseiflexus castenholzii DSM 13941 RpoD family RNA polymerase sigma factor YP_001432967.1 3744677 R 383372 CDS YP_001432968.1 156742839 5540377 complement(3745802..3747082) 1 NC_009767.1 PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_3160 protein of unknown function DUF58; hypothetical protein 3747082 5540377 Rcas_2888 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432968.1 3745802 R 383372 CDS YP_001432969.1 156742840 5540378 complement(3747091..3748485) 1 NC_009767.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 3748485 trmE 5540378 trmE Roseiflexus castenholzii DSM 13941 tRNA modification GTPase TrmE YP_001432969.1 3747091 R 383372 CDS YP_001432970.1 156742841 5540379 complement(3748787..3750160) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3162 response regulator receiver protein; response regulator receiver protein 3750160 5540379 Rcas_2890 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001432970.1 3748787 R 383372 CDS YP_001432971.1 156742842 5540380 3750232..3751221 1 NC_009767.1 PFAM: dihydrodipicolinate reductase; KEGG: rrs:RoseRS_3163 dihydrodipicolinate reductase; dihydrodipicolinate reductase 3751221 5540380 Rcas_2891 Roseiflexus castenholzii DSM 13941 dihydrodipicolinate reductase YP_001432971.1 3750232 D 383372 CDS YP_001432972.1 156742843 5540381 complement(3751226..3752005) 1 NC_009767.1 KEGG: rrs:RoseRS_3164 hypothetical protein; hypothetical protein 3752005 5540381 Rcas_2892 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432972.1 3751226 R 383372 CDS YP_001432973.1 156742844 5540382 complement(3752933..3754357) 1 NC_009767.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3165 PucC protein; PUCC protein 3754357 5540382 Rcas_2893 Roseiflexus castenholzii DSM 13941 PUCC protein YP_001432973.1 3752933 R 383372 CDS YP_001432974.1 156742845 5540383 complement(3754474..3755922) 1 NC_009767.1 PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_3166 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 3755922 5540383 Rcas_2894 Roseiflexus castenholzii DSM 13941 cyclic nucleotide-binding protein YP_001432974.1 3754474 R 383372 CDS YP_001432975.1 156742846 5540384 complement(3755929..3756525) 1 NC_009767.1 KEGG: rrs:RoseRS_3167 hypothetical protein; hypothetical protein 3756525 5540384 Rcas_2895 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432975.1 3755929 R 383372 CDS YP_001432976.1 156742847 5540385 3756567..3758597 1 NC_009767.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3758597 5540385 Rcas_2896 Roseiflexus castenholzii DSM 13941 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001432976.1 3756567 D 383372 CDS YP_001432977.1 156742848 5540387 complement(3758833..3759771) 1 NC_009767.1 PFAM: ROK family protein; KEGG: rrs:RoseRS_3170 ROK family protein; ROK family protein 3759771 5540387 Rcas_2897 Roseiflexus castenholzii DSM 13941 ROK family protein YP_001432977.1 3758833 R 383372 CDS YP_001432978.1 156742849 5540388 complement(3759768..3760334) 1 NC_009767.1 PFAM: sugar isomerase (SIS); KEGG: rrs:RoseRS_3171 sugar isomerase (SIS); sugar isomerase (SIS) 3760334 5540388 Rcas_2898 Roseiflexus castenholzii DSM 13941 sugar isomerase (SIS) YP_001432978.1 3759768 R 383372 CDS YP_001432979.1 156742850 5540389 3760606..3761154 1 NC_009767.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rrs:RoseRS_3172 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 3761154 5540389 Rcas_2899 Roseiflexus castenholzii DSM 13941 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001432979.1 3760606 D 383372 CDS YP_001432980.1 156742851 5540390 3761205..3762386 1 NC_009767.1 KEGG: rrs:RoseRS_3173 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 3762386 5540390 Rcas_2900 Roseiflexus castenholzii DSM 13941 exodeoxyribonuclease VII large subunit YP_001432980.1 3761205 D 383372 CDS YP_001432981.1 156742852 5540391 3762608..3762850 1 NC_009767.1 PFAM: Exonuclease VII small subunit; KEGG: rrs:RoseRS_3174 exodeoxyribonuclease VII, small subunit; exonuclease VII small subunit 3762850 5540391 Rcas_2901 Roseiflexus castenholzii DSM 13941 exonuclease VII small subunit YP_001432981.1 3762608 D 383372 CDS YP_001432982.1 156742853 5540392 3762847..3764721 1 NC_009767.1 KEGG: rrs:RoseRS_3175 hypothetical protein; hypothetical protein 3764721 5540392 Rcas_2902 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432982.1 3762847 D 383372 CDS YP_001432983.1 156742854 5540393 complement(3764954..3765877) 1 NC_009767.1 PFAM: Auxin Efflux Carrier; KEGG: rrs:RoseRS_3176 auxin efflux carrier; auxin efflux carrier 3765877 5540393 Rcas_2903 Roseiflexus castenholzii DSM 13941 auxin efflux carrier YP_001432983.1 3764954 R 383372 CDS YP_001432984.1 156742855 5540394 complement(3765982..3767637) 1 NC_009767.1 KEGG: rrs:RoseRS_3177 spermidine synthase-like protein; spermidine synthase-like protein 3767637 5540394 Rcas_2904 Roseiflexus castenholzii DSM 13941 spermidine synthase-like protein YP_001432984.1 3765982 R 383372 CDS YP_001432985.1 156742856 5540395 complement(3767752..3768009) 1 NC_009767.1 PFAM: protein of unknown function YGGT; KEGG: rrs:RoseRS_3178 protein of unknown function YGGT; hypothetical protein 3768009 5540395 Rcas_2905 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432985.1 3767752 R 383372 CDS YP_001432986.1 156742857 5540396 complement(3768163..3769506) 1 NC_009767.1 PFAM: histidinol dehydrogenase; KEGG: rrs:RoseRS_3179 histidinol dehydrogenase; histidinol dehydrogenase 3769506 5540396 Rcas_2906 Roseiflexus castenholzii DSM 13941 histidinol dehydrogenase YP_001432986.1 3768163 R 383372 CDS YP_001432987.1 156742858 5540397 complement(3769506..3770522) 1 NC_009767.1 KEGG: rrs:RoseRS_3180 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase 3770522 5540397 Rcas_2907 Roseiflexus castenholzii DSM 13941 ATP phosphoribosyltransferase YP_001432987.1 3769506 R 383372 CDS YP_001432988.1 156742859 5540398 complement(3770522..3771073) 1 NC_009767.1 KEGG: rrs:RoseRS_3181 hypothetical protein; hypothetical protein 3771073 5540398 Rcas_2908 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432988.1 3770522 R 383372 CDS YP_001432989.1 156742860 5540399 complement(3771081..3772013) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2797 protein of unknown function DUF820; hypothetical protein 3772013 5540399 Rcas_2909 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432989.1 3771081 R 383372 CDS YP_001432990.1 156742861 5540400 complement(3772024..3772821) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein 3772821 5540400 Rcas_2910 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432990.1 3772024 R 383372 CDS YP_001432991.1 156742862 5540401 complement(3772892..3774151) 1 NC_009767.1 PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_3183 protein of unknown function DUF58; hypothetical protein 3774151 5540401 Rcas_2911 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432991.1 3772892 R 383372 CDS YP_001432992.1 156742863 5540402 complement(3774148..3775104) 1 NC_009767.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_3184 ATPase associated with various cellular activities, AAA_3; ATPase 3775104 5540402 Rcas_2912 Roseiflexus castenholzii DSM 13941 ATPase YP_001432992.1 3774148 R 383372 CDS YP_001432993.1 156742864 5540403 complement(3775120..3775701) 1 NC_009767.1 KEGG: rrs:RoseRS_3185 hypothetical protein; hypothetical protein 3775701 5540403 Rcas_2913 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432993.1 3775120 R 383372 CDS YP_001432994.1 156742865 5540404 complement(3776015..3776890) 1 NC_009767.1 KEGG: rrs:RoseRS_3186 hypothetical protein; hypothetical protein 3776890 5540404 Rcas_2914 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001432994.1 3776015 R 383372 CDS YP_001432995.1 156742866 5540405 complement(3776894..3778348) 1 NC_009767.1 KEGG: rrs:RoseRS_3187 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 3778348 5540405 Rcas_2915 Roseiflexus castenholzii DSM 13941 histidyl-tRNA synthetase YP_001432995.1 3776894 R 383372 CDS YP_001432996.1 156742867 5540406 complement(3778449..3780179) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3188 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3780179 5540406 Rcas_2916 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001432996.1 3778449 R 383372 CDS YP_001432997.1 156742868 5540407 3780227..3781180 1 NC_009767.1 PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: rrs:RoseRS_3189 HhH-GPD family protein; HhH-GPD family protein 3781180 5540407 Rcas_2917 Roseiflexus castenholzii DSM 13941 HhH-GPD family protein YP_001432997.1 3780227 D 383372 CDS YP_001432998.1 156742869 5540408 3781214..3782251 1 NC_009767.1 PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_3190 histone deacetylase superfamily; histone deacetylase superfamily protein 3782251 5540408 Rcas_2918 Roseiflexus castenholzii DSM 13941 histone deacetylase superfamily protein YP_001432998.1 3781214 D 383372 CDS YP_001432999.1 156742870 5540409 3782337..3782960 1 NC_009767.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3782960 hisH 5540409 hisH Roseiflexus castenholzii DSM 13941 imidazole glycerol phosphate synthase subunit HisH YP_001432999.1 3782337 D 383372 CDS YP_001433000.1 156742871 5540410 3782960..3783673 1 NC_009767.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3783673 5540410 Rcas_2920 Roseiflexus castenholzii DSM 13941 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001433000.1 3782960 D 383372 CDS YP_001433001.1 156742872 5540411 3783683..3784789 1 NC_009767.1 KEGG: rrs:RoseRS_3193 hypothetical protein; hypothetical protein 3784789 5540411 Rcas_2921 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433001.1 3783683 D 383372 CDS YP_001433002.1 156742873 5540412 3784819..3785595 1 NC_009767.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3785595 5540412 Rcas_2922 Roseiflexus castenholzii DSM 13941 imidazole glycerol phosphate synthase subunit HisF YP_001433002.1 3784819 D 383372 CDS YP_001433003.1 156742874 5540413 3785696..3786409 1 NC_009767.1 TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; KEGG: rrs:RoseRS_3195 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 3786409 5540413 Rcas_2923 Roseiflexus castenholzii DSM 13941 molybdopterin converting factor subunit 1 YP_001433003.1 3785696 D 383372 CDS YP_001433004.1 156742875 5540414 complement(3786391..3788025) 1 NC_009767.1 KEGG: rrs:RoseRS_3196 hypothetical protein; hypothetical protein 3788025 5540414 Rcas_2924 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433004.1 3786391 R 383372 CDS YP_001433005.1 156742876 5540415 complement(3788091..3789488) 1 NC_009767.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rrs:RoseRS_3197 protein of unknown function DUF21; hypothetical protein 3789488 5540415 Rcas_2925 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433005.1 3788091 R 383372 CDS YP_001433006.1 156742877 5540416 complement(3790230..3790826) 1 NC_009767.1 KEGG: xom:XOO_3972 hypothetical protein; hypothetical protein 3790826 5540416 Rcas_2926 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433006.1 3790230 R 383372 CDS YP_001433007.1 156742878 5540417 3791235..3792221 1 NC_009767.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rrs:RoseRS_3199 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 3792221 5540417 Rcas_2927 Roseiflexus castenholzii DSM 13941 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001433007.1 3791235 D 383372 CDS YP_001433008.1 156742879 5540418 3792242..3793072 1 NC_009767.1 KEGG: rrs:RoseRS_3200 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 3793072 5540418 Rcas_2928 Roseiflexus castenholzii DSM 13941 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_001433008.1 3792242 D 383372 CDS YP_001433009.1 156742880 5540419 3793352..3797041 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KEGG: rrs:RoseRS_3201 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3797041 5540419 Rcas_2929 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433009.1 3793352 D 383372 CDS YP_001433010.1 156742881 5540420 3797073..3802811 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3202 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 3802811 5540420 Rcas_2930 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001433010.1 3797073 D 383372 CDS YP_001433011.1 156742882 5540421 3803096..3804460 1 NC_009767.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: rrs:RoseRS_3203 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 3804460 5540421 Rcas_2931 Roseiflexus castenholzii DSM 13941 acetyl-CoA carboxylase, biotin carboxylase YP_001433011.1 3803096 D 383372 CDS YP_001433012.1 156742883 5540422 3804665..3806212 1 NC_009767.1 PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_3204 aldehyde dehydrogenase; aldehyde dehydrogenase 3806212 5540422 Rcas_2932 Roseiflexus castenholzii DSM 13941 aldehyde dehydrogenase YP_001433012.1 3804665 D 383372 CDS YP_001433013.1 156742884 5540423 3806277..3807275 1 NC_009767.1 TIGRFAM: Quinone oxidoreductase YhdH/YhfP; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3205 alcohol dehydrogenase, zinc-binding domain protein; quinone oxidoreductase YhdH/YhfP 3807275 5540423 Rcas_2933 Roseiflexus castenholzii DSM 13941 quinone oxidoreductase YhdH/YhfP YP_001433013.1 3806277 D 383372 CDS YP_001433014.1 156742885 5540424 3807315..3809417 1 NC_009767.1 KEGG: rrs:RoseRS_3206 hypothetical protein; hypothetical protein 3809417 5540424 Rcas_2934 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433014.1 3807315 D 383372 CDS YP_001433015.1 156742886 5540425 complement(3809423..3811498) 1 NC_009767.1 PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_3207 peptidase S41; peptidase S41 3811498 5540425 Rcas_2935 Roseiflexus castenholzii DSM 13941 peptidase S41 YP_001433015.1 3809423 R 383372 CDS YP_001433016.1 156742887 5540427 complement(3812771..3813583) 1 NC_009767.1 PFAM: periplasmic binding protein; KEGG: rrs:RoseRS_3091 periplasmic binding protein; periplasmic binding protein 3813583 5540427 Rcas_2937 Roseiflexus castenholzii DSM 13941 periplasmic binding protein YP_001433016.1 3812771 R 383372 CDS YP_001433017.1 156742888 5540428 complement(3813729..3814124) 1 NC_009767.1 PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_3092 thioesterase superfamily protein; thioesterase superfamily protein 3814124 5540428 Rcas_2938 Roseiflexus castenholzii DSM 13941 thioesterase superfamily protein YP_001433017.1 3813729 R 383372 CDS YP_001433018.1 156742889 5540429 complement(3814121..3815014) 1 NC_009767.1 KEGG: rrs:RoseRS_3093 periplasmic binding protein; periplasmic binding protein 3815014 5540429 Rcas_2939 Roseiflexus castenholzii DSM 13941 periplasmic binding protein YP_001433018.1 3814121 R 383372 CDS YP_001433019.1 156742890 5540430 3815256..3816203 1 NC_009767.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rrs:RoseRS_3094 chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein 3816203 5540430 Rcas_2940 Roseiflexus castenholzii DSM 13941 chaperone DnaJ domain-containing protein YP_001433019.1 3815256 D 383372 CDS YP_001433020.1 156742891 5540431 3816548..3816874 1 NC_009767.1 KEGG: rrs:RoseRS_3095 hypothetical protein; hypothetical protein 3816874 5540431 Rcas_2941 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433020.1 3816548 D 383372 CDS YP_001433021.1 156742892 5540432 3816898..3817593 1 NC_009767.1 PFAM: Rhomboid family protein; KEGG: rrs:RoseRS_3096 rhomboid family protein; rhomboid family protein 3817593 5540432 Rcas_2942 Roseiflexus castenholzii DSM 13941 rhomboid family protein YP_001433021.1 3816898 D 383372 CDS YP_001433022.1 156742893 5540433 3817609..3818448 1 NC_009767.1 PFAM: protein of unknown function DUF114; KEGG: rrs:RoseRS_3097 protein of unknown function DUF114; hypothetical protein 3818448 5540433 Rcas_2943 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433022.1 3817609 D 383372 CDS YP_001433023.1 156742894 5540434 complement(3818850..3819227) 1 NC_009767.1 KEGG: rrs:RoseRS_3104 hypothetical protein; hypothetical protein 3819227 5540434 Rcas_2944 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433023.1 3818850 R 383372 CDS YP_001433024.1 156742895 5540435 complement(3819276..3820496) 1 NC_009767.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rrs:RoseRS_3105 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 3820496 5540435 Rcas_2945 Roseiflexus castenholzii DSM 13941 cobalamin synthesis protein P47K YP_001433024.1 3819276 R 383372 CDS YP_001433025.1 156742896 5540436 3821430..3823481 1 NC_009767.1 PFAM: Ig family protein; KEGG: rso:RSc0115 hemagglutinin-related protein; Ig family protein 3823481 5540436 Rcas_2946 Roseiflexus castenholzii DSM 13941 Ig family protein YP_001433025.1 3821430 D 383372 CDS YP_001433026.1 156742897 5540437 complement(3823663..3824166) 1 NC_009767.1 PFAM: glutathione peroxidase; KEGG: rrs:RoseRS_3106 glutathione peroxidase; glutathione peroxidase 3824166 5540437 Rcas_2947 Roseiflexus castenholzii DSM 13941 glutathione peroxidase YP_001433026.1 3823663 R 383372 CDS YP_001433027.1 156742898 5540438 3824316..3824558 1 NC_009767.1 TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: rrs:RoseRS_3107 regulatory protein, FmdB family; FmdB family regulatory protein 3824558 5540438 Rcas_2948 Roseiflexus castenholzii DSM 13941 FmdB family regulatory protein YP_001433027.1 3824316 D 383372 CDS YP_001433028.1 156742899 5540439 3824589..3825698 1 NC_009767.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rrs:RoseRS_3108 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 3825698 5540439 Rcas_2949 Roseiflexus castenholzii DSM 13941 cobalamin synthesis protein P47K YP_001433028.1 3824589 D 383372 CDS YP_001433029.1 156742900 5540440 complement(3826018..3829002) 1 NC_009767.1 KEGG: rrs:RoseRS_3141 hypothetical protein; hypothetical protein 3829002 5540440 Rcas_2950 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433029.1 3826018 R 383372 CDS YP_001433030.1 156742901 5540441 complement(3830423..3830674) 1 NC_009767.1 hypothetical protein 3830674 5540441 Rcas_2951 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433030.1 3830423 R 383372 CDS YP_001433031.1 156742902 5540442 complement(3830685..3830981) 1 NC_009767.1 PFAM: protein of unknown function DUF497; KEGG: rrs:RoseRS_0832 protein of unknown function DUF497; hypothetical protein 3830981 5540442 Rcas_2952 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433031.1 3830685 R 383372 CDS YP_001433032.1 156742903 5540444 complement(3831291..3833348) 1 NC_009767.1 PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; KEGG: cph:Cpha266_1063 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 3833348 5540444 Rcas_2954 Roseiflexus castenholzii DSM 13941 biotin/lipoyl attachment domain-containing protein YP_001433032.1 3831291 R 383372 CDS YP_001433033.1 156742904 5540445 complement(3833357..3834811) 1 NC_009767.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: cph:Cpha266_1064 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding 3834811 5540445 Rcas_2955 Roseiflexus castenholzii DSM 13941 carbamoyl-phosphate synthase L chain ATP-binding YP_001433033.1 3833357 R 383372 CDS YP_001433034.1 156742905 5540447 complement(3835558..3835989) 1 NC_009767.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3835989 fabZ 5540447 fabZ Roseiflexus castenholzii DSM 13941 (3R)-hydroxymyristoyl-ACP dehydratase YP_001433034.1 3835558 R 383372 CDS YP_001433035.1 156742906 5540448 3836383..3837570 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3121 glycosyl transferase, group 1; group 1 glycosyl transferase 3837570 5540448 Rcas_2957 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433035.1 3836383 D 383372 CDS YP_001433036.1 156742907 5540449 3838009..3839109 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3120 glycosyl transferase, group 1; group 1 glycosyl transferase 3839109 5540449 Rcas_2958 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433036.1 3838009 D 383372 CDS YP_001433037.1 156742908 5540450 3839281..3840177 1 NC_009767.1 PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_3119 peptidase C60, sortase A and B; peptidase C60 sortase A and B 3840177 5540450 Rcas_2959 Roseiflexus castenholzii DSM 13941 peptidase C60 sortase A and B YP_001433037.1 3839281 D 383372 CDS YP_001433038.1 156742909 5540451 3840391..3841452 1 NC_009767.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 3841452 recA 5540451 recA Roseiflexus castenholzii DSM 13941 recombinase A YP_001433038.1 3840391 D 383372 CDS YP_001433039.1 156742910 5540452 3841660..3842343 1 NC_009767.1 PFAM: regulatory protein RecX; KEGG: rrs:RoseRS_3117 regulatory protein RecX; regulatory protein RecX 3842343 5540452 Rcas_2961 Roseiflexus castenholzii DSM 13941 regulatory protein RecX YP_001433039.1 3841660 D 383372 CDS YP_001433040.1 156742911 5540453 3842363..3843025 1 NC_009767.1 KEGG: rrs:RoseRS_3116 Zn-dependent hydrolase of the beta-lactamase fold-like protein; Zn-dependent hydrolase 3843025 5540453 Rcas_2962 Roseiflexus castenholzii DSM 13941 Zn-dependent hydrolase YP_001433040.1 3842363 D 383372 CDS YP_001433041.1 156742912 5540454 3843245..3844912 1 NC_009767.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3844912 pyrG 5540454 pyrG Roseiflexus castenholzii DSM 13941 CTP synthetase YP_001433041.1 3843245 D 383372 CDS YP_001433042.1 156742913 5540456 3845860..3846279 1 NC_009767.1 KEGG: rrs:RoseRS_3147 hypothetical protein; hypothetical protein 3846279 5540456 Rcas_2965 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433042.1 3845860 D 383372 CDS YP_001433043.1 156742914 5540457 3846842..3847738 1 NC_009767.1 KEGG: rrs:RoseRS_3109 hypothetical protein; hypothetical protein 3847738 5540457 Rcas_2966 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433043.1 3846842 D 383372 CDS YP_001433044.1 156742915 5540458 complement(3847935..3850667) 1 NC_009767.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: rrs:RoseRS_3110 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 3850667 5540458 Rcas_2967 Roseiflexus castenholzii DSM 13941 phosphoenolpyruvate carboxylase YP_001433044.1 3847935 R 383372 CDS YP_001433045.1 156742916 5540459 complement(3850702..3852279) 1 NC_009767.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 3852279 5540459 Rcas_2968 Roseiflexus castenholzii DSM 13941 4-alpha-glucanotransferase YP_001433045.1 3850702 R 383372 CDS YP_001433046.1 156742917 5540460 3852395..3854119 1 NC_009767.1 TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Proprotein convertase P; KEGG: rrs:RoseRS_3112 conserved repeat domain; hypothetical protein 3854119 5540460 Rcas_2969 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433046.1 3852395 D 383372 CDS YP_001433047.1 156742918 5540461 3854116..3854619 1 NC_009767.1 TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rrs:RoseRS_3112 conserved repeat domain; hypothetical protein 3854619 5540461 Rcas_2970 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433047.1 3854116 D 383372 CDS YP_001433048.1 156742919 5540462 3854884..3856116 1 NC_009767.1 KEGG: rrs:RoseRS_3113 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; cysteine desulfurase 3856116 5540462 Rcas_2971 Roseiflexus castenholzii DSM 13941 cysteine desulfurase YP_001433048.1 3854884 D 383372 CDS YP_001433049.1 156742920 5540464 3856647..3857693 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_3114 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 3857693 5540464 Rcas_2972 Roseiflexus castenholzii DSM 13941 RpoD family RNA polymerase sigma factor YP_001433049.1 3856647 D 383372 CDS YP_001433050.1 156742921 5540467 3858579..3860228 1 NC_009767.1 KEGG: rrs:RoseRS_3152 O-antigen polymerase; O-antigen polymerase 3860228 5540467 Rcas_2975 Roseiflexus castenholzii DSM 13941 O-antigen polymerase YP_001433050.1 3858579 D 383372 CDS YP_001433051.1 156742922 5540468 complement(3860249..3860698) 1 NC_009767.1 PFAM: PilT protein domain protein; KEGG: rrs:RoseRS_3045 PilT protein domain protein; twitching motility protein PilT 3860698 5540468 Rcas_2976 Roseiflexus castenholzii DSM 13941 twitching motility protein PilT YP_001433051.1 3860249 R 383372 CDS YP_001433052.1 156742923 5540469 complement(3860676..3860888) 1 NC_009767.1 KEGG: rrs:RoseRS_3046 hypothetical protein; hypothetical protein 3860888 5540469 Rcas_2977 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433052.1 3860676 R 383372 CDS YP_001433053.1 156742924 5540470 complement(3860978..3862975) 1 NC_009767.1 KEGG: rrs:RoseRS_3154 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; helix-hairpin-helix motif; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 3862975 5540470 Rcas_2978 Roseiflexus castenholzii DSM 13941 excinuclease ABC subunit C YP_001433053.1 3860978 R 383372 CDS YP_001433054.1 156742925 5540471 3863087..3864766 1 NC_009767.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 3864766 5540471 Rcas_2979 Roseiflexus castenholzii DSM 13941 dihydroxy-acid dehydratase YP_001433054.1 3863087 D 383372 CDS YP_001433055.1 156742926 5540472 complement(3864907..3865611) 1 NC_009767.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 3865611 5540472 Rcas_2980 Roseiflexus castenholzii DSM 13941 ribose-5-phosphate isomerase A YP_001433055.1 3864907 R 383372 CDS YP_001433056.1 156742927 5540473 complement(3865625..3865999) 1 NC_009767.1 KEGG: rrs:RoseRS_2911 hypothetical protein; hypothetical protein 3865999 5540473 Rcas_2981 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433056.1 3865625 R 383372 CDS YP_001433057.1 156742928 5540474 complement(3866003..3866596) 1 NC_009767.1 PFAM: electron transport protein SCO1/SenC; KEGG: rrs:RoseRS_2912 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 3866596 5540474 Rcas_2982 Roseiflexus castenholzii DSM 13941 electron transport protein SCO1/SenC YP_001433057.1 3866003 R 383372 CDS YP_001433058.1 156742929 5540475 3866866..3867240 1 NC_009767.1 PFAM: ferredoxin; KEGG: rrs:RoseRS_2914 ferredoxin; ferredoxin 3867240 5540475 Rcas_2983 Roseiflexus castenholzii DSM 13941 ferredoxin YP_001433058.1 3866866 D 383372 CDS YP_001433059.1 156742930 5540476 complement(3868307..3870895) 1 NC_009767.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_2921 DEAD/DEAH box helicase domain protein; helicase superfamily protein 3870895 5540476 Rcas_2984 Roseiflexus castenholzii DSM 13941 helicase superfamily protein YP_001433059.1 3868307 R 383372 CDS YP_001433060.1 156742931 5540477 3871146..3871895 1 NC_009767.1 KEGG: rrs:RoseRS_2922 hypothetical protein; hypothetical protein 3871895 5540477 Rcas_2985 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433060.1 3871146 D 383372 CDS YP_001433061.1 156742932 5540478 3872571..3873224 1 NC_009767.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_2923 pyrimidine 5'-nucleotidase; pyrimidine 5'-nucleotidase 3873224 5540478 Rcas_2986 Roseiflexus castenholzii DSM 13941 pyrimidine 5'-nucleotidase YP_001433061.1 3872571 D 383372 CDS YP_001433062.1 156742933 5540479 complement(3873301..3874248) 1 NC_009767.1 PFAM: band 7 protein; KEGG: rrs:RoseRS_2924 band 7 protein; hypothetical protein 3874248 5540479 Rcas_2987 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433062.1 3873301 R 383372 CDS YP_001433063.1 156742934 5540480 3874745..3876472 1 NC_009767.1 TIGRFAM: polymorphic outer membrane protein; KEGG: rrs:RoseRS_2283 polymorphic outer membrane protein; polymorphic outer membrane protein 3876472 5540480 Rcas_2988 Roseiflexus castenholzii DSM 13941 polymorphic outer membrane protein YP_001433063.1 3874745 D 383372 CDS YP_001433064.1 156742935 5540481 complement(3876487..3876876) 1 NC_009767.1 KEGG: rrs:RoseRS_2282 hypothetical protein; hypothetical protein 3876876 5540481 Rcas_2989 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433064.1 3876487 R 383372 CDS YP_001433065.1 156742936 5540482 complement(3876888..3878978) 1 NC_009767.1 PFAM: protein of unknown function DUF255; KEGG: rrs:RoseRS_2279 protein of unknown function DUF255; hypothetical protein 3878978 5540482 Rcas_2990 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433065.1 3876888 R 383372 CDS YP_001433066.1 156742937 5540483 3879161..3879652 1 NC_009767.1 KEGG: rrs:RoseRS_2278 hypothetical protein; hypothetical protein 3879652 5540483 Rcas_2991 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433066.1 3879161 D 383372 CDS YP_001433067.1 156742938 5540484 3879913..3881607 1 NC_009767.1 PFAM: Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: rrs:RoseRS_2277 proline--tRNA ligase; proline--tRNA ligase 3881607 5540484 Rcas_2992 Roseiflexus castenholzii DSM 13941 proline--tRNA ligase YP_001433067.1 3879913 D 383372 CDS YP_001433068.1 156742939 5540485 complement(3881709..3882761) 1 NC_009767.1 PFAM: RNA methylase; Methyltransferase type 11; KEGG: rrs:RoseRS_2276 RNA methylase; RNA methylase 3882761 5540485 Rcas_2993 Roseiflexus castenholzii DSM 13941 RNA methylase YP_001433068.1 3881709 R 383372 CDS YP_001433069.1 156742940 5540490 3888161..3889456 1 NC_009767.1 PFAM: glycosyl transferase group 1; Glycosyltransferase 28 domain; Monogalactosyldiacylglycerol synthase; KEGG: rrs:RoseRS_2020 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 3889456 5540490 Rcas_2994 Roseiflexus castenholzii DSM 13941 monogalactosyldiacylglycerol synthase YP_001433069.1 3888161 D 383372 CDS YP_001433070.1 156742941 5540491 3889951..3890433 1 NC_009767.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: chy:CHY_0057 serine protease Do; PDZ/DHR/GLGF domain-containing protein 3890433 5540491 Rcas_2995 Roseiflexus castenholzii DSM 13941 PDZ/DHR/GLGF domain-containing protein YP_001433070.1 3889951 D 383372 CDS YP_001433071.1 156742942 5540492 3890430..3891059 1 NC_009767.1 KEGG: rrs:RoseRS_2022 hypothetical protein; hypothetical protein 3891059 5540492 Rcas_2996 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433071.1 3890430 D 383372 CDS YP_001433072.1 156742943 5540493 3891056..3892042 1 NC_009767.1 PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rrs:RoseRS_2023 prephenate dehydrogenase; prephenate dehydrogenase 3892042 5540493 Rcas_2997 Roseiflexus castenholzii DSM 13941 prephenate dehydrogenase YP_001433072.1 3891056 D 383372 CDS YP_001433073.1 156742944 5540494 3892054..3892458 1 NC_009767.1 PFAM: cobalamin B12-binding domain protein; KEGG: rrs:RoseRS_2024 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 3892458 5540494 Rcas_2998 Roseiflexus castenholzii DSM 13941 cobalamin B12-binding domain-containing protein YP_001433073.1 3892054 D 383372 CDS YP_001433074.1 156742945 5540495 3892463..3893413 1 NC_009767.1 KEGG: rrs:RoseRS_2025 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; LAO/AO transport system ATPase 3893413 5540495 Rcas_2999 Roseiflexus castenholzii DSM 13941 LAO/AO transport system ATPase YP_001433074.1 3892463 D 383372 CDS YP_001433075.1 156742946 5540496 3893518..3894036 1 NC_009767.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rrs:RoseRS_2026 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3894036 5540496 Rcas_3000 Roseiflexus castenholzii DSM 13941 metal dependent phosphohydrolase YP_001433075.1 3893518 D 383372 CDS YP_001433076.1 156742947 5540497 complement(3894042..3895193) 1 NC_009767.1 PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_2027 transcriptional regulator, GntR family; GntR family transcriptional regulator 3895193 5540497 Rcas_3001 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001433076.1 3894042 R 383372 CDS YP_001433077.1 156742948 5540498 complement(3895388..3899092) 1 NC_009767.1 KEGG: rrs:RoseRS_2028 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 3899092 5540498 Rcas_3002 Roseiflexus castenholzii DSM 13941 multi-sensor hybrid histidine kinase YP_001433077.1 3895388 R 383372 CDS YP_001433078.1 156742949 5540499 3899281..3899979 1 NC_009767.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rrs:RoseRS_2029 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 3899979 5540499 Rcas_3003 Roseiflexus castenholzii DSM 13941 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001433078.1 3899281 D 383372 CDS YP_001433079.1 156742950 5540500 3900122..3900799 1 NC_009767.1 KEGG: rrs:RoseRS_2030 hypothetical protein; hypothetical protein 3900799 5540500 Rcas_3004 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433079.1 3900122 D 383372 CDS YP_001433080.1 156742951 5540501 complement(3900803..3902212) 1 NC_009767.1 KEGG: rrs:RoseRS_2031 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase 3902212 5540501 Rcas_3005 Roseiflexus castenholzii DSM 13941 aspartate kinase YP_001433080.1 3900803 R 383372 CDS YP_001433081.1 156742952 5540502 complement(3902372..3903301) 1 NC_009767.1 PFAM: methylenetetrahydrofolate reductase; KEGG: rrs:RoseRS_2032 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 3903301 5540502 Rcas_3006 Roseiflexus castenholzii DSM 13941 methylenetetrahydrofolate reductase YP_001433081.1 3902372 R 383372 CDS YP_001433082.1 156742953 5540503 complement(3903323..3904138) 1 NC_009767.1 PFAM: UspA domain protein; KEGG: rrs:RoseRS_2033 UspA domain protein; UspA domain-containing protein 3904138 5540503 Rcas_3007 Roseiflexus castenholzii DSM 13941 UspA domain-containing protein YP_001433082.1 3903323 R 383372 CDS YP_001433083.1 156742954 5540504 complement(3904141..3905271) 1 NC_009767.1 KEGG: rrs:RoseRS_2034 hypothetical protein; hypothetical protein 3905271 5540504 Rcas_3008 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433083.1 3904141 R 383372 CDS YP_001433084.1 156742955 5540505 complement(3905253..3906158) 1 NC_009767.1 PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_2035 beta-lactamase domain protein; beta-lactamase domain-containing protein 3906158 5540505 Rcas_3009 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001433084.1 3905253 R 383372 CDS YP_001433085.1 156742956 5540506 complement(3906239..3906580) 1 NC_009767.1 KEGG: rrs:RoseRS_2036 hypothetical protein; hypothetical protein 3906580 5540506 Rcas_3010 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433085.1 3906239 R 383372 CDS YP_001433086.1 156742957 5540507 complement(3906682..3908460) 1 NC_009767.1 TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: rrs:RoseRS_2037 methionyl-tRNA synthetase; methionyl-tRNA synthetase 3908460 5540507 Rcas_3011 Roseiflexus castenholzii DSM 13941 methionyl-tRNA synthetase YP_001433086.1 3906682 R 383372 CDS YP_001433087.1 156742958 5540510 3910268..3910744 1 NC_009767.1 hypothetical protein 3910744 5540510 Rcas_3014 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433087.1 3910268 D 383372 CDS YP_001433088.1 156742959 5540511 3910731..3911159 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_4528 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3911159 5540511 Rcas_3015 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001433088.1 3910731 D 383372 CDS YP_001433089.1 156742960 5540512 3911152..3911547 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_4529 protein of unknown function DUF86; hypothetical protein 3911547 5540512 Rcas_3016 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433089.1 3911152 D 383372 CDS YP_001433090.1 156742961 5540513 3911826..3912512 1 NC_009767.1 KEGG: rrs:RoseRS_2040 hypothetical protein; hypothetical protein 3912512 5540513 Rcas_3017 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433090.1 3911826 D 383372 CDS YP_001433091.1 156742962 5540514 3912513..3913685 1 NC_009767.1 KEGG: rrs:RoseRS_2041 hypothetical protein; hypothetical protein 3913685 5540514 Rcas_3018 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433091.1 3912513 D 383372 CDS YP_001433092.1 156742963 5540515 3913694..3914653 1 NC_009767.1 KEGG: rrs:RoseRS_2042 hypothetical protein; hypothetical protein 3914653 5540515 Rcas_3019 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433092.1 3913694 D 383372 CDS YP_001433093.1 156742964 5540516 3914669..3915265 1 NC_009767.1 KEGG: rrs:RoseRS_2043 hypothetical protein; hypothetical protein 3915265 5540516 Rcas_3020 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433093.1 3914669 D 383372 CDS YP_001433094.1 156742965 5540517 3915262..3916992 1 NC_009767.1 PFAM: asparagine synthase; KEGG: rrs:RoseRS_2044 asparagine synthase; asparagine synthase 3916992 5540517 Rcas_3021 Roseiflexus castenholzii DSM 13941 asparagine synthase YP_001433094.1 3915262 D 383372 CDS YP_001433095.1 156742966 5540518 3917037..3918473 1 NC_009767.1 KEGG: rrs:RoseRS_2045 hypothetical protein; hypothetical protein 3918473 5540518 Rcas_3022 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433095.1 3917037 D 383372 CDS YP_001433096.1 156742967 5540519 complement(3918757..3919584) 1 NC_009767.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rrs:RoseRS_2046 dimethylmenaquinone methyltransferase; hypothetical protein 3919584 5540519 Rcas_3023 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433096.1 3918757 R 383372 CDS YP_001433097.1 156742968 5540520 complement(3919766..3920695) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2047 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3920695 5540520 Rcas_3024 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001433097.1 3919766 R 383372 CDS YP_001433098.1 156742969 5540521 3921028..3921843 1 NC_009767.1 KEGG: rrs:RoseRS_2048 hypothetical protein; hypothetical protein 3921843 5540521 Rcas_3025 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433098.1 3921028 D 383372 CDS YP_001433099.1 156742970 5540522 3922695..3923834 1 NC_009767.1 PFAM: protein of unknown function DUF100; KEGG: rrs:RoseRS_2049 protein of unknown function DUF100; hypothetical protein 3923834 5540522 Rcas_3026 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433099.1 3922695 D 383372 CDS YP_001433100.1 156742971 5540523 3924026..3924226 1 NC_009767.1 hypothetical protein 3924226 5540523 Rcas_3027 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433100.1 3924026 D 383372 CDS YP_001433101.1 156742972 5540524 complement(3924223..3924498) 1 NC_009767.1 KEGG: rrs:RoseRS_2050 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3924498 5540524 Rcas_3028 Roseiflexus castenholzii DSM 13941 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001433101.1 3924223 R 383372 CDS YP_001433102.1 156742973 5540525 complement(3924568..3925335) 1 NC_009767.1 KEGG: rrs:RoseRS_2052 hypothetical protein; hypothetical protein 3925335 5540525 Rcas_3029 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433102.1 3924568 R 383372 CDS YP_001433103.1 156742974 5540526 complement(3925498..3927432) 1 NC_009767.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_2053 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 3927432 5540526 Rcas_3030 Roseiflexus castenholzii DSM 13941 peptidase S9 prolyl oligopeptidase YP_001433103.1 3925498 R 383372 CDS YP_001433104.1 156742975 5540527 complement(3927464..3928705) 1 NC_009767.1 KEGG: rrs:RoseRS_2056 hypothetical protein; hypothetical protein 3928705 5540527 Rcas_3031 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433104.1 3927464 R 383372 CDS YP_001433105.1 156742976 5540528 3929299..3930828 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2057 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3930828 5540528 Rcas_3032 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001433105.1 3929299 D 383372 CDS YP_001433106.1 156742977 5540529 3930825..3932663 1 NC_009767.1 PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rrs:RoseRS_2058 citrate transporter; citrate transporter 3932663 5540529 Rcas_3033 Roseiflexus castenholzii DSM 13941 citrate transporter YP_001433106.1 3930825 D 383372 CDS YP_001433107.1 156742978 5540530 3932686..3933771 1 NC_009767.1 KEGG: rrs:RoseRS_2060 hypothetical protein; hypothetical protein 3933771 5540530 Rcas_3034 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433107.1 3932686 D 383372 CDS YP_001433108.1 156742979 5540531 3933793..3934440 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2061 hypothetical protein; metallophosphoesterase 3934440 5540531 Rcas_3035 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001433108.1 3933793 D 383372 CDS YP_001433109.1 156742980 5540532 3934440..3935408 1 NC_009767.1 KEGG: rrs:RoseRS_2062 hypothetical protein; hypothetical protein 3935408 5540532 Rcas_3036 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433109.1 3934440 D 383372 CDS YP_001433110.1 156742981 5540533 3935380..3936372 1 NC_009767.1 KEGG: rrs:RoseRS_2063 hypothetical protein; hypothetical protein 3936372 5540533 Rcas_3037 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433110.1 3935380 D 383372 CDS YP_001433111.1 156742982 5540535 complement(3937649..3940060) 1 NC_009767.1 KEGG: rrs:RoseRS_2630 hypothetical protein; hypothetical protein 3940060 5540535 Rcas_3039 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433111.1 3937649 R 383372 CDS YP_001433112.1 156742983 5540536 complement(3940165..3941940) 1 NC_009767.1 PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_2631 protein kinase; PASTA sensor-containing serine/threonine protein kinase 3941940 5540536 Rcas_3040 Roseiflexus castenholzii DSM 13941 PASTA sensor-containing serine/threonine protein kinase YP_001433112.1 3940165 R 383372 CDS YP_001433113.1 156742984 5540537 complement(3941947..3942453) 1 NC_009767.1 KEGG: rrs:RoseRS_2632 exonuclease-like protein; exonuclease-like protein 3942453 5540537 Rcas_3041 Roseiflexus castenholzii DSM 13941 exonuclease-like protein YP_001433113.1 3941947 R 383372 CDS YP_001433114.1 156742985 5540538 3942789..3943814 1 NC_009767.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rrs:RoseRS_2633 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 3943814 5540538 Rcas_3042 Roseiflexus castenholzii DSM 13941 inosine/uridine-preferring nucleoside hydrolase YP_001433114.1 3942789 D 383372 CDS YP_001433115.1 156742986 5540539 3943882..3946674 1 NC_009767.1 KEGG: rrs:RoseRS_2634 hypothetical protein; hypothetical protein 3946674 5540539 Rcas_3043 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433115.1 3943882 D 383372 CDS YP_001433116.1 156742987 5540540 complement(3947010..3947729) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2431 ABC transporter related; ABC transporter-like protein 3947729 5540540 Rcas_3044 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433116.1 3947010 R 383372 CDS YP_001433117.1 156742988 5540541 complement(3948008..3948616) 1 NC_009767.1 KEGG: rrs:RoseRS_2432 hypothetical protein; hypothetical protein 3948616 5540541 Rcas_3045 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433117.1 3948008 R 383372 CDS YP_001433118.1 156742989 5540542 complement(3948870..3950357) 1 NC_009767.1 PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2433 TPR repeat-containing protein; molecular chaperone DnaJ 3950357 5540542 Rcas_3046 Roseiflexus castenholzii DSM 13941 molecular chaperone DnaJ YP_001433118.1 3948870 R 383372 CDS YP_001433119.1 156742990 5540543 complement(3950360..3951187) 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_2434 FHA domain containing protein; FHA domain-containing protein 3951187 5540543 Rcas_3047 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001433119.1 3950360 R 383372 CDS YP_001433120.1 156742991 5540544 3951658..3952146 1 NC_009767.1 KEGG: rrs:RoseRS_2435 hypothetical protein; hypothetical protein 3952146 5540544 Rcas_3048 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433120.1 3951658 D 383372 CDS YP_001433121.1 156742992 5540545 complement(3952676..3953224) 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_2429 NUDIX hydrolase; NUDIX hydrolase 3953224 5540545 Rcas_3049 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001433121.1 3952676 R 383372 CDS YP_001433122.1 156742993 5540546 3953299..3954051 1 NC_009767.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: rrs:RoseRS_2428 peptidase C26; peptidase C26 3954051 5540546 Rcas_3050 Roseiflexus castenholzii DSM 13941 peptidase C26 YP_001433122.1 3953299 D 383372 CDS YP_001433123.1 156742994 5540547 complement(3954029..3954907) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2427 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3954907 5540547 Rcas_3051 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001433123.1 3954029 R 383372 CDS YP_001433124.1 156742995 5540548 complement(3954926..3956566) 1 NC_009767.1 PFAM: Amidohydrolase 3; KEGG: rrs:RoseRS_2426 amidohydrolase 3; amidohydrolase 3956566 5540548 Rcas_3052 Roseiflexus castenholzii DSM 13941 amidohydrolase YP_001433124.1 3954926 R 383372 CDS YP_001433125.1 156742996 5540549 3956680..3957723 1 NC_009767.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3957723 ruvB 5540549 ruvB Roseiflexus castenholzii DSM 13941 Holliday junction DNA helicase RuvB YP_001433125.1 3956680 D 383372 CDS YP_001433126.1 156742997 5540550 complement(3957724..3958191) 1 NC_009767.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: rrs:RoseRS_2424 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase 3958191 5540550 Rcas_3054 Roseiflexus castenholzii DSM 13941 methionine-R-sulfoxide reductase YP_001433126.1 3957724 R 383372 CDS YP_001433127.1 156742998 5540551 3958427..3959203 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2423 methyltransferase type 11; type 11 methyltransferase 3959203 5540551 Rcas_3055 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001433127.1 3958427 D 383372 CDS YP_001433128.1 156742999 5540552 3959469..3960140 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2422 methyltransferase type 11; type 11 methyltransferase 3960140 5540552 Rcas_3056 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001433128.1 3959469 D 383372 CDS YP_001433129.1 156743000 5540553 3960142..3960822 1 NC_009767.1 PFAM: SNARE associated Golgi protein; KEGG: rrs:RoseRS_2421 hypothetical protein; hypothetical protein 3960822 5540553 Rcas_3057 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433129.1 3960142 D 383372 CDS YP_001433130.1 156743001 5540554 complement(3960736..3961803) 1 NC_009767.1 KEGG: rrs:RoseRS_2420 hypothetical protein; hypothetical protein 3961803 5540554 Rcas_3058 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433130.1 3960736 R 383372 CDS YP_001433131.1 156743002 5540555 3961879..3962865 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2419 ABC transporter related; ABC transporter-like protein 3962865 5540555 Rcas_3059 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433131.1 3961879 D 383372 CDS YP_001433132.1 156743003 5540556 3962876..3963781 1 NC_009767.1 KEGG: rrs:RoseRS_2418 hypothetical protein; hypothetical protein 3963781 5540556 Rcas_3060 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433132.1 3962876 D 383372 CDS YP_001433133.1 156743004 5540557 complement(3963791..3964828) 1 NC_009767.1 PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_2417 conserved hypothetical protein 374; hypothetical protein 3964828 5540557 Rcas_3061 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433133.1 3963791 R 383372 CDS YP_001433134.1 156743005 5540558 complement(3964838..3965821) 1 NC_009767.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: rrs:RoseRS_2416 transketolase, central region; transketolase central region 3965821 5540558 Rcas_3062 Roseiflexus castenholzii DSM 13941 transketolase central region YP_001433134.1 3964838 R 383372 CDS YP_001433135.1 156743006 5540559 complement(3965902..3966903) 1 NC_009767.1 PFAM: dehydrogenase E1 component; KEGG: rrs:RoseRS_2415 pyruvate dehydrogenase (acetyl-transferring); pyruvate dehydrogenase 3966903 5540559 Rcas_3063 Roseiflexus castenholzii DSM 13941 pyruvate dehydrogenase YP_001433135.1 3965902 R 383372 CDS YP_001433136.1 156743007 5540560 complement(3966937..3968571) 1 NC_009767.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_2414 GAF sensor signal transduction histidine kinase; GAF sensor signal transduction histidine kinase 3968571 5540560 Rcas_3064 Roseiflexus castenholzii DSM 13941 GAF sensor signal transduction histidine kinase YP_001433136.1 3966937 R 383372 CDS YP_001433137.1 156743008 5540561 3968910..3970412 1 NC_009767.1 KEGG: rrs:RoseRS_2413 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3970412 5540561 Rcas_3065 Roseiflexus castenholzii DSM 13941 FAD dependent oxidoreductase YP_001433137.1 3968910 D 383372 CDS YP_001433138.1 156743009 5540562 3970412..3971233 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2412 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3971233 5540562 Rcas_3066 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433138.1 3970412 D 383372 CDS YP_001433139.1 156743010 5540563 3971609..3972205 1 NC_009767.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rrs:RoseRS_2411 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 3972205 5540563 Rcas_3067 Roseiflexus castenholzii DSM 13941 sigma 54 modulation protein/ribosomal protein S30EA YP_001433139.1 3971609 D 383372 CDS YP_001433140.1 156743011 5540564 complement(3972221..3973054) 1 NC_009767.1 PFAM: protein of unknown function DUF52; KEGG: rrs:RoseRS_2409 protein of unknown function DUF52; hypothetical protein 3973054 5540564 Rcas_3068 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433140.1 3972221 R 383372 CDS YP_001433141.1 156743012 5540565 3973705..3976053 1 NC_009767.1 KEGG: rrs:RoseRS_1013 hypothetical protein; hypothetical protein 3976053 5540565 Rcas_3069 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433141.1 3973705 D 383372 CDS YP_001433142.1 156743013 5540566 complement(3976292..3977311) 1 NC_009767.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: rrs:RoseRS_2408 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 3977311 5540566 Rcas_3070 Roseiflexus castenholzii DSM 13941 magnesium and cobalt transport protein CorA YP_001433142.1 3976292 R 383372 CDS YP_001433143.1 156743014 5540567 complement(3977313..3977975) 1 NC_009767.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rrs:RoseRS_2407 TrkA-N domain protein; TrkA domain-containing protein 3977975 5540567 Rcas_3071 Roseiflexus castenholzii DSM 13941 TrkA domain-containing protein YP_001433143.1 3977313 R 383372 CDS YP_001433144.1 156743015 5540568 complement(3977991..3978635) 1 NC_009767.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rrs:RoseRS_2406 TrkA-N domain protein; TrkA domain-containing protein 3978635 5540568 Rcas_3072 Roseiflexus castenholzii DSM 13941 TrkA domain-containing protein YP_001433144.1 3977991 R 383372 CDS YP_001433145.1 156743016 5540569 complement(3978645..3979586) 1 NC_009767.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: rrs:RoseRS_2405 ornithine carbamoyltransferase; ornithine carbamoyltransferase 3979586 5540569 Rcas_3073 Roseiflexus castenholzii DSM 13941 ornithine carbamoyltransferase YP_001433145.1 3978645 R 383372 CDS YP_001433146.1 156743017 5540570 complement(3979650..3980216) 1 NC_009767.1 KEGG: rrs:RoseRS_2404 protein of unknown function DUF820; hypothetical protein 3980216 5540570 Rcas_3074 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433146.1 3979650 R 383372 CDS YP_001433147.1 156743018 5540571 3981384..3982751 1 NC_009767.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 3982751 5540571 Rcas_3075 Roseiflexus castenholzii DSM 13941 argininosuccinate lyase YP_001433147.1 3981384 D 383372 CDS YP_001433148.1 156743019 5540572 complement(3983275..3985125) 1 NC_009767.1 KEGG: rrs:RoseRS_2402 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 3985125 5540572 Rcas_3076 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001433148.1 3983275 R 383372 CDS YP_001433149.1 156743020 5540573 complement(3985241..3985615) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: sat:SYN_01078 response regulator receiver domain; response regulator receiver protein 3985615 5540573 Rcas_3077 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001433149.1 3985241 R 383372 CDS YP_001433150.1 156743021 5540574 3985773..3986651 1 NC_009767.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rrs:RoseRS_2401 protein tyrosine phosphatase; protein tyrosine phosphatase 3986651 5540574 Rcas_3078 Roseiflexus castenholzii DSM 13941 protein tyrosine phosphatase YP_001433150.1 3985773 D 383372 CDS YP_001433151.1 156743022 5540575 3986948..3987628 1 NC_009767.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: rrs:RoseRS_2400 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase/fumarate reductase cytochrome b subunit 3987628 5540575 Rcas_3079 Roseiflexus castenholzii DSM 13941 succinate dehydrogenase/fumarate reductase cytochrome b subunit YP_001433151.1 3986948 D 383372 CDS YP_001433152.1 156743023 5540576 3987694..3989664 1 NC_009767.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3989664 sdhA 5540576 sdhA Roseiflexus castenholzii DSM 13941 succinate dehydrogenase flavoprotein subunit YP_001433152.1 3987694 D 383372 CDS YP_001433153.1 156743024 5540577 3989758..3990507 1 NC_009767.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2398 succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase/fumarate reductase iron-sulfur subunit 3990507 5540577 Rcas_3081 Roseiflexus castenholzii DSM 13941 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_001433153.1 3989758 D 383372 CDS YP_001433154.1 156743025 5540578 3991574..3994024 1 NC_009767.1 KEGG: rrs:RoseRS_2397 hypothetical protein; hypothetical protein 3994024 5540578 Rcas_3082 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433154.1 3991574 D 383372 CDS YP_001433155.1 156743026 5540579 complement(3994000..3995307) 1 NC_009767.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: rrs:RoseRS_2396 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 3995307 5540579 Rcas_3083 Roseiflexus castenholzii DSM 13941 UDP-glucose 6-dehydrogenase YP_001433155.1 3994000 R 383372 CDS YP_001433156.1 156743027 5540580 complement(3995304..3996248) 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_2395 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3996248 5540580 Rcas_3084 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001433156.1 3995304 R 383372 CDS YP_001433157.1 156743028 5540581 complement(3996347..3997393) 1 NC_009767.1 KEGG: rrs:RoseRS_2394 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 3997393 5540581 Rcas_3085 Roseiflexus castenholzii DSM 13941 signal peptide peptidase SppA, 36K type YP_001433157.1 3996347 R 383372 CDS YP_001433158.1 156743029 5540582 complement(3998794..4000791) 1 NC_009767.1 TIGRFAM: polymorphic outer membrane protein; KEGG: rrs:RoseRS_2393 polymorphic outer membrane protein; polymorphic outer membrane protein 4000791 5540582 Rcas_3086 Roseiflexus castenholzii DSM 13941 polymorphic outer membrane protein YP_001433158.1 3998794 R 383372 CDS YP_001433159.1 156743030 5540583 4001275..4002513 1 NC_009767.1 KEGG: rrs:RoseRS_2392 hypothetical protein; hypothetical protein 4002513 5540583 Rcas_3087 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433159.1 4001275 D 383372 CDS YP_001433160.1 156743031 5540584 complement(4002527..4003747) 1 NC_009767.1 PFAM: C-methyltransferase; KEGG: rrs:RoseRS_2391 methyltransferase type 12; C-methyltransferase 4003747 5540584 Rcas_3088 Roseiflexus castenholzii DSM 13941 C-methyltransferase YP_001433160.1 4002527 R 383372 CDS YP_001433161.1 156743032 5540585 complement(4003756..4004814) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: swi:Swit_2376 glycosyl transferase, group 1; group 1 glycosyl transferase 4004814 5540585 Rcas_3089 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433161.1 4003756 R 383372 CDS YP_001433162.1 156743033 5540586 complement(4004924..4007512) 1 NC_009767.1 PFAM: Fibronectin type III domain protein; KEGG: rrs:RoseRS_2388 fibronectin, type III domain protein; fibronectin type III domain-containing protein 4007512 5540586 Rcas_3090 Roseiflexus castenholzii DSM 13941 fibronectin type III domain-containing protein YP_001433162.1 4004924 R 383372 CDS YP_001433163.1 156743034 5540587 complement(4007782..4009002) 1 NC_009767.1 PFAM: C-methyltransferase; KEGG: rrs:RoseRS_2387 C-methyltransferase; C-methyltransferase 4009002 5540587 Rcas_3091 Roseiflexus castenholzii DSM 13941 C-methyltransferase YP_001433163.1 4007782 R 383372 CDS YP_001433164.1 156743035 5540588 complement(4009190..4010422) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: rrs:RoseRS_2386 C-methyltransferase; C-methyltransferase 4010422 5540588 Rcas_3092 Roseiflexus castenholzii DSM 13941 C-methyltransferase YP_001433164.1 4009190 R 383372 CDS YP_001433165.1 156743036 5540589 complement(4010444..4011496) 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_2385 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4011496 5540589 Rcas_3093 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001433165.1 4010444 R 383372 CDS YP_001433166.1 156743037 5540590 complement(4011549..4012319) 1 NC_009767.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_2384 glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 4012319 5540590 Rcas_3094 Roseiflexus castenholzii DSM 13941 glucose-1-phosphate cytidylyltransferase YP_001433166.1 4011549 R 383372 CDS YP_001433167.1 156743038 5540591 complement(4012316..4013278) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2383 glycosyl transferase, family 2; glycosyl transferase family protein 4013278 5540591 Rcas_3095 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433167.1 4012316 R 383372 CDS YP_001433168.1 156743039 5540592 complement(4013402..4014046) 1 NC_009767.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 4014046 5540592 Rcas_3096 Roseiflexus castenholzii DSM 13941 phosphoheptose isomerase YP_001433168.1 4013402 R 383372 CDS YP_001433169.1 156743040 5540593 complement(4014024..4015196) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2380 glycosyl transferase, group 1; group 1 glycosyl transferase 4015196 5540593 Rcas_3097 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433169.1 4014024 R 383372 CDS YP_001433170.1 156743041 5540594 complement(4015214..4016389) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2379 glycosyl transferase, group 1; group 1 glycosyl transferase 4016389 5540594 Rcas_3098 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433170.1 4015214 R 383372 CDS YP_001433171.1 156743042 5540595 complement(4016397..4017308) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2382 glycosyl transferase, family 2; glycosyl transferase family protein 4017308 5540595 Rcas_3099 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433171.1 4016397 R 383372 CDS YP_001433172.1 156743043 5540596 complement(4017335..4018312) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2378 glycosyl transferase, family 2; glycosyl transferase family protein 4018312 5540596 Rcas_3100 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433172.1 4017335 R 383372 CDS YP_001433173.1 156743044 5540597 complement(4018357..4019826) 1 NC_009767.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rrs:RoseRS_2377 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 4019826 5540597 Rcas_3101 Roseiflexus castenholzii DSM 13941 polysaccharide biosynthesis protein YP_001433173.1 4018357 R 383372 CDS YP_001433174.1 156743045 5540598 complement(4019886..4020785) 1 NC_009767.1 KEGG: rrs:RoseRS_2376 hypothetical protein; hypothetical protein 4020785 5540598 Rcas_3102 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433174.1 4019886 R 383372 CDS YP_001433175.1 156743046 5540599 complement(4020824..4022320) 1 NC_009767.1 PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_2375 O-antigen polymerase; O-antigen polymerase 4022320 5540599 Rcas_3103 Roseiflexus castenholzii DSM 13941 O-antigen polymerase YP_001433175.1 4020824 R 383372 CDS YP_001433176.1 156743047 5540600 complement(4022421..4023110) 1 NC_009767.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_2374 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 4023110 5540600 Rcas_3104 Roseiflexus castenholzii DSM 13941 lipopolysaccharide biosynthesis protein YP_001433176.1 4022421 R 383372 CDS YP_001433177.1 156743048 5540601 complement(4023107..4024372) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2373 glycosyl transferase, family 2; glycosyl transferase family protein 4024372 5540601 Rcas_3105 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433177.1 4023107 R 383372 CDS YP_001433178.1 156743049 5540602 complement(4024369..4025517) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2372 glycosyl transferase, group 1; group 1 glycosyl transferase 4025517 5540602 Rcas_3106 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433178.1 4024369 R 383372 CDS YP_001433179.1 156743050 5540603 complement(4025517..4026797) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2371 glycosyl transferase, group 1; group 1 glycosyl transferase 4026797 5540603 Rcas_3107 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433179.1 4025517 R 383372 CDS YP_001433180.1 156743051 5540604 complement(4026839..4027528) 1 NC_009767.1 PFAM: sugar transferase; KEGG: rrs:RoseRS_2370 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase 4027528 5540604 Rcas_3108 Roseiflexus castenholzii DSM 13941 UDP-phosphate galactose phosphotransferase YP_001433180.1 4026839 R 383372 CDS YP_001433181.1 156743052 5540605 complement(4027626..4028504) 1 NC_009767.1 KEGG: rrs:RoseRS_2369 diguanylate cyclase; diguanylate cyclase 4028504 5540605 Rcas_3109 Roseiflexus castenholzii DSM 13941 diguanylate cyclase YP_001433181.1 4027626 R 383372 CDS YP_001433182.1 156743053 5540606 complement(4028501..4029442) 1 NC_009767.1 KEGG: rrs:RoseRS_2368 hypothetical protein; hypothetical protein 4029442 5540606 Rcas_3110 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433182.1 4028501 R 383372 CDS YP_001433183.1 156743054 5540607 4029863..4030906 1 NC_009767.1 PFAM: sugar isomerase (SIS); KEGG: rrs:RoseRS_2367 glutamine--fructose-6-phosphate transaminase (isomerizing); glutamine--fructose-6-phosphate transaminase 4030906 5540607 Rcas_3111 Roseiflexus castenholzii DSM 13941 glutamine--fructose-6-phosphate transaminase YP_001433183.1 4029863 D 383372 CDS YP_001433184.1 156743055 5540608 complement(4031115..4031594) 1 NC_009767.1 PFAM: blue (type 1) copper domain protein; KEGG: rrs:RoseRS_2366 blue (type 1) copper domain protein; blue (type1) copper domain-containing protein 4031594 5540608 Rcas_3112 Roseiflexus castenholzii DSM 13941 blue (type1) copper domain-containing protein YP_001433184.1 4031115 R 383372 CDS YP_001433185.1 156743056 5540609 complement(4031764..4032348) 1 NC_009767.1 KEGG: rrs:RoseRS_2365 hypothetical protein; hypothetical protein 4032348 5540609 Rcas_3113 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433185.1 4031764 R 383372 CDS YP_001433186.1 156743057 5540610 4032564..4034498 1 NC_009767.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2364 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 4034498 5540610 Rcas_3114 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001433186.1 4032564 D 383372 CDS YP_001433187.1 156743058 5540611 complement(4034531..4034743) 1 NC_009767.1 hypothetical protein 4034743 5540611 Rcas_3115 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433187.1 4034531 R 383372 CDS YP_001433188.1 156743059 5540612 4034874..4036418 1 NC_009767.1 KEGG: rrs:RoseRS_2363 hypothetical protein; hypothetical protein 4036418 5540612 Rcas_3116 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433188.1 4034874 D 383372 CDS YP_001433189.1 156743060 5540613 4036422..4037507 1 NC_009767.1 PFAM: beta-lactamase; KEGG: rrs:RoseRS_2362 beta-lactamase; beta-lactamase 4037507 5540613 Rcas_3117 Roseiflexus castenholzii DSM 13941 beta-lactamase YP_001433189.1 4036422 D 383372 CDS YP_001433190.1 156743061 5540614 4037607..4038197 1 NC_009767.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: rrs:RoseRS_2361 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 4038197 5540614 Rcas_3118 Roseiflexus castenholzii DSM 13941 response regulator receiver/ANTAR domain-containing protein YP_001433190.1 4037607 D 383372 CDS YP_001433191.1 156743062 5540615 4038416..4038829 1 NC_009767.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: rrs:RoseRS_2360 chorismate mutase; chorismate mutase 4038829 5540615 Rcas_3119 Roseiflexus castenholzii DSM 13941 chorismate mutase YP_001433191.1 4038416 D 383372 CDS YP_001433192.1 156743063 5540616 4038966..4040117 1 NC_009767.1 KEGG: rrs:RoseRS_2359 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 4040117 5540616 Rcas_3120 Roseiflexus castenholzii DSM 13941 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001433192.1 4038966 D 383372 CDS YP_001433193.1 156743064 5540617 4040313..4042691 1 NC_009767.1 KEGG: rrs:RoseRS_2358 hypothetical protein; hypothetical protein 4042691 5540617 Rcas_3121 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433193.1 4040313 D 383372 CDS YP_001433194.1 156743065 5540618 4042927..4044105 1 NC_009767.1 KEGG: rrs:RoseRS_2357 hypothetical protein; hypothetical protein 4044105 5540618 Rcas_3122 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433194.1 4042927 D 383372 CDS YP_001433195.1 156743066 5540619 complement(4044113..4045474) 1 NC_009767.1 PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: rrs:RoseRS_2356 ASPIC/UnbV domain protein; ASPIC/UnbV domain-containing protein 4045474 5540619 Rcas_3123 Roseiflexus castenholzii DSM 13941 ASPIC/UnbV domain-containing protein YP_001433195.1 4044113 R 383372 CDS YP_001433196.1 156743067 5540620 complement(4045516..4046361) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2355 alpha/beta hydrolase fold; alpha/beta hydrolase 4046361 5540620 Rcas_3124 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001433196.1 4045516 R 383372 CDS YP_001433197.1 156743068 5540621 4046548..4049754 1 NC_009767.1 PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2354 transcriptional activator domain; transcriptional activator domain-containing protein 4049754 5540621 Rcas_3125 Roseiflexus castenholzii DSM 13941 transcriptional activator domain-containing protein YP_001433197.1 4046548 D 383372 CDS YP_001433198.1 156743069 5540622 complement(4050052..4051830) 1 NC_009767.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0494 ABC transporter related; ABC transporter-like protein 4051830 5540622 Rcas_3126 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433198.1 4050052 R 383372 CDS YP_001433199.1 156743070 5540623 complement(4051827..4053581) 1 NC_009767.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0495 ABC transporter related; ABC transporter-like protein 4053581 5540623 Rcas_3127 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433199.1 4051827 R 383372 CDS YP_001433200.1 156743071 5540624 4054029..4054835 1 NC_009767.1 KEGG: rrs:RoseRS_2352 hypothetical protein; hypothetical protein 4054835 5540624 Rcas_3128 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433200.1 4054029 D 383372 CDS YP_001433201.1 156743072 5540625 4054933..4056126 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2351 histidine kinase; histidine kinase 4056126 5540625 Rcas_3129 Roseiflexus castenholzii DSM 13941 histidine kinase YP_001433201.1 4054933 D 383372 CDS YP_001433202.1 156743073 5540626 complement(4056134..4056667) 1 NC_009767.1 PFAM: PspC domain protein; KEGG: rrs:RoseRS_2350 phage shock protein C, PspC; phage shock protein PspC 4056667 5540626 Rcas_3130 Roseiflexus castenholzii DSM 13941 phage shock protein PspC YP_001433202.1 4056134 R 383372 CDS YP_001433203.1 156743074 5540627 complement(4056764..4057867) 1 NC_009767.1 PFAM: cell cycle protein; KEGG: rrs:RoseRS_2349 cell cycle protein; cell cycle protein 4057867 5540627 Rcas_3131 Roseiflexus castenholzii DSM 13941 cell cycle protein YP_001433203.1 4056764 R 383372 CDS YP_001433204.1 156743075 5540628 complement(4057936..4059576) 1 NC_009767.1 PFAM: Polymorphic membrane protein Chlamydia; KEGG: rrs:RoseRS_2348 conserved repeat domain; polymorphic membrane protein 4059576 5540628 Rcas_3132 Roseiflexus castenholzii DSM 13941 polymorphic membrane protein YP_001433204.1 4057936 R 383372 CDS YP_001433205.1 156743076 5540631 4060134..4061123 1 NC_009767.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3261 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 4061123 5540631 Rcas_3133 Roseiflexus castenholzii DSM 13941 alcohol dehydrogenase YP_001433205.1 4060134 D 383372 CDS YP_001433206.1 156743077 5540632 complement(4061269..4061871) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_2347 response regulator receiver protein; response regulator receiver protein 4061871 5540632 Rcas_3134 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001433206.1 4061269 R 383372 CDS YP_001433207.1 156743078 5540633 complement(4061868..4065431) 1 NC_009767.1 TIGRFAM: PAS sensor protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2344 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor hybrid histidine kinase 4065431 5540633 Rcas_3135 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor hybrid histidine kinase YP_001433207.1 4061868 R 383372 CDS YP_001433208.1 156743079 5540634 complement(4065428..4068187) 1 NC_009767.1 KEGG: rrs:RoseRS_2343 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4068187 5540634 Rcas_3136 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001433208.1 4065428 R 383372 CDS YP_001433209.1 156743080 5540635 4068588..4068971 1 NC_009767.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: rrs:RoseRS_2342 large conductance mechanosensitive channel protein; large conductance mechanosensitive channel protein 4068971 5540635 Rcas_3137 Roseiflexus castenholzii DSM 13941 large conductance mechanosensitive channel protein YP_001433209.1 4068588 D 383372 CDS YP_001433210.1 156743081 5540636 4069069..4069779 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2341 glycosyl transferase, family 2; glycosyl transferase family protein 4069779 5540636 Rcas_3138 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433210.1 4069069 D 383372 CDS YP_001433211.1 156743082 5540637 4069776..4070480 1 NC_009767.1 PFAM: SNARE associated Golgi protein; KEGG: rrs:RoseRS_2340 hypothetical protein; hypothetical protein 4070480 5540637 Rcas_3139 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433211.1 4069776 D 383372 CDS YP_001433212.1 156743083 5540638 4070829..4071974 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2339 glycosyl transferase, group 1; group 1 glycosyl transferase 4071974 5540638 Rcas_3140 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433212.1 4070829 D 383372 CDS YP_001433213.1 156743084 5540639 4071971..4072693 1 NC_009767.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_2338 PHP C-terminal domain protein; phosphotransferase domain-containing protein 4072693 5540639 Rcas_3141 Roseiflexus castenholzii DSM 13941 phosphotransferase domain-containing protein YP_001433213.1 4071971 D 383372 CDS YP_001433214.1 156743085 5540640 4072871..4074361 1 NC_009767.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rrs:RoseRS_2337 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 4074361 5540640 Rcas_3142 Roseiflexus castenholzii DSM 13941 tRNA/rRNA methyltransferase SpoU YP_001433214.1 4072871 D 383372 CDS YP_001433215.1 156743086 5540641 complement(4074325..4075254) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2335 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4075254 5540641 Rcas_3143 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase fold protein YP_001433215.1 4074325 R 383372 CDS YP_001433216.1 156743087 5540642 complement(4075255..4076619) 1 NC_009767.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: rrs:RoseRS_2334 small GTP-binding protein; small GTP-binding protein 4076619 5540642 Rcas_3144 Roseiflexus castenholzii DSM 13941 small GTP-binding protein YP_001433216.1 4075255 R 383372 CDS YP_001433217.1 156743088 5540643 complement(4076762..4077241) 1 NC_009767.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52 hydrogen uptake protein; KEGG: rrs:RoseRS_2322 hydrogenase expression/formation protein; hydrogenase expression/formation protein 4077241 5540643 Rcas_3145 Roseiflexus castenholzii DSM 13941 hydrogenase expression/formation protein YP_001433217.1 4076762 R 383372 CDS YP_001433218.1 156743089 5540644 complement(4077347..4078123) 1 NC_009767.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: rrs:RoseRS_2321 Ni/Fe-hydrogenase, b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 4078123 5540644 Rcas_3146 Roseiflexus castenholzii DSM 13941 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001433218.1 4077347 R 383372 CDS YP_001433219.1 156743090 5540645 complement(4078132..4079844) 1 NC_009767.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: rrs:RoseRS_2320 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 4079844 5540645 Rcas_3147 Roseiflexus castenholzii DSM 13941 nickel-dependent hydrogenase large subunit YP_001433219.1 4078132 R 383372 CDS YP_001433220.1 156743091 5540646 complement(4079875..4081128) 1 NC_009767.1 KEGG: rrs:RoseRS_2319 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; hydrogenase (NiFe) small subunit HydA 4081128 5540646 Rcas_3148 Roseiflexus castenholzii DSM 13941 hydrogenase (NiFe) small subunit HydA YP_001433220.1 4079875 R 383372 CDS YP_001433221.1 156743092 5540647 complement(4081277..4082968) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2318 ABC transporter related; ABC transporter-like protein 4082968 5540647 Rcas_3149 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433221.1 4081277 R 383372 CDS YP_001433222.1 156743093 5540648 complement(4083451..4086297) 1 NC_009767.1 PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_2317 protein of unknown function DUF214; hypothetical protein 4086297 5540648 Rcas_3150 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433222.1 4083451 R 383372 CDS YP_001433223.1 156743094 5540649 complement(4086301..4087902) 1 NC_009767.1 PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_2316 secretion protein HlyD family protein; secretion protein HlyD family protein 4087902 5540649 Rcas_3151 Roseiflexus castenholzii DSM 13941 secretion protein HlyD family protein YP_001433223.1 4086301 R 383372 CDS YP_001433224.1 156743095 5540650 complement(4088059..4090971) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_2315 extracellular solute-binding protein, family 1; extracellular solute-binding protein 4090971 5540650 Rcas_3152 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001433224.1 4088059 R 383372 CDS YP_001433225.1 156743096 5540651 4091527..4094799 1 NC_009767.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S41; WD40 domain protein beta Propeller; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_2312 peptidase S41; peptidase S41 4094799 5540651 Rcas_3153 Roseiflexus castenholzii DSM 13941 peptidase S41 YP_001433225.1 4091527 D 383372 CDS YP_001433226.1 156743097 5540652 4094845..4095897 1 NC_009767.1 PFAM: Aldose 1-epimerase; KEGG: rrs:RoseRS_2311 aldose 1-epimerase; aldose 1-epimerase 4095897 5540652 Rcas_3154 Roseiflexus castenholzii DSM 13941 aldose 1-epimerase YP_001433226.1 4094845 D 383372 CDS YP_001433227.1 156743098 5540653 4096442..4096639 1 NC_009767.1 KEGG: rrs:RoseRS_2310 hypothetical protein; hypothetical protein 4096639 5540653 Rcas_3155 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433227.1 4096442 D 383372 CDS YP_001433228.1 156743099 5540654 4096646..4097638 1 NC_009767.1 KEGG: rrs:RoseRS_2309 hypothetical protein; hypothetical protein 4097638 5540654 Rcas_3156 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433228.1 4096646 D 383372 CDS YP_001433229.1 156743100 5540655 4097716..4098864 1 NC_009767.1 PFAM: CBS domain containing protein; peptidase M50; KEGG: rrs:RoseRS_2308 peptidase M50; peptidase M50 4098864 5540655 Rcas_3157 Roseiflexus castenholzii DSM 13941 peptidase M50 YP_001433229.1 4097716 D 383372 CDS YP_001433230.1 156743101 5540656 complement(4098956..4100293) 1 NC_009767.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2307 anti-sigma-factor antagonist; anti-sigma-factor antagonist 4100293 5540656 Rcas_3158 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001433230.1 4098956 R 383372 CDS YP_001433231.1 156743102 5540657 complement(4100353..4100925) 1 NC_009767.1 KEGG: rrs:RoseRS_2306 hypothetical protein; hypothetical protein 4100925 5540657 Rcas_3159 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433231.1 4100353 R 383372 CDS YP_001433232.1 156743103 5540658 complement(4101057..4101944) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_2305 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4101944 5540658 Rcas_3160 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001433232.1 4101057 R 383372 CDS YP_001433233.1 156743104 5540659 complement(4101938..4103983) 1 NC_009767.1 KEGG: rrs:RoseRS_2304 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; nitrogen specific signal transduction histidine kinase NtrB 4103983 5540659 Rcas_3161 Roseiflexus castenholzii DSM 13941 nitrogen specific signal transduction histidine kinase NtrB YP_001433233.1 4101938 R 383372 CDS YP_001433234.1 156743105 5540660 complement(4104282..4105046) 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2303 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4105046 5540660 Rcas_3162 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433234.1 4104282 R 383372 CDS YP_001433235.1 156743106 5540661 4105896..4106681 1 NC_009767.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_2302 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4106681 5540661 Rcas_3163 Roseiflexus castenholzii DSM 13941 enoyl-CoA hydratase/isomerase YP_001433235.1 4105896 D 383372 CDS YP_001433236.1 156743107 5540662 4106948..4108309 1 NC_009767.1 KEGG: rrs:RoseRS_2301 permease of the major facilitator superfamily-like protein; major facilitator superfamily permease 4108309 5540662 Rcas_3164 Roseiflexus castenholzii DSM 13941 major facilitator superfamily permease YP_001433236.1 4106948 D 383372 CDS YP_001433237.1 156743108 5540663 4108519..4109856 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2300 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 4109856 5540663 Rcas_3165 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001433237.1 4108519 D 383372 CDS YP_001433238.1 156743109 5540664 4109978..4110754 1 NC_009767.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rrs:RoseRS_2299 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta 4110754 5540664 Rcas_3166 Roseiflexus castenholzii DSM 13941 electron transfer flavoprotein subunit alpha/beta YP_001433238.1 4109978 D 383372 CDS YP_001433239.1 156743110 5540665 4110768..4111754 1 NC_009767.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_2298 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 4111754 5540665 Rcas_3167 Roseiflexus castenholzii DSM 13941 electron transfer flavoprotein subunit alpha YP_001433239.1 4110768 D 383372 CDS YP_001433240.1 156743111 5540666 4112260..4112694 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_2297 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 4112694 5540666 Rcas_3168 Roseiflexus castenholzii DSM 13941 anti-sigma regulatory factor YP_001433240.1 4112260 D 383372 CDS YP_001433241.1 156743112 5540667 4112691..4113269 1 NC_009767.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2296 stage II sporulation E family protein; Ser/Thr phosphatase 4113269 5540667 Rcas_3169 Roseiflexus castenholzii DSM 13941 Ser/Thr phosphatase YP_001433241.1 4112691 D 383372 CDS YP_001433242.1 156743113 5540668 4113290..4116025 1 NC_009767.1 KEGG: rrs:RoseRS_2295 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 4116025 5540668 Rcas_3170 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001433242.1 4113290 D 383372 CDS YP_001433243.1 156743114 5540669 4116578..4117726 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_2294 extracellular solute-binding protein, family 1; extracellular solute-binding protein 4117726 5540669 Rcas_3171 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001433243.1 4116578 D 383372 CDS YP_001433244.1 156743115 5540670 4117856..4119478 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2293 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4119478 5540670 Rcas_3172 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport systems inner membrane component YP_001433244.1 4117856 D 383372 CDS YP_001433245.1 156743116 5540671 complement(4119495..4120277) 1 NC_009767.1 KEGG: rrs:RoseRS_0260 hypothetical protein; hypothetical protein 4120277 5540671 Rcas_3173 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433245.1 4119495 R 383372 CDS YP_001433246.1 156743117 5540672 complement(4120519..4121070) 1 NC_009767.1 KEGG: pna:Pnap_2774 2-nitropropane dioxygenase, NPD; hypothetical protein 4121070 5540672 Rcas_3174 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433246.1 4120519 R 383372 CDS YP_001433247.1 156743118 5540673 4121214..4122470 1 NC_009767.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 4122470 5540673 Rcas_3175 Roseiflexus castenholzii DSM 13941 phosphoribosylamine--glycine ligase YP_001433247.1 4121214 D 383372 CDS YP_001433248.1 156743119 5540674 4122467..4123114 1 NC_009767.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: rrs:RoseRS_2693 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 4123114 5540674 Rcas_3176 Roseiflexus castenholzii DSM 13941 phosphoribosylglycinamide formyltransferase YP_001433248.1 4122467 D 383372 CDS YP_001433249.1 156743120 5540675 complement(4123430..4126345) 1 NC_009767.1 TIGRFAM: PAS sensor protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; GAF domain protein; PAS fold-4 domain protein; KEGG: rrs:RoseRS_2694 PAS/PAC sensor protein; GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase 4126345 5540675 Rcas_3177 Roseiflexus castenholzii DSM 13941 GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase YP_001433249.1 4123430 R 383372 CDS YP_001433250.1 156743121 5540676 complement(4127041..4127445) 1 NC_009767.1 KEGG: rrs:RoseRS_1706 methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein; methylglyoxal synthase 4127445 5540676 Rcas_3178 Roseiflexus castenholzii DSM 13941 methylglyoxal synthase YP_001433250.1 4127041 R 383372 CDS YP_001433251.1 156743122 5540677 4127782..4128630 1 NC_009767.1 KEGG: rrs:RoseRS_1705 hypothetical protein; hypothetical protein 4128630 5540677 Rcas_3179 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433251.1 4127782 D 383372 CDS YP_001433252.1 156743123 5540678 4128955..4130049 1 NC_009767.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_1704 peptidase M20; peptidase M20 4130049 5540678 Rcas_3180 Roseiflexus castenholzii DSM 13941 peptidase M20 YP_001433252.1 4128955 D 383372 CDS YP_001433253.1 156743124 5540679 complement(4130456..4131640) 1 NC_009767.1 KEGG: rrs:RoseRS_1703 hypothetical protein; hypothetical protein 4131640 5540679 Rcas_3181 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433253.1 4130456 R 383372 CDS YP_001433254.1 156743125 5540680 complement(4131826..4136076) 1 NC_009767.1 KEGG: rrs:RoseRS_1702 hypothetical protein; hypothetical protein 4136076 5540680 Rcas_3182 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433254.1 4131826 R 383372 CDS YP_001433255.1 156743126 5540681 4136573..4138189 1 NC_009767.1 PFAM: protein of unknown function DUF87; KEGG: rrs:RoseRS_1701 protein of unknown function DUF87; hypothetical protein 4138189 5540681 Rcas_3183 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433255.1 4136573 D 383372 CDS YP_001433256.1 156743127 5540682 complement(4138418..4140223) 1 NC_009767.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_3082 peptidase M61 domain protein; peptidase M61 domain-containing protein 4140223 5540682 Rcas_3184 Roseiflexus castenholzii DSM 13941 peptidase M61 domain-containing protein YP_001433256.1 4138418 R 383372 CDS YP_001433257.1 156743128 5540683 complement(4140284..4142200) 1 NC_009767.1 KEGG: rrs:RoseRS_3081 hypothetical protein; hypothetical protein 4142200 5540683 Rcas_3185 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433257.1 4140284 R 383372 CDS YP_001433258.1 156743129 5540684 4142639..4143679 1 NC_009767.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_3080 threonine synthase; threonine synthase 4143679 5540684 Rcas_3186 Roseiflexus castenholzii DSM 13941 threonine synthase YP_001433258.1 4142639 D 383372 CDS YP_001433259.1 156743130 5540685 4143699..4145102 1 NC_009767.1 KEGG: rrs:RoseRS_3079 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 4145102 5540685 Rcas_3187 Roseiflexus castenholzii DSM 13941 aspartate kinase YP_001433259.1 4143699 D 383372 CDS YP_001433260.1 156743131 5540686 4145378..4146436 1 NC_009767.1 KEGG: rrs:RoseRS_3078 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; aspartate-semialdehyde dehydrogenase 4146436 5540686 Rcas_3188 Roseiflexus castenholzii DSM 13941 aspartate-semialdehyde dehydrogenase YP_001433260.1 4145378 D 383372 CDS YP_001433261.1 156743132 5540687 4146762..4147655 1 NC_009767.1 PFAM: MCP methyltransferase CheR-type; Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mll3672 methyl transferase-like protein; chemotaxis protein CheR 4147655 5540687 Rcas_3189 Roseiflexus castenholzii DSM 13941 chemotaxis protein CheR YP_001433261.1 4146762 D 383372 CDS YP_001433262.1 156743133 5540688 complement(4147824..4149623) 1 NC_009767.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: rrs:RoseRS_3077 integral membrane protein MviN; integral membrane protein MviN 4149623 5540688 Rcas_3190 Roseiflexus castenholzii DSM 13941 integral membrane protein MviN YP_001433262.1 4147824 R 383372 CDS YP_001433263.1 156743134 5540689 4149985..4150191 1 NC_009767.1 PFAM: ribosomal protein S20; KEGG: rrs:RoseRS_3076 ribosomal protein S20; 30S ribosomal protein S20 4150191 5540689 Rcas_3191 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S20 YP_001433263.1 4149985 D 383372 CDS YP_001433264.1 156743135 5540690 complement(4150198..4151262) 1 NC_009767.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: rrs:RoseRS_3075 DNA polymerase III, delta subunit; DNA polymerase III subunit delta 4151262 5540690 Rcas_3192 Roseiflexus castenholzii DSM 13941 DNA polymerase III subunit delta YP_001433264.1 4150198 R 383372 CDS YP_001433265.1 156743136 5540691 complement(4151383..4152384) 1 NC_009767.1 PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_3074 aldo/keto reductase; aldo/keto reductase 4152384 5540691 Rcas_3193 Roseiflexus castenholzii DSM 13941 aldo/keto reductase YP_001433265.1 4151383 R 383372 CDS YP_001433266.1 156743137 5540692 4152862..4154586 1 NC_009767.1 KEGG: rrs:RoseRS_3073 hypothetical protein; hypothetical protein 4154586 5540692 Rcas_3194 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433266.1 4152862 D 383372 CDS YP_001433267.1 156743138 5540693 complement(4154693..4156084) 1 NC_009767.1 KEGG: rrs:RoseRS_0993 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing CheR-type MCP methyltransferase 4156084 5540693 Rcas_3195 Roseiflexus castenholzii DSM 13941 TPR repeat-containing CheR-type MCP methyltransferase YP_001433267.1 4154693 R 383372 CDS YP_001433268.1 156743139 5540694 complement(4156081..4157121) 1 NC_009767.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: rrs:RoseRS_0994 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase 4157121 5540694 Rcas_3196 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated CheB methylesterase YP_001433268.1 4156081 R 383372 CDS YP_001433269.1 156743140 5540695 complement(4157118..4157594) 1 NC_009767.1 PFAM: CheW domain protein; KEGG: rrs:RoseRS_0995 CheW protein; CheW protein 4157594 5540695 Rcas_3197 Roseiflexus castenholzii DSM 13941 CheW protein YP_001433269.1 4157118 R 383372 CDS YP_001433270.1 156743141 5540696 complement(4157587..4157958) 1 NC_009767.1 KEGG: rrs:RoseRS_0996 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 4157958 5540696 Rcas_3198 Roseiflexus castenholzii DSM 13941 anti-sigma regulatory factor YP_001433270.1 4157587 R 383372 CDS YP_001433271.1 156743142 5540697 complement(4157971..4158351) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_0997 response regulator receiver protein; response regulator receiver protein 4158351 5540697 Rcas_3199 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001433271.1 4157971 R 383372 CDS YP_001433272.1 156743143 5540698 complement(4158363..4160708) 1 NC_009767.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: rrs:RoseRS_0998 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase 4160708 5540698 Rcas_3200 Roseiflexus castenholzii DSM 13941 CheA signal transduction histidine kinase YP_001433272.1 4158363 R 383372 CDS YP_001433273.1 156743144 5540699 complement(4160726..4162552) 1 NC_009767.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rrs:RoseRS_0999 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4162552 5540699 Rcas_3201 Roseiflexus castenholzii DSM 13941 methyl-accepting chemotaxis sensory transducer YP_001433273.1 4160726 R 383372 CDS YP_001433274.1 156743145 5540700 complement(4162643..4163191) 1 NC_009767.1 PFAM: CheW domain protein; KEGG: rrs:RoseRS_1000 CheW protein; CheW protein 4163191 5540700 Rcas_3202 Roseiflexus castenholzii DSM 13941 CheW protein YP_001433274.1 4162643 R 383372 CDS YP_001433275.1 156743146 5540701 complement(4163559..4164698) 1 NC_009767.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 4164698 sucC 5540701 sucC Roseiflexus castenholzii DSM 13941 succinyl-CoA synthetase subunit beta YP_001433275.1 4163559 R 383372 CDS YP_001433276.1 156743147 5540702 complement(4164759..4165151) 1 NC_009767.1 KEGG: rrs:RoseRS_3931 hypothetical protein; hypothetical protein 4165151 5540702 Rcas_3204 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433276.1 4164759 R 383372 CDS YP_001433277.1 156743148 5540703 4165246..4165536 1 NC_009767.1 PFAM: PspC domain protein; KEGG: rrs:RoseRS_3932 phage shock protein C, PspC; phage shock protein PspC 4165536 5540703 Rcas_3205 Roseiflexus castenholzii DSM 13941 phage shock protein PspC YP_001433277.1 4165246 D 383372 CDS YP_001433278.1 156743149 5540704 complement(4165778..4166959) 1 NC_009767.1 KEGG: rrs:RoseRS_3911 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 4166959 5540704 Rcas_3206 Roseiflexus castenholzii DSM 13941 acetyl-CoA acetyltransferase YP_001433278.1 4165778 R 383372 CDS YP_001433279.1 156743150 5540705 complement(4166972..4170445) 1 NC_009767.1 PFAM: WD-40 repeat protein; KEGG: rrs:RoseRS_3910 WD-40 repeat protein; hypothetical protein 4170445 5540705 Rcas_3207 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433279.1 4166972 R 383372 CDS YP_001433280.1 156743151 5540706 complement(4170442..4172511) 1 NC_009767.1 KEGG: rrs:RoseRS_3909 hypothetical protein; hypothetical protein 4172511 5540706 Rcas_3208 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433280.1 4170442 R 383372 CDS YP_001433281.1 156743152 5540707 4172585..4176016 1 NC_009767.1 KEGG: rrs:RoseRS_3908 hypothetical protein; hypothetical protein 4176016 5540707 Rcas_3209 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433281.1 4172585 D 383372 CDS YP_001433282.1 156743153 5540708 4176061..4178190 1 NC_009767.1 KEGG: rrs:RoseRS_3907 hypothetical protein; hypothetical protein 4178190 5540708 Rcas_3210 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433282.1 4176061 D 383372 CDS YP_001433283.1 156743154 5540709 4179070..4179684 1 NC_009767.1 catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; phosphoserine phosphatase 4179684 thrH 5540709 thrH Roseiflexus castenholzii DSM 13941 phosphoserine phosphatase YP_001433283.1 4179070 D 383372 CDS YP_001433284.1 156743155 5540710 4179849..4180784 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3901 glycosyl transferase, family 2; glycosyl transferase family protein 4180784 5540710 Rcas_3212 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433284.1 4179849 D 383372 CDS YP_001433285.1 156743156 5540711 4180781..4181776 1 NC_009767.1 PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_3900 conserved hypothetical protein 374; hypothetical protein 4181776 5540711 Rcas_3213 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433285.1 4180781 D 383372 CDS YP_001433286.1 156743157 5540712 4182162..4182581 1 NC_009767.1 KEGG: rrs:RoseRS_3899 hypothetical protein; hypothetical protein 4182581 5540712 Rcas_3214 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433286.1 4182162 D 383372 CDS YP_001433287.1 156743158 5540713 4182606..4183595 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_3898 oxidoreductase domain protein; oxidoreductase domain-containing protein 4183595 5540713 Rcas_3215 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001433287.1 4182606 D 383372 CDS YP_001433288.1 156743159 5540714 4183607..4184569 1 NC_009767.1 PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_3897 aldo/keto reductase; aldo/keto reductase 4184569 5540714 Rcas_3216 Roseiflexus castenholzii DSM 13941 aldo/keto reductase YP_001433288.1 4183607 D 383372 CDS YP_001433289.1 156743160 5540715 4184874..4185839 1 NC_009767.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_3928 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 4185839 5540715 Rcas_3217 Roseiflexus castenholzii DSM 13941 GDP-mannose 4,6-dehydratase YP_001433289.1 4184874 D 383372 CDS YP_001433290.1 156743161 5540716 complement(4185828..4186472) 1 NC_009767.1 KEGG: rrs:RoseRS_3927 hypothetical protein; hypothetical protein 4186472 5540716 Rcas_3218 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433290.1 4185828 R 383372 CDS YP_001433291.1 156743162 5540717 complement(4186509..4187837) 1 NC_009767.1 PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_3926 aminotransferase class-III; class III aminotransferase 4187837 5540717 Rcas_3219 Roseiflexus castenholzii DSM 13941 class III aminotransferase YP_001433291.1 4186509 R 383372 CDS YP_001433292.1 156743163 5540718 complement(4187853..4191389) 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: RNA-processing protein HAT helix repeating-containing protein; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3925 tetratricopeptide TPR_2 repeat protein; hypothetical protein 4191389 5540718 Rcas_3220 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433292.1 4187853 R 383372 CDS YP_001433293.1 156743164 5540719 complement(4191394..4192725) 1 NC_009767.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rrs:RoseRS_3924 response regulator receiver modulated diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 4192725 5540719 Rcas_3221 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated diguanylate cyclase YP_001433293.1 4191394 R 383372 CDS YP_001433294.1 156743165 5540720 complement(4192816..4193760) 1 NC_009767.1 PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3923 PfkB domain protein; ribokinase-like domain-containing protein 4193760 5540720 Rcas_3222 Roseiflexus castenholzii DSM 13941 ribokinase-like domain-containing protein YP_001433294.1 4192816 R 383372 CDS YP_001433295.1 156743166 5540721 complement(4193744..4194916) 1 NC_009767.1 PFAM: band 7 protein; KEGG: rrs:RoseRS_3922 band 7 protein; hypothetical protein 4194916 5540721 Rcas_3223 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433295.1 4193744 R 383372 CDS YP_001433296.1 156743167 5540722 complement(4194917..4195870) 1 NC_009767.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3921 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 4195870 5540722 Rcas_3224 Roseiflexus castenholzii DSM 13941 alcohol dehydrogenase YP_001433296.1 4194917 R 383372 CDS YP_001433297.1 156743168 5540723 4196213..4197154 1 NC_009767.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: rrs:RoseRS_3920 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 4197154 5540723 Rcas_3225 Roseiflexus castenholzii DSM 13941 methionyl-tRNA formyltransferase YP_001433297.1 4196213 D 383372 CDS YP_001433298.1 156743169 5540724 complement(4197455..4197784) 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3919 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 4197784 5540724 Rcas_3226 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001433298.1 4197455 R 383372 CDS YP_001433299.1 156743170 5540725 complement(4197771..4198154) 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3918 HEPN domain protein; HEPN domain-containing protein 4198154 5540725 Rcas_3227 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001433299.1 4197771 R 383372 CDS YP_001433300.1 156743171 5540726 complement(4198165..4198785) 1 NC_009767.1 PFAM: protein of unknown function DUF37; KEGG: rrs:RoseRS_3917 protein of unknown function DUF37; hypothetical protein 4198785 5540726 Rcas_3228 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433300.1 4198165 R 383372 CDS YP_001433301.1 156743172 5540727 complement(4198812..4199321) 1 NC_009767.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: rrs:RoseRS_3916 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 4199321 5540727 Rcas_3229 Roseiflexus castenholzii DSM 13941 molybdenum cofactor synthesis domain-containing protein YP_001433301.1 4198812 R 383372 CDS YP_001433302.1 156743173 5540728 complement(4199728..4200261) 1 NC_009767.1 TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: rrs:RoseRS_3915 protein of unknown function, ATP binding; small GTP-binding protein 4200261 5540728 Rcas_3230 Roseiflexus castenholzii DSM 13941 small GTP-binding protein YP_001433302.1 4199728 R 383372 CDS YP_001433303.1 156743174 5540729 complement(4200275..4201030) 1 NC_009767.1 KEGG: rrs:RoseRS_3914 hypothetical protein; hypothetical protein 4201030 5540729 Rcas_3231 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433303.1 4200275 R 383372 CDS YP_001433304.1 156743175 5540730 complement(4201053..4201604) 1 NC_009767.1 KEGG: rrs:RoseRS_3913 hypothetical protein; hypothetical protein 4201604 5540730 Rcas_3232 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433304.1 4201053 R 383372 CDS YP_001433305.1 156743176 5540731 complement(4201787..4202158) 1 NC_009767.1 PFAM: Roadblock/LC7 family protein; KEGG: rrs:RoseRS_3912 roadblock/LC7 family protein; roadblock/LC7 family protein 4202158 5540731 Rcas_3233 Roseiflexus castenholzii DSM 13941 roadblock/LC7 family protein YP_001433305.1 4201787 R 383372 CDS YP_001433306.1 156743177 5540732 4202549..4204078 1 NC_009767.1 hypothetical protein 4204078 5540732 Rcas_3234 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433306.1 4202549 D 383372 CDS YP_001433307.1 156743178 5540733 complement(4204026..4204886) 1 NC_009767.1 PFAM: Abortive infection protein; KEGG: rrs:RoseRS_1918 abortive infection protein; abortive infection protein 4204886 5540733 Rcas_3235 Roseiflexus castenholzii DSM 13941 abortive infection protein YP_001433307.1 4204026 R 383372 CDS YP_001433308.1 156743179 5540734 4205224..4206666 1 NC_009767.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 4206666 5540734 Rcas_3236 Roseiflexus castenholzii DSM 13941 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001433308.1 4205224 D 383372 CDS YP_001433309.1 156743180 5540735 4206663..4207502 1 NC_009767.1 PFAM: Abortive infection protein; KEGG: rrs:RoseRS_1880 abortive infection protein; abortive infection protein 4207502 5540735 Rcas_3237 Roseiflexus castenholzii DSM 13941 abortive infection protein YP_001433309.1 4206663 D 383372 CDS YP_001433310.1 156743181 5540736 4207510..4208370 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1879 tetratricopeptide TPR_2 repeat protein; hypothetical protein 4208370 5540736 Rcas_3238 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433310.1 4207510 D 383372 CDS YP_001433311.1 156743182 5540737 4208527..4209219 1 NC_009767.1 KEGG: rrs:RoseRS_1878 hypothetical protein; hypothetical protein 4209219 5540737 Rcas_3239 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433311.1 4208527 D 383372 CDS YP_001433312.1 156743183 5540738 4209216..4210595 1 NC_009767.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1877 AAA ATPase, central domain protein; ATPase central domain-containing protein 4210595 5540738 Rcas_3240 Roseiflexus castenholzii DSM 13941 ATPase central domain-containing protein YP_001433312.1 4209216 D 383372 CDS YP_001433313.1 156743184 5540739 4210611..4212047 1 NC_009767.1 PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_1876 type II secretion system protein E; type II secretion system protein E 4212047 5540739 Rcas_3241 Roseiflexus castenholzii DSM 13941 type II secretion system protein E YP_001433313.1 4210611 D 383372 CDS YP_001433314.1 156743185 5540740 complement(4213110..4213817) 1 NC_009767.1 PFAM: phosphoribosyltransferase; KEGG: rrs:RoseRS_1875 amidophosphoribosyltransferase-like protein; phosphoribosyltransferase 4213817 5540740 Rcas_3242 Roseiflexus castenholzii DSM 13941 phosphoribosyltransferase YP_001433314.1 4213110 R 383372 CDS YP_001433315.1 156743186 5540741 complement(4214230..4215156) 1 NC_009767.1 PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_2143 beta-lactamase domain protein; beta-lactamase domain-containing protein 4215156 5540741 Rcas_3243 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001433315.1 4214230 R 383372 CDS YP_001433316.1 156743187 5540742 4216223..4218973 1 NC_009767.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_0991 glycoside hydrolase family 2, sugar binding; glycoside hydrolase family protein 4218973 5540742 Rcas_3244 Roseiflexus castenholzii DSM 13941 glycoside hydrolase family protein YP_001433316.1 4216223 D 383372 CDS YP_001433317.1 156743188 5540744 4222340..4222828 1 NC_009767.1 hypothetical protein 4222828 5540744 Rcas_3246 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433317.1 4222340 D 383372 CDS YP_001433318.1 156743189 5540745 4222936..4223664 1 NC_009767.1 hypothetical protein 4223664 5540745 Rcas_3247 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433318.1 4222936 D 383372 CDS YP_001433319.1 156743190 5540747 4224101..4224421 1 NC_009767.1 hypothetical protein 4224421 5540747 Rcas_3249 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433319.1 4224101 D 383372 CDS YP_001433320.1 156743191 5540748 4224438..4225493 1 NC_009767.1 KEGG: hma:rrnB0181 hypothetical protein; hypothetical protein 4225493 5540748 Rcas_3250 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433320.1 4224438 D 383372 CDS YP_001433321.1 156743192 5540749 4227305..4227763 1 NC_009767.1 PFAM: ATP-cone domain protein; KEGG: rrs:RoseRS_0989 ATP-cone domain protein; transcriptional regulator NrdR 4227763 nrdR 5540749 nrdR Roseiflexus castenholzii DSM 13941 transcriptional regulator NrdR YP_001433321.1 4227305 D 383372 CDS YP_001433322.1 156743193 5540750 4227779..4228672 1 NC_009767.1 PFAM: restriction endonuclease; KEGG: rrs:RoseRS_0988 restriction endonuclease; restriction endonuclease 4228672 5540750 Rcas_3252 Roseiflexus castenholzii DSM 13941 restriction endonuclease YP_001433322.1 4227779 D 383372 CDS YP_001433323.1 156743194 5540751 4228692..4229444 1 NC_009767.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0987 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 4229444 5540751 Rcas_3253 Roseiflexus castenholzii DSM 13941 3-oxoacyl-ACP reductase YP_001433323.1 4228692 D 383372 CDS YP_001433324.1 156743195 5540752 4229517..4229867 1 NC_009767.1 KEGG: rrs:RoseRS_0986 protein of unknown function DUF322; hypothetical protein 4229867 5540752 Rcas_3254 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433324.1 4229517 D 383372 CDS YP_001433325.1 156743196 5540753 4229860..4230288 1 NC_009767.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: rrs:RoseRS_0985 NusB antitermination factor; NusB antitermination factor 4230288 5540753 Rcas_3255 Roseiflexus castenholzii DSM 13941 NusB antitermination factor YP_001433325.1 4229860 D 383372 CDS YP_001433326.1 156743197 5540754 4230340..4230588 1 NC_009767.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 4230588 acpP 5540754 acpP Roseiflexus castenholzii DSM 13941 acyl carrier protein YP_001433326.1 4230340 D 383372 CDS YP_001433327.1 156743198 5540755 4230719..4231717 1 NC_009767.1 PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_0983 sec-independent translocation protein MttA/Hcf106; sec-independent translocation protein mttA/Hcf106 4231717 5540755 Rcas_3257 Roseiflexus castenholzii DSM 13941 sec-independent translocation protein mttA/Hcf106 YP_001433327.1 4230719 D 383372 CDS YP_001433328.1 156743199 5540756 4231730..4232665 1 NC_009767.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rrs:RoseRS_0982 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC 4232665 5540756 Rcas_3258 Roseiflexus castenholzii DSM 13941 Sec-independent protein translocase subunit TatC YP_001433328.1 4231730 D 383372 CDS YP_001433329.1 156743200 5540757 4232705..4233598 1 NC_009767.1 PFAM: ribosomal RNA methyltransferase; KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase; ribosomal RNA methyltransferase 4233598 5540757 Rcas_3259 Roseiflexus castenholzii DSM 13941 ribosomal RNA methyltransferase YP_001433329.1 4232705 D 383372 CDS YP_001433330.1 156743201 5540758 4234317..4235201 1 NC_009767.1 PFAM: peptidase M48 Ste24p; KEGG: rrs:RoseRS_1982 peptidase M48, Ste24p; peptidase M48 Ste24p 4235201 5540758 Rcas_3260 Roseiflexus castenholzii DSM 13941 peptidase M48 Ste24p YP_001433330.1 4234317 D 383372 CDS YP_001433331.1 156743202 5540759 4235292..4236683 1 NC_009767.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_1983 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 4236683 5540759 Rcas_3261 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001433331.1 4235292 D 383372 CDS YP_001433332.1 156743203 5540760 4236790..4237458 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1984 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4237458 5540760 Rcas_3262 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001433332.1 4236790 D 383372 CDS YP_001433333.1 156743204 5540761 complement(4237479..4238447) 1 NC_009767.1 PFAM: protein of unknown function DUF897; KEGG: rrs:RoseRS_1985 protein of unknown function DUF897; hypothetical protein 4238447 5540761 Rcas_3263 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433333.1 4237479 R 383372 CDS YP_001433334.1 156743205 5540762 4238566..4239279 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1986 methyltransferase type 11; type 11 methyltransferase 4239279 5540762 Rcas_3264 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001433334.1 4238566 D 383372 CDS YP_001433335.1 156743206 5540763 complement(4239489..4239746) 1 NC_009767.1 KEGG: rrs:RoseRS_1987 hypothetical protein; hypothetical protein 4239746 5540763 Rcas_3265 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433335.1 4239489 R 383372 CDS YP_001433336.1 156743207 5540764 4239986..4241143 1 NC_009767.1 KEGG: rrs:RoseRS_1988 tRNA-guanine transglycosylase, various specificities; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities 4241143 5540764 Rcas_3266 Roseiflexus castenholzii DSM 13941 tRNA-guanine transglycosylase, various specificities YP_001433336.1 4239986 D 383372 CDS YP_001433337.1 156743208 5540765 complement(4241525..4241758) 1 NC_009767.1 KEGG: rrs:RoseRS_1989 hypothetical protein; hypothetical protein 4241758 5540765 Rcas_3267 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433337.1 4241525 R 383372 CDS YP_001433338.1 156743209 5540766 4242288..4243862 1 NC_009767.1 PFAM: Alkaline phosphatase; KEGG: rrs:RoseRS_1990 alkaline phosphatase; alkaline phosphatase 4243862 5540766 Rcas_3268 Roseiflexus castenholzii DSM 13941 alkaline phosphatase YP_001433338.1 4242288 D 383372 CDS YP_001433339.1 156743210 5540767 complement(4244033..4244857) 1 NC_009767.1 PFAM: molybdopterin binding domain; KEGG: rrs:RoseRS_1991 molybdopterin binding domain; molybdopterin binding domain-containing protein 4244857 5540767 Rcas_3269 Roseiflexus castenholzii DSM 13941 molybdopterin binding domain-containing protein YP_001433339.1 4244033 R 383372 CDS YP_001433340.1 156743211 5540768 4245068..4245481 1 NC_009767.1 hypothetical protein 4245481 5540768 Rcas_3270 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433340.1 4245068 D 383372 CDS YP_001433341.1 156743212 5540770 complement(4246755..4248131) 1 NC_009767.1 PFAM: MOFRL domain protein; KEGG: rrs:RoseRS_1997 hydroxypyruvate reductase; hydroxypyruvate reductase 4248131 5540770 Rcas_3272 Roseiflexus castenholzii DSM 13941 hydroxypyruvate reductase YP_001433341.1 4246755 R 383372 CDS YP_001433342.1 156743213 5540771 complement(4248128..4249939) 1 NC_009767.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: rrs:RoseRS_1998 oligoendopeptidase, PepF/M3 family; pepF/M3 family oligoendopeptidase 4249939 5540771 Rcas_3273 Roseiflexus castenholzii DSM 13941 pepF/M3 family oligoendopeptidase YP_001433342.1 4248128 R 383372 CDS YP_001433343.1 156743214 5540772 complement(4250336..4251586) 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1999 tetratricopeptide TPR_2 repeat protein; hypothetical protein 4251586 5540772 Rcas_3274 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433343.1 4250336 R 383372 CDS YP_001433344.1 156743215 5540773 complement(4251750..4253009) 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1843 von Willebrand factor, type A; von Willebrand factor A 4253009 5540773 Rcas_3275 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001433344.1 4251750 R 383372 CDS YP_001433345.1 156743216 5540774 4253607..4255034 1 NC_009767.1 PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1844 protein kinase; serine/threonine kinase 4255034 5540774 Rcas_3276 Roseiflexus castenholzii DSM 13941 serine/threonine kinase YP_001433345.1 4253607 D 383372 CDS YP_001433346.1 156743217 5540775 4255038..4255838 1 NC_009767.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: rrs:RoseRS_1845 phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase I 4255838 5540775 Rcas_3277 Roseiflexus castenholzii DSM 13941 phosphoribosylformylglycinamidine synthase I YP_001433346.1 4255038 D 383372 CDS YP_001433347.1 156743218 5540776 complement(4257337..4258167) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: rrs:RoseRS_1846 extracellular solute-binding protein, family 3; extracellular solute-binding protein 4258167 5540776 Rcas_3278 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001433347.1 4257337 R 383372 CDS YP_001433348.1 156743219 5540777 4258350..4259012 1 NC_009767.1 KEGG: rrs:RoseRS_1847 hypothetical protein; hypothetical protein 4259012 5540777 Rcas_3279 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433348.1 4258350 D 383372 CDS YP_001433349.1 156743220 5540778 4259222..4261204 1 NC_009767.1 PFAM: peptidase M41; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1848 AAA ATPase, central domain protein; ATPase central domain-containing protein 4261204 5540778 Rcas_3280 Roseiflexus castenholzii DSM 13941 ATPase central domain-containing protein YP_001433349.1 4259222 D 383372 CDS YP_001433350.1 156743221 5540779 4261807..4262766 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: rrs:RoseRS_1853 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4262766 5540779 Rcas_3281 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001433350.1 4261807 D 383372 CDS YP_001433351.1 156743222 5540780 4262763..4263875 1 NC_009767.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_1852 nucleotidyl transferase; nucleotidyl transferase 4263875 5540780 Rcas_3282 Roseiflexus castenholzii DSM 13941 nucleotidyl transferase YP_001433351.1 4262763 D 383372 CDS YP_001433352.1 156743223 5540781 4263962..4265005 1 NC_009767.1 KEGG: rrs:RoseRS_1851 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 4265005 5540781 Rcas_3283 Roseiflexus castenholzii DSM 13941 glyceraldehyde-3-phosphate dehydrogenase YP_001433352.1 4263962 D 383372 CDS YP_001433353.1 156743224 5540782 complement(4265096..4265896) 1 NC_009767.1 KEGG: rrs:RoseRS_1850 hypothetical protein; hypothetical protein 4265896 5540782 Rcas_3284 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433353.1 4265096 R 383372 CDS YP_001433354.1 156743225 5540783 complement(4266206..4266745) 1 NC_009767.1 KEGG: rrs:RoseRS_1849 hypothetical protein; hypothetical protein 4266745 5540783 Rcas_3285 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433354.1 4266206 R 383372 CDS YP_001433355.1 156743226 5540784 complement(4267266..4268048) 1 NC_009767.1 KEGG: rrs:RoseRS_1854 hypothetical protein; hypothetical protein 4268048 5540784 Rcas_3286 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433355.1 4267266 R 383372 CDS YP_001433356.1 156743227 5540785 4268381..4268884 1 NC_009767.1 PFAM: Ferritin Dps family protein; KEGG: rrs:RoseRS_1855 ferroxidase; ferroxidase 4268884 5540785 Rcas_3287 Roseiflexus castenholzii DSM 13941 ferroxidase YP_001433356.1 4268381 D 383372 CDS YP_001433357.1 156743228 5540786 complement(4270864..4272114) 1 NC_009767.1 TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein DxTHG; KEGG: cyb:CYB_0843 CRISPR-associated protein, TM1812 family; CRISPR-associated TM1812 family protein 4272114 5540786 Rcas_3288 Roseiflexus castenholzii DSM 13941 CRISPR-associated TM1812 family protein YP_001433357.1 4270864 R 383372 CDS YP_001433358.1 156743229 5540787 complement(4272123..4274222) 1 NC_009767.1 KEGG: rrs:RoseRS_1856 hypothetical protein; hypothetical protein 4274222 5540787 Rcas_3289 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433358.1 4272123 R 383372 CDS YP_001433359.1 156743230 5540788 complement(4274685..4276784) 1 NC_009767.1 KEGG: rrs:RoseRS_1857 hypothetical protein; hypothetical protein 4276784 5540788 Rcas_3290 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433359.1 4274685 R 383372 CDS YP_001433360.1 156743231 5540789 complement(4276781..4277446) 1 NC_009767.1 KEGG: rrs:RoseRS_1858 hypothetical protein; hypothetical protein 4277446 5540789 Rcas_3291 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433360.1 4276781 R 383372 CDS YP_001433361.1 156743232 5540790 complement(4277443..4279311) 1 NC_009767.1 PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1859 protein of unknown function DUF324; hypothetical protein 4279311 5540790 Rcas_3292 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433361.1 4277443 R 383372 CDS YP_001433362.1 156743233 5540791 complement(4279315..4281645) 1 NC_009767.1 PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1860 protein of unknown function DUF324; hypothetical protein 4281645 5540791 Rcas_3293 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433362.1 4279315 R 383372 CDS YP_001433363.1 156743234 5540792 complement(4281642..4283270) 1 NC_009767.1 KEGG: rrs:RoseRS_1861 hypothetical protein; hypothetical protein 4283270 5540792 Rcas_3294 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433363.1 4281642 R 383372 CDS YP_001433364.1 156743235 5540793 complement(4283292..4285025) 1 NC_009767.1 KEGG: rrs:RoseRS_1862 hypothetical protein; hypothetical protein 4285025 5540793 Rcas_3295 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433364.1 4283292 R 383372 CDS YP_001433365.1 156743236 5540794 complement(4285180..4286058) 1 NC_009767.1 PFAM: regulatory protein LuxR; KEGG: rrs:RoseRS_1863 response regulator receiver protein; LuxR family transcriptional regulator 4286058 5540794 Rcas_3296 Roseiflexus castenholzii DSM 13941 LuxR family transcriptional regulator YP_001433365.1 4285180 R 383372 CDS YP_001433366.1 156743237 5540795 4286214..4287389 1 NC_009767.1 KEGG: rrs:RoseRS_1864 hypothetical protein; hypothetical protein 4287389 5540795 Rcas_3297 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433366.1 4286214 D 383372 CDS YP_001433367.1 156743238 5540796 4287700..4289205 1 NC_009767.1 TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; KEGG: rrs:RoseRS_1865 CRISPR-associated CXXC_CXXC protein Cst1; CRISPR-associated Cst1 family protein 4289205 5540796 Rcas_3298 Roseiflexus castenholzii DSM 13941 CRISPR-associated Cst1 family protein YP_001433367.1 4287700 D 383372 CDS YP_001433368.1 156743239 5540797 4289294..4290385 1 NC_009767.1 TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; KEGG: rrs:RoseRS_1866 CRISPR-associated autoregulator, DevR family; CRISPR-associated autoregulator DevR family protein 4290385 5540797 Rcas_3299 Roseiflexus castenholzii DSM 13941 CRISPR-associated autoregulator DevR family protein YP_001433368.1 4289294 D 383372 CDS YP_001433369.1 156743240 5540798 4290395..4291132 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: rrs:RoseRS_1867 CRISPR-associated protein Cas5 family; CRISPR-associated Cas5 family protein 4291132 5540798 Rcas_3300 Roseiflexus castenholzii DSM 13941 CRISPR-associated Cas5 family protein YP_001433369.1 4290395 D 383372 CDS YP_001433370.1 156743241 5540799 4291110..4293449 1 NC_009767.1 KEGG: rrs:RoseRS_1868 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; CRISPR-associated helicase Cas3 4293449 5540799 Rcas_3301 Roseiflexus castenholzii DSM 13941 CRISPR-associated helicase Cas3 YP_001433370.1 4291110 D 383372 CDS YP_001433371.1 156743242 5540800 4293456..4294412 1 NC_009767.1 KEGG: rrs:RoseRS_1869 hypothetical protein; hypothetical protein 4294412 5540800 Rcas_3302 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433371.1 4293456 D 383372 CDS YP_001433372.1 156743243 5540801 4295005..4296021 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: rrs:RoseRS_1870 CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein 4296021 5540801 Rcas_3303 Roseiflexus castenholzii DSM 13941 CRISPR-associated Cas1 family protein YP_001433372.1 4295005 D 383372 CDS YP_001433373.1 156743244 5540802 4296101..4296358 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: rrs:RoseRS_1871 CRISPR-associated protein Cas2; CRISPR-associated Cas2 family protein 4296358 5540802 Rcas_3304 Roseiflexus castenholzii DSM 13941 CRISPR-associated Cas2 family protein YP_001433373.1 4296101 D 383372 CDS YP_001433374.1 156743245 5540803 4296351..4296947 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: rrs:RoseRS_1872 CRISPR-associated protein Cas4; CRISPR-associated Cas4 family protein 4296947 5540803 Rcas_3305 Roseiflexus castenholzii DSM 13941 CRISPR-associated Cas4 family protein YP_001433374.1 4296351 D 383372 CDS YP_001433375.1 156743246 5540804 complement(4313548..4314819) 1 NC_009767.1 KEGG: rrs:RoseRS_3875 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 4314819 5540804 Rcas_3306 Roseiflexus castenholzii DSM 13941 oxygen-independent coproporphyrinogen III oxidase YP_001433375.1 4313548 R 383372 CDS YP_001433376.1 156743247 5540805 4315115..4318126 1 NC_009767.1 KEGG: rrs:RoseRS_3876 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; CHASE4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 4318126 5540805 Rcas_3307 Roseiflexus castenholzii DSM 13941 multi-sensor hybrid histidine kinase YP_001433376.1 4315115 D 383372 CDS YP_001433377.1 156743248 5540806 4318147..4318539 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3877 response regulator receiver protein; response regulator receiver protein 4318539 5540806 Rcas_3308 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001433377.1 4318147 D 383372 CDS YP_001433378.1 156743249 5540807 4318599..4321301 1 NC_009767.1 KEGG: rrs:RoseRS_3878 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4321301 5540807 Rcas_3309 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001433378.1 4318599 D 383372 CDS YP_001433379.1 156743250 5540808 4321333..4322139 1 NC_009767.1 KEGG: rrs:RoseRS_3879 hypothetical protein; hypothetical protein 4322139 5540808 Rcas_3310 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433379.1 4321333 D 383372 CDS YP_001433380.1 156743251 5540809 complement(4322170..4322511) 1 NC_009767.1 KEGG: rrs:RoseRS_3881 hypothetical protein; hypothetical protein 4322511 5540809 Rcas_3311 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433380.1 4322170 R 383372 CDS YP_001433381.1 156743252 5540810 4322582..4323610 1 NC_009767.1 PFAM: peptidase M19 renal dipeptidase; KEGG: rrs:RoseRS_3883 membrane dipeptidase; membrane dipeptidase 4323610 5540810 Rcas_3312 Roseiflexus castenholzii DSM 13941 membrane dipeptidase YP_001433381.1 4322582 D 383372 CDS YP_001433382.1 156743253 5540811 4323768..4324556 1 NC_009767.1 PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_3884 nucleotidyl transferase; nucleotidyl transferase 4324556 5540811 Rcas_3313 Roseiflexus castenholzii DSM 13941 nucleotidyl transferase YP_001433382.1 4323768 D 383372 CDS YP_001433383.1 156743254 5540812 complement(4325999..4327501) 1 NC_009767.1 KEGG: rrs:RoseRS_3885 hypothetical protein; hypothetical protein 4327501 5540812 Rcas_3314 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433383.1 4325999 R 383372 CDS YP_001433384.1 156743255 5540813 4327693..4329105 1 NC_009767.1 PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rrs:RoseRS_3886 phosphate butyryltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 4329105 5540813 Rcas_3315 Roseiflexus castenholzii DSM 13941 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_001433384.1 4327693 D 383372 CDS YP_001433385.1 156743256 5540814 complement(4329136..4329492) 1 NC_009767.1 KEGG: rrs:RoseRS_3887 hypothetical protein; hypothetical protein 4329492 5540814 Rcas_3316 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433385.1 4329136 R 383372 CDS YP_001433386.1 156743257 5540815 4331550..4332833 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3888 major facilitator superfamily MFS_1; major facilitator transporter 4332833 5540815 Rcas_3317 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001433386.1 4331550 D 383372 CDS YP_001433387.1 156743258 5540816 4332836..4333426 1 NC_009767.1 PFAM: protein of unknown function DUF45; KEGG: rrs:RoseRS_3889 protein of unknown function DUF45; hypothetical protein 4333426 5540816 Rcas_3318 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433387.1 4332836 D 383372 CDS YP_001433388.1 156743259 5540817 4333498..4334787 1 NC_009767.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_3989 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 4334787 5540817 Rcas_3319 Roseiflexus castenholzii DSM 13941 peptidase S8/S53 subtilisin kexin sedolisin YP_001433388.1 4333498 D 383372 CDS YP_001433389.1 156743260 5540818 4334784..4335197 1 NC_009767.1 KEGG: rrs:RoseRS_3988 hypothetical protein; hypothetical protein 4335197 5540818 Rcas_3320 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433389.1 4334784 D 383372 CDS YP_001433390.1 156743261 5540820 complement(4335437..4336129) 1 NC_009767.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: rrs:RoseRS_3986 FeoA family protein; DtxR family iron dependent repressor 4336129 5540820 Rcas_3322 Roseiflexus castenholzii DSM 13941 DtxR family iron dependent repressor YP_001433390.1 4335437 R 383372 CDS YP_001433391.1 156743262 5540821 4336197..4337285 1 NC_009767.1 KEGG: rrs:RoseRS_3985 metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; metalloendopeptidase 4337285 5540821 Rcas_3323 Roseiflexus castenholzii DSM 13941 metalloendopeptidase YP_001433391.1 4336197 D 383372 CDS YP_001433392.1 156743263 5540822 4337611..4338345 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_3984 methyltransferase type 11; type 11 methyltransferase 4338345 5540822 Rcas_3324 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001433392.1 4337611 D 383372 CDS YP_001433393.1 156743264 5540823 complement(4338358..4339332) 1 NC_009767.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rrs:RoseRS_3983 protein-export membrane protein SecF; protein-export membrane protein SecF 4339332 5540823 Rcas_3325 Roseiflexus castenholzii DSM 13941 protein-export membrane protein SecF YP_001433393.1 4338358 R 383372 CDS YP_001433394.1 156743265 5540824 complement(4339353..4340777) 1 NC_009767.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rrs:RoseRS_3982 protein-export membrane protein SecD; protein-export membrane protein SecD 4340777 5540824 Rcas_3326 Roseiflexus castenholzii DSM 13941 protein-export membrane protein SecD YP_001433394.1 4339353 R 383372 CDS YP_001433395.1 156743266 5540825 complement(4341001..4341768) 1 NC_009767.1 PFAM: DSBA oxidoreductase; KEGG: rrs:RoseRS_3981 DsbA oxidoreductase; DSBA oxidoreductase 4341768 5540825 Rcas_3327 Roseiflexus castenholzii DSM 13941 DSBA oxidoreductase YP_001433395.1 4341001 R 383372 CDS YP_001433396.1 156743267 5540826 4342132..4345332 1 NC_009767.1 KEGG: rrs:RoseRS_3980 non-specific serine/threonine protein kinase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; non-specific serine/threonine protein kinase 4345332 5540826 Rcas_3328 Roseiflexus castenholzii DSM 13941 non-specific serine/threonine protein kinase YP_001433396.1 4342132 D 383372 CDS YP_001433397.1 156743268 5540827 4345325..4346686 1 NC_009767.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: rrs:RoseRS_3979 peptidase M14, carboxypeptidase A; peptidase M14 carboxypeptidase A 4346686 5540827 Rcas_3329 Roseiflexus castenholzii DSM 13941 peptidase M14 carboxypeptidase A YP_001433397.1 4345325 D 383372 CDS YP_001433398.1 156743269 5540828 4346693..4347220 1 NC_009767.1 PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_1012 phosphoglycerate mutase; phosphoglycerate mutase 4347220 5540828 Rcas_3330 Roseiflexus castenholzii DSM 13941 phosphoglycerate mutase YP_001433398.1 4346693 D 383372 CDS YP_001433399.1 156743270 5540829 4347661..4348410 1 NC_009767.1 KEGG: rrs:RoseRS_1011 hypothetical protein; hypothetical protein 4348410 5540829 Rcas_3331 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433399.1 4347661 D 383372 CDS YP_001433400.1 156743271 5540830 complement(4348343..4349236) 1 NC_009767.1 PFAM: HhH-GPD family protein; KEGG: rrs:RoseRS_1010 HhH-GPD family protein; HhH-GPD family protein 4349236 5540830 Rcas_3332 Roseiflexus castenholzii DSM 13941 HhH-GPD family protein YP_001433400.1 4348343 R 383372 CDS YP_001433401.1 156743272 5540831 complement(4349233..4350789) 1 NC_009767.1 KEGG: rrs:RoseRS_1009 hypothetical protein; hypothetical protein 4350789 5540831 Rcas_3333 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433401.1 4349233 R 383372 CDS YP_001433402.1 156743273 5540832 complement(4350878..4351042) 1 NC_009767.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 4351042 rpmG 5540832 rpmG Roseiflexus castenholzii DSM 13941 50S ribosomal protein L33 YP_001433402.1 4350878 R 383372 CDS YP_001433403.1 156743274 5540833 4351226..4352764 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_1007 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 4352764 5540833 Rcas_3335 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001433403.1 4351226 D 383372 CDS YP_001433404.1 156743275 5540834 complement(4352886..4353665) 1 NC_009767.1 TIGRFAM: thioredoxin; PFAM: glutaredoxin 2; Redoxin domain protein; Thioredoxin domain; KEGG: rrs:RoseRS_1006 thioredoxin; thioredoxin 4353665 5540834 Rcas_3336 Roseiflexus castenholzii DSM 13941 thioredoxin YP_001433404.1 4352886 R 383372 CDS YP_001433405.1 156743276 5540835 complement(4353742..4355955) 1 NC_009767.1 KEGG: rrs:RoseRS_3896 hypothetical protein; hypothetical protein 4355955 5540835 Rcas_3337 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433405.1 4353742 R 383372 CDS YP_001433406.1 156743277 5540836 complement(4356330..4356812) 1 NC_009767.1 KEGG: rrs:RoseRS_3895 hypothetical protein; hypothetical protein 4356812 5540836 Rcas_3338 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433406.1 4356330 R 383372 CDS YP_001433407.1 156743278 5540837 4356918..4358135 1 NC_009767.1 PFAM: conserved hypothetical protein; (Uracil-5)-methyltransferase; KEGG: rrs:RoseRS_3894 (uracil-5)-methyltransferase; (uracil-5)-methyltransferase 4358135 5540837 Rcas_3339 Roseiflexus castenholzii DSM 13941 (uracil-5)-methyltransferase YP_001433407.1 4356918 D 383372 CDS YP_001433408.1 156743279 5540838 4358681..4360153 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3893 protein kinase; serine/threonine protein kinase 4360153 5540838 Rcas_3340 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001433408.1 4358681 D 383372 CDS YP_001433409.1 156743280 5540839 4360428..4360898 1 NC_009767.1 KEGG: rrs:RoseRS_3891 hypothetical protein; hypothetical protein 4360898 5540839 Rcas_3341 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433409.1 4360428 D 383372 CDS YP_001433410.1 156743281 5540840 complement(4360911..4361339) 1 NC_009767.1 KEGG: rrs:RoseRS_3890 hypothetical protein; hypothetical protein 4361339 5540840 Rcas_3342 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433410.1 4360911 R 383372 CDS YP_001433411.1 156743282 5540842 complement(4362230..4363141) 1 NC_009767.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; Shikimate/quinate 5-dehydrogenase; KEGG: rrs:RoseRS_3990 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 4363141 5540842 Rcas_3343 Roseiflexus castenholzii DSM 13941 6-phosphogluconate dehydrogenase YP_001433411.1 4362230 R 383372 CDS YP_001433412.1 156743283 5540843 4363320..4364681 1 NC_009767.1 KEGG: rrs:RoseRS_3991 hypothetical protein; hypothetical protein 4364681 5540843 Rcas_3344 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433412.1 4363320 D 383372 CDS YP_001433413.1 156743284 5540844 4364674..4366668 1 NC_009767.1 KEGG: rrs:RoseRS_3992 hypothetical protein; hypothetical protein 4366668 5540844 Rcas_3345 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433413.1 4364674 D 383372 CDS YP_001433414.1 156743285 5540845 complement(4366773..4367285) 1 NC_009767.1 hypothetical protein 4367285 5540845 Rcas_3346 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433414.1 4366773 R 383372 CDS YP_001433415.1 156743286 5540846 complement(4367337..4369226) 1 NC_009767.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mxa:MXAN_0560 penicillin-resistant dd-carboxypeptidase; peptidoglycan binding domain-containing protein 4369226 5540846 Rcas_3347 Roseiflexus castenholzii DSM 13941 peptidoglycan binding domain-containing protein YP_001433415.1 4367337 R 383372 CDS YP_001433416.1 156743287 5540847 4369623..4371668 1 NC_009767.1 KEGG: rrs:RoseRS_3993 PKD domain containing protein; PKD domain-containing protein 4371668 5540847 Rcas_3348 Roseiflexus castenholzii DSM 13941 PKD domain-containing protein YP_001433416.1 4369623 D 383372 CDS YP_001433417.1 156743288 5540848 4371865..4374093 1 NC_009767.1 KEGG: rrs:RoseRS_3994 hypothetical protein; hypothetical protein 4374093 5540848 Rcas_3349 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433417.1 4371865 D 383372 CDS YP_001433418.1 156743289 5540849 complement(4374099..4374587) 1 NC_009767.1 KEGG: rrs:RoseRS_3995 hypothetical protein; hypothetical protein 4374587 5540849 Rcas_3350 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433418.1 4374099 R 383372 CDS YP_001433419.1 156743290 5540850 complement(4375206..4377218) 1 NC_009767.1 KEGG: rrs:RoseRS_4063 hypothetical protein; hypothetical protein 4377218 5540850 Rcas_3351 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433419.1 4375206 R 383372 CDS YP_001433420.1 156743291 5540851 complement(4377230..4377601) 1 NC_009767.1 KEGG: rrs:RoseRS_4062 hypothetical protein; hypothetical protein 4377601 5540851 Rcas_3352 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433420.1 4377230 R 383372 CDS YP_001433421.1 156743292 5540852 complement(4377611..4377973) 1 NC_009767.1 KEGG: rrs:RoseRS_4061 hypothetical protein; hypothetical protein 4377973 5540852 Rcas_3353 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433421.1 4377611 R 383372 CDS YP_001433422.1 156743293 5540853 complement(4378400..4380580) 1 NC_009767.1 KEGG: rrs:RoseRS_4060 hypothetical protein; hypothetical protein 4380580 5540853 Rcas_3354 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433422.1 4378400 R 383372 CDS YP_001433423.1 156743294 5540854 complement(4380902..4382125) 1 NC_009767.1 KEGG: rrs:RoseRS_4059 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 4382125 5540854 Rcas_3355 Roseiflexus castenholzii DSM 13941 arginine biosynthesis bifunctional protein ArgJ YP_001433423.1 4380902 R 383372 CDS YP_001433424.1 156743295 5540855 complement(4382517..4383725) 1 NC_009767.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 4383725 5540855 Rcas_3356 Roseiflexus castenholzii DSM 13941 argininosuccinate synthase YP_001433424.1 4382517 R 383372 CDS YP_001433425.1 156743296 5540856 complement(4383722..4387060) 1 NC_009767.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: rrs:RoseRS_4057 carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 4387060 5540856 Rcas_3357 Roseiflexus castenholzii DSM 13941 carbamoyl-phosphate synthase large subunit YP_001433425.1 4383722 R 383372 CDS YP_001433426.1 156743297 5540857 complement(4387138..4387611) 1 NC_009767.1 PFAM: histidine kinase A domain protein; KEGG: rrs:RoseRS_4056 histidine kinase A domain protein; histidine kinase A domain-containing protein 4387611 5540857 Rcas_3358 Roseiflexus castenholzii DSM 13941 histidine kinase A domain-containing protein YP_001433426.1 4387138 R 383372 CDS YP_001433427.1 156743298 5540858 complement(4387729..4388889) 1 NC_009767.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: rrs:RoseRS_4055 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 4388889 5540858 Rcas_3359 Roseiflexus castenholzii DSM 13941 carbamoyl-phosphate synthase small subunit YP_001433427.1 4387729 R 383372 CDS YP_001433428.1 156743299 5540859 complement(4388925..4389440) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4054 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4389440 5540859 Rcas_3360 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001433428.1 4388925 R 383372 CDS YP_001433429.1 156743300 5540860 complement(4389437..4390216) 1 NC_009767.1 KEGG: rrs:RoseRS_4053 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 4390216 5540860 Rcas_3361 Roseiflexus castenholzii DSM 13941 acetylglutamate kinase YP_001433429.1 4389437 R 383372 CDS YP_001433430.1 156743301 5540861 complement(4391237..4392247) 1 NC_009767.1 KEGG: rrs:RoseRS_4052 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 4392247 5540861 Rcas_3362 Roseiflexus castenholzii DSM 13941 N-acetyl-gamma-glutamyl-phosphate reductase YP_001433430.1 4391237 R 383372 CDS YP_001433431.1 156743302 5540862 4392649..4393734 1 NC_009767.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 4393734 5540862 Rcas_3363 Roseiflexus castenholzii DSM 13941 phosphoserine aminotransferase YP_001433431.1 4392649 D 383372 CDS YP_001433432.1 156743303 5540863 4393749..4395866 1 NC_009767.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: rrs:RoseRS_2215 ADP-ribosylation/crystallin J1; ADP-ribosylation/crystallin J1 4395866 5540863 Rcas_3364 Roseiflexus castenholzii DSM 13941 ADP-ribosylation/crystallin J1 YP_001433432.1 4393749 D 383372 CDS YP_001433433.1 156743304 5540864 complement(4395875..4396579) 1 NC_009767.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 4396579 gidB 5540864 gidB Roseiflexus castenholzii DSM 13941 16S rRNA methyltransferase GidB YP_001433433.1 4395875 R 383372 CDS YP_001433434.1 156743305 5540865 complement(4396603..4397202) 1 NC_009767.1 KEGG: rrs:RoseRS_2217 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 4397202 5540865 Rcas_3366 Roseiflexus castenholzii DSM 13941 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001433434.1 4396603 R 383372 CDS YP_001433435.1 156743306 5540866 complement(4397199..4397450) 1 NC_009767.1 KEGG: rrs:RoseRS_2218 hypothetical protein; hypothetical protein 4397450 5540866 Rcas_3367 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433435.1 4397199 R 383372 CDS YP_001433436.1 156743307 5540867 complement(4397456..4398409) 1 NC_009767.1 KEGG: rrs:RoseRS_2219 hypothetical protein; hypothetical protein 4398409 5540867 Rcas_3368 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433436.1 4397456 R 383372 CDS YP_001433437.1 156743308 5540868 complement(4398428..4398991) 1 NC_009767.1 KEGG: rrs:RoseRS_2220 hypothetical protein; hypothetical protein 4398991 5540868 Rcas_3369 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433437.1 4398428 R 383372 CDS YP_001433438.1 156743309 5540869 complement(4399222..4400142) 1 NC_009767.1 PFAM: band 7 protein; KEGG: rrs:RoseRS_2221 band 7 protein; hypothetical protein 4400142 5540869 Rcas_3370 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433438.1 4399222 R 383372 CDS YP_001433439.1 156743310 5540870 complement(4400139..4401128) 1 NC_009767.1 PFAM: band 7 protein; KEGG: rrs:RoseRS_2222 band 7 protein; hypothetical protein 4401128 5540870 Rcas_3371 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433439.1 4400139 R 383372 CDS YP_001433440.1 156743311 5540871 4401289..4402068 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein 4402068 5540871 Rcas_3372 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433440.1 4401289 D 383372 CDS YP_001433441.1 156743312 5540872 4402109..4402846 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein 4402846 5540872 Rcas_3373 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433441.1 4402109 D 383372 CDS YP_001433442.1 156743313 5540873 4402887..4403666 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein 4403666 5540873 Rcas_3374 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433442.1 4402887 D 383372 CDS YP_001433443.1 156743314 5540874 4403707..4404444 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein 4404444 5540874 Rcas_3375 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433443.1 4403707 D 383372 CDS YP_001433444.1 156743315 5540875 4404431..4406410 1 NC_009767.1 PFAM: UvrD/REP helicase; KEGG: rrs:RoseRS_2224 UvrD/REP helicase; UvrD/REP helicase 4406410 5540875 Rcas_3376 Roseiflexus castenholzii DSM 13941 UvrD/REP helicase YP_001433444.1 4404431 D 383372 CDS YP_001433445.1 156743316 5540876 4406893..4407714 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2225 alpha/beta hydrolase fold; alpha/beta hydrolase 4407714 5540876 Rcas_3377 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001433445.1 4406893 D 383372 CDS YP_001433446.1 156743317 5540877 4407778..4408215 1 NC_009767.1 KEGG: rrs:RoseRS_2226 hypothetical protein; hypothetical protein 4408215 5540877 Rcas_3378 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433446.1 4407778 D 383372 CDS YP_001433447.1 156743318 5540878 4408234..4408437 1 NC_009767.1 hypothetical protein 4408437 5540878 Rcas_3379 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433447.1 4408234 D 383372 CDS YP_001433448.1 156743319 5540879 4408434..4408691 1 NC_009767.1 hypothetical protein 4408691 5540879 Rcas_3380 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433448.1 4408434 D 383372 CDS YP_001433449.1 156743320 5540880 4408935..4409804 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_2229 protein kinase; serine/threonine protein kinase 4409804 5540880 Rcas_3381 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001433449.1 4408935 D 383372 CDS YP_001433450.1 156743321 5540881 complement(4410002..4411498) 1 NC_009767.1 KEGG: rrs:RoseRS_2230 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 4411498 5540881 Rcas_3382 Roseiflexus castenholzii DSM 13941 proton-translocating NADH-quinone oxidoreductase subunit N YP_001433450.1 4410002 R 383372 CDS YP_001433451.1 156743322 5540882 complement(4411513..4413036) 1 NC_009767.1 KEGG: rrs:RoseRS_2231 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 4413036 5540882 Rcas_3383 Roseiflexus castenholzii DSM 13941 proton-translocating NADH-quinone oxidoreductase subunit M YP_001433451.1 4411513 R 383372 CDS YP_001433452.1 156743323 5540883 complement(4413042..4415006) 1 NC_009767.1 KEGG: rrs:RoseRS_2232 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 4415006 5540883 Rcas_3384 Roseiflexus castenholzii DSM 13941 proton-translocating NADH-quinone oxidoreductase subunit L YP_001433452.1 4413042 R 383372 CDS YP_001433453.1 156743324 5540884 complement(4415075..4415377) 1 NC_009767.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rrs:RoseRS_2233 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 4415377 5540884 Rcas_3385 Roseiflexus castenholzii DSM 13941 NADH-ubiquinone oxidoreductase chain 4L YP_001433453.1 4415075 R 383372 CDS YP_001433454.1 156743325 5540885 complement(4415548..4416060) 1 NC_009767.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: rrs:RoseRS_2234 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 4416060 5540885 Rcas_3386 Roseiflexus castenholzii DSM 13941 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_001433454.1 4415548 R 383372 CDS YP_001433455.1 156743326 5540886 complement(4416074..4416571) 1 NC_009767.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2235 NADH-quinone oxidoreductase, chain I; NADH-quinone oxidoreductase subunit I 4416571 5540886 Rcas_3387 Roseiflexus castenholzii DSM 13941 NADH-quinone oxidoreductase subunit I YP_001433455.1 4416074 R 383372 CDS YP_001433456.1 156743327 5540887 complement(4416613..4417785) 1 NC_009767.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rrs:RoseRS_2236 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 4417785 5540887 Rcas_3388 Roseiflexus castenholzii DSM 13941 NADH dehydrogenase (quinone) YP_001433456.1 4416613 R 383372 CDS YP_001433457.1 156743328 5540888 complement(4417782..4420553) 1 NC_009767.1 TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_2237 NADH-quinone oxidoreductase, chain G; NADH-quinone oxidoreductase subunit G 4420553 5540888 Rcas_3389 Roseiflexus castenholzii DSM 13941 NADH-quinone oxidoreductase subunit G YP_001433457.1 4417782 R 383372 CDS YP_001433458.1 156743329 5540889 complement(4420565..4421158) 1 NC_009767.1 KEGG: ava:Ava_2609 protein of unknown function DUF820; response regulator receiver protein 4421158 5540889 Rcas_3390 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001433458.1 4420565 R 383372 CDS YP_001433459.1 156743330 5540890 complement(4421168..4422523) 1 NC_009767.1 KEGG: rrs:RoseRS_2238 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F 4422523 5540890 Rcas_3391 Roseiflexus castenholzii DSM 13941 NADH-quinone oxidoreductase subunit F YP_001433459.1 4421168 R 383372 CDS YP_001433460.1 156743331 5540891 4422670..4423890 1 NC_009767.1 KEGG: rrs:RoseRS_2239 hypothetical protein; hypothetical protein 4423890 5540891 Rcas_3392 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433460.1 4422670 D 383372 CDS YP_001433461.1 156743332 5540892 4423906..4425051 1 NC_009767.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase 4425051 solA 5540892 solA Roseiflexus castenholzii DSM 13941 N-methyltryptophan oxidase YP_001433461.1 4423906 D 383372 CDS YP_001433462.1 156743333 5540893 complement(4425032..4426891) 1 NC_009767.1 KEGG: rrs:RoseRS_2240 hypothetical protein; hypothetical protein 4426891 5540893 Rcas_3394 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433462.1 4425032 R 383372 CDS YP_001433463.1 156743334 5540894 complement(4427098..4428228) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0728 protein of unknown function DUF820; hypothetical protein 4428228 5540894 Rcas_3395 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433463.1 4427098 R 383372 CDS YP_001433464.1 156743335 5540895 complement(4428678..4429340) 1 NC_009767.1 PFAM: adenylate kinase; KEGG: rrs:RoseRS_1214 adenylate kinase; adenylate kinase 4429340 5540895 Rcas_3396 Roseiflexus castenholzii DSM 13941 adenylate kinase YP_001433464.1 4428678 R 383372 CDS YP_001433465.1 156743336 5540896 complement(4429366..4430061) 1 NC_009767.1 PFAM: Translin; KEGG: rrs:RoseRS_1215 translin; haloacid dehalogenase 4430061 5540896 Rcas_3397 Roseiflexus castenholzii DSM 13941 haloacid dehalogenase YP_001433465.1 4429366 R 383372 CDS YP_001433466.1 156743337 5540897 4430214..4432010 1 NC_009767.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1216 ABC transporter related; ABC transporter-like protein 4432010 5540897 Rcas_3398 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433466.1 4430214 D 383372 CDS YP_001433467.1 156743338 5540898 4432250..4433230 1 NC_009767.1 PFAM: deoxyhypusine synthase; KEGG: rrs:RoseRS_1218 deoxyhypusine synthase; deoxyhypusine synthase 4433230 5540898 Rcas_3399 Roseiflexus castenholzii DSM 13941 deoxyhypusine synthase YP_001433467.1 4432250 D 383372 CDS YP_001433468.1 156743339 5540899 4433208..4433450 1 NC_009767.1 hypothetical protein 4433450 5540899 Rcas_3400 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433468.1 4433208 D 383372 CDS YP_001433469.1 156743340 5540900 4433451..4433738 1 NC_009767.1 hypothetical protein 4433738 5540900 Rcas_3401 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433469.1 4433451 D 383372 CDS YP_001433470.1 156743341 5540901 4434144..4434323 1 NC_009767.1 hypothetical protein 4434323 5540901 Rcas_3402 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433470.1 4434144 D 383372 CDS YP_001433471.1 156743342 5540902 complement(4434535..4434822) 1 NC_009767.1 hypothetical protein 4434822 5540902 Rcas_3403 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433471.1 4434535 R 383372 CDS YP_001433472.1 156743343 5540903 4435090..4435701 1 NC_009767.1 PFAM: peptidase S14 ClpP; KEGG: rrs:RoseRS_1553 endopeptidase Clp; endopeptidase Clp 4435701 5540903 Rcas_3404 Roseiflexus castenholzii DSM 13941 endopeptidase Clp YP_001433472.1 4435090 D 383372 CDS YP_001433473.1 156743344 5540904 complement(4435704..4436777) 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_1554 alpha/beta hydrolase fold; alpha/beta hydrolase 4436777 5540904 Rcas_3405 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001433473.1 4435704 R 383372 CDS YP_001433474.1 156743345 5540905 4436855..4437634 1 NC_009767.1 KEGG: rrs:RoseRS_1555 enoyl-(acyl-carrier-protein)-like protein; enoyl-(acyl-carrier-protein)-like protein 4437634 5540905 Rcas_3406 Roseiflexus castenholzii DSM 13941 enoyl-(acyl-carrier-protein)-like protein YP_001433474.1 4436855 D 383372 CDS YP_001433475.1 156743346 5540906 complement(4437618..4438841) 1 NC_009767.1 PFAM: protein of unknown function UPF0118; KEGG: rrs:RoseRS_1556 protein of unknown function UPF0118; hypothetical protein 4438841 5540906 Rcas_3407 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433475.1 4437618 R 383372 CDS YP_001433476.1 156743347 5540907 complement(4439176..4439439) 1 NC_009767.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 4439439 5540907 Rcas_3408 Roseiflexus castenholzii DSM 13941 cell division topological specificity factor MinE YP_001433476.1 4439176 R 383372 CDS YP_001433477.1 156743348 5540908 complement(4439508..4440320) 1 NC_009767.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rrs:RoseRS_1558 septum site-determining protein MinD; septum site-determining protein MinD 4440320 5540908 Rcas_3409 Roseiflexus castenholzii DSM 13941 septum site-determining protein MinD YP_001433477.1 4439508 R 383372 CDS YP_001433478.1 156743349 5540909 complement(4440361..4441038) 1 NC_009767.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: rrs:RoseRS_1559 septum site-determining protein MinC; septum site-determining protein MinC 4441038 5540909 Rcas_3410 Roseiflexus castenholzii DSM 13941 septum site-determining protein MinC YP_001433478.1 4440361 R 383372 CDS YP_001433479.1 156743350 5540910 complement(4441150..4442316) 1 NC_009767.1 PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_1560 aminotransferase, class I and II; class I/II aminotransferase 4442316 5540910 Rcas_3411 Roseiflexus castenholzii DSM 13941 class I/II aminotransferase YP_001433479.1 4441150 R 383372 CDS YP_001433480.1 156743351 5540911 4442413..4443648 1 NC_009767.1 KEGG: rrs:RoseRS_1561 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 4443648 5540911 Rcas_3412 Roseiflexus castenholzii DSM 13941 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001433480.1 4442413 D 383372 CDS YP_001433481.1 156743352 5540912 4443656..4444765 1 NC_009767.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_1562 PBS lyase heat domain protein repeat-containing protein; PBS lyase 4444765 5540912 Rcas_3413 Roseiflexus castenholzii DSM 13941 PBS lyase YP_001433481.1 4443656 D 383372 CDS YP_001433482.1 156743353 5540913 4444784..4445893 1 NC_009767.1 PFAM: aminodeoxychorismate lyase; KEGG: rrs:RoseRS_1563 aminodeoxychorismate lyase; aminodeoxychorismate lyase 4445893 5540913 Rcas_3414 Roseiflexus castenholzii DSM 13941 aminodeoxychorismate lyase YP_001433482.1 4444784 D 383372 CDS YP_001433483.1 156743354 5540914 4445878..4446729 1 NC_009767.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: rrs:RoseRS_1564 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 4446729 5540914 Rcas_3415 Roseiflexus castenholzii DSM 13941 shikimate 5-dehydrogenase YP_001433483.1 4445878 D 383372 CDS YP_001433484.1 156743355 5540915 4446741..4447505 1 NC_009767.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: rrs:RoseRS_1565 peptidase A24A domain protein; peptidase A24A domain-containing protein 4447505 5540915 Rcas_3416 Roseiflexus castenholzii DSM 13941 peptidase A24A domain-containing protein YP_001433484.1 4446741 D 383372 CDS YP_001433485.1 156743356 5540916 4447620..4451195 1 NC_009767.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_1566 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 4451195 5540916 Rcas_3417 Roseiflexus castenholzii DSM 13941 peptidase S8/S53 subtilisin kexin sedolisin YP_001433485.1 4447620 D 383372 CDS YP_001433486.1 156743357 5540917 complement(4452705..4454066) 1 NC_009767.1 TIGRFAM: conserved repeat domain; KEGG: rrs:RoseRS_1620 hypothetical protein; hypothetical protein 4454066 5540917 Rcas_3418 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433486.1 4452705 R 383372 CDS YP_001433487.1 156743358 5540918 complement(4454095..4456794) 1 NC_009767.1 KEGG: rrs:RoseRS_1619 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 4456794 5540918 Rcas_3419 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001433487.1 4454095 R 383372 CDS YP_001433488.1 156743359 5540919 complement(4457044..4459203) 1 NC_009767.1 KEGG: rrs:RoseRS_1618 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 4459203 5540919 Rcas_3420 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001433488.1 4457044 R 383372 CDS YP_001433489.1 156743360 5540920 complement(4459336..4460748) 1 NC_009767.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: rrs:RoseRS_1617 UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase 4460748 5540920 Rcas_3421 Roseiflexus castenholzii DSM 13941 UDP-glucose/GDP-mannose dehydrogenase YP_001433489.1 4459336 R 383372 CDS YP_001433490.1 156743361 5540921 complement(4460780..4462168) 1 NC_009767.1 KEGG: rrs:RoseRS_1616 hypothetical protein; FHA domain-containing protein 4462168 5540921 Rcas_3422 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001433490.1 4460780 R 383372 CDS YP_001433491.1 156743362 5540922 complement(4462226..4464523) 1 NC_009767.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: rrs:RoseRS_1615 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 4464523 5540922 Rcas_3423 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001433491.1 4462226 R 383372 CDS YP_001433492.1 156743363 5540923 complement(4464685..4465611) 1 NC_009767.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_1614 RarD protein, DMT superfamily transporter; transporter DMT superfamily protein 4465611 5540923 Rcas_3424 Roseiflexus castenholzii DSM 13941 transporter DMT superfamily protein YP_001433492.1 4464685 R 383372 CDS YP_001433493.1 156743364 5540924 4465747..4465995 1 NC_009767.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mem:Memar_0224 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4465995 5540924 Rcas_3425 Roseiflexus castenholzii DSM 13941 4Fe-4S ferredoxin YP_001433493.1 4465747 D 383372 CDS YP_001433494.1 156743365 5540925 4465992..4466411 1 NC_009767.1 KEGG: rrs:RoseRS_0757 hypothetical protein; hypothetical protein 4466411 5540925 Rcas_3426 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433494.1 4465992 D 383372 CDS YP_001433495.1 156743366 5540926 complement(4466418..4467089) 1 NC_009767.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rrs:RoseRS_0292 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 4467089 5540926 Rcas_3427 Roseiflexus castenholzii DSM 13941 Crp/FNR family transcriptional regulator YP_001433495.1 4466418 R 383372 CDS YP_001433496.1 156743367 5540927 4467978..4468406 1 NC_009767.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rrs:RoseRS_1613 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidyl-prolyl cis-trans isomerase 4468406 5540927 Rcas_3428 Roseiflexus castenholzii DSM 13941 FKBP-type peptidyl-prolyl cis-trans isomerase YP_001433496.1 4467978 D 383372 CDS YP_001433497.1 156743368 5540928 4468782..4471445 1 NC_009767.1 PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_1612 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase 4471445 5540928 Rcas_3429 Roseiflexus castenholzii DSM 13941 D-lactate dehydrogenase YP_001433497.1 4468782 D 383372 CDS YP_001433498.1 156743369 5540929 4471569..4473641 1 NC_009767.1 PFAM: cytochrome d1 heme region; KEGG: hch:HCH_04416 cytochrome c, mono- and diheme variants; hydroxylamine reductase 4473641 5540929 Rcas_3430 Roseiflexus castenholzii DSM 13941 hydroxylamine reductase YP_001433498.1 4471569 D 383372 CDS YP_001433499.1 156743370 5540930 complement(4473996..4475009) 1 NC_009767.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_1611 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 4475009 5540930 Rcas_3431 Roseiflexus castenholzii DSM 13941 dTDP-glucose 4,6-dehydratase YP_001433499.1 4473996 R 383372 CDS YP_001433500.1 156743371 5540931 complement(4475230..4478124) 1 NC_009767.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: rrs:RoseRS_1610 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 4478124 5540931 Rcas_3432 Roseiflexus castenholzii DSM 13941 N-acetylmuramoyl-L-alanine amidase YP_001433500.1 4475230 R 383372 CDS YP_001433501.1 156743372 5540932 4478717..4480201 1 NC_009767.1 PFAM: ComEC/Rec2-related protein; KEGG: rrs:RoseRS_1609 ComEC/Rec2-related protein; ComEC/Rec2-like protein 4480201 5540932 Rcas_3433 Roseiflexus castenholzii DSM 13941 ComEC/Rec2-like protein YP_001433501.1 4478717 D 383372 CDS YP_001433502.1 156743373 5540933 complement(4480215..4482467) 1 NC_009767.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rrs:RoseRS_1510 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4482467 5540933 Rcas_3434 Roseiflexus castenholzii DSM 13941 methyl-accepting chemotaxis sensory transducer YP_001433502.1 4480215 R 383372 CDS YP_001433503.1 156743374 5540934 complement(4483035..4483736) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2937 protein of unknown function DUF820; hypothetical protein 4483736 5540934 Rcas_3435 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433503.1 4483035 R 383372 CDS YP_001433504.1 156743375 5540935 complement(4484124..4484957) 1 NC_009767.1 PFAM: LmbE family protein; KEGG: rrs:RoseRS_1608 LmbE family protein; LmbE family protein 4484957 5540935 Rcas_3436 Roseiflexus castenholzii DSM 13941 LmbE family protein YP_001433504.1 4484124 R 383372 CDS YP_001433505.1 156743376 5540936 complement(4484968..4486968) 1 NC_009767.1 KEGG: rrs:RoseRS_1607 hypothetical protein; hypothetical protein 4486968 5540936 Rcas_3437 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433505.1 4484968 R 383372 CDS YP_001433506.1 156743377 5540937 complement(4487433..4487690) 1 NC_009767.1 KEGG: rrs:RoseRS_1606 hypothetical protein; hypothetical protein 4487690 5540937 Rcas_3438 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433506.1 4487433 R 383372 CDS YP_001433507.1 156743378 5540938 4488170..4490680 1 NC_009767.1 KEGG: rrs:RoseRS_1605 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 4490680 5540938 Rcas_3439 Roseiflexus castenholzii DSM 13941 ATP-dependent protease La YP_001433507.1 4488170 D 383372 CDS YP_001433508.1 156743379 5540939 4490680..4491612 1 NC_009767.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: rrs:RoseRS_1604 aminoglycoside/hydroxyurea antibiotic resistance kinase; aminoglycoside/hydroxyurea antibiotic resistance kinase 4491612 5540939 Rcas_3440 Roseiflexus castenholzii DSM 13941 aminoglycoside/hydroxyurea antibiotic resistance kinase YP_001433508.1 4490680 D 383372 CDS YP_001433509.1 156743380 5540940 4491609..4492652 1 NC_009767.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_1603 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4492652 5540940 Rcas_3441 Roseiflexus castenholzii DSM 13941 L-carnitine dehydratase/bile acid-inducible protein F YP_001433509.1 4491609 D 383372 CDS YP_001433510.1 156743381 5540941 4492677..4493531 1 NC_009767.1 PFAM: SEC-C motif domain protein; KEGG: rrs:RoseRS_1602 sec-C motif domain protein; SecC motif-containing protein 4493531 5540941 Rcas_3442 Roseiflexus castenholzii DSM 13941 SecC motif-containing protein YP_001433510.1 4492677 D 383372 CDS YP_001433511.1 156743382 5540942 4495036..4497003 1 NC_009767.1 KEGG: rrs:RoseRS_1601 hypothetical protein; hypothetical protein 4497003 5540942 Rcas_3443 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433511.1 4495036 D 383372 CDS YP_001433512.1 156743383 5540943 4497290..4497853 1 NC_009767.1 KEGG: rrs:RoseRS_1600 CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein 4497853 5540943 Rcas_3444 Roseiflexus castenholzii DSM 13941 CopG/DNA-binding domain-containing protein YP_001433512.1 4497290 D 383372 CDS YP_001433513.1 156743384 5540944 4499248..4499919 1 NC_009767.1 PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_1599 phosphoglycerate mutase; phosphoglycerate mutase 4499919 5540944 Rcas_3445 Roseiflexus castenholzii DSM 13941 phosphoglycerate mutase YP_001433513.1 4499248 D 383372 CDS YP_001433514.1 156743385 5540945 complement(4501580..4503349) 1 NC_009767.1 PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_1597 allergen V5/TPX-1 family protein; SCP-like extracellular 4503349 5540945 Rcas_3446 Roseiflexus castenholzii DSM 13941 SCP-like extracellular YP_001433514.1 4501580 R 383372 CDS YP_001433515.1 156743386 5540946 4503478..4504242 1 NC_009767.1 PFAM: RDD domain containing protein; KEGG: rrs:RoseRS_1596 RDD domain containing protein; RDD domain-containing protein 4504242 5540946 Rcas_3447 Roseiflexus castenholzii DSM 13941 RDD domain-containing protein YP_001433515.1 4503478 D 383372 CDS YP_001433516.1 156743387 5540947 complement(4504301..4505194) 1 NC_009767.1 PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_1584 histone deacetylase superfamily; histone deacetylase superfamily protein 4505194 5540947 Rcas_3448 Roseiflexus castenholzii DSM 13941 histone deacetylase superfamily protein YP_001433516.1 4504301 R 383372 CDS YP_001433517.1 156743388 5540948 complement(4505191..4506825) 1 NC_009767.1 PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: rrs:RoseRS_1583 ATP dependent DNA ligase; ATP dependent DNA ligase 4506825 5540948 Rcas_3449 Roseiflexus castenholzii DSM 13941 ATP dependent DNA ligase YP_001433517.1 4505191 R 383372 CDS YP_001433518.1 156743389 5540949 4507059..4508276 1 NC_009767.1 PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_2195 allergen V5/TPX-1 family protein; SCP-like extracellular 4508276 5540949 Rcas_3450 Roseiflexus castenholzii DSM 13941 SCP-like extracellular YP_001433518.1 4507059 D 383372 CDS YP_001433519.1 156743390 5540950 4508337..4508891 1 NC_009767.1 KEGG: rrs:RoseRS_2194 hypothetical protein; hypothetical protein 4508891 5540950 Rcas_3451 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433519.1 4508337 D 383372 CDS YP_001433520.1 156743391 5540951 4508891..4509154 1 NC_009767.1 hypothetical protein 4509154 5540951 Rcas_3452 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433520.1 4508891 D 383372 CDS YP_001433521.1 156743392 5540952 complement(4510571..4512013) 1 NC_009767.1 PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_2732 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 4512013 5540952 Rcas_3453 Roseiflexus castenholzii DSM 13941 carbohydrate kinase FGGY YP_001433521.1 4510571 R 383372 CDS YP_001433522.1 156743393 5540953 complement(4512026..4514218) 1 NC_009767.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_2731 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; short chain dehydrogenase 4514218 5540953 Rcas_3454 Roseiflexus castenholzii DSM 13941 short chain dehydrogenase YP_001433522.1 4512026 R 383372 CDS YP_001433523.1 156743394 5540954 complement(4514608..4515894) 1 NC_009767.1 catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 4515894 5540954 Rcas_3455 Roseiflexus castenholzii DSM 13941 L-rhamnose isomerase YP_001433523.1 4514608 R 383372 CDS YP_001433524.1 156743395 5540955 complement(4515922..4516245) 1 NC_009767.1 PFAM: protein of unknown function DUF718; KEGG: rrs:RoseRS_2729 protein of unknown function DUF718; hypothetical protein 4516245 5540955 Rcas_3456 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433524.1 4515922 R 383372 CDS YP_001433525.1 156743396 5540956 complement(4516408..4517205) 1 NC_009767.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rrs:RoseRS_2724 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 4517205 5540956 Rcas_3457 Roseiflexus castenholzii DSM 13941 DeoR family transcriptional regulator YP_001433525.1 4516408 R 383372 CDS YP_001433526.1 156743397 5540957 4517344..4517967 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2260 protein of unknown function DUF820; hypothetical protein 4517967 5540957 Rcas_3458 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433526.1 4517344 D 383372 CDS YP_001433527.1 156743398 5540958 complement(4517971..4519029) 1 NC_009767.1 catalyzes N(2)-acetyl-L-lysine + H(2)O = acetate + L-lysine; acetyl-lysine deacetylase 4519029 5540958 Rcas_3459 Roseiflexus castenholzii DSM 13941 acetyl-lysine deacetylase YP_001433527.1 4517971 R 383372 CDS YP_001433528.1 156743399 5540959 complement(4519026..4520192) 1 NC_009767.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_2722 acetylornithine and succinylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 4520192 5540959 Rcas_3460 Roseiflexus castenholzii DSM 13941 acetylornithine and succinylornithine aminotransferase YP_001433528.1 4519026 R 383372 CDS YP_001433529.1 156743400 5540960 4521185..4521697 1 NC_009767.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_2721 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4521697 5540960 Rcas_3461 Roseiflexus castenholzii DSM 13941 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001433529.1 4521185 D 383372 CDS YP_001433530.1 156743401 5540961 complement(4521823..4523061) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1063 major facilitator superfamily MFS_1; major facilitator transporter 4523061 5540961 Rcas_3462 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001433530.1 4521823 R 383372 CDS YP_001433531.1 156743402 5540962 4523136..4523507 1 NC_009767.1 hypothetical protein 4523507 5540962 Rcas_3463 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433531.1 4523136 D 383372 CDS YP_001433532.1 156743403 5540963 complement(4523876..4524355) 1 NC_009767.1 KEGG: mlo:mlr9643 transposase; hypothetical protein 4524355 5540963 Rcas_3464 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433532.1 4523876 R 383372 CDS YP_001433533.1 156743404 5540964 complement(4524444..4525802) 1 NC_009767.1 KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 4525802 5540964 Rcas_3465 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433533.1 4524444 R 383372 CDS YP_001433534.1 156743405 5540965 complement(4526068..4526871) 1 NC_009767.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate and N-acetyl-L-aminoadipate to form N-acetyl-L-aminoadipate 5-phosphate in arginine and lysine biosynthesis; acetylglutamate/acetylaminoadipate kinase 4526871 5540965 Rcas_3466 Roseiflexus castenholzii DSM 13941 acetylglutamate/acetylaminoadipate kinase YP_001433534.1 4526068 R 383372 CDS YP_001433535.1 156743406 5540966 complement(4526868..4528991) 1 NC_009767.1 PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_1061 pyruvate carboxyltransferase; pyruvate carboxyltransferase 4528991 5540966 Rcas_3467 Roseiflexus castenholzii DSM 13941 pyruvate carboxyltransferase YP_001433535.1 4526868 R 383372 CDS YP_001433536.1 156743407 5540967 complement(4529223..4530269) 1 NC_009767.1 KEGG: rrs:RoseRS_1060 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 4530269 5540967 Rcas_3468 Roseiflexus castenholzii DSM 13941 N-acetyl-gamma-glutamyl-phosphate reductase YP_001433536.1 4529223 R 383372 CDS YP_001433537.1 156743408 5540968 complement(4530266..4531123) 1 NC_009767.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; lysine biosynthesis enzyme LysX; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp; KEGG: rrs:RoseRS_1059 lysine biosynthesis enzyme LysX; lysine biosynthesis protein LysX 4531123 5540968 Rcas_3469 Roseiflexus castenholzii DSM 13941 lysine biosynthesis protein LysX YP_001433537.1 4530266 R 383372 CDS YP_001433538.1 156743409 5540969 complement(4531127..4531294) 1 NC_009767.1 TIGRFAM: lysine biosynthesis protein LysW; PFAM: PhnA protein; KEGG: rrs:RoseRS_1058 lysine biosynthesis protein LysW; lysine biosynthesis protein LysW 4531294 5540969 Rcas_3470 Roseiflexus castenholzii DSM 13941 lysine biosynthesis protein LysW YP_001433538.1 4531127 R 383372 CDS YP_001433539.1 156743410 5540970 complement(4531309..4532391) 1 NC_009767.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rrs:RoseRS_1057 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 4532391 5540970 Rcas_3471 Roseiflexus castenholzii DSM 13941 3-isopropylmalate dehydrogenase YP_001433539.1 4531309 R 383372 CDS YP_001433540.1 156743411 5540971 complement(4532388..4532888) 1 NC_009767.1 catalyzes the formation of homoisocitrate from cis-homoaconitate; homoaconitate hydratase small subunit 4532888 5540971 Rcas_3472 Roseiflexus castenholzii DSM 13941 homoaconitate hydratase small subunit YP_001433540.1 4532388 R 383372 CDS YP_001433541.1 156743412 5540972 complement(4533113..4534231) 1 NC_009767.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_1055 cystathionine gamma-synthase; cystathionine gamma-synthase 4534231 5540972 Rcas_3473 Roseiflexus castenholzii DSM 13941 cystathionine gamma-synthase YP_001433541.1 4533113 R 383372 CDS YP_001433542.1 156743413 5540973 complement(4534622..4535881) 1 NC_009767.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 4535881 5540973 Rcas_3474 Roseiflexus castenholzii DSM 13941 3-isopropylmalate dehydratase large subunit YP_001433542.1 4534622 R 383372 CDS YP_001433543.1 156743414 5540974 4538012..4538569 1 NC_009767.1 KEGG: rrs:RoseRS_1052 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 4538569 5540974 Rcas_3475 Roseiflexus castenholzii DSM 13941 peptide deformylase YP_001433543.1 4538012 D 383372 CDS YP_001433544.1 156743415 5540975 4538994..4539974 1 NC_009767.1 KEGG: rrs:RoseRS_1050 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 4539974 5540975 Rcas_3476 Roseiflexus castenholzii DSM 13941 signal recognition particle-docking protein FtsY YP_001433544.1 4538994 D 383372 CDS YP_001433545.1 156743416 5540976 4539991..4540197 1 NC_009767.1 KEGG: rrs:RoseRS_1049 hypothetical protein; hypothetical protein 4540197 5540976 Rcas_3477 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433545.1 4539991 D 383372 CDS YP_001433546.1 156743417 5540977 4540190..4540642 1 NC_009767.1 KEGG: rrs:RoseRS_1048 hypothetical protein; hypothetical protein 4540642 5540977 Rcas_3478 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433546.1 4540190 D 383372 CDS YP_001433547.1 156743418 5540978 4540639..4541973 1 NC_009767.1 KEGG: rrs:RoseRS_1047 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase, type I 4541973 5540978 Rcas_3479 Roseiflexus castenholzii DSM 13941 glutamine synthetase, type I YP_001433547.1 4540639 D 383372 CDS YP_001433548.1 156743419 5540979 4542200..4543627 1 NC_009767.1 KEGG: rrs:RoseRS_1046 hypothetical protein; hypothetical protein 4543627 5540979 Rcas_3480 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433548.1 4542200 D 383372 CDS YP_001433549.1 156743420 5540980 4543632..4544042 1 NC_009767.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: rrs:RoseRS_1045 holo-acyl-carrier-protein synthase; holo-acyl-carrier-protein synthase 4544042 5540980 Rcas_3481 Roseiflexus castenholzii DSM 13941 holo-acyl-carrier-protein synthase YP_001433549.1 4543632 D 383372 CDS YP_001433550.1 156743421 5540981 4544036..4544425 1 NC_009767.1 KEGG: rrs:RoseRS_1044 hypothetical protein; hypothetical protein 4544425 5540981 Rcas_3482 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433550.1 4544036 D 383372 CDS YP_001433551.1 156743422 5540982 4545065..4546726 1 NC_009767.1 PFAM: Protein of unknown function DUF1800; KEGG: rrs:RoseRS_2159 hypothetical protein; hypothetical protein 4546726 5540982 Rcas_3483 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433551.1 4545065 D 383372 CDS YP_001433552.1 156743423 5540983 4546735..4548054 1 NC_009767.1 PFAM: protein of unknown function DUF1501; KEGG: rrs:RoseRS_2158 protein of unknown function DUF1501; hypothetical protein 4548054 5540983 Rcas_3484 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433552.1 4546735 D 383372 CDS YP_001433553.1 156743424 5540984 complement(4548061..4548480) 1 NC_009767.1 PFAM: protein of unknown function UPF0047; KEGG: rrs:RoseRS_2157 protein of unknown function UPF0047; hypothetical protein 4548480 5540984 Rcas_3485 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433553.1 4548061 R 383372 CDS YP_001433554.1 156743425 5540985 complement(4548532..4549554) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0728 protein of unknown function DUF820; hypothetical protein 4549554 5540985 Rcas_3486 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433554.1 4548532 R 383372 CDS YP_001433555.1 156743426 5540986 complement(4549593..4550156) 1 NC_009767.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_2156 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 4550156 5540986 Rcas_3487 Roseiflexus castenholzii DSM 13941 alkyl hydroperoxide reductase YP_001433555.1 4549593 R 383372 CDS YP_001433556.1 156743427 5540987 4550422..4552080 1 NC_009767.1 TIGRFAM: Zeta-phytoene desaturase; PFAM: amine oxidase; KEGG: rrs:RoseRS_2155 phytoene dehydrogenase-related protein; zeta-phytoene desaturase 4552080 5540987 Rcas_3488 Roseiflexus castenholzii DSM 13941 zeta-phytoene desaturase YP_001433556.1 4550422 D 383372 CDS YP_001433557.1 156743428 5540988 4552145..4555264 1 NC_009767.1 PFAM: WD-40 repeat protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_2154 WD-40 repeat protein; hypothetical protein 4555264 5540988 Rcas_3489 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433557.1 4552145 D 383372 CDS YP_001433558.1 156743429 5540989 complement(4555278..4556471) 1 NC_009767.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rrs:RoseRS_2153 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 4556471 5540989 Rcas_3490 Roseiflexus castenholzii DSM 13941 ErfK/YbiS/YcfS/YnhG family protein YP_001433558.1 4555278 R 383372 CDS YP_001433559.1 156743430 5540990 complement(4556596..4557240) 1 NC_009767.1 PFAM: isochorismatase hydrolase; KEGG: rrs:RoseRS_0048 isochorismatase hydrolase; N-carbamoylsarcosine amidase 4557240 5540990 Rcas_3491 Roseiflexus castenholzii DSM 13941 N-carbamoylsarcosine amidase YP_001433559.1 4556596 R 383372 CDS YP_001433560.1 156743431 5540991 complement(4557521..4559458) 1 NC_009767.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: nar:Saro_0175 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 4559458 5540991 Rcas_3492 Roseiflexus castenholzii DSM 13941 5-oxoprolinase YP_001433560.1 4557521 R 383372 CDS YP_001433561.1 156743432 5540992 complement(4559503..4561548) 1 NC_009767.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: nar:Saro_0176 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 4561548 5540992 Rcas_3493 Roseiflexus castenholzii DSM 13941 5-oxoprolinase YP_001433561.1 4559503 R 383372 CDS YP_001433562.1 156743433 5540993 complement(4561594..4562547) 1 NC_009767.1 PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_0049 pyruvate carboxyltransferase; pyruvate carboxyltransferase 4562547 5540993 Rcas_3494 Roseiflexus castenholzii DSM 13941 pyruvate carboxyltransferase YP_001433562.1 4561594 R 383372 CDS YP_001433563.1 156743434 5540994 complement(4562547..4563755) 1 NC_009767.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_0050 formyl-CoA transferase; formyl-CoA transferase 4563755 5540994 Rcas_3495 Roseiflexus castenholzii DSM 13941 formyl-CoA transferase YP_001433563.1 4562547 R 383372 CDS YP_001433564.1 156743435 5540995 complement(4563761..4564474) 1 NC_009767.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rrs:RoseRS_0051 transcriptional regulator, GntR family; GntR family transcriptional regulator 4564474 5540995 Rcas_3496 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001433564.1 4563761 R 383372 CDS YP_001433565.1 156743436 5540996 complement(4564809..4565255) 1 NC_009767.1 hypothetical protein 4565255 5540996 Rcas_3497 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433565.1 4564809 R 383372 CDS YP_001433566.1 156743437 5540997 complement(4565258..4565968) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_4073 ABC transporter related; ABC transporter-like protein 4565968 5540997 Rcas_3498 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433566.1 4565258 R 383372 CDS YP_001433567.1 156743438 5540998 complement(4565995..4567845) 1 NC_009767.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_4103 ABC transporter related; ABC transporter-like protein 4567845 5540998 Rcas_3499 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433567.1 4565995 R 383372 CDS YP_001433568.1 156743439 5540999 complement(4567859..4568734) 1 NC_009767.1 PFAM: inner-membrane translocator; KEGG: nca:Noca_4104 inner-membrane translocator; inner-membrane translocator 4568734 5540999 Rcas_3500 Roseiflexus castenholzii DSM 13941 inner-membrane translocator YP_001433568.1 4567859 R 383372 CDS YP_001433569.1 156743440 5541000 complement(4568846..4570192) 1 NC_009767.1 PFAM: Extracellular ligand-binding receptor; KEGG: nca:Noca_4105 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4570192 5541000 Rcas_3501 Roseiflexus castenholzii DSM 13941 extracellular ligand-binding receptor YP_001433569.1 4568846 R 383372 CDS YP_001433570.1 156743441 5541001 complement(4570236..4571000) 1 NC_009767.1 KEGG: nca:Noca_4076 hypothetical protein; hypothetical protein 4571000 5541001 Rcas_3502 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433570.1 4570236 R 383372 CDS YP_001433571.1 156743442 5541002 complement(4571050..4571490) 1 NC_009767.1 KEGG: ana:all5013 unknown protein; hypothetical protein 4571490 5541002 Rcas_3503 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433571.1 4571050 R 383372 CDS YP_001433572.1 156743443 5541003 complement(4571490..4572914) 1 NC_009767.1 PFAM: aldehyde dehydrogenase; KEGG: ana:all5022 aldehyde dehydrogenase; aldehyde dehydrogenase 4572914 5541003 Rcas_3504 Roseiflexus castenholzii DSM 13941 aldehyde dehydrogenase YP_001433572.1 4571490 R 383372 CDS YP_001433573.1 156743444 5541004 complement(4572914..4574011) 1 NC_009767.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ana:all5023 probable hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 4574011 5541004 Rcas_3505 Roseiflexus castenholzii DSM 13941 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001433573.1 4572914 R 383372 CDS YP_001433574.1 156743445 5541005 complement(4574116..4574496) 1 NC_009767.1 KEGG: nca:Noca_4101 hypothetical protein; hypothetical protein 4574496 5541005 Rcas_3506 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433574.1 4574116 R 383372 CDS YP_001433575.1 156743446 5541006 complement(4574576..4575256) 1 NC_009767.1 KEGG: ava:Ava_2261 hypothetical protein; hypothetical protein 4575256 5541006 Rcas_3507 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433575.1 4574576 R 383372 CDS YP_001433576.1 156743447 5541007 4575357..4576097 1 NC_009767.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: gtn:GTNG_2203 transcriptional regulator GntR family; GntR family transcriptional regulator 4576097 5541007 Rcas_3508 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001433576.1 4575357 D 383372 CDS YP_001433577.1 156743448 5541008 complement(4576112..4576966) 1 NC_009767.1 hypothetical protein 4576966 5541008 Rcas_3509 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433577.1 4576112 R 383372 CDS YP_001433578.1 156743449 5541009 complement(4576983..4577882) 1 NC_009767.1 hypothetical protein 4577882 5541009 Rcas_3510 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433578.1 4576983 R 383372 CDS YP_001433579.1 156743450 5541010 complement(4577896..4578711) 1 NC_009767.1 KEGG: sth:STH1729 hypothetical protein; hypothetical protein 4578711 5541010 Rcas_3511 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433579.1 4577896 R 383372 CDS YP_001433580.1 156743451 5541011 complement(4578717..4579169) 1 NC_009767.1 hypothetical protein 4579169 5541011 Rcas_3512 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433580.1 4578717 R 383372 CDS YP_001433581.1 156743452 5541012 complement(4579225..4579701) 1 NC_009767.1 PFAM: protein of unknown function DUF296; KEGG: gme:Gmet_0490 protein of unknown function DUF296; hypothetical protein 4579701 5541012 Rcas_3513 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433581.1 4579225 R 383372 CDS YP_001433582.1 156743453 5541013 4579807..4580280 1 NC_009767.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sus:Acid_7719 redoxin domain protein; alkyl hydroperoxide reductase 4580280 5541013 Rcas_3514 Roseiflexus castenholzii DSM 13941 alkyl hydroperoxide reductase YP_001433582.1 4579807 D 383372 CDS YP_001433583.1 156743454 5541014 4580299..4581192 1 NC_009767.1 PFAM: pyruvate carboxyltransferase; KEGG: sru:SRU_1246 3-hydroxy-3-methylglutaryl-CoA lyase; pyruvate carboxyltransferase 4581192 5541014 Rcas_3515 Roseiflexus castenholzii DSM 13941 pyruvate carboxyltransferase YP_001433583.1 4580299 D 383372 CDS YP_001433584.1 156743455 5541015 4581228..4582460 1 NC_009767.1 KEGG: pth:PTH_2519 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase 4582460 5541015 Rcas_3516 Roseiflexus castenholzii DSM 13941 3-isopropylmalate dehydratase YP_001433584.1 4581228 D 383372 CDS YP_001433585.1 156743456 5541016 4582470..4582982 1 NC_009767.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: mtp:Mthe_0853 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 4582982 5541016 Rcas_3517 Roseiflexus castenholzii DSM 13941 3-isopropylmalate dehydratase small subunit YP_001433585.1 4582470 D 383372 CDS YP_001433586.1 156743457 5541017 4583032..4584234 1 NC_009767.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: acr:Acry_2696 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4584234 5541017 Rcas_3518 Roseiflexus castenholzii DSM 13941 L-carnitine dehydratase/bile acid-inducible protein F YP_001433586.1 4583032 D 383372 CDS YP_001433587.1 156743458 5541018 4584266..4585732 1 NC_009767.1 PFAM: amidohydrolase; KEGG: ana:alr5010 D-hydantoinase; dihydropyrimidinase 4585732 5541018 Rcas_3519 Roseiflexus castenholzii DSM 13941 dihydropyrimidinase YP_001433587.1 4584266 D 383372 CDS YP_001433588.1 156743459 5541019 4586180..4587322 1 NC_009767.1 KEGG: rrs:RoseRS_2152 hypothetical protein; hypothetical protein 4587322 5541019 Rcas_3520 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433588.1 4586180 D 383372 CDS YP_001433589.1 156743460 5541020 complement(4587198..4588343) 1 NC_009767.1 hypothetical protein 4588343 5541020 Rcas_3521 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433589.1 4587198 R 383372 CDS YP_001433590.1 156743461 5541021 complement(4588472..4589629) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2150 glycosyl transferase, group 1; group 1 glycosyl transferase 4589629 5541021 Rcas_3522 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433590.1 4588472 R 383372 CDS YP_001433591.1 156743462 5541022 complement(4589651..4590382) 1 NC_009767.1 KEGG: rrs:RoseRS_2149 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; signal peptidase I 4590382 5541022 Rcas_3523 Roseiflexus castenholzii DSM 13941 signal peptidase I YP_001433591.1 4589651 R 383372 CDS YP_001433592.1 156743463 5541023 4590532..4591524 1 NC_009767.1 KEGG: rrs:RoseRS_2148 pyruvate-formate lyase-activating enzyme-like protein; pyruvate-formate lyase-activating enzyme-like protein 4591524 5541023 Rcas_3524 Roseiflexus castenholzii DSM 13941 pyruvate-formate lyase-activating enzyme-like protein YP_001433592.1 4590532 D 383372 CDS YP_001433593.1 156743464 5541024 4591595..4592014 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_2147 FHA domain containing protein; FHA domain-containing protein 4592014 5541024 Rcas_3525 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001433593.1 4591595 D 383372 CDS YP_001433594.1 156743465 5541025 complement(4592015..4593499) 1 NC_009767.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 4593499 engA 5541025 engA Roseiflexus castenholzii DSM 13941 GTP-binding protein EngA YP_001433594.1 4592015 R 383372 CDS YP_001433595.1 156743466 5541026 complement(4593505..4595193) 1 NC_009767.1 PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rrs:RoseRS_2145 metal dependent phosphohydrolase; metal dependent phosphohydrolase 4595193 5541026 Rcas_3527 Roseiflexus castenholzii DSM 13941 metal dependent phosphohydrolase YP_001433595.1 4593505 R 383372 CDS YP_001433596.1 156743467 5541027 complement(4595227..4596774) 1 NC_009767.1 PFAM: protein of unknown function DUF512; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_2144 protein of unknown function DUF512; hypothetical protein 4596774 5541027 Rcas_3528 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433596.1 4595227 R 383372 CDS YP_001433597.1 156743468 5541028 complement(4597148..4598854) 1 NC_009767.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 4598854 5541028 Rcas_3529 Roseiflexus castenholzii DSM 13941 malate dehydrogenase YP_001433597.1 4597148 R 383372 CDS YP_001433598.1 156743469 5541029 complement(4598986..4600998) 1 NC_009767.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 4600998 5541029 Rcas_3530 Roseiflexus castenholzii DSM 13941 excinuclease ABC subunit B YP_001433598.1 4598986 R 383372 CDS YP_001433599.1 156743470 5541030 4601515..4604781 1 NC_009767.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: rrs:RoseRS_3706 DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 4604781 5541030 Rcas_3531 Roseiflexus castenholzii DSM 13941 DNA mismatch repair protein MutS YP_001433599.1 4601515 D 383372 CDS YP_001433600.1 156743471 5541031 complement(4604784..4605365) 1 NC_009767.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rrs:RoseRS_3707 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 4605365 5541031 Rcas_3532 Roseiflexus castenholzii DSM 13941 isoprenylcysteine carboxyl methyltransferase YP_001433600.1 4604784 R 383372 CDS YP_001433601.1 156743472 5541032 4605458..4606471 1 NC_009767.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rrs:RoseRS_3708 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein 4606471 5541032 Rcas_3533 Roseiflexus castenholzii DSM 13941 glycine cleavage T protein YP_001433601.1 4605458 D 383372 CDS YP_001433602.1 156743473 5541034 complement(4607786..4609576) 1 NC_009767.1 KEGG: rrs:RoseRS_3712 hypothetical protein; hypothetical protein 4609576 5541034 Rcas_3535 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433602.1 4607786 R 383372 CDS YP_001433603.1 156743474 5541035 complement(4609596..4611401) 1 NC_009767.1 KEGG: rrs:RoseRS_3713 hypothetical protein; hypothetical protein 4611401 5541035 Rcas_3536 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433603.1 4609596 R 383372 CDS YP_001433604.1 156743475 5541036 complement(4611598..4612761) 1 NC_009767.1 KEGG: rrs:RoseRS_3714 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; 2-alkenal reductase 4612761 5541036 Rcas_3537 Roseiflexus castenholzii DSM 13941 2-alkenal reductase YP_001433604.1 4611598 R 383372 CDS YP_001433605.1 156743476 5541037 complement(4612842..4614062) 1 NC_009767.1 PFAM: protein of unknown function UPF0118; KEGG: rrs:RoseRS_3715 protein of unknown function UPF0118; hypothetical protein 4614062 5541037 Rcas_3538 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433605.1 4612842 R 383372 CDS YP_001433606.1 156743477 5541038 complement(4615176..4615781) 1 NC_009767.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: rrs:RoseRS_3716 2'-5' RNA ligase; 2'-5' RNA ligase 4615781 5541038 Rcas_3539 Roseiflexus castenholzii DSM 13941 2'-5' RNA ligase YP_001433606.1 4615176 R 383372 CDS YP_001433607.1 156743478 5541039 complement(4615890..4618016) 1 NC_009767.1 PFAM: Polyphosphate kinase; KEGG: rrs:RoseRS_3717 polyphosphate kinase; polyphosphate kinase 4618016 5541039 Rcas_3540 Roseiflexus castenholzii DSM 13941 polyphosphate kinase YP_001433607.1 4615890 R 383372 CDS YP_001433608.1 156743479 5541040 4618527..4619873 1 NC_009767.1 KEGG: rrs:RoseRS_1743 Cna B domain protein; hypothetical protein 4619873 5541040 Rcas_3541 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433608.1 4618527 D 383372 CDS YP_001433609.1 156743480 5541043 complement(4620779..4621396) 1 NC_009767.1 PFAM: protein of unknown function DUF1405; KEGG: rrs:RoseRS_3718 protein of unknown function DUF1405; hypothetical protein 4621396 5541043 Rcas_3542 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433609.1 4620779 R 383372 CDS YP_001433610.1 156743481 5541044 complement(4621670..4622293) 1 NC_009767.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_3719 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 4622293 5541044 Rcas_3543 Roseiflexus castenholzii DSM 13941 hexapaptide repeat-containing transferase YP_001433610.1 4621670 R 383372 CDS YP_001433611.1 156743482 5541045 complement(4622300..4622791) 1 NC_009767.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rrs:RoseRS_3720 peptidylprolyl isomerase; peptidyl-prolyl isomerase 4622791 5541045 Rcas_3544 Roseiflexus castenholzii DSM 13941 peptidyl-prolyl isomerase YP_001433611.1 4622300 R 383372 CDS YP_001433612.1 156743483 5541046 4623344..4624612 1 NC_009767.1 PFAM: peptidase M16 domain protein; KEGG: rrs:RoseRS_2274 peptidase M16 domain protein; peptidase M16 domain-containing protein 4624612 5541046 Rcas_3545 Roseiflexus castenholzii DSM 13941 peptidase M16 domain-containing protein YP_001433612.1 4623344 D 383372 CDS YP_001433613.1 156743484 5541047 4624698..4626008 1 NC_009767.1 PFAM: peptidase M16 domain protein; KEGG: rrs:RoseRS_2273 peptidase M16 domain protein; peptidase M16 domain-containing protein 4626008 5541047 Rcas_3546 Roseiflexus castenholzii DSM 13941 peptidase M16 domain-containing protein YP_001433613.1 4624698 D 383372 CDS YP_001433614.1 156743485 5541048 4625989..4627365 1 NC_009767.1 PFAM: protein of unknown function DUF262; KEGG: pth:PTH_0153 hypothetical protein; hypothetical protein 4627365 5541048 Rcas_3547 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433614.1 4625989 D 383372 CDS YP_001433615.1 156743486 5541049 4627362..4628468 1 NC_009767.1 KEGG: pth:PTH_0154 hypothetical protein; hypothetical protein 4628468 5541049 Rcas_3548 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433615.1 4627362 D 383372 CDS YP_001433616.1 156743487 5541050 4629503..4631347 1 NC_009767.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2272 ABC transporter related; ABC transporter-like protein 4631347 5541050 Rcas_3549 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433616.1 4629503 D 383372 CDS YP_001433617.1 156743488 5541051 4631344..4632075 1 NC_009767.1 KEGG: rrs:RoseRS_2271 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 4632075 5541051 Rcas_3550 Roseiflexus castenholzii DSM 13941 protein tyrosine/serine phosphatase YP_001433617.1 4631344 D 383372 CDS YP_001433618.1 156743489 5541052 4632603..4634501 1 NC_009767.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2270 ABC transporter related; ABC transporter-like protein 4634501 5541052 Rcas_3551 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433618.1 4632603 D 383372 CDS YP_001433619.1 156743490 5541053 complement(4634754..4635332) 1 NC_009767.1 KEGG: rrs:RoseRS_2269 hypothetical protein; hypothetical protein 4635332 5541053 Rcas_3552 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433619.1 4634754 R 383372 CDS YP_001433620.1 156743491 5541054 4635551..4635886 1 NC_009767.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rrs:RoseRS_2268 cupin 2, conserved barrel domain protein; cupin 4635886 5541054 Rcas_3553 Roseiflexus castenholzii DSM 13941 cupin YP_001433620.1 4635551 D 383372 CDS YP_001433621.1 156743492 5541055 complement(4639589..4640383) 1 NC_009767.1 KEGG: rrs:RoseRS_2267 membrane protein-like protein; hypothetical protein 4640383 5541055 Rcas_3554 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433621.1 4639589 R 383372 CDS YP_001433622.1 156743493 5541056 complement(4640399..4640740) 1 NC_009767.1 KEGG: rrs:RoseRS_2266 caa(3)-type oxidase, subunit IV; caa(3)-type oxidase subunit IV 4640740 5541056 Rcas_3555 Roseiflexus castenholzii DSM 13941 caa(3)-type oxidase subunit IV YP_001433622.1 4640399 R 383372 CDS YP_001433623.1 156743494 5541057 complement(4640756..4641367) 1 NC_009767.1 PFAM: cytochrome c oxidase subunit III; KEGG: rrs:RoseRS_2265 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 4641367 5541057 Rcas_3556 Roseiflexus castenholzii DSM 13941 cytochrome c oxidase subunit III YP_001433623.1 4640756 R 383372 CDS YP_001433624.1 156743495 5541058 complement(4641640..4643565) 1 NC_009767.1 KEGG: rrs:RoseRS_2264 cytochrome-c oxidase; TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I type 4643565 5541058 Rcas_3557 Roseiflexus castenholzii DSM 13941 cytochrome c oxidase subunit I type YP_001433624.1 4641640 R 383372 CDS YP_001433625.1 156743496 5541059 complement(4643587..4644699) 1 NC_009767.1 TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: rrs:RoseRS_2263 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 4644699 5541059 Rcas_3558 Roseiflexus castenholzii DSM 13941 cytochrome c oxidase subunit II YP_001433625.1 4643587 R 383372 CDS YP_001433626.1 156743497 5541060 4646434..4648773 1 NC_009767.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 4648773 hppA 5541060 hppA Roseiflexus castenholzii DSM 13941 membrane-bound proton-translocating pyrophosphatase YP_001433626.1 4646434 D 383372 CDS YP_001433627.1 156743498 5541061 complement(4648891..4649277) 1 NC_009767.1 KEGG: rrs:RoseRS_2261 hypothetical protein; hypothetical protein 4649277 5541061 Rcas_3560 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433627.1 4648891 R 383372 CDS YP_001433628.1 156743499 5541062 complement(4649472..4650554) 1 NC_009767.1 PFAM: transposase IS4 family protein; KEGG: fra:Francci3_4220 transposase, IS4; transposase IS4 family protein 4650554 5541062 Rcas_3561 Roseiflexus castenholzii DSM 13941 transposase IS4 family protein YP_001433628.1 4649472 R 383372 CDS YP_001433629.1 156743500 5541063 4650644..4651603 1 NC_009767.1 PFAM: regulatory protein GntR HTH; KEGG: rrs:RoseRS_1355 regulatory protein GntR, HTH; GntR family transcriptional regulator 4651603 5541063 Rcas_3562 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001433629.1 4650644 D 383372 CDS YP_001433630.1 156743501 5541064 4651600..4653654 1 NC_009767.1 PFAM: glycoside hydrolase clan GH-D; KEGG: rrs:RoseRS_1356 glycoside hydrolase, clan GH-D; glycoside hydrolase clan GH-D 4653654 5541064 Rcas_3563 Roseiflexus castenholzii DSM 13941 glycoside hydrolase clan GH-D YP_001433630.1 4651600 D 383372 CDS YP_001433631.1 156743502 5541065 4653848..4654798 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1357 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4654798 5541065 Rcas_3564 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001433631.1 4653848 D 383372 CDS YP_001433632.1 156743503 5541066 4654798..4655673 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1358 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4655673 5541066 Rcas_3565 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport systems inner membrane component YP_001433632.1 4654798 D 383372 CDS YP_001433633.1 156743504 5541067 4655754..4657118 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_1359 extracellular solute-binding protein, family 1; extracellular solute-binding protein 4657118 5541067 Rcas_3566 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001433633.1 4655754 D 383372 CDS YP_001433634.1 156743505 5541068 4657124..4659151 1 NC_009767.1 PFAM: glycoside hydrolase clan GH-D; KEGG: rrs:RoseRS_1360 glycoside hydrolase, clan GH-D; glycoside hydrolase clan GH-D 4659151 5541068 Rcas_3567 Roseiflexus castenholzii DSM 13941 glycoside hydrolase clan GH-D YP_001433634.1 4657124 D 383372 CDS YP_001433635.1 156743506 5541069 4659333..4660325 1 NC_009767.1 KEGG: rrs:RoseRS_1361 hypothetical protein; hypothetical protein 4660325 5541069 Rcas_3568 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433635.1 4659333 D 383372 CDS YP_001433636.1 156743507 5541070 4660322..4661095 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_1362 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4661095 5541070 Rcas_3569 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433636.1 4660322 D 383372 CDS YP_001433637.1 156743508 5541071 4661564..4663975 1 NC_009767.1 KEGG: rrs:RoseRS_1363 spermine synthase; spermine synthase 4663975 5541071 Rcas_3570 Roseiflexus castenholzii DSM 13941 spermine synthase YP_001433637.1 4661564 D 383372 CDS YP_001433638.1 156743509 5541072 4664115..4665113 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_1364 oxidoreductase domain protein; oxidoreductase domain-containing protein 4665113 5541072 Rcas_3571 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001433638.1 4664115 D 383372 CDS YP_001433639.1 156743510 5541073 4665152..4666231 1 NC_009767.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_1365 oxidoreductase domain protein; oxidoreductase domain-containing protein 4666231 5541073 Rcas_3572 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001433639.1 4665152 D 383372 CDS YP_001433640.1 156743511 5541074 4666337..4666957 1 NC_009767.1 KEGG: rrs:RoseRS_1366 hypothetical protein; hypothetical protein 4666957 5541074 Rcas_3573 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433640.1 4666337 D 383372 CDS YP_001433641.1 156743512 5541075 4666960..4667226 1 NC_009767.1 TIGRFAM: conserved hypothetical selenoprotein; KEGG: rrs:RoseRS_1367 conserved hypothetical selenoprotein; selenoprotein 4667226 5541075 Rcas_3574 Roseiflexus castenholzii DSM 13941 selenoprotein YP_001433641.1 4666960 D 383372 CDS YP_001433642.1 156743513 5541076 complement(4667195..4667746) 1 NC_009767.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rrs:RoseRS_1368 pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 4667746 5541076 Rcas_3575 Roseiflexus castenholzii DSM 13941 pyruvate ferredoxin/flavodoxin oxidoreductase YP_001433642.1 4667195 R 383372 CDS YP_001433643.1 156743514 5541077 complement(4668687..4669436) 1 NC_009767.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rrs:RoseRS_1369 thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein 4669436 5541077 Rcas_3576 Roseiflexus castenholzii DSM 13941 thiamine pyrophosphate binding domain-containing protein YP_001433643.1 4668687 R 383372 CDS YP_001433644.1 156743515 5541078 complement(4669433..4670536) 1 NC_009767.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: rrs:RoseRS_1370 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 4670536 5541078 Rcas_3577 Roseiflexus castenholzii DSM 13941 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001433644.1 4669433 R 383372 CDS YP_001433645.1 156743516 5541079 complement(4670576..4670848) 1 NC_009767.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_1371 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4670848 5541079 Rcas_3578 Roseiflexus castenholzii DSM 13941 4Fe-4S ferredoxin YP_001433645.1 4670576 R 383372 CDS YP_001433646.1 156743517 5541080 complement(4670861..4672090) 1 NC_009767.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_1372 radical SAM domain protein; radical SAM domain-containing protein 4672090 5541080 Rcas_3579 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001433646.1 4670861 R 383372 CDS YP_001433647.1 156743518 5541081 complement(4672107..4673420) 1 NC_009767.1 KEGG: rrs:RoseRS_1373 hypothetical protein; hypothetical protein 4673420 5541081 Rcas_3580 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433647.1 4672107 R 383372 CDS YP_001433648.1 156743519 5541082 4673602..4674639 1 NC_009767.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_1374 GHMP kinase; GHMP kinase 4674639 5541082 Rcas_3581 Roseiflexus castenholzii DSM 13941 GHMP kinase YP_001433648.1 4673602 D 383372 CDS YP_001433649.1 156743520 5541083 4675347..4676264 1 NC_009767.1 PFAM: Indigoidine synthase A family protein; KEGG: rrs:RoseRS_1375 indigoidine synthase A family protein; indigoidine synthase A family protein 4676264 5541083 Rcas_3582 Roseiflexus castenholzii DSM 13941 indigoidine synthase A family protein YP_001433649.1 4675347 D 383372 CDS YP_001433650.1 156743521 5541084 4676261..4677460 1 NC_009767.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 4677460 5541084 Rcas_3583 Roseiflexus castenholzii DSM 13941 ribosomal RNA large subunit methyltransferase N YP_001433650.1 4676261 D 383372 CDS YP_001433651.1 156743522 5541085 4677637..4678803 1 NC_009767.1 PFAM: aminotransferase class V; KEGG: rrs:RoseRS_1377 aminotransferase, class V; class V aminotransferase 4678803 5541085 Rcas_3584 Roseiflexus castenholzii DSM 13941 class V aminotransferase YP_001433651.1 4677637 D 383372 CDS YP_001433652.1 156743523 5541086 complement(4678816..4680633) 1 NC_009767.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: rrs:RoseRS_1255 oligoendopeptidase F; oligoendopeptidase F 4680633 5541086 Rcas_3585 Roseiflexus castenholzii DSM 13941 oligoendopeptidase F YP_001433652.1 4678816 R 383372 CDS YP_001433653.1 156743524 5541087 complement(4680656..4682821) 1 NC_009767.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: rrs:RoseRS_0947 CHAD domain containing protein; CHAD domain-containing protein 4682821 5541087 Rcas_3586 Roseiflexus castenholzii DSM 13941 CHAD domain-containing protein YP_001433653.1 4680656 R 383372 CDS YP_001433654.1 156743525 5541088 4682997..4683266 1 NC_009767.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 4683266 rpsO 5541088 rpsO Roseiflexus castenholzii DSM 13941 30S ribosomal protein S15 YP_001433654.1 4682997 D 383372 CDS YP_001433655.1 156743526 5541089 4683571..4685811 1 NC_009767.1 KEGG: rrs:RoseRS_0949 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 2 domain protein; KH type 1 domain protein; SMART: KH domain protein; polynucleotide phosphorylase 4685811 5541089 Rcas_3588 Roseiflexus castenholzii DSM 13941 polynucleotide phosphorylase YP_001433655.1 4683571 D 383372 CDS YP_001433656.1 156743527 5541090 4685914..4687128 1 NC_009767.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: rrs:RoseRS_0950 citrate transporter; citrate transporter 4687128 5541090 Rcas_3589 Roseiflexus castenholzii DSM 13941 citrate transporter YP_001433656.1 4685914 D 383372 CDS YP_001433657.1 156743528 5541091 complement(4687131..4687826) 1 NC_009767.1 PFAM: Abortive infection protein; KEGG: rrs:RoseRS_0951 abortive infection protein; abortive infection protein 4687826 5541091 Rcas_3590 Roseiflexus castenholzii DSM 13941 abortive infection protein YP_001433657.1 4687131 R 383372 CDS YP_001433658.1 156743529 5541092 complement(4687823..4688158) 1 NC_009767.1 hypothetical protein 4688158 5541092 Rcas_3591 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433658.1 4687823 R 383372 CDS YP_001433659.1 156743530 5541093 complement(4688182..4689246) 1 NC_009767.1 PFAM: GHMP kinase; KEGG: rrs:RoseRS_0952 GHMP kinase; GHMP kinase 4689246 5541093 Rcas_3592 Roseiflexus castenholzii DSM 13941 GHMP kinase YP_001433659.1 4688182 R 383372 CDS YP_001433660.1 156743531 5541094 complement(4689215..4690333) 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0953 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 4690333 5541094 Rcas_3593 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001433660.1 4689215 R 383372 CDS YP_001433661.1 156743532 5541095 complement(4691015..4692739) 1 NC_009767.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rrs:RoseRS_0954 thiamine pyrophosphate enzyme TPP binding domain protein; thiamine pyrophosphate binding domain-containing protein 4692739 5541095 Rcas_3594 Roseiflexus castenholzii DSM 13941 thiamine pyrophosphate binding domain-containing protein YP_001433661.1 4691015 R 383372 CDS YP_001433662.1 156743533 5541096 4692875..4693195 1 NC_009767.1 KEGG: rrs:RoseRS_0955 hypothetical protein; hypothetical protein 4693195 5541096 Rcas_3595 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433662.1 4692875 D 383372 CDS YP_001433663.1 156743534 5541097 4694701..4695537 1 NC_009767.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rrs:RoseRS_0956 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta 4695537 5541097 Rcas_3596 Roseiflexus castenholzii DSM 13941 electron transfer flavoprotein subunit alpha/beta YP_001433663.1 4694701 D 383372 CDS YP_001433664.1 156743535 5541098 4695542..4696570 1 NC_009767.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_0957 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 4696570 5541098 Rcas_3597 Roseiflexus castenholzii DSM 13941 electron transfer flavoprotein subunit alpha YP_001433664.1 4695542 D 383372 CDS YP_001433665.1 156743536 5541099 4696548..4697864 1 NC_009767.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_0958 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 4697864 5541099 Rcas_3598 Roseiflexus castenholzii DSM 13941 electron-transferring-flavoprotein dehydrogenase YP_001433665.1 4696548 D 383372 CDS YP_001433666.1 156743537 5541100 4697868..4698203 1 NC_009767.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_0959 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4698203 5541100 Rcas_3599 Roseiflexus castenholzii DSM 13941 4Fe-4S ferredoxin YP_001433666.1 4697868 D 383372 CDS YP_001433667.1 156743538 5541101 complement(4698272..4699918) 1 NC_009767.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0960 histidine kinase; histidine kinase 4699918 5541101 Rcas_3600 Roseiflexus castenholzii DSM 13941 histidine kinase YP_001433667.1 4698272 R 383372 CDS YP_001433668.1 156743539 5541102 complement(4699923..4701266) 1 NC_009767.1 KEGG: mlo:mll3244 hypothetical protein; hypothetical protein 4701266 5541102 Rcas_3601 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433668.1 4699923 R 383372 CDS YP_001433669.1 156743540 5541103 complement(4701273..4702007) 1 NC_009767.1 KEGG: mlo:mll3246 hypothetical protein; hypothetical protein 4702007 5541103 Rcas_3602 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433669.1 4701273 R 383372 CDS YP_001433670.1 156743541 5541104 complement(4702004..4702528) 1 NC_009767.1 KEGG: cme:CMF181C small GTP-binding protein of Rab family; TIGRFAM: small GTP-binding protein; PFAM: Miro domain protein; Ras family protein; SMART: Ras small GTPase, Ras type; Ras small GTPase, Rho type; Ras small GTPase, Rab type; small GTP-binding protein 4702528 5541104 Rcas_3603 Roseiflexus castenholzii DSM 13941 small GTP-binding protein YP_001433670.1 4702004 R 383372 CDS YP_001433671.1 156743542 5541105 4702858..4704717 1 NC_009767.1 KEGG: rrs:RoseRS_3371 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; metal dependent phophohydrolase; PFAM: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase HD region; PAS/PAC sensor protein 4704717 5541105 Rcas_3604 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001433671.1 4702858 D 383372 CDS YP_001433672.1 156743543 5541106 complement(4706393..4707181) 1 NC_009767.1 PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0962 methyltransferase type 12; type 11 methyltransferase 4707181 5541106 Rcas_3605 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001433672.1 4706393 R 383372 CDS YP_001433673.1 156743544 5541107 complement(4707159..4707773) 1 NC_009767.1 KEGG: rrs:RoseRS_0963 hypothetical protein; hypothetical protein 4707773 5541107 Rcas_3606 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433673.1 4707159 R 383372 CDS YP_001433674.1 156743545 5541108 complement(4707872..4708546) 1 NC_009767.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: rrs:RoseRS_3933 thiamine pyrophosphokinase; thiamine pyrophosphokinase 4708546 5541108 Rcas_3607 Roseiflexus castenholzii DSM 13941 thiamine pyrophosphokinase YP_001433674.1 4707872 R 383372 CDS YP_001433675.1 156743546 5541109 complement(4708554..4709420) 1 NC_009767.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rrs:RoseRS_3934 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4709420 5541109 Rcas_3608 Roseiflexus castenholzii DSM 13941 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001433675.1 4708554 R 383372 CDS YP_001433676.1 156743547 5541110 complement(4712322..4715033) 1 NC_009767.1 PFAM: Forkhead-associated protein; ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: rrs:RoseRS_3935 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; FHA modulated ABC efflux pump ATPase/integral membrane protein 4715033 5541110 Rcas_3609 Roseiflexus castenholzii DSM 13941 FHA modulated ABC efflux pump ATPase/integral membrane protein YP_001433676.1 4712322 R 383372 CDS YP_001433677.1 156743548 5541111 complement(4715366..4718617) 1 NC_009767.1 PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_3936 hypothetical protein; FHA domain-containing protein 4718617 5541111 Rcas_3610 Roseiflexus castenholzii DSM 13941 FHA domain-containing protein YP_001433677.1 4715366 R 383372 CDS YP_001433678.1 156743549 5541113 4718997..4721168 1 NC_009767.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: rrs:RoseRS_3939 amylo-alpha-1,6-glucosidase; amylo-alpha-1,6-glucosidase 4721168 5541113 Rcas_3611 Roseiflexus castenholzii DSM 13941 amylo-alpha-1,6-glucosidase YP_001433678.1 4718997 D 383372 CDS YP_001433679.1 156743550 5541114 complement(4722552..4723787) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_3940 extracellular solute-binding protein, family 1; extracellular solute-binding protein 4723787 5541114 Rcas_3612 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001433679.1 4722552 R 383372 CDS YP_001433680.1 156743551 5541115 complement(4723859..4724476) 1 NC_009767.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: rrs:RoseRS_3941 NADP oxidoreductase, coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase 4724476 5541115 Rcas_3613 Roseiflexus castenholzii DSM 13941 coenzyme F420-dependent NADP oxidoreductase YP_001433680.1 4723859 R 383372 CDS YP_001433681.1 156743552 5541116 complement(4724473..4725477) 1 NC_009767.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: rrs:RoseRS_3942 ATPase, BadF/BadG/BcrA/BcrD type; BadF/BadG/BcrA/BcrD type ATPase 4725477 5541116 Rcas_3614 Roseiflexus castenholzii DSM 13941 BadF/BadG/BcrA/BcrD type ATPase YP_001433681.1 4724473 R 383372 CDS YP_001433682.1 156743553 5541117 complement(4725483..4726772) 1 NC_009767.1 PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: rrs:RoseRS_3943 alpha-L-fucosidase; alpha-L-fucosidase 4726772 5541117 Rcas_3615 Roseiflexus castenholzii DSM 13941 alpha-L-fucosidase YP_001433682.1 4725483 R 383372 CDS YP_001433683.1 156743554 5541118 complement(4726807..4727763) 1 NC_009767.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_3944 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 4727763 5541118 Rcas_3616 Roseiflexus castenholzii DSM 13941 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001433683.1 4726807 R 383372 CDS YP_001433684.1 156743555 5541119 complement(4727795..4728529) 1 NC_009767.1 PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_3945 beta-lactamase domain protein; beta-lactamase domain-containing protein 4728529 5541119 Rcas_3617 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001433684.1 4727795 R 383372 CDS YP_001433685.1 156743556 5541120 4728976..4729344 1 NC_009767.1 PFAM: regulatory protein ArsR; KEGG: rrs:RoseRS_1709 regulatory protein, ArsR; ArsR family transcriptional regulator 4729344 5541120 Rcas_3618 Roseiflexus castenholzii DSM 13941 ArsR family transcriptional regulator YP_001433685.1 4728976 D 383372 CDS YP_001433686.1 156743557 5541121 4729352..4729591 1 NC_009767.1 TIGRFAM: redox-active disulfide protein 2; KEGG: rrs:RoseRS_1708 redox-active disulfide protein 2; redox-active disulfide protein 2 4729591 5541121 Rcas_3619 Roseiflexus castenholzii DSM 13941 redox-active disulfide protein 2 YP_001433686.1 4729352 D 383372 CDS YP_001433687.1 156743558 5541122 4729684..4730739 1 NC_009767.1 PFAM: permease; KEGG: rrs:RoseRS_1707 permease; permease 4730739 5541122 Rcas_3620 Roseiflexus castenholzii DSM 13941 permease YP_001433687.1 4729684 D 383372 CDS YP_001433688.1 156743559 5541123 4730839..4731594 1 NC_009767.1 PFAM: protein of unknown function DUF81; KEGG: rrs:RoseRS_2089 protein of unknown function DUF81; hypothetical protein 4731594 5541123 Rcas_3621 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433688.1 4730839 D 383372 CDS YP_001433689.1 156743560 5541124 4731615..4732067 1 NC_009767.1 hypothetical protein 4732067 5541124 Rcas_3622 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433689.1 4731615 D 383372 CDS YP_001433690.1 156743561 5541125 complement(4732992..4733651) 1 NC_009767.1 TIGRFAM: glutaredoxin-like domain protein; KEGG: rrs:RoseRS_3949 glutaredoxin-like domain protein; glutaredoxin-like domain-containing protein 4733651 5541125 Rcas_3623 Roseiflexus castenholzii DSM 13941 glutaredoxin-like domain-containing protein YP_001433690.1 4732992 R 383372 CDS YP_001433691.1 156743562 5541126 complement(4733721..4734506) 1 NC_009767.1 PFAM: LmbE family protein; KEGG: rrs:RoseRS_3950 LmbE family protein; LmbE family protein 4734506 5541126 Rcas_3624 Roseiflexus castenholzii DSM 13941 LmbE family protein YP_001433691.1 4733721 R 383372 CDS YP_001433692.1 156743563 5541127 4734734..4735168 1 NC_009767.1 KEGG: rrs:RoseRS_3951 hypothetical protein; hypothetical protein 4735168 5541127 Rcas_3625 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433692.1 4734734 D 383372 CDS YP_001433693.1 156743564 5541128 4735169..4736410 1 NC_009767.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3952 major facilitator superfamily MFS_1; major facilitator transporter 4736410 5541128 Rcas_3626 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001433693.1 4735169 D 383372 CDS YP_001433694.1 156743565 5541129 complement(4736489..4736908) 1 NC_009767.1 KEGG: rrs:RoseRS_1018 hypothetical protein; hypothetical protein 4736908 5541129 Rcas_3627 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433694.1 4736489 R 383372 CDS YP_001433695.1 156743566 5541130 4737675..4738868 1 NC_009767.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rrs:RoseRS_3954 DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase 4738868 5541130 Rcas_3628 Roseiflexus castenholzii DSM 13941 glutamine--scyllo-inositol transaminase YP_001433695.1 4737675 D 383372 CDS YP_001433696.1 156743567 5541131 4738852..4740069 1 NC_009767.1 PFAM: protein of unknown function DUF52; KEGG: rrs:RoseRS_3955 protein of unknown function DUF52; hypothetical protein 4740069 5541131 Rcas_3629 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433696.1 4738852 D 383372 CDS YP_001433697.1 156743568 5541132 4740931..4741698 1 NC_009767.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rrs:RoseRS_3956 SH3, type 3 domain protein; SH3 type 3 domain-containing protein 4741698 5541132 Rcas_3630 Roseiflexus castenholzii DSM 13941 SH3 type 3 domain-containing protein YP_001433697.1 4740931 D 383372 CDS YP_001433698.1 156743569 5541133 4743953..4744933 1 NC_009767.1 KEGG: rrs:RoseRS_3487 hypothetical protein; hypothetical protein 4744933 5541133 Rcas_3631 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433698.1 4743953 D 383372 CDS YP_001433699.1 156743570 5541134 complement(4746358..4747824) 1 NC_009767.1 PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rrs:RoseRS_3957 beta-lactamase domain protein; beta-lactamase domain-containing protein 4747824 5541134 Rcas_3632 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001433699.1 4746358 R 383372 CDS YP_001433700.1 156743571 5541135 complement(4748791..4749981) 1 NC_009767.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_3958 uncharacterized NAD(FAD)-dependent dehydrogenase-like protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4749981 5541135 Rcas_3633 Roseiflexus castenholzii DSM 13941 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001433700.1 4748791 R 383372 CDS YP_001433701.1 156743572 5541136 complement(4750005..4750670) 1 NC_009767.1 PFAM: protein of unknown function DUF1641; KEGG: rrs:RoseRS_3959 protein of unknown function DUF1641; hypothetical protein 4750670 5541136 Rcas_3634 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433701.1 4750005 R 383372 CDS YP_001433702.1 156743573 5541137 4751001..4751957 1 NC_009767.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rrs:RoseRS_3960 transcriptional regulator, LysR family; LysR family transcriptional regulator 4751957 5541137 Rcas_3635 Roseiflexus castenholzii DSM 13941 LysR family transcriptional regulator YP_001433702.1 4751001 D 383372 CDS YP_001433703.1 156743574 5541138 complement(4752273..4753241) 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4073 glycosyl transferase, family 2; glycosyl transferase family protein 4753241 5541138 Rcas_3636 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433703.1 4752273 R 383372 CDS YP_001433704.1 156743575 5541139 complement(4755711..4757981) 1 NC_009767.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: rrs:RoseRS_4074 glycosyl transferase, group 1; group 1 glycosyl transferase 4757981 5541139 Rcas_3637 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433704.1 4755711 R 383372 CDS YP_001433705.1 156743576 5541140 complement(4758025..4759734) 1 NC_009767.1 KEGG: mxa:MXAN_4618 hypothetical protein; hypothetical protein 4759734 5541140 Rcas_3638 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433705.1 4758025 R 383372 CDS YP_001433706.1 156743577 5541141 complement(4759735..4760175) 1 NC_009767.1 hypothetical protein 4760175 5541141 Rcas_3639 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433706.1 4759735 R 383372 CDS YP_001433707.1 156743578 5541142 complement(4760153..4762249) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_4616 glycosyl transferase family protein; group 1 glycosyl transferase 4762249 5541142 Rcas_3640 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433707.1 4760153 R 383372 CDS YP_001433708.1 156743579 5541143 complement(4762246..4764522) 1 NC_009767.1 KEGG: tte:TTE0500 predicted glycosyltransferase; hypothetical protein 4764522 5541143 Rcas_3641 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433708.1 4762246 R 383372 CDS YP_001433709.1 156743580 5541144 complement(4764581..4765648) 1 NC_009767.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; KEGG: mxa:MXAN_4620 hypothetical protein; type 11 methyltransferase 4765648 5541144 Rcas_3642 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001433709.1 4764581 R 383372 CDS YP_001433710.1 156743581 5541145 complement(4765645..4766976) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4089 ABC transporter related; ABC transporter-like protein 4766976 5541145 Rcas_3643 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001433710.1 4765645 R 383372 CDS YP_001433711.1 156743582 5541146 complement(4767574..4769010) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4094 glycosyl transferase, group 1; group 1 glycosyl transferase 4769010 5541146 Rcas_3644 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433711.1 4767574 R 383372 CDS YP_001433712.1 156743583 5541147 complement(4769672..4770832) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: gbe:GbCGDNIH1_0743 glycosyltransferase; group 1 glycosyl transferase 4770832 5541147 Rcas_3645 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433712.1 4769672 R 383372 CDS YP_001433713.1 156743584 5541148 complement(4770837..4772360) 1 NC_009767.1 PFAM: glycosyl transferase family 2; Methyltransferase type 11; KEGG: syn:slr2120 hypothetical protein; glycosyl transferase family protein 4772360 5541148 Rcas_3646 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433713.1 4770837 R 383372 CDS YP_001433714.1 156743585 5541149 complement(4773406..4774560) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: ssa:SSA_1513 glycosyltransferase; group 1 glycosyl transferase 4774560 5541149 Rcas_3647 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433714.1 4773406 R 383372 CDS YP_001433715.1 156743586 5541150 complement(4774557..4776773) 1 NC_009767.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: mxa:MXAN_4616 glycosyl transferase family protein; glycosyl transferase family protein 4776773 5541150 Rcas_3648 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433715.1 4774557 R 383372 CDS YP_001433716.1 156743587 5541151 complement(4776810..4778912) 1 NC_009767.1 PFAM: Polymorphic membrane protein Chlamydia; Fibronectin type III domain protein; KEGG: rba:RB4375 probable extracellular nuclease; fibronectin type III domain-containing protein 4778912 5541151 Rcas_3649 Roseiflexus castenholzii DSM 13941 fibronectin type III domain-containing protein YP_001433716.1 4776810 R 383372 CDS YP_001433717.1 156743588 5541152 complement(4779329..4780180) 1 NC_009767.1 PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_4096 ABC-2 type transporter; ABC-2 type transporter 4780180 5541152 Rcas_3650 Roseiflexus castenholzii DSM 13941 ABC-2 type transporter YP_001433717.1 4779329 R 383372 CDS YP_001433718.1 156743589 5541153 4780587..4781729 1 NC_009767.1 KEGG: noc:Noc_0388 transposase (probable), IS891/IS1136/IS1341; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; IS605 family transposase OrfB 4781729 5541153 Rcas_3651 Roseiflexus castenholzii DSM 13941 IS605 family transposase OrfB YP_001433718.1 4780587 D 383372 CDS YP_001433719.1 156743590 5541154 complement(4781793..4782374) 1 NC_009767.1 KEGG: rrs:RoseRS_4097 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 4782374 5541154 Rcas_3652 Roseiflexus castenholzii DSM 13941 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001433719.1 4781793 R 383372 CDS YP_001433720.1 156743591 5541155 complement(4782629..4783042) 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_4098 protein of unknown function DUF86; hypothetical protein 4783042 5541155 Rcas_3653 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433720.1 4782629 R 383372 CDS YP_001433721.1 156743592 5541156 complement(4783032..4783445) 1 NC_009767.1 KEGG: rrs:RoseRS_4099 hypothetical protein; hypothetical protein 4783445 5541156 Rcas_3654 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433721.1 4783032 R 383372 CDS YP_001433722.1 156743593 5541157 complement(4783442..4784386) 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2241 protein of unknown function DUF820; hypothetical protein 4784386 5541157 Rcas_3655 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433722.1 4783442 R 383372 CDS YP_001433723.1 156743594 5541158 complement(4784414..4785391) 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_4100 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4785391 5541158 Rcas_3656 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001433723.1 4784414 R 383372 CDS YP_001433724.1 156743595 5541159 complement(4785657..4786214) 1 NC_009767.1 KEGG: rrs:RoseRS_4101 hypothetical protein; hypothetical protein 4786214 5541159 Rcas_3657 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433724.1 4785657 R 383372 CDS YP_001433725.1 156743596 5541160 complement(4786294..4786878) 1 NC_009767.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: rrs:RoseRS_4102 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 4786878 5541160 Rcas_3658 Roseiflexus castenholzii DSM 13941 response regulator receiver/ANTAR domain-containing protein YP_001433725.1 4786294 R 383372 CDS YP_001433726.1 156743597 5541161 4787064..4787882 1 NC_009767.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: rrs:RoseRS_4051 biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 4787882 5541161 Rcas_3659 Roseiflexus castenholzii DSM 13941 biotin--acetyl-CoA-carboxylase ligase YP_001433726.1 4787064 D 383372 CDS YP_001433727.1 156743598 5541162 complement(4789216..4789572) 1 NC_009767.1 KEGG: rrs:RoseRS_4050 hypothetical protein; hypothetical protein 4789572 5541162 Rcas_3660 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433727.1 4789216 R 383372 CDS YP_001433728.1 156743599 5541163 complement(4789613..4790293) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_4049 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4790293 5541163 Rcas_3661 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001433728.1 4789613 R 383372 CDS YP_001433729.1 156743600 5541164 4790428..4791219 1 NC_009767.1 PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_4048 conserved hypothetical protein 730; hypothetical protein 4791219 5541164 Rcas_3662 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433729.1 4790428 D 383372 CDS YP_001433730.1 156743601 5541165 complement(4791352..4792056) 1 NC_009767.1 KEGG: rrs:RoseRS_4047 hypothetical protein; hypothetical protein 4792056 5541165 Rcas_3663 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433730.1 4791352 R 383372 CDS YP_001433731.1 156743602 5541166 complement(4792077..4793141) 1 NC_009767.1 KEGG: rrs:RoseRS_4046 hypothetical protein; hypothetical protein 4793141 5541166 Rcas_3664 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433731.1 4792077 R 383372 CDS YP_001433732.1 156743603 5541167 4793365..4794456 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4045 glycosyl transferase, group 1; group 1 glycosyl transferase 4794456 5541167 Rcas_3665 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433732.1 4793365 D 383372 CDS YP_001433733.1 156743604 5541168 4794596..4795222 1 NC_009767.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4044 hypothetical protein; lipopolysaccharide biosynthesis protein 4795222 5541168 Rcas_3666 Roseiflexus castenholzii DSM 13941 lipopolysaccharide biosynthesis protein YP_001433733.1 4794596 D 383372 CDS YP_001433734.1 156743605 5541169 4795224..4795913 1 NC_009767.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4043 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 4795913 5541169 Rcas_3667 Roseiflexus castenholzii DSM 13941 lipopolysaccharide biosynthesis protein YP_001433734.1 4795224 D 383372 CDS YP_001433735.1 156743606 5541170 4795910..4796611 1 NC_009767.1 KEGG: rrs:RoseRS_4042 non-specific protein-tyrosine kinase; non-specific protein-tyrosine kinase 4796611 5541170 Rcas_3668 Roseiflexus castenholzii DSM 13941 non-specific protein-tyrosine kinase YP_001433735.1 4795910 D 383372 CDS YP_001433736.1 156743607 5541171 4796836..4797219 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_4041 response regulator receiver protein; response regulator receiver protein 4797219 5541171 Rcas_3669 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001433736.1 4796836 D 383372 CDS YP_001433737.1 156743608 5541172 complement(4797258..4798610) 1 NC_009767.1 KEGG: rrs:RoseRS_4040 hypothetical protein; hypothetical protein 4798610 5541172 Rcas_3670 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433737.1 4797258 R 383372 CDS YP_001433738.1 156743609 5541173 complement(4799130..4802234) 1 NC_009767.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_4039 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 4802234 5541173 Rcas_3671 Roseiflexus castenholzii DSM 13941 multi-sensor hybrid histidine kinase YP_001433738.1 4799130 R 383372 CDS YP_001433739.1 156743610 5541174 complement(4802385..4803659) 1 NC_009767.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rrs:RoseRS_4038 cystathionine gamma-synthase; cystathionine gamma-lyase 4803659 5541174 Rcas_3672 Roseiflexus castenholzii DSM 13941 cystathionine gamma-lyase YP_001433739.1 4802385 R 383372 CDS YP_001433740.1 156743611 5541175 complement(4803705..4804409) 1 NC_009767.1 PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_4037 metallophosphoesterase; metallophosphoesterase 4804409 5541175 Rcas_3673 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001433740.1 4803705 R 383372 CDS YP_001433741.1 156743612 5541176 complement(4804692..4805714) 1 NC_009767.1 SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_4032 protein kinase; serine/threonine protein kinase 4805714 5541176 Rcas_3674 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001433741.1 4804692 R 383372 CDS YP_001433742.1 156743613 5541177 complement(4805711..4806166) 1 NC_009767.1 KEGG: rrs:RoseRS_4031 hypothetical protein; hypothetical protein 4806166 5541177 Rcas_3675 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433742.1 4805711 R 383372 CDS YP_001433743.1 156743614 5541178 complement(4807955..4810078) 1 NC_009767.1 KEGG: rrs:RoseRS_4030 hypothetical protein; hypothetical protein 4810078 5541178 Rcas_3676 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433743.1 4807955 R 383372 CDS YP_001433744.1 156743615 5541179 complement(4810382..4812460) 1 NC_009767.1 KEGG: rrs:RoseRS_4029 transcriptional regulator, MerR family; MerR family transcriptional regulator 4812460 5541179 Rcas_3677 Roseiflexus castenholzii DSM 13941 MerR family transcriptional regulator YP_001433744.1 4810382 R 383372 CDS YP_001433745.1 156743616 5541180 4813196..4814074 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_4028 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4814074 5541180 Rcas_3678 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433745.1 4813196 D 383372 CDS YP_001433746.1 156743617 5541181 complement(4814028..4814678) 1 NC_009767.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rrs:RoseRS_4027 cyclic nucleotide-binding protein; Crp/FNR family transcriptional regulator 4814678 5541181 Rcas_3679 Roseiflexus castenholzii DSM 13941 Crp/FNR family transcriptional regulator YP_001433746.1 4814028 R 383372 CDS YP_001433747.1 156743618 5541182 4814919..4815446 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4026 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4815446 5541182 Rcas_3680 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001433747.1 4814919 D 383372 CDS YP_001433748.1 156743619 5541183 4816203..4816934 1 NC_009767.1 PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_3728 peptidase C60, sortase A and B; peptidase C60 sortase A and B 4816934 5541183 Rcas_3681 Roseiflexus castenholzii DSM 13941 peptidase C60 sortase A and B YP_001433748.1 4816203 D 383372 CDS YP_001433749.1 156743620 5541184 4817678..4818814 1 NC_009767.1 PFAM: peptidase M50; KEGG: rrs:RoseRS_1247 peptidase M50; peptidase M50 4818814 5541184 Rcas_3682 Roseiflexus castenholzii DSM 13941 peptidase M50 YP_001433749.1 4817678 D 383372 CDS YP_001433750.1 156743621 5541186 4820380..4821753 1 NC_009767.1 PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_1246 nucleotidyl transferase; nucleotidyl transferase 4821753 5541186 Rcas_3684 Roseiflexus castenholzii DSM 13941 nucleotidyl transferase YP_001433750.1 4820380 D 383372 CDS YP_001433751.1 156743622 5541188 4824131..4824355 1 NC_009767.1 KEGG: rrs:RoseRS_1996 prevent-host-death family protein; prevent-host-death family protein 4824355 5541188 Rcas_3686 Roseiflexus castenholzii DSM 13941 prevent-host-death family protein YP_001433751.1 4824131 D 383372 CDS YP_001433752.1 156743623 5541189 4824352..4824738 1 NC_009767.1 PFAM: PilT protein domain protein; KEGG: rrs:RoseRS_1995 PilT protein domain protein; twitching motility protein PilT 4824738 5541189 Rcas_3687 Roseiflexus castenholzii DSM 13941 twitching motility protein PilT YP_001433752.1 4824352 D 383372 CDS YP_001433753.1 156743624 5541192 4828883..4829320 1 NC_009767.1 hypothetical protein 4829320 5541192 Rcas_3690 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433753.1 4828883 D 383372 CDS YP_001433754.1 156743625 5541193 4829376..4829879 1 NC_009767.1 hypothetical protein 4829879 5541193 Rcas_3691 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433754.1 4829376 D 383372 CDS YP_001433755.1 156743626 5541195 4830307..4831305 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ecs:ECs4134 methyltransferase; DNA methylase N-4/N-6 domain-containing protein 4831305 5541195 Rcas_3693 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001433755.1 4830307 D 383372 CDS YP_001433756.1 156743627 5541196 4831302..4832258 1 NC_009767.1 hypothetical protein 4832258 5541196 Rcas_3694 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433756.1 4831302 D 383372 CDS YP_001433757.1 156743628 5541201 4835683..4836588 1 NC_009767.1 hypothetical protein 4836588 5541201 Rcas_3699 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433757.1 4835683 D 383372 CDS YP_001433758.1 156743629 5541202 complement(4836618..4837307) 1 NC_009767.1 hypothetical protein 4837307 5541202 Rcas_3700 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433758.1 4836618 R 383372 CDS YP_001433759.1 156743630 5541203 complement(4837476..4840670) 1 NC_009767.1 PFAM: TPR repeat-containing protein; transcriptional regulator domain protein; transcriptional activator domain; Tetratricopeptide TPR_4; SMART: AAA ATPase; Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein; SARP family transcriptional regulator 4840670 5541203 Rcas_3701 Roseiflexus castenholzii DSM 13941 SARP family transcriptional regulator YP_001433759.1 4837476 R 383372 CDS YP_001433760.1 156743631 5541204 complement(4840692..4841318) 1 NC_009767.1 PFAM: protein of unknown function DUF1568; KEGG: sus:Acid_5308 protein of unknown function DUF1568; hypothetical protein 4841318 5541204 Rcas_3702 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433760.1 4840692 R 383372 CDS YP_001433761.1 156743632 5541205 4841764..4853832 1 NC_009767.1 SMART: Dystroglycan-type cadherin domain protein; PA14-related domain protein; KEGG: rso:RS05070 hemagglutinin/hemolysin-related protein; dystroglycan-type cadherin domain-containing protein 4853832 5541205 Rcas_3703 Roseiflexus castenholzii DSM 13941 dystroglycan-type cadherin domain-containing protein YP_001433761.1 4841764 D 383372 CDS YP_001433762.1 156743633 5541206 4854278..4854784 1 NC_009767.1 KEGG: tel:tlr0976 hypothetical protein; hypothetical protein 4854784 5541206 Rcas_3704 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433762.1 4854278 D 383372 CDS YP_001433763.1 156743634 5541207 complement(4854775..4859127) 1 NC_009767.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1245 NB-ARC domain protein; hypothetical protein 4859127 5541207 Rcas_3705 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433763.1 4854775 R 383372 CDS YP_001433764.1 156743635 5541208 complement(4859124..4859483) 1 NC_009767.1 KEGG: rrs:RoseRS_1244 hypothetical protein; hypothetical protein 4859483 5541208 Rcas_3706 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433764.1 4859124 R 383372 CDS YP_001433765.1 156743636 5541209 complement(4860112..4860564) 1 NC_009767.1 PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3219 NUDIX hydrolase; NUDIX hydrolase 4860564 5541209 Rcas_3707 Roseiflexus castenholzii DSM 13941 NUDIX hydrolase YP_001433765.1 4860112 R 383372 CDS YP_001433766.1 156743637 5541210 complement(4860582..4861136) 1 NC_009767.1 PFAM: Inorganic pyrophosphatase; KEGG: rrs:RoseRS_3220 inorganic diphosphatase; inorganic diphosphatase 4861136 5541210 Rcas_3708 Roseiflexus castenholzii DSM 13941 inorganic diphosphatase YP_001433766.1 4860582 R 383372 CDS YP_001433767.1 156743638 5541211 complement(4861499..4862458) 1 NC_009767.1 PFAM: protein of unknown function DUF124; KEGG: rrs:RoseRS_3221 protein of unknown function DUF124; hypothetical protein 4862458 5541211 Rcas_3709 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433767.1 4861499 R 383372 CDS YP_001433768.1 156743639 5541212 complement(4862737..4864074) 1 NC_009767.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 4864074 rho 5541212 rho Roseiflexus castenholzii DSM 13941 transcription termination factor Rho YP_001433768.1 4862737 R 383372 CDS YP_001433769.1 156743640 5541213 4864674..4867391 1 NC_009767.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 4867391 alaS 5541213 alaS Roseiflexus castenholzii DSM 13941 alanyl-tRNA synthetase YP_001433769.1 4864674 D 383372 CDS YP_001433770.1 156743641 5541214 4867409..4869403 1 NC_009767.1 KEGG: rrs:RoseRS_3224 hypothetical protein; hypothetical protein 4869403 5541214 Rcas_3712 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433770.1 4867409 D 383372 CDS YP_001433771.1 156743642 5541215 4869432..4869872 1 NC_009767.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: rrs:RoseRS_3225 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF 4869872 5541215 Rcas_3713 Roseiflexus castenholzii DSM 13941 Holliday junction resolvase YqgF YP_001433771.1 4869432 D 383372 CDS YP_001433772.1 156743643 5541216 complement(4869826..4870410) 1 NC_009767.1 KEGG: rrs:RoseRS_3226 hypothetical protein; hypothetical protein 4870410 5541216 Rcas_3714 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433772.1 4869826 R 383372 CDS YP_001433773.1 156743644 5541217 complement(4871871..4872737) 1 NC_009767.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rrs:RoseRS_3227 6-phosphogluconate dehydrogenase, NAD-binding; NADP oxidoreductase coenzyme F420-dependent 4872737 5541217 Rcas_3715 Roseiflexus castenholzii DSM 13941 NADP oxidoreductase coenzyme F420-dependent YP_001433773.1 4871871 R 383372 CDS YP_001433774.1 156743645 5541218 complement(4875108..4876097) 1 NC_009767.1 PFAM: peptidase S58 DmpA; KEGG: rrs:RoseRS_3228 peptidase S58, DmpA; peptidase S58 DmpA 4876097 5541218 Rcas_3716 Roseiflexus castenholzii DSM 13941 peptidase S58 DmpA YP_001433774.1 4875108 R 383372 CDS YP_001433775.1 156743646 5541219 complement(4876100..4876906) 1 NC_009767.1 PFAM: DSBA oxidoreductase; KEGG: rrs:RoseRS_3229 DsbA oxidoreductase; DSBA oxidoreductase 4876906 5541219 Rcas_3717 Roseiflexus castenholzii DSM 13941 DSBA oxidoreductase YP_001433775.1 4876100 R 383372 CDS YP_001433776.1 156743647 5541220 complement(4876908..4877417) 1 NC_009767.1 KEGG: rrs:RoseRS_3230 hypothetical protein; hypothetical protein 4877417 5541220 Rcas_3718 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433776.1 4876908 R 383372 CDS YP_001433777.1 156743648 5541221 complement(4877488..4877835) 1 NC_009767.1 PFAM: protein of unknown function DUF970; KEGG: rrs:RoseRS_3231 protein of unknown function DUF970; hypothetical protein 4877835 5541221 Rcas_3719 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433777.1 4877488 R 383372 CDS YP_001433778.1 156743649 5541222 complement(4877845..4878534) 1 NC_009767.1 PFAM: thymidylate kinase; KEGG: rrs:RoseRS_3232 dTMP kinase; dTMP kinase 4878534 5541222 Rcas_3720 Roseiflexus castenholzii DSM 13941 dTMP kinase YP_001433778.1 4877845 R 383372 CDS YP_001433779.1 156743650 5541223 complement(4878561..4880177) 1 NC_009767.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_3233 single-stranded nucleic acid binding R3H domain protein; single-stranded nucleic acid binding R3H domain-containing protein 4880177 5541223 Rcas_3721 Roseiflexus castenholzii DSM 13941 single-stranded nucleic acid binding R3H domain-containing protein YP_001433779.1 4878561 R 383372 CDS YP_001433780.1 156743651 5541224 complement(4880098..4881168) 1 NC_009767.1 KEGG: rrs:RoseRS_3234 hypothetical protein; hypothetical protein 4881168 5541224 Rcas_3722 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433780.1 4880098 R 383372 CDS YP_001433781.1 156743652 5541225 complement(4881196..4881765) 1 NC_009767.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rrs:RoseRS_3235 SNO glutamine amidotransferase; SNO glutamine amidotransferase 4881765 5541225 Rcas_3723 Roseiflexus castenholzii DSM 13941 SNO glutamine amidotransferase YP_001433781.1 4881196 R 383372 CDS YP_001433782.1 156743653 5541226 complement(4881815..4882696) 1 NC_009767.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 4882696 5541226 Rcas_3724 Roseiflexus castenholzii DSM 13941 pyridoxal biosynthesis lyase PdxS YP_001433782.1 4881815 R 383372 CDS YP_001433783.1 156743654 5541227 complement(4882882..4883487) 1 NC_009767.1 PFAM: manganese and iron superoxide dismutase; KEGG: rrs:RoseRS_3237 superoxide dismutase; superoxide dismutase 4883487 5541227 Rcas_3725 Roseiflexus castenholzii DSM 13941 superoxide dismutase YP_001433783.1 4882882 R 383372 CDS YP_001433784.1 156743655 5541228 complement(4883531..4884169) 1 NC_009767.1 PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: rrs:RoseRS_3238 transcriptional regulator; transcriptional regulator 4884169 5541228 Rcas_3726 Roseiflexus castenholzii DSM 13941 transcriptional regulator YP_001433784.1 4883531 R 383372 CDS YP_001433785.1 156743656 5541229 4884326..4885102 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_3239 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4885102 5541229 Rcas_3727 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433785.1 4884326 D 383372 CDS YP_001433786.1 156743657 5541230 4885115..4886278 1 NC_009767.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rrs:RoseRS_3240 aminotransferase, class I and II; class I/II aminotransferase 4886278 5541230 Rcas_3728 Roseiflexus castenholzii DSM 13941 class I/II aminotransferase YP_001433786.1 4885115 D 383372 CDS YP_001433787.1 156743658 5541231 4886301..4886651 1 NC_009767.1 KEGG: rrs:RoseRS_3241 hypothetical protein; hypothetical protein 4886651 5541231 Rcas_3729 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433787.1 4886301 D 383372 CDS YP_001433788.1 156743659 5541232 4886663..4887346 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3242 glycosyl transferase, family 2; glycosyl transferase family protein 4887346 5541232 Rcas_3730 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001433788.1 4886663 D 383372 CDS YP_001433789.1 156743660 5541233 complement(4888956..4889429) 1 NC_009767.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 4889429 5541233 Rcas_3731 Roseiflexus castenholzii DSM 13941 3-dehydroquinate dehydratase YP_001433789.1 4888956 R 383372 CDS YP_001433790.1 156743661 5541234 complement(4889426..4894894) 1 NC_009767.1 SMART: Parallel beta-helix repeat; KEGG: rrs:RoseRS_3244 parallel beta-helix repeat; parallel beta-helix repeat-containing protein 4894894 5541234 Rcas_3732 Roseiflexus castenholzii DSM 13941 parallel beta-helix repeat-containing protein YP_001433790.1 4889426 R 383372 CDS YP_001433791.1 156743662 5541235 complement(4894910..4899229) 1 NC_009767.1 TIGRFAM: conserved repeat domain; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: rrs:RoseRS_3245 hypothetical protein; hypothetical protein 4899229 5541235 Rcas_3733 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433791.1 4894910 R 383372 CDS YP_001433792.1 156743663 5541236 4899496..4901364 1 NC_009767.1 KEGG: rrs:RoseRS_3246 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 4901364 5541236 Rcas_3734 Roseiflexus castenholzii DSM 13941 molecular chaperone DnaK YP_001433792.1 4899496 D 383372 CDS YP_001433793.1 156743664 5541237 4901919..4902476 1 NC_009767.1 PFAM: Colicin V production protein; KEGG: rrs:RoseRS_3247 colicin V production protein; colicin V production protein 4902476 5541237 Rcas_3735 Roseiflexus castenholzii DSM 13941 colicin V production protein YP_001433793.1 4901919 D 383372 CDS YP_001433794.1 156743665 5541238 complement(4902666..4903868) 1 NC_009767.1 KEGG: rrs:RoseRS_0889 hypothetical protein; hypothetical protein 4903868 5541238 Rcas_3736 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433794.1 4902666 R 383372 CDS YP_001433795.1 156743666 5541239 4904936..4905250 1 NC_009767.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rrs:RoseRS_3248 iojap-like protein; iojap family protein 4905250 5541239 Rcas_3737 Roseiflexus castenholzii DSM 13941 iojap family protein YP_001433795.1 4904936 D 383372 CDS YP_001433796.1 156743667 5541240 4905263..4905451 1 NC_009767.1 KEGG: rrs:RoseRS_3249 hypothetical protein; hypothetical protein 4905451 5541240 Rcas_3738 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433796.1 4905263 D 383372 CDS YP_001433797.1 156743668 5541241 complement(4905509..4906381) 1 NC_009767.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rrs:RoseRS_3250 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 4906381 5541241 Rcas_3739 Roseiflexus castenholzii DSM 13941 succinyl-CoA synthetase subunit alpha YP_001433797.1 4905509 R 383372 CDS YP_001433798.1 156743669 5541242 complement(4906458..4907180) 1 NC_009767.1 PFAM: alanine racemase domain protein; KEGG: rrs:RoseRS_3251 alanine racemase domain protein; alanine racemase 4907180 5541242 Rcas_3740 Roseiflexus castenholzii DSM 13941 alanine racemase YP_001433798.1 4906458 R 383372 CDS YP_001433799.1 156743670 5541243 4907244..4907732 1 NC_009767.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rrs:RoseRS_3252 protein tyrosine phosphatase; protein tyrosine phosphatase 4907732 5541243 Rcas_3741 Roseiflexus castenholzii DSM 13941 protein tyrosine phosphatase YP_001433799.1 4907244 D 383372 CDS YP_001433800.1 156743671 5541244 4907767..4908840 1 NC_009767.1 KEGG: syn:sll1755 hypothetical protein; hypothetical protein 4908840 5541244 Rcas_3742 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433800.1 4907767 D 383372 CDS YP_001433801.1 156743672 5541245 complement(4908844..4910325) 1 NC_009767.1 TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: rrs:RoseRS_3256 chlorophyllide reductase subunit Z; chlorophyllide reductase subunit Z 4910325 5541245 Rcas_3743 Roseiflexus castenholzii DSM 13941 chlorophyllide reductase subunit Z YP_001433801.1 4908844 R 383372 CDS YP_001433802.1 156743673 5541246 complement(4910332..4911600) 1 NC_009767.1 TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: rrs:RoseRS_3257 chlorophyllide reductase subunit Y; chlorophyllide reductase subunit Y 4911600 5541246 Rcas_3744 Roseiflexus castenholzii DSM 13941 chlorophyllide reductase subunit Y YP_001433802.1 4910332 R 383372 CDS YP_001433803.1 156743674 5541247 complement(4912703..4913434) 1 NC_009767.1 PFAM: protein of unknown function DUF169; KEGG: rrs:RoseRS_3259 protein of unknown function DUF169; hypothetical protein 4913434 5541247 Rcas_3745 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433803.1 4912703 R 383372 CDS YP_001433804.1 156743675 5541248 complement(4914721..4915899) 1 NC_009767.1 KEGG: rrs:RoseRS_3260 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X 4915899 5541248 Rcas_3746 Roseiflexus castenholzii DSM 13941 chlorophyllide reductase iron protein subunit X YP_001433804.1 4914721 R 383372 CDS YP_001433805.1 156743676 5541249 complement(4916366..4917337) 1 NC_009767.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3261 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 4917337 5541249 Rcas_3747 Roseiflexus castenholzii DSM 13941 alcohol dehydrogenase YP_001433805.1 4916366 R 383372 CDS YP_001433806.1 156743677 5541250 complement(4917350..4917832) 1 NC_009767.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rrs:RoseRS_3262 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD 4917832 5541250 Rcas_3748 Roseiflexus castenholzii DSM 13941 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD YP_001433806.1 4917350 R 383372 CDS YP_001433807.1 156743678 5541251 4918126..4918971 1 NC_009767.1 PFAM: UspA domain protein; KEGG: rrs:RoseRS_3263 UspA domain protein; UspA domain-containing protein 4918971 5541251 Rcas_3749 Roseiflexus castenholzii DSM 13941 UspA domain-containing protein YP_001433807.1 4918126 D 383372 CDS YP_001433808.1 156743679 5541252 complement(4918952..4919719) 1 NC_009767.1 KEGG: rrs:RoseRS_3264 hypothetical protein; hypothetical protein 4919719 5541252 Rcas_3750 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433808.1 4918952 R 383372 CDS YP_001433809.1 156743680 5541253 complement(4919750..4920970) 1 NC_009767.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; KEGG: rrs:RoseRS_3265 geranylgeranyl reductase; geranylgeranyl reductase 4920970 5541253 Rcas_3751 Roseiflexus castenholzii DSM 13941 geranylgeranyl reductase YP_001433809.1 4919750 R 383372 CDS YP_001433810.1 156743681 5541254 complement(4922397..4923311) 1 NC_009767.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_3266 bacteriochlorophyll/chlorophyll synthetase; bacteriochlorophyll/chlorophyll a synthase 4923311 5541254 Rcas_3752 Roseiflexus castenholzii DSM 13941 bacteriochlorophyll/chlorophyll a synthase YP_001433810.1 4922397 R 383372 CDS YP_001433811.1 156743682 5541255 complement(4923456..4924418) 1 NC_009767.1 KEGG: rrs:RoseRS_3267 hypothetical protein; hypothetical protein 4924418 5541255 Rcas_3753 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433811.1 4923456 R 383372 CDS YP_001433812.1 156743683 5541256 complement(4924518..4926443) 1 NC_009767.1 TIGRFAM: photosynthetic reaction center, M subunit; photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: rrs:RoseRS_3268 photosynthetic reaction center, M subunit; bifunctional photosynthetic reaction center subunit L/M 4926443 5541256 Rcas_3754 Roseiflexus castenholzii DSM 13941 bifunctional photosynthetic reaction center subunit L/M YP_001433812.1 4924518 R 383372 CDS YP_001433813.1 156743684 5541258 complement(4926835..4927002) 1 NC_009767.1 PFAM: antenna complex alpha/beta subunit; KEGG: rrs:RoseRS_3270 antenna complex, alpha/beta subunit; antenna complex alpha/subunit beta 4927002 5541258 Rcas_3756 Roseiflexus castenholzii DSM 13941 antenna complex alpha/subunit beta YP_001433813.1 4926835 R 383372 CDS YP_001433814.1 156743685 5541259 4927506..4928507 1 NC_009767.1 PFAM: regulatory protein MerR; KEGG: rrs:RoseRS_3271 transcriptional regulator, MerR family; MerR family transcriptional regulator 4928507 5541259 Rcas_3757 Roseiflexus castenholzii DSM 13941 MerR family transcriptional regulator YP_001433814.1 4927506 D 383372 CDS YP_001433815.1 156743686 5541260 4928574..4929038 1 NC_009767.1 KEGG: rrs:RoseRS_3272 hypothetical protein; hypothetical protein 4929038 5541260 Rcas_3758 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433815.1 4928574 D 383372 CDS YP_001433816.1 156743687 5541261 complement(4929082..4930017) 1 NC_009767.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rrs:RoseRS_3273 transglutaminase, N-terminal domain protein; transglutaminase domain-containing protein 4930017 5541261 Rcas_3759 Roseiflexus castenholzii DSM 13941 transglutaminase domain-containing protein YP_001433816.1 4929082 R 383372 CDS YP_001433817.1 156743688 5541262 complement(4931187..4932146) 1 NC_009767.1 PFAM: protein of unknown function DUF403; KEGG: rrs:RoseRS_3275 protein of unknown function DUF403; hypothetical protein 4932146 5541262 Rcas_3760 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433817.1 4931187 R 383372 CDS YP_001433818.1 156743689 5541263 complement(4932139..4933569) 1 NC_009767.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rrs:RoseRS_3276 protein of unknown function DUF404; hypothetical protein 4933569 5541263 Rcas_3761 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433818.1 4932139 R 383372 CDS YP_001433819.1 156743690 5541264 4934094..4935113 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_3277 histidine kinase; histidine kinase 4935113 5541264 Rcas_3762 Roseiflexus castenholzii DSM 13941 histidine kinase YP_001433819.1 4934094 D 383372 CDS YP_001433820.1 156743691 5541265 4935110..4935775 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3278 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4935775 5541265 Rcas_3763 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001433820.1 4935110 D 383372 CDS YP_001433821.1 156743692 5541266 4935775..4936605 1 NC_009767.1 KEGG: rrs:RoseRS_3279 hypothetical protein; hypothetical protein 4936605 5541266 Rcas_3764 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433821.1 4935775 D 383372 CDS YP_001433822.1 156743693 5541267 4937501..4938415 1 NC_009767.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3280 ribokinase; ribokinase 4938415 5541267 Rcas_3765 Roseiflexus castenholzii DSM 13941 ribokinase YP_001433822.1 4937501 D 383372 CDS YP_001433823.1 156743694 5541268 4938419..4939108 1 NC_009767.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3281 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 4939108 5541268 Rcas_3766 Roseiflexus castenholzii DSM 13941 HAD family hydrolase YP_001433823.1 4938419 D 383372 CDS YP_001433824.1 156743695 5541269 4939312..4939686 1 NC_009767.1 PFAM: LrgA family protein; KEGG: rrs:RoseRS_3282 LrgA family protein; LrgA family protein 4939686 5541269 Rcas_3767 Roseiflexus castenholzii DSM 13941 LrgA family protein YP_001433824.1 4939312 D 383372 CDS YP_001433825.1 156743696 5541270 4939667..4940389 1 NC_009767.1 PFAM: LrgB family protein; KEGG: rrs:RoseRS_3283 LrgB family protein; LrgB family protein 4940389 5541270 Rcas_3768 Roseiflexus castenholzii DSM 13941 LrgB family protein YP_001433825.1 4939667 D 383372 CDS YP_001433826.1 156743697 5541271 4941135..4942457 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; conserved hypothetical protein; KR domain protein; KEGG: rrs:RoseRS_3285 conserved hypothetical protein 730; hypothetical protein 4942457 5541271 Rcas_3769 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433826.1 4941135 D 383372 CDS YP_001433827.1 156743698 5541272 complement(4942487..4943746) 1 NC_009767.1 PFAM: glycosyl transferase family 28; KEGG: rrs:RoseRS_0907 sterol 3-beta-glucosyltransferase; sterol 3-beta-glucosyltransferase 4943746 5541272 Rcas_3770 Roseiflexus castenholzii DSM 13941 sterol 3-beta-glucosyltransferase YP_001433827.1 4942487 R 383372 CDS YP_001433828.1 156743699 5541273 complement(4943756..4944043) 1 NC_009767.1 PFAM: Fe(II) trafficking protein YggX; KEGG: rrs:RoseRS_0908 Fe(II) trafficking protein YggX; hypothetical protein 4944043 5541273 Rcas_3771 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433828.1 4943756 R 383372 CDS YP_001433829.1 156743700 5541274 4944174..4945265 1 NC_009767.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rrs:RoseRS_0909 alanine dehydrogenase/PNT domain protein; NAD(P) transhydrogenase subunit alpha 4945265 5541274 Rcas_3772 Roseiflexus castenholzii DSM 13941 NAD(P) transhydrogenase subunit alpha YP_001433829.1 4944174 D 383372 CDS YP_001433830.1 156743701 5541275 4945535..4946830 1 NC_009767.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: rrs:RoseRS_0911 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 4946830 5541275 Rcas_3773 Roseiflexus castenholzii DSM 13941 acetyl-CoA hydrolase/transferase YP_001433830.1 4945535 D 383372 CDS YP_001433831.1 156743702 5541276 complement(4946834..4947787) 1 NC_009767.1 PFAM: UspA domain protein; KEGG: rrs:RoseRS_0912 UspA domain protein; UspA domain-containing protein 4947787 5541276 Rcas_3774 Roseiflexus castenholzii DSM 13941 UspA domain-containing protein YP_001433831.1 4946834 R 383372 CDS YP_001433832.1 156743703 5541277 4948015..4948431 1 NC_009767.1 PFAM: UspA domain protein; KEGG: rrs:RoseRS_0913 UspA domain protein; UspA domain-containing protein 4948431 5541277 Rcas_3775 Roseiflexus castenholzii DSM 13941 UspA domain-containing protein YP_001433832.1 4948015 D 383372 CDS YP_001433833.1 156743704 5541278 4948480..4949373 1 NC_009767.1 PFAM: UspA domain protein; KEGG: rrs:RoseRS_0914 UspA domain protein; UspA domain-containing protein 4949373 5541278 Rcas_3776 Roseiflexus castenholzii DSM 13941 UspA domain-containing protein YP_001433833.1 4948480 D 383372 CDS YP_001433834.1 156743705 5541279 complement(4949600..4950301) 1 NC_009767.1 KEGG: rrs:RoseRS_0915 phosphoribosyltransferase-like protein; phosphoribosyltransferase-like protein 4950301 5541279 Rcas_3777 Roseiflexus castenholzii DSM 13941 phosphoribosyltransferase-like protein YP_001433834.1 4949600 R 383372 CDS YP_001433835.1 156743706 5541280 complement(4950319..4950996) 1 NC_009767.1 PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_0916 CBS domain containing protein; hypothetical protein 4950996 5541280 Rcas_3778 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433835.1 4950319 R 383372 CDS YP_001433836.1 156743707 5541281 4951452..4951940 1 NC_009767.1 PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_0917 CBS domain containing protein; hypothetical protein 4951940 5541281 Rcas_3779 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433836.1 4951452 D 383372 CDS YP_001433837.1 156743708 5541282 complement(4952173..4953060) 1 NC_009767.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 4953060 5541282 Rcas_3780 Roseiflexus castenholzii DSM 13941 ribonucleotide-diphosphate reductase subunit beta YP_001433837.1 4952173 R 383372 CDS YP_001433838.1 156743709 5541283 complement(4953057..4954052) 1 NC_009767.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rrs:RoseRS_1974 transcriptional regulator, LysR family; LysR family transcriptional regulator 4954052 5541283 Rcas_3781 Roseiflexus castenholzii DSM 13941 LysR family transcriptional regulator YP_001433838.1 4953057 R 383372 CDS YP_001433839.1 156743710 5541284 complement(4954067..4955191) 1 NC_009767.1 TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: cpf:CPF_1624 calcium/proton exchanger; calcium/cation antiporter 4955191 5541284 Rcas_3782 Roseiflexus castenholzii DSM 13941 calcium/cation antiporter YP_001433839.1 4954067 R 383372 CDS YP_001433840.1 156743711 5541285 4955344..4955772 1 NC_009767.1 PFAM: CoA-binding domain protein; KEGG: rrs:RoseRS_1976 CoA-binding domain protein; CoA-binding domain-containing protein 4955772 5541285 Rcas_3783 Roseiflexus castenholzii DSM 13941 CoA-binding domain-containing protein YP_001433840.1 4955344 D 383372 CDS YP_001433841.1 156743712 5541286 4955816..4956994 1 NC_009767.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: rrs:RoseRS_1977 N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase 4956994 5541286 Rcas_3784 Roseiflexus castenholzii DSM 13941 N-acylglucosamine 2-epimerase YP_001433841.1 4955816 D 383372 CDS YP_001433842.1 156743713 5541287 complement(4956938..4957693) 1 NC_009767.1 KEGG: rrs:RoseRS_1978 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 4957693 5541287 Rcas_3785 Roseiflexus castenholzii DSM 13941 WecB/TagA/CpsF family glycosyl transferase YP_001433842.1 4956938 R 383372 CDS YP_001433843.1 156743714 5541288 4957812..4959581 1 NC_009767.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rrs:RoseRS_1979 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 4959581 5541288 Rcas_3786 Roseiflexus castenholzii DSM 13941 aspartyl-tRNA synthetase YP_001433843.1 4957812 D 383372 CDS YP_001433844.1 156743715 5541289 4959594..4960169 1 NC_009767.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rrs:RoseRS_1980 ATP--cobalamin adenosyltransferase; ATP--cobalamin adenosyltransferase 4960169 5541289 Rcas_3787 Roseiflexus castenholzii DSM 13941 ATP--cobalamin adenosyltransferase YP_001433844.1 4959594 D 383372 CDS YP_001433845.1 156743716 5541290 4960383..4961033 1 NC_009767.1 KEGG: rrs:RoseRS_3211 hypothetical protein; hypothetical protein 4961033 5541290 Rcas_3788 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433845.1 4960383 D 383372 CDS YP_001433846.1 156743717 5541291 4961937..4962530 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0980 protein of unknown function DUF820; hypothetical protein 4962530 5541291 Rcas_3789 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433846.1 4961937 D 383372 CDS YP_001433847.1 156743718 5541292 4962727..4963320 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0981 protein of unknown function DUF820; hypothetical protein 4963320 5541292 Rcas_3790 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433847.1 4962727 D 383372 CDS YP_001433848.1 156743719 5541293 complement(4963330..4964418) 1 NC_009767.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_0979 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 4964418 5541293 Rcas_3791 Roseiflexus castenholzii DSM 13941 Rieske (2Fe-2S) domain-containing protein YP_001433848.1 4963330 R 383372 CDS YP_001433849.1 156743720 5541294 complement(4964557..4965705) 1 NC_009767.1 KEGG: sth:STH567 hypothetical protein; hypothetical protein 4965705 5541294 Rcas_3792 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433849.1 4964557 R 383372 CDS YP_001433850.1 156743721 5541295 complement(4965702..4966145) 1 NC_009767.1 hypothetical protein 4966145 5541295 Rcas_3793 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433850.1 4965702 R 383372 CDS YP_001433851.1 156743722 5541296 complement(4966145..4966600) 1 NC_009767.1 hypothetical protein 4966600 5541296 Rcas_3794 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433851.1 4966145 R 383372 CDS YP_001433852.1 156743723 5541297 complement(4967038..4968096) 1 NC_009767.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rrs:RoseRS_0975 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 4968096 5541297 Rcas_3795 Roseiflexus castenholzii DSM 13941 hydrogenase expression/formation protein HypE YP_001433852.1 4967038 R 383372 CDS YP_001433853.1 156743724 5541298 complement(4968093..4969208) 1 NC_009767.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rrs:RoseRS_0974 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 4969208 5541298 Rcas_3796 Roseiflexus castenholzii DSM 13941 hydrogenase expression/formation protein HypD YP_001433853.1 4968093 R 383372 CDS YP_001433854.1 156743725 5541299 complement(4969205..4969474) 1 NC_009767.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rrs:RoseRS_0973 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 4969474 5541299 Rcas_3797 Roseiflexus castenholzii DSM 13941 hydrogenase assembly chaperone HypC/HupF YP_001433854.1 4969205 R 383372 CDS YP_001433855.1 156743726 5541300 complement(4969544..4970647) 1 NC_009767.1 PFAM: NHL repeat containing protein; KEGG: msm:MSMEG_2269 NHL repeat protein; NHL repeat-containing protein 4970647 5541300 Rcas_3798 Roseiflexus castenholzii DSM 13941 NHL repeat-containing protein YP_001433855.1 4969544 R 383372 CDS YP_001433856.1 156743727 5541301 complement(4970658..4971533) 1 NC_009767.1 PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_2369 Rieske (2Fe-2S) domain protein; NifU domain-containing protein 4971533 5541301 Rcas_3799 Roseiflexus castenholzii DSM 13941 NifU domain-containing protein YP_001433856.1 4970658 R 383372 CDS YP_001433857.1 156743728 5541302 complement(4971557..4972027) 1 NC_009767.1 hypothetical protein 4972027 5541302 Rcas_3800 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433857.1 4971557 R 383372 CDS YP_001433858.1 156743729 5541303 complement(4972017..4973294) 1 NC_009767.1 PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_0968 hypothetical protein; hypothetical protein 4973294 5541303 Rcas_3801 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433858.1 4972017 R 383372 CDS YP_001433859.1 156743730 5541304 4973389..4973667 1 NC_009767.1 hypothetical protein 4973667 5541304 Rcas_3802 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433859.1 4973389 D 383372 CDS YP_001433860.1 156743731 5541305 complement(4973639..4973944) 1 NC_009767.1 KEGG: mva:Mvan_2367 hydrogenase maturation protease; hydrogenase maturation protease 4973944 5541305 Rcas_3803 Roseiflexus castenholzii DSM 13941 hydrogenase maturation protease YP_001433860.1 4973639 R 383372 CDS YP_001433861.1 156743732 5541306 complement(4973931..4974404) 1 NC_009767.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: msm:MSMEG_2264 peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 4974404 5541306 Rcas_3804 Roseiflexus castenholzii DSM 13941 hydrogenase maturation protease YP_001433861.1 4973931 R 383372 CDS YP_001433862.1 156743733 5541307 complement(4974405..4976027) 1 NC_009767.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: fra:Francci3_1076 hydrogen:quinone oxidoreductase; nickel-dependent hydrogenase large subunit 4976027 5541307 Rcas_3805 Roseiflexus castenholzii DSM 13941 nickel-dependent hydrogenase large subunit YP_001433862.1 4974405 R 383372 CDS YP_001433863.1 156743734 5541308 complement(4976055..4977026) 1 NC_009767.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: fra:Francci3_1077 hydrogenase (NiFe) small subunit (HydA); NADH ubiquinone oxidoreductase 20 kDa subunit 4977026 5541308 Rcas_3806 Roseiflexus castenholzii DSM 13941 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001433863.1 4976055 R 383372 CDS YP_001433864.1 156743735 5541309 complement(4977059..4977754) 1 NC_009767.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: rrs:RoseRS_0972 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 4977754 5541309 Rcas_3807 Roseiflexus castenholzii DSM 13941 hydrogenase nickel incorporation protein HypB YP_001433864.1 4977059 R 383372 CDS YP_001433865.1 156743736 5541310 complement(4977732..4978643) 1 NC_009767.1 KEGG: rrs:RoseRS_0971 hypothetical protein; hypothetical protein 4978643 5541310 Rcas_3808 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433865.1 4977732 R 383372 CDS YP_001433866.1 156743737 5541311 complement(4979268..4980485) 1 NC_009767.1 KEGG: rrs:RoseRS_0968 hypothetical protein; hypothetical protein 4980485 5541311 Rcas_3809 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433866.1 4979268 R 383372 CDS YP_001433867.1 156743738 5541312 complement(4980573..4980989) 1 NC_009767.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: rrs:RoseRS_0967 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 4980989 5541312 Rcas_3810 Roseiflexus castenholzii DSM 13941 hydrogenase nickel incorporation protein HypA YP_001433867.1 4980573 R 383372 CDS YP_001433868.1 156743739 5541313 complement(4981210..4982019) 1 NC_009767.1 PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_0966 beta-lactamase domain protein; beta-lactamase domain-containing protein 4982019 5541313 Rcas_3811 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001433868.1 4981210 R 383372 CDS YP_001433869.1 156743740 5541314 complement(4982032..4982979) 1 NC_009767.1 KEGG: rrs:RoseRS_0965 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 4982979 5541314 Rcas_3812 Roseiflexus castenholzii DSM 13941 ribose-phosphate pyrophosphokinase YP_001433869.1 4982032 R 383372 CDS YP_001433870.1 156743741 5541315 4983561..4984823 1 NC_009767.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rpa:RPA3350 aminotransferase; glutamine--scyllo-inositol transaminase 4984823 5541315 Rcas_3813 Roseiflexus castenholzii DSM 13941 glutamine--scyllo-inositol transaminase YP_001433870.1 4983561 D 383372 CDS YP_001433871.1 156743742 5541318 4986366..4986794 1 NC_009767.1 KEGG: rrs:RoseRS_1885 hypothetical protein; hypothetical protein 4986794 5541318 Rcas_3815 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433871.1 4986366 D 383372 CDS YP_001433872.1 156743743 5541319 4986806..4988614 1 NC_009767.1 KEGG: rrs:RoseRS_1886 hypothetical protein; hypothetical protein 4988614 5541319 Rcas_3816 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433872.1 4986806 D 383372 CDS YP_001433873.1 156743744 5541320 4988621..4988860 1 NC_009767.1 KEGG: rrs:RoseRS_1887 hypothetical protein; hypothetical protein 4988860 5541320 Rcas_3817 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433873.1 4988621 D 383372 CDS YP_001433874.1 156743745 5541321 4988873..4989877 1 NC_009767.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_1888 ATPase associated with various cellular activities, AAA_3; ATPase 4989877 5541321 Rcas_3818 Roseiflexus castenholzii DSM 13941 ATPase YP_001433874.1 4988873 D 383372 CDS YP_001433875.1 156743746 5541322 4990144..4991034 1 NC_009767.1 KEGG: rrs:RoseRS_1889 protein of unknown function DUF58; hypothetical protein 4991034 5541322 Rcas_3819 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433875.1 4990144 D 383372 CDS YP_001433876.1 156743747 5541323 4991048..4992982 1 NC_009767.1 TIGRFAM: conserved hypothetical membrane protein; PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1890 hypothetical protein; hypothetical protein 4992982 5541323 Rcas_3820 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433876.1 4991048 D 383372 CDS YP_001433877.1 156743748 5541324 4992984..4995794 1 NC_009767.1 PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1891 von Willebrand factor, type A; von Willebrand factor A 4995794 5541324 Rcas_3821 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001433877.1 4992984 D 383372 CDS YP_001433878.1 156743749 5541325 4996500..4996976 1 NC_009767.1 KEGG: rrs:RoseRS_1893 hypothetical protein; hypothetical protein 4996976 5541325 Rcas_3822 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433878.1 4996500 D 383372 CDS YP_001433879.1 156743750 5541326 4997170..4998204 1 NC_009767.1 PFAM: aminoglycoside phosphotransferase; KEGG: rrs:RoseRS_1892 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 4998204 5541326 Rcas_3823 Roseiflexus castenholzii DSM 13941 aminoglycoside phosphotransferase YP_001433879.1 4997170 D 383372 CDS YP_001433880.1 156743751 5541327 complement(4998394..4998813) 1 NC_009767.1 PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_1895 CBS domain containing protein; hypothetical protein 4998813 5541327 Rcas_3824 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433880.1 4998394 R 383372 CDS YP_001433881.1 156743752 5541328 complement(4998972..4999280) 1 NC_009767.1 KEGG: rrs:RoseRS_1896 hypothetical protein; hypothetical protein 4999280 5541328 Rcas_3825 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433881.1 4998972 R 383372 CDS YP_001433882.1 156743753 5541329 4999461..5000939 1 NC_009767.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1897 GAF sensor signal transduction histidine kinase; GAF sensor signal transduction histidine kinase 5000939 5541329 Rcas_3826 Roseiflexus castenholzii DSM 13941 GAF sensor signal transduction histidine kinase YP_001433882.1 4999461 D 383372 CDS YP_001433883.1 156743754 5541330 5001354..5001755 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_1955 response regulator receiver protein; response regulator receiver protein 5001755 5541330 Rcas_3827 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001433883.1 5001354 D 383372 CDS YP_001433884.1 156743755 5541331 complement(5001779..5002408) 1 NC_009767.1 KEGG: rrs:RoseRS_1954 hypothetical protein; hypothetical protein 5002408 5541331 Rcas_3828 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433884.1 5001779 R 383372 CDS YP_001433885.1 156743756 5541332 complement(5002412..5004385) 1 NC_009767.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 5004385 5541332 Rcas_3829 Roseiflexus castenholzii DSM 13941 acetoacetyl-CoA synthetase YP_001433885.1 5002412 R 383372 CDS YP_001433886.1 156743757 5541333 complement(5004407..5005483) 1 NC_009767.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 5005483 5541333 Rcas_3830 Roseiflexus castenholzii DSM 13941 chorismate synthase YP_001433886.1 5004407 R 383372 CDS YP_001433887.1 156743758 5541334 complement(5005503..5006897) 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1951 tetratricopeptide TPR_2 repeat protein; hypothetical protein 5006897 5541334 Rcas_3831 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433887.1 5005503 R 383372 CDS YP_001433888.1 156743759 5541335 complement(5006921..5008591) 1 NC_009767.1 PFAM: Amidohydrolase 3; KEGG: rrs:RoseRS_1950 amidohydrolase 3; amidohydrolase 5008591 5541335 Rcas_3832 Roseiflexus castenholzii DSM 13941 amidohydrolase YP_001433888.1 5006921 R 383372 CDS YP_001433889.1 156743760 5541336 5008785..5010983 1 NC_009767.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_1949 diguanylate cyclase; GAF sensor-containing diguanylate cyclase 5010983 5541336 Rcas_3833 Roseiflexus castenholzii DSM 13941 GAF sensor-containing diguanylate cyclase YP_001433889.1 5008785 D 383372 CDS YP_001433890.1 156743761 5541337 complement(5011137..5013722) 1 NC_009767.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rrs:RoseRS_1948 penicillin-binding protein, 1A family; 1A family penicillin-binding protein 5013722 5541337 Rcas_3834 Roseiflexus castenholzii DSM 13941 1A family penicillin-binding protein YP_001433890.1 5011137 R 383372 CDS YP_001433891.1 156743762 5541338 complement(5013808..5014626) 1 NC_009767.1 KEGG: rrs:RoseRS_1947 hypothetical protein; hypothetical protein 5014626 5541338 Rcas_3835 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433891.1 5013808 R 383372 CDS YP_001433892.1 156743763 5541339 5014807..5015658 1 NC_009767.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 5015658 5541339 Rcas_3836 Roseiflexus castenholzii DSM 13941 formamidopyrimidine-DNA glycosylase YP_001433892.1 5014807 D 383372 CDS YP_001433893.1 156743764 5541340 complement(5015624..5016199) 1 NC_009767.1 KEGG: rrs:RoseRS_1943 hypothetical protein; hypothetical protein 5016199 5541340 Rcas_3837 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433893.1 5015624 R 383372 CDS YP_001433894.1 156743765 5541341 complement(5016209..5017093) 1 NC_009767.1 KEGG: rrs:RoseRS_1942 hypothetical protein; hypothetical protein 5017093 5541341 Rcas_3838 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433894.1 5016209 R 383372 CDS YP_001433895.1 156743766 5541344 complement(5019819..5020715) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_1130 oligopeptide/dipeptide ABC transporter, permease; binding-protein-dependent transport system inner membrane protein 5020715 5541344 Rcas_3840 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001433895.1 5019819 R 383372 CDS YP_001433896.1 156743767 5541345 complement(5020708..5021658) 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B0720 ABC-type transporter, permease component: PepT family; binding-protein-dependent transport system inner membrane protein 5021658 5541345 Rcas_3841 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001433896.1 5020708 R 383372 CDS YP_001433897.1 156743768 5541346 complement(5021678..5023384) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: fnu:FN0396 dipeptide-binding protein; extracellular solute-binding protein 5023384 5541346 Rcas_3842 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001433897.1 5021678 R 383372 CDS YP_001433898.1 156743769 5541347 complement(5023605..5024924) 1 NC_009767.1 PFAM: aminotransferase class-III; KEGG: pai:PAE0594 glutamate-1-semialdehyde aminotransferase (hemL); class III aminotransferase 5024924 5541347 Rcas_3843 Roseiflexus castenholzii DSM 13941 class III aminotransferase YP_001433898.1 5023605 R 383372 CDS YP_001433899.1 156743770 5541348 complement(5024921..5025703) 1 NC_009767.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: swi:Swit_0278 transcriptional regulator, GntR family; GntR family transcriptional regulator 5025703 5541348 Rcas_3844 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001433899.1 5024921 R 383372 CDS YP_001433900.1 156743771 5541349 5026004..5027698 1 NC_009767.1 PFAM: extracellular solute-binding protein family 5; KEGG: xac:XAC0856 ABC transporter oligopeptide binding protein; extracellular solute-binding protein 5027698 5541349 Rcas_3845 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001433900.1 5026004 D 383372 CDS YP_001433901.1 156743772 5541350 5027899..5028822 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_2185 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 5028822 5541350 Rcas_3846 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001433901.1 5027899 D 383372 CDS YP_001433902.1 156743773 5541351 5028836..5029729 1 NC_009767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0398 dipeptide transport system permease dppC; binding-protein-dependent transport system inner membrane protein 5029729 5541351 Rcas_3847 Roseiflexus castenholzii DSM 13941 binding-protein-dependent transport system inner membrane protein YP_001433902.1 5028836 D 383372 CDS YP_001433903.1 156743774 5541352 5029785..5030951 1 NC_009767.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mlo:mll7085 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; mandelate racemase/muconate lactonizing protein 5030951 5541352 Rcas_3848 Roseiflexus castenholzii DSM 13941 mandelate racemase/muconate lactonizing protein YP_001433903.1 5029785 D 383372 CDS YP_001433904.1 156743775 5541353 5031008..5032270 1 NC_009767.1 KEGG: rxy:Rxyl_1897 hypothetical protein; hypothetical protein 5032270 5541353 Rcas_3849 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433904.1 5031008 D 383372 CDS YP_001433905.1 156743776 5541354 5032273..5033691 1 NC_009767.1 KEGG: sth:STH1938 hypothetical protein; hypothetical protein 5033691 5541354 Rcas_3850 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433905.1 5032273 D 383372 CDS YP_001433906.1 156743777 5541355 5033741..5034511 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rxy:Rxyl_0541 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5034511 5541355 Rcas_3851 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433906.1 5033741 D 383372 CDS YP_001433907.1 156743778 5541356 5035015..5035989 1 NC_009767.1 PFAM: regulatory protein GntR HTH; KEGG: rrs:RoseRS_1355 regulatory protein GntR, HTH; GntR family transcriptional regulator 5035989 5541356 Rcas_3852 Roseiflexus castenholzii DSM 13941 GntR family transcriptional regulator YP_001433907.1 5035015 D 383372 CDS YP_001433908.1 156743779 5541357 5036152..5037531 1 NC_009767.1 KEGG: sth:STH1938 hypothetical protein; hypothetical protein 5037531 5541357 Rcas_3853 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433908.1 5036152 D 383372 CDS YP_001433909.1 156743780 5541358 5037528..5038532 1 NC_009767.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: atc:AGR_L_249 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 5038532 5541358 Rcas_3854 Roseiflexus castenholzii DSM 13941 succinylglutamate desuccinylase/aspartoacylase YP_001433909.1 5037528 D 383372 CDS YP_001433910.1 156743781 5541359 5038548..5039660 1 NC_009767.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: csc:Csac_2739 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 5039660 5541359 Rcas_3855 Roseiflexus castenholzii DSM 13941 mandelate racemase/muconate lactonizing protein YP_001433910.1 5038548 D 383372 CDS YP_001433911.1 156743782 5541360 5040112..5040636 1 NC_009767.1 KEGG: rrs:RoseRS_1919 hypothetical protein; hypothetical protein 5040636 5541360 Rcas_3856 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433911.1 5040112 D 383372 CDS YP_001433912.1 156743783 5541361 complement(5040640..5041590) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_1936 anti-sigma-factor antagonist; anti-sigma-factor antagonist 5041590 5541361 Rcas_3857 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001433912.1 5040640 R 383372 CDS YP_001433913.1 156743784 5541362 complement(5041587..5042660) 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rrs:RoseRS_1935 anti-sigma-factor antagonist; anti-sigma-factor antagonist 5042660 5541362 Rcas_3858 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001433913.1 5041587 R 383372 CDS YP_001433914.1 156743785 5541363 5042689..5043765 1 NC_009767.1 PFAM: transposase IS4 family protein; KEGG: pna:Pnap_4408 transposase, IS4 family protein; transposase IS4 family protein 5043765 5541363 Rcas_3859 Roseiflexus castenholzii DSM 13941 transposase IS4 family protein YP_001433914.1 5042689 D 383372 CDS YP_001433915.1 156743786 5541365 5044427..5045839 1 NC_009767.1 PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_1934 FAD dependent oxidoreductase; FAD dependent oxidoreductase 5045839 5541365 Rcas_3861 Roseiflexus castenholzii DSM 13941 FAD dependent oxidoreductase YP_001433915.1 5044427 D 383372 CDS YP_001433916.1 156743787 5541366 complement(5046414..5047814) 1 NC_009767.1 PFAM: NERD domain protein; KEGG: rrs:RoseRS_1932 hypothetical protein; NERD domain-containing protein 5047814 5541366 Rcas_3862 Roseiflexus castenholzii DSM 13941 NERD domain-containing protein YP_001433916.1 5046414 R 383372 CDS YP_001433917.1 156743788 5541367 complement(5048026..5049651) 1 NC_009767.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_1931 alpha amylase, catalytic region; alpha amylase 5049651 5541367 Rcas_3863 Roseiflexus castenholzii DSM 13941 alpha amylase YP_001433917.1 5048026 R 383372 CDS YP_001433918.1 156743789 5541368 5050359..5052335 1 NC_009767.1 KEGG: rrs:RoseRS_3306 hypothetical protein; hypothetical protein 5052335 5541368 Rcas_3864 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433918.1 5050359 D 383372 CDS YP_001433919.1 156743790 5541369 complement(5052569..5055151) 1 NC_009767.1 KEGG: rrs:RoseRS_4300 hypothetical protein; hypothetical protein 5055151 5541369 Rcas_3865 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433919.1 5052569 R 383372 CDS YP_001433920.1 156743791 5541370 5055295..5055459 1 NC_009767.1 KEGG: rrs:RoseRS_4299 hypothetical protein; hypothetical protein 5055459 5541370 Rcas_3866 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433920.1 5055295 D 383372 CDS YP_001433921.1 156743792 5541371 5056079..5057131 1 NC_009767.1 PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2797 protein of unknown function DUF820; hypothetical protein 5057131 5541371 Rcas_3867 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433921.1 5056079 D 383372 CDS YP_001433922.1 156743793 5541372 5057442..5058293 1 NC_009767.1 PFAM: photosystem I assembly BtpA; KEGG: rrs:RoseRS_0541 photosystem I assembly BtpA; photosystem I assembly BtpA 5058293 5541372 Rcas_3868 Roseiflexus castenholzii DSM 13941 photosystem I assembly BtpA YP_001433922.1 5057442 D 383372 CDS YP_001433923.1 156743794 5541373 5058344..5059072 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0542 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5059072 5541373 Rcas_3869 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433923.1 5058344 D 383372 CDS YP_001433924.1 156743795 5541374 complement(5059227..5059703) 1 NC_009767.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: rrs:RoseRS_0543 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 5059703 5541374 Rcas_3870 Roseiflexus castenholzii DSM 13941 molybdenum cofactor biosynthesis protein C YP_001433924.1 5059227 R 383372 CDS YP_001433925.1 156743796 5541376 5060091..5062253 1 NC_009767.1 KEGG: rrs:RoseRS_0544 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 5062253 5541376 Rcas_3871 Roseiflexus castenholzii DSM 13941 methylmalonyl-CoA mutase large subunit YP_001433925.1 5060091 D 383372 CDS YP_001433926.1 156743797 5541377 5062250..5064472 1 NC_009767.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 5064472 5541377 Rcas_3872 Roseiflexus castenholzii DSM 13941 methylmalonyl-CoA mutase YP_001433926.1 5062250 D 383372 CDS YP_001433927.1 156743798 5541378 5064469..5065611 1 NC_009767.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 5065611 5541378 Rcas_3873 Roseiflexus castenholzii DSM 13941 arginine/ornithine transport system ATPase YP_001433927.1 5064469 D 383372 CDS YP_001433928.1 156743799 5541379 5066293..5067045 1 NC_009767.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: rrs:RoseRS_0550 FeoA family protein; DtxR family iron dependent repressor 5067045 5541379 Rcas_3874 Roseiflexus castenholzii DSM 13941 DtxR family iron dependent repressor YP_001433928.1 5066293 D 383372 CDS YP_001433929.1 156743800 5541380 5067112..5068611 1 NC_009767.1 KEGG: rrs:RoseRS_0167 nuclease (RecB family)-like protein; recombinase B 5068611 5541380 Rcas_3875 Roseiflexus castenholzii DSM 13941 recombinase B YP_001433929.1 5067112 D 383372 CDS YP_001433930.1 156743801 5541381 complement(5068544..5069011) 1 NC_009767.1 KEGG: rrs:RoseRS_0166 hypothetical protein; hypothetical protein 5069011 5541381 Rcas_3876 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433930.1 5068544 R 383372 CDS YP_001433931.1 156743802 5541382 complement(5069015..5069368) 1 NC_009767.1 KEGG: rrs:RoseRS_0165 hypothetical protein; hypothetical protein 5069368 5541382 Rcas_3877 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433931.1 5069015 R 383372 CDS YP_001433932.1 156743803 5541384 5070127..5073753 1 NC_009767.1 TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG: rrs:RoseRS_0064 methionine synthase; methionine synthase 5073753 5541384 Rcas_3878 Roseiflexus castenholzii DSM 13941 methionine synthase YP_001433932.1 5070127 D 383372 CDS YP_001433933.1 156743804 5541385 5073843..5075018 1 NC_009767.1 PFAM: class II aldolase/adducin family protein; KEGG: rrs:RoseRS_0002 class II aldolase/adducin family protein; class II aldolase/adducin family protein 5075018 5541385 Rcas_3879 Roseiflexus castenholzii DSM 13941 class II aldolase/adducin family protein YP_001433933.1 5073843 D 383372 CDS YP_001433934.1 156743805 5541386 5075134..5075844 1 NC_009767.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_0003 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5075844 5541386 Rcas_3880 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433934.1 5075134 D 383372 CDS YP_001433935.1 156743806 5541387 complement(5076139..5076996) 1 NC_009767.1 KEGG: rrs:RoseRS_0004 hypothetical protein; hypothetical protein 5076996 5541387 Rcas_3881 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433935.1 5076139 R 383372 CDS YP_001433936.1 156743807 5541388 5077209..5078519 1 NC_009767.1 KEGG: rrs:RoseRS_0857 hypothetical protein; hypothetical protein 5078519 5541388 Rcas_3882 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433936.1 5077209 D 383372 CDS YP_001433937.1 156743808 5541389 complement(5078461..5081109) 1 NC_009767.1 KEGG: rrs:RoseRS_0856 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 5081109 5541389 Rcas_3883 Roseiflexus castenholzii DSM 13941 multi-sensor hybrid histidine kinase YP_001433937.1 5078461 R 383372 CDS YP_001433938.1 156743809 5541390 complement(5081313..5082392) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0855 glycosyl transferase, group 1; group 1 glycosyl transferase 5082392 5541390 Rcas_3884 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433938.1 5081313 R 383372 CDS YP_001433939.1 156743810 5541391 5082544..5084841 1 NC_009767.1 KEGG: rrs:RoseRS_0854 hypothetical protein; hypothetical protein 5084841 5541391 Rcas_3885 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433939.1 5082544 D 383372 CDS YP_001433940.1 156743811 5541392 5085330..5087090 1 NC_009767.1 KEGG: rrs:RoseRS_0853 membrane protein-like protein; hypothetical protein 5087090 5541392 Rcas_3886 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433940.1 5085330 D 383372 CDS YP_001433941.1 156743812 5541393 5087102..5089372 1 NC_009767.1 KEGG: rrs:RoseRS_0852 hypothetical protein; hypothetical protein 5089372 5541393 Rcas_3887 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433941.1 5087102 D 383372 CDS YP_001433942.1 156743813 5541394 5089447..5091633 1 NC_009767.1 KEGG: rrs:RoseRS_0850 hypothetical protein; hypothetical protein 5091633 5541394 Rcas_3888 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433942.1 5089447 D 383372 CDS YP_001433943.1 156743814 5541395 5091633..5092478 1 NC_009767.1 PFAM: RNA methylase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0849 methyltransferase type 11; type 11 methyltransferase 5092478 5541395 Rcas_3889 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001433943.1 5091633 D 383372 CDS YP_001433944.1 156743815 5541396 5092479..5094143 1 NC_009767.1 KEGG: rrs:RoseRS_0848 hypothetical protein; hypothetical protein 5094143 5541396 Rcas_3890 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433944.1 5092479 D 383372 CDS YP_001433945.1 156743816 5541397 5094209..5095342 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0847 glycosyl transferase, group 1; group 1 glycosyl transferase 5095342 5541397 Rcas_3891 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433945.1 5094209 D 383372 CDS YP_001433946.1 156743817 5541398 5095727..5096953 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0846 glycosyl transferase, group 1; group 1 glycosyl transferase 5096953 5541398 Rcas_3892 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433946.1 5095727 D 383372 CDS YP_001433947.1 156743818 5541399 5097377..5097949 1 NC_009767.1 KEGG: rrs:RoseRS_0845 hypothetical protein; hypothetical protein 5097949 5541399 Rcas_3893 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433947.1 5097377 D 383372 CDS YP_001433948.1 156743819 5541400 5098013..5099143 1 NC_009767.1 PFAM: permease; KEGG: rrs:RoseRS_0592 permease; permease 5099143 5541400 Rcas_3894 Roseiflexus castenholzii DSM 13941 permease YP_001433948.1 5098013 D 383372 CDS YP_001433949.1 156743820 5541401 complement(5099258..5099734) 1 NC_009767.1 PFAM: ferric-uptake regulator; KEGG: rrs:RoseRS_0593 ferric uptake regulator, Fur family; ferric uptake regulator family protein 5099734 5541401 Rcas_3895 Roseiflexus castenholzii DSM 13941 ferric uptake regulator family protein YP_001433949.1 5099258 R 383372 CDS YP_001433950.1 156743821 5541402 5099931..5100350 1 NC_009767.1 KEGG: rrs:RoseRS_0594 hypothetical protein; hypothetical protein 5100350 5541402 Rcas_3896 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433950.1 5099931 D 383372 CDS YP_001433951.1 156743822 5541403 5100464..5101147 1 NC_009767.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rrs:RoseRS_0595 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 5101147 5541403 Rcas_3897 Roseiflexus castenholzii DSM 13941 Crp/FNR family transcriptional regulator YP_001433951.1 5100464 D 383372 CDS YP_001433952.1 156743823 5541404 5101620..5103023 1 NC_009767.1 KEGG: rrs:RoseRS_0596 hypothetical protein; hypothetical protein 5103023 5541404 Rcas_3898 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433952.1 5101620 D 383372 CDS YP_001433953.1 156743824 5541405 5103027..5104226 1 NC_009767.1 KEGG: rrs:RoseRS_0597 hypothetical protein; hypothetical protein 5104226 5541405 Rcas_3899 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433953.1 5103027 D 383372 CDS YP_001433954.1 156743825 5541406 5105465..5106034 1 NC_009767.1 KEGG: rrs:RoseRS_0598 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 5106034 5541406 Rcas_3900 Roseiflexus castenholzii DSM 13941 cold-shock DNA-binding domain-containing protein YP_001433954.1 5105465 D 383372 CDS YP_001433955.1 156743826 5541407 5106352..5106858 1 NC_009767.1 PFAM: ferric-uptake regulator; KEGG: nca:Noca_1934 ferric-uptake regulator; ferric uptake regulator family protein 5106858 5541407 Rcas_3901 Roseiflexus castenholzii DSM 13941 ferric uptake regulator family protein YP_001433955.1 5106352 D 383372 CDS YP_001433956.1 156743827 5541408 complement(5106874..5107197) 1 NC_009767.1 KEGG: mfa:Mfla_2613 hypothetical protein; hypothetical protein 5107197 5541408 Rcas_3902 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433956.1 5106874 R 383372 CDS YP_001433957.1 156743828 5541409 complement(5107308..5107574) 1 NC_009767.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 5107574 5541409 Rcas_3903 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S18 YP_001433957.1 5107308 R 383372 CDS YP_001433958.1 156743829 5541410 complement(5107571..5107846) 1 NC_009767.1 PFAM: ribosomal protein L28; KEGG: rrs:RoseRS_0601 ribosomal protein L28; 50S ribosomal protein L28 5107846 5541410 Rcas_3904 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L28 YP_001433958.1 5107571 R 383372 CDS YP_001433959.1 156743830 5541411 complement(5107874..5108107) 1 NC_009767.1 KEGG: rrs:RoseRS_0602 hypothetical protein; hypothetical protein 5108107 5541411 Rcas_3905 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433959.1 5107874 R 383372 CDS YP_001433960.1 156743831 5541413 5109580..5110011 1 NC_009767.1 KEGG: rrs:RoseRS_1353 hypothetical protein; hypothetical protein 5110011 5541413 Rcas_3907 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433960.1 5109580 D 383372 CDS YP_001433961.1 156743832 5541414 5110021..5110839 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_1352 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5110839 5541414 Rcas_3908 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001433961.1 5110021 D 383372 CDS YP_001433962.1 156743833 5541415 5110820..5111800 1 NC_009767.1 PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: rrs:RoseRS_1351 ornithine cyclodeaminase; ornithine cyclodeaminase 5111800 5541415 Rcas_3909 Roseiflexus castenholzii DSM 13941 ornithine cyclodeaminase YP_001433962.1 5110820 D 383372 CDS YP_001433963.1 156743834 5541416 complement(5111970..5112473) 1 NC_009767.1 PFAM: cyclic nucleotide-binding; KEGG: rrs:RoseRS_3727 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 5112473 5541416 Rcas_3910 Roseiflexus castenholzii DSM 13941 cyclic nucleotide-binding protein YP_001433963.1 5111970 R 383372 CDS YP_001433964.1 156743835 5541417 5112576..5113160 1 NC_009767.1 KEGG: rrs:RoseRS_3726 hypothetical protein; hypothetical protein 5113160 5541417 Rcas_3911 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433964.1 5112576 D 383372 CDS YP_001433965.1 156743836 5541418 complement(5113403..5114011) 1 NC_009767.1 KEGG: rrs:RoseRS_3725 hypothetical protein; hypothetical protein 5114011 5541418 Rcas_3912 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433965.1 5113403 R 383372 CDS YP_001433966.1 156743837 5541419 complement(5114141..5115010) 1 NC_009767.1 KEGG: rrs:RoseRS_3724 hypothetical protein; hypothetical protein 5115010 5541419 Rcas_3913 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433966.1 5114141 R 383372 CDS YP_001433967.1 156743838 5541420 complement(5115252..5116085) 1 NC_009767.1 Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase 5116085 5541420 Rcas_3914 Roseiflexus castenholzii DSM 13941 D-mannonate oxidoreductase YP_001433967.1 5115252 R 383372 CDS YP_001433968.1 156743839 5541421 5116383..5118371 1 NC_009767.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_3722 alpha amylase, catalytic region; alpha amylase 5118371 5541421 Rcas_3915 Roseiflexus castenholzii DSM 13941 alpha amylase YP_001433968.1 5116383 D 383372 CDS YP_001433969.1 156743840 5541422 5118572..5118958 1 NC_009767.1 KEGG: rrs:RoseRS_3721 hypothetical protein; hypothetical protein 5118958 5541422 Rcas_3916 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433969.1 5118572 D 383372 CDS YP_001433970.1 156743841 5541423 complement(5119110..5119802) 1 NC_009767.1 KEGG: rrs:RoseRS_1449 hypothetical protein; hypothetical protein 5119802 5541423 Rcas_3917 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433970.1 5119110 R 383372 CDS YP_001433971.1 156743842 5541425 complement(5120181..5120579) 1 NC_009767.1 KEGG: rrs:RoseRS_2588 hypothetical protein; hypothetical protein 5120579 5541425 Rcas_3919 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433971.1 5120181 R 383372 CDS YP_001433972.1 156743843 5541426 complement(5120609..5120893) 1 NC_009767.1 KEGG: rrs:RoseRS_2590 hypothetical protein; hypothetical protein 5120893 5541426 Rcas_3920 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433972.1 5120609 R 383372 CDS YP_001433973.1 156743844 5541427 complement(5120890..5121273) 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: rrs:RoseRS_1451 HEPN domain protein; HEPN domain-containing protein 5121273 5541427 Rcas_3921 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001433973.1 5120890 R 383372 CDS YP_001433974.1 156743845 5541428 complement(5121260..5121613) 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_1450 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 5121613 5541428 Rcas_3922 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001433974.1 5121260 R 383372 CDS YP_001433975.1 156743846 5541429 complement(5121750..5122259) 1 NC_009767.1 KEGG: rrs:RoseRS_2591 protein of unknown function DUF324; hypothetical protein 5122259 5541429 Rcas_3923 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433975.1 5121750 R 383372 CDS YP_001433976.1 156743847 5541431 5123520..5124311 1 NC_009767.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 5124311 rpsB 5541431 rpsB Roseiflexus castenholzii DSM 13941 30S ribosomal protein S2 YP_001433976.1 5123520 D 383372 CDS YP_001433977.1 156743848 5541432 5124401..5124931 1 NC_009767.1 TIGRFAM: translation elongation factor Ts; PFAM: ubiquitin-associated- domain-containing protein; Translation elongation factor EFTs/EF1B dimerisation; KEGG: rrs:RoseRS_2018 translation elongation factor Ts; translation elongation factor Ts 5124931 5541432 Rcas_3926 Roseiflexus castenholzii DSM 13941 translation elongation factor Ts YP_001433977.1 5124401 D 383372 CDS YP_001433978.1 156743849 5541433 5125170..5125901 1 NC_009767.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 5125901 pyrH 5541433 pyrH Roseiflexus castenholzii DSM 13941 uridylate kinase YP_001433978.1 5125170 D 383372 CDS YP_001433979.1 156743850 5541434 5125922..5126479 1 NC_009767.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 5126479 frr 5541434 frr Roseiflexus castenholzii DSM 13941 ribosome recycling factor YP_001433979.1 5125922 D 383372 CDS YP_001433980.1 156743851 5541435 5126602..5127312 1 NC_009767.1 KEGG: rrs:RoseRS_2015 UDP diphosphate synthase; TIGRFAM: UDP diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; UDP diphosphate synthase 5127312 5541435 Rcas_3929 Roseiflexus castenholzii DSM 13941 UDP diphosphate synthase YP_001433980.1 5126602 D 383372 CDS YP_001433981.1 156743852 5541436 5127317..5128165 1 NC_009767.1 PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_2014 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 5128165 5541436 Rcas_3930 Roseiflexus castenholzii DSM 13941 phosphatidate cytidylyltransferase YP_001433981.1 5127317 D 383372 CDS YP_001433982.1 156743853 5541437 5128266..5129984 1 NC_009767.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rrs:RoseRS_2008 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 5129984 5541437 Rcas_3931 Roseiflexus castenholzii DSM 13941 single-stranded-DNA-specific exonuclease RecJ YP_001433982.1 5128266 D 383372 CDS YP_001433983.1 156743854 5541438 5129997..5131868 1 NC_009767.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase KEGG: rrs:RoseRS_2007 CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; hypothetical protein 5131868 5541438 Rcas_3932 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433983.1 5129997 D 383372 CDS YP_001433984.1 156743855 5541439 5131878..5132576 1 NC_009767.1 KEGG: rrs:RoseRS_2006 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 5132576 5541439 Rcas_3933 Roseiflexus castenholzii DSM 13941 DNA polymerase III subunit epsilon YP_001433984.1 5131878 D 383372 CDS YP_001433985.1 156743856 5541440 5132793..5134712 1 NC_009767.1 TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2004 acetate--CoA ligase; acetate--CoA ligase 5134712 5541440 Rcas_3934 Roseiflexus castenholzii DSM 13941 acetate--CoA ligase YP_001433985.1 5132793 D 383372 CDS YP_001433986.1 156743857 5541441 5134760..5136712 1 NC_009767.1 TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2003 acetate--CoA ligase; acetate--CoA ligase 5136712 5541441 Rcas_3935 Roseiflexus castenholzii DSM 13941 acetate--CoA ligase YP_001433986.1 5134760 D 383372 CDS YP_001433987.1 156743858 5541442 complement(5136757..5137305) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2002 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5137305 5541442 Rcas_3936 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001433987.1 5136757 R 383372 CDS YP_001433988.1 156743859 5541443 5137386..5138171 1 NC_009767.1 KEGG: rrs:RoseRS_2001 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; ribonuclease PH 5138171 5541443 Rcas_3937 Roseiflexus castenholzii DSM 13941 ribonuclease PH YP_001433988.1 5137386 D 383372 CDS YP_001433989.1 156743860 5541444 complement(5138222..5140036) 1 NC_009767.1 KEGG: rrs:RoseRS_1096 hypothetical protein; hypothetical protein 5140036 5541444 Rcas_3938 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433989.1 5138222 R 383372 CDS YP_001433990.1 156743861 5541445 complement(5140937..5146210) 1 NC_009767.1 PFAM: alpha-2-macroglobulin domain protein; KEGG: rrs:RoseRS_1097 large extracellular alpha-helical protein-like protein; alpha-2-macroglobulin domain-containing protein 5146210 5541445 Rcas_3939 Roseiflexus castenholzii DSM 13941 alpha-2-macroglobulin domain-containing protein YP_001433990.1 5140937 R 383372 CDS YP_001433991.1 156743862 5541446 complement(5146292..5147500) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1098 glycosyl transferase, group 1; group 1 glycosyl transferase 5147500 5541446 Rcas_3940 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433991.1 5146292 R 383372 CDS YP_001433992.1 156743863 5541447 complement(5147502..5148215) 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1103 methyltransferase type 11; type 11 methyltransferase 5148215 5541447 Rcas_3941 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001433992.1 5147502 R 383372 CDS YP_001433993.1 156743864 5541448 complement(5148229..5149416) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1104 glycosyl transferase, group 1; group 1 glycosyl transferase 5149416 5541448 Rcas_3942 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001433993.1 5148229 R 383372 CDS YP_001433994.1 156743865 5541449 complement(5149413..5151518) 1 NC_009767.1 KEGG: rrs:RoseRS_1105 hypothetical protein; hypothetical protein 5151518 5541449 Rcas_3943 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433994.1 5149413 R 383372 CDS YP_001433995.1 156743866 5541450 complement(5151540..5152076) 1 NC_009767.1 PFAM: Dual specificity protein phosphatase; KEGG: rrs:RoseRS_1106 dual specificity protein phosphatase; dual specificity protein phosphatase 5152076 5541450 Rcas_3944 Roseiflexus castenholzii DSM 13941 dual specificity protein phosphatase YP_001433995.1 5151540 R 383372 CDS YP_001433996.1 156743867 5541451 5152230..5152508 1 NC_009767.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: rrs:RoseRS_1107 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 5152508 5541451 Rcas_3945 Roseiflexus castenholzii DSM 13941 AsnC family transcriptional regulator YP_001433996.1 5152230 D 383372 CDS YP_001433997.1 156743868 5541452 5152521..5152895 1 NC_009767.1 KEGG: rrs:RoseRS_1108 hypothetical protein; hypothetical protein 5152895 5541452 Rcas_3946 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433997.1 5152521 D 383372 CDS YP_001433998.1 156743869 5541453 complement(5152921..5153529) 1 NC_009767.1 KEGG: rrs:RoseRS_1109 hypothetical protein; hypothetical protein 5153529 5541453 Rcas_3947 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433998.1 5152921 R 383372 CDS YP_001433999.1 156743870 5541454 5153558..5154046 1 NC_009767.1 PFAM: protein of unknown function DUF355; KEGG: rrs:RoseRS_1110 protein of unknown function DUF355; hypothetical protein 5154046 5541454 Rcas_3948 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001433999.1 5153558 D 383372 CDS YP_001434000.1 156743871 5541455 5154091..5155542 1 NC_009767.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: rrs:RoseRS_1111 glutamyl-tRNA(Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) amidotransferase subunit B 5155542 5541455 Rcas_3949 Roseiflexus castenholzii DSM 13941 glutamyl-tRNA(Gln) amidotransferase subunit B YP_001434000.1 5154091 D 383372 CDS YP_001434001.1 156743872 5541456 5155646..5156839 1 NC_009767.1 PFAM: esterase; KEGG: rrs:RoseRS_1112 esterase; esterase 5156839 5541456 Rcas_3950 Roseiflexus castenholzii DSM 13941 esterase YP_001434001.1 5155646 D 383372 CDS YP_001434002.1 156743873 5541457 5156854..5157756 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1113 ABC transporter related; ABC transporter-like protein 5157756 5541457 Rcas_3951 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001434002.1 5156854 D 383372 CDS YP_001434003.1 156743874 5541458 5157756..5158628 1 NC_009767.1 KEGG: rrs:RoseRS_1114 hypothetical protein; hypothetical protein 5158628 5541458 Rcas_3952 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434003.1 5157756 D 383372 CDS YP_001434004.1 156743875 5541459 complement(5158641..5159486) 1 NC_009767.1 KEGG: rrs:RoseRS_1115 hypothetical protein; hypothetical protein 5159486 5541459 Rcas_3953 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434004.1 5158641 R 383372 CDS YP_001434005.1 156743876 5541460 complement(5159493..5160596) 1 NC_009767.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: rrs:RoseRS_1116 Na+/Ca+ antiporter, CaCA family; CaCA family Na(+)/Ca(+) antiporter 5160596 5541460 Rcas_3954 Roseiflexus castenholzii DSM 13941 CaCA family Na(+)/Ca(+) antiporter YP_001434005.1 5159493 R 383372 CDS YP_001434006.1 156743877 5541461 5160730..5162091 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_1117 signal transduction histidine kinase; signal transduction histidine kinase 5162091 5541461 Rcas_3955 Roseiflexus castenholzii DSM 13941 signal transduction histidine kinase YP_001434006.1 5160730 D 383372 CDS YP_001434007.1 156743878 5541462 5162136..5163848 1 NC_009767.1 PFAM: penicillin-binding protein transpeptidase; KEGG: rrs:RoseRS_1118 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 5163848 5541462 Rcas_3956 Roseiflexus castenholzii DSM 13941 peptidoglycan glycosyltransferase YP_001434007.1 5162136 D 383372 CDS YP_001434008.1 156743879 5541463 5163901..5165274 1 NC_009767.1 PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: rrs:RoseRS_1119 peptidase S41; peptidase S41 5165274 5541463 Rcas_3957 Roseiflexus castenholzii DSM 13941 peptidase S41 YP_001434008.1 5163901 D 383372 CDS YP_001434009.1 156743880 5541464 5165274..5165864 1 NC_009767.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 5165864 hisB 5541464 hisB Roseiflexus castenholzii DSM 13941 imidazoleglycerol-phosphate dehydratase YP_001434009.1 5165274 D 383372 CDS YP_001434010.1 156743881 5541465 5165861..5166889 1 NC_009767.1 PFAM: luciferase family protein; KEGG: rrs:RoseRS_1121 luciferase family protein; luciferase family protein 5166889 5541465 Rcas_3959 Roseiflexus castenholzii DSM 13941 luciferase family protein YP_001434010.1 5165861 D 383372 CDS YP_001434011.1 156743882 5541466 5166899..5167213 1 NC_009767.1 PFAM: DNA polymerase beta domain protein region; KEGG: gme:Gmet_0479 DNA polymerase, beta-like region; DNA polymerase subunit beta 5167213 5541466 Rcas_3960 Roseiflexus castenholzii DSM 13941 DNA polymerase subunit beta YP_001434011.1 5166899 D 383372 CDS YP_001434012.1 156743883 5541467 5167200..5167541 1 NC_009767.1 PFAM: protein of unknown function DUF86; KEGG: syf:Synpcc7942_0032 hypothetical protein; hypothetical protein 5167541 5541467 Rcas_3961 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434012.1 5167200 D 383372 CDS YP_001434013.1 156743884 5541468 5167561..5168766 1 NC_009767.1 KEGG: rrs:RoseRS_1122 laminin G; laminin G 5168766 5541468 Rcas_3962 Roseiflexus castenholzii DSM 13941 laminin G YP_001434013.1 5167561 D 383372 CDS YP_001434014.1 156743885 5541469 5168856..5169785 1 NC_009767.1 KEGG: rrs:RoseRS_1123 LamG domain protein jellyroll fold domain protein; LamG domain-containing protein 5169785 5541469 Rcas_3963 Roseiflexus castenholzii DSM 13941 LamG domain-containing protein YP_001434014.1 5168856 D 383372 CDS YP_001434015.1 156743886 5541470 5169785..5170879 1 NC_009767.1 KEGG: rrs:RoseRS_1124 LamG domain protein jellyroll fold domain protein; LamG domain-containing protein 5170879 5541470 Rcas_3964 Roseiflexus castenholzii DSM 13941 LamG domain-containing protein YP_001434015.1 5169785 D 383372 CDS YP_001434016.1 156743887 5541471 5171089..5171412 1 NC_009767.1 KEGG: rrs:RoseRS_1125 hypothetical protein; hypothetical protein 5171412 5541471 Rcas_3965 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434016.1 5171089 D 383372 CDS YP_001434017.1 156743888 5541472 5171424..5172131 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_1126 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5172131 5541472 Rcas_3966 Roseiflexus castenholzii DSM 13941 short-chain dehydrogenase/reductase SDR YP_001434017.1 5171424 D 383372 CDS YP_001434018.1 156743889 5541473 5172161..5173504 1 NC_009767.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_1127 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 5173504 5541473 Rcas_3967 Roseiflexus castenholzii DSM 13941 AMP-dependent synthetase/ligase YP_001434018.1 5172161 D 383372 CDS YP_001434019.1 156743890 5541474 5173506..5175011 1 NC_009767.1 KEGG: rrs:RoseRS_1128 hypothetical protein; hypothetical protein 5175011 5541474 Rcas_3968 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434019.1 5173506 D 383372 CDS YP_001434020.1 156743891 5541475 5175011..5176030 1 NC_009767.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_1129 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 5176030 5541475 Rcas_3969 Roseiflexus castenholzii DSM 13941 hexapaptide repeat-containing transferase YP_001434020.1 5175011 D 383372 CDS YP_001434021.1 156743892 5541476 5176182..5176940 1 NC_009767.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1130 glycosyl transferase, family 2; glycosyl transferase family protein 5176940 5541476 Rcas_3970 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001434021.1 5176182 D 383372 CDS YP_001434022.1 156743893 5541477 5176937..5178022 1 NC_009767.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rrs:RoseRS_1131 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 5178022 5541477 Rcas_3971 Roseiflexus castenholzii DSM 13941 UDP-N-acetylglucosamine 2-epimerase YP_001434022.1 5176937 D 383372 CDS YP_001434023.1 156743894 5541478 5178263..5178640 1 NC_009767.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_1132 protein of unknown function DUF6, transmembrane; hypothetical protein 5178640 5541478 Rcas_3972 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434023.1 5178263 D 383372 CDS YP_001434024.1 156743895 5541479 5178822..5180174 1 NC_009767.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_1133 FAD dependent oxidoreductase; hypothetical protein 5180174 5541479 Rcas_3973 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434024.1 5178822 D 383372 CDS YP_001434025.1 156743896 5541480 5180220..5181686 1 NC_009767.1 PFAM: sugar transferase; KEGG: rrs:RoseRS_1134 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase 5181686 5541480 Rcas_3974 Roseiflexus castenholzii DSM 13941 UDP-phosphate galactose phosphotransferase YP_001434025.1 5180220 D 383372 CDS YP_001434026.1 156743897 5541481 5181702..5182787 1 NC_009767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_1135 oxidoreductase domain protein; oxidoreductase domain-containing protein 5182787 5541481 Rcas_3975 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001434026.1 5181702 D 383372 CDS YP_001434027.1 156743898 5541482 5182827..5183117 1 NC_009767.1 hypothetical protein 5183117 5541482 Rcas_3976 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434027.1 5182827 D 383372 CDS YP_001434028.1 156743899 5541487 5188712..5189467 1 NC_009767.1 TIGRFAM: F420-dependent oxidoreductase, PFAM: protein of unknown function DUF129; KEGG: rrs:RoseRS_1136 F420-dependent oxidoreductase; F420-dependent oxidoreductase 5189467 5541487 Rcas_3977 Roseiflexus castenholzii DSM 13941 F420-dependent oxidoreductase YP_001434028.1 5188712 D 383372 CDS YP_001434029.1 156743900 5541488 5189505..5190134 1 NC_009767.1 PFAM: nitroreductase; KEGG: rrs:RoseRS_1137 nitroreductase; nitroreductase 5190134 5541488 Rcas_3978 Roseiflexus castenholzii DSM 13941 nitroreductase YP_001434029.1 5189505 D 383372 CDS YP_001434030.1 156743901 5541489 5190153..5191097 1 NC_009767.1 catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); LPPG:FO 2-phospho-L-lactate transferase 5191097 5541489 Rcas_3979 Roseiflexus castenholzii DSM 13941 LPPG:FO 2-phospho-L-lactate transferase YP_001434030.1 5190153 D 383372 CDS YP_001434031.1 156743902 5541490 5191344..5191976 1 NC_009767.1 PFAM: protein of unknown function DUF121; KEGG: rrs:RoseRS_1139 protein of unknown function DUF121; hypothetical protein 5191976 5541490 Rcas_3980 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434031.1 5191344 D 383372 CDS YP_001434032.1 156743903 5541491 5191970..5192959 1 NC_009767.1 PFAM: luciferase family protein; KEGG: rrs:RoseRS_1140 luciferase family protein; luciferase family protein 5192959 5541491 Rcas_3981 Roseiflexus castenholzii DSM 13941 luciferase family protein YP_001434032.1 5191970 D 383372 CDS YP_001434033.1 156743904 5541492 5192971..5193387 1 NC_009767.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_1141 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 5193387 5541492 Rcas_3982 Roseiflexus castenholzii DSM 13941 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001434033.1 5192971 D 383372 CDS YP_001434034.1 156743905 5541493 complement(5193882..5196200) 1 NC_009767.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rrs:RoseRS_1142 xanthine dehydrogenase; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 5196200 5541493 Rcas_3983 Roseiflexus castenholzii DSM 13941 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001434034.1 5193882 R 383372 CDS YP_001434035.1 156743906 5541494 complement(5196213..5196509) 1 NC_009767.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: rrs:RoseRS_1143 glutamyl-tRNA(Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 5196509 5541494 Rcas_3984 Roseiflexus castenholzii DSM 13941 glutamyl-tRNA(Gln) amidotransferase subunit C YP_001434035.1 5196213 R 383372 CDS YP_001434036.1 156743907 5541495 complement(5196530..5197885) 1 NC_009767.1 PFAM: YbbR family protein; KEGG: rrs:RoseRS_1144 YbbR family protein; YbbR family protein 5197885 5541495 Rcas_3985 Roseiflexus castenholzii DSM 13941 YbbR family protein YP_001434036.1 5196530 R 383372 CDS YP_001434037.1 156743908 5541496 complement(5197904..5198788) 1 NC_009767.1 PFAM: protein of unknown function DUF147; KEGG: rrs:RoseRS_1145 protein of unknown function DUF147; hypothetical protein 5198788 5541496 Rcas_3986 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434037.1 5197904 R 383372 CDS YP_001434038.1 156743909 5541497 complement(5198892..5202170) 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1146 tetratricopeptide TPR_2 repeat protein; hypothetical protein 5202170 5541497 Rcas_3987 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434038.1 5198892 R 383372 CDS YP_001434039.1 156743910 5541498 complement(5202317..5203108) 1 NC_009767.1 PFAM: IstB domain protein ATP-binding protein; Chromosomal replication initiator DnaA; SMART: AAA ATPase; KEGG: rrs:RoseRS_1147 IstB domain protein ATP-binding protein; IstB ATP binding domain-containing protein 5203108 5541498 Rcas_3988 Roseiflexus castenholzii DSM 13941 IstB ATP binding domain-containing protein YP_001434039.1 5202317 R 383372 CDS YP_001434040.1 156743911 5541499 complement(5203035..5203754) 1 NC_009767.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: rrs:RoseRS_1148 primosome, DnaD subunit; primosome subunit DnaD 5203754 5541499 Rcas_3989 Roseiflexus castenholzii DSM 13941 primosome subunit DnaD YP_001434040.1 5203035 R 383372 CDS YP_001434041.1 156743912 5541500 complement(5204025..5205359) 1 NC_009767.1 KEGG: rrs:RoseRS_1149 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 5205359 5541500 Rcas_3990 Roseiflexus castenholzii DSM 13941 replicative DNA helicase YP_001434041.1 5204025 R 383372 CDS YP_001434042.1 156743913 5541501 complement(5205569..5206066) 1 NC_009767.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 5206066 rplI 5541501 rplI Roseiflexus castenholzii DSM 13941 50S ribosomal protein L9 YP_001434042.1 5205569 R 383372 CDS YP_001434043.1 156743914 5541502 complement(5206185..5206847) 1 NC_009767.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_1151 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 5206847 5541502 Rcas_3992 Roseiflexus castenholzii DSM 13941 HAD family hydrolase YP_001434043.1 5206185 R 383372 CDS YP_001434044.1 156743915 5541503 complement(5206997..5207962) 1 NC_009767.1 PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_1152 beta-lactamase domain protein; beta-lactamase domain-containing protein 5207962 5541503 Rcas_3993 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001434044.1 5206997 R 383372 CDS YP_001434045.1 156743916 5541504 5208004..5208777 1 NC_009767.1 PFAM: inositol monophosphatase; KEGG: rrs:RoseRS_1153 inositol-phosphate phosphatase; inositol monophosphatase 5208777 5541504 Rcas_3994 Roseiflexus castenholzii DSM 13941 inositol monophosphatase YP_001434045.1 5208004 D 383372 CDS YP_001434046.1 156743917 5541505 complement(5208921..5209319) 1 NC_009767.1 PFAM: ribosomal protein S9; KEGG: rrs:RoseRS_1154 ribosomal protein S9; 30S ribosomal protein S9 5209319 5541505 Rcas_3995 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S9 YP_001434046.1 5208921 R 383372 CDS YP_001434047.1 156743918 5541506 complement(5209340..5209780) 1 NC_009767.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 5209780 rplM 5541506 rplM Roseiflexus castenholzii DSM 13941 50S ribosomal protein L13 YP_001434047.1 5209340 R 383372 CDS YP_001434048.1 156743919 5541507 complement(5209777..5210589) 1 NC_009767.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase ACD 5210589 5541507 Rcas_3997 Roseiflexus castenholzii DSM 13941 tRNA pseudouridine synthase ACD YP_001434048.1 5209777 R 383372 CDS YP_001434049.1 156743920 5541508 complement(5210589..5210939) 1 NC_009767.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 5210939 rplQ 5541508 rplQ Roseiflexus castenholzii DSM 13941 50S ribosomal protein L17 YP_001434049.1 5210589 R 383372 CDS YP_001434050.1 156743921 5541509 complement(5210954..5211925) 1 NC_009767.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 5211925 5541509 Rcas_3999 Roseiflexus castenholzii DSM 13941 DNA-directed RNA polymerase subunit alpha YP_001434050.1 5210954 R 383372 CDS YP_001434051.1 156743922 5541510 complement(5212020..5212640) 1 NC_009767.1 PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: rrs:RoseRS_1159 ribosomal protein S4; 30S ribosomal protein S4 5212640 5541510 Rcas_4000 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S4 YP_001434051.1 5212020 R 383372 CDS YP_001434052.1 156743923 5541511 complement(5212661..5213077) 1 NC_009767.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 5213077 5541511 Rcas_4001 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S11 YP_001434052.1 5212661 R 383372 CDS YP_001434053.1 156743924 5541512 complement(5213143..5213526) 1 NC_009767.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 5213526 rpsM 5541512 rpsM Roseiflexus castenholzii DSM 13941 30S ribosomal protein S13 YP_001434053.1 5213143 R 383372 CDS YP_001434054.1 156743925 5541513 complement(5213618..5213734) 1 NC_009767.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 5213734 rpmJ 5541513 rpmJ Roseiflexus castenholzii DSM 13941 50S ribosomal protein L36 YP_001434054.1 5213618 R 383372 CDS YP_001434055.1 156743926 5541514 complement(5213843..5214064) 1 NC_009767.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 5214064 infA 5541514 infA Roseiflexus castenholzii DSM 13941 translation initiation factor IF-1 YP_001434055.1 5213843 R 383372 CDS YP_001434056.1 156743927 5541515 complement(5214081..5214761) 1 NC_009767.1 PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: rrs:RoseRS_1164 nucleoside-triphosphate--adenylate kinase; nucleoside-triphosphate--adenylate kinase 5214761 5541515 Rcas_4005 Roseiflexus castenholzii DSM 13941 nucleoside-triphosphate--adenylate kinase YP_001434056.1 5214081 R 383372 CDS YP_001434057.1 156743928 5541516 complement(5214797..5216149) 1 NC_009767.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: rrs:RoseRS_1165 preprotein translocase, SecY subunit; preprotein translocase subunit SecY 5216149 5541516 Rcas_4006 Roseiflexus castenholzii DSM 13941 preprotein translocase subunit SecY YP_001434057.1 5214797 R 383372 CDS YP_001434058.1 156743929 5541517 complement(5216196..5216720) 1 NC_009767.1 late assembly protein; 50S ribosomal protein L15 5216720 rplO 5541517 rplO Roseiflexus castenholzii DSM 13941 50S ribosomal protein L15 YP_001434058.1 5216196 R 383372 CDS YP_001434059.1 156743930 5541518 complement(5216786..5217013) 1 NC_009767.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 5217013 rpmD 5541518 rpmD Roseiflexus castenholzii DSM 13941 50S ribosomal protein L30 YP_001434059.1 5216786 R 383372 CDS YP_001434060.1 156743931 5541519 complement(5217017..5217559) 1 NC_009767.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 5217559 rpsE 5541519 rpsE Roseiflexus castenholzii DSM 13941 30S ribosomal protein S5 YP_001434060.1 5217017 R 383372 CDS YP_001434061.1 156743932 5541520 complement(5217658..5218023) 1 NC_009767.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 5218023 rplR 5541520 rplR Roseiflexus castenholzii DSM 13941 50S ribosomal protein L18 YP_001434061.1 5217658 R 383372 CDS YP_001434062.1 156743933 5541521 complement(5218095..5218658) 1 NC_009767.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 5218658 rplF 5541521 rplF Roseiflexus castenholzii DSM 13941 50S ribosomal protein L6 YP_001434062.1 5218095 R 383372 CDS YP_001434063.1 156743934 5541522 complement(5218679..5219077) 1 NC_009767.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 5219077 rpsH 5541522 rpsH Roseiflexus castenholzii DSM 13941 30S ribosomal protein S8 YP_001434063.1 5218679 R 383372 CDS YP_001434064.1 156743935 5541523 complement(5219132..5219317) 1 NC_009767.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 5219317 rpsN 5541523 rpsN Roseiflexus castenholzii DSM 13941 30S ribosomal protein S14 YP_001434064.1 5219132 R 383372 CDS YP_001434065.1 156743936 5541524 complement(5219383..5219925) 1 NC_009767.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 5219925 rplE 5541524 rplE Roseiflexus castenholzii DSM 13941 50S ribosomal protein L5 YP_001434065.1 5219383 R 383372 CDS YP_001434066.1 156743937 5541525 complement(5219976..5220308) 1 NC_009767.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 5220308 rplX 5541525 rplX Roseiflexus castenholzii DSM 13941 50S ribosomal protein L24 YP_001434066.1 5219976 R 383372 CDS YP_001434067.1 156743938 5541526 complement(5220329..5220697) 1 NC_009767.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 5220697 rplN 5541526 rplN Roseiflexus castenholzii DSM 13941 50S ribosomal protein L14 YP_001434067.1 5220329 R 383372 CDS YP_001434068.1 156743939 5541527 complement(5220700..5220960) 1 NC_009767.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 5220960 rpsQ 5541527 rpsQ Roseiflexus castenholzii DSM 13941 30S ribosomal protein S17 YP_001434068.1 5220700 R 383372 CDS YP_001434069.1 156743940 5541528 complement(5220972..5221172) 1 NC_009767.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 5221172 5541528 Rcas_4018 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L29 YP_001434069.1 5220972 R 383372 CDS YP_001434070.1 156743941 5541529 complement(5221169..5221594) 1 NC_009767.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 5221594 rplP 5541529 rplP Roseiflexus castenholzii DSM 13941 50S ribosomal protein L16 YP_001434070.1 5221169 R 383372 CDS YP_001434071.1 156743942 5541530 complement(5221609..5222391) 1 NC_009767.1 KEGG: rrs:RoseRS_1179 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 5222391 5541530 Rcas_4020 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S3 YP_001434071.1 5221609 R 383372 CDS YP_001434072.1 156743943 5541531 complement(5222437..5222778) 1 NC_009767.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 5222778 rplV 5541531 rplV Roseiflexus castenholzii DSM 13941 50S ribosomal protein L22 YP_001434072.1 5222437 R 383372 CDS YP_001434073.1 156743944 5541532 complement(5222811..5223098) 1 NC_009767.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 5223098 rpsS 5541532 rpsS Roseiflexus castenholzii DSM 13941 30S ribosomal protein S19 YP_001434073.1 5222811 R 383372 CDS YP_001434074.1 156743945 5541533 complement(5223123..5223950) 1 NC_009767.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 5223950 rplB 5541533 rplB Roseiflexus castenholzii DSM 13941 50S ribosomal protein L2 YP_001434074.1 5223123 R 383372 CDS YP_001434075.1 156743946 5541534 complement(5223954..5224238) 1 NC_009767.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 5224238 rplW 5541534 rplW Roseiflexus castenholzii DSM 13941 50S ribosomal protein L23 YP_001434075.1 5223954 R 383372 CDS YP_001434076.1 156743947 5541535 complement(5224238..5224903) 1 NC_009767.1 PFAM: ribosomal protein L4/L1e; KEGG: rrs:RoseRS_1184 ribosomal protein L4/L1e; 50S ribosomal protein L4 5224903 5541535 Rcas_4025 Roseiflexus castenholzii DSM 13941 50S ribosomal protein L4 YP_001434076.1 5224238 R 383372 CDS YP_001434077.1 156743948 5541536 complement(5224956..5225588) 1 NC_009767.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 5225588 rplC 5541536 rplC Roseiflexus castenholzii DSM 13941 50S ribosomal protein L3 YP_001434077.1 5224956 R 383372 CDS YP_001434078.1 156743949 5541537 complement(5225648..5225956) 1 NC_009767.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 5225956 rpsJ 5541537 rpsJ Roseiflexus castenholzii DSM 13941 30S ribosomal protein S10 YP_001434078.1 5225648 R 383372 CDS YP_001434079.1 156743950 5541538 complement(5226052..5227257) 1 NC_009767.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 5227257 5541538 Rcas_4028 Roseiflexus castenholzii DSM 13941 elongation factor Tu YP_001434079.1 5226052 R 383372 CDS YP_001434080.1 156743951 5541539 complement(5227316..5229421) 1 NC_009767.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 5229421 5541539 Rcas_4029 Roseiflexus castenholzii DSM 13941 elongation factor G YP_001434080.1 5227316 R 383372 CDS YP_001434081.1 156743952 5541540 complement(5229517..5229990) 1 NC_009767.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 5229990 5541540 Rcas_4030 Roseiflexus castenholzii DSM 13941 30S ribosomal protein S7 YP_001434081.1 5229517 R 383372 CDS YP_001434082.1 156743953 5541541 complement(5230049..5230483) 1 NC_009767.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 5230483 rpsL 5541541 rpsL Roseiflexus castenholzii DSM 13941 30S ribosomal protein S12 YP_001434082.1 5230049 R 383372 CDS YP_001434083.1 156743954 5541542 5230790..5231704 1 NC_009767.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_1191 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5231704 5541542 Rcas_4032 Roseiflexus castenholzii DSM 13941 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001434083.1 5230790 D 383372 CDS YP_001434084.1 156743955 5541543 5231849..5232325 1 NC_009767.1 KEGG: rrs:RoseRS_1192 hypothetical protein; hypothetical protein 5232325 5541543 Rcas_4033 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434084.1 5231849 D 383372 CDS YP_001434085.1 156743956 5541545 5235124..5235447 1 NC_009767.1 hypothetical protein 5235447 5541545 Rcas_4034 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434085.1 5235124 D 383372 CDS YP_001434086.1 156743957 5541546 5235462..5236538 1 NC_009767.1 KEGG: rrs:RoseRS_1193 hypothetical protein; hypothetical protein 5236538 5541546 Rcas_4035 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434086.1 5235462 D 383372 CDS YP_001434087.1 156743958 5541547 complement(5236544..5237146) 1 NC_009767.1 KEGG: pas:Pars_2160 hypothetical protein; hypothetical protein 5237146 5541547 Rcas_4036 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434087.1 5236544 R 383372 CDS YP_001434088.1 156743959 5541548 complement(5237197..5238051) 1 NC_009767.1 KEGG: ngo:NGO0874 type II DNA restriction endonuclease R.NGOI; type II site-specific deoxyribonuclease 5238051 5541548 Rcas_4037 Roseiflexus castenholzii DSM 13941 type II site-specific deoxyribonuclease YP_001434088.1 5237197 R 383372 CDS YP_001434089.1 156743960 5541549 complement(5238059..5239510) 1 NC_009767.1 PFAM: RNA methylase; KEGG: rrs:RoseRS_2251 hypothetical protein; RNA methylase 5239510 5541549 Rcas_4038 Roseiflexus castenholzii DSM 13941 RNA methylase YP_001434089.1 5238059 R 383372 CDS YP_001434090.1 156743961 5541550 complement(5239745..5239957) 1 NC_009767.1 KEGG: rrs:RoseRS_1197 hypothetical protein; hypothetical protein 5239957 5541550 Rcas_4039 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434090.1 5239745 R 383372 CDS YP_001434091.1 156743962 5541551 complement(5240325..5241752) 1 NC_009767.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: rrs:RoseRS_1198 nitrogenase; nitrogenase 5241752 5541551 Rcas_4040 Roseiflexus castenholzii DSM 13941 nitrogenase YP_001434091.1 5240325 R 383372 CDS YP_001434092.1 156743963 5541552 complement(5241749..5243179) 1 NC_009767.1 KEGG: rrs:RoseRS_1199 nitrogenase component I, alpha chain; TIGRFAM: nitrogenase alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase component I subunit alpha 5243179 5541552 Rcas_4041 Roseiflexus castenholzii DSM 13941 nitrogenase component I subunit alpha YP_001434092.1 5241749 R 383372 CDS YP_001434093.1 156743964 5541553 complement(5243148..5244089) 1 NC_009767.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_1200 radical SAM domain protein; radical SAM domain-containing protein 5244089 5541553 Rcas_4042 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001434093.1 5243148 R 383372 CDS YP_001434094.1 156743965 5541554 complement(5244117..5244938) 1 NC_009767.1 KEGG: rrs:RoseRS_1201 nitrogenase iron protein; TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein 5244938 5541554 Rcas_4043 Roseiflexus castenholzii DSM 13941 nitrogenase iron protein YP_001434094.1 5244117 R 383372 CDS YP_001434095.1 156743966 5541555 5245820..5246725 1 NC_009767.1 KEGG: rrs:RoseRS_1202 hypothetical protein; hypothetical protein 5246725 5541555 Rcas_4044 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434095.1 5245820 D 383372 CDS YP_001434096.1 156743967 5541556 5246738..5249644 1 NC_009767.1 PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_1203 protein of unknown function DUF214; hypothetical protein 5249644 5541556 Rcas_4045 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434096.1 5246738 D 383372 CDS YP_001434097.1 156743968 5541557 5249730..5250293 1 NC_009767.1 KEGG: ddi:DDBDRAFT_0187057 hypothetical protein; hypothetical protein 5250293 5541557 Rcas_4046 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434097.1 5249730 D 383372 CDS YP_001434098.1 156743969 5541558 5250349..5252997 1 NC_009767.1 KEGG: rrs:RoseRS_1205 hypothetical protein; hypothetical protein 5252997 5541558 Rcas_4047 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434098.1 5250349 D 383372 CDS YP_001434099.1 156743970 5541559 5253533..5253904 1 NC_009767.1 KEGG: rrs:RoseRS_1413 protein of unknown function DUF820; hypothetical protein 5253904 5541559 Rcas_4048 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434099.1 5253533 D 383372 CDS YP_001434100.1 156743971 5541560 complement(5253999..5254508) 1 NC_009767.1 KEGG: rrs:RoseRS_2848 hypothetical protein; hypothetical protein 5254508 5541560 Rcas_4049 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434100.1 5253999 R 383372 CDS YP_001434101.1 156743972 5541561 5254696..5255523 1 NC_009767.1 PFAM: cyclase family protein; KEGG: rrs:RoseRS_1211 cyclase family protein; cyclase family protein 5255523 5541561 Rcas_4050 Roseiflexus castenholzii DSM 13941 cyclase family protein YP_001434101.1 5254696 D 383372 CDS YP_001434102.1 156743973 5541562 complement(5255528..5255938) 1 NC_009767.1 KEGG: rrs:RoseRS_1212 hypothetical protein; hypothetical protein 5255938 5541562 Rcas_4051 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434102.1 5255528 R 383372 CDS YP_001434103.1 156743974 5541563 5256431..5260009 1 NC_009767.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rrs:RoseRS_1213 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 5260009 5541563 Rcas_4052 Roseiflexus castenholzii DSM 13941 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001434103.1 5256431 D 383372 CDS YP_001434104.1 156743975 5541565 5260684..5261997 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2242 major facilitator superfamily MFS_1; major facilitator transporter 5261997 5541565 Rcas_4054 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001434104.1 5260684 D 383372 CDS YP_001434105.1 156743976 5541566 5262300..5263751 1 NC_009767.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rrs:RoseRS_2243 MATE efflux family protein; MATE efflux family protein 5263751 5541566 Rcas_4055 Roseiflexus castenholzii DSM 13941 MATE efflux family protein YP_001434105.1 5262300 D 383372 CDS YP_001434106.1 156743977 5541567 5265333..5266073 1 NC_009767.1 KEGG: rrs:RoseRS_2244 hypothetical protein; hypothetical protein 5266073 5541567 Rcas_4056 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434106.1 5265333 D 383372 CDS YP_001434107.1 156743978 5541568 5266468..5266797 1 NC_009767.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: rrs:RoseRS_2245 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 5266797 5541568 Rcas_4057 Roseiflexus castenholzii DSM 13941 ATP-dependent Clp protease adaptor protein ClpS YP_001434107.1 5266468 D 383372 CDS YP_001434108.1 156743979 5541569 complement(5266803..5267873) 1 NC_009767.1 KEGG: rrs:RoseRS_2246 virion core protein (lumpy skin disease virus)-like protein; virion core protein (lumpy skin disease virus)-like protein 5267873 5541569 Rcas_4058 Roseiflexus castenholzii DSM 13941 virion core protein (lumpy skin disease virus)-like protein YP_001434108.1 5266803 R 383372 CDS YP_001434109.1 156743980 5541570 complement(5268171..5268980) 1 NC_009767.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: rrs:RoseRS_2247 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase 5268980 5541570 Rcas_4059 Roseiflexus castenholzii DSM 13941 aspartate/glutamate/uridylate kinase YP_001434109.1 5268171 R 383372 CDS YP_001434110.1 156743981 5541571 complement(5269613..5270596) 1 NC_009767.1 PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_2248 UbiA prenyltransferase; UbiA prenyltransferase 5270596 5541571 Rcas_4060 Roseiflexus castenholzii DSM 13941 UbiA prenyltransferase YP_001434110.1 5269613 R 383372 CDS YP_001434111.1 156743982 5541572 5270727..5271341 1 NC_009767.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: rrs:RoseRS_2249 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 5271341 5541572 Rcas_4061 Roseiflexus castenholzii DSM 13941 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_001434111.1 5270727 D 383372 CDS YP_001434112.1 156743983 5541573 5271338..5272999 1 NC_009767.1 KEGG: rrs:RoseRS_2250 hypothetical protein; hypothetical protein 5272999 5541573 Rcas_4062 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434112.1 5271338 D 383372 CDS YP_001434113.1 156743984 5541574 complement(5273055..5275148) 1 NC_009767.1 PFAM: UvrD/REP helicase; KEGG: rrs:RoseRS_2259 UvrD/REP helicase; UvrD/REP helicase 5275148 5541574 Rcas_4063 Roseiflexus castenholzii DSM 13941 UvrD/REP helicase YP_001434113.1 5273055 R 383372 CDS YP_001434114.1 156743985 5541575 5275284..5276120 1 NC_009767.1 PFAM: transposase IS4 family protein; KEGG: pcu:pc1688 hypothetical protein; transposase IS4 family protein 5276120 5541575 Rcas_4064 Roseiflexus castenholzii DSM 13941 transposase IS4 family protein YP_001434114.1 5275284 D 383372 CDS YP_001434115.1 156743986 5541576 5276151..5277038 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0603 methyltransferase type 11; type 11 methyltransferase 5277038 5541576 Rcas_4065 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001434115.1 5276151 D 383372 CDS YP_001434116.1 156743987 5541577 5277082..5279229 1 NC_009767.1 KEGG: rrs:RoseRS_1838 hypothetical protein; hypothetical protein 5279229 5541577 Rcas_4066 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434116.1 5277082 D 383372 CDS YP_001434117.1 156743988 5541578 5279387..5280676 1 NC_009767.1 KEGG: rrs:RoseRS_0604 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 5280676 5541578 Rcas_4067 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001434117.1 5279387 D 383372 CDS YP_001434118.1 156743989 5541579 complement(5280673..5281971) 1 NC_009767.1 KEGG: rrs:RoseRS_0605 hypothetical protein; hypothetical protein 5281971 5541579 Rcas_4068 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434118.1 5280673 R 383372 CDS YP_001434119.1 156743990 5541580 complement(5282028..5283299) 1 NC_009767.1 KEGG: rrs:RoseRS_0582 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 5283299 5541580 Rcas_4069 Roseiflexus castenholzii DSM 13941 carboxyl-terminal protease YP_001434119.1 5282028 R 383372 CDS YP_001434120.1 156743991 5541581 5283825..5284451 1 NC_009767.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 5284451 upp 5541581 upp Roseiflexus castenholzii DSM 13941 uracil phosphoribosyltransferase YP_001434120.1 5283825 D 383372 CDS YP_001434121.1 156743992 5541582 5284590..5285717 1 NC_009767.1 PFAM: glycosyl transferase family 4; KEGG: rrs:RoseRS_0580 glycosyl transferase, family 4; glycosyl transferase family protein 5285717 5541582 Rcas_4071 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001434121.1 5284590 D 383372 CDS YP_001434122.1 156743993 5541583 complement(5285726..5286277) 1 NC_009767.1 PFAM: PEBP family protein; KEGG: rrs:RoseRS_0579 PEBP family protein; PEBP family protein 5286277 5541583 Rcas_4072 Roseiflexus castenholzii DSM 13941 PEBP family protein YP_001434122.1 5285726 R 383372 CDS YP_001434123.1 156743994 5541584 complement(5286524..5287732) 1 NC_009767.1 KEGG: ade:Adeh_2376 SAM-dependent methyltransferase; SAM-dependent methyltransferase 5287732 5541584 Rcas_4073 Roseiflexus castenholzii DSM 13941 SAM-dependent methyltransferase YP_001434123.1 5286524 R 383372 CDS YP_001434124.1 156743995 5541585 5288163..5288354 1 NC_009767.1 KEGG: rrs:RoseRS_0871 hypothetical protein; hypothetical protein 5288354 5541585 Rcas_4074 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434124.1 5288163 D 383372 CDS YP_001434125.1 156743996 5541586 5288382..5288825 1 NC_009767.1 KEGG: rrs:RoseRS_0872 hypothetical protein; hypothetical protein 5288825 5541586 Rcas_4075 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434125.1 5288382 D 383372 CDS YP_001434126.1 156743997 5541587 5288844..5289482 1 NC_009767.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rrs:RoseRS_0873 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein 5289482 5541587 Rcas_4076 Roseiflexus castenholzii DSM 13941 phage SPO1 DNA polymerase-like protein YP_001434126.1 5288844 D 383372 CDS YP_001434127.1 156743998 5541588 5289489..5290064 1 NC_009767.1 KEGG: rrs:RoseRS_0874 hypothetical protein; hypothetical protein 5290064 5541588 Rcas_4077 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434127.1 5289489 D 383372 CDS YP_001434128.1 156743999 5541589 5290185..5291870 1 NC_009767.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rrs:RoseRS_0875 beta-lactamase domain protein; beta-lactamase domain-containing protein 5291870 5541589 Rcas_4078 Roseiflexus castenholzii DSM 13941 beta-lactamase domain-containing protein YP_001434128.1 5290185 D 383372 CDS YP_001434129.1 156744000 5541590 complement(5292031..5292699) 1 NC_009767.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_0876 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 5292699 5541590 Rcas_4079 Roseiflexus castenholzii DSM 13941 ribosomal-protein-alanine acetyltransferase YP_001434129.1 5292031 R 383372 CDS YP_001434130.1 156744001 5541591 complement(5292714..5293532) 1 NC_009767.1 KEGG: rrs:RoseRS_0877 hypothetical protein; hypothetical protein 5293532 5541591 Rcas_4080 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434130.1 5292714 R 383372 CDS YP_001434131.1 156744002 5541592 5293727..5294371 1 NC_009767.1 KEGG: rrs:RoseRS_0878 hypothetical protein; hypothetical protein 5294371 5541592 Rcas_4081 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434131.1 5293727 D 383372 CDS YP_001434132.1 156744003 5541593 5294433..5295287 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: rrs:RoseRS_0879 alpha/beta hydrolase fold; alpha/beta hydrolase 5295287 5541593 Rcas_4082 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001434132.1 5294433 D 383372 CDS YP_001434133.1 156744004 5541594 5295450..5295677 1 NC_009767.1 TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: rrs:RoseRS_0880 regulatory protein, FmdB family; FmdB family regulatory protein 5295677 5541594 Rcas_4083 Roseiflexus castenholzii DSM 13941 FmdB family regulatory protein YP_001434133.1 5295450 D 383372 CDS YP_001434134.1 156744005 5541595 5295697..5296692 1 NC_009767.1 PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_0881 nucleotidyl transferase; nucleotidyl transferase 5296692 5541595 Rcas_4084 Roseiflexus castenholzii DSM 13941 nucleotidyl transferase YP_001434134.1 5295697 D 383372 CDS YP_001434135.1 156744006 5541596 5296712..5297845 1 NC_009767.1 KEGG: rrs:RoseRS_0882 hypothetical protein; hypothetical protein 5297845 5541596 Rcas_4085 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434135.1 5296712 D 383372 CDS YP_001434136.1 156744007 5541597 complement(5297790..5298878) 1 NC_009767.1 KEGG: rrs:RoseRS_0883 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; magnesium chelatase 5298878 5541597 Rcas_4086 Roseiflexus castenholzii DSM 13941 magnesium chelatase YP_001434136.1 5297790 R 383372 CDS YP_001434137.1 156744008 5541598 complement(5298887..5299171) 1 NC_009767.1 PFAM: protein of unknown function DUF503; KEGG: rrs:RoseRS_0884 protein of unknown function DUF503; hypothetical protein 5299171 5541598 Rcas_4087 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434137.1 5298887 R 383372 CDS YP_001434138.1 156744009 5541599 complement(5299190..5299891) 1 NC_009767.1 PFAM: peptidase S16 lon domain protein; KEGG: rrs:RoseRS_0885 peptidase S16, lon domain protein; peptidase S16 lon domain-containing protein 5299891 5541599 Rcas_4088 Roseiflexus castenholzii DSM 13941 peptidase S16 lon domain-containing protein YP_001434138.1 5299190 R 383372 CDS YP_001434139.1 156744010 5541600 complement(5299895..5301088) 1 NC_009767.1 KEGG: rrs:RoseRS_0886 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 5301088 5541600 Rcas_4089 Roseiflexus castenholzii DSM 13941 arginine biosynthesis bifunctional protein ArgJ YP_001434139.1 5299895 R 383372 CDS YP_001434140.1 156744011 5541601 complement(5301095..5302285) 1 NC_009767.1 SMART: PUA domain containing protein; KEGG: rrs:RoseRS_0887 PUA domain containing protein; PUA domain-containing protein 5302285 5541601 Rcas_4090 Roseiflexus castenholzii DSM 13941 PUA domain-containing protein YP_001434140.1 5301095 R 383372 CDS YP_001434141.1 156744012 5541602 complement(5302431..5303114) 1 NC_009767.1 PFAM: protein of unknown function DUF1498; KEGG: rrs:RoseRS_0888 protein of unknown function DUF1498; hypothetical protein 5303114 5541602 Rcas_4091 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434141.1 5302431 R 383372 CDS YP_001434142.1 156744013 5541603 complement(5303116..5303877) 1 NC_009767.1 PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_0904 protein of unknown function DUF323; hypothetical protein 5303877 5541603 Rcas_4092 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434142.1 5303116 R 383372 CDS YP_001434143.1 156744014 5541604 complement(5303902..5306970) 1 NC_009767.1 KEGG: rrs:RoseRS_0905 SMC domain protein; SMC domain-containing protein 5306970 5541604 Rcas_4093 Roseiflexus castenholzii DSM 13941 SMC domain-containing protein YP_001434143.1 5303902 R 383372 CDS YP_001434144.1 156744015 5541605 complement(5307035..5308204) 1 NC_009767.1 KEGG: rrs:RoseRS_0906 biotin carboxylase-like protein; biotin carboxylase-like protein 5308204 5541605 Rcas_4094 Roseiflexus castenholzii DSM 13941 biotin carboxylase-like protein YP_001434144.1 5307035 R 383372 CDS YP_001434145.1 156744016 5541606 complement(5309134..5310027) 1 NC_009767.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: cac:CAC3467 uncharacterized conserved protein, PhnB family; 3-demethylubiquinone-9 3-methyltransferase 5310027 5541606 Rcas_4095 Roseiflexus castenholzii DSM 13941 3-demethylubiquinone-9 3-methyltransferase YP_001434145.1 5309134 R 383372 CDS YP_001434146.1 156744017 5541607 5310218..5311468 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4478 major facilitator superfamily MFS_1; major facilitator transporter 5311468 5541607 Rcas_4096 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001434146.1 5310218 D 383372 CDS YP_001434147.1 156744018 5541608 complement(5311440..5311796) 1 NC_009767.1 KEGG: rrs:RoseRS_3287 hypothetical protein; hypothetical protein 5311796 5541608 Rcas_4097 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434147.1 5311440 R 383372 CDS YP_001434148.1 156744019 5541609 complement(5311811..5312173) 1 NC_009767.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3288 anti-sigma-factor antagonist; anti-sigma-factor antagonist 5312173 5541609 Rcas_4098 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001434148.1 5311811 R 383372 CDS YP_001434149.1 156744020 5541610 complement(5312279..5312722) 1 NC_009767.1 KEGG: rrs:RoseRS_3289 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 5312722 5541610 Rcas_4099 Roseiflexus castenholzii DSM 13941 anti-sigma regulatory factor YP_001434149.1 5312279 R 383372 CDS YP_001434150.1 156744021 5541611 complement(5312726..5313190) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_3290 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 5313190 5541611 Rcas_4100 Roseiflexus castenholzii DSM 13941 anti-sigma regulatory factor YP_001434150.1 5312726 R 383372 CDS YP_001434151.1 156744022 5541612 complement(5313444..5314958) 1 NC_009767.1 KEGG: rba:RB3053 hypothetical protein; hypothetical protein 5314958 5541612 Rcas_4101 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434151.1 5313444 R 383372 CDS YP_001434152.1 156744023 5541613 complement(5315577..5317127) 1 NC_009767.1 PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3291 carboxyl transferase; carboxyl transferase 5317127 5541613 Rcas_4102 Roseiflexus castenholzii DSM 13941 carboxyl transferase YP_001434152.1 5315577 R 383372 CDS YP_001434153.1 156744024 5541614 5317294..5317635 1 NC_009767.1 KEGG: rrs:RoseRS_3292 hypothetical protein; hypothetical protein 5317635 5541614 Rcas_4103 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434153.1 5317294 D 383372 CDS YP_001434154.1 156744025 5541615 complement(5317643..5318155) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_3293 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5318155 5541615 Rcas_4104 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001434154.1 5317643 R 383372 CDS YP_001434155.1 156744026 5541616 5318260..5318589 1 NC_009767.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rrs:RoseRS_3294 thioredoxin; thioredoxin 5318589 5541616 Rcas_4105 Roseiflexus castenholzii DSM 13941 thioredoxin YP_001434155.1 5318260 D 383372 CDS YP_001434156.1 156744027 5541617 5318608..5318892 1 NC_009767.1 PFAM: protein of unknown function DUF156; KEGG: rrs:RoseRS_3295 protein of unknown function DUF156; hypothetical protein 5318892 5541617 Rcas_4106 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434156.1 5318608 D 383372 CDS YP_001434157.1 156744028 5541618 complement(5319430..5320149) 1 NC_009767.1 KEGG: osa:4324628 Os01g0750600; hypothetical protein 5320149 5541618 Rcas_4107 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434157.1 5319430 R 383372 CDS YP_001434158.1 156744029 5541619 complement(5320139..5320726) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3810 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 5320726 5541619 Rcas_4108 Roseiflexus castenholzii DSM 13941 ECF subfamily RNA polymerase sigma-24 factor YP_001434158.1 5320139 R 383372 CDS YP_001434159.1 156744030 5541620 5320923..5321915 1 NC_009767.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 5321915 5541620 Rcas_4109 Roseiflexus castenholzii DSM 13941 dihydroxyacetone kinase subunit DhaK YP_001434159.1 5320923 D 383372 CDS YP_001434160.1 156744031 5541621 5321999..5322661 1 NC_009767.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: rrs:RoseRS_3298 dihydroxyacetone kinase, L subunit; dihydroxyacetone kinase subunit L 5322661 5541621 Rcas_4110 Roseiflexus castenholzii DSM 13941 dihydroxyacetone kinase subunit L YP_001434160.1 5321999 D 383372 CDS YP_001434161.1 156744032 5541622 5322679..5324349 1 NC_009767.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rrs:RoseRS_3299 FAD dependent oxidoreductase; FAD dependent oxidoreductase 5324349 5541622 Rcas_4111 Roseiflexus castenholzii DSM 13941 FAD dependent oxidoreductase YP_001434161.1 5322679 D 383372 CDS YP_001434162.1 156744033 5541623 5324413..5325657 1 NC_009767.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 5325657 5541623 Rcas_4112 Roseiflexus castenholzii DSM 13941 anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_001434162.1 5324413 D 383372 CDS YP_001434163.1 156744034 5541624 5325657..5326907 1 NC_009767.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 5326907 glpC 5541624 glpC Roseiflexus castenholzii DSM 13941 sn-glycerol-3-phosphate dehydrogenase subunit C YP_001434163.1 5325657 D 383372 CDS YP_001434164.1 156744035 5541625 5326909..5327319 1 NC_009767.1 PFAM: PTS system fructose subfamily IIA component; KEGG: rrs:RoseRS_3302 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 5327319 5541625 Rcas_4114 Roseiflexus castenholzii DSM 13941 PTS system fructose subfamily transporter subunit IIA YP_001434164.1 5326909 D 383372 CDS YP_001434165.1 156744036 5541626 5327375..5327650 1 NC_009767.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: rrs:RoseRS_3303 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 5327650 5541626 Rcas_4115 Roseiflexus castenholzii DSM 13941 phosphotransferase system, phosphocarrier protein HPr YP_001434165.1 5327375 D 383372 CDS YP_001434166.1 156744037 5541627 5327651..5329321 1 NC_009767.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: rrs:RoseRS_3304 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 5329321 5541627 Rcas_4116 Roseiflexus castenholzii DSM 13941 phosphoenolpyruvate-protein phosphotransferase YP_001434166.1 5327651 D 383372 CDS YP_001434167.1 156744038 5541628 5329318..5331321 1 NC_009767.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3305 protein kinase; serine/threonine protein kinase 5331321 5541628 Rcas_4117 Roseiflexus castenholzii DSM 13941 serine/threonine protein kinase YP_001434167.1 5329318 D 383372 CDS YP_001434168.1 156744039 5541629 5331455..5332831 1 NC_009767.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: rrs:RoseRS_1930 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; polynucleotide adenylyltransferase 5332831 5541629 Rcas_4118 Roseiflexus castenholzii DSM 13941 polynucleotide adenylyltransferase YP_001434168.1 5331455 D 383372 CDS YP_001434169.1 156744040 5541630 5332923..5333372 1 NC_009767.1 PFAM: heat shock protein Hsp20; KEGG: rrs:RoseRS_1929 heat shock protein HSP20; heat shock protein Hsp20 5333372 5541630 Rcas_4119 Roseiflexus castenholzii DSM 13941 heat shock protein Hsp20 YP_001434169.1 5332923 D 383372 CDS YP_001434170.1 156744041 5541631 5333563..5334453 1 NC_009767.1 PFAM: peptidase M48 Ste24p; KEGG: rrs:RoseRS_1928 peptidase M48, Ste24p; peptidase M48 Ste24p 5334453 5541631 Rcas_4120 Roseiflexus castenholzii DSM 13941 peptidase M48 Ste24p YP_001434170.1 5333563 D 383372 CDS YP_001434171.1 156744042 5541632 5334717..5335403 1 NC_009767.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 5335403 thiE 5541632 thiE Roseiflexus castenholzii DSM 13941 thiamine-phosphate pyrophosphorylase YP_001434171.1 5334717 D 383372 CDS YP_001434172.1 156744043 5541633 5335476..5336288 1 NC_009767.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 5336288 5541633 Rcas_4122 Roseiflexus castenholzii DSM 13941 hydroxyethylthiazole kinase YP_001434172.1 5335476 D 383372 CDS YP_001434173.1 156744044 5541634 5336538..5337062 1 NC_009767.1 TIGRFAM: thiW protein; PFAM: ThiW family protein; KEGG: rrs:RoseRS_1925 ThiW protein; thiW protein 5337062 5541634 Rcas_4123 Roseiflexus castenholzii DSM 13941 thiW protein YP_001434173.1 5336538 D 383372 CDS YP_001434174.1 156744045 5541635 5337059..5338639 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1924 ABC transporter related; ABC transporter-like protein 5338639 5541635 Rcas_4124 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001434174.1 5337059 D 383372 CDS YP_001434175.1 156744046 5541636 5340649..5341302 1 NC_009767.1 PFAM: cobalt transport protein; KEGG: rrs:RoseRS_1922 cobalt transport protein; cobalt transport protein 5341302 5541636 Rcas_4125 Roseiflexus castenholzii DSM 13941 cobalt transport protein YP_001434175.1 5340649 D 383372 CDS YP_001434176.1 156744047 5541637 5341313..5342113 1 NC_009767.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rrs:RoseRS_1921 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 5342113 5541637 Rcas_4126 Roseiflexus castenholzii DSM 13941 phosphomethylpyrimidine kinase YP_001434176.1 5341313 D 383372 CDS YP_001434177.1 156744048 5541638 5342245..5342820 1 NC_009767.1 KEGG: rrs:RoseRS_4091 DNA polymerase, beta domain protein region; hypothetical protein 5342820 5541638 Rcas_4127 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434177.1 5342245 D 383372 CDS YP_001434178.1 156744049 5541639 5342798..5343202 1 NC_009767.1 PFAM: HEPN domain protein; KEGG: rrs:RoseRS_4090 HEPN domain protein; HEPN domain-containing protein 5343202 5541639 Rcas_4128 Roseiflexus castenholzii DSM 13941 HEPN domain-containing protein YP_001434178.1 5342798 D 383372 CDS YP_001434179.1 156744050 5541640 complement(5343216..5344934) 1 NC_009767.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_1915 WD40 domain protein beta propeller; WD40 domain-containing protein 5344934 5541640 Rcas_4129 Roseiflexus castenholzii DSM 13941 WD40 domain-containing protein YP_001434179.1 5343216 R 383372 CDS YP_001434180.1 156744051 5541641 5345129..5345998 1 NC_009767.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_1914 alpha/beta hydrolase fold; alpha/beta hydrolase 5345998 5541641 Rcas_4130 Roseiflexus castenholzii DSM 13941 alpha/beta hydrolase YP_001434180.1 5345129 D 383372 CDS YP_001434181.1 156744052 5541642 5346011..5348044 1 NC_009767.1 PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_0410 glycosyl transferase, family 39; glycosyl transferase family protein 5348044 5541642 Rcas_4131 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001434181.1 5346011 D 383372 CDS YP_001434182.1 156744053 5541643 5348252..5349199 1 NC_009767.1 KEGG: rrs:RoseRS_1913 hypothetical protein; hypothetical protein 5349199 5541643 Rcas_4132 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434182.1 5348252 D 383372 CDS YP_001434183.1 156744054 5541645 5351524..5351877 1 NC_009767.1 KEGG: rrs:RoseRS_3372 hypothetical protein; hypothetical protein 5351877 5541645 Rcas_4134 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434183.1 5351524 D 383372 CDS YP_001434184.1 156744055 5541646 complement(5352339..5354291) 1 NC_009767.1 KEGG: rrs:RoseRS_3371 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase HD region; PAS/PAC sensor protein 5354291 5541646 Rcas_4135 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor protein YP_001434184.1 5352339 R 383372 CDS YP_001434185.1 156744056 5541647 complement(5354657..5355172) 1 NC_009767.1 KEGG: rrs:RoseRS_3370 hypothetical protein; hypothetical protein 5355172 5541647 Rcas_4136 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434185.1 5354657 R 383372 CDS YP_001434186.1 156744057 5541648 complement(5355178..5356473) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3369 glycosyl transferase, group 1; group 1 glycosyl transferase 5356473 5541648 Rcas_4137 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001434186.1 5355178 R 383372 CDS YP_001434187.1 156744058 5541649 complement(5356473..5358347) 1 NC_009767.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: rrs:RoseRS_3368 glycosyl transferase, family 2; glycosyl transferase family protein 5358347 5541649 Rcas_4138 Roseiflexus castenholzii DSM 13941 glycosyl transferase family protein YP_001434187.1 5356473 R 383372 CDS YP_001434188.1 156744059 5541650 complement(5358374..5360194) 1 NC_009767.1 PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_3367 ABC-2 type transporter; ABC-2 type transporter 5360194 5541650 Rcas_4139 Roseiflexus castenholzii DSM 13941 ABC-2 type transporter YP_001434188.1 5358374 R 383372 CDS YP_001434189.1 156744060 5541651 complement(5360198..5361937) 1 NC_009767.1 KEGG: rrs:RoseRS_3366 hypothetical protein; hypothetical protein 5361937 5541651 Rcas_4140 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434189.1 5360198 R 383372 CDS YP_001434190.1 156744061 5541652 complement(5361925..5363790) 1 NC_009767.1 PFAM: polysaccharide deacetylase; KEGG: rrs:RoseRS_3365 polysaccharide deacetylase; polysaccharide deacetylase 5363790 5541652 Rcas_4141 Roseiflexus castenholzii DSM 13941 polysaccharide deacetylase YP_001434190.1 5361925 R 383372 CDS YP_001434191.1 156744062 5541653 5364017..5364577 1 NC_009767.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 5364577 5541653 Rcas_4142 Roseiflexus castenholzii DSM 13941 methionine sulfoxide reductase A YP_001434191.1 5364017 D 383372 CDS YP_001434192.1 156744063 5541654 complement(5364580..5365284) 1 NC_009767.1 PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_3363 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 5365284 5541654 Rcas_4143 Roseiflexus castenholzii DSM 13941 phosphatidate cytidylyltransferase YP_001434192.1 5364580 R 383372 CDS YP_001434193.1 156744064 5541655 complement(5365885..5367171) 1 NC_009767.1 PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3362 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 5367171 5541655 Rcas_4144 Roseiflexus castenholzii DSM 13941 FAD linked oxidase domain-containing protein YP_001434193.1 5365885 R 383372 CDS YP_001434194.1 156744065 5541656 complement(5367188..5367586) 1 NC_009767.1 KEGG: pth:PTH_2559 uncharacterized protein conserved in cyanobacteria; hypothetical protein 5367586 5541656 Rcas_4145 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434194.1 5367188 R 383372 CDS YP_001434195.1 156744066 5541657 complement(5367656..5369137) 1 NC_009767.1 PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3360 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase 5369137 5541657 Rcas_4146 Roseiflexus castenholzii DSM 13941 D-lactate dehydrogenase YP_001434195.1 5367656 R 383372 CDS YP_001434196.1 156744067 5541658 complement(5369134..5369886) 1 NC_009767.1 PFAM: Peptidoglycan-binding LysM; KEGG: par:Psyc_1273 probable membrane-bound lytic murein transglycosylase D precursor; peptidoglycan-binding protein LysM 5369886 5541658 Rcas_4147 Roseiflexus castenholzii DSM 13941 peptidoglycan-binding protein LysM YP_001434196.1 5369134 R 383372 CDS YP_001434197.1 156744068 5541659 complement(5370042..5371574) 1 NC_009767.1 acts as a promotor non-specific transcription repressor; circadian clock protein KaiC 5371574 5541659 Rcas_4148 Roseiflexus castenholzii DSM 13941 circadian clock protein KaiC YP_001434197.1 5370042 R 383372 CDS YP_001434198.1 156744069 5541660 complement(5371571..5371876) 1 NC_009767.1 PFAM: KaiB domain protein; KEGG: rrs:RoseRS_3358 KaiB domain protein; KaiB domain-containing protein 5371876 5541660 Rcas_4149 Roseiflexus castenholzii DSM 13941 KaiB domain-containing protein YP_001434198.1 5371571 R 383372 CDS YP_001434199.1 156744070 5541661 complement(5371950..5372825) 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3357 response regulator receiver protein; response regulator receiver protein 5372825 5541661 Rcas_4150 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001434199.1 5371950 R 383372 CDS YP_001434200.1 156744071 5541662 complement(5372848..5374086) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: rrs:RoseRS_3356 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 5374086 5541662 Rcas_4151 Roseiflexus castenholzii DSM 13941 PAS/PAC sensor signal transduction histidine kinase YP_001434200.1 5372848 R 383372 CDS YP_001434201.1 156744072 5541663 5374259..5374627 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3355 two component transcriptional regulator, fis family; response regulator receiver protein 5374627 5541663 Rcas_4152 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001434201.1 5374259 D 383372 CDS YP_001434202.1 156744073 5541664 5375062..5375865 1 NC_009767.1 PFAM: SAF domain protein; KEGG: rrs:RoseRS_3354 SAF domain; SAF domain-containing protein 5375865 5541664 Rcas_4153 Roseiflexus castenholzii DSM 13941 SAF domain-containing protein YP_001434202.1 5375062 D 383372 CDS YP_001434203.1 156744074 5541665 5376054..5377313 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3353 response regulator receiver protein; response regulator receiver protein 5377313 5541665 Rcas_4154 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001434203.1 5376054 D 383372 CDS YP_001434204.1 156744075 5541666 5377329..5378744 1 NC_009767.1 PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_3352 type II secretion system protein E; type II secretion system protein E 5378744 5541666 Rcas_4155 Roseiflexus castenholzii DSM 13941 type II secretion system protein E YP_001434204.1 5377329 D 383372 CDS YP_001434205.1 156744076 5541667 5378759..5379730 1 NC_009767.1 PFAM: type II secretion system protein; KEGG: rrs:RoseRS_3351 type II secretion system protein; type II secretion system protein 5379730 5541667 Rcas_4156 Roseiflexus castenholzii DSM 13941 type II secretion system protein YP_001434205.1 5378759 D 383372 CDS YP_001434206.1 156744077 5541668 5379730..5380659 1 NC_009767.1 PFAM: type II secretion system protein; KEGG: rrs:RoseRS_3350 type II secretion system protein; type II secretion system protein 5380659 5541668 Rcas_4157 Roseiflexus castenholzii DSM 13941 type II secretion system protein YP_001434206.1 5379730 D 383372 CDS YP_001434207.1 156744078 5541669 5380656..5381945 1 NC_009767.1 PFAM: von Willebrand factor type A; VWA containing CoxE family protein; KEGG: rrs:RoseRS_3349 von Willebrand factor, type A; von Willebrand factor A 5381945 5541669 Rcas_4158 Roseiflexus castenholzii DSM 13941 von Willebrand factor A YP_001434207.1 5380656 D 383372 CDS YP_001434208.1 156744079 5541670 5382198..5383595 1 NC_009767.1 PFAM: TadE family protein; KEGG: rrs:RoseRS_3348 TadE family protein; TadE family protein 5383595 5541670 Rcas_4159 Roseiflexus castenholzii DSM 13941 TadE family protein YP_001434208.1 5382198 D 383372 CDS YP_001434209.1 156744080 5541671 5383732..5384127 1 NC_009767.1 PFAM: TadE family protein; KEGG: rrs:RoseRS_3347 TadE family protein; TadE family protein 5384127 5541671 Rcas_4160 Roseiflexus castenholzii DSM 13941 TadE family protein YP_001434209.1 5383732 D 383372 CDS YP_001434210.1 156744081 5541672 5384124..5385302 1 NC_009767.1 KEGG: rrs:RoseRS_3346 hypothetical protein; hypothetical protein 5385302 5541672 Rcas_4161 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434210.1 5384124 D 383372 CDS YP_001434211.1 156744082 5541673 complement(5385428..5386381) 1 NC_009767.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: rrs:RoseRS_3345 peptide chain release factor 2; peptide chain release factor 2 5386381 5541673 Rcas_4162 Roseiflexus castenholzii DSM 13941 peptide chain release factor 2 YP_001434211.1 5385428 R 383372 CDS YP_001434212.1 156744083 5541674 complement(5386548..5387318) 1 NC_009767.1 PFAM: Silent information regulator protein Sir2; KEGG: rrs:RoseRS_3344 silent information regulator protein Sir2; silent information regulator protein Sir2 5387318 5541674 Rcas_4163 Roseiflexus castenholzii DSM 13941 silent information regulator protein Sir2 YP_001434212.1 5386548 R 383372 CDS YP_001434213.1 156744084 5541675 5387671..5388396 1 NC_009767.1 PFAM: LIM zinc-binding protein; KEGG: rrs:RoseRS_3343 LIM, zinc-binding protein; LIM zinc-binding protein 5388396 5541675 Rcas_4164 Roseiflexus castenholzii DSM 13941 LIM zinc-binding protein YP_001434213.1 5387671 D 383372 CDS YP_001434214.1 156744085 5541676 5388520..5389707 1 NC_009767.1 KEGG: rrs:RoseRS_3512 hypothetical protein; hypothetical protein 5389707 5541676 Rcas_4165 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434214.1 5388520 D 383372 CDS YP_001434215.1 156744086 5541677 5389990..5390550 1 NC_009767.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rrs:RoseRS_3311 metal dependent phosphohydrolase; metal dependent phosphohydrolase 5390550 5541677 Rcas_4166 Roseiflexus castenholzii DSM 13941 metal dependent phosphohydrolase YP_001434215.1 5389990 D 383372 CDS YP_001434216.1 156744087 5541678 5390600..5392324 1 NC_009767.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_3310 alpha amylase, catalytic region; alpha amylase 5392324 5541678 Rcas_4167 Roseiflexus castenholzii DSM 13941 alpha amylase YP_001434216.1 5390600 D 383372 CDS YP_001434217.1 156744088 5541679 complement(5392676..5394565) 1 NC_009767.1 molecular chaperone; heat shock protein 90 5394565 5541679 Rcas_4168 Roseiflexus castenholzii DSM 13941 heat shock protein 90 YP_001434217.1 5392676 R 383372 CDS YP_001434218.1 156744089 5541680 complement(5394790..5396223) 1 NC_009767.1 PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_4302 secretion protein HlyD family protein; secretion protein HlyD family protein 5396223 5541680 Rcas_4169 Roseiflexus castenholzii DSM 13941 secretion protein HlyD family protein YP_001434218.1 5394790 R 383372 CDS YP_001434219.1 156744090 5541681 complement(5396332..5399847) 1 NC_009767.1 PFAM: acriflavin resistance protein; KEGG: rrs:RoseRS_4303 acriflavin resistance protein; acriflavin resistance protein 5399847 5541681 Rcas_4170 Roseiflexus castenholzii DSM 13941 acriflavin resistance protein YP_001434219.1 5396332 R 383372 CDS YP_001434220.1 156744091 5541682 5400440..5401051 1 NC_009767.1 PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_4304 transcriptional regulator, TetR family; TetR family transcriptional regulator 5401051 5541682 Rcas_4171 Roseiflexus castenholzii DSM 13941 TetR family transcriptional regulator YP_001434220.1 5400440 D 383372 CDS YP_001434221.1 156744092 5541683 complement(5401974..5402972) 1 NC_009767.1 hypothetical protein 5402972 5541683 Rcas_4172 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434221.1 5401974 R 383372 CDS YP_001434222.1 156744093 5541684 complement(5403268..5404989) 1 NC_009767.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_4311 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 5404989 5541684 Rcas_4173 Roseiflexus castenholzii DSM 13941 acyl-CoA dehydrogenase YP_001434222.1 5403268 R 383372 CDS YP_001434223.1 156744094 5541685 5405540..5406457 1 NC_009767.1 PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_4313 radical SAM domain protein; radical SAM domain-containing protein 5406457 5541685 Rcas_4174 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001434223.1 5405540 D 383372 CDS YP_001434224.1 156744095 5541686 5406454..5406951 1 NC_009767.1 KEGG: rrs:RoseRS_4314 hypothetical protein; hypothetical protein 5406951 5541686 Rcas_4175 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434224.1 5406454 D 383372 CDS YP_001434225.1 156744096 5541687 5407008..5407778 1 NC_009767.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: btl:BALH_2563 methyltransferase; type 11 methyltransferase 5407778 5541687 Rcas_4176 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001434225.1 5407008 D 383372 CDS YP_001434226.1 156744097 5541688 5407934..5408581 1 NC_009767.1 KEGG: nma:NMA0324 adhesin; hypothetical protein 5408581 5541688 Rcas_4177 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434226.1 5407934 D 383372 CDS YP_001434227.1 156744098 5541689 5408600..5408806 1 NC_009767.1 hypothetical protein 5408806 5541689 Rcas_4178 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434227.1 5408600 D 383372 CDS YP_001434228.1 156744099 5541690 complement(5408961..5410016) 1 NC_009767.1 PFAM: oxidoreductase molybdopterin binding; KEGG: rrs:RoseRS_4315 oxidoreductase, molybdopterin binding; molybdopterin binding oxidoreductase 5410016 5541690 Rcas_4179 Roseiflexus castenholzii DSM 13941 molybdopterin binding oxidoreductase YP_001434228.1 5408961 R 383372 CDS YP_001434229.1 156744100 5541691 complement(5410020..5410634) 1 NC_009767.1 KEGG: rrs:RoseRS_4316 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 5410634 5541691 Rcas_4180 Roseiflexus castenholzii DSM 13941 dephospho-CoA kinase YP_001434229.1 5410020 R 383372 CDS YP_001434230.1 156744101 5541692 complement(5410647..5412638) 1 NC_009767.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rrs:RoseRS_4317 amidohydrolase; amidohydrolase 5412638 5541692 Rcas_4181 Roseiflexus castenholzii DSM 13941 amidohydrolase YP_001434230.1 5410647 R 383372 CDS YP_001434231.1 156744102 5541694 complement(5413189..5414301) 1 NC_009767.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: xfa:XF0641 DNA methyltransferase; DNA methylase N-4/N-6 domain-containing protein 5414301 5541694 Rcas_4183 Roseiflexus castenholzii DSM 13941 DNA methylase N-4/N-6 domain-containing protein YP_001434231.1 5413189 R 383372 CDS YP_001434232.1 156744103 5541695 complement(5414309..5414878) 1 NC_009767.1 KEGG: rrs:RoseRS_4319 hypothetical protein; hypothetical protein 5414878 5541695 Rcas_4184 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434232.1 5414309 R 383372 CDS YP_001434233.1 156744104 5541696 complement(5414899..5415249) 1 NC_009767.1 KEGG: rrs:RoseRS_4320 hypothetical protein; hypothetical protein 5415249 5541696 Rcas_4185 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434233.1 5414899 R 383372 CDS YP_001434234.1 156744105 5541697 complement(5415292..5416359) 1 NC_009767.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: rrs:RoseRS_4321 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 5416359 5541697 Rcas_4186 Roseiflexus castenholzii DSM 13941 Sua5/YciO/YrdC/YwlC family protein YP_001434234.1 5415292 R 383372 CDS YP_001434235.1 156744106 5541698 complement(5416356..5416826) 1 NC_009767.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: rrs:RoseRS_4322 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 5416826 5541698 Rcas_4187 Roseiflexus castenholzii DSM 13941 flavin reductase domain-containing protein YP_001434235.1 5416356 R 383372 CDS YP_001434236.1 156744107 5541699 complement(5417054..5420596) 1 NC_009767.1 PFAM: UvrD/REP helicase; protein of unknown function DUF955; KEGG: rrs:RoseRS_0060 UvrD/REP helicase; UvrD/REP helicase 5420596 5541699 Rcas_4188 Roseiflexus castenholzii DSM 13941 UvrD/REP helicase YP_001434236.1 5417054 R 383372 CDS YP_001434237.1 156744108 5541700 complement(5421031..5421651) 1 NC_009767.1 SMART: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0059 helix-turn-helix domain protein; helix-turn-helix domain-containing protein 5421651 5541700 Rcas_4189 Roseiflexus castenholzii DSM 13941 helix-turn-helix domain-containing protein YP_001434237.1 5421031 R 383372 CDS YP_001434238.1 156744109 5541701 complement(5421648..5422310) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0058 RNA polymerase, sigma-24 subunit, ECF subfamily; FliA/WhiG family RNA polymerase sigma 28 subunit 5422310 5541701 Rcas_4190 Roseiflexus castenholzii DSM 13941 FliA/WhiG family RNA polymerase sigma 28 subunit YP_001434238.1 5421648 R 383372 CDS YP_001434239.1 156744110 5541702 5422770..5423069 1 NC_009767.1 KEGG: rrs:RoseRS_0057 hypothetical protein; hypothetical protein 5423069 5541702 Rcas_4191 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434239.1 5422770 D 383372 CDS YP_001434240.1 156744111 5541703 complement(5423293..5423511) 1 NC_009767.1 KEGG: rrs:RoseRS_0054 hypothetical protein; hypothetical protein 5423511 5541703 Rcas_4192 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434240.1 5423293 R 383372 CDS YP_001434241.1 156744112 5541704 5423743..5424909 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0053 anti-sigma-factor antagonist; anti-sigma-factor antagonist 5424909 5541704 Rcas_4193 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001434241.1 5423743 D 383372 CDS YP_001434242.1 156744113 5541705 5425194..5426342 1 NC_009767.1 PFAM: peptidase M23B; KEGG: rrs:RoseRS_0052 peptidase M23B; peptidase M23B 5426342 5541705 Rcas_4194 Roseiflexus castenholzii DSM 13941 peptidase M23B YP_001434242.1 5425194 D 383372 CDS YP_001434243.1 156744114 5541706 complement(5426755..5428716) 1 NC_009767.1 KEGG: rrs:RoseRS_0047 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 5428716 5541706 Rcas_4195 Roseiflexus castenholzii DSM 13941 DNA gyrase subunit B YP_001434243.1 5426755 R 383372 CDS YP_001434244.1 156744115 5541707 complement(5428872..5429843) 1 NC_009767.1 KEGG: rrs:RoseRS_0046 hypothetical protein; hypothetical protein 5429843 5541707 Rcas_4196 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434244.1 5428872 R 383372 CDS YP_001434245.1 156744116 5541708 5430074..5431810 1 NC_009767.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_0045 GTPase subunit of restriction endonuclease-like protein; ATPase 5431810 5541708 Rcas_4197 Roseiflexus castenholzii DSM 13941 ATPase YP_001434245.1 5430074 D 383372 CDS YP_001434246.1 156744117 5541710 5433872..5435227 1 NC_009767.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 5435227 5541710 Rcas_4199 Roseiflexus castenholzii DSM 13941 adenylosuccinate lyase YP_001434246.1 5433872 D 383372 CDS YP_001434247.1 156744118 5541711 complement(5435298..5435717) 1 NC_009767.1 PFAM: protein of unknown function DUF454; KEGG: rrs:RoseRS_0042 protein of unknown function DUF454; hypothetical protein 5435717 5541711 Rcas_4200 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434247.1 5435298 R 383372 CDS YP_001434248.1 156744119 5541714 5436772..5437263 1 NC_009767.1 PFAM: CheW domain protein; KEGG: rrs:RoseRS_0039 CheW protein; CheW protein 5437263 5541714 Rcas_4203 Roseiflexus castenholzii DSM 13941 CheW protein YP_001434248.1 5436772 D 383372 CDS YP_001434249.1 156744120 5541715 5437672..5438091 1 NC_009767.1 KEGG: rrs:RoseRS_0038 hypothetical protein; hypothetical protein 5438091 5541715 Rcas_4204 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434249.1 5437672 D 383372 CDS YP_001434250.1 156744121 5541716 5438099..5439640 1 NC_009767.1 PFAM: chemotaxis sensory transducer; KEGG: rrs:RoseRS_0037 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5439640 5541716 Rcas_4205 Roseiflexus castenholzii DSM 13941 methyl-accepting chemotaxis sensory transducer YP_001434250.1 5438099 D 383372 CDS YP_001434251.1 156744122 5541717 5439744..5441969 1 NC_009767.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rrs:RoseRS_0036 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase 5441969 5541717 Rcas_4206 Roseiflexus castenholzii DSM 13941 CheA signal transduction histidine kinase YP_001434251.1 5439744 D 383372 CDS YP_001434252.1 156744123 5541718 5442041..5442403 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_0035 response regulator receiver protein; response regulator receiver protein 5442403 5541718 Rcas_4207 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001434252.1 5442041 D 383372 CDS YP_001434253.1 156744124 5541719 5442584..5443717 1 NC_009767.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: rrs:RoseRS_0034 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase 5443717 5541719 Rcas_4208 Roseiflexus castenholzii DSM 13941 response regulator receiver modulated CheB methylesterase YP_001434253.1 5442584 D 383372 CDS YP_001434254.1 156744125 5541720 5444002..5445510 1 NC_009767.1 KEGG: rrs:RoseRS_0033 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing CheR-type MCP methyltransferase 5445510 5541720 Rcas_4209 Roseiflexus castenholzii DSM 13941 TPR repeat-containing CheR-type MCP methyltransferase YP_001434254.1 5444002 D 383372 CDS YP_001434255.1 156744126 5541721 5445517..5446602 1 NC_009767.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_0032 stage II sporulation E family protein; Ser/Thr phosphatase 5446602 5541721 Rcas_4210 Roseiflexus castenholzii DSM 13941 Ser/Thr phosphatase YP_001434255.1 5445517 D 383372 CDS YP_001434256.1 156744127 5541722 5446724..5448292 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0031 TPR repeat-containing protein; hypothetical protein 5448292 5541722 Rcas_4211 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434256.1 5446724 D 383372 CDS YP_001434257.1 156744128 5541723 5448314..5448748 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_0030 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 5448748 5541723 Rcas_4212 Roseiflexus castenholzii DSM 13941 anti-sigma regulatory factor YP_001434257.1 5448314 D 383372 CDS YP_001434258.1 156744129 5541724 5448738..5449082 1 NC_009767.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0029 anti-sigma-factor antagonist; anti-sigma-factor antagonist 5449082 5541724 Rcas_4213 Roseiflexus castenholzii DSM 13941 anti-sigma-factor antagonist YP_001434258.1 5448738 D 383372 CDS YP_001434259.1 156744130 5541725 complement(5449502..5450632) 1 NC_009767.1 KEGG: rrs:RoseRS_0028 hypothetical protein; hypothetical protein 5450632 5541725 Rcas_4214 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434259.1 5449502 R 383372 CDS YP_001434260.1 156744131 5541726 5450649..5451458 1 NC_009767.1 PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_0027 transcriptional regulator, TetR family; TetR family transcriptional regulator 5451458 5541726 Rcas_4215 Roseiflexus castenholzii DSM 13941 TetR family transcriptional regulator YP_001434260.1 5450649 D 383372 CDS YP_001434261.1 156744132 5541727 5453613..5455073 1 NC_009767.1 KEGG: rrs:RoseRS_0026 isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Anthranilate synthase component I and chorismate binding protein; isochorismate synthase 5455073 5541727 Rcas_4216 Roseiflexus castenholzii DSM 13941 isochorismate synthase YP_001434261.1 5453613 D 383372 CDS YP_001434262.1 156744133 5541728 5455439..5457181 1 NC_009767.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; KEGG: rrs:RoseRS_0025 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 5457181 5541728 Rcas_4217 Roseiflexus castenholzii DSM 13941 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase YP_001434262.1 5455439 D 383372 CDS YP_001434263.1 156744134 5541729 5457280..5458143 1 NC_009767.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_0024 naphthoate synthase; naphthoate synthase 5458143 5541729 Rcas_4218 Roseiflexus castenholzii DSM 13941 naphthoate synthase YP_001434263.1 5457280 D 383372 CDS YP_001434264.1 156744135 5541730 5458140..5459615 1 NC_009767.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_0023 O-succinylbenzoate-CoA ligase; o-succinylbenzoate--CoA ligase 5459615 5541730 Rcas_4219 Roseiflexus castenholzii DSM 13941 o-succinylbenzoate--CoA ligase YP_001434264.1 5458140 D 383372 CDS YP_001434265.1 156744136 5541731 complement(5459900..5460847) 1 NC_009767.1 PFAM: aminoglycoside phosphotransferase; KEGG: sma:SAV5110 phosphotransferase; aminoglycoside phosphotransferase 5460847 5541731 Rcas_4220 Roseiflexus castenholzii DSM 13941 aminoglycoside phosphotransferase YP_001434265.1 5459900 R 383372 CDS YP_001434266.1 156744137 5541732 complement(5461271..5461570) 1 NC_009767.1 KEGG: rrs:RoseRS_0018 hypothetical protein; hypothetical protein 5461570 5541732 Rcas_4221 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434266.1 5461271 R 383372 CDS YP_001434267.1 156744138 5541733 5461758..5462687 1 NC_009767.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: reh:H16_B0754 transcriptional regulator, LuxR-family; ATP-dependent transcription regulator LuxR 5462687 5541733 Rcas_4222 Roseiflexus castenholzii DSM 13941 ATP-dependent transcription regulator LuxR YP_001434267.1 5461758 D 383372 CDS YP_001434268.1 156744139 5541734 5462974..5463612 1 NC_009767.1 PFAM: protein of unknown function DUF1568; KEGG: rba:RB693 hypothetical protein; hypothetical protein 5463612 5541734 Rcas_4223 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434268.1 5462974 D 383372 CDS YP_001434269.1 156744140 5541735 5464244..5464756 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRA0622 acetyltransferase; N-acetyltransferase GCN5 5464756 5541735 Rcas_4224 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001434269.1 5464244 D 383372 CDS YP_001434270.1 156744141 5541736 complement(5464796..5465557) 1 NC_009767.1 PFAM: Abortive infection protein; KEGG: mac:MA2652 hypothetical protein; abortive infection protein 5465557 5541736 Rcas_4225 Roseiflexus castenholzii DSM 13941 abortive infection protein YP_001434270.1 5464796 R 383372 CDS YP_001434271.1 156744142 5541737 complement(5465677..5467725) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: two-component sensor; integral membrane sensor signal transduction histidine kinase 5467725 5541737 Rcas_4226 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001434271.1 5465677 R 383372 CDS YP_001434272.1 156744143 5541738 complement(5467730..5468371) 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: DNA-binding response regulator; two component LuxR family transcriptional regulator 5468371 5541738 Rcas_4227 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001434272.1 5467730 R 383372 CDS YP_001434273.1 156744144 5541739 5469867..5470247 1 NC_009767.1 PFAM: response regulator receiver; KEGG: tfu:Tfu_2233 regulatory protein, LuxR:response regulator receiver; response regulator receiver protein 5470247 5541739 Rcas_4228 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001434273.1 5469867 D 383372 CDS YP_001434274.1 156744145 5541740 5470244..5470540 1 NC_009767.1 KEGG: pcu:pc1644 hypothetical protein; hypothetical protein 5470540 5541740 Rcas_4229 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434274.1 5470244 D 383372 CDS YP_001434275.1 156744146 5541741 5470547..5471155 1 NC_009767.1 PFAM: protein of unknown function DUF1211; KEGG: rxy:Rxyl_2895 protein of unknown function DUF1211; hypothetical protein 5471155 5541741 Rcas_4230 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434275.1 5470547 D 383372 CDS YP_001434276.1 156744147 5541742 complement(5471339..5471959) 1 NC_009767.1 KEGG: tel:tll2424 unknown protein; hypothetical protein 5471959 5541742 Rcas_4231 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434276.1 5471339 R 383372 CDS YP_001434277.1 156744148 5541743 complement(5471902..5472561) 1 NC_009767.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: mth:MTH328 hypothetical protein; CRISPR-associated RAMP Cmr1 family protein 5472561 5541743 Rcas_4232 Roseiflexus castenholzii DSM 13941 CRISPR-associated RAMP Cmr1 family protein YP_001434277.1 5471902 R 383372 CDS YP_001434278.1 156744149 5541744 complement(5472683..5472985) 1 NC_009767.1 hypothetical protein 5472985 5541744 Rcas_4233 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434278.1 5472683 R 383372 CDS YP_001434279.1 156744150 5541745 complement(5473213..5473872) 1 NC_009767.1 KEGG: vco:VC0395_0898 hypothetical protein; hypothetical protein 5473872 5541745 Rcas_4234 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434279.1 5473213 R 383372 CDS YP_001434280.1 156744151 5541746 complement(5474275..5474733) 1 NC_009767.1 PFAM: AIG2 family protein; KEGG: cyb:CYB_1529 hypothetical protein; AIG2 family protein 5474733 5541746 Rcas_4235 Roseiflexus castenholzii DSM 13941 AIG2 family protein YP_001434280.1 5474275 R 383372 CDS YP_001434281.1 156744152 5541747 complement(5475351..5476025) 1 NC_009767.1 KEGG: plu:plu3301 hypothetical protein; hypothetical protein 5476025 5541747 Rcas_4236 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434281.1 5475351 R 383372 CDS YP_001434282.1 156744153 5541748 complement(5476022..5477134) 1 NC_009767.1 KEGG: aav:Aave_0765 hypothetical protein; hypothetical protein 5477134 5541748 Rcas_4237 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434282.1 5476022 R 383372 CDS YP_001434283.1 156744154 5541749 complement(5477491..5478318) 1 NC_009767.1 KEGG: rrs:RoseRS_2587 hypothetical protein; hypothetical protein 5478318 5541749 Rcas_4238 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434283.1 5477491 R 383372 CDS YP_001434284.1 156744155 5541750 complement(5478329..5478718) 1 NC_009767.1 KEGG: rrs:RoseRS_2588 hypothetical protein; hypothetical protein 5478718 5541750 Rcas_4239 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434284.1 5478329 R 383372 CDS YP_001434285.1 156744156 5541751 complement(5478708..5479694) 1 NC_009767.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_2589 CRISPR-associated RAMP protein, Cmr4 family; CRISPR-associated RAMP Cmr4 family protein 5479694 5541751 Rcas_4240 Roseiflexus castenholzii DSM 13941 CRISPR-associated RAMP Cmr4 family protein YP_001434285.1 5478708 R 383372 CDS YP_001434286.1 156744157 5541752 complement(5479705..5482494) 1 NC_009767.1 TIGRFAM: CRISPR-associated protein Csx11; KEGG: rrs:RoseRS_2590 hypothetical protein; CRISPR-associated Csx11 family protein 5482494 5541752 Rcas_4241 Roseiflexus castenholzii DSM 13941 CRISPR-associated Csx11 family protein YP_001434286.1 5479705 R 383372 CDS YP_001434287.1 156744158 5541753 complement(5482491..5483810) 1 NC_009767.1 PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_2591 protein of unknown function DUF324; hypothetical protein 5483810 5541753 Rcas_4242 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434287.1 5482491 R 383372 CDS YP_001434288.1 156744159 5541754 complement(5483807..5484511) 1 NC_009767.1 hypothetical protein 5484511 5541754 Rcas_4243 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434288.1 5483807 R 383372 CDS YP_001434289.1 156744160 5541755 complement(5484508..5486124) 1 NC_009767.1 KEGG: rrs:RoseRS_2592 hypothetical protein; hypothetical protein 5486124 5541755 Rcas_4244 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434289.1 5484508 R 383372 CDS YP_001434290.1 156744161 5541756 complement(5486121..5487191) 1 NC_009767.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: rrs:RoseRS_2593 CRISPR-associated RAMP protein, Cmr1 family; CRISPR-associated RAMP Cmr1 family protein 5487191 5541756 Rcas_4245 Roseiflexus castenholzii DSM 13941 CRISPR-associated RAMP Cmr1 family protein YP_001434290.1 5486121 R 383372 CDS YP_001434291.1 156744162 5541757 complement(5488068..5489849) 1 NC_009767.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_0014 alpha amylase, catalytic region; alpha amylase catalytic domain-containing protein 5489849 5541757 Rcas_4246 Roseiflexus castenholzii DSM 13941 alpha amylase catalytic domain-containing protein YP_001434291.1 5488068 R 383372 CDS YP_001434292.1 156744163 5541758 complement(5489846..5490298) 1 NC_009767.1 KEGG: rrs:RoseRS_0013 hypothetical protein; hypothetical protein 5490298 5541758 Rcas_4247 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434292.1 5489846 R 383372 CDS YP_001434293.1 156744164 5541759 complement(5490621..5491574) 1 NC_009767.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_0012 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 5491574 5541759 Rcas_4248 Roseiflexus castenholzii DSM 13941 phospholipid/glycerol acyltransferase YP_001434293.1 5490621 R 383372 CDS YP_001434294.1 156744165 5541760 complement(5491582..5492394) 1 NC_009767.1 KEGG: rrs:RoseRS_0011 deoxyribodipyrimidine photolyase-like protein; deoxyribodipyrimidine photolyase-like protein 5492394 5541760 Rcas_4249 Roseiflexus castenholzii DSM 13941 deoxyribodipyrimidine photolyase-like protein YP_001434294.1 5491582 R 383372 CDS YP_001434295.1 156744166 5541761 complement(5492439..5492600) 1 NC_009767.1 KEGG: cme:CML092C hypothetical protein, conserved Pfam: zf-HIT; hypothetical protein 5492600 5541761 Rcas_4250 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434295.1 5492439 R 383372 CDS YP_001434296.1 156744167 5541762 complement(5492720..5494246) 1 NC_009767.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: rrs:RoseRS_0009 deoxyribodipyrimidine photolyase-related protein; deoxyribodipyrimidine photolyase-like protein 5494246 5541762 Rcas_4251 Roseiflexus castenholzii DSM 13941 deoxyribodipyrimidine photolyase-like protein YP_001434296.1 5492720 R 383372 CDS YP_001434297.1 156744168 5541763 5494738..5495475 1 NC_009767.1 PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_0008 phosphoglycerate mutase; phosphoglycerate mutase 5495475 5541763 Rcas_4252 Roseiflexus castenholzii DSM 13941 phosphoglycerate mutase YP_001434297.1 5494738 D 383372 CDS YP_001434298.1 156744169 5541764 5495503..5496015 1 NC_009767.1 KEGG: rrs:RoseRS_0007 hypothetical protein; hypothetical protein 5496015 5541764 Rcas_4253 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434298.1 5495503 D 383372 CDS YP_001434299.1 156744170 5541765 5496017..5496748 1 NC_009767.1 KEGG: rrs:RoseRS_0006 hypothetical protein; hypothetical protein 5496748 5541765 Rcas_4254 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434299.1 5496017 D 383372 CDS YP_001434300.1 156744171 5541766 5496935..5498338 1 NC_009767.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_0005 ferredoxin--NADP(+) reductase; ferredoxin--NADP(+) reductase 5498338 5541766 Rcas_4255 Roseiflexus castenholzii DSM 13941 ferredoxin--NADP(+) reductase YP_001434300.1 5496935 D 383372 CDS YP_001434301.1 156744172 5541767 complement(5498316..5498615) 1 NC_009767.1 KEGG: rrs:RoseRS_0556 hypothetical protein; hypothetical protein 5498615 5541767 Rcas_4256 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434301.1 5498316 R 383372 CDS YP_001434302.1 156744173 5541768 5498792..5499223 1 NC_009767.1 hypothetical protein 5499223 5541768 Rcas_4257 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434302.1 5498792 D 383372 CDS YP_001434303.1 156744174 5541769 complement(5499337..5501070) 1 NC_009767.1 PFAM: Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rrs:RoseRS_0555 ferrous iron transport protein B domain protein; ferrous iron transport B domain-containing protein 5501070 5541769 Rcas_4258 Roseiflexus castenholzii DSM 13941 ferrous iron transport B domain-containing protein YP_001434303.1 5499337 R 383372 CDS YP_001434304.1 156744175 5541770 complement(5501070..5501600) 1 NC_009767.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: rrs:RoseRS_0554 small GTP-binding protein; small GTP-binding protein 5501600 5541770 Rcas_4259 Roseiflexus castenholzii DSM 13941 small GTP-binding protein YP_001434304.1 5501070 R 383372 CDS YP_001434305.1 156744176 5541771 complement(5501600..5501851) 1 NC_009767.1 PFAM: FeoA family protein; KEGG: rrs:RoseRS_0553 FeoA family protein; FeoA family protein 5501851 5541771 Rcas_4260 Roseiflexus castenholzii DSM 13941 FeoA family protein YP_001434305.1 5501600 R 383372 CDS YP_001434306.1 156744177 5541772 complement(5501838..5502092) 1 NC_009767.1 PFAM: FeoA family protein; KEGG: rrs:RoseRS_0552 FeoA family protein; FeoA family protein 5502092 5541772 Rcas_4261 Roseiflexus castenholzii DSM 13941 FeoA family protein YP_001434306.1 5501838 R 383372 CDS YP_001434307.1 156744178 5541773 complement(5502508..5503695) 1 NC_009767.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_0168 aminotransferase, class V; class V aminotransferase 5503695 5541773 Rcas_4262 Roseiflexus castenholzii DSM 13941 class V aminotransferase YP_001434307.1 5502508 R 383372 CDS YP_001434308.1 156744179 5541774 complement(5503688..5504467) 1 NC_009767.1 KEGG: rrs:RoseRS_0169 cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase 5504467 5541774 Rcas_4263 Roseiflexus castenholzii DSM 13941 cobalt ABC transporter ATPase YP_001434308.1 5503688 R 383372 CDS YP_001434309.1 156744180 5541775 5505003..5505209 1 NC_009767.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_3576 twin-arginine translocation protein, TatA/E family subunit; twin arginine-targeting protein translocase 5505209 5541775 Rcas_4264 Roseiflexus castenholzii DSM 13941 twin arginine-targeting protein translocase YP_001434309.1 5505003 D 383372 CDS YP_001434310.1 156744181 5541776 5505288..5506652 1 NC_009767.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG domain protein; KEGG: rrs:RoseRS_3577 GTP1/OBG sub domain protein; GTP-binding protein Obg/CgtA 5506652 5541776 Rcas_4265 Roseiflexus castenholzii DSM 13941 GTP-binding protein Obg/CgtA YP_001434310.1 5505288 D 383372 CDS YP_001434311.1 156744182 5541777 5506695..5508233 1 NC_009767.1 PFAM: sugar transferase; KEGG: rrs:RoseRS_3578 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase 5508233 5541777 Rcas_4266 Roseiflexus castenholzii DSM 13941 UDP-phosphate galactose phosphotransferase YP_001434311.1 5506695 D 383372 CDS YP_001434312.1 156744183 5541778 5508468..5509421 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3579 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5509421 5541778 Rcas_4267 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001434312.1 5508468 D 383372 CDS YP_001434313.1 156744184 5541779 5509423..5510934 1 NC_009767.1 PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_3580 O-antigen polymerase; O-antigen polymerase 5510934 5541779 Rcas_4268 Roseiflexus castenholzii DSM 13941 O-antigen polymerase YP_001434313.1 5509423 D 383372 CDS YP_001434314.1 156744185 5541780 5510919..5511872 1 NC_009767.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3581 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5511872 5541780 Rcas_4269 Roseiflexus castenholzii DSM 13941 NAD-dependent epimerase/dehydratase YP_001434314.1 5510919 D 383372 CDS YP_001434315.1 156744186 5541781 5511934..5513046 1 NC_009767.1 PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_3582 conserved hypothetical protein 374; hypothetical protein 5513046 5541781 Rcas_4270 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434315.1 5511934 D 383372 CDS YP_001434316.1 156744187 5541782 5513061..5514263 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3583 glycosyl transferase, group 1; group 1 glycosyl transferase 5514263 5541782 Rcas_4271 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001434316.1 5513061 D 383372 CDS YP_001434317.1 156744188 5541783 5514235..5514864 1 NC_009767.1 KEGG: rrs:RoseRS_3584 hypothetical protein; hypothetical protein 5514864 5541783 Rcas_4272 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434317.1 5514235 D 383372 CDS YP_001434318.1 156744189 5541784 5514957..5516561 1 NC_009767.1 PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_3585 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 5516561 5541784 Rcas_4273 Roseiflexus castenholzii DSM 13941 carbohydrate kinase FGGY YP_001434318.1 5514957 D 383372 CDS YP_001434319.1 156744190 5541785 complement(5516534..5517172) 1 NC_009767.1 PFAM: Tetratricopeptide TPR_4; KEGG: hypothetical protein; hypothetical protein 5517172 5541785 Rcas_4274 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434319.1 5516534 R 383372 CDS YP_001434320.1 156744191 5541786 complement(5517169..5518233) 1 NC_009767.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: rrs:RoseRS_3588 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 5518233 5541786 Rcas_4275 Roseiflexus castenholzii DSM 13941 DNA polymerase III subunit delta' YP_001434320.1 5517169 R 383372 CDS YP_001434321.1 156744192 5541787 5518311..5518697 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3589 response regulator receiver protein; response regulator receiver protein 5518697 5541787 Rcas_4276 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001434321.1 5518311 D 383372 CDS YP_001434322.1 156744193 5541788 complement(5518731..5520161) 1 NC_009767.1 PFAM: Beta-ketoacyl synthase; KEGG: rrs:RoseRS_3590 beta-ketoacyl synthase; beta-ketoacyl synthase 5520161 5541788 Rcas_4277 Roseiflexus castenholzii DSM 13941 beta-ketoacyl synthase YP_001434322.1 5518731 R 383372 CDS YP_001434323.1 156744194 5541789 complement(5520204..5521124) 1 NC_009767.1 KEGG: rrs:RoseRS_3591 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 5521124 5541789 Rcas_4278 Roseiflexus castenholzii DSM 13941 undecaprenol kinase YP_001434323.1 5520204 R 383372 CDS YP_001434324.1 156744195 5541790 5521528..5521893 1 NC_009767.1 KEGG: rrs:RoseRS_3592 hypothetical protein; hypothetical protein 5521893 5541790 Rcas_4279 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434324.1 5521528 D 383372 CDS YP_001434325.1 156744196 5541791 complement(5521903..5523033) 1 NC_009767.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: rrs:RoseRS_3593 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 5523033 5541791 Rcas_4280 Roseiflexus castenholzii DSM 13941 phospholipase D/transphosphatidylase YP_001434325.1 5521903 R 383372 CDS YP_001434326.1 156744197 5541792 complement(5523152..5524408) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3594 glycosyl transferase, group 1; group 1 glycosyl transferase 5524408 5541792 Rcas_4281 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001434326.1 5523152 R 383372 CDS YP_001434327.1 156744198 5541793 complement(5524417..5524857) 1 NC_009767.1 PFAM: diacylglycerol kinase; KEGG: rrs:RoseRS_3595 diacylglycerol kinase; diacylglycerol kinase 5524857 5541793 Rcas_4282 Roseiflexus castenholzii DSM 13941 diacylglycerol kinase YP_001434327.1 5524417 R 383372 CDS YP_001434328.1 156744199 5541794 complement(5524917..5525396) 1 NC_009767.1 PFAM: protein of unknown function UPF0054; KEGG: rrs:RoseRS_3596 protein of unknown function UPF0054; hypothetical protein 5525396 5541794 Rcas_4283 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434328.1 5524917 R 383372 CDS YP_001434329.1 156744200 5541795 complement(5525423..5527609) 1 NC_009767.1 KEGG: rrs:RoseRS_3597 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM extracellular region; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 5527609 5541795 Rcas_4284 Roseiflexus castenholzii DSM 13941 metal dependent phosphohydrolase YP_001434329.1 5525423 R 383372 CDS YP_001434330.1 156744201 5541796 complement(5527643..5528164) 1 NC_009767.1 KEGG: rrs:RoseRS_3598 GatB/YqeY domain protein; GatB/YqeY domain-containing protein 5528164 5541796 Rcas_4285 Roseiflexus castenholzii DSM 13941 GatB/YqeY domain-containing protein YP_001434330.1 5527643 R 383372 CDS YP_001434331.1 156744202 5541797 complement(5528196..5528828) 1 NC_009767.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 5528828 gmk 5541797 gmk Roseiflexus castenholzii DSM 13941 guanylate kinase YP_001434331.1 5528196 R 383372 CDS YP_001434332.1 156744203 5541798 5528871..5530622 1 NC_009767.1 PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: rrs:RoseRS_3600 fibronectin-binding A domain protein; fibronectin-binding A domain-containing protein 5530622 5541798 Rcas_4287 Roseiflexus castenholzii DSM 13941 fibronectin-binding A domain-containing protein YP_001434332.1 5528871 D 383372 CDS YP_001434333.1 156744204 5541799 complement(5530704..5530934) 1 NC_009767.1 KEGG: rrs:RoseRS_3601 hypothetical protein; hypothetical protein 5530934 5541799 Rcas_4288 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434333.1 5530704 R 383372 CDS YP_001434334.1 156744205 5541800 5531320..5531583 1 NC_009767.1 KEGG: rrs:RoseRS_3602 hypothetical protein; hypothetical protein 5531583 5541800 Rcas_4289 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434334.1 5531320 D 383372 CDS YP_001434335.1 156744206 5541801 5531604..5533379 1 NC_009767.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_3603 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 5533379 5541801 Rcas_4290 Roseiflexus castenholzii DSM 13941 acetyl-CoA carboxylase, biotin carboxylase YP_001434335.1 5531604 D 383372 CDS YP_001434336.1 156744207 5541802 5533395..5534282 1 NC_009767.1 PFAM: dihydrodipicolinate synthetase; KEGG: rrs:RoseRS_3604 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 5534282 5541802 Rcas_4291 Roseiflexus castenholzii DSM 13941 dihydrodipicolinate synthetase YP_001434336.1 5533395 D 383372 CDS YP_001434337.1 156744208 5541804 5535489..5537108 1 NC_009767.1 KEGG: rrs:RoseRS_1243 hypothetical protein; hypothetical protein 5537108 5541804 Rcas_4293 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434337.1 5535489 D 383372 CDS YP_001434338.1 156744209 5541805 complement(5537644..5538861) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3605 glycosyl transferase, group 1; group 1 glycosyl transferase 5538861 5541805 Rcas_4294 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001434338.1 5537644 R 383372 CDS YP_001434339.1 156744210 5541806 complement(5538882..5539652) 1 NC_009767.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3606 haloacid dehalogenase domain protein hydrolase; hydrolase 5539652 5541806 Rcas_4295 Roseiflexus castenholzii DSM 13941 hydrolase YP_001434339.1 5538882 R 383372 CDS YP_001434340.1 156744211 5541807 complement(5541065..5542390) 1 NC_009767.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_3607 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 5542390 5541807 Rcas_4296 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434340.1 5541065 R 383372 CDS YP_001434341.1 156744212 5541808 5542796..5544706 1 NC_009767.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: mxa:MXAN_3847 transporter; TrkA domain-containing protein 5544706 5541808 Rcas_4297 Roseiflexus castenholzii DSM 13941 TrkA domain-containing protein YP_001434341.1 5542796 D 383372 CDS YP_001434342.1 156744213 5541809 complement(5544837..5545520) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3608 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5545520 5541809 Rcas_4298 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001434342.1 5544837 R 383372 CDS YP_001434343.1 156744214 5541810 5546101..5547174 1 NC_009767.1 PFAM: sodium/calcium exchanger membrane region; KEGG: rrs:RoseRS_3609 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region 5547174 5541810 Rcas_4299 Roseiflexus castenholzii DSM 13941 sodium/calcium exchanger membrane region YP_001434343.1 5546101 D 383372 CDS YP_001434344.1 156744215 5541811 5547415..5548524 1 NC_009767.1 TIGRFAM: phosphate binding protein; KEGG: rrs:RoseRS_3610 phosphate binding protein; phosphate binding protein 5548524 5541811 Rcas_4300 Roseiflexus castenholzii DSM 13941 phosphate binding protein YP_001434344.1 5547415 D 383372 CDS YP_001434345.1 156744216 5541812 5548521..5550260 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3611 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 5550260 5541812 Rcas_4301 Roseiflexus castenholzii DSM 13941 integral membrane sensor signal transduction histidine kinase YP_001434345.1 5548521 D 383372 CDS YP_001434346.1 156744217 5541813 5550274..5550648 1 NC_009767.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3612 response regulator receiver protein; response regulator receiver protein 5550648 5541813 Rcas_4302 Roseiflexus castenholzii DSM 13941 response regulator receiver protein YP_001434346.1 5550274 D 383372 CDS YP_001434347.1 156744218 5541814 5550822..5552360 1 NC_009767.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: rrs:RoseRS_0222 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 5552360 5541814 Rcas_4303 Roseiflexus castenholzii DSM 13941 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_001434347.1 5550822 D 383372 CDS YP_001434348.1 156744219 5541815 5552513..5554120 1 NC_009767.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_0224 protoheme IX farnesyltransferase; protoheme IX farnesyltransferase 5554120 5541815 Rcas_4304 Roseiflexus castenholzii DSM 13941 protoheme IX farnesyltransferase YP_001434348.1 5552513 D 383372 CDS YP_001434349.1 156744220 5541816 5554341..5555879 1 NC_009767.1 PFAM: sulfatase; KEGG: rrs:RoseRS_3340 sulfatase; sulfatase 5555879 5541816 Rcas_4305 Roseiflexus castenholzii DSM 13941 sulfatase YP_001434349.1 5554341 D 383372 CDS YP_001434350.1 156744221 5541817 5555888..5556760 1 NC_009767.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rrs:RoseRS_3339 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 5556760 5541817 Rcas_4306 Roseiflexus castenholzii DSM 13941 prolipoprotein diacylglyceryl transferase YP_001434350.1 5555888 D 383372 CDS YP_001434351.1 156744222 5541818 5556845..5558251 1 NC_009767.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: rrs:RoseRS_3337 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 5558251 5541818 Rcas_4307 Roseiflexus castenholzii DSM 13941 type I phosphodiesterase/nucleotide pyrophosphatase YP_001434351.1 5556845 D 383372 CDS YP_001434352.1 156744223 5541819 5558266..5559975 1 NC_009767.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase 5559975 5541819 Rcas_4308 Roseiflexus castenholzii DSM 13941 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase YP_001434352.1 5558266 D 383372 CDS YP_001434353.1 156744224 5541820 5561179..5562081 1 NC_009767.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_3335 PHP C-terminal domain protein; phosphotransferase domain-containing protein 5562081 5541820 Rcas_4309 Roseiflexus castenholzii DSM 13941 phosphotransferase domain-containing protein YP_001434353.1 5561179 D 383372 CDS YP_001434354.1 156744225 5541821 5562089..5563009 1 NC_009767.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 5563009 miaA 5541821 miaA Roseiflexus castenholzii DSM 13941 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001434354.1 5562089 D 383372 CDS YP_001434355.1 156744226 5541823 complement(5563469..5563960) 1 NC_009767.1 KEGG: rrs:RoseRS_4066 hypothetical protein; hypothetical protein 5563960 5541823 Rcas_4312 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434355.1 5563469 R 383372 CDS YP_001434356.1 156744227 5541824 complement(5563964..5565187) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3333 major facilitator superfamily MFS_1; major facilitator transporter 5565187 5541824 Rcas_4313 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001434356.1 5563964 R 383372 CDS YP_001434357.1 156744228 5541825 complement(5565199..5566311) 1 NC_009767.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3332 glycosyl transferase, group 1; group 1 glycosyl transferase 5566311 5541825 Rcas_4314 Roseiflexus castenholzii DSM 13941 group 1 glycosyl transferase YP_001434357.1 5565199 R 383372 CDS YP_001434358.1 156744229 5541826 5566412..5567617 1 NC_009767.1 TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; KEGG: rrs:RoseRS_3331 cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 5567617 5541826 Rcas_4315 Roseiflexus castenholzii DSM 13941 cysteinyl-tRNA synthetase YP_001434358.1 5566412 D 383372 CDS YP_001434359.1 156744230 5541828 complement(5568428..5568850) 1 NC_009767.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 5568850 rplL 5541828 rplL Roseiflexus castenholzii DSM 13941 50S ribosomal protein L7/L12 YP_001434359.1 5568428 R 383372 CDS YP_001434360.1 156744231 5541829 complement(5568930..5569493) 1 NC_009767.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 5569493 rplJ 5541829 rplJ Roseiflexus castenholzii DSM 13941 50S ribosomal protein L10 YP_001434360.1 5568930 R 383372 CDS YP_001434361.1 156744232 5541830 complement(5569715..5570437) 1 NC_009767.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 5570437 rplA 5541830 rplA Roseiflexus castenholzii DSM 13941 50S ribosomal protein L1 YP_001434361.1 5569715 R 383372 CDS YP_001434362.1 156744233 5541831 complement(5570488..5570913) 1 NC_009767.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 5570913 rplK 5541831 rplK Roseiflexus castenholzii DSM 13941 50S ribosomal protein L11 YP_001434362.1 5570488 R 383372 CDS YP_001434363.1 156744234 5541832 complement(5570933..5571517) 1 NC_009767.1 KEGG: rrs:RoseRS_3325 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides Ouzounis Woese) domain protein; NusG antitermination factor 5571517 5541832 Rcas_4321 Roseiflexus castenholzii DSM 13941 NusG antitermination factor YP_001434363.1 5570933 R 383372 CDS YP_001434364.1 156744235 5541833 complement(5571541..5571795) 1 NC_009767.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: rrs:RoseRS_3324 preprotein translocase, SecE subunit; preprotein translocase subunit SecE 5571795 5541833 Rcas_4322 Roseiflexus castenholzii DSM 13941 preprotein translocase subunit SecE YP_001434364.1 5571541 R 383372 CDS YP_001434365.1 156744236 5541834 complement(5571911..5573116) 1 NC_009767.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 5573116 5541834 Rcas_4323 Roseiflexus castenholzii DSM 13941 elongation factor Tu YP_001434365.1 5571911 R 383372 CDS YP_001434366.1 156744237 5541837 complement(5573471..5574496) 1 NC_009767.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_0216 glyoxylate reductase; glyoxylate reductase 5574496 5541837 Rcas_4324 Roseiflexus castenholzii DSM 13941 glyoxylate reductase YP_001434366.1 5573471 R 383372 CDS YP_001434367.1 156744238 5541838 complement(5574447..5575061) 1 NC_009767.1 KEGG: rrs:RoseRS_0215 hypothetical protein; hypothetical protein 5575061 5541838 Rcas_4325 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434367.1 5574447 R 383372 CDS YP_001434368.1 156744239 5541839 5575146..5576837 1 NC_009767.1 KEGG: rrs:RoseRS_0214 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 5576837 5541839 Rcas_4326 Roseiflexus castenholzii DSM 13941 methylmalonyl-CoA mutase large subunit YP_001434368.1 5575146 D 383372 CDS YP_001434369.1 156744240 5541840 5577109..5580174 1 NC_009767.1 PFAM: regulatory protein LuxR; KEGG: rrs:RoseRS_2963 regulatory protein, LuxR; ATP-dependent transcription regulator LuxR 5580174 5541840 Rcas_4327 Roseiflexus castenholzii DSM 13941 ATP-dependent transcription regulator LuxR YP_001434369.1 5577109 D 383372 CDS YP_001434370.1 156744241 5541841 5580887..5582179 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: bfs:BF2379 membrane protein; major facilitator transporter 5582179 5541841 Rcas_4328 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001434370.1 5580887 D 383372 CDS YP_001434371.1 156744242 5541842 5582490..5583656 1 NC_009767.1 KEGG: rrs:RoseRS_0213 hypothetical protein; hypothetical protein 5583656 5541842 Rcas_4329 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434371.1 5582490 D 383372 CDS YP_001434372.1 156744243 5541843 5583659..5584945 1 NC_009767.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5584945 5541843 Rcas_4330 Roseiflexus castenholzii DSM 13941 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001434372.1 5583659 D 383372 CDS YP_001434373.1 156744244 5541844 complement(5584946..5585401) 1 NC_009767.1 KEGG: rrs:RoseRS_0211 hypothetical protein; hypothetical protein 5585401 5541844 Rcas_4331 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434373.1 5584946 R 383372 CDS YP_001434374.1 156744245 5541845 5585470..5585829 1 NC_009767.1 KEGG: rrs:RoseRS_0210 hypothetical protein; hypothetical protein 5585829 5541845 Rcas_4332 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434374.1 5585470 D 383372 CDS YP_001434375.1 156744246 5541846 5586444..5586746 1 NC_009767.1 KEGG: rrs:RoseRS_0209 hypothetical protein; hypothetical protein 5586746 5541846 Rcas_4333 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434375.1 5586444 D 383372 CDS YP_001434376.1 156744247 5541847 complement(5586757..5588034) 1 NC_009767.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0208 histidine kinase; histidine kinase 5588034 5541847 Rcas_4334 Roseiflexus castenholzii DSM 13941 histidine kinase YP_001434376.1 5586757 R 383372 CDS YP_001434377.1 156744248 5541848 complement(5588040..5588651) 1 NC_009767.1 PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: rrs:RoseRS_0207 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 5588651 5541848 Rcas_4335 Roseiflexus castenholzii DSM 13941 phosphoribosyl-AMP cyclohydrolase YP_001434377.1 5588040 R 383372 CDS YP_001434378.1 156744249 5541849 complement(5588663..5590180) 1 NC_009767.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5590180 purH 5541849 purH Roseiflexus castenholzii DSM 13941 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001434378.1 5588663 R 383372 CDS YP_001434379.1 156744250 5541850 complement(5590165..5590473) 1 NC_009767.1 hypothetical protein 5590473 5541850 Rcas_4337 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434379.1 5590165 R 383372 CDS YP_001434380.1 156744251 5541851 complement(5590595..5591398) 1 NC_009767.1 KEGG: rrs:RoseRS_0201 hypothetical protein; hypothetical protein 5591398 5541851 Rcas_4338 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434380.1 5590595 R 383372 CDS YP_001434381.1 156744252 5541852 complement(5591458..5592033) 1 NC_009767.1 KEGG: rrs:RoseRS_0200 hypothetical protein; hypothetical protein 5592033 5541852 Rcas_4339 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434381.1 5591458 R 383372 CDS YP_001434382.1 156744253 5541853 complement(5592096..5592635) 1 NC_009767.1 PFAM: Roadblock/LC7 family protein; KEGG: rrs:RoseRS_0199 roadblock/LC7 family protein; roadblock/LC7 family protein 5592635 5541853 Rcas_4340 Roseiflexus castenholzii DSM 13941 roadblock/LC7 family protein YP_001434382.1 5592096 R 383372 CDS YP_001434383.1 156744254 5541854 complement(5593136..5593420) 1 NC_009767.1 KEGG: rrs:RoseRS_0198 hypothetical protein; hypothetical protein 5593420 5541854 Rcas_4341 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434383.1 5593136 R 383372 CDS YP_001434384.1 156744255 5541855 complement(5593742..5594185) 1 NC_009767.1 PFAM: heat shock protein Hsp20; KEGG: rrs:RoseRS_0197 heat shock protein HSP20; heat shock protein Hsp20 5594185 5541855 Rcas_4342 Roseiflexus castenholzii DSM 13941 heat shock protein Hsp20 YP_001434384.1 5593742 R 383372 CDS YP_001434385.1 156744256 5541856 5594309..5595979 1 NC_009767.1 KEGG: rrs:RoseRS_0196 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 5595979 5541856 Rcas_4343 Roseiflexus castenholzii DSM 13941 multi-sensor signal transduction histidine kinase YP_001434385.1 5594309 D 383372 CDS YP_001434386.1 156744257 5541857 5595993..5596712 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0195 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5596712 5541857 Rcas_4344 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001434386.1 5595993 D 383372 CDS YP_001434387.1 156744258 5541858 complement(5597810..5598574) 1 NC_009767.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: rrs:RoseRS_0194 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 5598574 5541858 Rcas_4345 Roseiflexus castenholzii DSM 13941 chromosome segregation and condensation protein ScpA YP_001434387.1 5597810 R 383372 CDS YP_001434388.1 156744259 5541859 complement(5598581..5599096) 1 NC_009767.1 KEGG: rrs:RoseRS_0193 hypothetical protein; hypothetical protein 5599096 5541859 Rcas_4346 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434388.1 5598581 R 383372 CDS YP_001434389.1 156744260 5541860 complement(5599127..5599408) 1 NC_009767.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rrs:RoseRS_0192 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 5599408 5541860 Rcas_4347 Roseiflexus castenholzii DSM 13941 transcriptional coactivator/pterin dehydratase YP_001434389.1 5599127 R 383372 CDS YP_001434390.1 156744261 5541861 complement(5599697..5600896) 1 NC_009767.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_0191 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 5600896 5541861 Rcas_4348 Roseiflexus castenholzii DSM 13941 RpoD family RNA polymerase sigma factor YP_001434390.1 5599697 R 383372 CDS YP_001434391.1 156744262 5541862 5601311..5602129 1 NC_009767.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 5602129 pyrF 5541862 pyrF Roseiflexus castenholzii DSM 13941 orotidine 5'-phosphate decarboxylase YP_001434391.1 5601311 D 383372 CDS YP_001434392.1 156744263 5541863 5602175..5602651 1 NC_009767.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 5602651 smpB 5541863 smpB Roseiflexus castenholzii DSM 13941 SsrA-binding protein YP_001434392.1 5602175 D 383372 CDS YP_001434393.1 156744264 5541864 complement(5602657..5603394) 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0188 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5603394 5541864 Rcas_4351 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001434393.1 5602657 R 383372 CDS YP_001434394.1 156744265 5541865 5603587..5604795 1 NC_009767.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0187 ATPase AAA-2 domain protein; ATPase 5604795 5541865 Rcas_4352 Roseiflexus castenholzii DSM 13941 ATPase YP_001434394.1 5603587 D 383372 CDS YP_001434395.1 156744266 5541866 5605418..5605801 1 NC_009767.1 KEGG: bfs:BF0554 hypothetical protein; hypothetical protein 5605801 5541866 Rcas_4353 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434395.1 5605418 D 383372 CDS YP_001434396.1 156744267 5541867 complement(5606188..5606880) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0180 ABC transporter related; ABC transporter-like protein 5606880 5541867 Rcas_4354 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001434396.1 5606188 R 383372 CDS YP_001434397.1 156744268 5541868 complement(5606899..5607888) 1 NC_009767.1 KEGG: rrs:RoseRS_0179 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: ABC transporter related; SpoVT/AbrB domain protein; SMART: AAA ATPase; AbrB family transcriptional regulator 5607888 5541868 Rcas_4355 Roseiflexus castenholzii DSM 13941 AbrB family transcriptional regulator YP_001434397.1 5606899 R 383372 CDS YP_001434398.1 156744269 5541869 complement(5607920..5610841) 1 NC_009767.1 PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_0178 protein of unknown function DUF214; hypothetical protein 5610841 5541869 Rcas_4356 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434398.1 5607920 R 383372 CDS YP_001434399.1 156744270 5541870 complement(5611043..5612587) 1 NC_009767.1 PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: rrs:RoseRS_0177 secretion protein HlyD family protein; H+transporting two-sector ATPase delta/subunit epsilon 5612587 5541870 Rcas_4357 Roseiflexus castenholzii DSM 13941 H+transporting two-sector ATPase delta/subunit epsilon YP_001434399.1 5611043 R 383372 CDS YP_001434400.1 156744271 5541871 complement(5612649..5613929) 1 NC_009767.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_0176 major facilitator superfamily MFS_1; major facilitator transporter 5613929 5541871 Rcas_4358 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001434400.1 5612649 R 383372 CDS YP_001434401.1 156744272 5541872 5614128..5615093 1 NC_009767.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_0175 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 5615093 5541872 Rcas_4359 Roseiflexus castenholzii DSM 13941 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001434401.1 5614128 D 383372 CDS YP_001434402.1 156744273 5541873 5615486..5616472 1 NC_009767.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: rrs:RoseRS_0174 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM 5616472 5541873 Rcas_4360 Roseiflexus castenholzii DSM 13941 cobalamin (vitamin B12) biosynthesis protein CbiM YP_001434402.1 5615486 D 383372 CDS YP_001434403.1 156744274 5541874 5616477..5617286 1 NC_009767.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rrs:RoseRS_0170 cobalt ABC transporter, inner membrane subunit CbiQ; cobalt ABC transporter inner membrane subunit CbiQ 5617286 5541874 Rcas_4361 Roseiflexus castenholzii DSM 13941 cobalt ABC transporter inner membrane subunit CbiQ YP_001434403.1 5616477 D 383372 CDS YP_001434404.1 156744275 5541875 5617680..5618876 1 NC_009767.1 PFAM: cytochrome P450; KEGG: rrs:RoseRS_0765 cytochrome P450; cytochrome P450 5618876 5541875 Rcas_4362 Roseiflexus castenholzii DSM 13941 cytochrome P450 YP_001434404.1 5617680 D 383372 CDS YP_001434405.1 156744276 5541876 complement(5618873..5619583) 1 NC_009767.1 PFAM: iron dependent repressor; KEGG: rrs:RoseRS_3574 iron dependent repressor; DtxR family iron dependent repressor 5619583 5541876 Rcas_4363 Roseiflexus castenholzii DSM 13941 DtxR family iron dependent repressor YP_001434405.1 5618873 R 383372 CDS YP_001434406.1 156744277 5541877 complement(5619846..5620379) 1 NC_009767.1 KEGG: rrs:RoseRS_3573 hypothetical protein; hypothetical protein 5620379 5541877 Rcas_4364 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434406.1 5619846 R 383372 CDS YP_001434407.1 156744278 5541878 complement(5620376..5620792) 1 NC_009767.1 KEGG: rrs:RoseRS_3572 hypothetical protein; hypothetical protein 5620792 5541878 Rcas_4365 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434407.1 5620376 R 383372 CDS YP_001434408.1 156744279 5541879 complement(5621157..5622137) 1 NC_009767.1 PFAM: transport system permease; KEGG: rrs:RoseRS_3571 transport system permease; transport system permease 5622137 5541879 Rcas_4366 Roseiflexus castenholzii DSM 13941 transport system permease YP_001434408.1 5621157 R 383372 CDS YP_001434409.1 156744280 5541880 complement(5622258..5622617) 1 NC_009767.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rrs:RoseRS_3570 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 5622617 5541880 Rcas_4367 Roseiflexus castenholzii DSM 13941 antibiotic biosynthesis monooxygenase YP_001434409.1 5622258 R 383372 CDS YP_001434410.1 156744281 5541881 complement(5622650..5622961) 1 NC_009767.1 KEGG: rrs:RoseRS_3569 hypothetical protein; hypothetical protein 5622961 5541881 Rcas_4368 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434410.1 5622650 R 383372 CDS YP_001434411.1 156744282 5541882 complement(5622958..5623923) 1 NC_009767.1 PFAM: cytochrome c assembly protein; KEGG: rrs:RoseRS_3568 cytochrome c assembly protein; cytochrome c assembly protein 5623923 5541882 Rcas_4369 Roseiflexus castenholzii DSM 13941 cytochrome c assembly protein YP_001434411.1 5622958 R 383372 CDS YP_001434412.1 156744283 5541883 complement(5624091..5624474) 1 NC_009767.1 KEGG: rrs:RoseRS_3567 hypothetical protein; hypothetical protein 5624474 5541883 Rcas_4370 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434412.1 5624091 R 383372 CDS YP_001434413.1 156744284 5541884 complement(5624492..5625568) 1 NC_009767.1 PFAM: transport system permease; KEGG: rrs:RoseRS_3566 transport system permease; transport system permease 5625568 5541884 Rcas_4371 Roseiflexus castenholzii DSM 13941 transport system permease YP_001434413.1 5624492 R 383372 CDS YP_001434414.1 156744285 5541885 complement(5625565..5626653) 1 NC_009767.1 PFAM: periplasmic binding protein; KEGG: rrs:RoseRS_3565 periplasmic binding protein; periplasmic binding protein 5626653 5541885 Rcas_4372 Roseiflexus castenholzii DSM 13941 periplasmic binding protein YP_001434414.1 5625565 R 383372 CDS YP_001434415.1 156744286 5541886 complement(5626634..5627449) 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3564 ABC transporter related; ABC transporter-like protein 5627449 5541886 Rcas_4373 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001434415.1 5626634 R 383372 CDS YP_001434416.1 156744287 5541887 complement(5627847..5628515) 1 NC_009767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_3837 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5628515 5541887 Rcas_4374 Roseiflexus castenholzii DSM 13941 N-acetyltransferase GCN5 YP_001434416.1 5627847 R 383372 CDS YP_001434417.1 156744288 5541888 complement(5628515..5629801) 1 NC_009767.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: rrs:RoseRS_4164 isocitrate lyase; isocitrate lyase 5629801 5541888 Rcas_4375 Roseiflexus castenholzii DSM 13941 isocitrate lyase YP_001434417.1 5628515 R 383372 CDS YP_001434418.1 156744289 5541889 complement(5629822..5631393) 1 NC_009767.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 5631393 5541889 Rcas_4376 Roseiflexus castenholzii DSM 13941 malate synthase YP_001434418.1 5629822 R 383372 CDS YP_001434419.1 156744290 5541894 5634450..5634866 1 NC_009767.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: ana:alr4952 hypothetical protein; twitching motility protein PilT 5634866 5541894 Rcas_4381 Roseiflexus castenholzii DSM 13941 twitching motility protein PilT YP_001434419.1 5634450 D 383372 CDS YP_001434420.1 156744291 5541895 5634987..5635214 1 NC_009767.1 KEGG: rrs:RoseRS_2013 hypothetical protein; hypothetical protein 5635214 5541895 Rcas_4382 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434420.1 5634987 D 383372 CDS YP_001434421.1 156744292 5541898 complement(5636811..5637677) 1 NC_009767.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: rrs:RoseRS_4019 formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD 5637677 5541898 Rcas_4385 Roseiflexus castenholzii DSM 13941 formate dehydrogenase family accessory protein FdhD YP_001434421.1 5636811 R 383372 CDS YP_001434422.1 156744293 5541899 complement(5637822..5640050) 1 NC_009767.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rrs:RoseRS_4018 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit 5640050 5541899 Rcas_4386 Roseiflexus castenholzii DSM 13941 oxidoreductase alpha (molybdopterin) subunit YP_001434422.1 5637822 R 383372 CDS YP_001434423.1 156744294 5541900 complement(5640513..5640881) 1 NC_009767.1 PFAM: protein of unknown function DUF45; KEGG: rrs:RoseRS_2686 protein of unknown function DUF45; hypothetical protein 5640881 5541900 Rcas_4387 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434423.1 5640513 R 383372 CDS YP_001434424.1 156744295 5541901 complement(5640878..5641039) 1 NC_009767.1 KEGG: rrs:RoseRS_2687 type I site-specific deoxyribonuclease, HsdR family; HsdR family type I site-specific deoxyribonuclease 5641039 5541901 Rcas_4388 Roseiflexus castenholzii DSM 13941 HsdR family type I site-specific deoxyribonuclease YP_001434424.1 5640878 R 383372 CDS YP_001434425.1 156744296 5541902 5641245..5642426 1 NC_009767.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_3729 radical SAM domain protein; radical SAM domain-containing protein 5642426 5541902 Rcas_4389 Roseiflexus castenholzii DSM 13941 radical SAM domain-containing protein YP_001434425.1 5641245 D 383372 CDS YP_001434426.1 156744297 5541903 5642910..5643989 1 NC_009767.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: rrs:RoseRS_3462 heat-inducible transcription repressor HrcA; heat-inducible transcription repressor HrcA 5643989 5541903 Rcas_4390 Roseiflexus castenholzii DSM 13941 heat-inducible transcription repressor HrcA YP_001434426.1 5642910 D 383372 CDS YP_001434427.1 156744298 5541904 5644020..5644634 1 NC_009767.1 PFAM: GrpE protein; KEGG: rrs:RoseRS_3461 GrpE protein; heat shock protein GrpE 5644634 5541904 Rcas_4391 Roseiflexus castenholzii DSM 13941 heat shock protein GrpE YP_001434427.1 5644020 D 383372 CDS YP_001434428.1 156744299 5541905 5644627..5646474 1 NC_009767.1 KEGG: rrs:RoseRS_3460 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 5646474 5541905 Rcas_4392 Roseiflexus castenholzii DSM 13941 molecular chaperone DnaK YP_001434428.1 5644627 D 383372 CDS YP_001434429.1 156744300 5541906 5646494..5647606 1 NC_009767.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rrs:RoseRS_3459 chaperone protein DnaJ; chaperone protein DnaJ 5647606 5541906 Rcas_4393 Roseiflexus castenholzii DSM 13941 chaperone protein DnaJ YP_001434429.1 5646494 D 383372 CDS YP_001434430.1 156744301 5541907 5647624..5648370 1 NC_009767.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rrs:RoseRS_3458 RNA methyltransferase, TrmH family, group 3; RNA methyltransferase 5648370 5541907 Rcas_4394 Roseiflexus castenholzii DSM 13941 RNA methyltransferase YP_001434430.1 5647624 D 383372 CDS YP_001434431.1 156744302 5541908 5648346..5648711 1 NC_009767.1 KEGG: rrs:RoseRS_3457 DNA polymerase, beta domain protein region; hypothetical protein 5648711 5541908 Rcas_4395 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434431.1 5648346 D 383372 CDS YP_001434432.1 156744303 5541909 complement(5648846..5649802) 1 NC_009767.1 TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: mfa:Mfla_0410 integron integrase; integron integrase 5649802 5541909 Rcas_4396 Roseiflexus castenholzii DSM 13941 integron integrase YP_001434432.1 5648846 R 383372 CDS YP_001434433.1 156744304 5541910 5650058..5651485 1 NC_009767.1 KEGG: rrs:RoseRS_2284 hypothetical protein; hypothetical protein 5651485 5541910 Rcas_4397 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434433.1 5650058 D 383372 CDS YP_001434434.1 156744305 5541911 5651490..5652284 1 NC_009767.1 KEGG: xoo:XOO0608 endonuclease; endonuclease 5652284 5541911 Rcas_4398 Roseiflexus castenholzii DSM 13941 endonuclease YP_001434434.1 5651490 D 383372 CDS YP_001434435.1 156744306 5541912 5652461..5653153 1 NC_009767.1 hypothetical protein 5653153 5541912 Rcas_4399 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434435.1 5652461 D 383372 CDS YP_001434436.1 156744307 5541913 5653360..5653629 1 NC_009767.1 KEGG: sma:SAV4429 hypothetical protein; hypothetical protein 5653629 5541913 Rcas_4400 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434436.1 5653360 D 383372 CDS YP_001434437.1 156744308 5541916 5654413..5655054 1 NC_009767.1 TIGRFAM: metal dependent phophohydrolase; KEGG: rrs:RoseRS_3456 metal dependent phophohydrolase; metal dependent phophohydrolase 5655054 5541916 Rcas_4403 Roseiflexus castenholzii DSM 13941 metal dependent phophohydrolase YP_001434437.1 5654413 D 383372 CDS YP_001434438.1 156744309 5541917 complement(5655326..5656294) 1 NC_009767.1 PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3455 PfkB domain protein; ribokinase-like domain-containing protein 5656294 5541917 Rcas_4404 Roseiflexus castenholzii DSM 13941 ribokinase-like domain-containing protein YP_001434438.1 5655326 R 383372 CDS YP_001434439.1 156744310 5541918 complement(5656302..5657411) 1 NC_009767.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_3454 oxidoreductase domain protein; oxidoreductase domain-containing protein 5657411 5541918 Rcas_4405 Roseiflexus castenholzii DSM 13941 oxidoreductase domain-containing protein YP_001434439.1 5656302 R 383372 CDS YP_001434440.1 156744311 5541919 complement(5657871..5658524) 1 NC_009767.1 KEGG: rrs:RoseRS_3453 hypothetical protein; hypothetical protein 5658524 5541919 Rcas_4406 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434440.1 5657871 R 383372 CDS YP_001434441.1 156744312 5541920 5658915..5659508 1 NC_009767.1 KEGG: rrs:RoseRS_3452 signal transduction histidine kinase, LytS; signal transduction histidine kinase, LytS 5659508 5541920 Rcas_4407 Roseiflexus castenholzii DSM 13941 signal transduction histidine kinase, LytS YP_001434441.1 5658915 D 383372 CDS YP_001434442.1 156744313 5541921 5659522..5660304 1 NC_009767.1 PFAM: cobalt transport protein; KEGG: rrs:RoseRS_3451 cobalt transport protein; cobalt transport protein 5660304 5541921 Rcas_4408 Roseiflexus castenholzii DSM 13941 cobalt transport protein YP_001434442.1 5659522 D 383372 CDS YP_001434443.1 156744314 5541922 5660362..5662068 1 NC_009767.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3450 ABC transporter related; ABC transporter-like protein 5662068 5541922 Rcas_4409 Roseiflexus castenholzii DSM 13941 ABC transporter-like protein YP_001434443.1 5660362 D 383372 CDS YP_001434444.1 156744315 5541923 5662150..5663232 1 NC_009767.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3449 tetratricopeptide TPR_2 repeat protein; hypothetical protein 5663232 5541923 Rcas_4410 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434444.1 5662150 D 383372 CDS YP_001434445.1 156744316 5541924 5663229..5664692 1 NC_009767.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: rrs:RoseRS_3446 deoxyribodipyrimidine photo-lyase; deoxyribodipyrimidine photo-lyase 5664692 5541924 Rcas_4411 Roseiflexus castenholzii DSM 13941 deoxyribodipyrimidine photo-lyase YP_001434445.1 5663229 D 383372 CDS YP_001434446.1 156744317 5541925 5665141..5667504 1 NC_009767.1 PFAM: protein of unknown function DUF88; KEGG: rrs:RoseRS_3445 protein of unknown function DUF88; hypothetical protein 5667504 5541925 Rcas_4412 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434446.1 5665141 D 383372 CDS YP_001434447.1 156744318 5541926 5667527..5668165 1 NC_009767.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: rrs:RoseRS_3444 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 5668165 5541926 Rcas_4413 Roseiflexus castenholzii DSM 13941 phosphoribosylanthranilate isomerase YP_001434447.1 5667527 D 383372 CDS YP_001434448.1 156744319 5541927 5668170..5669552 1 NC_009767.1 KEGG: rrs:RoseRS_3443 metallophosphoesterase; metallophosphoesterase 5669552 5541927 Rcas_4414 Roseiflexus castenholzii DSM 13941 metallophosphoesterase YP_001434448.1 5668170 D 383372 CDS YP_001434449.1 156744320 5541928 5669719..5670084 1 NC_009767.1 PFAM: protein of unknown function DUF343; KEGG: rrs:RoseRS_3442 protein of unknown function DUF343; hypothetical protein 5670084 5541928 Rcas_4415 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434449.1 5669719 D 383372 CDS YP_001434450.1 156744321 5541929 5670214..5670999 1 NC_009767.1 PFAM: protein of unknown function DUF540; KEGG: rrs:RoseRS_3441 protein of unknown function DUF540; hypothetical protein 5670999 5541929 Rcas_4416 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434450.1 5670214 D 383372 CDS YP_001434451.1 156744322 5541930 5671757..5672803 1 NC_009767.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rrs:RoseRS_3440 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 5672803 5541930 Rcas_4417 Roseiflexus castenholzii DSM 13941 TRAP transporter solute receptor TAXI family protein YP_001434451.1 5671757 D 383372 CDS YP_001434452.1 156744323 5541931 5673061..5675346 1 NC_009767.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rrs:RoseRS_3439 TRAP transporter, 4TM/12TM fusion protein; TRAP transporter, 4TM/12TM fusion protein 5675346 5541931 Rcas_4418 Roseiflexus castenholzii DSM 13941 TRAP transporter, 4TM/12TM fusion protein YP_001434452.1 5673061 D 383372 CDS YP_001434453.1 156744324 5541932 complement(5676480..5679611) 1 NC_009767.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: rrs:RoseRS_3438 excinuclease ABC, A subunit; excinuclease ABC subunit A 5679611 5541932 Rcas_4419 Roseiflexus castenholzii DSM 13941 excinuclease ABC subunit A YP_001434453.1 5676480 R 383372 CDS YP_001434454.1 156744325 5541933 5680114..5681841 1 NC_009767.1 KEGG: swo:Swol_1757 hypothetical protein; hypothetical protein 5681841 5541933 Rcas_4420 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434454.1 5680114 D 383372 CDS YP_001434455.1 156744326 5541934 complement(5682248..5683552) 1 NC_009767.1 PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3435 major facilitator superfamily MFS_1; major facilitator transporter 5683552 5541934 Rcas_4421 Roseiflexus castenholzii DSM 13941 major facilitator transporter YP_001434455.1 5682248 R 383372 CDS YP_001434456.1 156744327 5541935 complement(5684675..5685646) 1 NC_009767.1 PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_3434 pyridoxal 4-dehydrogenase; aldo/keto reductase 5685646 5541935 Rcas_4422 Roseiflexus castenholzii DSM 13941 aldo/keto reductase YP_001434456.1 5684675 R 383372 CDS YP_001434457.1 156744328 5541936 complement(5686364..5687617) 1 NC_009767.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: rrs:RoseRS_0455 protein of unknown function DUF418; hypothetical protein 5687617 5541936 Rcas_4423 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434457.1 5686364 R 383372 CDS YP_001434458.1 156744329 5541937 5688342..5691509 1 NC_009767.1 PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4327 transcriptional activator domain; transcriptional activator domain-containing protein 5691509 5541937 Rcas_4424 Roseiflexus castenholzii DSM 13941 transcriptional activator domain-containing protein YP_001434458.1 5688342 D 383372 CDS YP_001434459.1 156744330 5541938 5691650..5692216 1 NC_009767.1 PFAM: YceI family protein; KEGG: rrs:RoseRS_4326 YceI family protein; hypothetical protein 5692216 5541938 Rcas_4425 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434459.1 5691650 D 383372 CDS YP_001434460.1 156744331 5541939 complement(5692164..5694242) 1 NC_009767.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rrs:RoseRS_4325 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 5694242 5541939 Rcas_4426 Roseiflexus castenholzii DSM 13941 5-oxoprolinase YP_001434460.1 5692164 R 383372 CDS YP_001434461.1 156744332 5541940 complement(5694242..5696104) 1 NC_009767.1 KEGG: rrs:RoseRS_4324 hypothetical protein; hypothetical protein 5696104 5541940 Rcas_4427 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434461.1 5694242 R 383372 CDS YP_001434462.1 156744333 5541941 complement(5696451..5697146) 1 NC_009767.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Helix-turn-helix type 11 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4323 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 5697146 5541941 Rcas_4428 Roseiflexus castenholzii DSM 13941 two component LuxR family transcriptional regulator YP_001434462.1 5696451 R 383372 CDS YP_001434463.1 156744334 5541942 complement(5697498..5698790) 1 NC_009767.1 PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_0747 extracellular solute-binding protein, family 1; extracellular solute-binding protein 5698790 5541942 Rcas_4429 Roseiflexus castenholzii DSM 13941 extracellular solute-binding protein YP_001434463.1 5697498 R 383372 CDS YP_001434464.1 156744335 5541943 complement(5699048..5699974) 1 NC_009767.1 PFAM: peptidase T2 asparaginase 2; KEGG: rrs:RoseRS_0748 asparaginase; asparaginase 5699974 5541943 Rcas_4430 Roseiflexus castenholzii DSM 13941 asparaginase YP_001434464.1 5699048 R 383372 CDS YP_001434465.1 156744336 5541944 complement(5699971..5700858) 1 NC_009767.1 PFAM: UbiE/COQ5 methyltransferase; Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0749 methyltransferase type 11; type 11 methyltransferase 5700858 5541944 Rcas_4431 Roseiflexus castenholzii DSM 13941 type 11 methyltransferase YP_001434465.1 5699971 R 383372 CDS YP_001434466.1 156744337 5541945 complement(5700842..5702101) 1 NC_009767.1 PFAM: Beta-ketoacyl synthase; KEGG: rrs:RoseRS_0750 beta-ketoacyl synthase; beta-ketoacyl synthase 5702101 5541945 Rcas_4432 Roseiflexus castenholzii DSM 13941 beta-ketoacyl synthase YP_001434466.1 5700842 R 383372 CDS YP_001434467.1 156744338 5541946 complement(5702098..5702382) 1 NC_009767.1 hypothetical protein 5702382 5541946 Rcas_4433 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434467.1 5702098 R 383372 CDS YP_001434468.1 156744339 5541947 complement(5702579..5703604) 1 NC_009767.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_0752 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 5703604 5541947 Rcas_4434 Roseiflexus castenholzii DSM 13941 alcohol dehydrogenase YP_001434468.1 5702579 R 383372 CDS YP_001434469.1 156744340 5541948 5704362..5704988 1 NC_009767.1 KEGG: rrs:RoseRS_0753 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA 5704988 5541948 Rcas_4435 Roseiflexus castenholzii DSM 13941 heme exporter protein CcmA YP_001434469.1 5704362 D 383372 CDS YP_001434470.1 156744341 5541949 5705050..5705796 1 NC_009767.1 PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: rrs:RoseRS_0754 cytochrome c-type biogenesis protein CcmB; cytochrome c-type biogenesis protein CcmB 5705796 5541949 Rcas_4436 Roseiflexus castenholzii DSM 13941 cytochrome c-type biogenesis protein CcmB YP_001434470.1 5705050 D 383372 CDS YP_001434471.1 156744342 5541950 5705854..5706861 1 NC_009767.1 PFAM: cytochrome c assembly protein; KEGG: rrs:RoseRS_0755 cytochrome c assembly protein; cytochrome c assembly protein 5706861 5541950 Rcas_4437 Roseiflexus castenholzii DSM 13941 cytochrome c assembly protein YP_001434471.1 5705854 D 383372 CDS YP_001434472.1 156744343 5541951 5706845..5707075 1 NC_009767.1 KEGG: rrs:RoseRS_0756 hypothetical protein; hypothetical protein 5707075 5541951 Rcas_4438 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434472.1 5706845 D 383372 CDS YP_001434473.1 156744344 5541952 5707100..5707522 1 NC_009767.1 KEGG: rrs:RoseRS_0757 hypothetical protein; hypothetical protein 5707522 5541952 Rcas_4439 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434473.1 5707100 D 383372 CDS YP_001434474.1 156744345 5541953 5707668..5710031 1 NC_009767.1 PFAM: cytochrome c assembly protein; KEGG: rrs:RoseRS_0758 cytochrome c assembly protein; cytochrome c assembly protein 5710031 5541953 Rcas_4440 Roseiflexus castenholzii DSM 13941 cytochrome c assembly protein YP_001434474.1 5707668 D 383372 CDS YP_001434475.1 156744346 5541954 5710033..5710998 1 NC_009767.1 PFAM: heat shock protein DnaJ domain protein; KEGG: rrs:RoseRS_0759 heat shock protein DnaJ domain protein; molecular chaperone DnaJ 5710998 5541954 Rcas_4441 Roseiflexus castenholzii DSM 13941 molecular chaperone DnaJ YP_001434475.1 5710033 D 383372 CDS YP_001434476.1 156744347 5541955 complement(5711107..5711637) 1 NC_009767.1 PFAM: PilT protein domain protein; KEGG: sfu:Sfum_1407 PilT protein domain protein; twitching motility protein PilT 5711637 5541955 Rcas_4442 Roseiflexus castenholzii DSM 13941 twitching motility protein PilT YP_001434476.1 5711107 R 383372 CDS YP_001434477.1 156744348 5541956 complement(5711634..5711852) 1 NC_009767.1 KEGG: sfu:Sfum_1406 prevent-host-death family protein; prevent-host-death family protein 5711852 5541956 Rcas_4443 Roseiflexus castenholzii DSM 13941 prevent-host-death family protein YP_001434477.1 5711634 R 383372 CDS YP_001434478.1 156744349 5541957 5712293..5712883 1 NC_009767.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_0760 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 5712883 5541957 Rcas_4444 Roseiflexus castenholzii DSM 13941 alkyl hydroperoxide reductase YP_001434478.1 5712293 D 383372 CDS YP_001434479.1 156744350 5541958 5712968..5713657 1 NC_009767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0761 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5713657 5541958 Rcas_4445 Roseiflexus castenholzii DSM 13941 two component transcriptional regulator YP_001434479.1 5712968 D 383372 CDS YP_001434480.1 156744351 5541959 5713675..5714856 1 NC_009767.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 5714856 5541959 Rcas_4446 Roseiflexus castenholzii DSM 13941 gamma-glutamyl kinase YP_001434480.1 5713675 D 383372 CDS YP_001434481.1 156744352 5541960 5714901..5716172 1 NC_009767.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 5716172 proA 5541960 proA Roseiflexus castenholzii DSM 13941 gamma-glutamyl phosphate reductase YP_001434481.1 5714901 D 383372 CDS YP_001434482.1 156744353 5541961 complement(5716197..5717003) 1 NC_009767.1 PFAM: dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_0764 dihydroorotate dehydrogenase family protein; dihydroorotate dehydrogenase 5717003 5541961 Rcas_4448 Roseiflexus castenholzii DSM 13941 dihydroorotate dehydrogenase YP_001434482.1 5716197 R 383372 CDS YP_001434483.1 156744354 5541962 5717148..5718353 1 NC_009767.1 PFAM: cytochrome P450; KEGG: rrs:RoseRS_0765 cytochrome P450; cytochrome P450 5718353 5541962 Rcas_4449 Roseiflexus castenholzii DSM 13941 cytochrome P450 YP_001434483.1 5717148 D 383372 CDS YP_001434484.1 156744355 5541963 complement(5718373..5719275) 1 NC_009767.1 KEGG: rrs:RoseRS_0766 hypothetical protein; hypothetical protein 5719275 5541963 Rcas_4450 Roseiflexus castenholzii DSM 13941 hypothetical protein YP_001434484.1 5718373 R 383372 CDS YP_001434485.1 156744356 5541964 5719492..5721435 1 NC_009767.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rrs:RoseRS_4627 GAF sensor signal transduction histidine kinase; signal transduction histidine kinase 5721435 5541964 Rcas_4451 Roseiflexus castenholzii DSM 13941 signal transduction histidine kinase YP_001434485.1 5719492 D 383372 CDS YP_001434486.1 156744357 5541965 5721435..5722556 1 NC_009767.1 PFAM: creatinase; peptidase M24; KEGG: rrs:RoseRS_4628 peptidase M24; peptidase M24 5722556 5541965 Rcas_4452 Roseiflexus castenholzii DSM 13941 peptidase M24 YP_001434486.1 5721435 D 383372 CDS YP_001434487.1 156744358 5541966 5722662..5723225 1 NC_009767.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rrs:RoseRS_4629 transcriptional regulator; segregation and condensation protein B 5723225 5541966 Rcas_4453 Roseiflexus castenholzii DSM 13941 segregation and condensation protein B YP_001434487.1 5722662 D 383372 CDS